Query 002189
Match_columns 955
No_of_seqs 849 out of 6414
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:11:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002189.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002189hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-53 7.1E-58 464.5 19.3 260 628-905 13-290 (299)
2 4aoj_A High affinity nerve gro 100.0 5.3E-53 1.8E-57 467.7 22.8 260 628-905 41-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 6.4E-53 2.2E-57 462.6 17.5 256 629-902 27-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 9.1E-52 3.1E-56 451.5 24.0 259 628-903 36-299 (307)
5 4ase_A Vascular endothelial gr 100.0 4.8E-51 1.6E-55 455.6 20.6 269 621-906 57-349 (353)
6 4b9d_A Serine/threonine-protei 100.0 1.4E-50 4.7E-55 448.3 17.8 251 628-898 24-277 (350)
7 4fih_A Serine/threonine-protei 100.0 3.2E-50 1.1E-54 444.7 20.5 250 628-898 74-324 (346)
8 4g3f_A NF-kappa-beta-inducing 100.0 9.6E-50 3.3E-54 439.7 19.7 257 628-907 58-319 (336)
9 3hmm_A TGF-beta receptor type- 100.0 8.6E-50 2.9E-54 438.7 18.3 267 629-908 4-301 (303)
10 3fpq_A Serine/threonine-protei 100.0 1.7E-49 5.8E-54 430.5 19.9 247 631-898 29-283 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-49 4E-54 433.7 18.0 250 628-898 32-285 (311)
12 4fie_A Serine/threonine-protei 100.0 4.6E-49 1.6E-53 446.1 22.9 250 628-898 151-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 4.7E-48 1.6E-52 415.4 21.7 246 628-898 13-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.7E-48 5.7E-53 424.7 13.5 247 628-897 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 3E-47 1E-51 416.5 19.2 252 627-898 4-280 (299)
16 4f9c_A Cell division cycle 7-r 100.0 1E-44 3.5E-49 407.2 21.3 265 624-898 17-353 (361)
17 4b99_A Mitogen-activated prote 100.0 2.6E-44 9E-49 408.2 23.5 264 628-898 54-345 (398)
18 2qkw_B Protein kinase; three-h 100.0 6.9E-44 2.4E-48 396.5 24.8 281 618-905 29-316 (321)
19 3uim_A Brassinosteroid insensi 100.0 2.2E-43 7.4E-48 393.3 19.9 284 613-901 15-308 (326)
20 3uto_A Twitchin; kinase, muscl 100.0 3.5E-43 1.2E-47 418.4 21.7 253 627-898 156-411 (573)
21 3v5w_A G-protein coupled recep 100.0 9.4E-43 3.2E-47 411.2 18.8 247 628-898 189-450 (689)
22 4eco_A Uncharacterized protein 100.0 6.5E-43 2.2E-47 424.5 14.7 360 24-390 28-520 (636)
23 4ecn_A Leucine-rich repeat pro 100.0 3.1E-42 1.1E-46 425.8 20.2 393 23-429 266-818 (876)
24 2nru_A Interleukin-1 receptor- 100.0 3.2E-41 1.1E-45 372.4 26.0 280 615-903 12-305 (307)
25 3fxz_A Serine/threonine-protei 100.0 1.9E-41 6.5E-46 372.5 22.6 251 627-898 19-270 (297)
26 3rgz_A Protein brassinosteroid 100.0 4.3E-42 1.5E-46 426.8 19.2 351 20-378 6-387 (768)
27 2psq_A Fibroblast growth facto 100.0 9.2E-42 3.1E-46 386.9 19.1 262 627-906 80-366 (370)
28 3p86_A Serine/threonine-protei 100.0 2.7E-41 9.3E-46 373.4 21.4 263 626-906 35-300 (309)
29 2c30_A Serine/threonine-protei 100.0 6.3E-41 2.2E-45 372.6 24.3 262 616-898 23-295 (321)
30 3kul_A Ephrin type-A receptor 100.0 3E-41 1E-45 375.9 19.9 260 628-906 49-315 (325)
31 3vhe_A Vascular endothelial gr 100.0 2.5E-41 8.5E-46 381.9 19.2 272 618-906 12-357 (359)
32 2qol_A Ephrin receptor; recept 100.0 3.3E-41 1.1E-45 382.7 19.0 261 628-907 45-312 (373)
33 3s95_A LIMK-1, LIM domain kina 100.0 4.6E-41 1.6E-45 371.8 19.7 258 628-906 10-284 (310)
34 3soc_A Activin receptor type-2 100.0 2.9E-41 1E-45 375.5 18.2 264 627-906 23-320 (322)
35 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-41 4E-46 387.3 15.1 260 627-905 113-375 (377)
36 3ugc_A Tyrosine-protein kinase 100.0 1.4E-41 4.6E-46 373.2 14.1 271 628-905 10-292 (295)
37 4hcu_A Tyrosine-protein kinase 100.0 5.5E-41 1.9E-45 363.2 18.1 257 628-905 10-267 (269)
38 2izr_A Casein kinase I isoform 100.0 3.5E-40 1.2E-44 368.2 24.7 271 628-916 9-293 (330)
39 4eqm_A Protein kinase; transfe 100.0 2.3E-40 7.8E-45 363.4 22.0 262 627-905 10-276 (294)
40 3tt0_A Basic fibroblast growth 100.0 1.2E-40 4.3E-45 379.6 20.6 264 627-908 68-356 (382)
41 3tki_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 371.1 19.4 254 627-898 6-262 (323)
42 3fe3_A MAP/microtubule affinit 100.0 1.5E-40 5.2E-45 370.2 20.3 248 627-898 14-265 (328)
43 3zgw_A Maternal embryonic leuc 100.0 1.8E-40 6.2E-45 371.9 20.9 250 627-898 9-261 (347)
44 3l9p_A Anaplastic lymphoma kin 100.0 2.3E-41 8E-46 383.2 13.2 262 628-907 71-348 (367)
45 1t46_A HOMO sapiens V-KIT hard 100.0 3.1E-40 1.1E-44 365.3 21.3 263 627-906 22-309 (313)
46 1qcf_A Haematopoetic cell kina 100.0 5.8E-41 2E-45 391.0 16.0 257 626-903 186-443 (454)
47 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-40 4.4E-45 368.5 17.9 262 627-906 22-313 (314)
48 1k9a_A Carboxyl-terminal SRC k 100.0 2.8E-40 9.5E-45 384.7 21.5 253 627-905 192-446 (450)
49 1luf_A Muscle-specific tyrosin 100.0 1.1E-40 3.8E-45 374.1 17.3 263 626-906 45-337 (343)
50 1csn_A Casein kinase-1; phosph 100.0 1.5E-39 5.1E-44 357.1 25.6 265 628-909 10-288 (298)
51 3gen_A Tyrosine-protein kinase 100.0 1.8E-40 6.1E-45 361.9 17.9 258 627-905 23-281 (283)
52 2yab_A Death-associated protei 100.0 9.6E-40 3.3E-44 368.3 24.2 252 627-898 11-273 (361)
53 1rjb_A FL cytokine receptor; k 100.0 2.1E-40 7.2E-45 372.1 18.7 263 627-906 44-336 (344)
54 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-40 4.3E-45 360.0 16.3 257 627-904 7-264 (268)
55 3qup_A Tyrosine-protein kinase 100.0 1.5E-40 5.2E-45 369.8 17.4 266 627-910 22-304 (323)
56 3poz_A Epidermal growth factor 100.0 1.6E-40 5.4E-45 370.5 17.3 257 628-904 15-278 (327)
57 3lb7_A RAF proto-oncogene seri 100.0 9.1E-40 3.1E-44 360.9 23.1 261 628-905 36-301 (307)
58 2y0a_A Death-associated protei 100.0 1.6E-39 5.6E-44 362.0 25.0 252 627-898 10-272 (326)
59 3q4u_A Activin receptor type-1 100.0 3.7E-40 1.3E-44 362.5 19.2 258 627-902 7-300 (301)
60 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-40 4.5E-45 387.6 16.4 258 627-905 183-441 (452)
61 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-40 3.9E-45 392.4 15.3 257 627-903 219-477 (495)
62 3lxp_A Non-receptor tyrosine-p 100.0 5.9E-40 2E-44 364.4 20.2 271 630-906 33-312 (318)
63 2xir_A Vascular endothelial gr 100.0 4.9E-40 1.7E-44 364.2 19.4 272 619-907 18-313 (316)
64 1tki_A Titin; serine kinase, m 100.0 1.5E-39 5E-44 361.5 23.2 252 627-898 4-258 (321)
65 3op5_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 372.6 19.3 280 627-916 34-341 (364)
66 3dtc_A Mitogen-activated prote 100.0 6.4E-40 2.2E-44 355.0 19.7 253 628-902 7-271 (271)
67 1o6l_A RAC-beta serine/threoni 100.0 7.8E-40 2.7E-44 365.6 20.9 248 628-898 5-261 (337)
68 3lxl_A Tyrosine-protein kinase 100.0 1.8E-40 6.1E-45 370.0 15.1 275 628-906 23-305 (327)
69 4e5w_A Tyrosine-protein kinase 100.0 2.6E-40 8.8E-45 364.1 16.1 272 628-903 21-301 (302)
70 1qpc_A LCK kinase; alpha beta 100.0 7.9E-40 2.7E-44 356.0 19.7 259 628-907 13-272 (279)
71 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-39 4.7E-44 357.8 21.3 249 628-898 13-293 (298)
72 4aw2_A Serine/threonine-protei 100.0 2.6E-40 9E-45 381.3 16.2 264 619-898 65-339 (437)
73 3o0g_A Cell division protein k 100.0 1.5E-39 5.1E-44 356.5 21.3 264 628-898 2-283 (292)
74 2pvf_A Fibroblast growth facto 100.0 1.4E-39 4.8E-44 363.9 21.5 263 627-907 34-321 (334)
75 3dbq_A Dual specificity protei 100.0 7.8E-40 2.7E-44 367.4 19.4 252 628-899 9-275 (343)
76 2bdw_A Hypothetical protein K1 100.0 2.6E-39 8.9E-44 365.5 23.8 254 625-898 26-285 (362)
77 1ob3_A PFPK5, cell division co 100.0 1.7E-39 5.8E-44 355.3 21.4 263 628-898 2-281 (288)
78 3kfa_A Tyrosine-protein kinase 100.0 7.8E-40 2.7E-44 357.7 18.4 260 627-906 12-273 (288)
79 3niz_A Rhodanese family protei 100.0 1.2E-39 4E-44 360.8 19.9 265 627-898 20-301 (311)
80 3kex_A Receptor tyrosine-prote 100.0 5.4E-40 1.8E-44 365.9 17.1 257 628-904 13-276 (325)
81 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-39 4.9E-44 356.1 20.1 260 627-903 23-287 (289)
82 3kmu_A ILK, integrin-linked ki 100.0 1.1E-39 3.7E-44 352.8 18.9 253 628-903 10-269 (271)
83 1kob_A Twitchin; kinase, intra 100.0 2.8E-39 9.7E-44 367.7 23.2 253 627-898 50-305 (387)
84 1ogq_A PGIP-2, polygalacturona 100.0 9.1E-40 3.1E-44 361.8 18.6 292 22-370 2-302 (313)
85 1mp8_A Focal adhesion kinase 1 100.0 8.3E-40 2.8E-44 356.4 18.0 259 627-906 14-278 (281)
86 2eva_A TAK1 kinase - TAB1 chim 100.0 2E-39 6.9E-44 358.2 21.2 256 628-906 8-265 (307)
87 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-39 4.5E-44 366.3 20.0 251 627-898 52-306 (349)
88 3soa_A Calcium/calmodulin-depe 100.0 2.4E-39 8.1E-44 374.7 22.3 255 625-898 8-268 (444)
89 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.2E-40 3.1E-44 367.5 18.3 249 627-898 22-281 (353)
90 4euu_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 356.7 24.0 270 628-903 9-308 (319)
91 4fvq_A Tyrosine-protein kinase 100.0 5.2E-40 1.8E-44 359.2 15.4 255 628-908 8-279 (289)
92 3qd2_B Eukaryotic translation 100.0 1.1E-39 3.7E-44 363.8 18.1 253 626-898 4-326 (332)
93 3t9t_A Tyrosine-protein kinase 100.0 8.6E-40 2.9E-44 353.1 16.6 257 628-905 8-265 (267)
94 3v8s_A RHO-associated protein 100.0 4.6E-40 1.6E-44 376.4 15.3 260 620-898 61-330 (410)
95 3ork_A Serine/threonine protei 100.0 2E-39 7E-44 358.8 19.5 259 627-902 11-279 (311)
96 2jii_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 367.3 17.8 269 628-910 42-342 (352)
97 1p4o_A Insulin-like growth fac 100.0 3E-40 1E-44 367.2 12.6 264 622-903 19-298 (322)
98 1u59_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 352.5 20.9 262 629-910 10-278 (287)
99 4dc2_A Protein kinase C IOTA t 100.0 2.6E-39 8.8E-44 368.2 20.4 251 627-898 51-319 (396)
100 3mdy_A Bone morphogenetic prot 100.0 4.5E-39 1.5E-43 359.9 22.0 274 620-908 29-335 (337)
101 2ozo_A Tyrosine-protein kinase 100.0 5.7E-39 1.9E-43 386.9 24.5 256 635-910 343-604 (613)
102 1fot_A TPK1 delta, CAMP-depend 100.0 4.8E-39 1.6E-43 356.5 21.8 245 628-898 6-259 (318)
103 2x4f_A Myosin light chain kina 100.0 3.5E-39 1.2E-43 365.8 21.0 248 632-898 93-343 (373)
104 3c0i_A Peripheral plasma membr 100.0 3.1E-39 1.1E-43 363.6 20.2 254 627-898 23-287 (351)
105 2i1m_A Macrophage colony-stimu 100.0 1.9E-39 6.6E-44 362.5 18.3 262 627-905 45-327 (333)
106 2zmd_A Dual specificity protei 100.0 2.2E-39 7.6E-44 369.9 19.2 251 628-898 56-321 (390)
107 2wqm_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 352.7 23.7 264 628-908 32-301 (310)
108 2pmi_A Negative RE, cyclin-dep 100.0 4.7E-39 1.6E-43 356.9 20.5 265 627-898 4-294 (317)
109 3lzb_A Epidermal growth factor 100.0 3.8E-39 1.3E-43 359.2 19.8 257 628-904 15-278 (327)
110 3a62_A Ribosomal protein S6 ki 100.0 4.7E-39 1.6E-43 358.5 20.5 249 627-898 16-277 (327)
111 2h8h_A Proto-oncogene tyrosine 100.0 4.2E-40 1.4E-44 391.2 12.4 257 627-904 266-523 (535)
112 3gni_B Strad alpha; kinase fol 100.0 2.3E-39 8E-44 370.1 17.9 268 628-898 25-334 (389)
113 3hko_A Calcium/calmodulin-depe 100.0 5.8E-39 2E-43 360.5 20.5 261 623-898 21-331 (345)
114 3uc3_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 364.7 18.5 250 627-898 19-275 (361)
115 1xjd_A Protein kinase C, theta 100.0 2.1E-39 7.3E-44 363.1 16.8 251 625-898 14-270 (345)
116 3a8x_A Protein kinase C IOTA t 100.0 4.6E-39 1.6E-43 360.9 19.4 250 628-898 9-276 (345)
117 4f0f_A Serine/threonine-protei 100.0 7.1E-39 2.4E-43 350.0 20.4 253 628-901 19-286 (287)
118 4hgt_A Casein kinase I isoform 100.0 1E-38 3.6E-43 349.9 21.7 268 626-910 7-286 (296)
119 2yex_A Serine/threonine-protei 100.0 6.2E-39 2.1E-43 348.1 19.6 255 626-898 5-262 (276)
120 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-38 4.6E-43 345.9 22.2 252 626-898 7-262 (277)
121 3uzp_A CKI-delta, CKID, casein 100.0 2E-38 6.8E-43 347.8 23.6 266 627-909 8-285 (296)
122 2a19_B Interferon-induced, dou 100.0 6.1E-39 2.1E-43 349.5 19.2 250 626-905 9-275 (284)
123 3g33_A Cell division protein k 100.0 1.5E-38 5.2E-43 351.2 22.6 265 626-898 7-297 (308)
124 3p1a_A MYT1 kinase, membrane-a 100.0 2.4E-39 8.2E-44 358.3 16.1 246 627-898 56-305 (311)
125 2yfx_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 361.7 15.3 263 627-907 29-307 (327)
126 3c1x_A Hepatocyte growth facto 100.0 3.2E-39 1.1E-43 366.0 17.3 260 629-907 90-358 (373)
127 3brb_A Proto-oncogene tyrosine 100.0 5.1E-39 1.7E-43 355.8 18.5 263 626-906 32-310 (313)
128 2w1i_A JAK2; chromosomal rearr 100.0 2.4E-39 8.3E-44 360.7 15.8 271 628-905 41-323 (326)
129 3f66_A Hepatocyte growth facto 100.0 7.1E-39 2.4E-43 352.0 19.2 261 628-906 25-293 (298)
130 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-38 3.6E-43 358.6 20.7 245 628-898 41-294 (350)
131 3pls_A Macrophage-stimulating 100.0 9.9E-39 3.4E-43 350.6 20.1 260 630-907 23-290 (298)
132 2a2a_A Death-associated protei 100.0 2.1E-38 7.2E-43 352.3 22.9 252 627-898 11-273 (321)
133 1mqb_A Ephrin type-A receptor 100.0 7.8E-39 2.7E-43 357.7 19.5 260 628-906 44-311 (333)
134 1byg_A CSK, protein (C-termina 100.0 3.8E-39 1.3E-43 350.5 16.4 254 627-906 20-275 (278)
135 2vd5_A DMPK protein; serine/th 100.0 2.7E-39 9.1E-44 370.3 15.9 264 618-898 51-328 (412)
136 3cc6_A Protein tyrosine kinase 100.0 6.2E-39 2.1E-43 349.4 17.9 258 627-905 11-274 (281)
137 1fvr_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 355.3 20.5 259 628-907 25-303 (327)
138 4fr4_A YANK1, serine/threonine 100.0 4.8E-39 1.6E-43 364.8 17.6 247 628-897 15-271 (384)
139 2v62_A Serine/threonine-protei 100.0 8.8E-39 3E-43 359.1 19.6 264 628-902 37-326 (345)
140 3llt_A Serine/threonine kinase 100.0 3.6E-39 1.2E-43 364.5 16.5 273 615-898 22-356 (360)
141 1xbb_A Tyrosine-protein kinase 100.0 9E-39 3.1E-43 350.0 19.2 258 628-906 16-281 (291)
142 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.5E-39 8.6E-44 361.2 14.9 246 628-898 9-259 (336)
143 2eue_A Carbon catabolite derep 100.0 1.9E-38 6.4E-43 344.4 21.3 246 628-898 13-263 (275)
144 1u5q_A Serine/threonine protei 100.0 4.3E-39 1.5E-43 361.7 16.7 246 628-898 54-306 (348)
145 1b6c_B TGF-B superfamily recep 100.0 1.2E-38 4.2E-43 357.2 20.4 273 618-908 32-340 (342)
146 4fl3_A Tyrosine-protein kinase 100.0 9.3E-39 3.2E-43 386.0 20.7 251 634-905 375-632 (635)
147 4agu_A Cyclin-dependent kinase 100.0 1.8E-38 6.2E-43 351.0 21.3 264 627-898 2-285 (311)
148 2i0e_A Protein kinase C-beta I 100.0 1E-38 3.6E-43 358.7 19.5 249 627-898 19-277 (353)
149 4ejn_A RAC-alpha serine/threon 100.0 5E-39 1.7E-43 374.1 17.4 249 627-898 147-405 (446)
150 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-38 3.8E-43 361.3 19.5 254 627-906 64-341 (365)
151 3lm5_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 353.7 20.9 263 618-898 18-288 (327)
152 2acx_A G protein-coupled recep 100.0 9.4E-39 3.2E-43 377.0 19.1 252 627-898 183-445 (576)
153 3g2f_A Bone morphogenetic prot 100.0 1.6E-38 5.6E-43 355.4 20.0 263 628-908 13-322 (336)
154 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-38 3.8E-43 357.3 18.7 251 626-898 20-278 (342)
155 4eut_A Serine/threonine-protei 100.0 2E-38 6.9E-43 363.0 20.8 273 628-906 9-311 (396)
156 3kk8_A Calcium/calmodulin depe 100.0 3.4E-38 1.1E-42 344.0 21.5 252 627-898 5-262 (284)
157 3oz6_A Mitogen-activated prote 100.0 7.7E-39 2.6E-43 365.6 16.8 266 625-898 6-329 (388)
158 2clq_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 345.2 21.9 252 629-898 23-279 (295)
159 1nxk_A MAP kinase-activated pr 100.0 1.2E-38 4.1E-43 364.9 18.3 250 628-899 61-323 (400)
160 3dls_A PAS domain-containing s 100.0 1.2E-38 4E-43 356.4 17.7 244 625-898 21-275 (335)
161 2r5t_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 360.6 18.1 243 628-893 38-285 (373)
162 2y94_A 5'-AMP-activated protei 100.0 3.5E-38 1.2E-42 367.3 22.4 247 628-898 16-267 (476)
163 3sv0_A Casein kinase I-like; t 100.0 8.2E-38 2.8E-42 364.8 25.4 266 627-909 6-283 (483)
164 2ac3_A MAP kinase-interacting 100.0 1.7E-38 6E-43 351.9 18.7 256 628-898 12-296 (316)
165 2h34_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 351.3 18.3 261 627-906 33-298 (309)
166 3kn6_A Ribosomal protein S6 ki 100.0 6.2E-39 2.1E-43 357.2 14.6 245 633-898 16-271 (325)
167 3ll6_A Cyclin G-associated kin 100.0 7.4E-39 2.5E-43 357.9 15.3 263 628-910 28-314 (337)
168 3bhy_A Death-associated protei 100.0 4.8E-38 1.6E-42 342.6 21.3 251 628-898 5-266 (283)
169 3ttj_A Mitogen-activated prote 100.0 3.7E-38 1.3E-42 367.5 21.7 260 627-898 61-356 (464)
170 3fdn_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 343.5 19.6 247 627-898 8-258 (279)
171 3i6u_A CDS1, serine/threonine- 100.0 2.4E-38 8.3E-43 364.8 19.5 254 625-898 132-400 (419)
172 2y7j_A Phosphorylase B kinase 100.0 7.8E-38 2.7E-42 354.0 23.3 259 620-898 86-360 (365)
173 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.2E-38 7.4E-43 353.5 18.5 263 627-898 33-319 (329)
174 3is5_A Calcium-dependent prote 100.0 2.4E-38 8.2E-43 345.6 18.4 252 627-898 21-279 (285)
175 3gxj_A TGF-beta receptor type- 100.0 1.5E-40 5.2E-45 365.9 0.9 262 627-906 2-299 (303)
176 1ua2_A CAK, cell division prot 100.0 4.8E-38 1.7E-42 353.3 21.3 267 624-898 6-292 (346)
177 1x8b_A WEE1HU, WEE1-like prote 100.0 5.7E-38 2E-42 342.3 19.9 246 626-898 9-280 (289)
178 2r3i_A Cell division protein k 100.0 8.2E-38 2.8E-42 343.6 21.2 264 628-898 3-284 (299)
179 4aaa_A Cyclin-dependent kinase 100.0 2.1E-38 7.2E-43 353.9 16.5 264 627-898 24-307 (331)
180 3rp9_A Mitogen-activated prote 100.0 3.2E-38 1.1E-42 368.7 18.6 194 628-827 53-280 (458)
181 3eqc_A Dual specificity mitoge 100.0 4.3E-38 1.5E-42 355.7 19.0 259 628-898 33-325 (360)
182 2jam_A Calcium/calmodulin-depe 100.0 4.1E-38 1.4E-42 347.1 18.2 251 627-898 8-262 (304)
183 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.4E-38 1.5E-42 370.6 19.6 251 628-898 185-449 (543)
184 2rku_A Serine/threonine-protei 100.0 6.9E-38 2.4E-42 343.4 19.7 248 628-898 15-266 (294)
185 3cok_A Serine/threonine-protei 100.0 1.9E-38 6.6E-43 344.8 15.1 249 628-898 11-263 (278)
186 3fme_A Dual specificity mitoge 100.0 4.1E-38 1.4E-42 344.3 17.8 252 627-898 6-267 (290)
187 2owb_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 350.5 19.6 248 628-898 41-292 (335)
188 3nsz_A CK II alpha, casein kin 100.0 1.1E-37 3.7E-42 347.8 21.3 257 628-898 36-320 (330)
189 2vgo_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 340.1 20.8 246 628-898 14-263 (284)
190 2buj_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 355.1 11.8 260 627-902 28-304 (317)
191 2pml_X PFPK7, Ser/Thr protein 100.0 2.8E-38 9.7E-43 355.2 16.7 264 627-898 30-323 (348)
192 1t4h_A Serine/threonine-protei 100.0 8.7E-38 3E-42 341.9 20.0 248 630-898 28-283 (290)
193 2wtk_C Serine/threonine-protei 100.0 1.8E-37 6.3E-42 341.8 22.3 253 626-898 3-264 (305)
194 3a7i_A MST3 kinase, serine/thr 100.0 2.4E-37 8.4E-42 340.6 23.3 250 628-900 22-273 (303)
195 1vzo_A Ribosomal protein S6 ki 100.0 2.1E-38 7.3E-43 357.3 15.1 250 628-898 54-322 (355)
196 3mtl_A Cell division protein k 100.0 1.6E-38 5.6E-43 353.7 13.5 263 628-898 2-282 (324)
197 2w5a_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 342.0 16.6 256 627-899 5-269 (279)
198 3eb0_A Putative uncharacterize 100.0 8.3E-38 2.8E-42 356.4 19.3 263 624-898 3-322 (383)
199 2x7f_A TRAF2 and NCK-interacti 100.0 2E-38 6.8E-43 353.1 13.9 259 620-898 16-287 (326)
200 3lij_A Calcium/calmodulin depe 100.0 1.2E-37 4.1E-42 367.1 21.3 251 627-898 36-292 (494)
201 3an0_A Dual specificity mitoge 100.0 4.4E-38 1.5E-42 352.6 16.8 252 627-898 50-311 (340)
202 3nyv_A Calmodulin-domain prote 100.0 6.9E-38 2.4E-42 368.5 19.0 251 627-898 25-282 (484)
203 3kvw_A DYRK2, dual specificity 100.0 1.2E-37 4.3E-42 359.9 20.6 261 627-898 96-409 (429)
204 2vwi_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 347.9 14.2 262 627-898 14-288 (303)
205 3cek_A Dual specificity protei 100.0 2.4E-38 8.1E-43 350.5 13.8 261 618-898 18-293 (313)
206 3pg1_A Mitogen-activated prote 100.0 6.3E-38 2.2E-42 354.6 17.5 272 618-898 12-317 (362)
207 3byv_A Rhoptry kinase; malaria 100.0 9.4E-39 3.2E-43 363.4 10.4 242 627-898 72-360 (377)
208 3n9x_A Phosphotransferase; mal 100.0 2E-37 6.7E-42 358.8 21.6 266 627-898 25-362 (432)
209 2j7t_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 345.9 15.5 253 627-898 18-276 (302)
210 2ycf_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 345.8 19.3 252 626-897 8-274 (322)
211 1u46_A ACK-1, activated CDC42 100.0 5.1E-38 1.7E-42 343.7 15.5 258 628-904 18-284 (291)
212 3mwu_A Calmodulin-domain prote 100.0 1.1E-37 3.7E-42 366.8 18.9 252 626-898 20-277 (486)
213 2h6d_A 5'-AMP-activated protei 100.0 2E-37 7E-42 336.3 19.6 247 628-898 11-262 (276)
214 3q5i_A Protein kinase; CDPK, m 100.0 4.2E-37 1.4E-41 363.4 23.8 251 627-898 35-302 (504)
215 3com_A Serine/threonine-protei 100.0 2.3E-37 7.8E-42 342.6 20.2 252 626-898 27-279 (314)
216 2xrw_A Mitogen-activated prote 100.0 2.2E-37 7.5E-42 351.3 20.3 259 628-898 25-319 (371)
217 1j1b_A Glycogen synthase kinas 100.0 1.8E-37 6.2E-42 357.7 19.8 258 629-898 55-337 (420)
218 1cm8_A Phosphorylated MAP kina 100.0 1.4E-37 4.7E-42 352.2 18.4 259 627-898 24-308 (367)
219 3rgz_A Protein brassinosteroid 100.0 6.6E-38 2.3E-42 389.1 17.2 318 64-390 294-711 (768)
220 1zy4_A Serine/threonine-protei 100.0 2.5E-37 8.7E-42 339.8 19.7 254 626-898 4-284 (303)
221 1phk_A Phosphorylase kinase; g 100.0 5E-37 1.7E-41 337.1 21.4 253 626-898 15-284 (298)
222 3mi9_A Cell division protein k 100.0 2.6E-37 8.8E-42 348.1 19.5 265 628-898 17-312 (351)
223 2fst_X Mitogen-activated prote 100.0 3E-37 1E-41 349.1 20.1 258 628-898 29-312 (367)
224 1z57_A Dual specificity protei 100.0 6.9E-37 2.4E-41 342.0 22.6 261 627-898 13-329 (339)
225 2j0j_A Focal adhesion kinase 1 100.0 3.4E-37 1.2E-41 373.7 21.6 259 627-906 389-653 (656)
226 1blx_A Cyclin-dependent kinase 100.0 4.4E-37 1.5E-41 342.2 20.3 265 626-898 9-297 (326)
227 4e7w_A Glycogen synthase kinas 100.0 1.5E-37 5.3E-42 355.3 16.9 260 628-898 40-322 (394)
228 3e3p_A Protein kinase, putativ 100.0 5.2E-37 1.8E-41 346.6 20.9 269 621-898 16-315 (360)
229 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-37 5.8E-42 377.5 18.1 250 626-898 339-598 (674)
230 3q60_A ROP5B; pseudokinase, tr 100.0 5.6E-38 1.9E-42 356.3 12.9 254 628-898 62-353 (371)
231 3qyz_A Mitogen-activated prote 100.0 7.6E-37 2.6E-41 346.0 20.8 264 627-898 26-314 (364)
232 1wak_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 352.0 18.9 262 627-898 36-392 (397)
233 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.4E-38 2.2E-42 347.8 11.7 260 627-907 32-305 (319)
234 2i6l_A Mitogen-activated prote 100.0 6.8E-37 2.3E-41 339.3 19.5 263 628-898 11-306 (320)
235 2vx3_A Dual specificity tyrosi 100.0 2.7E-36 9.3E-41 343.8 24.0 264 626-898 52-373 (382)
236 3rgf_A Cyclin-dependent kinase 100.0 1.2E-36 4E-41 349.6 21.0 264 629-898 21-334 (405)
237 4exu_A Mitogen-activated prote 100.0 1.8E-36 6.1E-41 343.8 22.2 258 627-898 41-324 (371)
238 3coi_A Mitogen-activated prote 100.0 3.2E-36 1.1E-40 339.4 22.7 257 628-898 24-306 (353)
239 2wei_A Calmodulin-domain prote 100.0 2.1E-36 7.1E-41 330.5 20.5 254 624-898 18-277 (287)
240 3aln_A Dual specificity mitoge 100.0 4.2E-37 1.5E-41 342.7 14.4 254 628-898 22-286 (327)
241 2eu9_A Dual specificity protei 100.0 4.5E-36 1.5E-40 337.9 22.3 262 627-898 18-334 (355)
242 3fhr_A MAP kinase-activated pr 100.0 1.3E-36 4.3E-41 340.2 17.4 251 627-898 27-288 (336)
243 2dyl_A Dual specificity mitoge 100.0 2.4E-36 8.1E-41 334.9 19.5 252 627-898 24-284 (318)
244 2b9h_A MAP kinase FUS3, mitoge 100.0 2.3E-36 8E-41 340.3 19.7 263 627-898 10-306 (353)
245 2iwi_A Serine/threonine-protei 100.0 1.2E-36 4.2E-41 336.5 16.8 245 623-898 26-284 (312)
246 2rio_A Serine/threonine-protei 100.0 2.5E-36 8.6E-41 349.6 19.8 250 630-897 17-295 (434)
247 3v47_A TOLL-like receptor 5B a 100.0 3.9E-36 1.3E-40 350.7 21.1 334 50-390 6-402 (455)
248 1q8y_A SR protein kinase; tran 100.0 3E-36 1E-40 342.0 18.5 261 628-898 19-334 (373)
249 3a99_A Proto-oncogene serine/t 100.0 7.4E-37 2.5E-41 339.7 12.3 247 621-898 36-294 (320)
250 3p23_A Serine/threonine-protei 100.0 9.5E-36 3.2E-40 343.9 17.3 250 628-898 24-284 (432)
251 2id5_A Lingo-1, leucine rich r 100.0 3.4E-35 1.2E-39 345.0 22.2 310 55-373 12-334 (477)
252 3t6q_A CD180 antigen; protein- 100.0 3.5E-34 1.2E-38 346.7 29.5 315 56-374 14-415 (606)
253 2pzi_A Probable serine/threoni 100.0 3.6E-35 1.2E-39 359.2 20.9 240 628-904 80-328 (681)
254 3qa8_A MGC80376 protein; kinas 100.0 3.2E-36 1.1E-40 358.7 10.6 273 628-906 14-311 (676)
255 3j0a_A TOLL-like receptor 5; m 100.0 1.7E-34 5.9E-39 362.1 25.4 336 55-390 15-536 (844)
256 4eco_A Uncharacterized protein 100.0 5.4E-35 1.9E-39 354.9 18.9 322 63-391 205-598 (636)
257 2z81_A CD282 antigen, TOLL-lik 100.0 6.8E-35 2.3E-39 348.7 18.9 312 54-376 4-468 (549)
258 3vq2_A TLR4, TOLL-like recepto 100.0 6.6E-34 2.3E-38 344.3 25.3 327 64-393 32-507 (606)
259 3uqc_A Probable conserved tran 100.0 2.8E-34 9.4E-39 313.5 18.6 230 628-905 31-266 (286)
260 1ziw_A TOLL-like receptor 3; i 100.0 4.2E-33 1.4E-37 342.0 29.4 338 52-391 2-462 (680)
261 3m2w_A MAP kinase-activated pr 100.0 2E-34 6.9E-39 316.8 15.7 227 628-898 17-257 (299)
262 3dzo_A Rhoptry kinase domain; 100.0 1.1E-34 3.8E-39 333.6 13.4 241 628-898 78-364 (413)
263 3vq2_A TLR4, TOLL-like recepto 100.0 8.1E-34 2.8E-38 343.6 21.2 326 64-393 56-531 (606)
264 3v47_A TOLL-like receptor 5B a 100.0 7.1E-34 2.4E-38 331.6 19.7 307 63-376 53-412 (455)
265 2vuw_A Serine/threonine-protei 100.0 5.8E-34 2E-38 318.6 18.1 243 628-898 20-332 (336)
266 3o6n_A APL1; leucine-rich repe 100.0 1.3E-33 4.6E-38 322.5 20.5 328 43-392 3-351 (390)
267 2id5_A Lingo-1, leucine rich r 100.0 6.2E-33 2.1E-37 325.7 25.5 319 58-389 6-326 (477)
268 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4E-33 1.4E-37 334.3 22.9 136 64-210 52-190 (562)
269 3oja_B Anopheles plasmodium-re 100.0 2.3E-33 7.8E-38 338.5 20.4 328 43-392 9-357 (597)
270 4ecn_A Leucine-rich repeat pro 100.0 2.5E-33 8.6E-38 346.4 20.3 312 64-391 448-838 (876)
271 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-33 4.4E-38 335.3 16.4 107 64-174 21-128 (520)
272 2z63_A TOLL-like receptor 4, v 100.0 4.6E-33 1.6E-37 334.2 20.3 324 64-392 52-503 (570)
273 2z63_A TOLL-like receptor 4, v 100.0 1.5E-32 5.2E-37 329.7 23.6 318 64-393 28-480 (570)
274 3t6q_A CD180 antigen; protein- 100.0 3.6E-32 1.2E-36 329.1 23.4 318 64-390 129-507 (606)
275 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9E-32 3.1E-36 322.5 25.5 306 67-391 34-481 (562)
276 2z7x_B TOLL-like receptor 1, v 100.0 2.1E-32 7.1E-37 324.9 18.5 314 67-391 3-452 (520)
277 1ziw_A TOLL-like receptor 3; i 100.0 1.5E-31 5E-36 328.3 26.2 321 65-391 223-592 (680)
278 1ogq_A PGIP-2, polygalacturona 100.0 2.8E-32 9.6E-37 301.7 16.3 242 88-389 50-297 (313)
279 2ft3_A Biglycan; proteoglycan, 100.0 2.5E-31 8.6E-36 296.7 21.7 277 52-369 31-330 (332)
280 1xku_A Decorin; proteoglycan, 100.0 5.7E-31 2E-35 293.5 22.4 285 68-370 35-330 (330)
281 4fcg_A Uncharacterized protein 100.0 5.9E-32 2E-36 301.0 14.3 272 25-350 26-315 (328)
282 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-31 4.3E-36 320.3 16.6 314 60-389 3-416 (549)
283 4g8a_A TOLL-like receptor 4; l 100.0 1.1E-30 3.7E-35 317.4 24.7 135 64-205 52-187 (635)
284 3j0a_A TOLL-like receptor 5; m 100.0 5.4E-31 1.9E-35 330.4 22.2 314 68-391 8-370 (844)
285 3o6n_A APL1; leucine-rich repe 100.0 3.5E-30 1.2E-34 294.2 23.0 286 64-375 69-355 (390)
286 1o6v_A Internalin A; bacterial 100.0 3E-30 1E-34 301.9 21.3 279 64-374 68-346 (466)
287 3oja_B Anopheles plasmodium-re 100.0 4.3E-30 1.5E-34 309.9 22.9 285 64-374 75-360 (597)
288 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-30 9.4E-35 288.3 19.5 283 65-391 34-328 (332)
289 2z66_A Variable lymphocyte rec 100.0 4E-30 1.4E-34 283.4 18.2 286 50-381 3-296 (306)
290 4fmz_A Internalin; leucine ric 100.0 6.2E-30 2.1E-34 287.2 19.9 296 64-390 44-340 (347)
291 1xku_A Decorin; proteoglycan, 100.0 1.4E-29 4.6E-34 282.4 22.3 283 89-390 32-326 (330)
292 4fmz_A Internalin; leucine ric 100.0 7.3E-30 2.5E-34 286.6 19.7 282 63-372 65-346 (347)
293 1o6v_A Internalin A; bacterial 100.0 1.1E-29 3.9E-34 296.9 21.0 296 64-393 46-341 (466)
294 3bz5_A Internalin-J, INLJ; leu 100.0 4.7E-29 1.6E-33 290.1 23.8 276 64-374 42-333 (457)
295 2z80_A TOLL-like receptor 2, v 100.0 5.2E-30 1.8E-34 288.6 14.3 283 52-353 28-318 (353)
296 3bz5_A Internalin-J, INLJ; leu 100.0 4.3E-29 1.5E-33 290.4 21.5 308 63-413 63-394 (457)
297 4g8a_A TOLL-like receptor 4; l 100.0 2E-29 6.7E-34 306.3 18.2 323 64-388 76-572 (635)
298 1ozn_A Reticulon 4 receptor; N 100.0 3.8E-28 1.3E-32 264.8 19.3 276 58-393 5-284 (285)
299 1jl5_A Outer protein YOPM; leu 100.0 2.5E-28 8.7E-33 283.6 17.0 274 64-376 11-334 (454)
300 3zyj_A Leucine-rich repeat-con 100.0 1.9E-27 6.6E-32 275.9 24.0 248 68-353 47-296 (440)
301 3zyi_A Leucine-rich repeat-con 100.0 1.9E-27 6.6E-32 276.9 23.1 249 69-354 59-308 (452)
302 1wwl_A Monocyte differentiatio 99.9 3.5E-29 1.2E-33 276.8 3.2 248 84-350 39-310 (312)
303 3g06_A SSPH2 (leucine-rich rep 99.9 5.9E-28 2E-32 289.2 13.9 284 45-380 14-305 (622)
304 4fcg_A Uncharacterized protein 99.9 1.2E-27 4E-32 266.2 14.1 239 86-376 79-318 (328)
305 3zyi_A Leucine-rich repeat-con 99.9 9.6E-27 3.3E-31 271.0 22.1 246 91-373 57-304 (452)
306 3o53_A Protein LRIM1, AGAP0063 99.9 3.1E-28 1.1E-32 269.8 8.3 267 90-378 12-282 (317)
307 1wwl_A Monocyte differentiatio 99.9 4.9E-29 1.7E-33 275.6 1.0 266 43-326 21-310 (312)
308 3zyj_A Leucine-rich repeat-con 99.9 1.6E-26 5.5E-31 268.2 21.1 247 90-373 45-293 (440)
309 1jl5_A Outer protein YOPM; leu 99.9 1E-26 3.4E-31 270.2 18.3 269 83-390 6-287 (454)
310 3o53_A Protein LRIM1, AGAP0063 99.9 1.2E-28 4E-33 273.2 0.9 272 62-355 8-282 (317)
311 4azs_A Methyltransferase WBDD; 99.9 1.4E-28 4.8E-33 292.7 1.5 185 635-830 241-437 (569)
312 1ozn_A Reticulon 4 receptor; N 99.9 3.6E-27 1.2E-31 257.0 11.6 110 64-174 32-142 (285)
313 2z80_A TOLL-like receptor 2, v 99.9 3E-27 1E-31 266.0 10.5 275 89-375 32-317 (353)
314 2z66_A Variable lymphocyte rec 99.9 2.1E-26 7.3E-31 253.6 16.4 247 91-374 10-263 (306)
315 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.8E-31 272.5 13.6 236 111-367 32-270 (487)
316 3oja_A Leucine-rich immune mol 99.9 8E-27 2.7E-31 273.6 5.1 239 84-344 30-270 (487)
317 2o6q_A Variable lymphocyte rec 99.9 8.9E-25 3E-29 236.1 19.9 211 55-325 6-218 (270)
318 2z62_A TOLL-like receptor 4, v 99.9 4E-24 1.4E-28 231.8 19.4 223 72-354 15-242 (276)
319 3en9_A Glycoprotease, O-sialog 99.9 1.4E-25 4.8E-30 265.4 7.9 185 631-831 339-538 (540)
320 3g06_A SSPH2 (leucine-rich rep 99.9 8.6E-24 2.9E-28 253.2 23.3 244 64-356 61-304 (622)
321 1z7x_W Ribonuclease inhibitor; 99.9 7.4E-29 2.5E-33 289.6 -20.3 304 65-372 29-383 (461)
322 2z62_A TOLL-like receptor 4, v 99.9 7.9E-24 2.7E-28 229.4 16.7 143 231-375 91-240 (276)
323 2o6q_A Variable lymphocyte rec 99.9 4.3E-23 1.5E-27 222.9 21.8 206 115-355 18-224 (270)
324 1z7x_W Ribonuclease inhibitor; 99.9 4.6E-27 1.6E-31 274.4 -12.4 327 64-394 56-441 (461)
325 1p9a_G Platelet glycoprotein I 99.9 8.2E-23 2.8E-27 222.9 18.9 205 109-352 6-211 (290)
326 4glp_A Monocyte differentiatio 99.9 1.2E-23 4E-28 232.2 11.4 203 138-350 92-308 (310)
327 3rfs_A Internalin B, repeat mo 99.9 7.1E-23 2.4E-27 221.4 16.9 227 111-381 17-244 (272)
328 3rfs_A Internalin B, repeat mo 99.9 2.2E-23 7.5E-28 225.5 12.9 204 109-355 37-241 (272)
329 2xwt_C Thyrotropin receptor; s 99.9 3.9E-23 1.3E-27 218.9 13.6 199 88-322 31-236 (239)
330 4glp_A Monocyte differentiatio 99.9 3.6E-23 1.2E-27 228.2 11.1 226 89-326 65-308 (310)
331 1p9a_G Platelet glycoprotein I 99.9 2.7E-22 9.2E-27 218.9 17.8 201 85-325 7-208 (290)
332 3m19_A Variable lymphocyte rec 99.9 1.7E-22 5.9E-27 215.6 15.4 189 52-301 4-193 (251)
333 1h6u_A Internalin H; cell adhe 99.9 5.6E-22 1.9E-26 218.4 16.4 198 109-353 37-234 (308)
334 1zar_A RIO2 kinase; serine kin 99.9 3.5E-22 1.2E-26 216.7 13.7 152 622-805 84-253 (282)
335 3goz_A Leucine-rich repeat-con 99.9 2.7E-24 9.4E-29 242.7 -3.6 257 68-351 2-299 (362)
336 4ay9_X Follicle-stimulating ho 99.9 1.4E-21 4.9E-26 219.2 17.3 246 52-347 7-257 (350)
337 2xwt_C Thyrotropin receptor; s 99.9 6.7E-22 2.3E-26 209.4 13.6 196 114-346 32-236 (239)
338 3m19_A Variable lymphocyte rec 99.9 4.2E-21 1.4E-25 204.9 17.8 181 114-353 15-196 (251)
339 2ast_B S-phase kinase-associat 99.9 3.9E-24 1.3E-28 238.6 -6.2 262 55-357 38-314 (336)
340 3cvr_A Invasion plasmid antige 99.9 3E-22 1E-26 236.9 8.5 109 50-174 41-153 (571)
341 1h6u_A Internalin H; cell adhe 99.9 1.5E-21 5.2E-26 214.9 12.6 221 111-379 17-237 (308)
342 2ca6_A RAN GTPase-activating p 99.8 1E-23 3.5E-28 240.1 -8.3 256 79-353 23-320 (386)
343 2ca6_A RAN GTPase-activating p 99.8 1.2E-23 4E-28 239.7 -8.4 242 64-328 32-319 (386)
344 2o6s_A Variable lymphocyte rec 99.8 7.5E-21 2.6E-25 196.7 12.2 187 50-264 3-189 (208)
345 3goz_A Leucine-rich repeat-con 99.8 1.4E-22 4.6E-27 228.8 -1.1 255 93-374 3-299 (362)
346 2ast_B S-phase kinase-associat 99.8 6E-22 2.1E-26 220.9 2.0 251 89-380 48-314 (336)
347 4ay9_X Follicle-stimulating ho 99.8 2.8E-20 9.6E-25 208.7 15.0 200 116-325 12-215 (350)
348 3cvr_A Invasion plasmid antige 99.8 3.3E-20 1.1E-24 219.4 13.7 123 217-356 121-250 (571)
349 3ogk_B Coronatine-insensitive 99.8 4.8E-22 1.7E-26 239.5 -6.0 306 64-377 164-531 (592)
350 2o6s_A Variable lymphocyte rec 99.8 1.6E-19 5.6E-24 186.6 13.0 96 233-336 93-189 (208)
351 1dce_A Protein (RAB geranylger 99.8 2.7E-21 9.1E-26 230.0 -5.2 205 110-343 346-567 (567)
352 1h6t_A Internalin B; cell adhe 99.8 8.3E-19 2.8E-23 191.3 13.7 193 112-351 23-215 (291)
353 3ogk_B Coronatine-insensitive 99.8 5.3E-22 1.8E-26 239.1 -13.0 306 65-373 139-502 (592)
354 3e6j_A Variable lymphocyte rec 99.8 2E-18 6.7E-23 181.4 15.5 114 45-174 12-125 (229)
355 1m9s_A Internalin B; cell inva 99.8 3E-19 1E-23 213.6 9.2 191 88-326 21-211 (605)
356 2v9t_B SLIT homolog 2 protein 99.8 2.4E-18 8.3E-23 179.5 15.0 155 194-353 14-169 (220)
357 1m9s_A Internalin B; cell inva 99.8 7.1E-19 2.4E-23 210.3 11.9 198 111-355 19-216 (605)
358 1h6t_A Internalin B; cell adhe 99.8 5E-19 1.7E-23 193.0 8.8 197 137-379 24-220 (291)
359 4b8c_D Glucose-repressible alc 99.8 7.5E-20 2.6E-24 224.2 2.3 126 25-174 131-260 (727)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 2.9E-18 1E-22 178.9 13.4 155 195-354 15-171 (220)
361 1xeu_A Internalin C; cellular 99.7 4E-18 1.4E-22 183.0 12.7 172 111-352 17-188 (263)
362 1dce_A Protein (RAB geranylger 99.7 1.6E-20 5.3E-25 223.3 -7.1 193 134-356 346-553 (567)
363 2xot_A Amphoterin-induced prot 99.7 4.4E-18 1.5E-22 191.7 13.0 65 236-300 108-176 (361)
364 3e6j_A Variable lymphocyte rec 99.7 1.4E-17 4.6E-22 175.0 15.6 155 194-354 22-177 (229)
365 2xot_A Amphoterin-induced prot 99.7 5.3E-18 1.8E-22 190.9 13.3 107 68-178 22-129 (361)
366 2v9t_B SLIT homolog 2 protein 99.7 1E-17 3.5E-22 174.7 14.3 101 69-173 16-116 (220)
367 2p1m_B Transport inhibitor res 99.7 8.7E-22 3E-26 237.3 -19.5 327 64-393 105-516 (594)
368 1zth_A RIO1 serine protein kin 99.7 2.9E-18 9.9E-23 183.5 9.1 136 630-779 49-219 (258)
369 2v70_A SLIT-2, SLIT homolog 2 99.7 2.4E-17 8.4E-22 171.8 13.9 103 68-174 15-118 (220)
370 1xeu_A Internalin C; cellular 99.7 9E-18 3.1E-22 180.2 8.2 82 86-174 17-98 (263)
371 4ezg_A Putative uncharacterize 99.7 4.9E-17 1.7E-21 166.4 11.6 132 132-299 39-171 (197)
372 2p1m_B Transport inhibitor res 99.7 1.3E-19 4.3E-24 218.4 -9.3 301 64-373 130-520 (594)
373 4ezg_A Putative uncharacterize 99.7 7.5E-17 2.6E-21 165.1 11.5 155 108-300 39-194 (197)
374 4b8c_D Glucose-repressible alc 99.7 1.8E-17 6.3E-22 203.0 5.3 169 65-250 192-369 (727)
375 1w8a_A SLIT protein; signaling 99.7 3.1E-16 1.1E-20 159.7 13.4 138 241-379 30-169 (192)
376 1w8a_A SLIT protein; signaling 99.7 1.9E-16 6.4E-21 161.4 10.1 133 67-209 11-144 (192)
377 2o6r_A Variable lymphocyte rec 99.6 1.6E-15 5.3E-20 152.3 10.7 139 50-208 3-141 (177)
378 3sb4_A Hypothetical leucine ri 99.6 6.9E-16 2.4E-20 171.3 7.8 289 78-388 13-326 (329)
379 4gyi_A RIO2 kinase; protein ki 99.6 2.9E-15 9.9E-20 166.5 12.6 138 629-779 96-265 (397)
380 3sb4_A Hypothetical leucine ri 99.6 8E-16 2.7E-20 170.8 7.4 203 112-319 100-328 (329)
381 2ell_A Acidic leucine-rich nuc 99.6 2.1E-15 7.1E-20 150.0 8.5 133 216-350 24-161 (168)
382 2ell_A Acidic leucine-rich nuc 99.6 2.1E-15 7.3E-20 149.9 8.2 137 239-377 23-165 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 1E-14 3.5E-19 148.6 13.4 112 240-353 31-143 (193)
384 4fdw_A Leucine rich hypothetic 99.5 1.4E-13 4.8E-18 156.4 20.1 269 85-375 110-386 (401)
385 2wfh_A SLIT homolog 2 protein 99.5 3.3E-14 1.1E-18 144.8 13.4 127 194-326 13-140 (193)
386 2o6r_A Variable lymphocyte rec 99.5 4.7E-14 1.6E-18 141.4 13.9 114 240-354 28-142 (177)
387 4fdw_A Leucine rich hypothetic 99.5 1.9E-13 6.6E-18 155.3 20.2 261 111-390 111-377 (401)
388 2je0_A Acidic leucine-rich nuc 99.5 3.3E-15 1.1E-19 145.3 4.6 127 216-344 17-148 (149)
389 2je0_A Acidic leucine-rich nuc 99.5 8E-15 2.7E-19 142.6 6.6 129 238-368 15-149 (149)
390 1a9n_A U2A', U2A'; complex (nu 99.5 3.8E-14 1.3E-18 142.0 6.9 129 215-349 18-153 (176)
391 1ds9_A Outer arm dynein; leuci 99.5 2.1E-16 7.3E-21 161.8 -10.6 131 109-299 14-152 (198)
392 1ds9_A Outer arm dynein; leuci 99.5 1.2E-15 4.1E-20 156.2 -5.4 87 84-174 14-106 (198)
393 1a9n_A U2A', U2A'; complex (nu 99.4 7.1E-14 2.4E-18 140.1 7.2 136 235-374 14-155 (176)
394 3g39_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 134.2 10.7 105 67-175 12-116 (170)
395 3g39_A Variable lymphocyte rec 99.4 1.3E-12 4.4E-17 130.0 11.6 110 242-355 11-121 (170)
396 2r9u_A Variable lymphocyte rec 99.4 1.5E-12 5.3E-17 130.0 11.7 110 58-174 9-118 (174)
397 2r9u_A Variable lymphocyte rec 99.3 3E-12 1E-16 127.8 11.8 109 243-355 15-124 (174)
398 4fs7_A Uncharacterized protein 99.2 3E-10 1E-14 129.1 22.4 302 65-391 72-374 (394)
399 2ifg_A High affinity nerve gro 99.2 7.6E-12 2.6E-16 139.7 8.4 110 51-174 4-116 (347)
400 3tm0_A Aminoglycoside 3'-phosp 99.2 4.2E-11 1.4E-15 128.0 12.3 147 623-777 9-212 (263)
401 3un9_A NLR family member X1; l 99.1 4.6E-13 1.6E-17 150.6 -7.6 162 136-327 71-254 (372)
402 2ifg_A High affinity nerve gro 99.1 5.8E-11 2E-15 132.5 9.1 103 196-301 13-117 (347)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 1.4E-10 4.6E-15 123.6 10.4 129 637-778 29-214 (264)
404 4fs7_A Uncharacterized protein 99.1 2.1E-09 7.1E-14 122.1 19.5 292 75-391 58-351 (394)
405 3un9_A NLR family member X1; l 99.1 2.5E-12 8.5E-17 144.7 -6.3 135 216-350 101-253 (372)
406 4gt6_A Cell surface protein; l 99.0 1.1E-08 3.8E-13 116.1 19.9 103 66-171 66-170 (394)
407 3dxp_A Putative acyl-COA dehyd 98.9 3.3E-09 1.1E-13 118.8 12.5 142 632-778 42-248 (359)
408 4gt6_A Cell surface protein; l 98.9 1.9E-08 6.5E-13 114.1 18.9 295 76-391 51-365 (394)
409 3sg8_A APH(2'')-ID; antibiotic 98.8 2.8E-09 9.6E-14 116.4 7.2 186 633-831 25-287 (304)
410 2ra8_A Uncharacterized protein 98.8 3.1E-10 1.1E-14 126.5 -3.6 204 64-298 107-341 (362)
411 2ra8_A Uncharacterized protein 98.7 1.4E-09 4.8E-14 121.3 -1.1 40 311-350 278-321 (362)
412 4h09_A Hypothetical leucine ri 98.6 1.8E-06 6.3E-11 97.0 21.8 294 64-379 46-352 (379)
413 4h09_A Hypothetical leucine ri 98.6 2E-06 7E-11 96.7 20.0 287 83-391 41-341 (379)
414 3d1u_A Putative fructosamine-3 98.5 5.2E-07 1.8E-11 97.4 13.7 77 632-712 19-98 (288)
415 3rw6_A Nuclear RNA export fact 98.5 6.6E-10 2.3E-14 117.7 -10.2 145 55-208 79-237 (267)
416 3r70_A Aminoglycoside phosphot 98.5 9E-07 3.1E-11 97.2 13.1 137 629-779 38-238 (320)
417 3rw6_A Nuclear RNA export fact 98.3 6.8E-08 2.3E-12 102.2 -0.6 63 237-300 167-233 (267)
418 3tdw_A Gentamicin resistance p 98.2 6.2E-06 2.1E-10 89.8 13.4 136 633-778 24-224 (306)
419 1io0_A Tropomodulin; LRR prote 98.2 1.1E-07 3.7E-12 95.6 -1.6 119 232-350 28-165 (185)
420 3ats_A Putative uncharacterize 98.2 4.1E-06 1.4E-10 93.3 11.1 81 634-714 26-123 (357)
421 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.9E-06 2.4E-10 91.6 12.4 77 630-712 43-122 (362)
422 1io0_A Tropomodulin; LRR prote 98.1 3.5E-07 1.2E-11 91.8 0.5 112 214-325 34-164 (185)
423 4gkh_A Aminoglycoside 3'-phosp 98.1 5.9E-06 2E-10 88.1 9.9 136 634-778 30-223 (272)
424 2q83_A YTAA protein; 2635576, 97.9 7.8E-05 2.7E-09 82.1 13.3 139 634-777 38-251 (346)
425 3jr1_A Putative fructosamine-3 97.8 0.00016 5.4E-09 78.5 13.6 138 632-774 40-232 (312)
426 3f7w_A Putative fructosamine-3 97.8 9.7E-05 3.3E-09 79.5 11.8 78 630-711 17-97 (288)
427 2olc_A MTR kinase, methylthior 97.8 6E-05 2E-09 85.2 10.3 75 633-709 35-120 (397)
428 2ppq_A HSK, HK, homoserine kin 97.4 0.00053 1.8E-08 74.8 11.6 158 617-777 6-216 (322)
429 3e4g_A ATP synthase subunit S, 97.4 2.6E-05 8.8E-10 76.6 0.1 39 65-103 62-100 (176)
430 2pyw_A Uncharacterized protein 97.3 0.00046 1.6E-08 78.5 9.6 73 633-708 39-122 (420)
431 3e4g_A ATP synthase subunit S, 97.2 6.5E-05 2.2E-09 73.7 0.8 35 313-347 115-150 (176)
432 1zyl_A Hypothetical protein YI 97.2 0.0049 1.7E-07 67.2 15.4 158 617-778 10-223 (328)
433 1nw1_A Choline kinase (49.2 KD 97.0 0.0016 5.6E-08 74.0 9.5 74 633-712 78-160 (429)
434 3dxq_A Choline/ethanolamine ki 97.0 0.0027 9.2E-08 68.5 10.7 71 633-711 23-95 (301)
435 3csv_A Aminoglycoside phosphot 96.9 0.0011 3.9E-08 72.6 7.7 140 634-778 24-217 (333)
436 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00049 1.7E-08 68.8 3.3 91 259-349 65-170 (197)
437 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00015 5.3E-09 72.4 -0.9 111 215-325 40-170 (197)
438 3feg_A Choline/ethanolamine ki 96.7 0.0045 1.5E-07 68.9 10.0 139 634-777 56-253 (379)
439 2qg7_A Ethanolamine kinase PV0 96.6 0.01 3.5E-07 67.8 12.5 75 633-712 113-189 (458)
440 3c5i_A Choline kinase; choline 96.6 0.0043 1.5E-07 69.1 9.0 73 634-711 39-121 (369)
441 3i1a_A Spectinomycin phosphotr 96.5 0.0085 2.9E-07 65.8 10.5 66 639-711 34-108 (339)
442 3rfe_A Platelet glycoprotein I 96.0 0.011 3.8E-07 54.9 7.1 40 313-352 32-71 (130)
443 3rfe_A Platelet glycoprotein I 96.0 0.0062 2.1E-07 56.7 5.3 56 117-174 12-68 (130)
444 3f2s_A CK, chetk-alpha, cholin 95.4 0.051 1.7E-06 60.7 10.5 140 634-777 58-279 (401)
445 3mes_A Choline kinase; malaria 94.4 0.17 5.9E-06 56.9 11.5 75 633-712 75-158 (424)
446 2ks1_B Epidermal growth factor 94.1 0.028 9.4E-07 40.7 2.5 30 558-587 11-40 (44)
447 2l2t_A Receptor tyrosine-prote 93.9 0.023 7.9E-07 40.9 1.8 32 557-588 9-40 (44)
448 2yle_A Protein spire homolog 1 93.8 0.33 1.1E-05 48.7 10.5 98 710-826 34-131 (229)
449 2k1k_A Ephrin type-A receptor 90.8 0.12 4E-06 36.2 2.1 30 555-584 8-37 (38)
450 3g15_A CK, chetk-alpha, cholin 90.6 0.95 3.2E-05 50.5 10.7 29 750-778 246-280 (401)
451 2jwa_A Receptor tyrosine-prote 88.1 0.19 6.5E-06 36.2 1.5 17 571-587 23-39 (44)
452 2k9y_A Ephrin type-A receptor 79.5 0.54 1.8E-05 33.6 0.8 20 557-576 12-31 (41)
453 3cxl_A N-chimerin; SH2, RHO-GA 78.4 0.25 8.4E-06 56.4 -2.0 60 633-695 147-215 (463)
454 4ann_A ESSB; membrane protein, 68.3 12 0.0004 37.4 7.6 116 682-832 43-158 (215)
455 4ano_A ESSB; membrane protein, 64.5 17 0.00057 36.4 7.9 114 682-831 48-162 (219)
456 2l8s_A Integrin alpha-1; trans 64.2 3.8 0.00013 30.8 2.3 25 555-579 7-31 (54)
457 1iij_A ERBB-2 receptor protein 60.0 2.2 7.6E-05 29.0 0.4 24 561-585 10-33 (35)
458 2klu_A T-cell surface glycopro 58.2 4.1 0.00014 31.7 1.6 16 565-580 14-29 (70)
459 2knc_A Integrin alpha-IIB; tra 48.4 12 0.00042 28.2 2.8 24 555-578 10-33 (54)
460 2k1a_A Integrin alpha-IIB; sin 41.4 14 0.00048 26.3 2.1 24 555-578 8-31 (42)
461 2lx0_A Membrane fusion protein 39.0 31 0.0011 21.6 3.0 20 564-583 8-27 (32)
462 2lz0_A Uncharacterized protein 36.6 52 0.0018 28.2 5.5 46 75-122 7-52 (100)
463 2ks1_B Epidermal growth factor 33.7 24 0.00082 25.4 2.3 32 556-587 12-43 (44)
464 2l6w_A Beta-type platelet-deri 39.1 9.2 0.00031 26.4 0.0 20 568-587 18-37 (39)
465 2l2t_A Receptor tyrosine-prote 30.3 19 0.00067 25.9 1.3 12 573-584 28-39 (44)
466 2jwa_A Receptor tyrosine-prote 29.8 45 0.0015 24.0 3.1 21 568-588 23-43 (44)
467 2lz0_A Uncharacterized protein 29.3 59 0.002 27.9 4.6 46 228-274 8-53 (100)
468 2klu_A T-cell surface glycopro 28.7 49 0.0017 25.8 3.3 32 560-591 12-44 (70)
469 2knc_B Integrin beta-3; transm 28.7 27 0.00093 28.7 2.2 17 558-574 11-27 (79)
470 1cja_A Protein (actin-fragmin 27.3 1.5E+02 0.0052 31.4 8.2 79 698-778 156-237 (342)
471 3ls8_A Phosphatidylinositol 3- 26.9 2.4E+02 0.0084 32.6 10.5 83 687-777 402-501 (614)
472 3hhm_A Phosphatidylinositol-4, 22.3 2.3E+02 0.0078 35.2 9.5 48 723-777 911-961 (1091)
473 2l34_A TYRO protein tyrosine k 21.0 75 0.0026 21.3 2.8 23 560-583 9-31 (33)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-53 Score=464.55 Aligned_cols=260 Identities=25% Similarity=0.452 Sum_probs=217.3
Q ss_pred cCCCccCeeeccCceEEEEEEeC------CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP------NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45677889999999999999864 478899999987766667889999999999999999999999999999999
Q ss_pred EEEecCCCCcccccCCCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEE
Q 002189 702 IYEFVPNGSLGDSLSGKN-----------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKV 770 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 770 (955)
|||||++|+|.++|+..+ ...++|.+++.++.|||+||+|||+.+ ||||||||+||||++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999996532 357999999999999999999999988 999999999999999999999
Q ss_pred eecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhh
Q 002189 771 ADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 771 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
+|||+|+.....+.........||++|||||++.++.++.++|||||||++|||+| |+.||..... .+.+..+.....
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-~~~~~~i~~~~~ 248 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-NEVIECITQGRV 248 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHHTCC
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCC
Confidence 99999997755444333344679999999999999999999999999999999999 8999975432 232222222110
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
+. .+..++.++.+|+.+||+.||++||||+||++.|+++.+.
T Consensus 249 ----------~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 249 ----------LQ----RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ----------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CC----CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11 1223447889999999999999999999999999998755
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.3e-53 Score=467.70 Aligned_cols=260 Identities=24% Similarity=0.449 Sum_probs=209.9
Q ss_pred cCCCccCeeeccCceEEEEEEeC------CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP------NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
++|...++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34666789999999999999864 478999999987766667889999999999999999999999999999999
Q ss_pred EEEecCCCCcccccCCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCce
Q 002189 702 IYEFVPNGSLGDSLSGKN-------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNA 768 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 768 (955)
|||||++|+|.++++... ..+++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 999999999999987542 236999999999999999999999988 9999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhh
Q 002189 769 KVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDK 847 (955)
Q Consensus 769 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~ 847 (955)
||+|||+|+.....+.........||++|||||++.+..++.++|||||||++|||+| |+.||..... .+.+..+...
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-~~~~~~i~~g 276 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-TEAIDCITQG 276 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-HHHHHHHHHT
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcC
Confidence 9999999997765544444456789999999999999999999999999999999999 8999975443 2222222221
Q ss_pred hhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 848 KKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 848 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
. .+. .+..++.++.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus 277 ~----------~~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 R----------ELE----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp C----------CCC----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred C----------CCC----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1 111 1223447889999999999999999999999999998754
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.4e-53 Score=462.63 Aligned_cols=256 Identities=23% Similarity=0.401 Sum_probs=211.5
Q ss_pred CCCccCeeeccCceEEEEEEeC------CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 629 NFSDANDVGSGGYGKVYKGTLP------NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 629 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
+++..++||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3456788999999999999863 468999999976433 335789999999999999999999999999999999
Q ss_pred EEEecCCCCcccccCCCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc
Q 002189 702 IYEFVPNGSLGDSLSGKN--------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN 767 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~ 767 (955)
|||||++|+|.++|+... ...++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 999999999999986432 235899999999999999999999988 999999999999999999
Q ss_pred eEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHh
Q 002189 768 AKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMD 846 (955)
Q Consensus 768 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~ 846 (955)
+||+|||+|+.....+.....+...||++|||||++.++.++.++|||||||++|||+| |+.||..... .+.+..+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-~~~~~~i~- 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVVEMIR- 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-HHHHHHHH-
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-
Confidence 99999999987755444344455679999999999999999999999999999999999 8999965432 23222222
Q ss_pred hhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q 002189 847 KKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENI 902 (955)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 902 (955)
... . ...+..++..+.+|+.+||+.||++||||+||++.|+.+
T Consensus 262 ~~~--------~-----~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 262 NRQ--------V-----LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TTC--------C-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred cCC--------C-----CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111 0 111223457889999999999999999999999998753
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=9.1e-52 Score=451.54 Aligned_cols=259 Identities=27% Similarity=0.464 Sum_probs=205.3
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
++|...++||+|+||+||+|++.+ .||||+++.... ...++|.+|+++|++++|||||+++|+|. ++..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEc
Confidence 456778899999999999999753 699999875433 33467999999999999999999999885 4578999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
|++|+|.++++..+ ..++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++.+||+|||+|+........
T Consensus 113 ~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999997543 36999999999999999999999988 999999999999999999999999999876544433
Q ss_pred ceeeeeecCCCCCCHHHhhh---CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 786 HITTQVKGTMGYLDPEYYMT---QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~---~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||........ +...+... ...|.+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~--------~~~p~~ 259 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRG--------YASPDL 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTT--------CCCCCS
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcC--------CCCCCc
Confidence 34456789999999999974 4589999999999999999999999975443322 22222211 112222
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
. .....++..+.+|+.+||+.||++||||+||++.|+.+.
T Consensus 260 ~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 260 S-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp T-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred c-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1 122334578899999999999999999999999998774
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.8e-51 Score=455.61 Aligned_cols=269 Identities=26% Similarity=0.402 Sum_probs=220.1
Q ss_pred HHHHHHhcCCCccCeeeccCceEEEEEEeCC------CcEEEEEEcccCCcc-hhHHHHHHHHHHHhccC-CCcceEEEE
Q 002189 621 EEVKKYTNNFSDANDVGSGGYGKVYKGTLPN------GQLIAIKRAQQGSMQ-GGQEFKMEIELLSRVHH-KNLVSLLGF 692 (955)
Q Consensus 621 ~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H-~niv~l~~~ 692 (955)
.+.+...++|...+.||+|+||+||+|++.. ++.||||+++..... ..++|.+|+++|.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 3444456788999999999999999998642 468999999865443 34679999999999965 999999999
Q ss_pred EEeC-CeEEEEEEecCCCCcccccCCCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCC
Q 002189 693 CFDR-GEQMLIYEFVPNGSLGDSLSGKN--------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKS 757 (955)
Q Consensus 693 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~ 757 (955)
|.+. +..+||||||++|+|.++|+... ...++|.+++.++.|||+||+|||+.+ ||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCc
Confidence 9775 56899999999999999996432 235899999999999999999999988 99999999
Q ss_pred ccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCch
Q 002189 758 SNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKY 836 (955)
Q Consensus 758 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~ 836 (955)
+|||+++++.+||+|||+|+.+.............||++|||||++.++.|+.++|||||||++|||+| |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999998765544444556789999999999999999999999999999999998 8999975443
Q ss_pred HHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 837 IVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
... +...+.... .+.. +..+..++.+++.+||+.||++|||++||+++|+.+++..
T Consensus 294 ~~~-~~~~i~~g~---------~~~~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 294 DEE-FCRRLKEGT---------RMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp SHH-HHHHHHHTC---------CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHH-HHHHHHcCC---------CCCC----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 222 222222211 1111 1223467899999999999999999999999999998753
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.4e-50 Score=448.33 Aligned_cols=251 Identities=22% Similarity=0.411 Sum_probs=206.5
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
++|...+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5789999999999999999986 4799999999976433 234679999999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
||++|+|.+++...+...+++.+...++.||+.||+|||+.+ ||||||||+||||++++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 999999999997666667899999999999999999999998 9999999999999999999999999998764321
Q ss_pred cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCC
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGL 864 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (955)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||... +..+.+..+.... . |..
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~---------~-~~~-- 245 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-SMKNLVLKIISGS---------F-PPV-- 245 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHTC---------C-CCC--
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCC---------C-CCC--
Confidence 2234467999999999999999999999999999999999999999654 3333333333221 1 111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 865 STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 865 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
......++.+|+.+||+.||++|||++|++++
T Consensus 246 --~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 246 --SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11233678899999999999999999999875
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.2e-50 Score=444.73 Aligned_cols=250 Identities=23% Similarity=0.388 Sum_probs=211.7
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
+.|+..++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45788899999999999999964 79999999997655555677899999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDH 786 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~ 786 (955)
++|+|.+++... .+++..+..++.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+|+.+.... .
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 225 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 225 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--C
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC--C
Confidence 999999988753 5899999999999999999999999 9999999999999999999999999999775432 2
Q ss_pred eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCC
Q 002189 787 ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLST 866 (955)
Q Consensus 787 ~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 866 (955)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.... ..+.+..+... ..+.+. .
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~----------~~~~~~--~ 292 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDN----------LPPRLK--N 292 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHS----------SCCCCS--C
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHcC----------CCCCCC--c
Confidence 2345789999999999999999999999999999999999999996543 23333322211 122211 1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 867 TLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 867 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
......++.+|+.+||+.||++|||++|++++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 22334678999999999999999999999875
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.6e-50 Score=439.67 Aligned_cols=257 Identities=21% Similarity=0.261 Sum_probs=209.2
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
+.|...++||+|+||+||+|+.. +|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45677789999999999999964 689999999976432 246999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC-ceEEeecccccccCCCCCc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL-NAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DFGla~~~~~~~~~ 785 (955)
++|+|.++++..+ .+++.....++.||+.||+|||+.+ ||||||||+||||+.++ .+||+|||+|+.+......
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999997654 6999999999999999999999998 99999999999999987 6999999999977543221
Q ss_pred c---eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 786 H---ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 786 ~---~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .....+||+.|||||++.+..|+.++|||||||++|||+||++||...... .....+...... ..
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-~~~~~i~~~~~~---~~------- 276 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASEPPP---IR------- 276 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-CCHHHHHHSCCG---GG-------
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHcCCCC---ch-------
Confidence 1 123457999999999999999999999999999999999999999643221 111222221110 00
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
..+......+.+++.+||+.||++|||++|++++|..+++..+
T Consensus 277 --~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 277 --EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp --GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred --hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 0112234678899999999999999999999999999987754
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.6e-50 Score=438.73 Aligned_cols=267 Identities=24% Similarity=0.353 Sum_probs=203.9
Q ss_pred CCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCC----eEEEEEE
Q 002189 629 NFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG----EQMLIYE 704 (955)
Q Consensus 629 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV~e 704 (955)
+|...++||+|+||+||+|++ +|+.||||+++.... ....++.|+..+.+++|||||+++|+|.+++ ..|||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466778999999999999998 589999999975321 1223345666667889999999999998764 5799999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcc-----CCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELA-----NPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
||++|+|.++++.. .++|..+.+++.|+|+||+|||+.+ .++||||||||+||||++++++||+|||+|+..
T Consensus 82 y~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999754 5899999999999999999999862 345999999999999999999999999999877
Q ss_pred CCCCCc--ceeeeeecCCCCCCHHHhhhC------CCCChhhhHHHHHHHHHHHhCCCCCcCCc-------------hHH
Q 002189 780 SDSEKD--HITTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVLMLELLTGRRPIERGK-------------YIV 838 (955)
Q Consensus 780 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~ksDvwS~Gv~l~elltg~~P~~~~~-------------~~~ 838 (955)
...... .......||++|||||++.+. .++.++|||||||++|||+||.+|+.... ...
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543321 122346799999999999764 36789999999999999999987764211 111
Q ss_pred HHHHHHHhhhhhhhhhhhccCCcCCCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCC
Q 002189 839 REIRTVMDKKKELYNLYELIDPTIGLS-TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGL 908 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 908 (955)
..+.... ..+..+|.++.. ...+.+..+.+|+.+||+.||++||||+||++.|+++.++.++
T Consensus 239 ~~~~~~~--------~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~i 301 (303)
T 3hmm_A 239 EEMRKVV--------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp HHHHHHH--------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHH--------hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCC
Confidence 1121111 112234443322 2335667899999999999999999999999999999876553
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-49 Score=430.49 Aligned_cols=247 Identities=26% Similarity=0.408 Sum_probs=199.8
Q ss_pred CccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEe----CCeEEEEE
Q 002189 631 SDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFD----RGEQMLIY 703 (955)
Q Consensus 631 ~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~ 703 (955)
...++||+|+||+||+|+.. +++.||||++.... ....+.|.+|+++|++++|||||+++++|.+ ++..||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 34567999999999999864 68999999987543 2334679999999999999999999999875 34579999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC-CCceEEeecccccccCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE-RLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DFGla~~~~~~ 782 (955)
|||++|+|.++++..+ .+++..+..++.||++||+|||+++ ++||||||||+||||+. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 9999999999997643 6899999999999999999999875 46999999999999984 79999999999986432
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||............+..... .+..
T Consensus 185 ---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~---------~~~~ 251 (290)
T 3fpq_A 185 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK---------PASF 251 (290)
T ss_dssp ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC---------CGGG
T ss_pred ---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC---------CCCC
Confidence 22345689999999998864 6999999999999999999999999765554433332222111 0111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+.....++.+|+.+||+.||++|||++|++++
T Consensus 252 ----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 252 ----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11123568899999999999999999999864
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-49 Score=433.75 Aligned_cols=250 Identities=24% Similarity=0.311 Sum_probs=211.6
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688999999999999999986 479999999987532 223467899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.++++..+ .+++.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997654 6899999999999999999999999 9999999999999999999999999999876554
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..+....+.... ...
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~~-----------~~~- 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-EGLIFAKIIKLE-----------YDF- 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTC-----------CCC-
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCC-----------CCC-
Confidence 4444556789999999999999999999999999999999999999996543 333333333211 111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+.....++.+|+.+||+.||++|||++|++.+
T Consensus 254 ---p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 254 ---PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ---CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ---CcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 11223678899999999999999999987654
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.6e-49 Score=446.08 Aligned_cols=250 Identities=23% Similarity=0.388 Sum_probs=212.2
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
+.|...++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46888999999999999999964 69999999998766666677999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDH 786 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~ 786 (955)
++|+|.++++.. .+++.++..++.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+|+.+.... .
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 302 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 302 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--C
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC--c
Confidence 999999988643 5899999999999999999999999 9999999999999999999999999998775432 2
Q ss_pred eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCC
Q 002189 787 ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLST 866 (955)
Q Consensus 787 ~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 866 (955)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+.+..+... ..+.+. .
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~~~----------~~~~~~--~ 369 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-LKAMKMIRDN----------LPPRLK--N 369 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHS----------CCCCCS--C
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHcC----------CCCCCc--c
Confidence 23457899999999999999999999999999999999999999965432 2333222211 122221 1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 867 TLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 867 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
......++.+|+.+||+.||++|||++|++++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12234678899999999999999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.7e-48 Score=415.43 Aligned_cols=246 Identities=24% Similarity=0.377 Sum_probs=193.1
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|+..+.||+|+||+||+|+. .+|+.||||++++... ...+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999986 4799999999975432 22457899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+ +|+|.+++...+ .+++.....++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 689999887554 6999999999999999999999998 9999999999999999999999999998765432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||... +.......+.... +.+
T Consensus 167 ---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-~~~~~~~~i~~~~-----------~~~ 231 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-SIPVLFKNISNGV-----------YTL 231 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTC-----------CCC
T ss_pred ---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCC-----------CCC
Confidence 2345689999999999998876 57999999999999999999999653 3333333222211 111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. .....++.+++.+||+.||++|||++|++++
T Consensus 232 p----~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 232 P----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred C----CCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1 1123678899999999999999999999985
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.7e-48 Score=424.68 Aligned_cols=247 Identities=30% Similarity=0.362 Sum_probs=198.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC----CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP----NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
++|+..+.||+|+||+||+|+.. .++.||||+++.... .....+.+|+++|++++|||||++++++.+++..||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46889999999999999999852 478999999875422 233568899999999999999999999999999999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
|||||++|+|.+++...+ .+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997654 6899999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||... +..+....+.... +.
T Consensus 179 ~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~-----------~~ 244 (304)
T 3ubd_A 179 HE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-DRKETMTMILKAK-----------LG 244 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCC-----------CC
T ss_pred CC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-CHHHHHHHHHcCC-----------CC
Confidence 32 2233468999999999999999999999999999999999999999654 3333333332211 11
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTM-----SEVVK 897 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 897 (955)
. +.....++.+|+.+||+.||++|||+ +|+++
T Consensus 245 ~----p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 M----PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred C----CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1 11233678899999999999999984 56664
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3e-47 Score=416.48 Aligned_cols=252 Identities=24% Similarity=0.394 Sum_probs=190.5
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc-hhHHHHHHHHHHHhccCCCcceEEEEEEeCCe------
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE------ 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 698 (955)
.++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++|++++|||||++++++.+.+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 456889999999999999999864 7899999999754433 34678999999999999999999999976543
Q ss_pred ------EEEEEEecCCCCcccccCCCCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEe
Q 002189 699 ------QMLIYEFVPNGSLGDSLSGKNG-IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVA 771 (955)
Q Consensus 699 ------~~lV~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 771 (955)
.|+|||||++|+|.+++..... ...++..++.++.|+++||+|||+.+ ||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEc
Confidence 6899999999999999976542 23567778899999999999999998 9999999999999999999999
Q ss_pred ecccccccCCCCCcc----------eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHH
Q 002189 772 DFGLSKSMSDSEKDH----------ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREI 841 (955)
Q Consensus 772 DFGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~ 841 (955)
|||+|+.+....... ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||.........+
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~ 237 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTL 237 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHH
Confidence 999998775432211 1234579999999999999999999999999999999996 775432221111
Q ss_pred HHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 842 RTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 842 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..+.. .-.|. ........+.+++.+||+.||.+|||+.|++++
T Consensus 238 ~~~~~----------~~~p~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 238 TDVRN----------LKFPP----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHT----------TCCCH----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHhc----------CCCCC----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11110 00010 011222456789999999999999999999864
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1e-44 Score=407.20 Aligned_cols=265 Identities=23% Similarity=0.344 Sum_probs=205.7
Q ss_pred HHHhcCCCccCeeeccCceEEEEEEeC----CCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCe
Q 002189 624 KKYTNNFSDANDVGSGGYGKVYKGTLP----NGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGE 698 (955)
Q Consensus 624 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 698 (955)
....+.|...++||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|+.+ +|||||++++++.+++.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345678999999999999999999753 46899999987543 345688999999998 69999999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC-CceEEeeccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER-LNAKVADFGLSK 777 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DFGla~ 777 (955)
.|+||||+++|+|.+++. .+++.+...++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|||+|+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 999999999999999884 4889999999999999999999999 9999999999999877 799999999998
Q ss_pred ccCCCCCc--------------------------ceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCC
Q 002189 778 SMSDSEKD--------------------------HITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRP 830 (955)
Q Consensus 778 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P 830 (955)
...+.... ......+||+.|||||++.+. .++.++||||+||++|||+||+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 65432210 112335799999999999875 589999999999999999999999
Q ss_pred CcCCchHHHHHHHHHhhhhh--h----------------------hhhhhc---c---CCcC---------CCCCCHHHH
Q 002189 831 IERGKYIVREIRTVMDKKKE--L----------------------YNLYEL---I---DPTI---------GLSTTLKGF 871 (955)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~--~----------------------~~~~~~---~---d~~l---------~~~~~~~~~ 871 (955)
|..+.+..+.+..+..-... . ....+. . .|.. .........
T Consensus 247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence 98777665555443321100 0 000000 0 0000 000111223
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 872 EKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 872 ~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.++.+|+.+||+.||.+|||++|++++
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 578899999999999999999999864
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=408.18 Aligned_cols=264 Identities=20% Similarity=0.318 Sum_probs=204.1
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEe------CCe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFD------RGE 698 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 698 (955)
++|...+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688899999999999999986 4799999999975433 234678899999999999999999998764 357
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.|||||||+ |+|.+++...+ .+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 78999987654 7999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCC--cceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh----
Q 002189 779 MSDSEK--DHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL---- 851 (955)
Q Consensus 779 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---- 851 (955)
+..... .......+||+.|||||++.+. .++.++||||+||++|||++|++||.+. +..+.+..+.......
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~-~~~~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK-NYVHQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS-SHHHHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC-CHHHHHHHHHHhcCCCChHH
Confidence 643221 1223457899999999998875 5699999999999999999999999644 3334444433221100
Q ss_pred ---------hhhhhccCCcCCCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 852 ---------YNLYELIDPTIGLST---TLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 852 ---------~~~~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
......+.+...... ......++.+|+.+||+.||.+|||++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000011111110000 00123578899999999999999999999875
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.9e-44 Score=396.53 Aligned_cols=281 Identities=43% Similarity=0.742 Sum_probs=236.7
Q ss_pred cCHHHHHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCC
Q 002189 618 FSFEEVKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG 697 (955)
Q Consensus 618 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 697 (955)
+++.++...+++|...+.||+|+||+||+|++.+|+.||||++........+.+.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34444556678999999999999999999998889999999988776666788999999999999999999999999999
Q ss_pred eEEEEEEecCCCCcccccCCCC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccc
Q 002189 698 EQMLIYEFVPNGSLGDSLSGKN--GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGL 775 (955)
Q Consensus 698 ~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGl 775 (955)
..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997654 235899999999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCc-----hHHHHHHHHHhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGK-----YIVREIRTVMDKKKE 850 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~-----~~~~~~~~~~~~~~~ 850 (955)
++...............||+.|+|||++.+..++.++||||||+++|||+||+.||.... ....+......
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~---- 261 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN---- 261 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT----
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc----
Confidence 987654333333445679999999999999999999999999999999999999986422 12222222111
Q ss_pred hhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 851 LYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
...+...+++.............+.+++.+||+.||++||+++|++++|+.+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 1224455666666666778889999999999999999999999999999999754
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.2e-43 Score=393.31 Aligned_cols=284 Identities=42% Similarity=0.746 Sum_probs=236.2
Q ss_pred CCCcccCHHHHHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc-hhHHHHHHHHHHHhccCCCcceEEE
Q 002189 613 KGARCFSFEEVKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRVHHKNLVSLLG 691 (955)
Q Consensus 613 ~~~~~~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~ 691 (955)
.....+++.++....++|...+.||+|+||+||+|+..+|+.||||+++..... ....+.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 345789999999999999999999999999999999888999999999764332 2347899999999999999999999
Q ss_pred EEEeCCeEEEEEEecCCCCcccccCCCC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceE
Q 002189 692 FCFDRGEQMLIYEFVPNGSLGDSLSGKN--GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAK 769 (955)
Q Consensus 692 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 769 (955)
++.+.+..++||||+++|+|.++++... ...+++..+..++.|++.||+|||+...+.|+||||||+||++++++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999987653 34599999999999999999999998222399999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcC-------CchHHHHHH
Q 002189 770 VADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIER-------GKYIVREIR 842 (955)
Q Consensus 770 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~-------~~~~~~~~~ 842 (955)
|+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.. .....+++.
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 999999987654332 334445699999999999999999999999999999999999999952 112222222
Q ss_pred HHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q 002189 843 TVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIEN 901 (955)
Q Consensus 843 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 901 (955)
.... ........++.............+.+++.+||+.||.+|||++||+++|++
T Consensus 254 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLK----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTS----SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhh----chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 2111 122344556666666778888999999999999999999999999999885
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.5e-43 Score=418.43 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=211.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|+.++|||||++++++.+++..||||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 367899999999999999999864 7999999999876666667899999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC--CceEEeecccccccCCCC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER--LNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~--~~~kl~DFGla~~~~~~~ 783 (955)
|++|+|.+++.... ..+++.....++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 236 MSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp CCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred cCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 99999999886442 36899999999999999999999999 9999999999999854 899999999999875432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
.....+||+.|||||++.+..|+.++||||+||++|||++|..||..... .+.+..+..... .+++.
T Consensus 312 ---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-~~~~~~i~~~~~-------~~~~~-- 378 (573)
T 3uto_A 312 ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-DETLRNVKSCDW-------NMDDS-- 378 (573)
T ss_dssp ---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTTCC-------CCCSG--
T ss_pred ---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHhCCC-------CCCcc--
Confidence 33456899999999999999999999999999999999999999965433 233332222111 01111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......++.+|+.+||+.||.+|||++|++++
T Consensus 379 --~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 --AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111223678899999999999999999999874
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.4e-43 Score=411.20 Aligned_cols=247 Identities=24% Similarity=0.323 Sum_probs=200.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHH---HHHHHHHhccCCCcceEEEEEEeCCeEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFK---MEIELLSRVHHKNLVSLLGFCFDRGEQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~~ 700 (955)
++|...++||+|+||+||+|+.. +|+.||||++++... .....+. .++++++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57889999999999999999864 699999999864321 1122233 3466777789999999999999999999
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
||||||++|+|.++|...+ .+++.....++.||+.||+|||+.+ ||||||||+||||+.+|.+||+|||+|+.+.
T Consensus 269 lVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999997654 6899999999999999999999999 9999999999999999999999999998775
Q ss_pred CCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCc--hHHHHHHHHHhhhhhhhhhhhc
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGK--YIVREIRTVMDKKKELYNLYEL 857 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 857 (955)
... ....+||+.|||||++.. ..|+.++||||+||++|||++|++||.... +.......+...
T Consensus 344 ~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~---------- 409 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---------- 409 (689)
T ss_dssp SCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC----------
T ss_pred CCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC----------
Confidence 432 234689999999999975 579999999999999999999999996432 221111111111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q 002189 858 IDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPT-----MSEVVKD 898 (955)
Q Consensus 858 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 898 (955)
++.. +.....++.+|+.+||+.||.+|++ ++||+++
T Consensus 410 -~~~~----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 410 -AVEL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -CCCC----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -CCCC----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1111 1122367889999999999999998 7888875
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.5e-43 Score=424.49 Aligned_cols=360 Identities=20% Similarity=0.295 Sum_probs=288.8
Q ss_pred CHHHHHHHHHHHhhcCCCC----------CCCCCCCCCCCCCC---ccEEeCC-CCEeEEEecCCcCccccCcCcCCCCc
Q 002189 24 NDNDFVILKALKDDIWENE----------PPNWKNNDPCGDNW---EGIGCTN-SRVTSITLSGMGLKGQLSGDITGLTE 89 (955)
Q Consensus 24 ~~~~~~~L~~~k~~~~~~~----------~~~w~~~~~C~~~w---~gv~C~~-~~v~~L~L~~~~l~~~~~~~l~~l~~ 89 (955)
...|+.||++|++++.... ..+|..+.+|| .| .||+|+. ++|+.|+|++++++|.+|+.|+.|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCcc
Confidence 3579999999998873211 13798665553 79 9999975 69999999999999999999999999
Q ss_pred ccEEecCCCCC---------------------------------------------------------------------
Q 002189 90 LHTLDLSNNKD--------------------------------------------------------------------- 100 (955)
Q Consensus 90 L~~L~Ls~N~~--------------------------------------------------------------------- 100 (955)
|++|+|++|..
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 99999999841
Q ss_pred --------CccCCCCCcccccccccccccccccCCC-----------------CCCccc--cCCCCcEEEccCCCCcCcC
Q 002189 101 --------LRGPLPTTIGNLKKLSNLMLVGCSFSGP-----------------IPDSIG--SLQELVLLSLNSNGFSGRV 153 (955)
Q Consensus 101 --------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l~~~~ 153 (955)
+++ +|..|+++++|++|+|++|++++. +|..++ ++++|++|+|++|++.+.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 334 788899999999999999999985 999999 9999999999999999999
Q ss_pred CCCCCCCCCcCeeecCCce-eee-ccCCCCCCCCchhhhhccccccccCCcccccCCc-cccCCccceeeeeccCCCccc
Q 002189 154 PPSIGNLSNLYWLDLTDNK-LEG-EIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPE-KLFRPDMVLIHVLFDSNNLTG 230 (955)
Q Consensus 154 p~~~~~L~~L~~L~L~~N~-l~g-~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~-~~~~~~~~L~~L~L~~N~l~~ 230 (955)
|..|+++++|++|+|++|+ ++| .+|..++.+..+..+++|++|++++|+++ .+|. ..+..+++|+.|++++|+++|
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g 344 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEG 344 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCcc
Confidence 9999999999999999998 998 88877665544455688888899999988 8887 355567788888999998888
Q ss_pred cCCcccCCCCCCcEEEcccCCCCCCccccccCCCC-CCEEEccCCcCcccCCCCCCCC--CCCEEECcCCCCCCCCCChh
Q 002189 231 ELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTS-VNDLYLSNNKLTGAMPNLTGLS--VLSYLDMSNNSFDASEVPSW 307 (955)
Q Consensus 231 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~p~~ 307 (955)
.+| .|+.+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|.++.++..+..++ +|++|+|++|.+++ ..|..
T Consensus 345 ~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~ 421 (636)
T 4eco_A 345 KLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGS-VDGKN 421 (636)
T ss_dssp ECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTT-TTTCS
T ss_pred chh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCC-cchhh
Confidence 888 8888888888888888888 78888888888 8888888888886665555543 78888888888876 56666
Q ss_pred hc-------CCCCCCEEECcCCcceecCCcC-CCCCCCCcEEEeecCcceeeeCCCcchh--------hhhhhcccCCcc
Q 002189 308 FS-------SMQSLTTLMMENTNLKGQIPAD-LFSIPHLQTVVMKTNELNGTLDLGTSYS--------ENLLVNLQNNRI 371 (955)
Q Consensus 308 ~~-------~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~--------~l~~L~L~~N~l 371 (955)
|. .+++|+.|+|++|+++ .+|.. +..+++|+.|+|++|+++..++..+... +|+.|+|++|+|
T Consensus 422 l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 422 FDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp SCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred hcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcC
Confidence 66 6778888888888888 45544 4457888888888888885555444433 677888888888
Q ss_pred ccccCCCC-CCCcceeEecC
Q 002189 372 SAYTERGG-APAVNLTLIDN 390 (955)
Q Consensus 372 ~~~~~~~~-~~~~~L~~l~n 390 (955)
+.++...+ ..+.+|+.++.
T Consensus 501 ~~lp~~~~~~~l~~L~~L~L 520 (636)
T 4eco_A 501 TKLSDDFRATTLPYLVGIDL 520 (636)
T ss_dssp CBCCGGGSTTTCTTCCEEEC
T ss_pred CccChhhhhccCCCcCEEEC
Confidence 87766544 35555555544
No 23
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.1e-42 Score=425.82 Aligned_cols=393 Identities=20% Similarity=0.274 Sum_probs=270.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCCCCC------CCCCCCC------------ccEEeCC-CCEeEEEecCCcCccccCcC
Q 002189 23 TNDNDFVILKALKDDIWENEPPNWKNN------DPCGDNW------------EGIGCTN-SRVTSITLSGMGLKGQLSGD 83 (955)
Q Consensus 23 ~~~~~~~~L~~~k~~~~~~~~~~w~~~------~~C~~~w------------~gv~C~~-~~v~~L~L~~~~l~~~~~~~ 83 (955)
+...|+.||++||+++.+ + +|+.+ ++|+|.| .||+|+. ++|+.|+|++++++|.+|+.
T Consensus 266 ~~~~d~~ALl~~k~~l~~-~--~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDG-K--NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp HHHHHHHHHHHHHHHTTG-G--GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECGG
T ss_pred cchHHHHHHHHHHHHcCC-C--CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCchH
Confidence 346799999999999843 2 78644 4555689 9999984 89999999999999999999
Q ss_pred cCCCCcccEEec-CCCCCCccC----------------------------------------------------------
Q 002189 84 ITGLTELHTLDL-SNNKDLRGP---------------------------------------------------------- 104 (955)
Q Consensus 84 l~~l~~L~~L~L-s~N~~l~~~---------------------------------------------------------- 104 (955)
|++|++|+.|+| ++|. +.|.
T Consensus 343 l~~L~~L~~LdLss~N~-lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSE-TVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGCTTCCEEESCCTTH-HHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HhccccceEeeeccccc-ccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 999999999999 7763 4333
Q ss_pred ------------------CCCCcccccccccccccccccCC-----------------CCCCccc--cCCCCcEEEccCC
Q 002189 105 ------------------LPTTIGNLKKLSNLMLVGCSFSG-----------------PIPDSIG--SLQELVLLSLNSN 147 (955)
Q Consensus 105 ------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~Ls~N 147 (955)
+|..|+++++|++|+|++|+|++ .+|..++ ++++|++|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 78899999999999999999998 3899988 9999999999999
Q ss_pred CCcCcCCCCCCCCCCcCeeecCCce-eee-ccCCCCCCCC-chhhhhccccccccCCcccccCCc-cccCCccceeeeec
Q 002189 148 GFSGRVPPSIGNLSNLYWLDLTDNK-LEG-EIPVSDGNSP-GLDMLVRAKHFHFGKNQLSGSIPE-KLFRPDMVLIHVLF 223 (955)
Q Consensus 148 ~l~~~~p~~~~~L~~L~~L~L~~N~-l~g-~ip~~~~~~~-~l~~L~~L~~L~L~~N~l~g~ip~-~~~~~~~~L~~L~L 223 (955)
++.+.+|..|+++++|+.|+|++|+ ++| .+|..++.+. .+..+++|++|+|++|+++ .+|. ..+..+.+|+.|+|
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEEC
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEEC
Confidence 9999999999999999999999998 998 7887665544 4445557777777777777 7776 34455667777777
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCC-CCEEEccCCcCcccCCCCCCCC--CCCEEECcCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTS-VNDLYLSNNKLTGAMPNLTGLS--VLSYLDMSNNSFD 300 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~l~--~L~~L~Ls~N~l~ 300 (955)
++|+++ .+| .|+.+++|+.|+|++|.++ .+|..+.++++ |+.|+|++|.|+.++..+..++ +|+.|+|++|+++
T Consensus 581 s~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~ 657 (876)
T 4ecn_A 581 VHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIG 657 (876)
T ss_dssp TTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred CCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCC
Confidence 777777 666 6777777777777777777 66777777776 7777777777765444333332 2455555555444
Q ss_pred CC---------------------------CCChh-hcCCCCCCEEECcCCcceecCCcCCCCC--------CCCcEEEee
Q 002189 301 AS---------------------------EVPSW-FSSMQSLTTLMMENTNLKGQIPADLFSI--------PHLQTVVMK 344 (955)
Q Consensus 301 ~~---------------------------~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~Ls 344 (955)
+. .+|.. +..+++|+.|+|++|+|+ .+|..+... ++|+.|+|+
T Consensus 658 g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls 736 (876)
T 4ecn_A 658 SEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLR 736 (876)
T ss_dssp TTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECC
T ss_pred CccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECC
Confidence 31 13333 235566666666666666 444443332 256666666
Q ss_pred cCcceeeeCCCc--chhhhhhhcccCCccccccCCCCCCCcceeEecCcchhcccCccccccccCCCCCCCCCCCCCCcc
Q 002189 345 TNELNGTLDLGT--SYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNPICQELGTAKGYCQLSQPISPYSTKQKNCLPA 422 (955)
Q Consensus 345 ~N~l~~~~~~~~--~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~~c~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 422 (955)
+|+|+..+.... .+.+|+.|+|++|+|++++ ..+..+.+|+.++...|.. .+.|.+.+.+|............
T Consensus 737 ~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~lp-~~l~~L~~L~~L~Ls~N~~----ls~N~l~~~ip~~l~~L~~L~~L 811 (876)
T 4ecn_A 737 FNKLTSLSDDFRATTLPYLSNMDVSYNCFSSFP-TQPLNSSQLKAFGIRHQRD----AEGNRILRQWPTGITTCPSLIQL 811 (876)
T ss_dssp SSCCCCCCGGGSTTTCTTCCEEECCSSCCSSCC-CGGGGCTTCCEEECCCCBC----TTCCBCCCCCCTTGGGCSSCCEE
T ss_pred CCCCccchHHhhhccCCCcCEEEeCCCCCCccc-hhhhcCCCCCEEECCCCCC----cccccccccChHHHhcCCCCCEE
Confidence 666664333333 4556666666666666643 2233444555444332210 11234444455444444444444
Q ss_pred ccCCCCC
Q 002189 423 PCNANQS 429 (955)
Q Consensus 423 ~~~~~~~ 429 (955)
....|..
T Consensus 812 ~Ls~N~L 818 (876)
T 4ecn_A 812 QIGSNDI 818 (876)
T ss_dssp ECCSSCC
T ss_pred ECCCCCC
Confidence 4444443
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.2e-41 Score=372.35 Aligned_cols=280 Identities=38% Similarity=0.649 Sum_probs=229.5
Q ss_pred CcccCHHHHHHHhcCCCcc------CeeeccCceEEEEEEeCCCcEEEEEEcccCC----cchhHHHHHHHHHHHhccCC
Q 002189 615 ARCFSFEEVKKYTNNFSDA------NDVGSGGYGKVYKGTLPNGQLIAIKRAQQGS----MQGGQEFKMEIELLSRVHHK 684 (955)
Q Consensus 615 ~~~~~~~el~~~~~~f~~~------~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~ 684 (955)
...|++.++..++++|... +.||+|+||+||+|+. +++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999988 8999999999999987 57899999986532 22346789999999999999
Q ss_pred CcceEEEEEEeCCeEEEEEEecCCCCcccccCCCC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc
Q 002189 685 NLVSLLGFCFDRGEQMLIYEFVPNGSLGDSLSGKN-GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD 763 (955)
Q Consensus 685 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~ 763 (955)
||+++++++.+.+..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEc
Confidence 99999999999999999999999999999886432 346899999999999999999999998 99999999999999
Q ss_pred CCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch---HHHH
Q 002189 764 ERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY---IVRE 840 (955)
Q Consensus 764 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~---~~~~ 840 (955)
+++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|..||..... ....
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 999999999999987654433333344579999999998865 589999999999999999999999974332 1122
Q ss_pred HHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 841 IRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
........ ..+.+.+++.+. .........+.+++.+||+.||.+||+++|+++.|+++.
T Consensus 247 ~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 247 KEEIEDEE---KTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHTTS---CCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHhhhhh---hhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 22111111 112333444432 345567788999999999999999999999999999874
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.9e-41 Score=372.52 Aligned_cols=251 Identities=22% Similarity=0.388 Sum_probs=210.9
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35788999999999999999985 57899999998765555567789999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 9999999998754 5899999999999999999999998 99999999999999999999999999987654332
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLS 865 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (955)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......... +.. .
T Consensus 172 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~----------~~~--~ 237 (297)
T 3fxz_A 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGT----------PEL--Q 237 (297)
T ss_dssp -CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCS----------CCC--S
T ss_pred -ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCC----------CCC--C
Confidence 23346799999999999999999999999999999999999999975543322 221111111 111 1
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 866 TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 866 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 122334678899999999999999999999874
No 26
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.3e-42 Score=426.76 Aligned_cols=351 Identities=28% Similarity=0.418 Sum_probs=224.9
Q ss_pred hhcCCHHHHHHHHHHHhhcCCC-CCCCCCCCCCCCCCCccEEeCCCCEeEEEecCCcCccc---cCcCcCCCCcccEEec
Q 002189 20 AAVTNDNDFVILKALKDDIWEN-EPPNWKNNDPCGDNWEGIGCTNSRVTSITLSGMGLKGQ---LSGDITGLTELHTLDL 95 (955)
Q Consensus 20 ~~~~~~~~~~~L~~~k~~~~~~-~~~~w~~~~~C~~~w~gv~C~~~~v~~L~L~~~~l~~~---~~~~l~~l~~L~~L~L 95 (955)
++++.+.|.+||++||+++.+. .+.+|..+++|| .|.||+|+.++|+.|+|+++++.|. +++.+..|++|+.+++
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 3344578999999999998533 357898655553 7999999989999999999999998 7776666666666666
Q ss_pred CCCCCCccCCCCCcccccccccccccccccCCCCCC--ccccCCCCcEEEccCCCCcCcCCCCC-CCCCCcCeeecCCce
Q 002189 96 SNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPD--SIGSLQELVLLSLNSNGFSGRVPPSI-GNLSNLYWLDLTDNK 172 (955)
Q Consensus 96 s~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~L~~L~~L~L~~N~ 172 (955)
+.|. + ..+|..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|+
T Consensus 85 ~~~~-~-~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 85 SNSH-I-NGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp TTSC-E-EECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred cCCC-c-CCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 6664 2 23455666666666666666666666665 66666666666666666666555544 566666666666666
Q ss_pred eeeccCCC---CCCCCch----------------hhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCC
Q 002189 173 LEGEIPVS---DGNSPGL----------------DMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELP 233 (955)
Q Consensus 173 l~g~ip~~---~~~~~~l----------------~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p 233 (955)
+++..|.. +.+++.| ..+++|++|+|++|++++.+|. +..+++|++|+|++|++++.+|
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCccc
Confidence 66554433 2221111 2344556666666666654544 4455566666666666666666
Q ss_pred cccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCC-CCCCEEECcCCCCCCCCCChhhcCC
Q 002189 234 ATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGL-SVLSYLDMSNNSFDASEVPSWFSSM 311 (955)
Q Consensus 234 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l-~~L~~L~Ls~N~l~~~~~p~~~~~l 311 (955)
..+..+++|++|+|++|.+++.+|.. .+++|++|+|++|.+++..| .+..+ ++|++|+|++|.+++ .+|..|+++
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~-~~p~~~~~l 317 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG-AVPPFFGSC 317 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEE-CCCGGGGGC
T ss_pred HHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCC-ccchHHhcC
Confidence 66666666666666666666555544 56666666666666665444 34443 667777777776654 466666777
Q ss_pred CCCCEEECcCCcceecCCcC-CCCCCCCcEEEeecCcceeeeCCCcc-hh-hhhhhcccCCccccccCCC
Q 002189 312 QSLTTLMMENTNLKGQIPAD-LFSIPHLQTVVMKTNELNGTLDLGTS-YS-ENLLVNLQNNRISAYTERG 378 (955)
Q Consensus 312 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~-~l~~L~L~~N~l~~~~~~~ 378 (955)
++|+.|+|++|+++|.+|.. +..+++|++|+|++|++++.+|..+. +. +++.|+|++|++++..+..
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~ 387 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTT
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChh
Confidence 77777777777776666655 66677777777777777666655543 33 5666777777766554443
No 27
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.2e-42 Score=386.90 Aligned_cols=262 Identities=25% Similarity=0.443 Sum_probs=213.3
Q ss_pred hcCCCccCeeeccCceEEEEEEeC--------CCcEEEEEEcccCCcc-hhHHHHHHHHHHHhc-cCCCcceEEEEEEeC
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP--------NGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRV-HHKNLVSLLGFCFDR 696 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 696 (955)
.++|...+.||+|+||+||+|+.. ++..||||+++..... ..+.+.+|+++++++ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356788899999999999999852 3568999999865332 346789999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCcccccCCCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE
Q 002189 697 GEQMLIYEFVPNGSLGDSLSGKN--------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL 762 (955)
Q Consensus 697 ~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll 762 (955)
+..|+||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999986542 235899999999999999999999998 9999999999999
Q ss_pred cCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHH
Q 002189 763 DERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREI 841 (955)
Q Consensus 763 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~ 841 (955)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||..... .+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-~~~~ 315 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-EELF 315 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-GGHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-HHHH
Confidence 9999999999999987654433222333457789999999999999999999999999999999 9999864322 1111
Q ss_pred HHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 842 RTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 842 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
..+ ... ..+. .+......+.+++.+||+.||.+||+++|+++.|+++++..
T Consensus 316 ~~~-~~~---------~~~~----~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 316 KLL-KEG---------HRMD----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHH-HTT---------CCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHH-hcC---------CCCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111 111 0111 12233467899999999999999999999999999998653
No 28
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.7e-41 Score=373.42 Aligned_cols=263 Identities=27% Similarity=0.432 Sum_probs=205.6
Q ss_pred HhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
..++|...+.||+|+||+||+|+. +|+.||||++...... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356788899999999999999987 5889999998765433 3357899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 704 EFVPNGSLGDSLSGKN-GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 9999999999997643 224899999999999999999999875 45999999999999999999999999999865432
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....+.... ....
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-~~~~~~~~~~---------~~~~- 259 (309)
T 3p86_A 193 F--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-QVVAAVGFKC---------KRLE- 259 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-HHHHHHHHSC---------CCCC-
T ss_pred c--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcC---------CCCC-
Confidence 2 2233467999999999999999999999999999999999999999754332 2211111110 0111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.......++.+++.+||+.||.+||+++|+++.|+.++++.
T Consensus 260 ---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 260 ---IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 11223367899999999999999999999999999998654
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.3e-41 Score=372.60 Aligned_cols=262 Identities=23% Similarity=0.345 Sum_probs=218.3
Q ss_pred cccCHHHHHHHhcC----------CCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCC
Q 002189 616 RCFSFEEVKKYTNN----------FSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHK 684 (955)
Q Consensus 616 ~~~~~~el~~~~~~----------f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ 684 (955)
..+++++++.+++. |...+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46888999988875 566779999999999999975 7999999999876666667899999999999999
Q ss_pred CcceEEEEEEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC
Q 002189 685 NLVSLLGFCFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE 764 (955)
Q Consensus 685 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~ 764 (955)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence 9999999999999999999999999999988743 5899999999999999999999998 999999999999999
Q ss_pred CCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHH
Q 002189 765 RLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTV 844 (955)
Q Consensus 765 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~ 844 (955)
++.+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +....+
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-~~~~~~ 253 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAMKRL 253 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHH
T ss_pred CCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 99999999999987654322 223457999999999999999999999999999999999999999754332 222211
Q ss_pred HhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 845 MDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 845 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.. ...+... ........+.+++.+||+.||++||+++|++++
T Consensus 254 ~~----------~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 254 RD----------SPPPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HH----------SSCCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hc----------CCCCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 1111111 112234678899999999999999999999875
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=375.91 Aligned_cols=260 Identities=28% Similarity=0.457 Sum_probs=210.6
Q ss_pred cCCCccCeeeccCceEEEEEEeC----CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP----NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
++|...+.||+|+||+||+|++. .+..||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46778899999999999999974 345699999986533 3346799999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.++++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 129 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred eeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999986542 36899999999999999999999998 999999999999999999999999999877543
Q ss_pred CC-cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 783 EK-DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 783 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
.. ........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... +....+... ..
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~----------~~- 272 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-DVISSVEEG----------YR- 272 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-HHHHHHHTT----------CC-
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHcC----------CC-
Confidence 22 112233456778999999999999999999999999999999 99999654332 222211111 01
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
..........+.+++.+||+.||.+||+++|+++.|+.+++..
T Consensus 273 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 273 ---LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ---CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 1112234467899999999999999999999999999998654
No 31
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-41 Score=381.92 Aligned_cols=272 Identities=26% Similarity=0.419 Sum_probs=219.0
Q ss_pred cCHHHHHHHhcCCCccCeeeccCceEEEEEEe------CCCcEEEEEEcccCCcc-hhHHHHHHHHHHHhc-cCCCcceE
Q 002189 618 FSFEEVKKYTNNFSDANDVGSGGYGKVYKGTL------PNGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRV-HHKNLVSL 689 (955)
Q Consensus 618 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l 689 (955)
+...+.....++|...+.||+|+||.||+|++ .+++.||||+++..... ..+.+.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34445555678899999999999999999974 24689999999865433 346799999999999 79999999
Q ss_pred EEEEEeCCe-EEEEEEecCCCCcccccCCCCC------------------------------------------------
Q 002189 690 LGFCFDRGE-QMLIYEFVPNGSLGDSLSGKNG------------------------------------------------ 720 (955)
Q Consensus 690 ~~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------ 720 (955)
++++.+.+. .++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999988654 8999999999999998875432
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 721 ----------------IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 721 ----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12889999999999999999999998 99999999999999999999999999987655444
Q ss_pred cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
........||+.|+|||++.+..++.++|||||||++|||+| |..||........... ...... .+..
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~~~~~---------~~~~- 317 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-RLKEGT---------RMRA- 317 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH-HHHHTC---------CCCC-
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH-HHHcCC---------CCCC-
Confidence 344455678999999999999999999999999999999998 9999975433222222 111111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
......++.+++.+||+.||.+||+++|++++|+++++..
T Consensus 318 ---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 318 ---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 1123367889999999999999999999999999998653
No 32
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.3e-41 Score=382.69 Aligned_cols=261 Identities=28% Similarity=0.494 Sum_probs=202.3
Q ss_pred cCCCccCeeeccCceEEEEEEeC----CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP----NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
.+|...+.||+|+||+||+|+.. ++..||||+++.... ...++|.+|++++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57888999999999999999864 577899999986432 3346799999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.++++.. ...+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999754 346899999999999999999999998 999999999999999999999999999876543
Q ss_pred CCc-ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 783 EKD-HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 783 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+ ....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-~~~~~~i-~~~~----------- 267 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAV-DEGY----------- 267 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-HHHHHHH-HTTE-----------
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH-HcCC-----------
Confidence 221 11222346788999999999999999999999999999998 9999965432 1222111 1110
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
........+..+.+++.+||+.||.+||+++|+++.|+++++..+
T Consensus 268 --~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 268 --RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp --ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred --CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 011122344778999999999999999999999999999987643
No 33
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=371.79 Aligned_cols=258 Identities=23% Similarity=0.429 Sum_probs=211.5
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
++|...+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 46778899999999999999974 68999999987766666788999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDH 786 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~ 786 (955)
++|+|.++++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 90 KGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999998753 236899999999999999999999998 9999999999999999999999999998765432211
Q ss_pred e------------eeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHH----HHHHHHHhhhhh
Q 002189 787 I------------TTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIV----REIRTVMDKKKE 850 (955)
Q Consensus 787 ~------------~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~----~~~~~~~~~~~~ 850 (955)
. .....||+.|+|||++.+..++.++||||||+++|||++|..|+....... .......
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----- 240 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL----- 240 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH-----
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc-----
Confidence 0 113569999999999999999999999999999999999999885321100 0000000
Q ss_pred hhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 851 LYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.....+ ..+..+.+++.+||+.||++||+++|+++.|+++....
T Consensus 241 ----~~~~~~--------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 241 ----DRYCPP--------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp ----HHTCCT--------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----cccCCC--------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 001111 12246789999999999999999999999999987654
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.9e-41 Score=375.55 Aligned_cols=264 Identities=25% Similarity=0.357 Sum_probs=209.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCC----eEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG----EQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV 702 (955)
.++|...++||+|+||+||+|++. ++.||||+++... .....+.+|+.++++++|||||++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 357888999999999999999875 7999999987532 23345667999999999999999999998854 36999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc----------cCCCeeccCCCCccEEEcCCCceEEee
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL----------ANPPIIHRDIKSSNILLDERLNAKVAD 772 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~ivHrDlk~~NIll~~~~~~kl~D 772 (955)
|||+++|+|.++++.. .+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 101 ~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999754 489999999999999999999998 7 99999999999999999999999
Q ss_pred cccccccCCCCCcceeeeeecCCCCCCHHHhhhC-----CCCChhhhHHHHHHHHHHHhCCCCCcCCchH----------
Q 002189 773 FGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQ-----QLTEKSDVYSFGVLMLELLTGRRPIERGKYI---------- 837 (955)
Q Consensus 773 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~---------- 837 (955)
||+++...............||+.|+|||++.+. .++.++|||||||++|||+||+.||......
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999877654433333346799999999999863 4567899999999999999999998642210
Q ss_pred ----HHHHHHHHhhhhhhhhhhhccCCcCCC-CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 838 ----VREIRTVMDKKKELYNLYELIDPTIGL-STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 838 ----~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
........ ......|.+.. .........+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVV--------VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHH--------TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhh--------hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01111110 01111222211 122345677999999999999999999999999999987654
No 35
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-41 Score=387.30 Aligned_cols=260 Identities=25% Similarity=0.425 Sum_probs=211.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc-hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|++. +++.||||+++..... ..++|.+|++++++++|||||++++++.+++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356788899999999999999975 7899999998764332 23568899999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|+++|+|.++++.. +..+++..+..++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999998753 235899999999999999999999998 99999999999999999999999999986543221
Q ss_pred cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
........+++.|+|||.+.++.++.++|||||||++|||+| |..||...... .+........ .
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~---------~---- 333 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGG---------R---- 333 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTC---------C----
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC---------C----
Confidence 111122346778999999999999999999999999999998 99998654322 1111211111 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
...+..++..+.+++.+||+.||++|||++++++.|+++.++
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 334 LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 111122346789999999999999999999999999998754
No 36
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.4e-41 Score=373.19 Aligned_cols=271 Identities=25% Similarity=0.465 Sum_probs=208.6
Q ss_pred cCCCccCeeeccCceEEEEEEe-----CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeC--CeEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-----PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR--GEQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 700 (955)
++|+..+.||+|+||+||+|++ .+++.||||+++.......+.+.+|++++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5678889999999999999984 36889999999876655667899999999999999999999998654 5689
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 90 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999987543 35899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCc-ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh----hhhhhh
Q 002189 781 DSEKD-HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK----ELYNLY 855 (955)
Q Consensus 781 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~----~~~~~~ 855 (955)
..... .......++..|+|||.+.+..++.++||||||+++|||+||..|+....... .. ...... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF--MR-MIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH--HH-HHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH--Hh-hhcCccccchhHHHHH
Confidence 43221 11223446778999999999999999999999999999999999986422111 00 000000 000011
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
+.+..............++.+++.+||+.||++|||++|+++.|+++.++
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11111111122234457899999999999999999999999999999765
No 37
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.5e-41 Score=363.15 Aligned_cols=257 Identities=28% Similarity=0.497 Sum_probs=212.4
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecC
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVP 707 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 707 (955)
++|...+.||+|+||+||+|+..+++.||||+++.... ..+++.+|++++++++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 46778899999999999999998899999999986543 34679999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcce
Q 002189 708 NGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDHI 787 (955)
Q Consensus 708 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 787 (955)
+|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....... ..
T Consensus 89 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TS 163 (269)
T ss_dssp TCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HS
T ss_pred CCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc-cc
Confidence 999999986543 36899999999999999999999998 99999999999999999999999999986643221 11
Q ss_pred eeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCC
Q 002189 788 TTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLST 866 (955)
Q Consensus 788 ~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 866 (955)
.....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .+....+... ..+..
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-~~~~~~~~~~----------~~~~~---- 228 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTG----------FRLYK---- 228 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTT----------CCCCC----
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-HHHHHHHhcC----------ccCCC----
Confidence 223346778999999999999999999999999999999 8999865432 2222222111 01111
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 867 TLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 867 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
.......+.+++.+||+.||.+||+++|++++|+++.++
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 112236788999999999999999999999999998754
No 38
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.5e-40 Score=368.18 Aligned_cols=271 Identities=18% Similarity=0.252 Sum_probs=218.1
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
++|...+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5688889999999999999985 5789999999875432 34688999999999 899999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc-----eEEeecccccccC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN-----AKVADFGLSKSMS 780 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~-----~kl~DFGla~~~~ 780 (955)
+ +++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 9 99999998754 247999999999999999999999998 999999999999999887 9999999998765
Q ss_pred CCCCcc-----eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCC--chHHHHHHHHHhhhhhhhh
Q 002189 781 DSEKDH-----ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERG--KYIVREIRTVMDKKKELYN 853 (955)
Q Consensus 781 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~--~~~~~~~~~~~~~~~~~~~ 853 (955)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... ....+....+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~-- 239 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT-- 239 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS--
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC--
Confidence 433211 123567999999999999999999999999999999999999999753 22333333222211100
Q ss_pred hhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCC
Q 002189 854 LYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNPNAESAS 916 (955)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 916 (955)
..+... ...+ ++.+++.+||+.||.+||+++++++.|+++.++.+........|
T Consensus 240 ~~~~~~--------~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw 293 (330)
T 2izr_A 240 PIEVLC--------ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 293 (330)
T ss_dssp CHHHHT--------TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTT
T ss_pred CHHHHh--------ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccC
Confidence 000000 0122 78999999999999999999999999999999887655443333
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-40 Score=363.38 Aligned_cols=262 Identities=23% Similarity=0.410 Sum_probs=207.5
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
.++|...+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 356888999999999999999864 689999999864332 2336789999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.+++...+ .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999987543 6899999999999999999999998 999999999999999999999999999876543
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
.. .......||+.|+|||.+.+..++.++||||||+++|||+||+.||........... ...... +..
T Consensus 165 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-~~~~~~----------~~~ 232 (294)
T 4eqm_A 165 SL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK-HIQDSV----------PNV 232 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH-HHSSCC----------CCH
T ss_pred cc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HhhccC----------CCc
Confidence 22 223346799999999999999999999999999999999999999976543322221 111110 000
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRP-TMSEVVKDIENILQQ 905 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~ 905 (955)
........+..+.+++.+||+.||.+|| +++++.+.|+.++..
T Consensus 233 ~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 233 TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 0011112336788999999999999998 899999988877533
No 40
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=379.56 Aligned_cols=264 Identities=25% Similarity=0.424 Sum_probs=215.8
Q ss_pred hcCCCccCeeeccCceEEEEEEeC--------CCcEEEEEEcccCCcc-hhHHHHHHHHHHHhc-cCCCcceEEEEEEeC
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP--------NGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRV-HHKNLVSLLGFCFDR 696 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 696 (955)
.++|...+.||+|+||+||+|+.. ++..||||+++..... ..+.+.+|+++++++ +|||||++++++.++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356788899999999999999852 2468999999765333 346789999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCcccccCCCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE
Q 002189 697 GEQMLIYEFVPNGSLGDSLSGKN--------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL 762 (955)
Q Consensus 697 ~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll 762 (955)
+..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 99999999999999999886543 235899999999999999999999998 9999999999999
Q ss_pred cCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHH
Q 002189 763 DERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREI 841 (955)
Q Consensus 763 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~ 841 (955)
++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ..+..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~-~~~~~ 303 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELF 303 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHH
Confidence 9999999999999987755433233344567889999999999999999999999999999999 999986433 22222
Q ss_pred HHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCC
Q 002189 842 RTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGL 908 (955)
Q Consensus 842 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 908 (955)
..+ .... .+. .......++.+++.+||+.||++||+++|++++|++++.....
T Consensus 304 ~~~-~~~~---------~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 304 KLL-KEGH---------RMD----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp HHH-HTTC---------CCC----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred HHH-HcCC---------CCC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 211 1111 111 1122346789999999999999999999999999999877543
No 41
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-40 Score=371.05 Aligned_cols=254 Identities=26% Similarity=0.403 Sum_probs=206.3
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 457889999999999999999865 789999999865432 223568899999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 999999999997553 6899999999999999999999998 99999999999999999999999999987643333
Q ss_pred cceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
........||+.|+|||++.+..+ +.++|||||||++|||++|+.||.................. ..+
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------~~~---- 229 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------YLN---- 229 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT-------TST----
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc-------cCC----
Confidence 233345679999999999987775 77999999999999999999999754433222222111110 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........+.+++.+||+.||.+|||++|++++
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112233678899999999999999999999875
No 42
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-40 Score=370.20 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=206.8
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788899999999999999986 579999999987542 233467889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.+++...+ .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999986543 5899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCC-ChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLT-EKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .....||+.|+|||++.+..++ .++||||+||++|||++|+.||.... .......+..... ..
T Consensus 169 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~-----------~~ 233 (328)
T 3fe3_A 169 K---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-LKELRERVLRGKY-----------RI 233 (328)
T ss_dssp G---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCC-----------CC
T ss_pred c---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCC-----------CC
Confidence 2 2345799999999999988875 78999999999999999999996543 2222222221110 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+.....++.+++.+||+.||.+|||++|++++
T Consensus 234 ----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 ----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11123678899999999999999999999875
No 43
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=371.88 Aligned_cols=250 Identities=22% Similarity=0.377 Sum_probs=200.0
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 56788999999999999999986 5789999999876432 234578999999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|+++|+|.+++...+ .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........
T Consensus 89 ~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999986544 6899999999999999999999998 99999999999999999999999999986543322
Q ss_pred cceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
.......||+.|+|||++.+..+ +.++||||+||++|||++|..||.... .......+..... ..
T Consensus 164 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~-----------~~- 229 (347)
T 3zgw_A 164 -YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-VMALYKKIMRGKY-----------DV- 229 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCC-----------CC-
T ss_pred -ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHcCCC-----------CC-
Confidence 22344679999999999998775 899999999999999999999997543 2233333222111 01
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+......+.+++.+||+.||.+|||++|++++
T Consensus 230 ---p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 ---PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ---CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 11123567899999999999999999999986
No 44
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=383.24 Aligned_cols=262 Identities=25% Similarity=0.406 Sum_probs=211.7
Q ss_pred cCCCccCeeeccCceEEEEEEeC------CCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP------NGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 700 (955)
++|...+.||+|+||+||+|++. +++.||||+++... .....++.+|+.++++++|||||++++++.+.+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56788899999999999999853 46789999997543 334457889999999999999999999999999999
Q ss_pred EEEEecCCCCcccccCCCC-----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC---ceEEee
Q 002189 701 LIYEFVPNGSLGDSLSGKN-----GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL---NAKVAD 772 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~---~~kl~D 772 (955)
+||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999986532 245899999999999999999999998 99999999999999554 599999
Q ss_pred cccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhh
Q 002189 773 FGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKEL 851 (955)
Q Consensus 773 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 851 (955)
||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||..... .+....+....
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-~~~~~~i~~~~--- 303 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGG--- 303 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTC---
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCC---
Confidence 999986533222222334568899999999999999999999999999999998 9999865432 22222221111
Q ss_pred hhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 852 YNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 852 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
. ..........+.+++.+||+.||.+||+++|++++|+.+.+..+
T Consensus 304 -------~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 304 -------R----MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp -------C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred -------C----CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 0 01112234678899999999999999999999999999976543
No 45
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.1e-40 Score=365.32 Aligned_cols=263 Identities=25% Similarity=0.418 Sum_probs=216.7
Q ss_pred hcCCCccCeeeccCceEEEEEEe------CCCcEEEEEEcccCCc-chhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL------PNGQLIAIKRAQQGSM-QGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGE 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 698 (955)
.++|...+.||+|+||+||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35688889999999999999984 3468999999986543 3346789999999999 89999999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCC----------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNG----------------IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL 762 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll 762 (955)
.++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence 9999999999999998865432 25899999999999999999999998 9999999999999
Q ss_pred cCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHH
Q 002189 763 DERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREI 841 (955)
Q Consensus 763 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~ 841 (955)
+.++.+||+|||+++...............||+.|+|||.+.+..++.++||||||+++|||+| |..||.........
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~- 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF- 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH-
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH-
Confidence 9999999999999987765544333444568889999999999999999999999999999999 99998754332221
Q ss_pred HHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 842 RTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 842 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
....... ..+. ........+.+++.+||+.||.+||+++|+++.|+++++..
T Consensus 258 ~~~~~~~---------~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 258 YKMIKEG---------FRML----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHT---------CCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHhccC---------CCCC----CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1111111 1111 11123367899999999999999999999999999998764
No 46
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.8e-41 Score=391.00 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=212.4
Q ss_pred HhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
..++|...+.||+|+||+||+|++.+++.||||+++... ...++|.+|+++|++++|||||++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 356788889999999999999999888999999998654 34678999999999999999999999986 6678999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|+|.++++......+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~- 339 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 339 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-
Confidence 99999999998654456889999999999999999999998 99999999999999999999999999987643211
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGL 864 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (955)
.......+|+.|+|||++..+.++.++|||||||++|||+| |+.||..... .+....+... . . .
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-~~~~~~i~~~-~---------~----~ 404 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-PEVIRALERG-Y---------R----M 404 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHHT-C---------C----C
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcC-C---------C----C
Confidence 11223346788999999999999999999999999999999 9999965432 2222222111 0 0 0
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 865 STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 865 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
..+..++.++.+++.+||+.||++|||+++|++.|+.+.
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 111234478899999999999999999999999998775
No 47
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-40 Score=368.54 Aligned_cols=262 Identities=27% Similarity=0.443 Sum_probs=214.0
Q ss_pred hcCCCccCeeeccCceEEEEEEe------CCCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL------PNGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 699 (955)
.++|...+.||+|+||+||+|+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45678889999999999999985 2458999999976433 3346789999999999999999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCC
Q 002189 700 MLIYEFVPNGSLGDSLSGKNG----------------------IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKS 757 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~ 757 (955)
++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence 999999999999999875432 34889999999999999999999998 99999999
Q ss_pred ccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCch
Q 002189 758 SNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKY 836 (955)
Q Consensus 758 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~ 836 (955)
+||++++++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987755433222334557888999999999999999999999999999999 9999864332
Q ss_pred HHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 837 IVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
. ... ....... .+. ........+.+++.+||+.||++||+++|++++|+++++++
T Consensus 259 ~-~~~-~~~~~~~---------~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 313 (314)
T 2ivs_A 259 E-RLF-NLLKTGH---------RME----RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313 (314)
T ss_dssp G-GHH-HHHHTTC---------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred H-HHH-HHhhcCC---------cCC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhhc
Confidence 1 111 1111110 111 11233467899999999999999999999999999998653
No 48
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.8e-40 Score=384.70 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=209.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCC-eEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG-EQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|++. |+.||||+++... ..+.|.+|+++|++++|||||++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 356778899999999999999985 7899999998654 4578999999999999999999999988765 78999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|+|.++++..+...+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 99999999998665555899999999999999999999998 999999999999999999999999999865322
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGL 864 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (955)
.....+++.|+|||++.+..++.++|||||||++|||+| |+.||...... +....+. ... . .
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-~~~~~i~-~~~---------~----~ 405 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVE-KGY---------K----M 405 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-THHHHHH-TTC---------C----C
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH-cCC---------C----C
Confidence 122357899999999999999999999999999999998 99999643321 1111111 110 0 1
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 865 STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 865 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
..+..++..+.+++.+||+.||.+|||++|+++.|+.+...
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11223447889999999999999999999999999998754
No 49
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=374.06 Aligned_cols=263 Identities=25% Similarity=0.422 Sum_probs=213.2
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC------CCcEEEEEEcccCCcc-hhHHHHHHHHHHHhccCCCcceEEEEEEeCCe
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP------NGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE 698 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 698 (955)
..++|...+.||+|+||+||+|+.. +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578899999999999999999874 3489999999865333 34679999999999999999999999999999
Q ss_pred EEEEEEecCCCCcccccCCCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCC
Q 002189 699 QMLIYEFVPNGSLGDSLSGKN----------------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIK 756 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk 756 (955)
.++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 999999999999999886532 146899999999999999999999998 9999999
Q ss_pred CccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCc
Q 002189 757 SSNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGK 835 (955)
Q Consensus 757 ~~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~ 835 (955)
|+||++++++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999987654332223344568899999999999999999999999999999999 999996543
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 836 YIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
. .+....+... . .+. ........+.+++.+||+.||++||+++|+++.|+++.++.
T Consensus 282 ~-~~~~~~~~~~-~---------~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 H-EEVIYYVRDG-N---------ILA----CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp H-HHHHHHHHTT-C---------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred h-HHHHHHHhCC-C---------cCC----CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 2 2222211111 0 001 11223467899999999999999999999999999986543
No 50
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-39 Score=357.13 Aligned_cols=265 Identities=19% Similarity=0.253 Sum_probs=214.9
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
++|...+.||+|+||+||+|+. .+|+.||||++.... ..+.+.+|+++++.+ +|+|++++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 5688899999999999999985 578999999986543 235688999999999 799999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc-----eEEeecccccccC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN-----AKVADFGLSKSMS 780 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~-----~kl~DFGla~~~~ 780 (955)
+ +++|.+++...+ ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++. +||+|||+++...
T Consensus 88 ~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 88 L-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred c-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 9 999999987543 36899999999999999999999988 999999999999987776 9999999998775
Q ss_pred CCCCc-----ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCc--hHHHHHHHHHhhhhhhhh
Q 002189 781 DSEKD-----HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGK--YIVREIRTVMDKKKELYN 853 (955)
Q Consensus 781 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~--~~~~~~~~~~~~~~~~~~ 853 (955)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........+...... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~ 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS-TP 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-SC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-cc
Confidence 43321 12234679999999999999999999999999999999999999997532 222222222221110 00
Q ss_pred hhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCC
Q 002189 854 LYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLN 909 (955)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 909 (955)
..+ ..+ ..+..+.+++.+||+.||++||++++|++.|++++++.+..
T Consensus 242 ~~~-~~~--------~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 242 LRE-LCA--------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp HHH-HTT--------TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHH-HHh--------hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 001 111 12367899999999999999999999999999999887643
No 51
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.8e-40 Score=361.90 Aligned_cols=258 Identities=27% Similarity=0.461 Sum_probs=210.3
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
.++|...+.||+|+||+||+|++.++..||||+++..... .+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 3567888999999999999999988889999999865433 467999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDH 786 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~ 786 (955)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....... .
T Consensus 102 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~ 176 (283)
T 3gen_A 102 ANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-T 176 (283)
T ss_dssp TTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-H
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccccc-c
Confidence 9999999987532 36899999999999999999999998 99999999999999999999999999987643221 1
Q ss_pred eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCC
Q 002189 787 ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLS 865 (955)
Q Consensus 787 ~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (955)
......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +....+... ..+..
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-~~~~~~~~~----------~~~~~--- 242 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQG----------LRLYR--- 242 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTT----------CCCCC---
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-HHHHHHhcc----------cCCCC---
Confidence 1222346778999999999999999999999999999998 99999754332 222211111 11111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 866 TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 866 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
.......+.+++.+||+.||.+||+++|++++|++++.+
T Consensus 243 -~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 243 -PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 112236788999999999999999999999999999865
No 52
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.6e-40 Score=368.28 Aligned_cols=252 Identities=25% Similarity=0.349 Sum_probs=207.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc------hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ------GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 699 (955)
.+.|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457888999999999999999865 6899999998764332 246799999999999999999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC----ceEEeeccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL----NAKVADFGL 775 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DFGl 775 (955)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 99999999999999997643 6899999999999999999999998 99999999999998877 799999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLY 855 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (955)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|..||..... .+....+.....
T Consensus 166 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-~~~~~~i~~~~~------ 235 (361)
T 2yab_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITAVSY------ 235 (361)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTTCC------
T ss_pred ceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCC------
Confidence 987654322 2345799999999999999999999999999999999999999965432 222222221110
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+++.. .......+.+++.+||..||.+|||++|++++
T Consensus 236 -~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 236 -DFDEEF----FSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -CCCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CCCchh----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001000 01123568899999999999999999999863
No 53
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=372.06 Aligned_cols=263 Identities=23% Similarity=0.388 Sum_probs=212.0
Q ss_pred hcCCCccCeeeccCceEEEEEEe------CCCcEEEEEEcccCC-cchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL------PNGQLIAIKRAQQGS-MQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGE 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 698 (955)
.++|...+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788899999999999999985 245689999997542 23446799999999999 89999999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCC
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNG---------------------IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKS 757 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~ 757 (955)
.++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCh
Confidence 9999999999999999875432 24799999999999999999999998 99999999
Q ss_pred ccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCch
Q 002189 758 SNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKY 836 (955)
Q Consensus 758 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~ 836 (955)
+||+++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999987654443334445678899999999999999999999999999999998 9999975433
Q ss_pred HHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 837 IVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
... ........ ..+. ........+.+++.+||+.||.+||+++|++++|+.+++..
T Consensus 281 ~~~-~~~~~~~~---------~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 281 DAN-FYKLIQNG---------FKMD----QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp SHH-HHHHHHTT---------CCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHH-HHHHHhcC---------CCCC----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 222 11121111 1111 11223467899999999999999999999999999987553
No 54
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.3e-40 Score=360.02 Aligned_cols=257 Identities=26% Similarity=0.453 Sum_probs=212.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
.++|...+.||+|+||+||+|+..++..||||+++.... ..+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 356788899999999999999998888999999986543 3467999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDH 786 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~ 786 (955)
++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... .
T Consensus 86 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 160 (268)
T 3sxs_A 86 SNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-V 160 (268)
T ss_dssp TTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-E
T ss_pred CCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhh-h
Confidence 9999999986542 35899999999999999999999998 99999999999999999999999999987654322 2
Q ss_pred eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCC
Q 002189 787 ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLS 865 (955)
Q Consensus 787 ~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (955)
......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +......... ....|
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~~~-------~~~~~----- 227 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-EVVLKVSQGH-------RLYRP----- 227 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTC-------CCCCC-----
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-HHHHHHHcCC-------CCCCC-----
Confidence 2233456678999999999999999999999999999999 99999654332 2111111110 01111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 002189 866 TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQ 904 (955)
Q Consensus 866 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 904 (955)
......+.+++.+||+.||.+|||++|+++.|+.+.+
T Consensus 228 --~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 228 --HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp --TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred --CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1123578899999999999999999999999988743
No 55
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-40 Score=369.81 Aligned_cols=266 Identities=24% Similarity=0.388 Sum_probs=197.5
Q ss_pred hcCCCccCeeeccCceEEEEEEeCC-C---cEEEEEEcccC--CcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE-
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPN-G---QLIAIKRAQQG--SMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ- 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~- 699 (955)
.++|...+.||+|+||+||+|+... + ..||||+++.. .....+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4578899999999999999998653 3 27999999764 334457899999999999999999999999887655
Q ss_pred -----EEEEEecCCCCcccccCCCC----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEE
Q 002189 700 -----MLIYEFVPNGSLGDSLSGKN----GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKV 770 (955)
Q Consensus 700 -----~lV~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 770 (955)
++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEE
Confidence 99999999999999885422 235899999999999999999999998 999999999999999999999
Q ss_pred eecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhh
Q 002189 771 ADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 771 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||...... +.........
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~- 256 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGN- 256 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTC-
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-HHHHHHhcCC-
Confidence 99999987655443333334567889999999999999999999999999999999 89998654332 1111111111
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNP 910 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 910 (955)
. ..........+.+++.+||+.||.+||+++|+++.|+++++......
T Consensus 257 ---------~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 257 ---------R----LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp ---------C----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred ---------C----CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 0 11112334678999999999999999999999999999998765433
No 56
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-40 Score=370.47 Aligned_cols=257 Identities=26% Similarity=0.459 Sum_probs=202.6
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCc----EEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQ----LIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
++|...+.||+|+||+||+|++. +++ +||+|.++... ....+++.+|++++++++||||++++++|.+.+ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46788899999999999999864 444 46888886432 234578999999999999999999999998754 789
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999987543 36899999999999999999999998 99999999999999999999999999988765
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
...........+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... . +........
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~-~~~~~~~~~----------- 236 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-E-ISSILEKGE----------- 236 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-G-HHHHHHTTC-----------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-H-HHHHHHcCC-----------
Confidence 544333444567889999999999999999999999999999999 99999643321 1 111111111
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQ 904 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 904 (955)
...........+.+++.+||+.||.+||+++|++++|+.+.+
T Consensus 237 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 237 --RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111122234678999999999999999999999999999864
No 57
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.1e-40 Score=360.89 Aligned_cols=261 Identities=26% Similarity=0.455 Sum_probs=204.9
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
++|...+.||+|+||+||+|+.. ..+|||+++.... ...+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 57888999999999999999864 4689998875433 23467899999999999999999999764 5668999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|+|.+++... ...+++.+++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++........
T Consensus 113 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 113 CEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred CCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999998644 346899999999999999999999998 999999999999999999999999999865432222
Q ss_pred ceeeeeecCCCCCCHHHhh---hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 786 HITTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~---~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
.......||+.|+|||++. +..++.++|||||||++|||++|+.||........... ...... ..+.+
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-~~~~~~--------~~~~~ 259 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF-MVGRGY--------ASPDL 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH-HHHHTC--------CCCCS
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHH-HHhcCC--------CCcch
Confidence 3334467999999999997 56789999999999999999999999975544332222 211111 11211
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
. .....+...+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 260 ~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 260 S-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp T-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred h-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 1 11123346789999999999999999999999999988643
No 58
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=362.02 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=206.5
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc------hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ------GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 699 (955)
.+.|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356888999999999999999865 6899999998754322 346799999999999999999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC----ceEEeeccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL----NAKVADFGL 775 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DFGl 775 (955)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 99999999999999997543 6899999999999999999999998 99999999999999887 799999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLY 855 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (955)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|..||..... .+....+.....
T Consensus 165 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~~~~~~~------ 234 (326)
T 2y0a_A 165 AHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY------ 234 (326)
T ss_dssp CEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHTCC------
T ss_pred CeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-HHHHHHHHhcCC------
Confidence 987653322 2345699999999999999999999999999999999999999965432 222222211110
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.............+.+++.+||+.||.+|||++|++++
T Consensus 235 -----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 -----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp -----CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -----CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000001123568899999999999999999999974
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.7e-40 Score=362.54 Aligned_cols=258 Identities=26% Similarity=0.382 Sum_probs=202.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHh--ccCCCcceEEEEEEeC----CeEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSR--VHHKNLVSLLGFCFDR----GEQM 700 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----~~~~ 700 (955)
.++|...+.||+|+||+||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++.+. ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46788999999999999999988 6899999998643 34566777777776 7899999999997653 4579
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hccCCCeeccCCCCccEEEcCCCceEEee
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLH--------ELANPPIIHRDIKSSNILLDERLNAKVAD 772 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlk~~NIll~~~~~~kl~D 772 (955)
+||||+++|+|.++++.. .+++..++.++.|+++||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 999999999999999643 6899999999999999999999 767 99999999999999999999999
Q ss_pred cccccccCCCCCcc--eeeeeecCCCCCCHHHhhhC------CCCChhhhHHHHHHHHHHHhC----------CCCCcCC
Q 002189 773 FGLSKSMSDSEKDH--ITTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVLMLELLTG----------RRPIERG 834 (955)
Q Consensus 773 FGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~ksDvwS~Gv~l~elltg----------~~P~~~~ 834 (955)
||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99998765433211 11234799999999999876 455799999999999999999 7887532
Q ss_pred c---hHHHHHHHHHhhhhhhhhhhhccCCcCCC-CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q 002189 835 K---YIVREIRTVMDKKKELYNLYELIDPTIGL-STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENI 902 (955)
Q Consensus 835 ~---~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 902 (955)
. ............ ....+.... .........+.+++.+||+.||.+|||++|+++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDPSFEDMRKVVCV--------DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSSCCHHHHHHHHTT--------SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcchhhhhHHHhc--------cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 111222221111 111122211 12234667899999999999999999999999999876
No 60
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-40 Score=387.63 Aligned_cols=258 Identities=29% Similarity=0.469 Sum_probs=207.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
.++|...+.||+|+||+||+|++.++..||||+++.... ..++|.+|+++|++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 456788899999999999999998888899999986543 35689999999999999999999999866 6789999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDH 786 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~ 786 (955)
++|+|.++++...+..+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++....... .
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce-e
Confidence 9999999997644446899999999999999999999998 99999999999999999999999999987653322 2
Q ss_pred eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCC
Q 002189 787 ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLS 865 (955)
Q Consensus 787 ~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (955)
......+++.|+|||++.++.++.++|||||||++|||+| |+.||..... .+....+. ... . ..
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-~~~~~~i~-~~~---------~----~~ 401 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVE-RGY---------R----MP 401 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHH-TTC---------C----CC
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-cCC---------C----CC
Confidence 2233457889999999999999999999999999999999 8999865432 22222211 110 0 11
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 866 TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 866 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
.+..++..+.+++.+||+.||++|||++++++.|+.+...
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 1223446789999999999999999999999999987533
No 61
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-40 Score=392.42 Aligned_cols=257 Identities=29% Similarity=0.454 Sum_probs=213.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeCC-CcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPN-GQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
..+|...+.||+|+||+||+|++.. +..||||+++.... ..++|.+|+++|++++|||||+++++|.+.+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4567888999999999999999764 88999999986543 357899999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|+|.++++......+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY- 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCce-
Confidence 99999999998665567999999999999999999999998 99999999999999999999999999987643321
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGL 864 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (955)
.......+++.|+|||++.+..++.++|||||||++|||+| |..||...... +.. ..+... ...
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-~~~-~~~~~~-------------~~~ 438 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVY-ELLEKD-------------YRM 438 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHH-HHHHTT-------------CCC
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-HHH-HHHHcC-------------CCC
Confidence 22223456778999999999999999999999999999999 88998643321 111 111111 111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 865 STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 865 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
.....+...+.+++.+||+.||.+||+++|+++.|+.++
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 122234478899999999999999999999999998764
No 62
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.9e-40 Score=364.37 Aligned_cols=271 Identities=26% Similarity=0.419 Sum_probs=211.7
Q ss_pred CCccCeeeccCceEEEEEEeC-----CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeC--CeEEE
Q 002189 630 FSDANDVGSGGYGKVYKGTLP-----NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDR--GEQML 701 (955)
Q Consensus 630 f~~~~~lG~G~fg~Vy~~~~~-----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 701 (955)
|...+.||+|+||+||++++. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 477899999999999998753 688999999986533 3356789999999999999999999999884 57899
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999754 4899999999999999999999998 99999999999999999999999999987754
Q ss_pred CCCc-ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 782 SEKD-HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 782 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
.... .......+|..|+|||++.+..++.++||||||+++|||+||+.||......................+.+.+..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 4321 122345678889999999999999999999999999999999999864322111100000000000001111111
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.............+.+++.+||+.||.+||+++|+++.|+.+.++.
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 1112223344578999999999999999999999999999998765
No 63
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.9e-40 Score=364.24 Aligned_cols=272 Identities=26% Similarity=0.412 Sum_probs=219.3
Q ss_pred CHHHHHHHhcCCCccCeeeccCceEEEEEEe------CCCcEEEEEEcccCCcc-hhHHHHHHHHHHHhc-cCCCcceEE
Q 002189 619 SFEEVKKYTNNFSDANDVGSGGYGKVYKGTL------PNGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRV-HHKNLVSLL 690 (955)
Q Consensus 619 ~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~l~ 690 (955)
...+.....++|...+.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|++++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444445567899999999999999999974 35689999999865433 346789999999999 799999999
Q ss_pred EEEEeCC-eEEEEEEecCCCCcccccCCCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCC
Q 002189 691 GFCFDRG-EQMLIYEFVPNGSLGDSLSGKNG--------------IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDI 755 (955)
Q Consensus 691 ~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 755 (955)
+++...+ ..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccC
Confidence 9998755 48999999999999999876542 12889999999999999999999998 999999
Q ss_pred CCccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCC
Q 002189 756 KSSNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERG 834 (955)
Q Consensus 756 k~~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~ 834 (955)
||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||+| |..||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987655443333445678999999999999999999999999999999998 99999654
Q ss_pred chHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 835 KYIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
........... ... .+.. .......+.+++.+||+.||.+||+++|++++|+.+++...
T Consensus 255 ~~~~~~~~~~~-~~~---------~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 255 KIDEEFCRRLK-EGT---------RMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCSHHHHHHHH-HTC---------CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHhc-cCc---------cCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 33222222111 111 0111 11223678899999999999999999999999999987653
No 64
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=361.47 Aligned_cols=252 Identities=20% Similarity=0.281 Sum_probs=208.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +++.||+|.++.. ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467888999999999999999865 6889999998754 33456788999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC--CCceEEeecccccccCCCC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE--RLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~--~~~~kl~DFGla~~~~~~~ 783 (955)
+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 83 ISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999987542 36899999999999999999999998 999999999999997 7899999999998775432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
......||+.|+|||++.+..++.++|||||||++|||++|..||..... .+....+...... .++.
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~-------~~~~-- 225 (321)
T 1tki_A 159 ---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENIMNAEYT-------FDEE-- 225 (321)
T ss_dssp ---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC-------CCHH--
T ss_pred ---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-HHHHHHHHcCCCC-------CChh--
Confidence 23456799999999999988899999999999999999999999965432 2223222221110 0000
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......++.+++.+||+.||.+|||++|++++
T Consensus 226 --~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 --AFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001123678899999999999999999999986
No 65
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.4e-40 Score=372.59 Aligned_cols=280 Identities=16% Similarity=0.194 Sum_probs=212.5
Q ss_pred hcCCCccCeeeccCceEEEEEEeCC------CcEEEEEEcccCCcchh-----------HHHHHHHHHHHhccCCCcceE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPN------GQLIAIKRAQQGSMQGG-----------QEFKMEIELLSRVHHKNLVSL 689 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~l 689 (955)
.++|...+.||+|+||+||+|++.+ ++.||||++........ ..+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578889999999999999998754 47899999875432111 123345566777789999999
Q ss_pred EEEEEeC----CeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc--
Q 002189 690 LGFCFDR----GEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD-- 763 (955)
Q Consensus 690 ~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~-- 763 (955)
++++... ...+|||||+ +++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 9999875 4579999999 99999998754 346999999999999999999999998 99999999999999
Q ss_pred CCCceEEeecccccccCCCCCc-----ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHH
Q 002189 764 ERLNAKVADFGLSKSMSDSEKD-----HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIV 838 (955)
Q Consensus 764 ~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~ 838 (955)
.++.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999876533211 11123459999999999999999999999999999999999999997533222
Q ss_pred HHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCC
Q 002189 839 REIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNPNAESAS 916 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 916 (955)
........... ..+.+.+++.+. ....+.++.+++.+||+.||.+||+++++++.|+++++..+........|
T Consensus 269 ~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw 341 (364)
T 3op5_A 269 KYVRDSKIRYR--ENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL 341 (364)
T ss_dssp HHHHHHHHHHH--HCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC
T ss_pred HHHHHHHHHhh--hhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccce
Confidence 22221111111 011222222211 01223678999999999999999999999999999999887655443333
No 66
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.4e-40 Score=354.98 Aligned_cols=253 Identities=30% Similarity=0.513 Sum_probs=197.2
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc----hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ----GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|++. |+.||||+++..... ..+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 46788899999999999999974 899999998754322 2367899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC--------CCceEEeeccc
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE--------RLNAKVADFGL 775 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~--------~~~~kl~DFGl 775 (955)
||+++++|.+++... .+++..+..++.|+++||+|||+.+..+|+||||||+||+++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999999988643 6899999999999999999999987556899999999999986 77899999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLY 855 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (955)
++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ......
T Consensus 163 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~-------- 229 (271)
T 3dtc_A 163 AREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA-YGVAMN-------- 229 (271)
T ss_dssp -----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH-HHHHTS--------
T ss_pred cccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HhhhcC--------
Confidence 98664332 22356999999999999999999999999999999999999999754432211 111111
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENI 902 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 902 (955)
... ..........+.+++.+||+.||.+||+++|++++|+++
T Consensus 230 -~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 -KLA----LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCC----CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 011 111223346789999999999999999999999998753
No 67
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.8e-40 Score=365.59 Aligned_cols=248 Identities=23% Similarity=0.278 Sum_probs=206.1
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 56888999999999999999865 68999999987532 223456889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999887543 6899999999999999999999998 9999999999999999999999999998643322
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... ...
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~-----------~~~- 224 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILMEE-----------IRF- 224 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCC-----------CCC-
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-HHHHHHHHcCC-----------CCC-
Confidence 223456799999999999999999999999999999999999999965432 22222222111 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRP-----TMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 898 (955)
+.....++.+++.+||+.||.+|| +++|++++
T Consensus 225 ---p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 ---PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112236788999999999999999 89999875
No 68
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.8e-40 Score=370.02 Aligned_cols=275 Identities=25% Similarity=0.393 Sum_probs=212.4
Q ss_pred cCCCccCeeeccCceEEEEEEe-----CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEe--CCeEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-----PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFD--RGEQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 700 (955)
++|...+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. .+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4678889999999999999984 3688999999987666666789999999999999999999999874 55689
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999987532 25899999999999999999999998 9999999999999999999999999998775
Q ss_pred CCCCcc-eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 781 DSEKDH-ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 781 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
...... ......||..|+|||.+.+..++.++||||||+++|||++|+.||......................+.+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 433211 1223457888999999999999999999999999999999999986432211000000000000000111111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
..............+.+++.+||+.||.+||+++|++++|+.+....
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11112223344578899999999999999999999999999887554
No 69
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.6e-40 Score=364.11 Aligned_cols=272 Identities=25% Similarity=0.411 Sum_probs=207.3
Q ss_pred cCCCccCeeeccCceEEEEEEe-----CCCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeC--CeE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-----PNGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR--GEQ 699 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 699 (955)
+.|...+.||+|+||+||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3477889999999999999984 368999999987543 23346789999999999999999999999876 668
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999999999999985432 36899999999999999999999998 999999999999999999999999999877
Q ss_pred CCCCCc-ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhcc
Q 002189 780 SDSEKD-HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELI 858 (955)
Q Consensus 780 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (955)
...... .......||..|+|||.+.+..++.++||||||+++|||+||..|+......................+...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 543321 1222345778899999999999999999999999999999999986432211110000000000000011111
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 859 DPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 859 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
...............+.+++.+||+.||.+|||++|+++.|++++
T Consensus 257 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111122234478899999999999999999999999999886
No 70
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.9e-40 Score=355.98 Aligned_cols=259 Identities=30% Similarity=0.470 Sum_probs=212.9
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecC
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVP 707 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 707 (955)
++|...+.||+|+||+||+|+..+++.||||+++.... ..+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 56788899999999999999988888999999976543 3577999999999999999999999876 456899999999
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcce
Q 002189 708 NGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDHI 787 (955)
Q Consensus 708 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 787 (955)
+++|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....... ..
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 166 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TA 166 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-EC
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCccc-cc
Confidence 999999997654446899999999999999999999998 99999999999999999999999999987654321 12
Q ss_pred eeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCC
Q 002189 788 TTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLST 866 (955)
Q Consensus 788 ~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 866 (955)
.....++..|+|||.+.++.++.++||||||+++|||++ |+.||..... .+....+... ..+. .
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~----------~~~~----~ 231 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNLERG----------YRMV----R 231 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTT----------CCCC----C
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-HHHHHHHhcc----------cCCC----C
Confidence 223457789999999999999999999999999999999 8989865432 2222211111 0111 1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 867 TLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 867 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
.......+.+++.+||+.||++||+++++++.|+++.....
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 12234678999999999999999999999999999987653
No 71
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=357.78 Aligned_cols=249 Identities=23% Similarity=0.367 Sum_probs=198.3
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc--------------------------hhHHHHHHHHHHHh
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ--------------------------GGQEFKMEIELLSR 680 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~ 680 (955)
++|...+.||+|+||+||+|+. .+++.||||++...... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5788899999999999999986 46899999998754321 12568899999999
Q ss_pred ccCCCcceEEEEEEe--CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCc
Q 002189 681 VHHKNLVSLLGFCFD--RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSS 758 (955)
Q Consensus 681 l~H~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~ 758 (955)
++||||+++++++.+ .+..++||||+++|+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHH
Confidence 999999999999987 56789999999999999876543 6899999999999999999999998 999999999
Q ss_pred cEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCC---CCChhhhHHHHHHHHHHHhCCCCCcCCc
Q 002189 759 NILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQ---LTEKSDVYSFGVLMLELLTGRRPIERGK 835 (955)
Q Consensus 759 NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDvwS~Gv~l~elltg~~P~~~~~ 835 (955)
||+++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999998765432 2234467999999999998665 3778999999999999999999997543
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 836 YIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. ......+.... .. .........++.+++.+||+.||++||+++|++++
T Consensus 245 ~-~~~~~~~~~~~---------~~----~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 I-MCLHSKIKSQA---------LE----FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp H-HHHHHHHHHCC---------CC----CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred H-HHHHHHHhccc---------CC----CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 2 12211111110 00 00111233678999999999999999999999864
No 72
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.6e-40 Score=381.32 Aligned_cols=264 Identities=23% Similarity=0.293 Sum_probs=212.5
Q ss_pred CHHHHHHHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEE
Q 002189 619 SFEEVKKYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCF 694 (955)
Q Consensus 619 ~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 694 (955)
.+.+++...++|...++||+|+||+||+|+.. +++.||||++++... ...+.+.+|+.++..++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555566789999999999999999999975 578999999875221 12234889999999999999999999999
Q ss_pred eCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecc
Q 002189 695 DRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFG 774 (955)
Q Consensus 695 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFG 774 (955)
+++..|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchh
Confidence 9999999999999999999997632 36899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCHHHhh-----hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh
Q 002189 775 LSKSMSDSEKDHITTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 775 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
+++....... .......||+.|+|||++. .+.++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 221 la~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~~ 298 (437)
T 4aw2_A 221 SCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHKE 298 (437)
T ss_dssp TCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTHHH
T ss_pred hhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-hhHHHHhhhhccc
Confidence 9987654332 2233467999999999997 4568999999999999999999999997543 3333333332221
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDD--RPTMSEVVKD 898 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 898 (955)
. ..-|... .....++.+++.+|+..+|++ ||+++|++++
T Consensus 299 ~------~~~p~~~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 299 R------FQFPTQV----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp H------CCCCSSC----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred c------ccCCccc----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1 0111110 112367889999999888888 9999999975
No 73
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.5e-39 Score=356.46 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=206.6
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
++|+..+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999975 689999999875433 234678899999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|+++ ++.+.+... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9975 555554432 236899999999999999999999998 99999999999999999999999999987643322
Q ss_pred cceeeeeecCCCCCCHHHhhhCC-CCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh-----hhhhhcc
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQ-LTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL-----YNLYELI 858 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 858 (955)
......||+.|+|||++.+.. ++.++|||||||++|||++|..|+..+.+..+....+....... .......
T Consensus 157 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 --CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp --CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred --cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 223456899999999998765 89999999999999999999999876666655555544321100 0000000
Q ss_pred C--C--c-----CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 859 D--P--T-----IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 859 d--~--~-----l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+ + . ............+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0 0 0001112234678899999999999999999999864
No 74
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.4e-39 Score=363.90 Aligned_cols=263 Identities=25% Similarity=0.448 Sum_probs=214.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeC--------CCcEEEEEEcccCCc-chhHHHHHHHHHHHhc-cCCCcceEEEEEEeC
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP--------NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRV-HHKNLVSLLGFCFDR 696 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 696 (955)
.++|...+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367888999999999999999863 467899999986533 3346789999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCcccccCCCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE
Q 002189 697 GEQMLIYEFVPNGSLGDSLSGKNG--------------IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL 762 (955)
Q Consensus 697 ~~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll 762 (955)
+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence 999999999999999999875431 24899999999999999999999998 9999999999999
Q ss_pred cCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHH
Q 002189 763 DERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREI 841 (955)
Q Consensus 763 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~ 841 (955)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||.... ..+..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-~~~~~ 269 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELF 269 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC-HHHHH
Confidence 9999999999999987765433223334567888999999999999999999999999999999 999986433 22222
Q ss_pred HHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 842 RTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 842 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
..+. ... .+. ........+.+++.+||+.||.+||+++|+++.|+++++...
T Consensus 270 ~~~~-~~~---------~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 270 KLLK-EGH---------RMD----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHH-HTC---------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHh-cCC---------CCC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 2111 111 111 112234678999999999999999999999999999987653
No 75
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=367.43 Aligned_cols=252 Identities=21% Similarity=0.348 Sum_probs=199.9
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccC--CCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHH--KNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|...+++.||||++...... ..+.+.+|++++++++| +||+++++++.+++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 457888999999999999999888999999998754332 34678999999999986 99999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
|| .+|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 89 e~-~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 5889999987643 6899999999999999999999998 99999999999997 5789999999998775444
Q ss_pred CcceeeeeecCCCCCCHHHhhh-----------CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhh
Q 002189 784 KDHITTQVKGTMGYLDPEYYMT-----------QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELY 852 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 852 (955)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..............
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~------- 234 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------- 234 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH-------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh-------
Confidence 3333445679999999999976 6789999999999999999999999975444333222222
Q ss_pred hhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 002189 853 NLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDI 899 (955)
Q Consensus 853 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 899 (955)
++.............+.+++.+||+.||.+|||++|++++-
T Consensus 235 ------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 235 ------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 11111112222236788999999999999999999999863
No 76
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.6e-39 Score=365.52 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=207.7
Q ss_pred HHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 625 KYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 625 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
...++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34567999999999999999999864 689999999975433 234678899999999999999999999999999999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC---CceEEeecccccc
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER---LNAKVADFGLSKS 778 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~---~~~kl~DFGla~~ 778 (955)
||||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.+ +.+||+|||+++.
T Consensus 106 v~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 999999999999887543 6899999999999999999999998 9999999999999865 4599999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhcc
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELI 858 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (955)
...... .....||+.|+|||++.+..++.++|||||||++|||++|..||..... ......+.....
T Consensus 181 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-~~~~~~i~~~~~--------- 247 (362)
T 2bdw_A 181 VNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAY--------- 247 (362)
T ss_dssp CTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC---------
T ss_pred ecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCC---------
Confidence 654322 2345799999999999999999999999999999999999999975432 222222211110
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 859 DPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 859 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+ ...........++.+++.+||+.||++||+++|++++
T Consensus 248 ~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 248 D--YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp C--CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred C--CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0001112234678899999999999999999999865
No 77
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-39 Score=355.30 Aligned_cols=263 Identities=22% Similarity=0.338 Sum_probs=202.2
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
++|...+.||+|+||+||+|+..+|+.||||+++..... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468888999999999999999888999999998754322 236788999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++ +|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR- 155 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence 975 8888876542 36899999999999999999999998 99999999999999999999999999987643221
Q ss_pred ceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh-----hhhhh--hc
Q 002189 786 HITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE-----LYNLY--EL 857 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~ 857 (955)
......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... +....+...... ..... ..
T Consensus 156 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 156 -KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhcccc
Confidence 22345689999999999764 5899999999999999999999999754432 222222221100 00000 01
Q ss_pred cCCcCCC-------CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 858 IDPTIGL-------STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 858 ~d~~l~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.++.... ........++.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111110 0111234678899999999999999999999864
No 78
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.8e-40 Score=357.67 Aligned_cols=260 Identities=29% Similarity=0.444 Sum_probs=217.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +++.||||+++... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 456788899999999999999975 48899999997643 3457799999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 166 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 166 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-
Confidence 99999999998766667999999999999999999999999 99999999999999999999999999987654332
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGL 864 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (955)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .... ..... ..+
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-~~~~-~~~~~---------~~~---- 231 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYE-LLEKD---------YRM---- 231 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHH-HHHTT---------CCC----
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH-HHhcc---------CCC----
Confidence 33344567889999999999999999999999999999999 88898643321 1111 11110 111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 865 STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 865 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.........+.+++.+||+.||.+||+++|+++.|+.+.+..
T Consensus 232 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 112233467899999999999999999999999999998764
No 79
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-39 Score=360.76 Aligned_cols=265 Identities=22% Similarity=0.321 Sum_probs=201.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+..+|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467888999999999999999998899999999875432 224678899999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|++ |+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 997 57877776543 36899999999999999999999998 99999999999999999999999999987653322
Q ss_pred cceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchH--HHHHHHHHhhhhh--hh---h---
Q 002189 785 DHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYI--VREIRTVMDKKKE--LY---N--- 853 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~--~~~~~~~~~~~~~--~~---~--- 853 (955)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+......... .. .
T Consensus 175 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 175 --SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp -----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred --cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 2334568999999999986 56899999999999999999999999743322 1111111110000 00 0
Q ss_pred hhhccCCcCCCC----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 854 LYELIDPTIGLS----TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 854 ~~~~~d~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
............ .......++.+++.+||+.||.+|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000000 001123578899999999999999999999864
No 80
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.4e-40 Score=365.86 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=204.2
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCc----EEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQ----LIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
++|...+.||+|+||+||+|++. +++ +||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46778899999999999999864 444 38888876432 223356788999999999999999999885 567899
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999998754 236888999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
...........||..|+|||++.++.++.++|||||||++|||+| |+.||...... .. ........ ....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~-~~~~~~~~------~~~~- 238 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-EV-PDLLEKGE------RLAQ- 238 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-HH-HHHHHTTC------BCCC-
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-HH-HHHHHcCC------CCCC-
Confidence 544444455678889999999999999999999999999999999 99999754321 11 11111111 0001
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQ 904 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 904 (955)
.......+.+++.+||+.||.+||+++|++++|+++..
T Consensus 239 ------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 239 ------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11122456789999999999999999999999999864
No 81
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-39 Score=356.09 Aligned_cols=260 Identities=28% Similarity=0.510 Sum_probs=197.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+.. ..||||+++.... ...+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 356888999999999999999864 3699999875433 2346789999999999999999999965 5667899999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999886543 46899999999999999999999998 99999999999999999999999999986654333
Q ss_pred cceeeeeecCCCCCCHHHhh---hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 785 DHITTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||............. .... ..+.
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~--------~~~~ 246 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-GRGS--------LSPD 246 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH-HHTS--------CCCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh-cccc--------cCcc
Confidence 23334567999999999997 5678899999999999999999999997654433322222 2111 1111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
.. ......+..+.+++.+||+.||.+||+++|+++.|+++.
T Consensus 247 ~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 247 LS-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp TT-SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred hh-hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 11 112234478899999999999999999999999999874
No 82
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-39 Score=352.79 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=207.5
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeC--CeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDR--GEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 703 (955)
++|...+.||+|+||+||+|++. ++.||||+++.... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46788899999999999999985 88999999876432 3346799999999999999999999999887 7789999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.++++......+++..++.++.|+++||+|||+.+ ++++||||||+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~- 166 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP- 166 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeeccc-
Confidence 9999999999998766567999999999999999999999865 55999999999999999999999999987653322
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCC---hhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTE---KSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
...||+.|+|||.+.+..++. ++||||||+++|||++|+.||....... ........ ...+
T Consensus 167 ------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~---------~~~~ 230 (271)
T 3kmu_A 167 ------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-IGMKVALE---------GLRP 230 (271)
T ss_dssp ------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-HHHHHHHS---------CCCC
T ss_pred ------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-HHHHHHhc---------CCCC
Confidence 235899999999998765444 8999999999999999999997544322 11111111 1111
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
.. .......+.+++.+||+.||++|||++|+++.|+++.
T Consensus 231 ~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 231 TI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11 1223467899999999999999999999999999874
No 83
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=367.73 Aligned_cols=253 Identities=23% Similarity=0.348 Sum_probs=209.8
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457889999999999999999864 6899999999876555567899999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC--CCceEEeecccccccCCCC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE--RLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~--~~~~kl~DFGla~~~~~~~ 783 (955)
+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999999988754 346899999999999999999999998 999999999999974 5779999999998775432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
......||+.|+|||++.+..++.++|||||||++|||++|..||...... +....+..... ..++.
T Consensus 206 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~-------~~~~~-- 272 (387)
T 1kob_A 206 ---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDW-------EFDED-- 272 (387)
T ss_dssp ---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCC-------CCCSS--
T ss_pred ---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC-------CCCcc--
Confidence 233457999999999999999999999999999999999999999754332 22222211110 01111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......++.+++.+||+.||.+|||++|++++
T Consensus 273 --~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 --AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 112234678899999999999999999999975
No 84
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.1e-40 Score=361.80 Aligned_cols=292 Identities=28% Similarity=0.483 Sum_probs=212.3
Q ss_pred cCCHHHHHHHHHHHhhcCCC-CCCCCCCC-CCCCCCCccEEeCC----CCEeEEEecCCcCcc--ccCcCcCCCCcccEE
Q 002189 22 VTNDNDFVILKALKDDIWEN-EPPNWKNN-DPCGDNWEGIGCTN----SRVTSITLSGMGLKG--QLSGDITGLTELHTL 93 (955)
Q Consensus 22 ~~~~~~~~~L~~~k~~~~~~-~~~~w~~~-~~C~~~w~gv~C~~----~~v~~L~L~~~~l~~--~~~~~l~~l~~L~~L 93 (955)
.+.++|.+||++||+++.+. ...+|..+ |+|.+.|.||+|+. ++|+.|+|+++++++ .+|..|..+++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 36778999999999998532 24689765 44534599999985 689999999999999 899999999999999
Q ss_pred ecCC-CCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCce
Q 002189 94 DLSN-NKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNK 172 (955)
Q Consensus 94 ~Ls~-N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~ 172 (955)
+|++ |+ +.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|.|++.+|..|.++++|++|+|++|+
T Consensus 82 ~L~~~n~-l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 82 YIGGINN-LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEETT-EESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eCCCCCc-ccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 9995 75 888899999999999999999999988889889999999999999999998888888889999999988888
Q ss_pred eeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCC
Q 002189 173 LEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSL 252 (955)
Q Consensus 173 l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 252 (955)
++|.+|..++. ....|+.|+|++|++++.+|..+..++ |+.|+|++|.+
T Consensus 161 l~~~~p~~l~~------------------------------l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 161 ISGAIPDSYGS------------------------------FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp CEEECCGGGGC------------------------------CCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred ccCcCCHHHhh------------------------------hhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 88666644332 112345555555555555666666665 77777777777
Q ss_pred CCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCC
Q 002189 253 SGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADL 332 (955)
Q Consensus 253 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 332 (955)
++..|..|..+++|+.|+|++|.+++.++.+..+++|++|+|++|++ ++.+|..+
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l-------------------------~~~~p~~l 264 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI-------------------------YGTLPQGL 264 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCC-------------------------EECCCGGG
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcc-------------------------cCcCChHH
Confidence 76667777777777777777777665555444445555555555544 44555555
Q ss_pred CCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCc
Q 002189 333 FSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNR 370 (955)
Q Consensus 333 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~ 370 (955)
..+++|++|+|++|++++.+|....+.++..|++++|+
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred hcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 55555555555555555555555445555566666665
No 85
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.3e-40 Score=356.37 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=199.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeCC----CcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPN----GQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
.++|...+.||+|+||+||+|+... +..||+|+++.... ...+.+.+|+.++++++||||+++++++ .++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 3567888999999999999998642 45799999876433 3346789999999999999999999997 4567899
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999998754 346899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
... .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... +....+.... .+
T Consensus 169 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-~~~~~i~~~~----------~~ 236 (281)
T 1mp8_A 169 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGE----------RL 236 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTC----------CC
T ss_pred ccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-HHHHHHHcCC----------CC
Confidence 322 12233457788999999999999999999999999999997 89998644322 1111111110 00
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.........+.+++.+||+.||++||+++|+++.|++++++.
T Consensus 237 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 ----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111233467889999999999999999999999999998653
No 86
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=358.20 Aligned_cols=256 Identities=27% Similarity=0.473 Sum_probs=200.2
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecC
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVP 707 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 707 (955)
++|...+.||+|+||+||+|++. ++.||||+++.. ...+.|.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 45778899999999999999885 789999998753 34578999999999999999999999876 45799999999
Q ss_pred CCCcccccCCCCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc-eEEeecccccccCCCCCc
Q 002189 708 NGSLGDSLSGKNG-IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN-AKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 708 ~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~-~kl~DFGla~~~~~~~~~ 785 (955)
+|+|.++++.... ..+++..++.++.|+++||+|||+.+...|+||||||+||+++.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999976542 24788999999999999999999943333999999999999998886 799999999765422
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLS 865 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (955)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||................. ..+..
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~--- 225 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG---------TRPPL--- 225 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT---------CCCCC---
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC---------CCCCc---
Confidence 2234699999999999999999999999999999999999999974322211111111110 11111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 866 TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 866 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.......+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 226 -~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 226 -IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp -BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred -ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 1123367889999999999999999999999999987654
No 87
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=366.27 Aligned_cols=251 Identities=25% Similarity=0.306 Sum_probs=192.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467888999999999999999975 57899999997543 346788999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---CCceEEeecccccccCCC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---RLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DFGla~~~~~~ 782 (955)
+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 130 VTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999987654 6899999999999999999999998 999999999999975 889999999999876432
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||............+..... ....
T Consensus 205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~------~~~~--- 272 (349)
T 2w4o_A 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY------YFIS--- 272 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC------CCCT---
T ss_pred c---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC------ccCC---
Confidence 2 233467999999999999999999999999999999999999999765443323322222111 0011
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........++.+++.+||+.||++||+++|++++
T Consensus 273 --~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 273 --PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp --TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112234678899999999999999999999874
No 88
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=374.71 Aligned_cols=255 Identities=22% Similarity=0.323 Sum_probs=207.3
Q ss_pred HHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 625 KYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 625 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
...++|...+.||+|+||+||+|.. .+|+.||+|++...... ..+.+.+|++++++++|||||++++++.+++..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3466799999999999999999985 47899999998765432 34568899999999999999999999999999999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc---CCCceEEeecccccc
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD---ERLNAKVADFGLSKS 778 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~---~~~~~kl~DFGla~~ 778 (955)
||||+++|+|.+.+.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++ +++.+||+|||+++.
T Consensus 88 v~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999999887554 6899999999999999999999998 99999999999998 467899999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhcc
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELI 858 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (955)
...... ......||+.|+|||++.+..++.++||||+||++|||++|..||..... .+....+..... ...
T Consensus 163 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~------~~~ 233 (444)
T 3soa_A 163 VEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAY------DFP 233 (444)
T ss_dssp CCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCC------CCC
T ss_pred ecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhCCC------CCC
Confidence 654322 22346799999999999999999999999999999999999999965432 222222221111 111
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 859 DPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 859 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+ .......++.+++.+||+.||.+|||++|++++
T Consensus 234 ~~-----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 234 SP-----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TT-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cc-----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11 111234678899999999999999999999975
No 89
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=367.46 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=201.8
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 701 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|.+++..+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467899999999999999999865 68999999987532 12335678899999988 69999999999999999999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999987543 6899999999999999999999998 99999999999999999999999999986432
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+..... .
T Consensus 177 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-~~~~~~~i~~~~~-----------~ 242 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-EDDLFEAILNDEV-----------V 242 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCC-----------C
T ss_pred CC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCC-----------C
Confidence 22 23345679999999999999999999999999999999999999996543 2233333322110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCH------HHHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTM------SEVVKD 898 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 898 (955)
. +......+.+++.+||+.||.+||++ +|++++
T Consensus 243 ~----p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 243 Y----PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred C----CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 1 11123678899999999999999998 788764
No 90
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=356.68 Aligned_cols=270 Identities=23% Similarity=0.322 Sum_probs=213.3
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCC--eEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG--EQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46788899999999999999975 589999999875332 33467889999999999999999999998765 779999
Q ss_pred EecCCCCcccccCCCC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE----cCCCceEEeecccccc
Q 002189 704 EFVPNGSLGDSLSGKN-GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL----DERLNAKVADFGLSKS 778 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll----~~~~~~kl~DFGla~~ 778 (955)
||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997643 234899999999999999999999998 9999999999999 8888899999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhh--------hCCCCChhhhHHHHHHHHHHHhCCCCCcCC---chHHHHHHHHHhh
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYM--------TQQLTEKSDVYSFGVLMLELLTGRRPIERG---KYIVREIRTVMDK 847 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~ksDvwS~Gv~l~elltg~~P~~~~---~~~~~~~~~~~~~ 847 (955)
...... .....||+.|+|||++. +..++.++|||||||++|||+||+.||... ....+.+..+...
T Consensus 166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 166 LEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred cCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 754332 23456999999999987 467899999999999999999999999632 2233333333332
Q ss_pred hhhh--hhhhhc------cCCc--CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 848 KKEL--YNLYEL------IDPT--IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 848 ~~~~--~~~~~~------~d~~--l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
.... ..+... ..+. ............+.+++.+||+.||++|||++|++++..+..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 2100 000000 0001 112334566678999999999999999999999999987653
No 91
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.2e-40 Score=359.22 Aligned_cols=255 Identities=22% Similarity=0.381 Sum_probs=205.5
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CC-------cEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NG-------QLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 699 (955)
++|...+.||+|+||+||+|+.. ++ ..||+|+++.......+.+.+|++++++++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 56788899999999999999854 23 57999999776656667899999999999999999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc--------eEEe
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN--------AKVA 771 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~--------~kl~ 771 (955)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999997543 34899999999999999999999998 999999999999998887 9999
Q ss_pred ecccccccCCCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh
Q 002189 772 DFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE 850 (955)
Q Consensus 772 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 850 (955)
|||+++..... ....||+.|+|||.+.+ ..++.++||||||+++|||++|..|+.............. ..
T Consensus 164 Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~-~~-- 234 (289)
T 4fvq_A 164 DPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DR-- 234 (289)
T ss_dssp CCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TT--
T ss_pred cCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh-cc--
Confidence 99998765322 22458999999999987 7799999999999999999996665544433322221111 10
Q ss_pred hhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCC
Q 002189 851 LYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGL 908 (955)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 908 (955)
..+.+. ...++.+++.+||+.||.+|||++|++++|++++.+.+.
T Consensus 235 -----~~~~~~--------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 235 -----HQLPAP--------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp -----CCCCCC--------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred -----CCCCCC--------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 001111 123577999999999999999999999999998765543
No 92
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=363.82 Aligned_cols=253 Identities=23% Similarity=0.367 Sum_probs=199.7
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCe-----
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE----- 698 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 698 (955)
..++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4567889999999999999999975 79999999987543 3345779999999999999999999999876542
Q ss_pred ----------------------------------------------------EEEEEEecCCCCcccccCCCCC-CCCCH
Q 002189 699 ----------------------------------------------------QMLIYEFVPNGSLGDSLSGKNG-IRLDW 725 (955)
Q Consensus 699 ----------------------------------------------------~~lV~e~~~~gsL~~~l~~~~~-~~l~~ 725 (955)
.++||||+++|+|.+++..... ...++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 7999999999999999876542 34677
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc----------ceeeeeecCC
Q 002189 726 IRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD----------HITTQVKGTM 795 (955)
Q Consensus 726 ~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~ 795 (955)
..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++........ .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 788999999999999999998 999999999999999999999999999877644211 1123356999
Q ss_pred CCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHH
Q 002189 796 GYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYV 875 (955)
Q Consensus 796 ~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 875 (955)
.|+|||++.+..++.++|||||||++|||++|..|+..... ..... . ....|. .......++.
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~---~~~~~----~------~~~~~~----~~~~~~~~~~ 303 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR---IITDV----R------NLKFPL----LFTQKYPQEH 303 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH---HHHHH----H------TTCCCH----HHHHHCHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH---HHHHh----h------ccCCCc----ccccCChhHH
Confidence 99999999999999999999999999999998877532111 11100 0 000000 0122335678
Q ss_pred HHHHHhhccCCCCCCCHHHHHHH
Q 002189 876 DLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 876 ~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+++.+||+.||.+||+++|++++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999999874
No 93
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.6e-40 Score=353.06 Aligned_cols=257 Identities=28% Similarity=0.483 Sum_probs=211.7
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecC
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVP 707 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 707 (955)
++|...+.||+|+||+||+|+..+++.||+|+++.... ..+++.+|++++++++||||+++++++.+++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 46778899999999999999988889999999986543 34679999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcce
Q 002189 708 NGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDHI 787 (955)
Q Consensus 708 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 787 (955)
+++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++....... ..
T Consensus 87 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~ 161 (267)
T 3t9t_A 87 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TS 161 (267)
T ss_dssp TCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HS
T ss_pred CCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc-cc
Confidence 999999987542 36899999999999999999999998 99999999999999999999999999987643211 11
Q ss_pred eeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCC
Q 002189 788 TTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLST 866 (955)
Q Consensus 788 ~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 866 (955)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+.... .+..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~i~~~~----------~~~~---- 226 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTGF----------RLYK---- 226 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTTC----------CCCC----
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-HHHHHHHhcCC----------cCCC----
Confidence 122346778999999999999999999999999999999 8999865432 22222221110 0111
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 867 TLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 867 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
.......+.+++.+||+.||.+||+++|++++|+++.++
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 112236788999999999999999999999999998753
No 94
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.6e-40 Score=376.42 Aligned_cols=260 Identities=21% Similarity=0.308 Sum_probs=210.4
Q ss_pred HHHHHHHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEe
Q 002189 620 FEEVKKYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFD 695 (955)
Q Consensus 620 ~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 695 (955)
+.+++...++|...++||+|+||+||+|+.. +++.||+|++++.. ....+.+.+|+++++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3444455678999999999999999999975 58999999986421 1223458899999999999999999999999
Q ss_pred CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccc
Q 002189 696 RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGL 775 (955)
Q Consensus 696 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGl 775 (955)
.+..|+||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence 99999999999999999988653 5889999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCC----CCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQ----LTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL 851 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 851 (955)
++....... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... ..+....+......
T Consensus 215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~- 291 (410)
T 3v8s_A 215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNS- 291 (410)
T ss_dssp CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTHHHH-
T ss_pred eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC-hhhHHHHHHhcccc-
Confidence 987654322 2233567999999999998765 7899999999999999999999997543 33333333332210
Q ss_pred hhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 002189 852 YNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDD--RPTMSEVVKD 898 (955)
Q Consensus 852 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 898 (955)
..-|. ......++.+++.+||..+|.+ ||+++|++++
T Consensus 292 -----~~~p~-----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 292 -----LTFPD-----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -----CCCCT-----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -----ccCCC-----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00111 1112367889999999999988 9999999976
No 95
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2e-39 Score=358.82 Aligned_cols=259 Identities=22% Similarity=0.356 Sum_probs=197.6
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc---hhHHHHHHHHHHHhccCCCcceEEEEEEeCCe----
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ---GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE---- 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 698 (955)
.++|...+.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|++++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788899999999999999996 57899999999764332 23568899999999999999999999877543
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.++||||+++|+|.++++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999987543 6899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCc-ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhc
Q 002189 779 MSDSEKD-HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYEL 857 (955)
Q Consensus 779 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (955)
....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..........
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-~~~~~~~~~~-------- 236 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-VAYQHVREDP-------- 236 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHCCC--------
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHhcCCC--------
Confidence 6543221 12234569999999999999999999999999999999999999997544322 2221111110
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH-HHHHH
Q 002189 858 IDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVK-DIENI 902 (955)
Q Consensus 858 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~-~L~~~ 902 (955)
..+. ........++.+++.+||+.||.+||++.++++ .+.++
T Consensus 237 ~~~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 237 IPPS---ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CCHH---HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCcc---cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0000 001112367889999999999999997766654 45444
No 96
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=367.29 Aligned_cols=269 Identities=17% Similarity=0.225 Sum_probs=212.4
Q ss_pred cCCCccCeeeccCceEEEEEEeCC---------CcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcce----------
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPN---------GQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVS---------- 688 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~---------- 688 (955)
++|...+.||+|+||+||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 568888999999999999998753 789999998753 46889999999999999988
Q ss_pred -----EEEEEEe-CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE
Q 002189 689 -----LLGFCFD-RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL 762 (955)
Q Consensus 689 -----l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll 762 (955)
+++++.. ++..++||||+ +|+|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEE
Confidence 6778876 67889999999 999999998654457999999999999999999999998 9999999999999
Q ss_pred cCCC--ceEEeecccccccCCCCCc-----ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCc
Q 002189 763 DERL--NAKVADFGLSKSMSDSEKD-----HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGK 835 (955)
Q Consensus 763 ~~~~--~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~ 835 (955)
+.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 8999999999876532211 11123479999999999999999999999999999999999999997543
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 002189 836 YIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNP 910 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 910 (955)
.....+......... ......++.. ........+.+++.+||+.||.+||+++|+++.|++++++.+...
T Consensus 273 ~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 273 PNTEDIMKQKQKFVD--KPGPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp TCHHHHHHHHHHHHH--SCCCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred cCHHHHHHHHHhccC--Chhhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence 222222222111110 0111111110 011223678999999999999999999999999999998877544
No 97
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3e-40 Score=367.18 Aligned_cols=264 Identities=22% Similarity=0.376 Sum_probs=213.0
Q ss_pred HHHHHhcCCCccCeeeccCceEEEEEEeC------CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEE
Q 002189 622 EVKKYTNNFSDANDVGSGGYGKVYKGTLP------NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCF 694 (955)
Q Consensus 622 el~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 694 (955)
+.+...++|...+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678899999999999999999854 368899999975433 33457899999999999999999999999
Q ss_pred eCCeEEEEEEecCCCCcccccCCCC--------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC
Q 002189 695 DRGEQMLIYEFVPNGSLGDSLSGKN--------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL 766 (955)
Q Consensus 695 ~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~ 766 (955)
+.+..++||||+++|+|.++++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCC
Confidence 9999999999999999999886422 135789999999999999999999998 99999999999999999
Q ss_pred ceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHH
Q 002189 767 NAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVM 845 (955)
Q Consensus 767 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~ 845 (955)
.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||..... .+....+.
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~ 254 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-EQVLRFVM 254 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-HHHHHHHH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-HHHHHHHH
Confidence 999999999986644332222233467889999999999999999999999999999999 8888865432 22222111
Q ss_pred hhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 002189 846 DKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENIL 903 (955)
Q Consensus 846 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 903 (955)
... . + .........+.+++.+||+.||.+||+++|++++|++++
T Consensus 255 ~~~---------~-~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 255 EGG---------L-L----DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTC---------C-C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred cCC---------c-C----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 110 0 0 111223467889999999999999999999999998764
No 98
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-39 Score=352.47 Aligned_cols=262 Identities=26% Similarity=0.399 Sum_probs=211.7
Q ss_pred CCCccC-eeeccCceEEEEEEeC---CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 629 NFSDAN-DVGSGGYGKVYKGTLP---NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 629 ~f~~~~-~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
+|...+ .||+|+||+||+|++. +++.||||+++.... ...+.+.+|++++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 444555 8999999999999853 578899999986433 3456789999999999999999999999 566799999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 89 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp ECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999998643 346899999999999999999999998 9999999999999999999999999998775433
Q ss_pred Ccc-eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 784 KDH-ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 784 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +....+. ... .+.
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~i~-~~~---------~~~ 233 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFIE-QGK---------RME 233 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-HHHHHHH-TTC---------CCC
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHh-cCC---------cCC
Confidence 211 1123356889999999999999999999999999999999 99999754332 2111111 110 111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNP 910 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 910 (955)
........+.+++.+||+.||.+||+++|++++|+++..+.+...
T Consensus 234 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 234 ----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp ----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred ----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 112334788999999999999999999999999999998875543
No 99
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.6e-39 Score=368.23 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=202.8
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 701 (955)
.++|...++||+|+||+||+|+.. +++.||||++++... ...+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 356888999999999999999975 578999999875422 2234588899999887 89999999999999999999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999887543 6899999999999999999999998 99999999999999999999999999986432
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch-------HHHHHHHHHhhhhhhhhh
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY-------IVREIRTVMDKKKELYNL 854 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~-------~~~~~~~~~~~~~~~~~~ 854 (955)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.+.......
T Consensus 206 ~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~------ 277 (396)
T 4dc2_A 206 PG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK------ 277 (396)
T ss_dssp TT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC------
T ss_pred CC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc------
Confidence 22 223456899999999999999999999999999999999999999963211 111111111111
Q ss_pred hhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCH------HHHHHH
Q 002189 855 YELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTM------SEVVKD 898 (955)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 898 (955)
.... +.....++.+++.+||+.||.+||++ +|++++
T Consensus 278 ----~~~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 278 ----QIRI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp ----CCCC----CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ----ccCC----CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 1111 11233678899999999999999985 677764
No 100
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-39 Score=359.88 Aligned_cols=274 Identities=24% Similarity=0.372 Sum_probs=209.3
Q ss_pred HHHHHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhc--cCCCcceEEEEEEeC-
Q 002189 620 FEEVKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRV--HHKNLVSLLGFCFDR- 696 (955)
Q Consensus 620 ~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~- 696 (955)
........++|...+.||+|+||+||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 3444556678999999999999999999885 899999998643 234455666666655 899999999999887
Q ss_pred ---CeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcc-----CCCeeccCCCCccEEEcCCCce
Q 002189 697 ---GEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELA-----NPPIIHRDIKSSNILLDERLNA 768 (955)
Q Consensus 697 ---~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlk~~NIll~~~~~~ 768 (955)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .+.|+||||||+||+++.++.+
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 7889999999999999999654 5899999999999999999999871 1129999999999999999999
Q ss_pred EEeecccccccCCCCCcc--eeeeeecCCCCCCHHHhhhCCCCCh------hhhHHHHHHHHHHHhC----------CCC
Q 002189 769 KVADFGLSKSMSDSEKDH--ITTQVKGTMGYLDPEYYMTQQLTEK------SDVYSFGVLMLELLTG----------RRP 830 (955)
Q Consensus 769 kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k------sDvwS~Gv~l~elltg----------~~P 830 (955)
||+|||+++......... ......||+.|+|||++.+...+.+ +|||||||++|||+|| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999998765432211 1123579999999999988776665 9999999999999999 666
Q ss_pred CcCC---chHHHHHHHHHhhhhhhhhhhhccCCcCCCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 831 IERG---KYIVREIRTVMDKKKELYNLYELIDPTIGLS-TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 831 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
|... ............ .....+..... ....+..++.+++.+||+.||.+||+++|++++|+++.+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVC--------IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHT--------TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HhhhcCCCCchhhhHHHHh--------hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 6422 111111211111 11112222111 12356788999999999999999999999999999998765
Q ss_pred CC
Q 002189 907 GL 908 (955)
Q Consensus 907 ~~ 908 (955)
+.
T Consensus 334 ~~ 335 (337)
T 3mdy_A 334 DI 335 (337)
T ss_dssp TC
T ss_pred cc
Confidence 43
No 101
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=386.88 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=205.2
Q ss_pred eeeccCceEEEEEEeC---CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002189 635 DVGSGGYGKVYKGTLP---NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVPNGS 710 (955)
Q Consensus 635 ~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 710 (955)
.||+|+||+||+|.+. ++..||||+++.... ...++|.+|+++|++++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 467899999986533 345789999999999999999999999876 56899999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc-ceee
Q 002189 711 LGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD-HITT 789 (955)
Q Consensus 711 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~ 789 (955)
|.+++... ...+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++........ ....
T Consensus 422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 99998754 346899999999999999999999998 999999999999999999999999999876543221 1122
Q ss_pred eeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCH
Q 002189 790 QVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTL 868 (955)
Q Consensus 790 ~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 868 (955)
...+|+.|+|||++.++.++.++|||||||++|||+| |+.||...... +....+ .... ....+.
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-~~~~~i-~~~~-------------~~~~p~ 562 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFI-EQGK-------------RMECPP 562 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-HHHHHH-HTTC-------------CCCCCT
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHH-HcCC-------------CCCCCC
Confidence 3446789999999999999999999999999999998 99999754332 222111 1111 011122
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 002189 869 KGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNP 910 (955)
Q Consensus 869 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 910 (955)
.++.++.+++.+||+.||++||++++|++.|+.+....+...
T Consensus 563 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~ 604 (613)
T 2ozo_A 563 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 604 (613)
T ss_dssp TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcccc
Confidence 344789999999999999999999999999999987765433
No 102
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=356.54 Aligned_cols=245 Identities=26% Similarity=0.368 Sum_probs=205.5
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999865 68999999987532 123456788999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999997543 6899999999999999999999998 999999999999999999999999999876432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... ...
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~-----------~~~- 222 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-MKTYEKILNAE-----------LRF- 222 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHCC-----------CCC-
T ss_pred ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCC-----------CCC-
Confidence 2245799999999999999999999999999999999999999975433 22222222211 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRP-----TMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 898 (955)
+.....++.+++.+|++.||.+|| +++|++++
T Consensus 223 ---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 223 ---PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 112236788999999999999999 89999865
No 103
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=365.81 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=200.2
Q ss_pred ccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002189 632 DANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVPNGS 710 (955)
Q Consensus 632 ~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 710 (955)
..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 356799999999999986 4689999999987666667789999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE--cCCCceEEeecccccccCCCCCccee
Q 002189 711 LGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL--DERLNAKVADFGLSKSMSDSEKDHIT 788 (955)
Q Consensus 711 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll--~~~~~~kl~DFGla~~~~~~~~~~~~ 788 (955)
|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 173 L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~ 245 (373)
T 2x4f_A 173 LFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---L 245 (373)
T ss_dssp EHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---C
T ss_pred HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---c
Confidence 99888643 236899999999999999999999998 9999999999999 5678999999999987754332 2
Q ss_pred eeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCH
Q 002189 789 TQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTL 868 (955)
Q Consensus 789 ~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 868 (955)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.+..+...... +.+. ...
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~-------~~~~----~~~ 313 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWD-------LEDE----EFQ 313 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC-------SCSG----GGT
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCC-------CChh----hhc
Confidence 234699999999999999999999999999999999999999975443 2233333222110 0100 011
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 869 KGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 869 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
....++.+++.+||+.||.+||+++|++++
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 223678999999999999999999999974
No 104
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.1e-39 Score=363.60 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=204.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccC-----CcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQG-----SMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQM 700 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 700 (955)
.+.|...+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356888999999999999999864 6899999998632 1123567999999999999999999999999999999
Q ss_pred EEEEecCCCCcccccCCC--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc---eEEeeccc
Q 002189 701 LIYEFVPNGSLGDSLSGK--NGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN---AKVADFGL 775 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DFGl 775 (955)
+||||+++|+|.+++... .+..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998877543 2345899999999999999999999998 999999999999987655 99999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLY 855 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (955)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....+.....
T Consensus 180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~------ 249 (351)
T 3c0i_A 180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKY------ 249 (351)
T ss_dssp CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCC------
T ss_pred eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCC------
Confidence 98775432 223345799999999999999999999999999999999999999975432 11222211110
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..++.. .......+.+++.+||+.||++||++.|++++
T Consensus 250 -~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 -KMNPRQ----WSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -CCCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -CCCccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001000 01123678899999999999999999999864
No 105
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.9e-39 Score=362.54 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=213.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeCC------CcEEEEEEcccCCc-chhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPN------GQLIAIKRAQQGSM-QGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGE 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 698 (955)
.++|...+.||+|+||+||+|+... +..||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4678889999999999999998642 24899999976533 3346789999999999 89999999999999999
Q ss_pred EEEEEEecCCCCcccccCCCC------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC
Q 002189 699 QMLIYEFVPNGSLGDSLSGKN------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL 766 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~ 766 (955)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCC
Confidence 999999999999999886432 235799999999999999999999998 99999999999999999
Q ss_pred ceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHH
Q 002189 767 NAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVM 845 (955)
Q Consensus 767 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~ 845 (955)
.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||+| |..||........ .....
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~~ 280 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLV 280 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HHHHH
Confidence 999999999987654433333344567889999999999999999999999999999999 8889865432221 11222
Q ss_pred hhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 846 DKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 846 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
.... .+. ........+.+++.+||+.||.+||+++|+++.|+++.+.
T Consensus 281 ~~~~---------~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 281 KDGY---------QMA----QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHTC---------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCC---------CCC----CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1111 111 1112236788999999999999999999999999998765
No 106
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.2e-39 Score=369.87 Aligned_cols=251 Identities=21% Similarity=0.352 Sum_probs=200.0
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhcc--CCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVH--HKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~ 703 (955)
.+|...+.||+|+||+||+|...+++.||||++..... ...+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45888999999999999999988899999999875432 33467899999999996 599999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
| +.+++|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++ ++.+||+|||+++.+....
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56889999987654 6889999999999999999999998 99999999999996 5789999999998775443
Q ss_pred CcceeeeeecCCCCCCHHHhhh-----------CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhh
Q 002189 784 KDHITTQVKGTMGYLDPEYYMT-----------QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELY 852 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 852 (955)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+..+..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~------ 282 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID------ 282 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHC------
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhC------
Confidence 3223345679999999999975 46899999999999999999999999754433333322221
Q ss_pred hhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 853 NLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 853 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+......+......+.+++.+||+.||.+||+++|++++
T Consensus 283 -------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 283 -------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111111111123678899999999999999999999976
No 107
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.1e-38 Score=352.70 Aligned_cols=264 Identities=21% Similarity=0.333 Sum_probs=201.9
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688899999999999999986 578999999987532 233467889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCC--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 704 EFVPNGSLGDSLSGK--NGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 704 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 999999999988642 2346899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
.. .......|++.|+|||.+.+..++.++||||||+++|||++|+.||.................. . +.
T Consensus 189 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~-~~ 257 (310)
T 2wqm_A 189 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--------Y-PP 257 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--------S-CC
T ss_pred CC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--------C-CC
Confidence 32 1223456899999999999999999999999999999999999999754322221111111110 0 11
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCC
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGL 908 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 908 (955)
.. ......++.+++.+||+.||.+||+++|+++.|+++......
T Consensus 258 ~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 258 LP---SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp CC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred Cc---ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 11 112336788999999999999999999999999999877654
No 108
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.7e-39 Score=356.93 Aligned_cols=265 Identities=23% Similarity=0.373 Sum_probs=191.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457888999999999999999864 689999999875432 234678899999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCC----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 705 FVPNGSLGDSLSGKN----GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
|++ |+|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69988775321 235899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh----hh-hh
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE----LY-NL 854 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~----~~-~~ 854 (955)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +....+...... .. ..
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhh
Confidence 3321 2234568999999999986 46899999999999999999999999754432 222222221100 00 00
Q ss_pred hh--ccCCcCCC------------CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 855 YE--LIDPTIGL------------STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 855 ~~--~~d~~l~~------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.. ...+.... ........++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 00000000 0001123578999999999999999999999875
No 109
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=359.25 Aligned_cols=257 Identities=26% Similarity=0.455 Sum_probs=200.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCc----EEEEEEcccC-CcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQ----LIAIKRAQQG-SMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
++|...+.||+|+||+||+|++. +++ +||+|.++.. .....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 56888999999999999999864 444 4678877643 3334578999999999999999999999998754 789
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999987543 36899999999999999999999998 99999999999999999999999999987754
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
...........+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... . +........
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~-~~~~~~~~~----------- 236 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-E-ISSILEKGE----------- 236 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-G-HHHHHHTTC-----------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-H-HHHHHHcCC-----------
Confidence 443333344567888999999999999999999999999999999 99999643321 1 111111110
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQ 904 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 904 (955)
..........++.+++.+||+.||.+||+++|+++.|+++..
T Consensus 237 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 --RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred --CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 011122234678899999999999999999999999999974
No 110
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.7e-39 Score=358.51 Aligned_cols=249 Identities=27% Similarity=0.364 Sum_probs=196.4
Q ss_pred hcCCCccCeeeccCceEEEEEEe----CCCcEEEEEEcccCCc----chhHHHHHHHHHHHhccCCCcceEEEEEEeCCe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL----PNGQLIAIKRAQQGSM----QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 698 (955)
.++|...+.||+|+||+||+|+. .+|+.||||+++.... .....+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688899999999999999986 4789999999976432 233567889999999999999999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999887543 5889999999999999999999998 99999999999999999999999999976
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhcc
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELI 858 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (955)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .+
T Consensus 171 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~-------~~ 240 (327)
T 3a62_A 171 SIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-KKTIDKILKCKL-------NL 240 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCC-------CC
T ss_pred cccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCC-------CC
Confidence 43222 122345699999999999999999999999999999999999999975432 222222222110 01
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002189 859 DPTIGLSTTLKGFEKYVDLALKCVQESGDDRP-----TMSEVVKD 898 (955)
Q Consensus 859 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 898 (955)
. ......+.+++.+||+.||.+|| +++|++++
T Consensus 241 p--------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 241 P--------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp C--------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred C--------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 1 12236788999999999999999 78888875
No 111
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=391.16 Aligned_cols=257 Identities=29% Similarity=0.471 Sum_probs=210.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEec
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
.++|...+.||+|+||+||+|++.++..||||+++.... ..++|.+|+++|++++|||||++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 456788899999999999999998888999999986543 35689999999999999999999999866 6789999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcc
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDH 786 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~ 786 (955)
++|+|.++++...+..+++..++.++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++....... .
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 419 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-H
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-e
Confidence 9999999997644446899999999999999999999998 99999999999999999999999999987643211 1
Q ss_pred eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCC
Q 002189 787 ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLS 865 (955)
Q Consensus 787 ~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (955)
......++..|+|||++..+.++.++|||||||++|||+| |+.||..... .+....+. ... . ..
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-~~~~~~i~-~~~---------~----~~ 484 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVE-RGY---------R----MP 484 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-HHHHHHHH-TTC---------C----CC
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-cCC---------C----CC
Confidence 1122346788999999999999999999999999999999 8999865432 22222111 110 0 01
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 002189 866 TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQ 904 (955)
Q Consensus 866 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 904 (955)
....+...+.+|+.+||+.||++||++++|++.|+.+..
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 112344678999999999999999999999999988753
No 112
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.3e-39 Score=370.10 Aligned_cols=268 Identities=19% Similarity=0.272 Sum_probs=204.0
Q ss_pred cCCCccCeeecc--CceEEEEEEeC-CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 628 NNFSDANDVGSG--GYGKVYKGTLP-NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 628 ~~f~~~~~lG~G--~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
++|...++||+| +||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+++..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 468888999999 99999999975 789999999875432 2346688899999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||.+......
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999999987664457999999999999999999999998 999999999999999999999999998654322
Q ss_pred CC-----cceeeeeecCCCCCCHHHhhh--CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhh--
Q 002189 783 EK-----DHITTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYN-- 853 (955)
Q Consensus 783 ~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~-- 853 (955)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......................
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 11 011122468889999999987 679999999999999999999999997433221111110000000000
Q ss_pred -------------------hhhcc---CCc------CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 854 -------------------LYELI---DPT------IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 854 -------------------~~~~~---d~~------l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..+.+ .+. ............+.+|+.+||+.||.+|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00000 000 0000112233678999999999999999999999975
No 113
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.8e-39 Score=360.46 Aligned_cols=261 Identities=25% Similarity=0.283 Sum_probs=203.8
Q ss_pred HHHHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccC-----CcchhHHHHHHHHHHHhccCCCcceEEEEEEeC
Q 002189 623 VKKYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQG-----SMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR 696 (955)
Q Consensus 623 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 696 (955)
+....++|...+.||+|+||+||+|+. .+++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445677899999999999999999986 46889999998643 234457899999999999999999999999999
Q ss_pred CeEEEEEEecCCCCcccccCCCC--------------------------------------CCCCCHHHHHHHHHHHHHH
Q 002189 697 GEQMLIYEFVPNGSLGDSLSGKN--------------------------------------GIRLDWIRRLKIALGAARG 738 (955)
Q Consensus 697 ~~~~lV~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~ia~g 738 (955)
+..++||||+++|+|.+++.... ...+++..+..++.|+++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999885210 1124567788899999999
Q ss_pred HHHhhhccCCCeeccCCCCccEEEcCCC--ceEEeecccccccCCCCC--cceeeeeecCCCCCCHHHhhh--CCCCChh
Q 002189 739 LSYLHELANPPIIHRDIKSSNILLDERL--NAKVADFGLSKSMSDSEK--DHITTQVKGTMGYLDPEYYMT--QQLTEKS 812 (955)
Q Consensus 739 L~yLH~~~~~~ivHrDlk~~NIll~~~~--~~kl~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~ks 812 (955)
|+|||+.+ |+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999998 99999999999998776 899999999986543221 112344679999999999975 6789999
Q ss_pred hhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 002189 813 DVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTM 892 (955)
Q Consensus 813 DvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 892 (955)
|||||||++|||++|+.||...... +....+..... .............+.+++.+||+.||.+||++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA-DTISQVLNKKL-----------CFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC-----------CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHhccc-----------ccCCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence 9999999999999999999654432 22222222111 00001111234678899999999999999999
Q ss_pred HHHHHH
Q 002189 893 SEVVKD 898 (955)
Q Consensus 893 ~evl~~ 898 (955)
.|++++
T Consensus 326 ~~~l~h 331 (345)
T 3hko_A 326 MRALQH 331 (345)
T ss_dssp HHHHHS
T ss_pred HHHhcC
Confidence 999985
No 114
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.2e-39 Score=364.73 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=195.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +++.||||+++.... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 356888999999999999999975 789999999976433 236788999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc--eEEeecccccccCCCC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN--AKVADFGLSKSMSDSE 783 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~--~kl~DFGla~~~~~~~ 783 (955)
+++|+|.+++...+ .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999886543 6899999999999999999999998 999999999999987765 9999999997543222
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCCh-hhhHHHHHHHHHHHhCCCCCcCCch---HHHHHHHHHhhhhhhhhhhhccC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEK-SDVYSFGVLMLELLTGRRPIERGKY---IVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDvwS~Gv~l~elltg~~P~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||..... ....+......
T Consensus 173 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~------------ 237 (361)
T 3uc3_A 173 ---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV------------ 237 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTT------------
T ss_pred ---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcC------------
Confidence 2234579999999999998888766 8999999999999999999974332 12222211111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.............+.+++.+||+.||.+|||++|++++
T Consensus 238 -~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 238 -KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 11111111223678899999999999999999999986
No 115
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.1e-39 Score=363.13 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=205.3
Q ss_pred HHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeE
Q 002189 625 KYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 625 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 699 (955)
...++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578899999999999999999975 68999999987532 12345678899999987 899999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999987543 6899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 780 SDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 780 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+... .
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~-----------~ 234 (345)
T 1xjd_A 169 MLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIRMD-----------N 234 (345)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHC-----------C
T ss_pred ccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHhC-----------C
Confidence 3322 123456799999999999999999999999999999999999999965432 2222222111 1
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHH-HHHHH
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMS-EVVKD 898 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~ 898 (955)
+... .....++.+++.+||+.||.+||++. |++++
T Consensus 235 ~~~p----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 235 PFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp CCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred CCCC----cccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1111 11236788999999999999999997 77653
No 116
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.6e-39 Score=360.89 Aligned_cols=250 Identities=23% Similarity=0.309 Sum_probs=202.8
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 702 (955)
++|...+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|..++.++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888899999999999999975 689999999976432 2235678899999988 899999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999887543 6899999999999999999999998 999999999999999999999999999864322
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch-------HHHHHHHHHhhhhhhhhhh
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY-------IVREIRTVMDKKKELYNLY 855 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~-------~~~~~~~~~~~~~~~~~~~ 855 (955)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.......
T Consensus 164 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~------- 234 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK------- 234 (345)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-------
T ss_pred C--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-------
Confidence 2 223446799999999999999999999999999999999999999963211 111111111110
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCH------HHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTM------SEVVKD 898 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 898 (955)
.... +.....++.+++.+||+.||.+||++ +|++++
T Consensus 235 ---~~~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 235 ---QIRI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ---CCCC----CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ---CCCC----CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1111 11233678899999999999999995 677764
No 117
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.1e-39 Score=349.98 Aligned_cols=253 Identities=32% Similarity=0.568 Sum_probs=201.7
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchh-------HHHHHHHHHHHhccCCCcceEEEEEEeCCeE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGG-------QEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 699 (955)
++|...+.||+|+||+||+|+. .+++.||||++........ +.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5678889999999999999986 4789999999865433211 67899999999999999999999986544
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc-----eEEeecc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN-----AKVADFG 774 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~-----~kl~DFG 774 (955)
++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||||+||+++.++. +||+|||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 79999999999988876543 46899999999999999999999875 45999999999999988776 9999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCHHHhh--hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhh
Q 002189 775 LSKSMSDSEKDHITTQVKGTMGYLDPEYYM--TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELY 852 (955)
Q Consensus 775 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 852 (955)
+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.................
T Consensus 175 ~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---- 245 (287)
T 4f0f_A 175 LSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE---- 245 (287)
T ss_dssp TCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS----
T ss_pred ccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc----
Confidence 9985432 233467999999999984 45678999999999999999999999975432221111111111
Q ss_pred hhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q 002189 853 NLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIEN 901 (955)
Q Consensus 853 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 901 (955)
...+.. .......+.+++.+||+.||.+||+++|+++.|++
T Consensus 246 ----~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 246 ----GLRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp ----CCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----CCCCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111111 12234678999999999999999999999999875
No 118
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1e-38 Score=349.91 Aligned_cols=268 Identities=20% Similarity=0.317 Sum_probs=207.7
Q ss_pred HhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEE-EeCCeEEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFC-FDRGEQMLIY 703 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~ 703 (955)
..++|...+.||+|+||+||+|+. .+++.||||++..... .+.+.+|+++++.++|++++..++++ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999986 5789999998764332 24588899999999988877766666 5667789999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE---cCCCceEEeecccccccC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---DERLNAKVADFGLSKSMS 780 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DFGla~~~~ 780 (955)
||+ +++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 999999886432 36899999999999999999999998 9999999999999 789999999999998765
Q ss_pred CCCCc-----ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch--HHHHHHHHHhhhhhhhh
Q 002189 781 DSEKD-----HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY--IVREIRTVMDKKKELYN 853 (955)
Q Consensus 781 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~--~~~~~~~~~~~~~~~~~ 853 (955)
..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .............. .
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~ 237 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS--T 237 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH--S
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc--c
Confidence 44321 112345799999999999999999999999999999999999999974221 11111111111100 0
Q ss_pred hhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 002189 854 LYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNP 910 (955)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 910 (955)
......+ ..+..+.+++.+||+.||++||+++|+++.|+++.++.+...
T Consensus 238 ~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~ 286 (296)
T 4hgt_A 238 PIEVLCK--------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp CHHHHTT--------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred hhhhhhc--------cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 0000111 113678999999999999999999999999999998887543
No 119
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.2e-39 Score=348.08 Aligned_cols=255 Identities=26% Similarity=0.411 Sum_probs=207.5
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
..++|...+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3467889999999999999999875 78999999986432 234567899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 9999999999997543 6899999999999999999999998 9999999999999999999999999998664332
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
.........||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.................. ...
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~--- 229 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------YLN--- 229 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-------TST---
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-------ccC---
Confidence 2222334578999999999987665 77999999999999999999999754432222221111110 000
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........+.+++.+||+.||.+|||++|++++
T Consensus 230 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 ---PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 111233678899999999999999999999863
No 120
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.4e-38 Score=345.85 Aligned_cols=252 Identities=22% Similarity=0.297 Sum_probs=206.8
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
..++|...+.||+|+||+||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3457889999999999999999865 578999999987655666789999999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE---cCCCceEEeecccccccCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---DERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DFGla~~~~~ 781 (955)
|+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 87 LCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred ccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999999886543 5899999999999999999999998 9999999999999 8889999999999987654
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... +....+..... ..+.
T Consensus 162 ~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~--------~~~~ 228 (277)
T 3f3z_A 162 GKM---MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-EVMLKIREGTF--------TFPE 228 (277)
T ss_dssp TSC---BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC--------CCCH
T ss_pred ccc---hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCC--------CCCc
Confidence 332 234569999999999865 4899999999999999999999999754432 22222211110 0000
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.........+.+++.+||+.||.+||++.|++++
T Consensus 229 ---~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 229 ---KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000123678899999999999999999999975
No 121
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2e-38 Score=347.83 Aligned_cols=266 Identities=20% Similarity=0.325 Sum_probs=210.0
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEE-EeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFC-FDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+. .+|+.||||++..... .+++.+|+++++.++|++++..+.++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 45788899999999999999996 5789999999875433 35689999999999988877666665 55677899999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE---cCCCceEEeecccccccCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---DERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DFGla~~~~~ 781 (955)
|+ +++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 999999886332 36899999999999999999999998 9999999999999 5889999999999987654
Q ss_pred CCCcc-----eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch--HHHHHHHHHhhhhhhhhh
Q 002189 782 SEKDH-----ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY--IVREIRTVMDKKKELYNL 854 (955)
Q Consensus 782 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~--~~~~~~~~~~~~~~~~~~ 854 (955)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .......+...... ..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~ 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS--TP 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH--SC
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC--Cc
Confidence 43211 12345799999999999999999999999999999999999999974221 11111111111100 00
Q ss_pred hhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCC
Q 002189 855 YELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLN 909 (955)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 909 (955)
...+.+ ..+.++.+++.+||+.||++||+++|+++.|+++.+..+..
T Consensus 239 ~~~~~~--------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 239 IEVLCK--------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp HHHHTT--------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHh--------hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 000111 12367889999999999999999999999999999887653
No 122
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.1e-39 Score=349.54 Aligned_cols=250 Identities=27% Similarity=0.460 Sum_probs=207.2
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEe---------
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFD--------- 695 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 695 (955)
...+|...+.||+|+||.||+|+.. +|+.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567889999999999999999975 78999999987543 357789999999999999999998865
Q ss_pred -------CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCce
Q 002189 696 -------RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNA 768 (955)
Q Consensus 696 -------~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 768 (955)
....++||||+++|+|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence 445799999999999999997654457999999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhh
Q 002189 769 KVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKK 848 (955)
Q Consensus 769 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 848 (955)
||+|||+++....... .....||+.|+|||.+.+..++.++||||||+++|||++|..|+...... ....
T Consensus 162 kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-------~~~~ 231 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF-------FTDL 231 (284)
T ss_dssp EECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH-------HHHH
T ss_pred EECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH-------HHHh
Confidence 9999999987754332 23356999999999999999999999999999999999999887432111 1100
Q ss_pred hhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 849 KELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 849 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
. ...+.+ .....+.+++.+||+.||.+||+++|++++|+.+.+.
T Consensus 232 ~-----~~~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 232 R-----DGIISD--------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp H-----TTCCCT--------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred h-----cccccc--------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 0 001111 1225678999999999999999999999999988543
No 123
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=351.22 Aligned_cols=265 Identities=24% Similarity=0.308 Sum_probs=203.6
Q ss_pred HhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc-----chhHHHHHHHHHHHhcc---CCCcceEEEEEEeC
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM-----QGGQEFKMEIELLSRVH---HKNLVSLLGFCFDR 696 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 696 (955)
..++|...+.||+|+||+||+|+. .+|+.||||+++.... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999995 5789999999864221 12346778888887775 99999999999876
Q ss_pred C-----eEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEe
Q 002189 697 G-----EQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVA 771 (955)
Q Consensus 697 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 771 (955)
. ..++||||++ |+|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence 5 4799999996 69999998766556999999999999999999999998 9999999999999999999999
Q ss_pred ecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh
Q 002189 772 DFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL 851 (955)
Q Consensus 772 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 851 (955)
|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.......
T Consensus 163 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-HHHHHHHHHHHCCC
T ss_pred eCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCC
Confidence 9999987653322 2345789999999999999999999999999999999999999965433 23333332211100
Q ss_pred --hhhhh-------ccCCcCCC---CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 852 --YNLYE-------LIDPTIGL---STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 852 --~~~~~-------~~d~~l~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..+.. .+.+.... .........+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000 00000000 0001233678899999999999999999999864
No 124
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=358.27 Aligned_cols=246 Identities=22% Similarity=0.269 Sum_probs=195.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc--hhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 702 (955)
.++|+..++||+|+||+||+|+.. +|+.||||++...... ....+..|+..+.++ +||||++++++|.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357899999999999999999975 7999999998654332 234455666666665 899999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+ +++|.+++...+ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 779988876543 46999999999999999999999988 999999999999999999999999999876533
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. ......||++|+|||++.+ .++.++|||||||++|||++|..|+........ ... . ...+..
T Consensus 211 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~----~~~-~--------~~~~~~ 273 (311)
T 3p1a_A 211 G---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ----LRQ-G--------YLPPEF 273 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH----HTT-T--------CCCHHH
T ss_pred C---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----Hhc-c--------CCCccc
Confidence 2 2334569999999998875 799999999999999999999877654322111 110 0 011111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
......++.+++.+||+.||++|||++|++++
T Consensus 274 ----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 274 ----TAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 11123678999999999999999999999864
No 125
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.9e-39 Score=361.74 Aligned_cols=263 Identities=25% Similarity=0.410 Sum_probs=207.6
Q ss_pred hcCCCccCeeeccCceEEEEEEe------CCCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL------PNGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 699 (955)
.++|...+.||+|+||+||+|++ .+++.||||++.... .....++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35788899999999999999984 247789999997543 33456789999999999999999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCC-----CCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---CCceEEe
Q 002189 700 MLIYEFVPNGSLGDSLSGKNG-----IRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---RLNAKVA 771 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~ 771 (955)
++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999875431 35899999999999999999999998 999999999999984 4569999
Q ss_pred ecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhh
Q 002189 772 DFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKE 850 (955)
Q Consensus 772 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 850 (955)
|||+++...............||+.|+|||.+.+..++.++||||||+++|||+| |..||..... .+....+....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~-- 262 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGG-- 262 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTC--
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-HHHHHHHhcCC--
Confidence 9999986544332222334567889999999999999999999999999999998 8899865432 22222111110
Q ss_pred hhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 851 LYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
.+. ........+.+++.+||+.||.+||+++|++++|+.+.+...
T Consensus 263 --------~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 263 --------RMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp --------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred --------CCC----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 011 112234678899999999999999999999999999876543
No 126
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-39 Score=366.02 Aligned_cols=260 Identities=30% Similarity=0.480 Sum_probs=196.8
Q ss_pred CCCccCeeeccCceEEEEEEeC--CC--cEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEe-CCeEEEE
Q 002189 629 NFSDANDVGSGGYGKVYKGTLP--NG--QLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFD-RGEQMLI 702 (955)
Q Consensus 629 ~f~~~~~lG~G~fg~Vy~~~~~--~g--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV 702 (955)
.|...+.||+|+||+||+|++. ++ ..||||.++... ....++|.+|+.++++++||||++++++|.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3556688999999999999863 22 468999987543 3345779999999999999999999999765 4578999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.++++... ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999997543 36889999999999999999999998 999999999999999999999999999876443
Q ss_pred CCc--ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 783 EKD--HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 783 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
... .......+|+.|+|||++.+..++.++|||||||++|||+| |.+||...... +........ . ....
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-~~~~~~~~~-~------~~~~ 317 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQG-R------RLLQ 317 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-CHHHHHHTT-C------CCCC
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-HHHHHHHcC-C------CCCC
Confidence 221 11233567889999999999999999999999999999999 66666533221 111111111 0 0011
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
+......+.+++.+||+.||++||+++|+++.|++++....
T Consensus 318 -------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 318 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp -------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred -------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 12234678999999999999999999999999999987653
No 127
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.1e-39 Score=355.82 Aligned_cols=263 Identities=25% Similarity=0.382 Sum_probs=199.4
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC----CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCe-
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP----NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE- 698 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 698 (955)
..++|...+.||+|+||+||+|+.. .++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3467788899999999999999853 345899999875433 234678999999999999999999999987653
Q ss_pred ----EEEEEEecCCCCcccccCC----CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEE
Q 002189 699 ----QMLIYEFVPNGSLGDSLSG----KNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKV 770 (955)
Q Consensus 699 ----~~lV~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 770 (955)
.++||||+++|+|.+++.. .....+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEE
Confidence 4999999999999998732 22346999999999999999999999988 999999999999999999999
Q ss_pred eecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhh
Q 002189 771 ADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 771 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ..........
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~- 266 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-EMYDYLLHGH- 266 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTC-
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-HHHHHHHcCC-
Confidence 99999987654433233334567889999999999999999999999999999999 88888644322 1111111110
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.+. ........+.+++.+||+.||.+||++++++++|++++++.
T Consensus 267 ---------~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 267 ---------RLK----QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp ---------CCC----CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---------CCC----CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 11223467899999999999999999999999999998764
No 128
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=360.72 Aligned_cols=271 Identities=26% Similarity=0.470 Sum_probs=211.5
Q ss_pred cCCCccCeeeccCceEEEEEEe-----CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCC--eEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-----PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG--EQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~ 700 (955)
++|...+.||+|+||+||+|++ .+|+.||||+++.......+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577889999999999999984 368999999998766666678999999999999999999999987654 679
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 121 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999987543 36899999999999999999999988 9999999999999999999999999998775
Q ss_pred CCCCcc-eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh----hhhhhh
Q 002189 781 DSEKDH-ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK----ELYNLY 855 (955)
Q Consensus 781 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~----~~~~~~ 855 (955)
...... ......++..|+|||.+.+..++.++||||||+++|||+||..|+........ . ...... ....+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM--R-MIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH--H-HHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH--H-hhccccchhhhHHHHH
Confidence 433211 11224567789999999999999999999999999999999999863211110 0 000000 000011
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
+.+..............++.+++.+||+.||++||+++|+++.|+++.++
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111112233457889999999999999999999999999998765
No 129
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.1e-39 Score=351.98 Aligned_cols=261 Identities=29% Similarity=0.443 Sum_probs=204.6
Q ss_pred cCCCccCeeeccCceEEEEEEeCC----CcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEe-CCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPN----GQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFD-RGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~l 701 (955)
.+|...+.||+|+||+||+|+..+ +..||||+++.... ...+.+.+|++++++++||||+++++++.+ ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356778899999999999998642 23689999876433 334678999999999999999999998754 557899
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.++++.. ...+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999753 346899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCC--cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 782 SEK--DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 782 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
... ........||+.|+|||.+.+..++.++||||||+++|||++|..|+..+....+.......... ...
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 253 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-------LLQ 253 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC-------CCC
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC-------CCC
Confidence 321 11223456788999999999999999999999999999999955444333222222222211110 011
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.......+.+++.+||+.||.+||+++|+++.|++++...
T Consensus 254 -------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 254 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp -------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred -------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1122367899999999999999999999999999998764
No 130
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-38 Score=358.60 Aligned_cols=245 Identities=22% Similarity=0.309 Sum_probs=205.8
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56888899999999999999975 68999999986532 123457889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999987543 5899999999999999999999998 999999999999999999999999999876432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... ...
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~-----------~~~- 257 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-IQIYEKIVSGK-----------VRF- 257 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCC-----------CCC-
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-HHHHHHHHcCC-----------CCC-
Confidence 2235799999999999999999999999999999999999999975432 22222222211 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPT-----MSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 898 (955)
+......+.+++.+||+.||.+||+ ++|++++
T Consensus 258 ---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 258 ---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1123367889999999999999998 8898865
No 131
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-39 Score=350.61 Aligned_cols=260 Identities=26% Similarity=0.351 Sum_probs=207.4
Q ss_pred CCccCeeeccCceEEEEEEeC-C---CcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE-EEEE
Q 002189 630 FSDANDVGSGGYGKVYKGTLP-N---GQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ-MLIY 703 (955)
Q Consensus 630 f~~~~~lG~G~fg~Vy~~~~~-~---g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lV~ 703 (955)
|...++||+|+||+||+|++. + +..||+|+++.... ...+.+.+|++++++++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 445688999999999999853 2 23799999876433 3346789999999999999999999999876655 9999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 103 e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 103 PYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred ecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999998763 346899999999999999999999998 9999999999999999999999999998654322
Q ss_pred C--cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 784 K--DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 784 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
. ........+|+.|+|||.+.+..++.++||||||+++|||++|..|+.......+......... .+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~----------~~- 247 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR----------RL- 247 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC----------CC-
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC----------CC-
Confidence 1 1122234678899999999999999999999999999999997666554433322222111111 00
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
.........+.+++.+||+.||.+|||++|+++.|++++++..
T Consensus 248 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 248 ---PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred ---CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1112233678999999999999999999999999999988753
No 132
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.1e-38 Score=352.34 Aligned_cols=252 Identities=25% Similarity=0.352 Sum_probs=206.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc------hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ------GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 699 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+++.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456888999999999999999865 6899999998754322 246799999999999999999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC----ceEEeeccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL----NAKVADFGL 775 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DFGl 775 (955)
++||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 99999999999999997543 6899999999999999999999998 99999999999999888 799999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLY 855 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (955)
++....... .....||+.|+|||.+.+..++.++||||||+++|||++|..||..... .+....+.....
T Consensus 166 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~------ 235 (321)
T 2a2a_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITSVSY------ 235 (321)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTTCC------
T ss_pred ceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhccc------
Confidence 987654322 2345699999999999999999999999999999999999999965432 222222211100
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..++.. .......+.+++.+||+.||++|||++|++++
T Consensus 236 -~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 -DFDEEF----FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -CCCHHH----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -ccChhh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001000 01123578899999999999999999999974
No 133
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-39 Score=357.73 Aligned_cols=260 Identities=27% Similarity=0.470 Sum_probs=203.5
Q ss_pred cCCCccCeeeccCceEEEEEEeCC-----CcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPN-----GQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~-----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
.+|...+.||+|+||+||+|+... +..||||+++.... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 345667899999999999998642 24699999976433 234578999999999999999999999999999999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 99999999999998753 246899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCc-ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 782 SEKD-HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 782 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
.... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..... .+....+... . .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-~~~~~~~~~~-~---------~ 268 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKAINDG-F---------R 268 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTT-C---------C
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-HHHHHHHHCC-C---------c
Confidence 3221 11223346788999999999999999999999999999999 9999965432 1222111111 0 0
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
+ .........+.+++.+||+.||.+||+++|+++.|+++++..
T Consensus 269 ~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 269 L----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp C----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred C----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 111233467899999999999999999999999999998654
No 134
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.8e-39 Score=350.49 Aligned_cols=254 Identities=27% Similarity=0.432 Sum_probs=201.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeC-CeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR-GEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 356888899999999999999874 8899999997543 446799999999999999999999997654 478999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|+|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 99999999987554334789999999999999999999998 9999999999999999999999999998654321
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGL 864 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (955)
....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... +....+. . ...+
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~~-~---------~~~~---- 233 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVE-K---------GYKM---- 233 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-GHHHHHT-T---------TCCC----
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHh-c---------CCCC----
Confidence 22357899999999999999999999999999999998 99998643221 1111111 0 0111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 865 STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 865 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.........+.+++.+||+.||.+||+++|+++.|+++....
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 112233467899999999999999999999999999987653
No 135
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=370.34 Aligned_cols=264 Identities=22% Similarity=0.266 Sum_probs=210.5
Q ss_pred cCHHHHHHHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEE
Q 002189 618 FSFEEVKKYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFC 693 (955)
Q Consensus 618 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~ 693 (955)
+.+++.+...++|...++||+|+||+||+|+.. +|+.||||++++... ...+.+.+|.+++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 344555556789999999999999999999974 789999999875321 1224588999999999999999999999
Q ss_pred EeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeec
Q 002189 694 FDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADF 773 (955)
Q Consensus 694 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 773 (955)
.+.+..|+||||+++|+|.+++...+ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999997532 36899999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCHHHhhh-------CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHh
Q 002189 774 GLSKSMSDSEKDHITTQVKGTMGYLDPEYYMT-------QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMD 846 (955)
Q Consensus 774 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 846 (955)
|+++....... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .+....+..
T Consensus 207 Gla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~ 284 (412)
T 2vd5_A 207 GSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-AETYGKIVH 284 (412)
T ss_dssp TTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHT
T ss_pred hhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-HHHHHHHHh
Confidence 99987654332 22234679999999999983 5689999999999999999999999975433 233333332
Q ss_pred hhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCC---CCHHHHHHH
Q 002189 847 KKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDR---PTMSEVVKD 898 (955)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 898 (955)
.... ...|.. ......++.+++.+||. +|.+| |+++|++++
T Consensus 285 ~~~~------~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 285 YKEH------LSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHH------CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cccC------cCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 2110 001111 11223678899999999 99998 689999875
No 136
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.2e-39 Score=349.36 Aligned_cols=258 Identities=24% Similarity=0.402 Sum_probs=204.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeCC----CcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPN----GQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
.++|...+.||+|+||+||+|++.+ +..||||+++.... ...+.+.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3567888999999999999998542 34699999886533 345679999999999999999999998764 56789
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++++|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999998653 235899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
... .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... ..... .... .+
T Consensus 166 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~-~~~~~-~~~~---------~~ 233 (281)
T 3cc6_A 166 EDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-VIGVL-EKGD---------RL 233 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG-HHHHH-HHTC---------CC
T ss_pred ccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH-HHHHH-hcCC---------CC
Confidence 322 12233457888999999999999999999999999999998 999996433221 11111 1110 00
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
. ........+.+++.+||+.||++||+++|+++.|+++.+.
T Consensus 234 ~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 234 P----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0 1112336788999999999999999999999999998764
No 137
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-38 Score=355.34 Aligned_cols=259 Identities=29% Similarity=0.468 Sum_probs=207.6
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcE--EEEEEcccCC-cchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQL--IAIKRAQQGS-MQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 702 (955)
++|...+.||+|+||+||+|+.. +|.. ||||+++... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888899999999999999864 5664 4999887532 23346789999999999 899999999999999999999
Q ss_pred EEecCCCCcccccCCCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCce
Q 002189 703 YEFVPNGSLGDSLSGKN--------------GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNA 768 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 768 (955)
|||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999987543 246899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhh
Q 002189 769 KVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDK 847 (955)
Q Consensus 769 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~ 847 (955)
||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... +....+. .
T Consensus 182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~-~ 256 (327)
T 1fvr_A 182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLP-Q 256 (327)
T ss_dssp EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGG-G
T ss_pred EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHHHhh-c
Confidence 99999999743221 11223457889999999999999999999999999999998 99999654321 1111111 1
Q ss_pred hhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 848 KKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 848 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
...+ .........+.+++.+||+.||.+||+++|+++.|+++++...
T Consensus 257 ---------~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 257 ---------GYRL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp ---------TCCC----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred ---------CCCC----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0111 1122334678999999999999999999999999999987653
No 138
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=364.76 Aligned_cols=247 Identities=24% Similarity=0.333 Sum_probs=202.5
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+++++.++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888999999999999999865 68899999986432 223467889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999987643 6899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CcceeeeeecCCCCCCHHHhhh---CCCCChhhhHHHHHHHHHHHhCCCCCcCCc--hHHHHHHHHHhhhhhhhhhhhcc
Q 002189 784 KDHITTQVKGTMGYLDPEYYMT---QQLTEKSDVYSFGVLMLELLTGRRPIERGK--YIVREIRTVMDKKKELYNLYELI 858 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDvwS~Gv~l~elltg~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 858 (955)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ............
T Consensus 170 ---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~----------- 235 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT----------- 235 (384)
T ss_dssp ---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC-----------
T ss_pred ---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc-----------
Confidence 2344679999999999974 458999999999999999999999997432 221211111110
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCC-HHHHHH
Q 002189 859 DPTIGLSTTLKGFEKYVDLALKCVQESGDDRPT-MSEVVK 897 (955)
Q Consensus 859 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 897 (955)
... .+......+.+++.+||+.||.+||+ ++++.+
T Consensus 236 ~~~----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 VVT----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCC----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ccC----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 001 11123367899999999999999998 777765
No 139
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=359.14 Aligned_cols=264 Identities=18% Similarity=0.215 Sum_probs=199.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC----CCcEEEEEEcccCCcch-----------hHHHHHHHHHHHhccCCCcceEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP----NGQLIAIKRAQQGSMQG-----------GQEFKMEIELLSRVHHKNLVSLLGF 692 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~l~~~ 692 (955)
++|...+.||+|+||+||+|+.. ++..||||++....... .+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56788899999999999999975 57889999987643221 1346678889999999999999999
Q ss_pred EEe----CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC--
Q 002189 693 CFD----RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL-- 766 (955)
Q Consensus 693 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~-- 766 (955)
+.. ....++||||+ +++|.+++...+ .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCC
Confidence 988 67889999999 999999998654 7899999999999999999999998 99999999999999887
Q ss_pred ceEEeecccccccCCCCCc-----ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHH
Q 002189 767 NAKVADFGLSKSMSDSEKD-----HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREI 841 (955)
Q Consensus 767 ~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~ 841 (955)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876432211 11134579999999999999999999999999999999999999996422211111
Q ss_pred HHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q 002189 842 RTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENI 902 (955)
Q Consensus 842 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 902 (955)
......... .+...+..... ....+.++.+++.+||+.||++||++++|++.|+++
T Consensus 271 ~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 271 QTAKTNLLD--ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHH--TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHhhcc--cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 111111100 00000000000 012336789999999999999999999999988765
No 140
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.6e-39 Score=364.51 Aligned_cols=273 Identities=22% Similarity=0.319 Sum_probs=211.9
Q ss_pred CcccCHHHHHHHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-----CCCcce
Q 002189 615 ARCFSFEEVKKYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-----HKNLVS 688 (955)
Q Consensus 615 ~~~~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~ 688 (955)
...+++.+.....++|...++||+|+||+||+|+. .+++.||||+++.. ....+.+..|+++++.++ ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34455555556678999999999999999999986 47899999998743 233466788999999996 999999
Q ss_pred EEEEEEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC----
Q 002189 689 LLGFCFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---- 764 (955)
Q Consensus 689 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---- 764 (955)
+++++...+..++||||+ +++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccccc
Confidence 999999999999999999 999999998665556999999999999999999999998 999999999999975
Q ss_pred ---------------------CCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHH
Q 002189 765 ---------------------RLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLE 823 (955)
Q Consensus 765 ---------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~e 823 (955)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 7899999999998654322 23568999999999999999999999999999999
Q ss_pred HHhCCCCCcCCchHHHHHHHHHhhhhhhh----------hhhhccCC-c----CCC-CCCHH---------------HHH
Q 002189 824 LLTGRRPIERGKYIVREIRTVMDKKKELY----------NLYELIDP-T----IGL-STTLK---------------GFE 872 (955)
Q Consensus 824 lltg~~P~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~-~----l~~-~~~~~---------------~~~ 872 (955)
|++|+.||...... +....+........ .....++. . ... ..... ...
T Consensus 252 ll~g~~pf~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (360)
T 3llt_A 252 LYTGSLLFRTHEHM-EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHE 330 (360)
T ss_dssp HHHSSCSCCCSSHH-HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCH
T ss_pred HHHCCCCCCCCcHH-HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHH
Confidence 99999999754332 22221111000000 00000000 0 000 00000 015
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 873 KYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 873 ~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+.+++.+||+.||.+|||++|++++
T Consensus 331 ~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 331 LFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 67899999999999999999999864
No 141
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=9e-39 Score=350.05 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=206.4
Q ss_pred cCCCccC-eeeccCceEEEEEEe---CCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 628 NNFSDAN-DVGSGGYGKVYKGTL---PNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 628 ~~f~~~~-~lG~G~fg~Vy~~~~---~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
++|...+ .||+|+||+||+|.+ .+++.||||+++.... ...+++.+|+++++.++||||+++++++ +.+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4566666 899999999999964 2468999999875432 2346799999999999999999999999 6678899
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 95 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999997643 5899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCcc-eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 782 SEKDH-ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 782 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
..... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... +. ........ .
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~-~~~~~~~~---------~ 238 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-EV-TAMLEKGE---------R 238 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HH-HHHHHTTC---------C
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HH-HHHHHcCC---------C
Confidence 33211 1222346788999999999899999999999999999999 99999754331 11 11111111 1
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
+. ........+.+++.+||+.||.+||+++|+++.|++++.+.
T Consensus 239 ~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 239 MG----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp CC----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11 11233467899999999999999999999999999998764
No 142
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-39 Score=361.18 Aligned_cols=246 Identities=25% Similarity=0.353 Sum_probs=202.3
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999996 578999999986431 122357899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+ +|+|.+++...+ .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 89 E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred ECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 999 789988886543 6899999999999999999999999 9999999999999999999999999998765433
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+...+...
T Consensus 163 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---------------~~~~~i~~~- 223 (336)
T 3h4j_B 163 F---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP---------------NLFKKVNSC- 223 (336)
T ss_dssp T---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST---------------TCBCCCCSS-
T ss_pred c---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH---------------HHHHHHHcC-
Confidence 2 234569999999999987776 68999999999999999999999643211 011111110
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
....+......+.+++.+||+.||.+|||++|++++
T Consensus 224 ~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 224 VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 011122234678899999999999999999999986
No 143
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.9e-38 Score=344.42 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=182.2
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+. .+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4788999999999999999985 4789999999875432 22457889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+ +++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 778888776543 6899999999999999999999998 9999999999999999999999999998664432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... .....+..... ..
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~-----------~~ 231 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVY-----------TL 231 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC-----------CC
T ss_pred ---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC-----------CC
Confidence 2234569999999999987765 78999999999999999999999754322 22222111110 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......+.+++.+||+.||.+|||++|++++
T Consensus 232 ----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 232 ----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 11123678899999999999999999999875
No 144
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.3e-39 Score=361.74 Aligned_cols=246 Identities=28% Similarity=0.459 Sum_probs=201.4
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc---hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ---GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
+.|...+.||+|+||+||+|+. .+|+.||||++...... ..+++.+|++++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4478889999999999999985 57899999998754332 2356889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||++ |+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 9996 6887777532 236899999999999999999999998 999999999999999999999999999876432
Q ss_pred CcceeeeeecCCCCCCHHHhh---hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
....||+.|+|||++. .+.++.++|||||||++|||++|+.||...... ..+....... .+
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~~~~~~~~~~----------~~ 271 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNE----------SP 271 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSC----------CC
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcC----------CC
Confidence 2356999999999985 567899999999999999999999999755432 2222222111 11
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
... .......+.+++.+||+.||.+|||++|++++
T Consensus 272 ~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 272 ALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111 11223678899999999999999999999975
No 145
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.2e-38 Score=357.22 Aligned_cols=273 Identities=23% Similarity=0.380 Sum_probs=215.9
Q ss_pred cCHHHHHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHh--ccCCCcceEEEEEEe
Q 002189 618 FSFEEVKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSR--VHHKNLVSLLGFCFD 695 (955)
Q Consensus 618 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~ 695 (955)
.++.......++|...+.||+|+||+||+|+. +|+.||||+++.. ..+.+.+|++++.. ++||||+++++++..
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 34444556678899999999999999999998 5899999998642 34668889999987 689999999999988
Q ss_pred CC----eEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hccCCCeeccCCCCccEEEc
Q 002189 696 RG----EQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLH--------ELANPPIIHRDIKSSNILLD 763 (955)
Q Consensus 696 ~~----~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlk~~NIll~ 763 (955)
.+ ..++||||+++|+|.+++... .+++..++.++.|+++||+||| +.+ |+||||||+||+++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVK 181 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEEC
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEEC
Confidence 76 789999999999999999653 5899999999999999999999 667 99999999999999
Q ss_pred CCCceEEeecccccccCCCCCcc--eeeeeecCCCCCCHHHhhhCC------CCChhhhHHHHHHHHHHHhC--------
Q 002189 764 ERLNAKVADFGLSKSMSDSEKDH--ITTQVKGTMGYLDPEYYMTQQ------LTEKSDVYSFGVLMLELLTG-------- 827 (955)
Q Consensus 764 ~~~~~kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~~~ksDvwS~Gv~l~elltg-------- 827 (955)
.++.+||+|||+++......... ......||+.|+|||.+.+.. ++.++|||||||++|||+||
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 99999999999998765433211 123457999999999998652 33689999999999999999
Q ss_pred --CCCCcCCch---HHHHHHHHHhhhhhhhhhhhccCCcCCCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q 002189 828 --RRPIERGKY---IVREIRTVMDKKKELYNLYELIDPTIGLS-TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIEN 901 (955)
Q Consensus 828 --~~P~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 901 (955)
..||..... ....+...... ....+.+... ........+.+++.+||+.||++||+++|++++|++
T Consensus 262 ~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 262 DYQLPYYDLVPSDPSVEEMRKVVCE--------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHTT--------SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred ccccCccccCcCcccHHHHHHHHHH--------HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 678753211 11211111111 1122222211 233566789999999999999999999999999999
Q ss_pred HHHHcCC
Q 002189 902 ILQQAGL 908 (955)
Q Consensus 902 ~~~~~~~ 908 (955)
+.++.+.
T Consensus 334 i~~~~~~ 340 (342)
T 1b6c_B 334 LSQQEGI 340 (342)
T ss_dssp HHHTTC-
T ss_pred HHHHhcC
Confidence 9887653
No 146
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.3e-39 Score=385.97 Aligned_cols=251 Identities=26% Similarity=0.411 Sum_probs=201.1
Q ss_pred CeeeccCceEEEEEEeC---CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecCC
Q 002189 634 NDVGSGGYGKVYKGTLP---NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVPN 708 (955)
Q Consensus 634 ~~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 708 (955)
+.||+|+||+||+|.+. .++.||||+++.... ...+++.+|+++|++++|||||+++++|. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999653 467899999986433 23578999999999999999999999986 4568999999999
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC-cce
Q 002189 709 GSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK-DHI 787 (955)
Q Consensus 709 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~-~~~ 787 (955)
|+|.++++... .+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.+..... ...
T Consensus 454 g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999996543 6899999999999999999999998 99999999999999999999999999987754332 122
Q ss_pred eeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCC
Q 002189 788 TTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLST 866 (955)
Q Consensus 788 ~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 866 (955)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +.. ..+.... . ...
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-~~~-~~i~~~~---------~----~~~ 593 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-EVT-AMLEKGE---------R----MGC 593 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHH-HHHHTTC---------C----CCC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHH-HHHHcCC---------C----CCC
Confidence 233457889999999999999999999999999999998 99999654332 111 1111111 0 111
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 867 TLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 867 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
...+..++.+++.+||+.||++||++++|++.|+++...
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 223447889999999999999999999999999998754
No 147
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=350.98 Aligned_cols=264 Identities=21% Similarity=0.302 Sum_probs=200.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 357888999999999999999975 5899999998654332 2456889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp ECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 9999999988876543 5899999999999999999999998 9999999999999999999999999998765332
Q ss_pred CcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh------------
Q 002189 784 KDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE------------ 850 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------------ 850 (955)
. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ....+......
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 157 D--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHTC
T ss_pred c--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhcccccccccccccc
Confidence 2 2234578999999999986 678999999999999999999999997544322 22111111000
Q ss_pred -hhhhhhccCCcCCCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 851 -LYNLYELIDPTIGLS---TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 851 -~~~~~~~~d~~l~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........++..... ........+.+++.+||+.||.+|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000111110000 001233568899999999999999999999975
No 148
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1e-38 Score=358.68 Aligned_cols=249 Identities=23% Similarity=0.291 Sum_probs=205.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 701 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467889999999999999999975 47899999987532 12345678899999988 79999999999999999999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999987543 5899999999999999999999998 99999999999999999999999999986432
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.... ..
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-~~~~~~~i~~~~-----------~~ 239 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSIMEHN-----------VA 239 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCC-----------CC
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-HHHHHHHHHhCC-----------CC
Confidence 22 22344679999999999999999999999999999999999999996543 223222222211 11
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPT-----MSEVVKD 898 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 898 (955)
. +.....++.+++.+||+.||.+||+ ++|++++
T Consensus 240 ~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 Y----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp C----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred C----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1 1123367889999999999999995 5888765
No 149
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5e-39 Score=374.06 Aligned_cols=249 Identities=22% Similarity=0.265 Sum_probs=196.6
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccC---CcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQG---SMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
.++|...+.||+|+||+||+|+. .+|+.||||+++.. .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35688899999999999999986 46899999998753 223335678899999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHE-LANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999886543 68999999999999999999998 77 99999999999999999999999999986433
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... ..
T Consensus 302 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~-----------~~ 367 (446)
T 4ejn_A 302 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILMEE-----------IR 367 (446)
T ss_dssp -------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCC-----------CC
T ss_pred CC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCC-----------CC
Confidence 22 223446799999999999999999999999999999999999999965433 22222222111 01
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRP-----TMSEVVKD 898 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 898 (955)
. +.....++.+++.+||+.||.+|| +++|++++
T Consensus 368 ~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 F----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 1 112236788999999999999999 99999974
No 150
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=361.26 Aligned_cols=254 Identities=17% Similarity=0.189 Sum_probs=209.1
Q ss_pred hcCCCccCeeeccCceEEEEEE------eCCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc---CCCcceEEEEEEeCC
Q 002189 627 TNNFSDANDVGSGGYGKVYKGT------LPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH---HKNLVSLLGFCFDRG 697 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~ 697 (955)
.++|...+.||+|+||+||+|+ ..+++.||||+++.. ...++.+|++++++++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4678888999999999999994 446889999999754 3456888888888886 999999999999999
Q ss_pred eEEEEEEecCCCCcccccCCC---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC----------
Q 002189 698 EQMLIYEFVPNGSLGDSLSGK---NGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---------- 764 (955)
Q Consensus 698 ~~~lV~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---------- 764 (955)
..++||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccccc
Confidence 999999999999999998632 2346999999999999999999999988 999999999999998
Q ss_pred -CCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHH
Q 002189 765 -RLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRT 843 (955)
Q Consensus 765 -~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~ 843 (955)
++.+||+|||+|+.+.............||++|||||++.+..++.++|||||||++|||+||+.||......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------ 291 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG------ 291 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT------
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC------
Confidence 8999999999997654333334445677999999999999999999999999999999999999998643210
Q ss_pred HHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCC-CCHHHHHHHHHHHHHHc
Q 002189 844 VMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDR-PTMSEVVKDIENILQQA 906 (955)
Q Consensus 844 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~~~ 906 (955)
. ..+....... ...+.+.+++.+|+..+|.+| |+++++.+.|++++++.
T Consensus 292 ----------~-~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 292 ----------E-CKPEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ----------E-EEECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------c-eeechhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0 0011111111 123567789999999999998 78999999999998764
No 151
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.9e-38 Score=353.69 Aligned_cols=263 Identities=21% Similarity=0.287 Sum_probs=209.5
Q ss_pred cCHHHHHHHhcCCCcc-CeeeccCceEEEEEEeC-CCcEEEEEEcccCC--cchhHHHHHHHHHHHhcc-CCCcceEEEE
Q 002189 618 FSFEEVKKYTNNFSDA-NDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVH-HKNLVSLLGF 692 (955)
Q Consensus 618 ~~~~el~~~~~~f~~~-~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~ 692 (955)
+.++..+...+.|... +.||+|+||+||+|+.. +|+.||||+++... ......+.+|+.+++.++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3344455666777777 88999999999999865 68999999987532 233567899999999995 6999999999
Q ss_pred EEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---CCceE
Q 002189 693 CFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---RLNAK 769 (955)
Q Consensus 693 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---~~~~k 769 (955)
+.+.+..++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEE
Confidence 999999999999999999999987665567999999999999999999999998 999999999999998 78999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh
Q 002189 770 VADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 770 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
|+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....+....
T Consensus 175 L~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~- 249 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLNISQVN- 249 (327)
T ss_dssp ECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC-
T ss_pred EeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHHHHhcc-
Confidence 99999998765332 2234579999999999999999999999999999999999999997544322 111111110
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..............+.+++.+||+.||.+|||++|++++
T Consensus 250 ----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 250 ----------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ----------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 011111112334678899999999999999999999875
No 152
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=9.4e-39 Score=377.04 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=208.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++++++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888899999999999999875 79999999986532 22345688999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987765556999999999999999999999998 999999999999999999999999999876543
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch--HHHHHHHHHhhhhhhhhhhhccCC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY--IVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+....... ..
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~----------~~ 406 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----------PE 406 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC----------CC
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc----------cc
Confidence 2 23345799999999999998999999999999999999999999975421 112222111111 11
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRP-----TMSEVVKD 898 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 898 (955)
.. ......++.+++.+||+.||.+|| +++|++++
T Consensus 407 ~~----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 407 EY----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred cC----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11 122336788999999999999999 78999875
No 153
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=355.36 Aligned_cols=263 Identities=25% Similarity=0.431 Sum_probs=200.8
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHH--HHhccCCCcceEEEEEEe-----CCeEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIEL--LSRVHHKNLVSLLGFCFD-----RGEQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~-----~~~~~ 700 (955)
++|...+.||+|+||+||+|+. +++.||||+++.. ....+..|.++ +..++||||+++++++.. ....+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 5688889999999999999987 6899999998643 23445555554 445899999999987653 22568
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc---------cCCCeeccCCCCccEEEcCCCceEEe
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL---------ANPPIIHRDIKSSNILLDERLNAKVA 771 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------~~~~ivHrDlk~~NIll~~~~~~kl~ 771 (955)
+||||+++|+|.+++... ..++..+..++.|+++||+|||+. + |+||||||+|||++.++.+||+
T Consensus 89 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEEC
T ss_pred EEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEe
Confidence 999999999999999654 358999999999999999999998 6 9999999999999999999999
Q ss_pred ecccccccCCCCC------cceeeeeecCCCCCCHHHhhh-------CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHH
Q 002189 772 DFGLSKSMSDSEK------DHITTQVKGTMGYLDPEYYMT-------QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIV 838 (955)
Q Consensus 772 DFGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~ 838 (955)
|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+..+....
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987653321 111223469999999999986 456779999999999999999988875332210
Q ss_pred ----------------HHHHHHHhhhhhhhhhhhccCCcCCC--CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 002189 839 ----------------REIRTVMDKKKELYNLYELIDPTIGL--STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIE 900 (955)
Q Consensus 839 ----------------~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 900 (955)
......... ....+.+.. ........++.+++.+||+.||.+|||++|+++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSR--------EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTT--------SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcc--------cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 111111100 111122211 122345678999999999999999999999999999
Q ss_pred HHHHHcCC
Q 002189 901 NILQQAGL 908 (955)
Q Consensus 901 ~~~~~~~~ 908 (955)
+++.....
T Consensus 315 ~ll~~~~~ 322 (336)
T 3g2f_A 315 ELMMIWER 322 (336)
T ss_dssp HHHHCCCC
T ss_pred HHHHHHHh
Confidence 99976543
No 154
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-38 Score=357.30 Aligned_cols=251 Identities=22% Similarity=0.337 Sum_probs=202.9
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 703 (955)
..++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4567899999999999999999865 689999999976433 245688888888 7999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC----CceEEeeccccccc
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER----LNAKVADFGLSKSM 779 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~----~~~kl~DFGla~~~ 779 (955)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999887554 6899999999999999999999998 9999999999998543 35999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCc--hHHHHHHHHHhhhhhhhhhhhc
Q 002189 780 SDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGK--YIVREIRTVMDKKKELYNLYEL 857 (955)
Q Consensus 780 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 857 (955)
..... ......||+.|+|||++.+..++.++|||||||++|||++|..||.... ...+....+....
T Consensus 171 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--------- 239 (342)
T 2qr7_A 171 RAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--------- 239 (342)
T ss_dssp BCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC---------
T ss_pred cCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC---------
Confidence 54322 2334578999999999998889999999999999999999999997532 2222222222111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 858 IDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 858 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+ ............+.+++.+||+.||++||+++|++++
T Consensus 240 ~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 240 FS--LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CC--CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cc--cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 1111112234678899999999999999999999986
No 155
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=363.05 Aligned_cols=273 Identities=23% Similarity=0.320 Sum_probs=215.2
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCC--eEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG--EQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~ 703 (955)
++|...++||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46788899999999999999975 589999999875332 23467889999999999999999999998765 779999
Q ss_pred EecCCCCcccccCCCC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE----cCCCceEEeecccccc
Q 002189 704 EFVPNGSLGDSLSGKN-GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL----DERLNAKVADFGLSKS 778 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll----~~~~~~kl~DFGla~~ 778 (955)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997654 234899999999999999999999998 9999999999999 7888899999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhh--------CCCCChhhhHHHHHHHHHHHhCCCCCcCC---chHHHHHHHHHhh
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMT--------QQLTEKSDVYSFGVLMLELLTGRRPIERG---KYIVREIRTVMDK 847 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDvwS~Gv~l~elltg~~P~~~~---~~~~~~~~~~~~~ 847 (955)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ....+.+..+...
T Consensus 166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 166 LEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 654322 234569999999999875 56788999999999999999999999632 2223333333332
Q ss_pred hhhh--hhhhhc------cCCc--CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 848 KKEL--YNLYEL------IDPT--IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 848 ~~~~--~~~~~~------~d~~--l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
.... ..+... ..+. ............+.+++.+||+.||++||+++|+++.+++++++.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 2100 000000 0001 112233566678899999999999999999999999999998653
No 156
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.4e-38 Score=343.96 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=206.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999864 689999999865432 23467889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc---eEEeecccccccC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN---AKVADFGLSKSMS 780 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DFGla~~~~ 780 (955)
||+++|+|.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999988876543 6899999999999999999999998 999999999999987655 9999999998765
Q ss_pred CCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+..... ....+
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~------~~~~~ 229 (284)
T 3kk8_A 160 DSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAY------DYPSP 229 (284)
T ss_dssp SSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC------CCCTT
T ss_pred cCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhccc------cCCch
Confidence 4322 23456999999999999999999999999999999999999999654332 22222211110 10111
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........+.+++.+||+.||++||+++|++++
T Consensus 230 -----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 -----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -----hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 111233678899999999999999999999985
No 157
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.7e-39 Score=365.65 Aligned_cols=266 Identities=24% Similarity=0.375 Sum_probs=194.5
Q ss_pred HHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccC--CcchhHHHHHHHHHHHhcc-CCCcceEEEEEEeCC--e
Q 002189 625 KYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQG--SMQGGQEFKMEIELLSRVH-HKNLVSLLGFCFDRG--E 698 (955)
Q Consensus 625 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~ 698 (955)
...++|...+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 4567899999999999999999986 47899999998653 2233466889999999997 999999999998654 6
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.|+||||++ |+|.++++.. .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999997 6898888653 5899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCC-------------------CcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHH
Q 002189 779 MSDSE-------------------KDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIV 838 (955)
Q Consensus 779 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~ 838 (955)
..... .....+...||+.|+|||++.+ ..++.++||||+||++|||++|++||..... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~ 237 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST-M 237 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-H
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH-H
Confidence 64311 1112334679999999999986 6789999999999999999999999965433 2
Q ss_pred HHHHHHHhhhhh--hhhhh---------------hcc---CCcCCCC------------CCHHHHHHHHHHHHHhhccCC
Q 002189 839 REIRTVMDKKKE--LYNLY---------------ELI---DPTIGLS------------TTLKGFEKYVDLALKCVQESG 886 (955)
Q Consensus 839 ~~~~~~~~~~~~--~~~~~---------------~~~---d~~l~~~------------~~~~~~~~l~~li~~cl~~dP 886 (955)
+.+..+...... ...+. ... ....... .......++.+|+.+||+.||
T Consensus 238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 333332211100 00000 000 0000000 000223578899999999999
Q ss_pred CCCCCHHHHHHH
Q 002189 887 DDRPTMSEVVKD 898 (955)
Q Consensus 887 ~~RPs~~evl~~ 898 (955)
++|||++|++++
T Consensus 318 ~~R~t~~e~l~H 329 (388)
T 3oz6_A 318 NKRISANDALKH 329 (388)
T ss_dssp GGSCCHHHHTTS
T ss_pred ccCCCHHHHhCC
Confidence 999999999875
No 158
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=345.16 Aligned_cols=252 Identities=29% Similarity=0.391 Sum_probs=201.5
Q ss_pred CCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEecC
Q 002189 629 NFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEFVP 707 (955)
Q Consensus 629 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 707 (955)
.|.....||+|+||+||+|+. .+++.||||+++.......+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345566899999999999986 4688999999987665556789999999999999999999999999999999999999
Q ss_pred CCCcccccCCCC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC-CCceEEeecccccccCCCCCc
Q 002189 708 NGSLGDSLSGKN-GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE-RLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 708 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++|.+++.... ...+++..+..++.|+++||+|||+.+ ++||||||+||+++. ++.+||+|||+++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999887542 345778999999999999999999998 999999999999987 8999999999998764322
Q ss_pred ceeeeeecCCCCCCHHHhhhCC--CCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQ--LTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~--~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
.......||+.|+|||++.+.. ++.++||||||+++|||++|+.||............... ....+.+.
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---------~~~~~~~~ 248 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM---------FKVHPEIP 248 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH---------HCCCCCCC
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc---------cccccccc
Confidence 1223456899999999998654 889999999999999999999999653332221111100 01112221
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.....++.+++.+||+.||++||+++|++++
T Consensus 249 ----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 249 ----ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2233678899999999999999999999864
No 159
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.2e-38 Score=364.93 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=192.5
Q ss_pred cCCCcc-CeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHh-ccCCCcceEEEEEEe----CCeEE
Q 002189 628 NNFSDA-NDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSR-VHHKNLVSLLGFCFD----RGEQM 700 (955)
Q Consensus 628 ~~f~~~-~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~----~~~~~ 700 (955)
++|... ++||+|+||+||+|+.. +|+.||||+++. ...+.+|++++.+ .+||||+++++++.. .+..|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 345555 68999999999999864 689999999864 2457788888754 489999999999876 56789
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---CCceEEeeccccc
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---RLNAKVADFGLSK 777 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DFGla~ 777 (955)
+||||+++|+|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998765567999999999999999999999998 999999999999998 7899999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHH---HHHHHHHhhhhhhhhh
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIV---REIRTVMDKKKELYNL 854 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~---~~~~~~~~~~~~~~~~ 854 (955)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+....
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~------ 283 (400)
T 1nxk_A 213 ETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ------ 283 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC------
T ss_pred ccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc------
Confidence 764322 2334679999999999999999999999999999999999999996432210 0111111110
Q ss_pred hhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 002189 855 YELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDI 899 (955)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 899 (955)
.....+ .......++.+++.+||+.||++|||++|++++-
T Consensus 284 ~~~~~~-----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 284 YEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp CCCCTT-----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ccCCCc-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 000011 1112346789999999999999999999999863
No 160
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=356.44 Aligned_cols=244 Identities=25% Similarity=0.362 Sum_probs=204.3
Q ss_pred HHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc--------hhHHHHHHHHHHHhccCCCcceEEEEEEe
Q 002189 625 KYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ--------GGQEFKMEIELLSRVHHKNLVSLLGFCFD 695 (955)
Q Consensus 625 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 695 (955)
...++|...+.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 3457899999999999999999985 47899999998764321 22457789999999999999999999999
Q ss_pred CCeEEEEEEecCCC-CcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecc
Q 002189 696 RGEQMLIYEFVPNG-SLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFG 774 (955)
Q Consensus 696 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFG 774 (955)
.+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence 99999999999877 9999887654 6899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhh
Q 002189 775 LSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYN 853 (955)
Q Consensus 775 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 853 (955)
+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 176 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------- 236 (335)
T 3dls_A 176 SAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------- 236 (335)
T ss_dssp TCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------
T ss_pred cceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------
Confidence 9987654332 234679999999999998876 78999999999999999999999642210
Q ss_pred hhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 854 LYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
......+ ......++.+++.+||+.||.+||+++|++++
T Consensus 237 ~~~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 VEAAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TTTCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HhhccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011111 11123678899999999999999999999986
No 161
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-38 Score=360.64 Aligned_cols=243 Identities=25% Similarity=0.320 Sum_probs=192.8
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc---hhHHHHHHHHH-HHhccCCCcceEEEEEEeCCeEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ---GGQEFKMEIEL-LSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
++|...+.||+|+||+||+|+.. +++.||||++++.... ..+.+.+|..+ ++.++|||||++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56888999999999999999975 5889999999764322 23456667766 5678999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 118 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999887543 6888999999999999999999998 999999999999999999999999999864332
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .......||+.|+|||++.+..++.++|||||||++|||++|..||..... .+....+..... .+.+
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~~~~~-------~~~~-- 260 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-AEMYDNILNKPL-------QLKP-- 260 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-HHHHHHHHHSCC-------CCCS--
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhccc-------CCCC--
Confidence 2 223456799999999999999999999999999999999999999975432 222222222110 0111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMS 893 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 893 (955)
.....+.+++.+||+.||.+||++.
T Consensus 261 ------~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 261 ------NITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp ------SSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred ------CCCHHHHHHHHHHcccCHHhCCCCC
Confidence 1236788999999999999999975
No 162
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-38 Score=367.30 Aligned_cols=247 Identities=26% Similarity=0.403 Sum_probs=205.6
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46788899999999999999975 799999999865321 22357889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999997644 6899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ......+.... ..
T Consensus 171 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~---------~~--- 234 (476)
T 2y94_A 171 F---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-PTLFKKICDGI---------FY--- 234 (476)
T ss_dssp C---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-HHHHHHHHTTC---------CC---
T ss_pred c---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-HHHHHHHhcCC---------cC---
Confidence 2 234579999999999998765 6899999999999999999999975432 22222222111 00
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+......+.+++.+||+.||.+|||++|++++
T Consensus 235 ---~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 ---TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 011123578899999999999999999999975
No 163
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=8.2e-38 Score=364.83 Aligned_cols=266 Identities=20% Similarity=0.317 Sum_probs=211.4
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccC-CCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHH-KNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...++||+|+||+||+|+. .+++.||||+++.... ..++.+|+++++.++| ++|..+..++.+.+..+||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 35788999999999999999986 5789999998775433 2458899999999986 566677777778888999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE---cCCCceEEeecccccccCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---DERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DFGla~~~~~ 781 (955)
|+ +++|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||| +.++.+||+|||+++.+..
T Consensus 84 ~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 999999986432 36999999999999999999999998 9999999999999 6889999999999987764
Q ss_pred CCCcc-----eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCc--hHHHHHHHHHhhhhhhhhh
Q 002189 782 SEKDH-----ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGK--YIVREIRTVMDKKKELYNL 854 (955)
Q Consensus 782 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~--~~~~~~~~~~~~~~~~~~~ 854 (955)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .....+..+...... . .
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~-~ 236 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-T-S 236 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-S-C
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-c-c
Confidence 43211 1225679999999999999999999999999999999999999997532 222222222221110 0 0
Q ss_pred hhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCC
Q 002189 855 YELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLN 909 (955)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 909 (955)
.+.+.. ....++.+++.+||+.||++||++++|++.|++++.+.+..
T Consensus 237 ~~~l~~--------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~ 283 (483)
T 3sv0_A 237 IEALCR--------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQ 283 (483)
T ss_dssp HHHHHT--------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhc--------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCC
Confidence 000101 12367899999999999999999999999999998876543
No 164
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.7e-38 Score=351.95 Aligned_cols=256 Identities=20% Similarity=0.270 Sum_probs=197.2
Q ss_pred cCCCcc-CeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEEEE
Q 002189 628 NNFSDA-NDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 628 ~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 704 (955)
+.|... +.||+|+||+||+|+. .+++.||||+++.......+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 456664 6799999999999985 47899999999876555567899999999985 79999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc---eEEeecccccccCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN---AKVADFGLSKSMSD 781 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DFGla~~~~~ 781 (955)
|+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999987543 6899999999999999999999998 999999999999998776 99999999976542
Q ss_pred CCC-----cceeeeeecCCCCCCHHHhhh-----CCCCChhhhHHHHHHHHHHHhCCCCCcCCchH-------------H
Q 002189 782 SEK-----DHITTQVKGTMGYLDPEYYMT-----QQLTEKSDVYSFGVLMLELLTGRRPIERGKYI-------------V 838 (955)
Q Consensus 782 ~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~-------------~ 838 (955)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 211 111223469999999999975 56899999999999999999999999643210 0
Q ss_pred HHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 839 REIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..+...+.... ..............+.+++.+||+.||.+|||++|++++
T Consensus 247 ~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 247 NMLFESIQEGK----------YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHCC----------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhccC----------cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111111100 000000001123678899999999999999999999874
No 165
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-38 Score=351.25 Aligned_cols=261 Identities=20% Similarity=0.282 Sum_probs=201.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc---hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ---GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
.++|...+.||+|+||+||+|+.. +++.||||+++..... ..+.+.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467899999999999999999965 6899999998754322 236788999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999987543 6899999999999999999999998 999999999999999999999999999876543
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
.. .......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .+........ ..+
T Consensus 188 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~--------~~~-- 254 (309)
T 2h34_A 188 KL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI--------PRP-- 254 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC--------CCG--
T ss_pred cc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC--------CCc--
Confidence 22 2223456899999999999999999999999999999999999999754332 1111111110 000
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHHHHHc
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRP-TMSEVVKDIENILQQA 906 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 906 (955)
.......+..+.+++.+||+.||++|| +++++++.|++++...
T Consensus 255 -~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 255 -STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 011112235788999999999999999 9999999999876444
No 166
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.2e-39 Score=357.16 Aligned_cols=245 Identities=21% Similarity=0.304 Sum_probs=180.5
Q ss_pred cCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-CCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002189 633 ANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-HKNLVSLLGFCFDRGEQMLIYEFVPNGS 710 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gs 710 (955)
.+.||+|+||+||+|+.. +|+.||||++... ....+.+|+++++.++ ||||+++++++.+++..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999975 6899999998642 3467889999999997 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC---ceEEeecccccccCCCCCcce
Q 002189 711 LGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL---NAKVADFGLSKSMSDSEKDHI 787 (955)
Q Consensus 711 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DFGla~~~~~~~~~~~ 787 (955)
|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++ .+||+|||+++...... ..
T Consensus 93 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~ 165 (325)
T 3kn6_A 93 LFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QP 165 (325)
T ss_dssp HHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Cc
Confidence 999987643 6899999999999999999999998 99999999999998765 89999999998764432 22
Q ss_pred eeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch------HHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 788 TTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY------IVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 788 ~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+....+... +..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~-----------~~~ 234 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG-----------DFS 234 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT-----------CCC
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC-----------CCC
Confidence 3345689999999999999999999999999999999999999974322 11111111110 000
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...........++.+++.+||+.||.+||+++|++++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0100011234678999999999999999999999864
No 167
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.4e-39 Score=357.89 Aligned_cols=263 Identities=24% Similarity=0.366 Sum_probs=193.2
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-CCCcceEEEEEEe--------CC
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-HKNLVSLLGFCFD--------RG 697 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--------~~ 697 (955)
.+|...++||+|+||+||+|+.. +|+.||||++........+.+.+|+.++.++. ||||+++++++.. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 46788899999999999999964 78999999987666556678999999999996 9999999999953 33
Q ss_pred eEEEEEEecCCCCcccccCCC-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccc
Q 002189 698 EQMLIYEFVPNGSLGDSLSGK-NGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLS 776 (955)
Q Consensus 698 ~~~lV~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla 776 (955)
..++||||++ |+|.+++... ....+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccc
Confidence 5799999995 7998887642 2346999999999999999999999865 45999999999999999999999999999
Q ss_pred cccCCCCCcc----------eeeeeecCCCCCCHHHh---hhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHH
Q 002189 777 KSMSDSEKDH----------ITTQVKGTMGYLDPEYY---MTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRT 843 (955)
Q Consensus 777 ~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~ 843 (955)
+......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----- 260 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----- 260 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----
Confidence 8765432211 11134689999999998 56678999999999999999999999996432210
Q ss_pred HHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 002189 844 VMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAGLNP 910 (955)
Q Consensus 844 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 910 (955)
..... .. ..........+.+++.+||+.||.+||+++|++++|+.+.+.....+
T Consensus 261 ~~~~~---------~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~ 314 (337)
T 3ll6_A 261 IVNGK---------YS----IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP 314 (337)
T ss_dssp --------------CC----CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCT
T ss_pred hhcCc---------cc----CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCC
Confidence 11100 00 00011112457799999999999999999999999999988765443
No 168
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.8e-38 Score=342.57 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=202.7
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc------hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ------GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 700 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999975 6899999998754321 3567999999999999999999999999999999
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC----ceEEeecccc
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL----NAKVADFGLS 776 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DFGla 776 (955)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999986543 6899999999999999999999998 99999999999999877 8999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhh
Q 002189 777 KSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYE 856 (955)
Q Consensus 777 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (955)
+...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... +....+.....
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~------- 228 (283)
T 3bhy_A 160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETLTNISAVNY------- 228 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCC-------
T ss_pred eeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-HHHHHhHhccc-------
Confidence 8764332 123456899999999999999999999999999999999999999754322 22221111100
Q ss_pred ccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 LIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..++. ........+.+++.+||+.||.+||+++|++++
T Consensus 229 ~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 229 DFDEE----YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCCHH----HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CCcch----hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 00000 001123678899999999999999999999985
No 169
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.7e-38 Score=367.53 Aligned_cols=260 Identities=23% Similarity=0.324 Sum_probs=196.1
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccC--CcchhHHHHHHHHHHHhccCCCcceEEEEEEeC------C
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQG--SMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR------G 697 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 697 (955)
.++|...+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|+++++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467889999999999999999854 6899999998753 223346788999999999999999999999654 3
Q ss_pred eEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 698 EQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 698 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
..|+||||+++ +|.+.+.. .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 57999999975 46555543 4889999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh-hhh---
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE-LYN--- 853 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~-~~~--- 853 (955)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... +.+..++..... ...
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 213 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp ----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHT
T ss_pred ecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 765332 234567999999999999999999999999999999999999999654433 333333221100 000
Q ss_pred -----hhhccC--CcCC--------------CC--CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 854 -----LYELID--PTIG--------------LS--TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 854 -----~~~~~d--~~l~--------------~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
....+. +... .. .......++.+|+.+||+.||++|||++|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000 00 001124678999999999999999999999975
No 170
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.1e-38 Score=343.50 Aligned_cols=247 Identities=30% Similarity=0.462 Sum_probs=201.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
.++|...+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 456888999999999999999865 578999999864321 2235688999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999886543 6899999999999999999999988 999999999999999999999999998654332
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .....||+.|+|||.+.+..++.++||||||+++|||++|..||...... +....+... ....
T Consensus 163 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~-----------~~~~ 226 (279)
T 3fdn_A 163 R----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRV-----------EFTF 226 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHT-----------CCCC
T ss_pred c----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-HHHHHHHhC-----------CCCC
Confidence 2 23457999999999999999999999999999999999999999754322 222211111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+......+.+++.+||+.||.+||+++|++++
T Consensus 227 ----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 ----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11223678899999999999999999999986
No 171
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.4e-38 Score=364.85 Aligned_cols=254 Identities=25% Similarity=0.373 Sum_probs=193.7
Q ss_pred HHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--------chhHHHHHHHHHHHhccCCCcceEEEEEEe
Q 002189 625 KYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--------QGGQEFKMEIELLSRVHHKNLVSLLGFCFD 695 (955)
Q Consensus 625 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 695 (955)
...++|...+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45678999999999999999999864 689999999864321 11235889999999999999999999974
Q ss_pred CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC---CceEEee
Q 002189 696 RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER---LNAKVAD 772 (955)
Q Consensus 696 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~---~~~kl~D 772 (955)
.+..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.+ +.+||+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred cCceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence 556899999999999999987654 6899999999999999999999998 9999999999999754 4599999
Q ss_pred cccccccCCCCCcceeeeeecCCCCCCHHHhhh---CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh
Q 002189 773 FGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMT---QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 773 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............+.....
T Consensus 286 FG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~ 362 (419)
T 3i6u_A 286 FGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 362 (419)
T ss_dssp SSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC
T ss_pred cccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC
Confidence 9999876533 22344679999999999863 67888999999999999999999999753322111111111100
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. ..+.. .......+.+++.+||+.||.+||+++|++++
T Consensus 363 ------~-~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 363 ------N-FIPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ------C-CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ------C-CCchh----hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0 00000 01123678899999999999999999999974
No 172
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7.8e-38 Score=354.02 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=209.0
Q ss_pred HHHHHHHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc--------hhHHHHHHHHHHHhc-cCCCcceE
Q 002189 620 FEEVKKYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ--------GGQEFKMEIELLSRV-HHKNLVSL 689 (955)
Q Consensus 620 ~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~H~niv~l 689 (955)
+.......++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 4455666788999999999999999999975 7999999998754321 134678899999999 79999999
Q ss_pred EEEEEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceE
Q 002189 690 LGFCFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAK 769 (955)
Q Consensus 690 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 769 (955)
++++...+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence 999999999999999999999999987543 6899999999999999999999998 99999999999999999999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCHHHhhhC------CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHH
Q 002189 770 VADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRT 843 (955)
Q Consensus 770 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~ 843 (955)
|+|||++..+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .....
T Consensus 241 l~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~ 316 (365)
T 2y7j_A 241 LSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-LMLRM 316 (365)
T ss_dssp ECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred EEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence 999999987754332 2346799999999998743 5788999999999999999999999754332 22222
Q ss_pred HHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 844 VMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 844 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+..... ....+.. ......+.+++.+||+.||.+||+++|++++
T Consensus 317 i~~~~~------~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 IMEGQY------QFSSPEW-----DDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHTCC------CCCHHHH-----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhCCC------CCCCccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 211110 0000000 0123568899999999999999999999874
No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.2e-38 Score=353.50 Aligned_cols=263 Identities=20% Similarity=0.277 Sum_probs=195.2
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcch--hHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQG--GQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|+. .+++.||||+++...... .+.+.+|++++++++||||+++++++.+++..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 46788999999999999999985 478999999997543322 356789999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE-----cCCCceEEeecccccc
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL-----DERLNAKVADFGLSKS 778 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll-----~~~~~~kl~DFGla~~ 778 (955)
||++ |+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||++ ++++.+||+|||+++.
T Consensus 113 e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp ECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred ecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9997 59999887554 5899999999999999999999998 9999999999999 4556699999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh-h----
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL-Y---- 852 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~---- 852 (955)
..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... +....+....... .
T Consensus 187 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 187 FGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTST
T ss_pred cCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhhh
Confidence 65332 223345689999999999875 4899999999999999999999999755433 3333332211100 0
Q ss_pred hhhhc-----cCCcCCCCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 853 NLYEL-----IDPTIGLSTT-----LKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 853 ~~~~~-----~d~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..... ..+....... .....++.+++.+||+.||.+|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00000 0000000000 0123678899999999999999999999863
No 174
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-38 Score=345.65 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=198.4
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 356888999999999999999864 68999999987543 2345789999999999999999999999999999999999
Q ss_pred ecCCCCcccccCCC--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE---cCCCceEEeeccccccc
Q 002189 705 FVPNGSLGDSLSGK--NGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---DERLNAKVADFGLSKSM 779 (955)
Q Consensus 705 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DFGla~~~ 779 (955)
|+++|+|.+++... ....+++..+..++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988542 2346899999999999999999999998 9999999999999 45678999999999866
Q ss_pred CCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 780 SDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 780 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
.... ......||+.|+|||.+. +.++.++||||||+++|||++|+.||...... +........ .
T Consensus 178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-~~~~~~~~~-----------~ 241 (285)
T 3is5_A 178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-EVQQKATYK-----------E 241 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC-----------C
T ss_pred CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-HHHhhhccC-----------C
Confidence 4332 233456999999999875 57899999999999999999999999754321 111111110 0
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+.... .......++.+++.+||+.||.+||+++|++++
T Consensus 242 ~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 242 PNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11100 001123678899999999999999999999864
No 175
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-40 Score=365.86 Aligned_cols=262 Identities=24% Similarity=0.383 Sum_probs=190.3
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHh--ccCCCcceEEEEEEeCC----eEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSR--VHHKNLVSLLGFCFDRG----EQM 700 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~ 700 (955)
.++|...+.||+|+||+||+|+.. |+.||||+++.. ....+.+|.+++.. ++||||+++++++.+.+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357899999999999999999874 899999998653 34567788888887 78999999999998876 789
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------hccCCCeeccCCCCccEEEcCCCceEEee
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLH--------ELANPPIIHRDIKSSNILLDERLNAKVAD 772 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlk~~NIll~~~~~~kl~D 772 (955)
+||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999643 5788889999999999999999 766 99999999999999999999999
Q ss_pred cccccccCCCCCcc--eeeeeecCCCCCCHHHhhhC------CCCChhhhHHHHHHHHHHHhC----------CCCCcCC
Q 002189 773 FGLSKSMSDSEKDH--ITTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVLMLELLTG----------RRPIERG 834 (955)
Q Consensus 773 FGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~ksDvwS~Gv~l~elltg----------~~P~~~~ 834 (955)
||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+|| ..||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 99997665433211 12334799999999999876 344689999999999999999 6666422
Q ss_pred chH---HHHHHHHHhhhhhhhhhhhccCCcCCCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 835 KYI---VREIRTVMDKKKELYNLYELIDPTIGLS-TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 835 ~~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
... ........ ......+..... ........+.+++.+||+.||.+|||++|+++.|+++.++.
T Consensus 232 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 232 VPSDPSVEEMRKVV--------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CC-CCCCC-CHHHH--------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCCccHHHHHHHH--------HHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 110 00011111 011122222111 12356678999999999999999999999999999886443
No 176
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-38 Score=353.26 Aligned_cols=267 Identities=23% Similarity=0.312 Sum_probs=199.8
Q ss_pred HHHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcch-----hHHHHHHHHHHHhccCCCcceEEEEEEeCC
Q 002189 624 KKYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQG-----GQEFKMEIELLSRVHHKNLVSLLGFCFDRG 697 (955)
Q Consensus 624 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 697 (955)
....++|...+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 445678999999999999999999964 68999999987532221 246889999999999999999999999999
Q ss_pred eEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 698 EQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 698 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred ceEEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence 99999999975 888877654 346888899999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh-----
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL----- 851 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~----- 851 (955)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|.+||..... .+.+..+.......
T Consensus 161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQW 237 (346)
T ss_dssp TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTS
T ss_pred eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhhh
Confidence 765332 223345789999999999764 589999999999999999999998865443 33333333221100
Q ss_pred hhhhh---ccCCcCCCCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 852 YNLYE---LIDPTIGLSTT-----LKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 852 ~~~~~---~~d~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..... .+......... .....++.+++.+||+.||.+|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000 00000000000 1223678999999999999999999999986
No 177
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=5.7e-38 Score=342.28 Aligned_cols=246 Identities=22% Similarity=0.364 Sum_probs=201.0
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccC--CcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQG--SMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 701 (955)
..++|...+.||+|+||+||+|+.. +++.||||+++.. ......++.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567899999999999999999975 7899999998754 233456788999999999 89999999999999999999
Q ss_pred EEEecCCCCcccccCCCC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---------------
Q 002189 702 IYEFVPNGSLGDSLSGKN--GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE--------------- 764 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~--------------- 764 (955)
||||+++|+|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999987532 246899999999999999999999998 999999999999984
Q ss_pred ----CCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHH
Q 002189 765 ----RLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVR 839 (955)
Q Consensus 765 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~ 839 (955)
...+||+|||+++....... ..||+.|+|||.+.+. .++.++|||||||++|||++|.+|+........
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~ 239 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQV------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE 239 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSCC------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH
T ss_pred ccCCceEEEEcccccccccCCccc------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH
Confidence 44799999999987654322 3489999999999866 566899999999999999999987654432211
Q ss_pred HHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 840 EIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.... ..+... ......+.+++.+||+.||++||+++|++++
T Consensus 240 ----~~~~----------~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 240 ----IRQG----------RLPRIP----QVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ----HHTT----------CCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----HHcC----------CCCCCC----cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1110 111111 1223678899999999999999999999864
No 178
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.2e-38 Score=343.57 Aligned_cols=264 Identities=21% Similarity=0.322 Sum_probs=204.1
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56888999999999999999875 789999999875432 223678899999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|++ |+|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 69999887665556899999999999999999999998 99999999999999999999999999987653321
Q ss_pred cceeeeeecCCCCCCHHHhhhCC-CCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhh-----hhh--h
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQ-LTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELY-----NLY--E 856 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-----~~~--~ 856 (955)
......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||...... +....+........ ... .
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 159 --TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp --CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred --ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcCc
Confidence 122346899999999998765 799999999999999999999999765433 22222222111000 000 0
Q ss_pred ccCCcCCCC--C-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 LIDPTIGLS--T-----TLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 ~~d~~l~~~--~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...+..... . ......++.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 001111000 0 01123678899999999999999999999874
No 179
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-38 Score=353.93 Aligned_cols=264 Identities=28% Similarity=0.387 Sum_probs=201.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 356888899999999999999975 5899999998654333 2356789999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999999988765443 5899999999999999999999998 9999999999999999999999999998764332
Q ss_pred CcceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh-----------h
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE-----------L 851 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~-----------~ 851 (955)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||......... ..+...... .
T Consensus 179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL-YHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHHHHHC
T ss_pred --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHHHHHhCCCChhhhhHhhhc
Confidence 223345699999999999875 7899999999999999999999999765443222 211111000 0
Q ss_pred hhhhhccCCcCCCCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 852 YNLYELIDPTIGLSTT-----LKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 852 ~~~~~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........+....... ......+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000111111111111 1234678999999999999999999999975
No 180
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-38 Score=368.65 Aligned_cols=194 Identities=25% Similarity=0.422 Sum_probs=154.3
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEeC-----CeE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR-----GEQ 699 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 699 (955)
++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++... +..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57889999999999999999864 78999999987532 23446789999999999999999999999543 568
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
|+||||+ +|+|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEecc-ccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 9999998 578988887543 6899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCc-------------------------ceeeeeecCCCCCCHHHhh-hCCCCChhhhHHHHHHHHHHHhC
Q 002189 780 SDSEKD-------------------------HITTQVKGTMGYLDPEYYM-TQQLTEKSDVYSFGVLMLELLTG 827 (955)
Q Consensus 780 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~~-~~~~~~ksDvwS~Gv~l~elltg 827 (955)
...... ...+..+||+.|+|||++. ...++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 532211 1234467899999999874 56799999999999999999993
No 181
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.3e-38 Score=355.66 Aligned_cols=259 Identities=25% Similarity=0.411 Sum_probs=203.7
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
++|...+.||+|+||+||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46888899999999999999975 689999999876532 3346789999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-cCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL-ANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
+++|+|.+++.... .+++..+..++.+++.||+|||+. + |+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 99999999987543 589999999999999999999985 7 999999999999999999999999999765321
Q ss_pred cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHH--HHhhh--------------
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRT--VMDKK-------------- 848 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~--~~~~~-------------- 848 (955)
......||+.|+|||++.+..++.++|||||||++|||++|+.||............ .....
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 223457999999999999999999999999999999999999999754321110000 00000
Q ss_pred ---------------hhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 849 ---------------KELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 849 ---------------~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.....+.....+.. .......++.+++.+||+.||.+|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKL---PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCC---CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCC---CcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000001111 111234578999999999999999999999986
No 182
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-38 Score=347.13 Aligned_cols=251 Identities=23% Similarity=0.349 Sum_probs=203.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 457888999999999999999865 7899999999865554556789999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE---cCCCceEEeecccccccCCC
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---DERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DFGla~~~~~~ 782 (955)
+++|+|.+++...+ .+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 88 VSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999886543 6899999999999999999999998 9999999999999 78899999999999765332
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
. .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+..... . .++
T Consensus 163 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~------~-~~~-- 228 (304)
T 2jam_A 163 I----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIKEGYY------E-FES-- 228 (304)
T ss_dssp T----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHCCC------C-CCT--
T ss_pred c----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCCC------C-CCc--
Confidence 1 2234689999999999999999999999999999999999999965432 222222211110 0 011
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.........+.+++.+||+.||.+||+++|++++
T Consensus 229 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 --PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234678999999999999999999999975
No 183
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.4e-38 Score=370.58 Aligned_cols=251 Identities=23% Similarity=0.356 Sum_probs=205.6
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999975 699999999865322 22356889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 704 EFVPNGSLGDSLSGKN--GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999886543 346899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch---HHHHHHHHHhhhhhhhhhhhcc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY---IVREIRTVMDKKKELYNLYELI 858 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 858 (955)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+....
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~---------- 409 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA---------- 409 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC----------
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc----------
Confidence 332 22345799999999999999999999999999999999999999975421 122222221110
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHHH
Q 002189 859 DPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTM-----SEVVKD 898 (955)
Q Consensus 859 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 898 (955)
.. .+......+.+++.+||+.||.+||++ +|++++
T Consensus 410 -~~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 410 -VT----YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -CC----CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -cC----CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 01 112233678899999999999999965 677753
No 184
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.9e-38 Score=343.45 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=205.2
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 56788899999999999999975 57899999986532 223467889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 95 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp ECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999876543 6899999999999999999999998 9999999999999999999999999998764322
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... +........ ....
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~-----------~~~~- 234 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKN-----------EYSI- 234 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTT-----------CCCC-
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhhc-----------cCCC-
Confidence 2 223456999999999999999999999999999999999999999754322 211111111 0011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......+.+++.+||+.||++||+++|++++
T Consensus 235 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 ---PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11223578899999999999999999999986
No 185
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=344.83 Aligned_cols=249 Identities=24% Similarity=0.382 Sum_probs=183.4
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc---chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM---QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688889999999999999986 5789999999864321 12367899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp ECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999887542 46899999999999999999999998 9999999999999999999999999998765332
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ... .......
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~-------------~~~~~~~- 229 (278)
T 3cok_A 167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-TLN-------------KVVLADY- 229 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------------CCSSCC-
T ss_pred C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-HHH-------------HHhhccc-
Confidence 2 1223568999999999999899999999999999999999999997433211 000 0000000
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..+.....++.+++.+||+.||++||+++|++++
T Consensus 230 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 -EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1112233678899999999999999999999864
No 186
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.1e-38 Score=344.27 Aligned_cols=252 Identities=26% Similarity=0.403 Sum_probs=189.7
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcch-h-HHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQG-G-QEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|+..+.||+|+||+||+|+. .+|+.||||+++...... . +.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45788899999999999999996 478999999997643322 2 33445556688889999999999999999999999
Q ss_pred EecCCCCcccccCC--CCCCCCCHHHHHHHHHHHHHHHHHhhhc-cCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 704 EFVPNGSLGDSLSG--KNGIRLDWIRRLKIALGAARGLSYLHEL-ANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 704 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
||++ |+|.+++.. .....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 588776653 1234799999999999999999999998 8 9999999999999999999999999998765
Q ss_pred CCCCcceeeeeecCCCCCCHHHh----hhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhh
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYY----MTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYE 856 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (955)
.... .....||+.|+|||.+ .+..++.++||||||+++|||++|+.||.................
T Consensus 162 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------- 230 (290)
T 3fme_A 162 DDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-------- 230 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC--------
T ss_pred cccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC--------
Confidence 4322 2334699999999996 456789999999999999999999999976444333333332221
Q ss_pred ccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 LIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+... ......++.+++.+||+.||++|||++|++++
T Consensus 231 --~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 231 --SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --CCCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --CCCcc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 11111 11233678999999999999999999999985
No 187
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.5e-38 Score=350.55 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=205.4
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 56788899999999999999975 57899999986532 233467889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 121 e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 121 ELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999876543 6899999999999999999999998 9999999999999999999999999998764332
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
. ......||..|+|||++.+..++.++||||||+++|||++|+.||...... +....+.... ..+.
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~-----------~~~~ 261 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNE-----------YSIP 261 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTC-----------CCCC
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHhcCC-----------CCCC
Confidence 2 223456999999999999999999999999999999999999999754322 2221111110 0111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
......+.+++.+||+.||++||+++|++++
T Consensus 262 ----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 ----KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1123568899999999999999999999985
No 188
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.1e-37 Score=347.79 Aligned_cols=257 Identities=19% Similarity=0.329 Sum_probs=203.7
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-CCCcceEEEEEEe--CCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-HKNLVSLLGFCFD--RGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5688889999999999999985 57899999998743 3467899999999997 9999999999988 66789999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC-ceEEeecccccccCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL-NAKVADFGLSKSMSDS 782 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DFGla~~~~~~ 782 (955)
||+++++|.+++. .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 9999999998875 3788999999999999999999998 99999999999999776 8999999999876543
Q ss_pred CCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh--hhhhhhh---
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK--ELYNLYE--- 856 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 856 (955)
.. .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||..+....+.+........ .......
T Consensus 185 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 QE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred Cc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 32 233568999999999987 67899999999999999999999999765544443333222111 0000000
Q ss_pred -ccCCc----------------CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 -LIDPT----------------IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 -~~d~~----------------l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..++. ...........++.+++.+||+.||.+|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000 0011111234778999999999999999999999974
No 189
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-37 Score=340.13 Aligned_cols=246 Identities=28% Similarity=0.421 Sum_probs=204.5
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888899999999999999865 67899999986432 122367899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999887543 6899999999999999999999988 9999999999999999999999999997654322
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
.....|++.|+|||.+.+..++.++||||||+++|||++|..||...... +....+... +...
T Consensus 169 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~-----------~~~~- 231 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-ETHRRIVNV-----------DLKF- 231 (284)
T ss_dssp ----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTT-----------CCCC-
T ss_pred ----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-HHHHHHhcc-----------ccCC-
Confidence 22356899999999999999999999999999999999999999754332 111111111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 864 LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 864 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+......+.+++.+||+.||.+||+++|++++
T Consensus 232 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 ---PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ---CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 11223678899999999999999999999986
No 190
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=355.07 Aligned_cols=260 Identities=21% Similarity=0.353 Sum_probs=203.2
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEe----CCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFD----RGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~l 701 (955)
.++|...+.||+|+||+||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35788899999999999999986 5789999999876655666789999999999999999999999873 347899
Q ss_pred EEEecCCCCcccccCCC--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 702 IYEFVPNGSLGDSLSGK--NGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999988642 2346899999999999999999999998 999999999999999999999999998765
Q ss_pred CCCCCcc-------eeeeeecCCCCCCHHHhhhCC---CCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh
Q 002189 780 SDSEKDH-------ITTQVKGTMGYLDPEYYMTQQ---LTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 780 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
....... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-- 262 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-- 262 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--
Confidence 3211000 011235799999999987543 6899999999999999999999985211000000001100
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENI 902 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 902 (955)
.............+.+++.+||+.||.+||+++|+++.|+.+
T Consensus 263 -----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 263 -----------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp -----------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred -----------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 000111122346789999999999999999999999999876
No 191
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.8e-38 Score=355.24 Aligned_cols=264 Identities=20% Similarity=0.328 Sum_probs=207.8
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcch-----------------hHHHHHHHHHHHhccCCCcceE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQG-----------------GQEFKMEIELLSRVHHKNLVSL 689 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l 689 (955)
.++|...+.||+|+||+||+|+. +|+.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788999999999999999998 89999999986432111 1789999999999999999999
Q ss_pred EEEEEeCCeEEEEEEecCCCCcccc------cCCCCCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCCeeccCCCCccEEE
Q 002189 690 LGFCFDRGEQMLIYEFVPNGSLGDS------LSGKNGIRLDWIRRLKIALGAARGLSYLHE-LANPPIIHRDIKSSNILL 762 (955)
Q Consensus 690 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlk~~NIll 762 (955)
++++.+.+..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999999 665445689999999999999999999998 88 9999999999999
Q ss_pred cCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhC-CCCC-hhhhHHHHHHHHHHHhCCCCCcCCchHHHH
Q 002189 763 DERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQ-QLTE-KSDVYSFGVLMLELLTGRRPIERGKYIVRE 840 (955)
Q Consensus 763 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-ksDvwS~Gv~l~elltg~~P~~~~~~~~~~ 840 (955)
+.++.+||+|||+++..... ......||..|+|||.+.+. .++. ++||||||+++|||++|+.||.......+.
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999876432 23345699999999999877 6666 999999999999999999999765443333
Q ss_pred HHHHHhhhhhhhhhh-hccCC---cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 841 IRTVMDKKKELYNLY-ELIDP---TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 841 ~~~~~~~~~~~~~~~-~~~d~---~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...+........... ....+ .............+.+++.+||+.||.+||+++|++++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 332222111000000 00000 00000012334678999999999999999999999963
No 192
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=8.7e-38 Score=341.95 Aligned_cols=248 Identities=27% Similarity=0.423 Sum_probs=200.0
Q ss_pred CCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEe----CCeEEEE
Q 002189 630 FSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFD----RGEQMLI 702 (955)
Q Consensus 630 f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV 702 (955)
|...+.||+|+||+||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 556678999999999999864 68899999987543 2334678999999999999999999999876 3458999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc-CCCceEEeecccccccCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD-ERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DFGla~~~~~ 781 (955)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ ++|+||||||+||+++ +++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 99999999999997543 6899999999999999999999865 4599999999999998 789999999999976543
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCc
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPT 861 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (955)
. ......||+.|+|||.+. +.++.++||||||+++|||++|+.||.................. +.
T Consensus 185 ~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------~~ 249 (290)
T 1t4h_A 185 S----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----------PA 249 (290)
T ss_dssp T----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----------CG
T ss_pred c----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC----------cc
Confidence 2 223456999999999876 56999999999999999999999999765554443332222111 00
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 862 IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 862 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........++.+++.+||+.||.+|||++|++++
T Consensus 250 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 ---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0111122578899999999999999999999864
No 193
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=341.82 Aligned_cols=253 Identities=22% Similarity=0.315 Sum_probs=201.6
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC----cchhHHHHHHHHHHHhccCCCcceEEEEEE--eCCe
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS----MQGGQEFKMEIELLSRVHHKNLVSLLGFCF--DRGE 698 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~ 698 (955)
..++|...+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++. +.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3568999999999999999999964 68999999987532 234567999999999999999999999985 3457
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.++||||++++ |.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 666665544557999999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhhCC--CCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhh
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMTQQ--LTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYE 856 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (955)
..............||+.|+|||++.+.. ++.++||||||+++|||++|+.||..... ......+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~i~~~~-------- 229 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-YKLFENIGKGS-------- 229 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHCC--------
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHHHhcCC--------
Confidence 65433333344567999999999998644 37799999999999999999999975432 22222211110
Q ss_pred ccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 LIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
... .......+.+++.+||+.||.+||+++|++++
T Consensus 230 ---~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 ---YAI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---CCC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---CCC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011 11233678899999999999999999999986
No 194
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.4e-37 Score=340.65 Aligned_cols=250 Identities=26% Similarity=0.395 Sum_probs=207.5
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
+.|...+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4578889999999999999986 4689999999875432 3457899999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 102 LGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 9999999998753 5899999999999999999999998 99999999999999999999999999987654322
Q ss_pred ceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCC
Q 002189 786 HITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLS 865 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (955)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+.. ...+...
T Consensus 175 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~----------~~~~~~~-- 240 (303)
T 3a7i_A 175 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-KVLFLIPK----------NNPPTLE-- 240 (303)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHH----------SCCCCCC--
T ss_pred -ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-HHHHHhhc----------CCCCCCc--
Confidence 223456899999999999999999999999999999999999999754322 11111111 1111111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 002189 866 TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIE 900 (955)
Q Consensus 866 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 900 (955)
......+.+++.+||+.||.+||+++|++++..
T Consensus 241 --~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 241 --GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp --SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred --cccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 122367889999999999999999999998643
No 195
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=357.33 Aligned_cols=250 Identities=27% Similarity=0.366 Sum_probs=201.2
Q ss_pred cCCCccCeeeccCceEEEEEEe----CCCcEEEEEEcccCCc----chhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL----PNGQLIAIKRAQQGSM----QGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGE 698 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 698 (955)
++|...+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5688899999999999999987 3689999999875321 2335677899999999 69999999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999987543 6899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhh--CCCCChhhhHHHHHHHHHHHhCCCCCcCCc---hHHHHHHHHHhhhhhhhh
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVLMLELLTGRRPIERGK---YIVREIRTVMDKKKELYN 853 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDvwS~Gv~l~elltg~~P~~~~~---~~~~~~~~~~~~~~~~~~ 853 (955)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ............
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~------ 281 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS------ 281 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC------
T ss_pred cccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc------
Confidence 643222 22234579999999999986 347899999999999999999999996322 121211111111
Q ss_pred hhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002189 854 LYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRP-----TMSEVVKD 898 (955)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 898 (955)
.+.. .......+.+++.+||+.||.+|| +++|++++
T Consensus 282 -----~~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 282 -----EPPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp -----CCCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -----CCCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1111 112336788999999999999999 99999875
No 196
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=353.71 Aligned_cols=263 Identities=22% Similarity=0.343 Sum_probs=196.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcch-hHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQG-GQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
++|...+.||+|+||+||+|+.. +++.||||+++...... ...+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999975 78999999987543221 22456799999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 154 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc--
Confidence 97 68888876543 36899999999999999999999998 9999999999999999999999999998654322
Q ss_pred ceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh--hhhh-------
Q 002189 786 HITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL--YNLY------- 855 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~------- 855 (955)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .+....+....... ..+.
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHhchhhhcchh
Confidence 22334568999999999986 5689999999999999999999999965432 22222222211000 0000
Q ss_pred --hccCCcCCCC----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 856 --ELIDPTIGLS----TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 856 --~~~d~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
....+..... .......++.+++.+||+.||.+|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000000 001123678899999999999999999999985
No 197
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.6e-38 Score=341.95 Aligned_cols=256 Identities=23% Similarity=0.377 Sum_probs=202.5
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEe--CCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFD--RGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~l 701 (955)
.++|...+.||+|+||+||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888899999999999999875 789999999875433 234678999999999999999999998865 567899
Q ss_pred EEEecCCCCcccccCCCC--CCCCCHHHHHHHHHHHHHHHHHhhhcc--CCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 702 IYEFVPNGSLGDSLSGKN--GIRLDWIRRLKIALGAARGLSYLHELA--NPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ..+|+||||||+||++++++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999999986532 345899999999999999999999876 2449999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhc
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYEL 857 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (955)
...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+....+... .
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~i~~~-~-------- 232 (279)
T 2w5a_A 165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREG-K-------- 232 (279)
T ss_dssp HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHT-C--------
T ss_pred eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-HHHHHHHhhc-c--------
Confidence 764332 112235689999999999999999999999999999999999999975432 1222111111 1
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 002189 858 IDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDI 899 (955)
Q Consensus 858 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 899 (955)
.+.+ ......++.+++.+||+.||.+||+++|+++++
T Consensus 233 -~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 233 -FRRI----PYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp -CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred -cccC----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 0111 112336789999999999999999999999754
No 198
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.3e-38 Score=356.43 Aligned_cols=263 Identities=22% Similarity=0.323 Sum_probs=197.6
Q ss_pred HHHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeC------
Q 002189 624 KKYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR------ 696 (955)
Q Consensus 624 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 696 (955)
+...++|...+.||+|+||+||+|+. .+|+.||||++..... ...+|+++++.++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999986 5789999999875432 234799999999999999999998543
Q ss_pred --------------------------------CeEEEEEEecCCCCcccccCC--CCCCCCCHHHHHHHHHHHHHHHHHh
Q 002189 697 --------------------------------GEQMLIYEFVPNGSLGDSLSG--KNGIRLDWIRRLKIALGAARGLSYL 742 (955)
Q Consensus 697 --------------------------------~~~~lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yL 742 (955)
...++||||++ |+|.+.+.. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 33789999997 577776653 2234789999999999999999999
Q ss_pred hhccCCCeeccCCCCccEEEc-CCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHH
Q 002189 743 HELANPPIIHRDIKSSNILLD-ERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVL 820 (955)
Q Consensus 743 H~~~~~~ivHrDlk~~NIll~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~ 820 (955)
|+.+ |+||||||+||+++ +++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||+
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9998 99999999999998 688999999999987654332 2345689999999999875 48999999999999
Q ss_pred HHHHHhCCCCCcCCchHHHHHHHHHhhhh-h----hhh----hhhccCCcCCCC-----CCHHHHHHHHHHHHHhhccCC
Q 002189 821 MLELLTGRRPIERGKYIVREIRTVMDKKK-E----LYN----LYELIDPTIGLS-----TTLKGFEKYVDLALKCVQESG 886 (955)
Q Consensus 821 l~elltg~~P~~~~~~~~~~~~~~~~~~~-~----~~~----~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~dP 886 (955)
+|||++|+.||...... +.+..++.... . +.. ..+..-|..... ........+.+++.+||+.||
T Consensus 232 l~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 232 FGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 99999999999754433 22322222110 0 000 000000111000 111234678999999999999
Q ss_pred CCCCCHHHHHHH
Q 002189 887 DDRPTMSEVVKD 898 (955)
Q Consensus 887 ~~RPs~~evl~~ 898 (955)
.+|||+.|++++
T Consensus 311 ~~R~t~~e~l~h 322 (383)
T 3eb0_A 311 DLRINPYEAMAH 322 (383)
T ss_dssp GGSCCHHHHHTS
T ss_pred hhCCCHHHHhcC
Confidence 999999999965
No 199
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=353.12 Aligned_cols=259 Identities=29% Similarity=0.447 Sum_probs=202.1
Q ss_pred HHHHHHHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEe--
Q 002189 620 FEEVKKYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFD-- 695 (955)
Q Consensus 620 ~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-- 695 (955)
+.++....++|...+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 334444567889999999999999999996 478999999987543 3356789999999999 79999999999987
Q ss_pred ----CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEe
Q 002189 696 ----RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVA 771 (955)
Q Consensus 696 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 771 (955)
.+..++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEEC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999997655557899999999999999999999998 9999999999999999999999
Q ss_pred ecccccccCCCCCcceeeeeecCCCCCCHHHhh-----hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHh
Q 002189 772 DFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMD 846 (955)
Q Consensus 772 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 846 (955)
|||++....... .......||+.|+|||++. +..++.++|||||||++|||++|+.||....... .......
T Consensus 172 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 248 (326)
T 2x7f_A 172 DFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLIPR 248 (326)
T ss_dssp CCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred eCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhc
Confidence 999998764322 1223456899999999997 5678999999999999999999999996544322 1111111
Q ss_pred hhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 847 KKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. ..+... .......+.+++.+||..||.+||+++|++++
T Consensus 249 ~----------~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 249 N----------PAPRLK---SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp S----------CCCCCS---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred C----------ccccCC---ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1 111111 11223678899999999999999999999974
No 200
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-37 Score=367.14 Aligned_cols=251 Identities=26% Similarity=0.384 Sum_probs=200.4
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|+.. +++.||||+++... ......+.+|+++++.++|||||++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456888999999999999999975 68999999987543 233567899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---CCceEEeecccccccC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---RLNAKVADFGLSKSMS 780 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DFGla~~~~ 780 (955)
||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999998886543 6899999999999999999999998 999999999999976 4559999999998765
Q ss_pred CCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
... ......||+.|+|||++. +.++.++||||+||++|||++|..||..... .+....+..... ....+
T Consensus 191 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~------~~~~~ 259 (494)
T 3lij_A 191 NQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-QEILRKVEKGKY------TFDSP 259 (494)
T ss_dssp TTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC------CCCSG
T ss_pred CCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCC------CCCch
Confidence 432 233457999999999886 5799999999999999999999999975433 222222222111 00011
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. .......+.+++.+||+.||.+|||++|++++
T Consensus 260 ~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 260 E-----WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp G-----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred h-----cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1 11223678899999999999999999999975
No 201
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.4e-38 Score=352.63 Aligned_cols=252 Identities=27% Similarity=0.453 Sum_probs=201.0
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc-chhHHHHHHHHH-HHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM-QGGQEFKMEIEL-LSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|+. .+|+.||||+++.... ....++..|..+ ++.++||||+++++++.+++..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 35678889999999999999986 5789999999976433 233455666665 77889999999999999999999999
Q ss_pred EecCCCCcccccCCC--CCCCCCHHHHHHHHHHHHHHHHHhhhc-cCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 704 EFVPNGSLGDSLSGK--NGIRLDWIRRLKIALGAARGLSYLHEL-ANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 704 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
||+++ +|.+++... ....+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99974 888877531 234799999999999999999999987 8 9999999999999999999999999998764
Q ss_pred CCCCcceeeeeecCCCCCCHHHhh----hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhh
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYYM----TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYE 856 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (955)
... ......||+.|+|||++. ...++.++|||||||++|||+||+.||.........+.......
T Consensus 206 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-------- 274 (340)
T 3an0_A 206 DSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-------- 274 (340)
T ss_dssp CHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC--------
T ss_pred ccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCC--------
Confidence 321 122346999999999975 34789999999999999999999999976444333333332211
Q ss_pred ccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 LIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+... ......++.+++.+||+.||++||+++|++++
T Consensus 275 --~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 275 --SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp --CCCCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --CCCCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111 11234678999999999999999999999985
No 202
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.9e-38 Score=368.51 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=206.6
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
.++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457888999999999999999975 78999999986542 23456799999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE---cCCCceEEeeccccccc
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---DERLNAKVADFGLSKSM 779 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DFGla~~~ 779 (955)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999887554 6899999999999999999999998 9999999999999 56789999999999877
Q ss_pred CCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 780 SDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 780 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
..... .....||+.|+|||++.+ .++.++||||+||++|||++|.+||..... .+....+..... .
T Consensus 180 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~---------~ 245 (484)
T 3nyv_A 180 EASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKY---------T 245 (484)
T ss_dssp CCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCC---------C
T ss_pred ccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCCC---------C
Confidence 54332 233569999999999865 799999999999999999999999975432 222222222111 0
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
............+.+++.+||+.||.+|||++|++++
T Consensus 246 --~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 246 --FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0011112234678899999999999999999999986
No 203
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-37 Score=359.89 Aligned_cols=261 Identities=20% Similarity=0.225 Sum_probs=203.1
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhc------cCCCcceEEEEEEeCCeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRV------HHKNLVSLLGFCFDRGEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~ 699 (955)
..+|...+.||+|+||+||+|+.. +++.||||+++... ...+.+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 346888999999999999999864 58999999997532 2345678899998888 467999999999999999
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc--eEEeeccccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN--AKVADFGLSK 777 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~--~kl~DFGla~ 777 (955)
++||||++ ++|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 69999887665556999999999999999999999998 999999999999999987 9999999997
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh----h--
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE----L-- 851 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~----~-- 851 (955)
...... ....||+.|+|||++.+..++.++|||||||++|||+||.+||..... .+.+..+...... .
T Consensus 251 ~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~ 324 (429)
T 3kvw_A 251 YEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMPSQKLLD 324 (429)
T ss_dssp ETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHH
T ss_pred ecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHH
Confidence 654322 235689999999999999999999999999999999999999965433 2233222221000 0
Q ss_pred --hhhhhccCCc------------------------------CCCCCC------HHHHHHHHHHHHHhhccCCCCCCCHH
Q 002189 852 --YNLYELIDPT------------------------------IGLSTT------LKGFEKYVDLALKCVQESGDDRPTMS 893 (955)
Q Consensus 852 --~~~~~~~d~~------------------------------l~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~ 893 (955)
......++.. ...... ......+.+|+.+||+.||++|||++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~ 404 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404 (429)
T ss_dssp TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence 0000000000 000000 01135688999999999999999999
Q ss_pred HHHHH
Q 002189 894 EVVKD 898 (955)
Q Consensus 894 evl~~ 898 (955)
|++++
T Consensus 405 e~L~H 409 (429)
T 3kvw_A 405 QALRH 409 (429)
T ss_dssp HHHTS
T ss_pred HHhCC
Confidence 99975
No 204
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.7e-38 Score=347.91 Aligned_cols=262 Identities=26% Similarity=0.388 Sum_probs=187.9
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 46788999999999999999985 468999999987543 2334678899999999999999999999999999999999
Q ss_pred ecCCCCcccccCC------CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 705 FVPNGSLGDSLSG------KNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 705 ~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
|+++|+|.+++.. .....+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999998863 12346899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCC---cceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhh
Q 002189 779 MSDSEK---DHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNL 854 (955)
Q Consensus 779 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 854 (955)
...... ........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........... ....... ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~--~~ 247 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQNDPP--SL 247 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHTSSCC--CT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-HhccCCC--cc
Confidence 643321 112234579999999999976 5789999999999999999999999975443222111 1111100 00
Q ss_pred hh-ccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 855 YE-LIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 855 ~~-~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.. ..++. ........+.+++.+||+.||.+||+++|++++
T Consensus 248 ~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----C----CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccch----hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 00111 111233678899999999999999999999874
No 205
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.4e-38 Score=350.54 Aligned_cols=261 Identities=21% Similarity=0.352 Sum_probs=202.0
Q ss_pred cCHHHHHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhcc--CCCcceEEEEE
Q 002189 618 FSFEEVKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVH--HKNLVSLLGFC 693 (955)
Q Consensus 618 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--H~niv~l~~~~ 693 (955)
+.++.+....++|...+.||+|+||+||+|+..+++.||||++..... ...+.+.+|++++++++ |+||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 333334444567889999999999999999988899999999875432 33467899999999997 59999999999
Q ss_pred EeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeec
Q 002189 694 FDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADF 773 (955)
Q Consensus 694 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 773 (955)
.+++..++||| +.+++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||++++ +.+||+||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Df 170 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDF 170 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeec
Confidence 99999999999 56889999987543 6899999999999999999999998 999999999999975 79999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCHHHhhh-----------CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHH
Q 002189 774 GLSKSMSDSEKDHITTQVKGTMGYLDPEYYMT-----------QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIR 842 (955)
Q Consensus 774 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~ 842 (955)
|+++...............||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...........
T Consensus 171 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 250 (313)
T 3cek_A 171 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250 (313)
T ss_dssp SSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred cccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 99987654433223344579999999999875 4788899999999999999999999976544333322
Q ss_pred HHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 843 TVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 843 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.... +.............+.+++.+||+.||.+||+++|++++
T Consensus 251 ~~~~-------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIID-------------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHC-------------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHh-------------cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 2221 111111111223678899999999999999999999986
No 206
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.3e-38 Score=354.56 Aligned_cols=272 Identities=20% Similarity=0.289 Sum_probs=202.8
Q ss_pred cCHHHHHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc-----------hhHHHHHHHHHHHhccCCCc
Q 002189 618 FSFEEVKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ-----------GGQEFKMEIELLSRVHHKNL 686 (955)
Q Consensus 618 ~~~~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~ni 686 (955)
....++....++|...+.||+|+||+||+|+..+|+.||||++...... ..+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 4467888899999999999999999999999888999999998643221 12678999999999999999
Q ss_pred ceEEEEEEeC-----CeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEE
Q 002189 687 VSLLGFCFDR-----GEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNIL 761 (955)
Q Consensus 687 v~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIl 761 (955)
+++++++... ...++||||++ |+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl 166 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNIL 166 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEE
Confidence 9999998653 35799999997 6888877643 346899999999999999999999998 999999999999
Q ss_pred EcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHH
Q 002189 762 LDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVRE 840 (955)
Q Consensus 762 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~ 840 (955)
++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~ 242 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQ 242 (362)
T ss_dssp ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HH
T ss_pred EcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 9999999999999997544322 2334578999999999987 67899999999999999999999999754332 22
Q ss_pred HHHHHhhhhhh--h--------hhhhccCCcC---CC----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 841 IRTVMDKKKEL--Y--------NLYELIDPTI---GL----STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 841 ~~~~~~~~~~~--~--------~~~~~~d~~l---~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...+....... . ...+.+.... .. .........+.+++.+||+.||.+|||++|++++
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 22222111000 0 0000000000 00 0011123568899999999999999999999975
No 207
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.4e-39 Score=363.43 Aligned_cols=242 Identities=14% Similarity=0.156 Sum_probs=190.4
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccC---CcchhHHHHHHHH---HHHhccCCCcceEE-------EE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQG---SMQGGQEFKMEIE---LLSRVHHKNLVSLL-------GF 692 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~H~niv~l~-------~~ 692 (955)
.++|...+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|++ .+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677889999999999999996 56999999998743 3334577899994 55555799999998 66
Q ss_pred EEeCCe-----------------EEEEEEecCCCCcccccCCCC-----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCe
Q 002189 693 CFDRGE-----------------QMLIYEFVPNGSLGDSLSGKN-----GIRLDWIRRLKIALGAARGLSYLHELANPPI 750 (955)
Q Consensus 693 ~~~~~~-----------------~~lV~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 750 (955)
+.+.+. .++||||+ +|+|.+++.... ...+++..++.++.|+++||+|||+.+ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 665532 78999999 689999987532 123446888899999999999999998 9
Q ss_pred eccCCCCccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhC-----------CCCChhhhHHHHH
Q 002189 751 IHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQ-----------QLTEKSDVYSFGV 819 (955)
Q Consensus 751 vHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~ksDvwS~Gv 819 (955)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986432 2334567 999999999988 8999999999999
Q ss_pred HHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 820 LMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 820 ~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
++|||++|+.||...... .. ...... . ......++.+++.+||+.||++||++.|++++
T Consensus 302 il~elltg~~Pf~~~~~~-----------~~---~~~~~~-~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 302 VIYWIWCADLPITKDAAL-----------GG---SEWIFR-S-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHHSSCCC-----------------CC---SGGGGS-S-----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHHCCCCCcccccc-----------cc---hhhhhh-h-----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 999999999999542210 00 001111 0 01223678899999999999999999999964
No 208
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2e-37 Score=358.83 Aligned_cols=266 Identities=21% Similarity=0.298 Sum_probs=197.2
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEeC-----Ce
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR-----GE 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 698 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999864 68899999997532 23446789999999999999999999999776 57
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.|+||||++ |+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999995 69999887543 6899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCc--------------------ceeeeeecCCCCCCHHHhh-hCCCCChhhhHHHHHHHHHHHhCCCCC------
Q 002189 779 MSDSEKD--------------------HITTQVKGTMGYLDPEYYM-TQQLTEKSDVYSFGVLMLELLTGRRPI------ 831 (955)
Q Consensus 779 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~~-~~~~~~ksDvwS~Gv~l~elltg~~P~------ 831 (955)
....... ...+...||+.|+|||++. ...++.++||||+||++|||++|..|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6543221 1234567999999999974 567999999999999999999854443
Q ss_pred ----cCCch-----------------HHHHHHHHHhhhh-------------hhhhhhhccCCcCCCC---CCHHHHHHH
Q 002189 832 ----ERGKY-----------------IVREIRTVMDKKK-------------ELYNLYELIDPTIGLS---TTLKGFEKY 874 (955)
Q Consensus 832 ----~~~~~-----------------~~~~~~~~~~~~~-------------~~~~~~~~~d~~l~~~---~~~~~~~~l 874 (955)
..+.. ..+.+..++.... ................ .......++
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 22211 1122222211000 0000001111110000 001123678
Q ss_pred HHHHHHhhccCCCCCCCHHHHHHH
Q 002189 875 VDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 875 ~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.+|+.+||+.||.+|||++|++++
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHHHHhcCCcccCCCHHHHhcC
Confidence 899999999999999999999975
No 209
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.9e-38 Score=345.89 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=199.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEEe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYEF 705 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 705 (955)
.++|...+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 457888999999999999999975 5899999999876656667899999999999999999999999999999999999
Q ss_pred cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCc
Q 002189 706 VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKD 785 (955)
Q Consensus 706 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~ 785 (955)
+++++|.+++... ...+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 171 (302)
T 2j7t_A 98 CPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-- 171 (302)
T ss_dssp CTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--
T ss_pred CCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccc--
Confidence 9999999887642 236899999999999999999999998 9999999999999999999999999976432111
Q ss_pred ceeeeeecCCCCCCHHHhh-----hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 786 HITTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 786 ~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
.......||+.|+|||++. +..++.++||||||+++|||++|+.||...... .......... .+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~----------~~ 240 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSD----------PP 240 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSC----------CC
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-HHHHHHhccC----------Cc
Confidence 1122356899999999984 567889999999999999999999999754432 2221111110 11
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.. .........+.+++.+||+.||.+|||++|++++
T Consensus 241 ~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 TL--LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CC--SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred cc--CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 1122334678999999999999999999999863
No 210
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.4e-37 Score=345.80 Aligned_cols=252 Identities=26% Similarity=0.381 Sum_probs=196.9
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--------chhHHHHHHHHHHHhccCCCcceEEEEEEeC
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--------QGGQEFKMEIELLSRVHHKNLVSLLGFCFDR 696 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 696 (955)
..++|...+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567899999999999999999864 689999999875321 1123588999999999999999999998665
Q ss_pred CeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc---eEEeec
Q 002189 697 GEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN---AKVADF 773 (955)
Q Consensus 697 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DF 773 (955)
+ .++||||+++|+|.+++.... .+++.....++.|+++||+|||+.+ |+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence 4 899999999999999887543 6899999999999999999999998 999999999999987664 999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCHHHhh---hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh
Q 002189 774 GLSKSMSDSEKDHITTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE 850 (955)
Q Consensus 774 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 850 (955)
|+++...... ......||+.|+|||++. ...++.++|||||||++|||++|..||............+.....
T Consensus 162 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~- 237 (322)
T 2ycf_A 162 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY- 237 (322)
T ss_dssp TTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC-
T ss_pred ccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc-
Confidence 9998764322 223356899999999985 467899999999999999999999999754322111111111100
Q ss_pred hhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002189 851 LYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVK 897 (955)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 897 (955)
. ..+.. .......+.+++.+||+.||++||+++|+++
T Consensus 238 -----~-~~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 -----N-FIPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -----C-CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----c-cCchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 00000 0112367889999999999999999999985
No 211
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.1e-38 Score=343.68 Aligned_cols=258 Identities=23% Similarity=0.393 Sum_probs=197.8
Q ss_pred cCCCccCeeeccCceEEEEEEeC--CCc--EEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP--NGQ--LIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQM 700 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~--~g~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 700 (955)
++|...+.||+|+||+||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++.+.+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46788899999999999999853 333 68999987542 234567899999999999999999999987654 88
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999887532 35899999999999999999999998 9999999999999999999999999998775
Q ss_pred CCCCcc-eeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhcc
Q 002189 781 DSEKDH-ITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELI 858 (955)
Q Consensus 781 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (955)
...... ......+|..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+.....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~--------- 242 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGE--------- 242 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTSCC---------
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-HHHHHHHHccCC---------
Confidence 433211 1223457788999999999999999999999999999999 9999965432 222222211110
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 002189 859 DPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQ 904 (955)
Q Consensus 859 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 904 (955)
. ..........+.+++.+||+.||++||+++++++.|+++..
T Consensus 243 ~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 243 R----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred C----CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 0 11112334778999999999999999999999999988743
No 212
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-37 Score=366.84 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=204.1
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccC--CcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQG--SMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
..++|...+.||+|+||+||+|+.. +++.||||++... .......+.+|++++++++|||||++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3567899999999999999999865 7899999998642 223356789999999999999999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc---CCCceEEeeccccccc
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD---ERLNAKVADFGLSKSM 779 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~---~~~~~kl~DFGla~~~ 779 (955)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++ .++.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999998886543 6899999999999999999999998 99999999999995 4567999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 780 SDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 780 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|..||..... .+....+..... .
T Consensus 175 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~---------~ 240 (486)
T 3mwu_A 175 QQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRVETGKY---------A 240 (486)
T ss_dssp CCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC---------C
T ss_pred CCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCC---------C
Confidence 5432 2234569999999999875 699999999999999999999999965432 222222222111 0
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. ...........+.+++.+||+.||.+|||+.|++++
T Consensus 241 ~--~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 241 F--DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp S--CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C--CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 001112234678899999999999999999999986
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2e-37 Score=336.27 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=196.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888899999999999999975 78999999986432 122457889999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999986543 5899999999999999999999999 9999999999999999999999999998765432
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTI 862 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (955)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ......+.... ...
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~-----------~~~ 230 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-PTLFKKIRGGV-----------FYI 230 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCC-----------CCC
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHhhcCc-----------ccC
Confidence 2234568999999999987765 6899999999999999999999965432 12221111110 001
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+......+.+++.+||+.||.+||+++|++++
T Consensus 231 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11123678899999999999999999999985
No 214
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.2e-37 Score=363.44 Aligned_cols=251 Identities=29% Similarity=0.383 Sum_probs=201.8
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-------------chhHHHHHHHHHHHhccCCCcceEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-------------QGGQEFKMEIELLSRVHHKNLVSLLGF 692 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~~ 692 (955)
.++|...++||+|+||+||+|+.. +++.||||+++.... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 567899999999999999999965 688999999875432 224678899999999999999999999
Q ss_pred EEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC---ceE
Q 002189 693 CFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL---NAK 769 (955)
Q Consensus 693 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~---~~k 769 (955)
+.+.+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999886543 6899999999999999999999998 99999999999998776 699
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh
Q 002189 770 VADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 770 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
|+|||+++....... .....||+.|+|||++. +.++.++||||+||++|||++|..||..... .+....+.....
T Consensus 190 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~ 264 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-QDIIKKVEKGKY 264 (504)
T ss_dssp ECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCC
T ss_pred EEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCC
Confidence 999999987654322 23456999999999986 5699999999999999999999999965432 222222222110
Q ss_pred hhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 850 ELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. .+. ........++.+++.+||+.||.+|||++|++++
T Consensus 265 ~-------~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 Y-------FDF----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C-------CCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C-------CCc----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 000 0001123678899999999999999999999976
No 215
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=342.64 Aligned_cols=252 Identities=27% Similarity=0.428 Sum_probs=202.4
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
..++|...+.||+|+||+||+|+.. +|+.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567889999999999999999875 58999999987643 34678999999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|+++|+|.+++... ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999988632 236899999999999999999999998 99999999999999999999999999987654322
Q ss_pred cceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCC
Q 002189 785 DHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGL 864 (955)
Q Consensus 785 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (955)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ....... ..+..
T Consensus 181 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~----------~~~~~-- 245 (314)
T 3com_A 181 --KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA-IFMIPTN----------PPPTF-- 245 (314)
T ss_dssp --CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHS----------CCCCC--
T ss_pred --ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcC----------CCccc--
Confidence 22345689999999999999999999999999999999999999975443221 1111110 11111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 865 STTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 865 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.........+.+++.+||+.||.+||+++|++++
T Consensus 246 ~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1122234678999999999999999999999974
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.2e-37 Score=351.29 Aligned_cols=259 Identities=23% Similarity=0.307 Sum_probs=193.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCC------e
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG------E 698 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 698 (955)
++|...+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57888999999999999999864 689999999875322 23467889999999999999999999997765 7
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.++||||++ |+|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred eEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 899999996 578777752 4889999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh-hhhhhhc
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE-LYNLYEL 857 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 857 (955)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...... .......
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHTT
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHH
Confidence 64321 2334679999999999999999999999999999999999999997554332 22222211000 0000000
Q ss_pred ----------cCCcCC------------CC----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 858 ----------IDPTIG------------LS----TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 858 ----------~d~~l~------------~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
-.+... .. .......++.+|+.+||+.||.+|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000 00 011224678999999999999999999999986
No 217
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.8e-37 Score=357.68 Aligned_cols=258 Identities=25% Similarity=0.380 Sum_probs=193.9
Q ss_pred CCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCC------eEEE
Q 002189 629 NFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG------EQML 701 (955)
Q Consensus 629 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~l 701 (955)
+|...+.||+|+||+||+|+.. +|+.||||++.... +.+.+|++++++++|||||++++++...+ ..++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 5778899999999999999975 68999999986542 22347999999999999999999986532 2579
Q ss_pred EEEecCCCCcccccCC--CCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC-CceEEeecccccc
Q 002189 702 IYEFVPNGSLGDSLSG--KNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER-LNAKVADFGLSKS 778 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DFGla~~ 778 (955)
||||+++ ++.+.+.. .....+++..+..++.|+++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999975 55554432 12347899999999999999999999988 9999999999999965 5789999999987
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh-----hhh
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK-----ELY 852 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~-----~~~ 852 (955)
+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... +.+..++.... .+.
T Consensus 207 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHH
T ss_pred cccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 654322 2335789999999999765 7999999999999999999999999754432 33333322110 000
Q ss_pred hh----hhccCCcCCCC-----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 853 NL----YELIDPTIGLS-----TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 853 ~~----~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.. .+...|.+... .......++.+|+.+||+.||.+||++.|++++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00 00000111100 111224678999999999999999999999975
No 218
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=352.18 Aligned_cols=259 Identities=25% Similarity=0.362 Sum_probs=196.7
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCC------
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRG------ 697 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 697 (955)
.++|...+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35688889999999999999986 4789999999865322 23467889999999999999999999997653
Q ss_pred eEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 698 EQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 698 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
..|+||||+ +++|.++++.. .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 88999988653 5899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh------
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE------ 850 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------ 850 (955)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+.+..+......
T Consensus 177 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 177 QADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp ECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHH
T ss_pred ccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHH
Confidence 76432 223568999999999987 6899999999999999999999999975443 2333332221100
Q ss_pred -------hhhhhhccCCcCC---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 851 -------LYNLYELIDPTIG---LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 851 -------~~~~~~~~d~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......+..... ..........+.+++.+||+.||.+|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0000000000000 00111234678999999999999999999999985
No 219
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.6e-38 Score=389.14 Aligned_cols=318 Identities=31% Similarity=0.478 Sum_probs=196.8
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCC-cccccccccccccccccCCCCCCccccCC-CCcE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTT-IGNLKKLSNLMLVGCSFSGPIPDSIGSLQ-ELVL 141 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~ 141 (955)
.+++.|+|++|.+++.+|..|..+++|++|+|++|+ +.+.+|.. |.++++|++|+|++|++++.+|..+.+++ +|++
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~ 372 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN-FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSE-EEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCc-ccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcE
Confidence 456677777777776666666666667777766665 55555544 66666666666666666666666555554 4555
Q ss_pred EEccCCCCc--------------------------CcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhcccc
Q 002189 142 LSLNSNGFS--------------------------GRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKH 195 (955)
Q Consensus 142 L~Ls~N~l~--------------------------~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~ 195 (955)
|+|++|+++ +.+|..|.++++|++|+|++|++++.+|..+ ..+++|+.
T Consensus 373 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l------~~l~~L~~ 446 (768)
T 3rgz_A 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL------GSLSKLRD 446 (768)
T ss_dssp EECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGG------GGCTTCCE
T ss_pred EEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHH------hcCCCCCE
Confidence 555554444 4444445555555555555555554444332 23445566
Q ss_pred ccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCc
Q 002189 196 FHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNK 275 (955)
Q Consensus 196 L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 275 (955)
|++++|+++|.+|..+. .+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|.++..+++|+.|+|++|+
T Consensus 447 L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 525 (768)
T 3rgz_A 447 LKLWLNMLEGEIPQELM-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525 (768)
T ss_dssp EECCSSCCCSCCCGGGG-GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCcccCcCCHHHc-CCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCc
Confidence 66666666655555433 34556666777777766666666667777777777777766667667667777777777777
Q ss_pred CcccCC-CCCCCCCCCEEECcCCCCCCCCCChh-----------------------------------------------
Q 002189 276 LTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSW----------------------------------------------- 307 (955)
Q Consensus 276 l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~----------------------------------------------- 307 (955)
+++.+| .+..+++|++|+|++|++++ .+|..
T Consensus 526 l~~~~p~~l~~l~~L~~L~Ls~N~l~g-~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (768)
T 3rgz_A 526 FSGNIPAELGDCRSLIWLDLNTNLFNG-TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 604 (768)
T ss_dssp CEEECCGGGGGCTTCCEEECCSSEEES-BCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGG
T ss_pred ccCcCCHHHcCCCCCCEEECCCCccCC-cCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhh
Confidence 766555 46666667777776666654 22322
Q ss_pred -----------------------hcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhh
Q 002189 308 -----------------------FSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLL 363 (955)
Q Consensus 308 -----------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~ 363 (955)
+..+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+. +..|+.
T Consensus 605 ~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~ 684 (768)
T 3rgz_A 605 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684 (768)
T ss_dssp GGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCE
Confidence 22345566677777777777777777777777777777777766665433 555667
Q ss_pred hcccCCccccccCCCCCCCcceeEecC
Q 002189 364 VNLQNNRISAYTERGGAPAVNLTLIDN 390 (955)
Q Consensus 364 L~L~~N~l~~~~~~~~~~~~~L~~l~n 390 (955)
|||++|++++..|..+..+++|+.++.
T Consensus 685 LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 685 LDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp EECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred EECCCCcccCcCChHHhCCCCCCEEEC
Confidence 777777777666666665555555544
No 220
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.5e-37 Score=339.79 Aligned_cols=254 Identities=23% Similarity=0.393 Sum_probs=195.7
Q ss_pred HhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEe---------
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFD--------- 695 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 695 (955)
..++|...+.||+|+||+||+|+. .+|+.||||+++.. ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 456788999999999999999996 47899999998642 2334678899999999999999999999865
Q ss_pred ----CCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEe
Q 002189 696 ----RGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVA 771 (955)
Q Consensus 696 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 771 (955)
.+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEe
Confidence 35679999999999999999753 346788999999999999999999998 9999999999999999999999
Q ss_pred ecccccccCCCCC------------cceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHH
Q 002189 772 DFGLSKSMSDSEK------------DHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIV 838 (955)
Q Consensus 772 DFGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~ 838 (955)
|||+++....... ........||+.|+|||++.+. .++.++|||||||++|||++ |+..+....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~ 235 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV 235 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH
Confidence 9999986643210 1122345699999999999864 78999999999999999998 554333222
Q ss_pred HHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 839 REIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
........ ................+.+++.+||+.||.+|||++|++++
T Consensus 236 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 NILKKLRS-----------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHS-----------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHhccc-----------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 22221111 11111122233344678899999999999999999999974
No 221
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=5e-37 Score=337.15 Aligned_cols=253 Identities=26% Similarity=0.346 Sum_probs=205.3
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc---------chhHHHHHHHHHHHhcc-CCCcceEEEEEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM---------QGGQEFKMEIELLSRVH-HKNLVSLLGFCF 694 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-H~niv~l~~~~~ 694 (955)
..++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3567889999999999999999975 689999999875431 12356789999999996 999999999999
Q ss_pred eCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecc
Q 002189 695 DRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFG 774 (955)
Q Consensus 695 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFG 774 (955)
.++..++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999987543 6899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCcceeeeeecCCCCCCHHHhh------hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhh
Q 002189 775 LSKSMSDSEKDHITTQVKGTMGYLDPEYYM------TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKK 848 (955)
Q Consensus 775 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 848 (955)
+++....... .....|++.|+|||++. ...++.++||||||+++|||++|+.||...... .....+....
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~ 245 (298)
T 1phk_A 170 FSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGN 245 (298)
T ss_dssp TCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTC
T ss_pred chhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-HHHHHHhcCC
Confidence 9987654322 23356899999999986 346889999999999999999999999654332 2222222111
Q ss_pred hhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 849 KELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 849 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. .............+.+++.+||+.||.+||+++|++++
T Consensus 246 ~-----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 246 Y-----------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp C-----------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred c-----------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 0 00111112334678999999999999999999999863
No 222
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.6e-37 Score=348.05 Aligned_cols=265 Identities=22% Similarity=0.358 Sum_probs=199.9
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEe--------C
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFD--------R 696 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------~ 696 (955)
++|...+.||+|+||+||+|+. .+|+.||||++...... ....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688899999999999999997 57899999998654322 24578899999999999999999999987 3
Q ss_pred CeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccc
Q 002189 697 GEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLS 776 (955)
Q Consensus 697 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla 776 (955)
+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 468999999974 7766665432 36899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCC--cceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhh-h
Q 002189 777 KSMSDSEK--DHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKEL-Y 852 (955)
Q Consensus 777 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~ 852 (955)
+.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+....... .
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCh
Confidence 87653221 122234568999999999986 45899999999999999999999999754332 2222222111000 0
Q ss_pred ---------hhhhccCCcCCCCCCH-H------HHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 853 ---------NLYELIDPTIGLSTTL-K------GFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 853 ---------~~~~~~d~~l~~~~~~-~------~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...+.+.......... . ....+.+++.+||+.||.+|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000000000000000 0 02457899999999999999999999985
No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3e-37 Score=349.14 Aligned_cols=258 Identities=24% Similarity=0.378 Sum_probs=184.8
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEeC------Ce
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDR------GE 698 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~ 698 (955)
++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5788899999999999999985 478999999987532 23346788999999999999999999998754 56
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.++|+||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CEEEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEEEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 79999999 78999988753 6899999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh-------
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE------- 850 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------- 850 (955)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .+.+..+......
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHT
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHH
Confidence 5432 234579999999999987 6789999999999999999999999965443 2333332221100
Q ss_pred ------hhhhhhccCCcCCCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 851 ------LYNLYELIDPTIGLS---TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 851 ------~~~~~~~~d~~l~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......+....... ........+.+|+.+||+.||.+|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000000000000 001123568899999999999999999999975
No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.9e-37 Score=342.03 Aligned_cols=261 Identities=20% Similarity=0.293 Sum_probs=205.0
Q ss_pred hcCCCccCeeeccCceEEEEEEe--CCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCC------cceEEEEEEeCCe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL--PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKN------LVSLLGFCFDRGE 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~ 698 (955)
.++|...+.||+|+||+||+|.. .+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35788899999999999999986 36889999998753 233467889999999997665 9999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC--------------
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE-------------- 764 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~-------------- 764 (955)
.++||||+ +++|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 899999987766567899999999999999999999998 999999999999987
Q ss_pred -----CCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHH
Q 002189 765 -----RLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVR 839 (955)
Q Consensus 765 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~ 839 (955)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|..||.......
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred cccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 6689999999998754322 23568999999999999999999999999999999999999997543321
Q ss_pred HHHHHHhhhhhhh-hh---------------------------hhccCCcC-CCCCCHHHHHHHHHHHHHhhccCCCCCC
Q 002189 840 EIRTVMDKKKELY-NL---------------------------YELIDPTI-GLSTTLKGFEKYVDLALKCVQESGDDRP 890 (955)
Q Consensus 840 ~~~~~~~~~~~~~-~~---------------------------~~~~d~~l-~~~~~~~~~~~l~~li~~cl~~dP~~RP 890 (955)
............. .+ .....+.. ..........++.+++.+||+.||.+||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 1111111000000 00 00000000 0112234567899999999999999999
Q ss_pred CHHHHHHH
Q 002189 891 TMSEVVKD 898 (955)
Q Consensus 891 s~~evl~~ 898 (955)
|++|++++
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999864
No 225
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.4e-37 Score=373.69 Aligned_cols=259 Identities=25% Similarity=0.371 Sum_probs=207.1
Q ss_pred hcCCCccCeeeccCceEEEEEEeC----CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP----NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 701 (955)
.++|...+.||+|+||+||+|++. .+..||||+++.... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 456788899999999999999864 256899999876433 23467999999999999999999999984 567899
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCC
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSD 781 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~ 781 (955)
||||+++|+|.++++.. ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 468 v~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999998754 346899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 782 SEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 782 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... .+....+.... .+
T Consensus 544 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-~~~~~~i~~~~----------~~ 611 (656)
T 2j0j_A 544 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGE----------RL 611 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHHTC----------CC
T ss_pred Ccc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHcCC----------CC
Confidence 332 22233457789999999999999999999999999999997 8999865432 22222221111 01
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHc
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQA 906 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 906 (955)
. .+......+.+++.+||+.||.+||+++|+++.|+++++..
T Consensus 612 ~----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 612 P----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred C----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1 11223467899999999999999999999999999998654
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.4e-37 Score=342.18 Aligned_cols=265 Identities=23% Similarity=0.313 Sum_probs=204.2
Q ss_pred HhcCCCccCeeeccCceEEEEEEe--CCCcEEEEEEcccCCc--chhHHHHHHHHHHHhc---cCCCcceEEEEEE----
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTL--PNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRV---HHKNLVSLLGFCF---- 694 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~---- 694 (955)
+.++|...+.||+|+||+||+|+. .+|+.||||+++.... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 356789999999999999999997 4688999999864322 2224567788887777 7999999999997
Q ss_pred -eCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeec
Q 002189 695 -DRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADF 773 (955)
Q Consensus 695 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 773 (955)
.....++||||++ |+|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999997 69999887655556899999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh--h
Q 002189 774 GLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE--L 851 (955)
Q Consensus 774 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~--~ 851 (955)
|+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... +....+...... .
T Consensus 165 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCG
T ss_pred cccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCc
Confidence 9998654321 223456899999999999999999999999999999999999999755432 223333221110 0
Q ss_pred hhhhh-------ccC---CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 852 YNLYE-------LID---PTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 852 ~~~~~-------~~d---~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..+.. ... ..............+.+++.+||+.||.+||+++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 000 000001112234678899999999999999999999864
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.5e-37 Score=355.28 Aligned_cols=260 Identities=25% Similarity=0.352 Sum_probs=194.6
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCe------EEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE------QML 701 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~l 701 (955)
.+|...+.||+|+||+||+|+..++..||+|++..... ...+|+++++.++||||+++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 45788899999999999999987777799998865322 22469999999999999999999976543 789
Q ss_pred EEEecCCCCcccccC-CCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc-CCCceEEeeccccccc
Q 002189 702 IYEFVPNGSLGDSLS-GKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD-ERLNAKVADFGLSKSM 779 (955)
Q Consensus 702 V~e~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DFGla~~~ 779 (955)
||||++++.+..... ......+++..+..++.|+++||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999997654333221 111346899999999999999999999998 99999999999999 7999999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh-----hhh-
Q 002189 780 SDSEKDHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK-----ELY- 852 (955)
Q Consensus 780 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~-----~~~- 852 (955)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... +.+..+..... ...
T Consensus 193 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHH
T ss_pred cCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 44332 2335689999999999765 5899999999999999999999999754432 22222222100 000
Q ss_pred ---hhhhccCCcCCCC-----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 853 ---NLYELIDPTIGLS-----TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 853 ---~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...+..-|..... .......++.+++.+||+.||.+|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000000111000 111234678999999999999999999999975
No 228
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.2e-37 Score=346.64 Aligned_cols=269 Identities=23% Similarity=0.326 Sum_probs=192.7
Q ss_pred HHHHHHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEeCCe-
Q 002189 621 EEVKKYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE- 698 (955)
Q Consensus 621 ~el~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 698 (955)
.+.....++|...+.||+|+||+||+|+.. +|+.||||++..... ....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667889999999999999999999974 689999999865432 23456778889999999999999999977544
Q ss_pred ------EEEEEEecCCCCcccccCC--CCCCCCCHHHHHHHHHHHHHHHHHhh--hccCCCeeccCCCCccEEEcC-CCc
Q 002189 699 ------QMLIYEFVPNGSLGDSLSG--KNGIRLDWIRRLKIALGAARGLSYLH--ELANPPIIHRDIKSSNILLDE-RLN 767 (955)
Q Consensus 699 ------~~lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDlk~~NIll~~-~~~ 767 (955)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| +.+ |+||||||+||+++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence 7899999976 44433321 12346889999999999999999999 777 999999999999997 899
Q ss_pred eEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCC-CCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHh
Q 002189 768 AKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQ-LTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMD 846 (955)
Q Consensus 768 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 846 (955)
+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ..+..+..
T Consensus 171 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~ 246 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVR 246 (360)
T ss_dssp EEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH
T ss_pred EEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHH
Confidence 99999999987654332 22356899999999997654 899999999999999999999999754432 22222221
Q ss_pred hhh-hhhhhhhccCCcC----------------CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 847 KKK-ELYNLYELIDPTI----------------GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 847 ~~~-~~~~~~~~~d~~l----------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
... ........+++.. ..........++.+++.+||+.||.+|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 100 0000011111100 001112245789999999999999999999999975
No 229
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.7e-37 Score=377.46 Aligned_cols=250 Identities=23% Similarity=0.287 Sum_probs=206.4
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC---cchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEE
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQM 700 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 700 (955)
..++|...++||+|+||+||+|+.. +++.||||+++... ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467899999999999999999965 68899999987531 22345678899999988 7999999999999999999
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
|||||+++|+|.++++..+ .+++..+..++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999997654 6899999999999999999999998 9999999999999999999999999998643
Q ss_pred CCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCC
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDP 860 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (955)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 494 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-~~~~~~~i~~~~~----------- 559 (674)
T 3pfq_A 494 WDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSIMEHNV----------- 559 (674)
T ss_dssp CTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHSSCC-----------
T ss_pred cCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-HHHHHHHHHhCCC-----------
Confidence 322 22345689999999999999999999999999999999999999997543 2233333322110
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHHH
Q 002189 861 TIGLSTTLKGFEKYVDLALKCVQESGDDRPTM-----SEVVKD 898 (955)
Q Consensus 861 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 898 (955)
. .+.....++.+|+.+||+.||.+||++ +||+++
T Consensus 560 ~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 560 A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp C----CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred C----CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1 111233678999999999999999997 777764
No 230
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.6e-38 Score=356.27 Aligned_cols=254 Identities=9% Similarity=-0.002 Sum_probs=183.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc---hhHHHHHHHHHHHhc--cCCCcceEE-------EEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ---GGQEFKMEIELLSRV--HHKNLVSLL-------GFCF 694 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~ 694 (955)
..|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 34778899999999999999964 7899999999875432 235677886555555 599988755 4554
Q ss_pred eC-----------------CeEEEEEEecCCCCcccccCCCCCCCCCHHHH------HHHHHHHHHHHHHhhhccCCCee
Q 002189 695 DR-----------------GEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRR------LKIALGAARGLSYLHELANPPII 751 (955)
Q Consensus 695 ~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~iv 751 (955)
.. ...++||||++ |+|.+++...+. .+.+..+ ..++.|+++||+|||+.+ |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 33 23799999998 899999875421 3355555 788899999999999998 99
Q ss_pred ccCCCCccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhh--CCCCChhhhHHHHHHHHHHHhCCC
Q 002189 752 HRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVLMLELLTGRR 829 (955)
Q Consensus 752 HrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDvwS~Gv~l~elltg~~ 829 (955)
||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999876421 113457799999999987 789999999999999999999999
Q ss_pred CCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 830 PIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 830 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
||........ ...........................+.+++.+||+.||++||+++|++++
T Consensus 292 Pf~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 292 PFGLVTPGIK-------GSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp STTBCCTTCT-------TCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCcCcccc-------cchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 9975421100 0000000001111111111122345788999999999999999999999864
No 231
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.6e-37 Score=346.00 Aligned_cols=264 Identities=22% Similarity=0.308 Sum_probs=200.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc-hhHHHHHHHHHHHhccCCCcceEEEEEEeC-----CeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ-GGQEFKMEIELLSRVHHKNLVSLLGFCFDR-----GEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 699 (955)
.++|...+.||+|+||+||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457889999999999999999864 6889999999754332 336788999999999999999999999765 368
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999996 6898888643 5899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCc-ceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh-------
Q 002189 780 SDSEKD-HITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE------- 850 (955)
Q Consensus 780 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------- 850 (955)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+..+......
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH
Confidence 532211 112345799999999997754 58999999999999999999999997543221 11111110000
Q ss_pred ------hhhhhhccCCcCCCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 851 ------LYNLYELIDPTIGLS---TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 851 ------~~~~~~~~d~~l~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
............... .......++.+++.+||+.||.+|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000000 001123678899999999999999999999975
No 232
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.1e-37 Score=352.04 Aligned_cols=262 Identities=21% Similarity=0.242 Sum_probs=202.1
Q ss_pred hcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc--------CCCcceEEEEEE---
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH--------HKNLVSLLGFCF--- 694 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~--- 694 (955)
.++|...++||+|+||+||+|+. .+++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36789999999999999999985 46899999999753 233467889999999996 788999999988
Q ss_pred -eCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-cCCCeeccCCCCccEEEcCCC------
Q 002189 695 -DRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL-ANPPIIHRDIKSSNILLDERL------ 766 (955)
Q Consensus 695 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NIll~~~~------ 766 (955)
.....++||||+ +++|.+++.......+++..+..++.|+++||+|||+. + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhh
Confidence 456789999999 66777766554445799999999999999999999997 8 99999999999999775
Q ss_pred -------------------------------------------ceEEeecccccccCCCCCcceeeeeecCCCCCCHHHh
Q 002189 767 -------------------------------------------NAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYY 803 (955)
Q Consensus 767 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 803 (955)
.+||+|||+++..... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999876432 2234689999999999
Q ss_pred hhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch-----HHHHHHHHHhhhhhhh-------hh-hhccCC--cC------
Q 002189 804 MTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY-----IVREIRTVMDKKKELY-------NL-YELIDP--TI------ 862 (955)
Q Consensus 804 ~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~-----~~~~~~~~~~~~~~~~-------~~-~~~~d~--~l------ 862 (955)
.+..++.++|||||||++|||+||+.||..... ..+.+........... .. .+.... ..
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999974221 1122221111100000 00 000000 00
Q ss_pred -----------CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 863 -----------GLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 863 -----------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...........+.+|+.+||+.||++|||++|++++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 012245566789999999999999999999999864
No 233
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=347.83 Aligned_cols=260 Identities=22% Similarity=0.365 Sum_probs=199.9
Q ss_pred hcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--chhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
.++|...+.||+|+||+||+|+..+ .||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4578888999999999999998753 499999875322 223567889999999999999999999999999999999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCC
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEK 784 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~ 784 (955)
|+++++|.+++.... ..+++..++.++.|+++||+|||+.+ ++||||||+||+++ ++.+||+|||+++.......
T Consensus 110 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 999999999997643 46899999999999999999999998 99999999999998 67999999999876532111
Q ss_pred ---cceeeeeecCCCCCCHHHhhh---------CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhh
Q 002189 785 ---DHITTQVKGTMGYLDPEYYMT---------QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELY 852 (955)
Q Consensus 785 ---~~~~~~~~gt~~y~aPE~~~~---------~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 852 (955)
........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... .........
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~----- 258 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTG----- 258 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTT-----
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhccC-----
Confidence 112233468999999999974 35788999999999999999999999754322 111111111
Q ss_pred hhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHcC
Q 002189 853 NLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQAG 907 (955)
Q Consensus 853 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 907 (955)
..+.... ......+.+++.+||+.||.+||+++|+++.|+++.++..
T Consensus 259 -----~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 259 -----MKPNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp -----CCCCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred -----CCCCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1111111 1122467899999999999999999999999998876643
No 234
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=339.31 Aligned_cols=263 Identities=22% Similarity=0.328 Sum_probs=195.9
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEE------------
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCF------------ 694 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~------------ 694 (955)
++|...+.||+|+||+||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57888999999999999999975 58999999998766556678999999999999999999999873
Q ss_pred --eCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc-CCCceEEe
Q 002189 695 --DRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD-ERLNAKVA 771 (955)
Q Consensus 695 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~-~~~~~kl~ 771 (955)
+.+..++||||++ |+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++ +++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 6999988643 5899999999999999999999998 99999999999997 56799999
Q ss_pred ecccccccCCCCC-cceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhh
Q 002189 772 DFGLSKSMSDSEK-DHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKK 849 (955)
Q Consensus 772 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 849 (955)
|||+++....... ........+|..|+|||.+.+ ..++.++||||||+++|||++|+.||...... +....+.....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcC
Confidence 9999987643211 111223457999999999875 67899999999999999999999999755432 22222222110
Q ss_pred h-----hhhhhh---------ccCCcCC-CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 850 E-----LYNLYE---------LIDPTIG-LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 850 ~-----~~~~~~---------~~d~~l~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. ...+.. ...+... .........++.+++.+||+.||++||+++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 000000 0000000 00001234678999999999999999999999985
No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-36 Score=343.77 Aligned_cols=264 Identities=22% Similarity=0.305 Sum_probs=202.8
Q ss_pred HhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-CC-----CcceEEEEEEeCCe
Q 002189 626 YTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-HK-----NLVSLLGFCFDRGE 698 (955)
Q Consensus 626 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~ 698 (955)
..++|...+.||+|+||+||+|+.. +++.||||+++.. ....+++.+|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999865 6889999999753 223466788999999885 55 49999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc--CCCceEEeecccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD--ERLNAKVADFGLS 776 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~--~~~~~kl~DFGla 776 (955)
.++||||++ |+|.+++.......+++..+..++.|++.||+|||.+ ...|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999995 6999998766545689999999999999999999952 12399999999999994 5788999999999
Q ss_pred cccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh------
Q 002189 777 KSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE------ 850 (955)
Q Consensus 777 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------ 850 (955)
+...... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...... +.+..+......
T Consensus 209 ~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 282 (382)
T 2vx3_A 209 CQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV-DQMNKIVEVLGIPPAHIL 282 (382)
T ss_dssp EETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred eeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 8764322 2356899999999999999999999999999999999999999754332 223322221100
Q ss_pred -----hhhhhhcc-C-----------------CcC--------------------CCCCCHHHHHHHHHHHHHhhccCCC
Q 002189 851 -----LYNLYELI-D-----------------PTI--------------------GLSTTLKGFEKYVDLALKCVQESGD 887 (955)
Q Consensus 851 -----~~~~~~~~-d-----------------~~l--------------------~~~~~~~~~~~l~~li~~cl~~dP~ 887 (955)
.......+ + +.. ..........++.+|+.+||+.||+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 362 (382)
T 2vx3_A 283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPK 362 (382)
T ss_dssp TTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTT
T ss_pred HhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChh
Confidence 00000000 0 000 0001123345789999999999999
Q ss_pred CCCCHHHHHHH
Q 002189 888 DRPTMSEVVKD 898 (955)
Q Consensus 888 ~RPs~~evl~~ 898 (955)
+|||++|++++
T Consensus 363 ~Rpta~e~L~h 373 (382)
T 2vx3_A 363 TRIQPYYALQH 373 (382)
T ss_dssp TSCCHHHHTTS
T ss_pred hCCCHHHHhcC
Confidence 99999999864
No 236
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=349.58 Aligned_cols=264 Identities=22% Similarity=0.294 Sum_probs=183.0
Q ss_pred CCCc-cCeeeccCceEEEEEEeC---CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEe--CCeEEEE
Q 002189 629 NFSD-ANDVGSGGYGKVYKGTLP---NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFD--RGEQMLI 702 (955)
Q Consensus 629 ~f~~-~~~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV 702 (955)
.|.. .++||+|+||+||+|+.. +++.||||+++.... .+.+.+|++++++++|||||++++++.. ....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3444 457999999999999965 578999999975433 3568899999999999999999999965 6688999
Q ss_pred EEecCCCCcccccCCC-------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE----cCCCceEEe
Q 002189 703 YEFVPNGSLGDSLSGK-------NGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL----DERLNAKVA 771 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll----~~~~~~kl~ 771 (955)
|||++ |+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99996 5777766421 1235899999999999999999999998 9999999999999 778999999
Q ss_pred ecccccccCCCCC-cceeeeeecCCCCCCHHHhhhC-CCCChhhhHHHHHHHHHHHhCCCCCcCCchH--------HHHH
Q 002189 772 DFGLSKSMSDSEK-DHITTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVLMLELLTGRRPIERGKYI--------VREI 841 (955)
Q Consensus 772 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~--------~~~~ 841 (955)
|||+++....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .+.+
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999987653221 1223346799999999999874 5899999999999999999999999643221 1222
Q ss_pred HHHHhhhhh-----hhhh---------hhccCCc-CCCCC--------CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 842 RTVMDKKKE-----LYNL---------YELIDPT-IGLST--------TLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 842 ~~~~~~~~~-----~~~~---------~~~~d~~-l~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..++..... +..+ ...+... ..... .......+.+|+.+||+.||.+|||++|++++
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 222211100 0000 0000000 00000 00012467899999999999999999999986
No 237
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.8e-36 Score=343.79 Aligned_cols=258 Identities=22% Similarity=0.355 Sum_probs=197.5
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeE----
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQ---- 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~---- 699 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888899999999999999864 6899999999764332 246788999999999999999999999877654
Q ss_pred --EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 700 --MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 700 --~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 688777743 4899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh------
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE------ 850 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------ 850 (955)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.+..+......
T Consensus 193 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 193 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred ccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHH
Confidence 65432 233568999999999987 78999999999999999999999999754432 222222221100
Q ss_pred -------hhhhhhccCCcCCCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 851 -------LYNLYELIDPTIGLS---TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 851 -------~~~~~~~~d~~l~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......+....... ........+.+|+.+||+.||++|||++|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000011000000 001123678999999999999999999999975
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=339.36 Aligned_cols=257 Identities=22% Similarity=0.358 Sum_probs=197.6
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEeCCe------
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE------ 698 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 698 (955)
++|...+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46788899999999999999864 6899999998754322 24678899999999999999999999987654
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
.++||||++ |+|.+++.. .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 688887753 4899999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCCcceeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh-------
Q 002189 779 MSDSEKDHITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE------- 850 (955)
Q Consensus 779 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~------- 850 (955)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.+..+......
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 5422 234568999999999987 67899999999999999999999999754432 222222211000
Q ss_pred ------hhhhhhccCCcCC---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 851 ------LYNLYELIDPTIG---LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 851 ------~~~~~~~~d~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.......+..... ..........+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000110000 01112334788999999999999999999999875
No 239
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.1e-36 Score=330.54 Aligned_cols=254 Identities=26% Similarity=0.364 Sum_probs=204.6
Q ss_pred HHHhcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCC--cchhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEE
Q 002189 624 KKYTNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGS--MQGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQM 700 (955)
Q Consensus 624 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 700 (955)
....++|...+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 345678999999999999999999975 78999999986532 234567899999999999999999999999999999
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC---CceEEeeccccc
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER---LNAKVADFGLSK 777 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~---~~~kl~DFGla~ 777 (955)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.+ +.+||+|||+++
T Consensus 98 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 9999999999998876543 6899999999999999999999998 9999999999999754 469999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhc
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYEL 857 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (955)
....... .....||+.|+|||.+.+ .++.++||||||+++|||++|..||..... .+....+.....
T Consensus 173 ~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~-------- 239 (287)
T 2wei_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRVETGKY-------- 239 (287)
T ss_dssp TBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCC--------
T ss_pred eecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCC--------
Confidence 7654322 223458999999998875 589999999999999999999999975432 222222211110
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 858 IDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 858 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.... ........++.+++.+||+.||++||+++|++++
T Consensus 240 -~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 240 -AFDL--PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp -CCCS--GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -CCCc--hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0000 0011223678899999999999999999999985
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.2e-37 Score=342.66 Aligned_cols=254 Identities=28% Similarity=0.421 Sum_probs=179.4
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-chhHHHHHHHH-HHHhccCCCcceEEEEEEeCCeEEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-QGGQEFKMEIE-LLSRVHHKNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~e 704 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++.... ...+++..|+. +++.++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 56788899999999999999974 789999999976433 23345566665 6777899999999999999999999999
Q ss_pred ecCCCCcccccCC---CCCCCCCHHHHHHHHHHHHHHHHHhhhc-cCCCeeccCCCCccEEEcCCCceEEeecccccccC
Q 002189 705 FVPNGSLGDSLSG---KNGIRLDWIRRLKIALGAARGLSYLHEL-ANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMS 780 (955)
Q Consensus 705 ~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~ 780 (955)
|+++ +|.+++.. .....+++..+..++.|+++||.|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9974 77776642 1234689999999999999999999998 8 9999999999999999999999999998764
Q ss_pred CCCCcceeeeeecCCCCCCHHHh----hhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhh
Q 002189 781 DSEKDHITTQVKGTMGYLDPEYY----MTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYE 856 (955)
Q Consensus 781 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (955)
... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......+.... ...
T Consensus 178 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----------~~~ 244 (327)
T 3aln_A 178 DSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ----------VVK 244 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CC----------CCC
T ss_pred ccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHH----------Hhc
Confidence 332 12334699999999998 4567899999999999999999999999754322111110 111
Q ss_pred ccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 LIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
...+.+...........+.+++.+||+.||++||+++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111222221222344688999999999999999999999875
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.5e-36 Score=337.87 Aligned_cols=262 Identities=19% Similarity=0.276 Sum_probs=202.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CC-cEEEEEEcccCCcchhHHHHHHHHHHHhccCCC------cceEEEEEEeCCe
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NG-QLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKN------LVSLLGFCFDRGE 698 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~ 698 (955)
.++|...+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 367889999999999999999864 34 78999999753 233467889999999998766 9999999999999
Q ss_pred EEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEE----------------
Q 002189 699 QMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILL---------------- 762 (955)
Q Consensus 699 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll---------------- 762 (955)
.++||||+ ++++.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 677777776555457999999999999999999999998 9999999999999
Q ss_pred ---cCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHH
Q 002189 763 ---DERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVR 839 (955)
Q Consensus 763 ---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~ 839 (955)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 678899999999998654322 235699999999999999999999999999999999999999975443221
Q ss_pred --HHHHHHhhhhh-hh------------------------hhhhccCCc-CCCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 002189 840 --EIRTVMDKKKE-LY------------------------NLYELIDPT-IGLSTTLKGFEKYVDLALKCVQESGDDRPT 891 (955)
Q Consensus 840 --~~~~~~~~~~~-~~------------------------~~~~~~d~~-l~~~~~~~~~~~l~~li~~cl~~dP~~RPs 891 (955)
.+......... .. ...+...+. ...........++.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 327 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT 327 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence 11111100000 00 000000000 001112234568899999999999999999
Q ss_pred HHHHHHH
Q 002189 892 MSEVVKD 898 (955)
Q Consensus 892 ~~evl~~ 898 (955)
++|++++
T Consensus 328 ~~e~l~h 334 (355)
T 2eu9_A 328 LAEALLH 334 (355)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999864
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-36 Score=340.22 Aligned_cols=251 Identities=19% Similarity=0.229 Sum_probs=175.5
Q ss_pred hcCCCccC-eeeccCceEEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCcceEEEEEEe----CCeEE
Q 002189 627 TNNFSDAN-DVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNLVSLLGFCFD----RGEQM 700 (955)
Q Consensus 627 ~~~f~~~~-~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~ 700 (955)
.++|...+ .||+|+||+||+|+.. +|+.||||++... .+...+....++.++||||+++++++.. +...+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 46777755 6999999999999875 6899999998653 1222223344666789999999999976 44589
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---CCceEEeeccccc
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---RLNAKVADFGLSK 777 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DFGla~ 777 (955)
+||||+++|+|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998766667999999999999999999999998 999999999999976 4559999999998
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHH--HHHHHHhhhhhhhhhh
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVR--EIRTVMDKKKELYNLY 855 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~ 855 (955)
...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||........ .........
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------- 248 (336)
T 3fhr_A 180 ETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG------- 248 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc-------
Confidence 664322 2345689999999999888899999999999999999999999964322110 000000000
Q ss_pred hccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 856 ELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 856 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
..............++.+++.+||+.||.+|||++|++++
T Consensus 249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 ---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001111112334678999999999999999999999986
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=334.88 Aligned_cols=252 Identities=23% Similarity=0.382 Sum_probs=182.7
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcch-h-HHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQG-G-QEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++...... . +.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356788899999999999999975 78999999997653322 2 33445556788889999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-cCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL-ANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
||+ ++.+..+.. .....+++..+..++.|+++||+|||+. + ++||||||+||+++.++.+||+|||+++.....
T Consensus 104 e~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 444443332 2234689999999999999999999985 8 999999999999999999999999999766433
Q ss_pred CCcceeeeeecCCCCCCHHHhh-----hCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhc
Q 002189 783 EKDHITTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYEL 857 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (955)
. ......||+.|+|||++. ...++.++||||||+++|||++|+.||.......+..........
T Consensus 179 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------- 247 (318)
T 2dyl_A 179 K---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-------- 247 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC--------
T ss_pred c---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC--------
Confidence 2 223456999999999994 567899999999999999999999999765444443333332211
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 858 IDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 858 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+.... .......+.+++.+||+.||.+||+++|++++
T Consensus 248 --~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 --PLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --CCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --CCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11110 11233678899999999999999999999974
No 244
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.3e-36 Score=340.33 Aligned_cols=263 Identities=23% Similarity=0.323 Sum_probs=200.0
Q ss_pred hcCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeC-----CeE
Q 002189 627 TNNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDR-----GEQ 699 (955)
Q Consensus 627 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 699 (955)
.++|...+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 457888999999999999999965 689999999975433 2345788999999999999999999998764 678
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
++||||++ |+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 6898887653 5899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCcc--------eeeeeecCCCCCCHHHhhh-CCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhh
Q 002189 780 SDSEKDH--------ITTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKE 850 (955)
Q Consensus 780 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 850 (955)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +....+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR-HQLLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCC
Confidence 5322111 1123468999999999875 67899999999999999999999999754432 222222111000
Q ss_pred h--------------hhhhhccCCcCCCC----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 851 L--------------YNLYELIDPTIGLS----TTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 851 ~--------------~~~~~~~d~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
. ......+ +..... .......++.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSL-PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTS-CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcc-cCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0000000 000000 001233678899999999999999999999975
No 245
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=336.53 Aligned_cols=245 Identities=26% Similarity=0.408 Sum_probs=193.2
Q ss_pred HHHHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc------hhHHHHHHHHHHHhc----cCCCcceEEE
Q 002189 623 VKKYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ------GGQEFKMEIELLSRV----HHKNLVSLLG 691 (955)
Q Consensus 623 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~~ 691 (955)
.....++|...+.||+|+||+||+|+. .+++.||||+++..... ....+.+|++++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 345567899999999999999999986 47899999999754332 223456799999999 8999999999
Q ss_pred EEEeCCeEEEEEEe-cCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc-CCCceE
Q 002189 692 FCFDRGEQMLIYEF-VPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD-ERLNAK 769 (955)
Q Consensus 692 ~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~-~~~~~k 769 (955)
++.+.+..++|||| +++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++ +++.+|
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEE
Confidence 99999999999999 78999999987543 6899999999999999999999998 99999999999999 889999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCC-ChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhh
Q 002189 770 VADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLT-EKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKK 848 (955)
Q Consensus 770 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 848 (955)
|+|||+++...... .....||..|+|||++.+..+. .++||||||+++|||++|+.||...... ....
T Consensus 181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~ 249 (312)
T 2iwi_A 181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-------LEAE 249 (312)
T ss_dssp ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-------HHTC
T ss_pred EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH-------hhhc
Confidence 99999998765432 2345699999999999877765 5899999999999999999999643211 1100
Q ss_pred hhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 849 KELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 849 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.. ........+.+++.+||+.||++||+++|++++
T Consensus 250 -----------~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 250 -----------LH----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -----------CC----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----------cC----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 111223678899999999999999999999874
No 246
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.5e-36 Score=349.65 Aligned_cols=250 Identities=24% Similarity=0.301 Sum_probs=187.8
Q ss_pred CCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEEEEecCC
Q 002189 630 FSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLIYEFVPN 708 (955)
Q Consensus 630 f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 708 (955)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+++..++||||++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 4456789999999998776668999999998653 235678899999987 89999999999999999999999995
Q ss_pred CCcccccCCCCCCC-----CCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCC-------------CceEE
Q 002189 709 GSLGDSLSGKNGIR-----LDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDER-------------LNAKV 770 (955)
Q Consensus 709 gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~-------------~~~kl 770 (955)
|+|.+++....... .++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 79999987654211 123345789999999999999998 9999999999999754 48999
Q ss_pred eecccccccCCCCCcc--eeeeeecCCCCCCHHHhhh-------CCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHH
Q 002189 771 ADFGLSKSMSDSEKDH--ITTQVKGTMGYLDPEYYMT-------QQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVRE 840 (955)
Q Consensus 771 ~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~ 840 (955)
+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |..||........
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~- 248 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES- 248 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH-
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH-
Confidence 9999998775433211 1234579999999999975 678999999999999999999 8999964432211
Q ss_pred HHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002189 841 IRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVK 897 (955)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 897 (955)
.+..... . .+............++.+++.+||+.||.+||+++|+++
T Consensus 249 --~i~~~~~------~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 --NIIRGIF------S--LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHTCC------C--CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHhcCCC------C--cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111110 0 111122223455678999999999999999999999986
No 247
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.9e-36 Score=350.68 Aligned_cols=334 Identities=17% Similarity=0.129 Sum_probs=264.1
Q ss_pred CCCCCCCccEEeCC----------CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccC-CCCCcccccccccc
Q 002189 50 DPCGDNWEGIGCTN----------SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGP-LPTTIGNLKKLSNL 118 (955)
Q Consensus 50 ~~C~~~w~gv~C~~----------~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~-~p~~~~~l~~L~~L 118 (955)
+.|.|.+..|.|+. .+++.|+|++|.+++..|..|..+++|++|+|++|. +.+. .|..|.++++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~-~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQT-PGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCS-TTCEECTTTTTTCTTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCc-ccceECcccccccccCCEE
Confidence 34543444488864 468999999999999989999999999999999997 6644 46789999999999
Q ss_pred cccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCC--CCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccc
Q 002189 119 MLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPS--IGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHF 196 (955)
Q Consensus 119 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L 196 (955)
+|++|++++..|..|+++++|++|+|++|++++.++.. |.++++|++|+|++|++++..|..+ +..+++|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~~l~~L~~L 159 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF-----FLNMRRFHVL 159 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGG-----GGGCTTCCEE
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccc-----cCCCCcccEE
Confidence 99999999888999999999999999999999855544 9999999999999999996666432 5667888999
Q ss_pred cccCCcccccCCccccCC-ccceeeeeccCCCccccCCccc--------CCCCCCcEEEcccCCCCCCccccccC-----
Q 002189 197 HFGKNQLSGSIPEKLFRP-DMVLIHVLFDSNNLTGELPATL--------GLVKSLEVVRFDRNSLSGPVPSNLNN----- 262 (955)
Q Consensus 197 ~L~~N~l~g~ip~~~~~~-~~~L~~L~L~~N~l~~~~p~~l--------~~l~~L~~L~Ls~N~l~~~~p~~l~~----- 262 (955)
++++|++++..|..+... ...|+.|++++|.+.+..+..+ ..+++|++|++++|.+++..|..+..
T Consensus 160 ~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~ 239 (455)
T 3v47_A 160 DLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGT 239 (455)
T ss_dssp ECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTC
T ss_pred eCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcccccc
Confidence 999999996666554332 2567777777777776544432 35567777777777776555544322
Q ss_pred ----------------------------------CCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChh
Q 002189 263 ----------------------------------LTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSW 307 (955)
Q Consensus 263 ----------------------------------l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~ 307 (955)
.++|+.|+|++|.+++.++ .+..+++|++|+|++|++++ ..|..
T Consensus 240 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~ 318 (455)
T 3v47_A 240 KIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINK-IDDNA 318 (455)
T ss_dssp CEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE-ECTTT
T ss_pred ceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccc-cChhH
Confidence 2578888888888888776 47778888888888888875 56778
Q ss_pred hcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCCccee
Q 002189 308 FSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPAVNLT 386 (955)
Q Consensus 308 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~ 386 (955)
|.++++|+.|+|++|.+++..|..+..+++|++|+|++|++++..|..+ .+.+|+.|+|++|+|+++++..+..+++|+
T Consensus 319 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 398 (455)
T 3v47_A 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQ 398 (455)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCccc
Confidence 8888888888888888888878888888888888888888888877654 467788888888888888887776666665
Q ss_pred EecC
Q 002189 387 LIDN 390 (955)
Q Consensus 387 ~l~n 390 (955)
.++.
T Consensus 399 ~L~l 402 (455)
T 3v47_A 399 KIWL 402 (455)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5543
No 248
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3e-36 Score=342.04 Aligned_cols=261 Identities=21% Similarity=0.279 Sum_probs=201.2
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-----------CCCcceEEEEEEe
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-----------HKNLVSLLGFCFD 695 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~ 695 (955)
++|...+.||+|+||+||+|+. .+++.||||+++.. ....+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5688899999999999999986 57899999998753 233467889999999886 8999999999987
Q ss_pred CC----eEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-cCCCeeccCCCCccEEEc------C
Q 002189 696 RG----EQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL-ANPPIIHRDIKSSNILLD------E 764 (955)
Q Consensus 696 ~~----~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NIll~------~ 764 (955)
.+ ..++||||+ +++|.+++.......+++..+..++.|++.||+|||+. + |+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcC
Confidence 54 789999999 89999998765555699999999999999999999997 8 99999999999994 4
Q ss_pred CCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCch-----HHH
Q 002189 765 RLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKY-----IVR 839 (955)
Q Consensus 765 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~-----~~~ 839 (955)
.+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..... ..+
T Consensus 174 ~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp EEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred cceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 458999999999876432 2234689999999999999999999999999999999999999974321 111
Q ss_pred HHHHHHhhhhhhhh--------hhhccCCc-------------------CCCCCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 002189 840 EIRTVMDKKKELYN--------LYELIDPT-------------------IGLSTTLKGFEKYVDLALKCVQESGDDRPTM 892 (955)
Q Consensus 840 ~~~~~~~~~~~~~~--------~~~~~d~~-------------------l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 892 (955)
.+..+......... ....++.. ...........++.+|+.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 12221111000000 00000000 0112334566889999999999999999999
Q ss_pred HHHHHH
Q 002189 893 SEVVKD 898 (955)
Q Consensus 893 ~evl~~ 898 (955)
+|++++
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999975
No 249
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.4e-37 Score=339.72 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=200.5
Q ss_pred HHHHHHhcCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc------hhHHHHHHHHHHHhcc--CCCcceEEE
Q 002189 621 EEVKKYTNNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ------GGQEFKMEIELLSRVH--HKNLVSLLG 691 (955)
Q Consensus 621 ~el~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~~ 691 (955)
.+.....++|...+.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|+.++++++ |+||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 33444567899999999999999999985 47899999998754322 2245778999999996 599999999
Q ss_pred EEEeCCeEEEEEEecCC-CCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc-CCCceE
Q 002189 692 FCFDRGEQMLIYEFVPN-GSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD-ERLNAK 769 (955)
Q Consensus 692 ~~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~-~~~~~k 769 (955)
++.+.+..++||||+.+ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++ +++.+|
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEE
Confidence 99999999999999976 89999887543 6899999999999999999999998 99999999999999 789999
Q ss_pred EeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCC-CChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhh
Q 002189 770 VADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKK 848 (955)
Q Consensus 770 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 848 (955)
|+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ....
T Consensus 191 L~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~~~ 259 (320)
T 3a99_A 191 LIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-------IRGQ 259 (320)
T ss_dssp ECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-------HHCC
T ss_pred EeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-------hccc
Confidence 99999998765332 223569999999999987776 67899999999999999999999643211 1000
Q ss_pred hhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 849 KELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 849 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.... .....++.+++.+||+.||++||+++|++++
T Consensus 260 -------~~~~--------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 -------VFFR--------QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp -------CCCS--------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------cccc--------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011 1123678899999999999999999999874
No 250
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.5e-36 Score=343.94 Aligned_cols=250 Identities=22% Similarity=0.350 Sum_probs=186.9
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEEEEec
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~ 706 (955)
.+|...++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.+.+..++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45778889999999996655556789999999875433 2356899999999 7999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC-----CCceEEeecccccccCC
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE-----RLNAKVADFGLSKSMSD 781 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~-----~~~~kl~DFGla~~~~~ 781 (955)
+ |+|.+++.... ....+..+..++.|+++||+|||+.+ |+||||||+||+++. ...+||+|||+++....
T Consensus 101 ~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 101 A-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp S-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred C-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 5 69999887554 23444456789999999999999998 999999999999953 34588999999987654
Q ss_pred CCCc-ceeeeeecCCCCCCHHHhh---hCCCCChhhhHHHHHHHHHHHh-CCCCCcCCchHHHHHHHHHhhhhhhhhhhh
Q 002189 782 SEKD-HITTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVLMLELLT-GRRPIERGKYIVREIRTVMDKKKELYNLYE 856 (955)
Q Consensus 782 ~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~ksDvwS~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (955)
.... .......||+.|+|||++. ...++.++|||||||++|||+| |..||...... ........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--~~~~~~~~--------- 244 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QANILLGA--------- 244 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--HHHHHTTC---------
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--HHHHHhcc---------
Confidence 3211 2233467999999999997 4677889999999999999999 88888543221 11111100
Q ss_pred ccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 857 LIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 857 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
.... ...........+.+++.+||+.||.+||+++|++++
T Consensus 245 -~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 245 -CSLD-CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp -CCCT-TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -CCcc-ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0000 011122344567899999999999999999999953
No 251
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=344.95 Aligned_cols=310 Identities=17% Similarity=0.150 Sum_probs=214.2
Q ss_pred CCccEEeCC-----------CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCccccccccccccccc
Q 002189 55 NWEGIGCTN-----------SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGC 123 (955)
Q Consensus 55 ~w~gv~C~~-----------~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N 123 (955)
.|..|.|.. ..++.|+|++|+|++..+..|..+++|++|+|++|+ +.+..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENI-VSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSC-CCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCc-cCEeChhhhhCCccCCEEECCCC
Confidence 467788863 356677777777777666777777777777777775 66666777777777777777777
Q ss_pred ccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcc
Q 002189 124 SFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQL 203 (955)
Q Consensus 124 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l 203 (955)
++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+. .+.+|+.|+|++|++
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS------GLNSLEQLTLEKCNL 164 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSST------TCTTCCEEEEESCCC
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhcc------CCCCCCEEECCCCcC
Confidence 77755555567777777777777777766667777777777777777777755554433 345566667777777
Q ss_pred cccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-C
Q 002189 204 SGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-N 282 (955)
Q Consensus 204 ~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~ 282 (955)
+ .+|...+..+.+|+.|+|++|++.+..+..|..+++|+.|++++|.+.+.+|..+....+|+.|+|++|.|+++++ .
T Consensus 165 ~-~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 243 (477)
T 2id5_A 165 T-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 243 (477)
T ss_dssp S-SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHH
T ss_pred c-ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHH
Confidence 6 5666666666777777777777776666677777777777777776666666666666677777777777776554 3
Q ss_pred CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc-chhhh
Q 002189 283 LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT-SYSEN 361 (955)
Q Consensus 283 ~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l 361 (955)
+..+++|++|+|++|.+++ ..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+ .+.+|
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 322 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPIST-IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNL 322 (477)
T ss_dssp HTTCTTCCEEECCSSCCCE-ECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGC
T ss_pred hcCccccCeeECCCCcCCc-cChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCccc
Confidence 6667777777777777764 445566777777777777777777667777777777777777777776665543 35566
Q ss_pred hhhcccCCcccc
Q 002189 362 LLVNLQNNRISA 373 (955)
Q Consensus 362 ~~L~L~~N~l~~ 373 (955)
+.|+|++|++.+
T Consensus 323 ~~L~l~~N~l~c 334 (477)
T 2id5_A 323 ETLILDSNPLAC 334 (477)
T ss_dssp CEEECCSSCEEC
T ss_pred CEEEccCCCccC
Confidence 677777777654
No 252
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.5e-34 Score=346.73 Aligned_cols=315 Identities=18% Similarity=0.207 Sum_probs=209.2
Q ss_pred CccEEeCC-----------CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccc
Q 002189 56 WEGIGCTN-----------SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCS 124 (955)
Q Consensus 56 w~gv~C~~-----------~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~ 124 (955)
+..+.|.. ..++.|+|++|.|++..|..|.++++|++|+|++|+ +.+..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~-i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQ-IYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCC-CCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCc-cceeChhhccCccccCeeeCCCCc
Confidence 45688853 478999999999999889999999999999999997 888999999999999999999999
Q ss_pred cCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeec-cCCCCCCCCchh---------------
Q 002189 125 FSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGE-IPVSDGNSPGLD--------------- 188 (955)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~-ip~~~~~~~~l~--------------- 188 (955)
+++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++. +|..+ .++.|+
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF-PTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC-CCTTCCEEECCSSCCCEECHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCccccc-CCcccCEEEcccCcccccChh
Confidence 9988899999999999999999999987788899999999999999999863 34332 233222
Q ss_pred ---hhhccc--cccccCCcccccCCccccCCc------------------------------------------------
Q 002189 189 ---MLVRAK--HFHFGKNQLSGSIPEKLFRPD------------------------------------------------ 215 (955)
Q Consensus 189 ---~L~~L~--~L~L~~N~l~g~ip~~~~~~~------------------------------------------------ 215 (955)
.+.+|+ .|++++|++++..|. .|...
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPG-AFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTT-TTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhcccceeEEecCCCccCccChh-HhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 233445 566666666633322 22110
Q ss_pred ---cceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCE
Q 002189 216 ---MVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSY 291 (955)
Q Consensus 216 ---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 291 (955)
..|+.|++++|++++..+..|..+++|++|++++|.++ .+|..+..+++|++|+|++|.+++.++ .+..+++|++
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 14556666666666555556666666666666666666 566666666666666666666666544 4555555555
Q ss_pred EECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecC--CcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccC
Q 002189 292 LDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQI--PADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQN 368 (955)
Q Consensus 292 L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~ 368 (955)
|++++|.+.+...+..+..+++|+.|++++|.+++.. +..+..+++|++|+|++|++++..+..+. +.+|+.|+|++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 5555555544333334445555555555555554433 44444444555555555544444443322 33344444444
Q ss_pred Cccccc
Q 002189 369 NRISAY 374 (955)
Q Consensus 369 N~l~~~ 374 (955)
|++++.
T Consensus 410 n~l~~~ 415 (606)
T 3t6q_A 410 TRLKVK 415 (606)
T ss_dssp CCEECC
T ss_pred CcCCCc
Confidence 444443
No 253
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-35 Score=359.23 Aligned_cols=240 Identities=22% Similarity=0.339 Sum_probs=194.3
Q ss_pred cCCCccCeeeccCceEEEEEEeC--CCcEEEEEEcccCCc-chhHHHHHHHHHHHhccCCCcceEEEEEEeCCe-----E
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP--NGQLIAIKRAQQGSM-QGGQEFKMEIELLSRVHHKNLVSLLGFCFDRGE-----Q 699 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~--~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~ 699 (955)
++|...+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67889999999999999999875 689999999875432 334578899999999999999999999988765 7
Q ss_pred EEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
||||||+++++|.+++.. .+++.+++.++.||++||+|||+.+ |+||||||+||+++++ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 999999999999987754 5899999999999999999999998 9999999999999986 8999999999876
Q ss_pred CCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccC
Q 002189 780 SDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELID 859 (955)
Q Consensus 780 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (955)
... ....||++|+|||++.++. +.++|||||||++|||++|.+|+..... ..+.
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~-------------------~~~~ 285 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV-------------------DGLP 285 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-------------------SSCC
T ss_pred ccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-------------------cccc
Confidence 533 2356999999999987654 8999999999999999999988753110 0000
Q ss_pred CcCCCCCCHHHHHHHHHHHHHhhccCCCCCCC-HHHHHHHHHHHHH
Q 002189 860 PTIGLSTTLKGFEKYVDLALKCVQESGDDRPT-MSEVVKDIENILQ 904 (955)
Q Consensus 860 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~~~~ 904 (955)
...........+.+++.+||+.||.+||+ ++++.+.|..++.
T Consensus 286 ---~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 ---EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ---TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ---ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 00111122367889999999999999995 6666777776653
No 254
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.2e-36 Score=358.65 Aligned_cols=273 Identities=25% Similarity=0.328 Sum_probs=207.8
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCC-cchhHHHHHHHHHHHhccCCCcceEEEEEEe------CCeE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGS-MQGGQEFKMEIELLSRVHHKNLVSLLGFCFD------RGEQ 699 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~ 699 (955)
++|...+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999986 468999999987642 3335678999999999999999999998765 6678
Q ss_pred EEEEEecCCCCcccccCCCC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCc---eEEeeccc
Q 002189 700 MLIYEFVPNGSLGDSLSGKN-GIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLN---AKVADFGL 775 (955)
Q Consensus 700 ~lV~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~DFGl 775 (955)
++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999987643 335888899999999999999999998 999999999999997665 99999999
Q ss_pred ccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhh
Q 002189 776 SKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLY 855 (955)
Q Consensus 776 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (955)
++....... .....||+.|+|||.+.+..++.++|||||||++|||++|..||........+...............
T Consensus 171 a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 171 AKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred ccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence 987654332 23467999999999999999999999999999999999999999765444333221111111000001
Q ss_pred hccCCc--------CCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHH-----HHHHHHHHHHHc
Q 002189 856 ELIDPT--------IGLSTTLKGFEKYVDLALKCVQESGDDRPTMSE-----VVKDIENILQQA 906 (955)
Q Consensus 856 ~~~d~~--------l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~~~~ 906 (955)
+..... ............+.+++.+||..||.+|||++| ..+.++.+++..
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 111110 111233456788999999999999999999988 456677776543
No 255
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=362.12 Aligned_cols=336 Identities=19% Similarity=0.159 Sum_probs=188.3
Q ss_pred CCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccc
Q 002189 55 NWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIG 134 (955)
Q Consensus 55 ~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 134 (955)
+|..|.+...+++.|||++|.|++..+..|.++++|++|+|++|..+....|..|.++++|++|+|++|.+++..|..|.
T Consensus 15 ~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 15 NLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 45555554467777777777777766666666666666666555312222245555555555555555555555555555
Q ss_pred cCCCCcEEEccCCCCcCcCCCC--CCCCCCcCeeecCCceeeeccC-CCCCCCCchhhh--------------------h
Q 002189 135 SLQELVLLSLNSNGFSGRVPPS--IGNLSNLYWLDLTDNKLEGEIP-VSDGNSPGLDML--------------------V 191 (955)
Q Consensus 135 ~l~~L~~L~Ls~N~l~~~~p~~--~~~L~~L~~L~L~~N~l~g~ip-~~~~~~~~l~~L--------------------~ 191 (955)
++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..+++++.|+.| .
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~ 174 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGK 174 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHC
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCC
Confidence 5555555555555555433332 4455555555555555443322 122222221110 1
Q ss_pred c------------------------------cccccccCCcccccC----------------------------------
Q 002189 192 R------------------------------AKHFHFGKNQLSGSI---------------------------------- 207 (955)
Q Consensus 192 ~------------------------------L~~L~L~~N~l~g~i---------------------------------- 207 (955)
+ |+.|++++|++++.+
T Consensus 175 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~ 254 (844)
T 3j0a_A 175 TLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKD 254 (844)
T ss_dssp SSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTT
T ss_pred ccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCC
Confidence 1 333444444333222
Q ss_pred ---------------------------CccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccc
Q 002189 208 ---------------------------PEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNL 260 (955)
Q Consensus 208 ---------------------------p~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 260 (955)
+...|..+++|+.|+|++|++++..|..|..+++|++|+|++|.+++..|..|
T Consensus 255 ~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 334 (844)
T 3j0a_A 255 PDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNF 334 (844)
T ss_dssp GGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSC
T ss_pred CChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHh
Confidence 22233344455556666666665555566666666666666666665556666
Q ss_pred cCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCC------------------------------------
Q 002189 261 NNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASE------------------------------------ 303 (955)
Q Consensus 261 ~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~------------------------------------ 303 (955)
..+++|+.|+|++|.|++.++ .+..+++|++|+|++|.+++..
T Consensus 335 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~ 414 (844)
T 3j0a_A 335 YGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLE 414 (844)
T ss_dssp SSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCC
T ss_pred cCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccc
Confidence 666666666666666665555 3555666666666666554311
Q ss_pred ---CChhhcCCCCCCEEECcCCccee------------------------------cCCcCCCCCCCCcEEEeecCccee
Q 002189 304 ---VPSWFSSMQSLTTLMMENTNLKG------------------------------QIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 304 ---~p~~~~~l~~L~~L~Ls~N~l~~------------------------------~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
.+..+.++++|+.|+|++|++++ ..+..|..+++|+.|+|++|+|++
T Consensus 415 ~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 494 (844)
T 3j0a_A 415 NLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNS 494 (844)
T ss_dssp SSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTT
T ss_pred cCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccc
Confidence 01112345555555555555542 122346678899999999999999
Q ss_pred eeCCCc-chhhhhhhcccCCccccccCCCCC-CCcceeEecC
Q 002189 351 TLDLGT-SYSENLLVNLQNNRISAYTERGGA-PAVNLTLIDN 390 (955)
Q Consensus 351 ~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~-~~~~L~~l~n 390 (955)
.++..+ .+.+|+.|+|++|+|+++++..+. .+..|.+.+|
T Consensus 495 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N 536 (844)
T 3j0a_A 495 LPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRN 536 (844)
T ss_dssp CCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEE
T ss_pred cChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCC
Confidence 888765 577888999999999999887765 2344444443
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.4e-35 Score=354.86 Aligned_cols=322 Identities=17% Similarity=0.237 Sum_probs=215.5
Q ss_pred CCCEeEEEecCCcCccc-----------------cCcCcC--CCCcccEEecCCCCCCccCCCCCccccccccccccccc
Q 002189 63 NSRVTSITLSGMGLKGQ-----------------LSGDIT--GLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGC 123 (955)
Q Consensus 63 ~~~v~~L~L~~~~l~~~-----------------~~~~l~--~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N 123 (955)
..+++.|+|++|.+++. +|..++ ++++|++|+|++|+ +.+.+|..|+++++|++|+|++|
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCP-NLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCT-TCSSCCTTTTTCSSCCEEECTTC
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCc-CCccChHHHhcCCCCCEEECcCC
Confidence 36899999999999986 899998 99999999999997 89999999999999999999999
Q ss_pred c-cCC-CCCCccccC------CCCcEEEccCCCCcCcCCC--CCCCCCCcCeeecCCceeeeccCCCCCCCCchh-----
Q 002189 124 S-FSG-PIPDSIGSL------QELVLLSLNSNGFSGRVPP--SIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLD----- 188 (955)
Q Consensus 124 ~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~----- 188 (955)
+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|+|++|+++|.+| .++.++.|+
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~ 361 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC
Confidence 8 888 788888876 89999999999999 7888 89999999999999999998888 554432222
Q ss_pred ------------hhhc-cccccccCCcccccCCccccCC-ccceeeeeccCCCccccCCcccC-------CCCCCcEEEc
Q 002189 189 ------------MLVR-AKHFHFGKNQLSGSIPEKLFRP-DMVLIHVLFDSNNLTGELPATLG-------LVKSLEVVRF 247 (955)
Q Consensus 189 ------------~L~~-L~~L~L~~N~l~g~ip~~~~~~-~~~L~~L~L~~N~l~~~~p~~l~-------~l~~L~~L~L 247 (955)
.+.+ |++|++++|+++ .+|..+... ..+|+.|++++|++++.+|..|. .+++|+.|+|
T Consensus 362 ~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 362 YNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred CCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 2233 555555555555 555433222 22556666666666655555555 5556666666
Q ss_pred ccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCC-C-------CCCCEEECcCCCCCCCCCChhhc--CCCCCCEE
Q 002189 248 DRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTG-L-------SVLSYLDMSNNSFDASEVPSWFS--SMQSLTTL 317 (955)
Q Consensus 248 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-l-------~~L~~L~Ls~N~l~~~~~p~~~~--~l~~L~~L 317 (955)
++|.++...+..+..+++|+.|+|++|+|+.+++.+.. . ++|++|+|++|+++ .+|..+. .+++|+.|
T Consensus 441 s~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~~~l~~L~~L 518 (636)
T 4eco_A 441 SNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT--KLSDDFRATTLPYLVGI 518 (636)
T ss_dssp CSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC--BCCGGGSTTTCTTCCEE
T ss_pred cCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC--ccChhhhhccCCCcCEE
Confidence 66666632223344456666666666666644443222 1 26666666666665 3555554 66666666
Q ss_pred ECcCCcceecCCcCCCCCCCCcEEEe------ecCcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCCcceeEecC
Q 002189 318 MMENTNLKGQIPADLFSIPHLQTVVM------KTNELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPAVNLTLIDN 390 (955)
Q Consensus 318 ~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n 390 (955)
+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+ .+.+|+.|+|++|+|+.++...+..+..|++.+|
T Consensus 519 ~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~~~~L~~L~Ls~N 597 (636)
T 4eco_A 519 DLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDIKDN 597 (636)
T ss_dssp ECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCCCTTCCEEECCSC
T ss_pred ECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCccCHhHhCcCCEEECcCC
Confidence 666666665 5666666666666666 3455555555443 3455556666666665555554444444444444
Q ss_pred c
Q 002189 391 P 391 (955)
Q Consensus 391 ~ 391 (955)
+
T Consensus 598 ~ 598 (636)
T 4eco_A 598 P 598 (636)
T ss_dssp T
T ss_pred C
Confidence 4
No 257
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.8e-35 Score=348.65 Aligned_cols=312 Identities=19% Similarity=0.221 Sum_probs=204.9
Q ss_pred CCCccEEeCC-------------CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccc
Q 002189 54 DNWEGIGCTN-------------SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLML 120 (955)
Q Consensus 54 ~~w~gv~C~~-------------~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~L 120 (955)
|.|.|+ |+. .+++.|+|++|++++..|..|..+++|++|+|++|+ +.+..|..|.++++|++|+|
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~-i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSR-INTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSC-CCEECTTTTTTCTTCCEEEC
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCC-cCccChhhccccccCCEEEC
Confidence 368887 752 378999999999998888889999999999999996 88888888999999999999
Q ss_pred cccccCCCCCCccccCCCCcEEEccCCCCcCc-CCCCCCCCCCcCeeecCCceeeeccC---------------------
Q 002189 121 VGCSFSGPIPDSIGSLQELVLLSLNSNGFSGR-VPPSIGNLSNLYWLDLTDNKLEGEIP--------------------- 178 (955)
Q Consensus 121 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~L~~L~~L~L~~N~l~g~ip--------------------- 178 (955)
++|++++..|..|+++++|++|+|++|++++. +|..++++++|++|+|++|++.+.+|
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 99998877766788888888888888888752 45566677777777776666433443
Q ss_pred ----CCCCCCCchh------------------hhhccccccccCCcccccC--CccccCC--------------------
Q 002189 179 ----VSDGNSPGLD------------------MLVRAKHFHFGKNQLSGSI--PEKLFRP-------------------- 214 (955)
Q Consensus 179 ----~~~~~~~~l~------------------~L~~L~~L~L~~N~l~g~i--p~~~~~~-------------------- 214 (955)
..++.++.|+ .+++|++|++++|++++.. |..+...
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred ccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 3333333222 1345555666666555310 0000000
Q ss_pred -------------------------------------------------------------------ccceeeeeccCCC
Q 002189 215 -------------------------------------------------------------------DMVLIHVLFDSNN 227 (955)
Q Consensus 215 -------------------------------------------------------------------~~~L~~L~L~~N~ 227 (955)
..+|+.|++++|+
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~ 321 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSK 321 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSC
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCc
Confidence 0123333333333
Q ss_pred ccccCCccc-CCCCCCcEEEcccCCCCCCccc---cccCCCCCCEEEccCCcCcccCC---CCCCCCCCCEEECcCCCCC
Q 002189 228 LTGELPATL-GLVKSLEVVRFDRNSLSGPVPS---NLNNLTSVNDLYLSNNKLTGAMP---NLTGLSVLSYLDMSNNSFD 300 (955)
Q Consensus 228 l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~---~l~~l~~L~~L~Ls~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~ 300 (955)
+. .+|..+ ..+++|++|+|++|.+++.+|. .+..+++|+.|+|++|+|++.++ .+..+++|++|+|++|+++
T Consensus 322 l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 400 (549)
T 2z81_A 322 VF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH 400 (549)
T ss_dssp CC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred cc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc
Confidence 33 234333 4577888888888888766543 36777788888888888876653 3667778888888888876
Q ss_pred CCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccccC
Q 002189 301 ASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTE 376 (955)
Q Consensus 301 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~ 376 (955)
.+|..+..+++|+.|+|++|.++ .+|..+. ++|++|+|++|+|++.+ ..+.+|+.|+|++|+|+.++.
T Consensus 401 --~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~---~~l~~L~~L~Ls~N~l~~ip~ 468 (549)
T 2z81_A 401 --PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS---LFLPRLQELYISRNKLKTLPD 468 (549)
T ss_dssp --CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSSCCC
T ss_pred --cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc---ccCChhcEEECCCCccCcCCC
Confidence 36777777777888888777776 3333321 45666666666665543 234455566666666655543
No 258
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.6e-34 Score=344.32 Aligned_cols=327 Identities=23% Similarity=0.201 Sum_probs=235.2
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..+..|.++++|++|+|++|+ +.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCE-IETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC-CCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCc-ccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 478888999998888888888888888888888886 8888888888888888888888888877788888888888888
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeee-ccCCCCCCCCchhhh------------------hcc----ccccccC
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEG-EIPVSDGNSPGLDML------------------VRA----KHFHFGK 200 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g-~ip~~~~~~~~l~~L------------------~~L----~~L~L~~ 200 (955)
|++|++++..+..|+++++|++|+|++|++++ .+|..+++++.|+.| .+| ..|++++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 88888887666778888888888888888875 456655544333221 111 1344444
Q ss_pred CcccccCCccccCCccceeeeeccCCCcc---------------------------------------------------
Q 002189 201 NQLSGSIPEKLFRPDMVLIHVLFDSNNLT--------------------------------------------------- 229 (955)
Q Consensus 201 N~l~g~ip~~~~~~~~~L~~L~L~~N~l~--------------------------------------------------- 229 (955)
|+++ .++...+... +|+.|++++|.++
T Consensus 191 n~l~-~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 191 NPID-FIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp CCCC-EECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred CCcc-eeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 4444 3333333332 3444444444332
Q ss_pred ---------------------------------------------------ccCC--------------------cccCC
Q 002189 230 ---------------------------------------------------GELP--------------------ATLGL 238 (955)
Q Consensus 230 ---------------------------------------------------~~~p--------------------~~l~~ 238 (955)
+.+| ..+..
T Consensus 269 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 269 TYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp CCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred cccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhcc
Confidence 1122 12334
Q ss_pred CCCCcEEEcccCCCCCC--ccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCE
Q 002189 239 VKSLEVVRFDRNSLSGP--VPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTT 316 (955)
Q Consensus 239 l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~ 316 (955)
+++|++|++++|.+++. +|..+..+++|+.|+|++|.+++.+..+..+++|++|++++|++++......+.++++|+.
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 55666666666666644 2667777778888888888877777777888888888888888876333367888888888
Q ss_pred EECcCCcceecCCcCCCCCCCCcEEEeecCccee-eeCCC-cchhhhhhhcccCCccccccCCCCCCCcceeEecCcch
Q 002189 317 LMMENTNLKGQIPADLFSIPHLQTVVMKTNELNG-TLDLG-TSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNPIC 393 (955)
Q Consensus 317 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~-~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~~c 393 (955)
|++++|.+++..|..+..+++|++|+|++|++++ .+|.. ..+.+|+.|+|++|+++++++..+..+.+|+.++...|
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 507 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 507 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCC
Confidence 8888888888888888888888888888888887 45554 44677888888888888888888877777777766543
No 259
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.8e-34 Score=313.46 Aligned_cols=230 Identities=13% Similarity=0.069 Sum_probs=183.0
Q ss_pred cCCCccCeeeccCceEEEEEEeC-CCcEEEEEEcccCCcc---hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSMQ---GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 703 (955)
++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+.++.+++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999975 5899999999865332 2367899999999999999999999999999999999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCC
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSE 783 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~ 783 (955)
||+++++|.++++.. ....+..+++.|+++||+|||+.+ |+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999998542 355578889999999999999998 9999999999999999999997443
Q ss_pred CcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCC
Q 002189 784 KDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIG 863 (955)
Q Consensus 784 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (955)
|++ .++.++|||||||++|||+||+.||........ .......+.....
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-----------~~~~~~~~~~~~~ 223 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-----------LAPAERDTAGQPI 223 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-----------SEECCBCTTSCBC
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-----------hHHHHHHhccCCC
Confidence 343 368899999999999999999999975332100 0000000000000
Q ss_pred --CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 002189 864 --LSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKDIENILQQ 905 (955)
Q Consensus 864 --~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 905 (955)
.........++.+++.+||+.||++| |++|+++.|+++...
T Consensus 224 ~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 224 EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 00111233678999999999999999 999999999998644
No 260
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.2e-33 Score=342.02 Aligned_cols=338 Identities=18% Similarity=0.190 Sum_probs=216.0
Q ss_pred CCCCCccEEeCC-----------CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccc
Q 002189 52 CGDNWEGIGCTN-----------SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLML 120 (955)
Q Consensus 52 C~~~w~gv~C~~-----------~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~L 120 (955)
|.|.+..|.|+. .+++.|+|++|++++..+..|..+++|++|+|++|+ +.+..|..|+++++|++|+|
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L 80 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT-ISKLEPELCQKLPMLKVLNL 80 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSC-CCCCCTTHHHHCTTCCEEEC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCc-cCccCHHHHhcccCcCEEEC
Confidence 545566677752 478999999999998888889999999999999997 88888999999999999999
Q ss_pred cccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh----------
Q 002189 121 VGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML---------- 190 (955)
Q Consensus 121 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L---------- 190 (955)
++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++.++.|+.|
T Consensus 81 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 9999996555679999999999999999997777889999999999999999998777776655444322
Q ss_pred ----------hccccccccCCcccccCCccccCC--------------------------ccceeeeeccCCCccccCCc
Q 002189 191 ----------VRAKHFHFGKNQLSGSIPEKLFRP--------------------------DMVLIHVLFDSNNLTGELPA 234 (955)
Q Consensus 191 ----------~~L~~L~L~~N~l~g~ip~~~~~~--------------------------~~~L~~L~L~~N~l~~~~p~ 234 (955)
++|+.|++++|++++..|..+... ..+|+.|++++|++++..|.
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~ 240 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT
T ss_pred CHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh
Confidence 456677777777764333221100 02233333444444443444
Q ss_pred ccCCCCC--CcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-------------------------------
Q 002189 235 TLGLVKS--LEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP------------------------------- 281 (955)
Q Consensus 235 ~l~~l~~--L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~------------------------------- 281 (955)
.|..++. |+.|+|++|.+++..|..|..+++|+.|+|++|.+++.++
T Consensus 241 ~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i 320 (680)
T 1ziw_A 241 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320 (680)
T ss_dssp TTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE
T ss_pred HhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc
Confidence 4443332 5555555555544444444555555555555554444333
Q ss_pred ---CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEEC----------------------------cCCcceecCCc
Q 002189 282 ---NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMM----------------------------ENTNLKGQIPA 330 (955)
Q Consensus 282 ---~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~L----------------------------s~N~l~~~~p~ 330 (955)
.+..+++|++|+|++|.+++ ..+..|.++++|+.|++ ++|++++..|.
T Consensus 321 ~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~ 399 (680)
T 1ziw_A 321 DDFSFQWLKCLEHLNMEDNDIPG-IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD 399 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCC-CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTT
T ss_pred ChhhcccCCCCCEEECCCCccCC-CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChh
Confidence 23344555555555555544 33444444444444443 44445555566
Q ss_pred CCCCCCCCcEEEeecCcceeeeCC--CcchhhhhhhcccCCccccccCCCCCCCcceeEecCc
Q 002189 331 DLFSIPHLQTVVMKTNELNGTLDL--GTSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNP 391 (955)
Q Consensus 331 ~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~ 391 (955)
.+..+++|+.|+|++|++++.++. +..+.+++.|+|++|+++++.+..+..+.+|+.++..
T Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~ 462 (680)
T 1ziw_A 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLR 462 (680)
T ss_dssp TTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECT
T ss_pred hhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhc
Confidence 666666666666666666665442 2335556666777776666666666665555555443
No 261
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2e-34 Score=316.82 Aligned_cols=227 Identities=21% Similarity=0.291 Sum_probs=180.2
Q ss_pred cCCCcc-CeeeccCceEEEEEEe-CCCcEEEEEEcccCCcchhHHHHHHHHHH-HhccCCCcceEEEEEEe----CCeEE
Q 002189 628 NNFSDA-NDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQGGQEFKMEIELL-SRVHHKNLVSLLGFCFD----RGEQM 700 (955)
Q Consensus 628 ~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~~ 700 (955)
++|... +.||+|+||+||+|+. .+++.||||+++. ...+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 6799999999999986 4789999999864 24677899888 55589999999999987 67789
Q ss_pred EEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcC---CCceEEeeccccc
Q 002189 701 LIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDE---RLNAKVADFGLSK 777 (955)
Q Consensus 701 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~DFGla~ 777 (955)
+||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998766567999999999999999999999998 999999999999998 7889999999987
Q ss_pred ccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhc
Q 002189 778 SMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYEL 857 (955)
Q Consensus 778 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (955)
... +..++.++|||||||++|||++|+.||........ ... ....
T Consensus 169 ~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----~~~------~~~~ 213 (299)
T 3m2w_A 169 ETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----SPG------MKTR 213 (299)
T ss_dssp ECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CC------SCCS
T ss_pred ccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----hHH------HHHH
Confidence 542 13467899999999999999999999964322110 000 0000
Q ss_pred cCCcCCCCCC----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 858 IDPTIGLSTT----LKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 858 ~d~~l~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
+... ..... .....++.+++.+||+.||.+||+++|++++
T Consensus 214 ~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 IRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCTT-CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hhhc-cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 00111 1234678999999999999999999999986
No 262
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-34 Score=333.60 Aligned_cols=241 Identities=15% Similarity=0.148 Sum_probs=180.0
Q ss_pred cCCCccCeeeccCceEEEEEEe-CCCcEEEEEEcccCCcc---hhHHHHHHHHHHHhccC-CCcc----------e----
Q 002189 628 NNFSDANDVGSGGYGKVYKGTL-PNGQLIAIKRAQQGSMQ---GGQEFKMEIELLSRVHH-KNLV----------S---- 688 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H-~niv----------~---- 688 (955)
..|...+.||+|+||+||+|++ .+|+.||||+++..... ..+.+.+|+.+++.++| +|.. .
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3466678999999999999995 57999999998743222 24679999999999987 3211 1
Q ss_pred -------EEEEEEe-----CCeEEEEEEecCCCCcccccC-----CCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCee
Q 002189 689 -------LLGFCFD-----RGEQMLIYEFVPNGSLGDSLS-----GKNGIRLDWIRRLKIALGAARGLSYLHELANPPII 751 (955)
Q Consensus 689 -------l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 751 (955)
+..++.. ....+++|+++ +++|.+++. ......+++..++.++.|+++||+|||+.+ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 1111111 22457777765 789998884 223346888999999999999999999998 99
Q ss_pred ccCCCCccEEEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHh----------hhCCCCChhhhHHHHHHH
Q 002189 752 HRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYY----------MTQQLTEKSDVYSFGVLM 821 (955)
Q Consensus 752 HrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ksDvwS~Gv~l 821 (955)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999865322 334567 999999999 444588899999999999
Q ss_pred HHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002189 822 LELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLALKCVQESGDDRPTMSEVVKD 898 (955)
Q Consensus 822 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 898 (955)
|||+||+.||....... .....+... ...+..+.+++.+||+.||++||++.|++++
T Consensus 308 ~elltg~~Pf~~~~~~~--------------~~~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALG--------------GSEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGGS--------------CSGGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchhh--------------hHHHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999996433210 001111100 1223678999999999999999999888643
No 263
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.1e-34 Score=343.56 Aligned_cols=326 Identities=19% Similarity=0.165 Sum_probs=273.1
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..|..|.++++|++|+|++|+ +.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP-IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC-CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc-ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 588999999999998888889999999999999997 8888899999999999999999999877778899999999999
Q ss_pred ccCCCCcC-cCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCch-----------------------------------
Q 002189 144 LNSNGFSG-RVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGL----------------------------------- 187 (955)
Q Consensus 144 Ls~N~l~~-~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l----------------------------------- 187 (955)
|++|.+++ .+|..|+++++|++|+|++|++++..|..++.+..+
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 99999986 568889999999999999999887666544332211
Q ss_pred --------------------------------------------------------------------------------
Q 002189 188 -------------------------------------------------------------------------------- 187 (955)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (955)
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence
Q ss_pred ---------hhhhccccccccCCcccccCCcc-------------------ccCCccceeeeeccCCCcccc--CCcccC
Q 002189 188 ---------DMLVRAKHFHFGKNQLSGSIPEK-------------------LFRPDMVLIHVLFDSNNLTGE--LPATLG 237 (955)
Q Consensus 188 ---------~~L~~L~~L~L~~N~l~g~ip~~-------------------~~~~~~~L~~L~L~~N~l~~~--~p~~l~ 237 (955)
..+.+|+.|++++|++ +.+|.. .+..+++|+.|++++|++++. +|..+.
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 373 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDL 373 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHH
T ss_pred ccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhc
Confidence 1122444555555555 244421 122456788888888898876 488999
Q ss_pred CCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC--CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCC
Q 002189 238 LVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP--NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLT 315 (955)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 315 (955)
.+++|++|++++|.++ .+|..+..+++|+.|++++|.+++.++ .+..+++|++|++++|.+++ ..|..+.++++|+
T Consensus 374 ~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~ 451 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI-DFDGIFLGLTSLN 451 (606)
T ss_dssp CCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEE-CCTTTTTTCTTCC
T ss_pred cCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCc-cchhhhcCCCCCC
Confidence 9999999999999999 577899999999999999999999877 58899999999999999986 6788899999999
Q ss_pred EEECcCCccee-cCCcCCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCCcceeEecCcch
Q 002189 316 TLMMENTNLKG-QIPADLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNPIC 393 (955)
Q Consensus 316 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~~c 393 (955)
.|+|++|++++ .+|..+..+++|+.|+|++|++++.+|..+ .+.+|+.|+|++|+++++.+..+..+.+|+.++...|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 99999999998 489999999999999999999999888765 5788889999999999999998888888888877543
No 264
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.1e-34 Score=331.57 Aligned_cols=307 Identities=17% Similarity=0.220 Sum_probs=257.6
Q ss_pred CCCEeEEEecCCcCcccc-CcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCc--cccCCCC
Q 002189 63 NSRVTSITLSGMGLKGQL-SGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDS--IGSLQEL 139 (955)
Q Consensus 63 ~~~v~~L~L~~~~l~~~~-~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L 139 (955)
..+++.|+|++|.+.+.+ +..|.++++|++|+|++|+ +.+..|..|+++++|++|+|++|++++.+|.. |..+++|
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L 131 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ-FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSL 131 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT-TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTC
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCCc-cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccC
Confidence 368999999999998666 4679999999999999997 88888999999999999999999999755544 9999999
Q ss_pred cEEEccCCCCcCcCCCC-CCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCcccc------
Q 002189 140 VLLSLNSNGFSGRVPPS-IGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLF------ 212 (955)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~-~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~------ 212 (955)
++|+|++|+|++..|.. +.++++|++|+|++|++++..|..+..+.. .+|+.|++++|.+. .++...+
T Consensus 132 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~----~~L~~L~l~~n~l~-~~~~~~~~~~~~~ 206 (455)
T 3v47_A 132 EMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQG----KHFTLLRLSSITLQ-DMNEYWLGWEKCG 206 (455)
T ss_dssp CEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTT----CEEEEEECTTCBCT-TCSTTCTTHHHHC
T ss_pred CEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccc----ccccccccccCccc-ccchhhccccccc
Confidence 99999999999887876 899999999999999999888876654321 35566666666665 3332221
Q ss_pred --CCccceeeeeccCCCccccCCcccC---------------------------------------CCCCCcEEEcccCC
Q 002189 213 --RPDMVLIHVLFDSNNLTGELPATLG---------------------------------------LVKSLEVVRFDRNS 251 (955)
Q Consensus 213 --~~~~~L~~L~L~~N~l~~~~p~~l~---------------------------------------~l~~L~~L~Ls~N~ 251 (955)
....+|++|++++|++++..|..+. ..++|+.|++++|.
T Consensus 207 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 286 (455)
T 3v47_A 207 NPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSK 286 (455)
T ss_dssp CTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSC
T ss_pred cccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcc
Confidence 1234566666666666554443331 13689999999999
Q ss_pred CCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCc
Q 002189 252 LSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPA 330 (955)
Q Consensus 252 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 330 (955)
+++..|..+..+++|+.|+|++|.+++.++ .+.++++|++|+|++|.+++ ..+..|.++++|+.|+|++|++++..|.
T Consensus 287 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 365 (455)
T 3v47_A 287 IFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSYNHIRALGDQ 365 (455)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECGGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred ccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCC-cChhHhcCcccCCEEECCCCcccccChh
Confidence 998899999999999999999999999977 68899999999999999975 6688899999999999999999999999
Q ss_pred CCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCccccccC
Q 002189 331 DLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYTE 376 (955)
Q Consensus 331 ~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~ 376 (955)
.+..+++|++|+|++|+|++.++..+ .+.+|+.|+|++|+|++-.+
T Consensus 366 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 366 SFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999999999999999887764 57889999999999997655
No 265
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.8e-34 Score=318.64 Aligned_cols=243 Identities=14% Similarity=0.163 Sum_probs=186.8
Q ss_pred cCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc--------chhHHHHHHHHHHHhcc---------CCCcceEE
Q 002189 628 NNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM--------QGGQEFKMEIELLSRVH---------HKNLVSLL 690 (955)
Q Consensus 628 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------H~niv~l~ 690 (955)
++|...+.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|+++++.++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577889999999999999988 689999999975432 22367899999999886 88888888
Q ss_pred EEEE------------------------------eCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 002189 691 GFCF------------------------------DRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLS 740 (955)
Q Consensus 691 ~~~~------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~ 740 (955)
+.+. +.+..++||||+++|++.+.+.. ..+++..+..++.|++.||+
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHH
Confidence 7754 26789999999999987777654 35899999999999999999
Q ss_pred Hhh-hccCCCeeccCCCCccEEEcCCC--------------------ceEEeecccccccCCCCCcceeeeeecCCCCCC
Q 002189 741 YLH-ELANPPIIHRDIKSSNILLDERL--------------------NAKVADFGLSKSMSDSEKDHITTQVKGTMGYLD 799 (955)
Q Consensus 741 yLH-~~~~~~ivHrDlk~~NIll~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 799 (955)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|||
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~a 245 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTC
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccC
Confidence 999 888 99999999999999887 8999999999876432 3479999999
Q ss_pred HHHhhhCCCCChhhhHHHHHH-HHHHHhCCCCCcCCchHHHHHHHHHhhhhhhhhhhhccCCcCCCCCCHHHHHHHHHHH
Q 002189 800 PEYYMTQQLTEKSDVYSFGVL-MLELLTGRRPIERGKYIVREIRTVMDKKKELYNLYELIDPTIGLSTTLKGFEKYVDLA 878 (955)
Q Consensus 800 PE~~~~~~~~~ksDvwS~Gv~-l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li 878 (955)
||++.+.. +.++||||+|++ .+++++|..||................. ................++.+|+
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQM--------TFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTC--------CCSSCCCSHHHHHHHHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhh--------ccCcccchhhhhhcCHHHHHHH
Confidence 99998666 899999998777 7889999999843111111111111100 0111111111234567899999
Q ss_pred HHhhccCCCCCCCHHHHH-HH
Q 002189 879 LKCVQESGDDRPTMSEVV-KD 898 (955)
Q Consensus 879 ~~cl~~dP~~RPs~~evl-~~ 898 (955)
.+||+.| |++|++ ++
T Consensus 317 ~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 317 RTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHGGGSS-----SHHHHHHHC
T ss_pred HHHhccC-----CHHHHHhcC
Confidence 9999976 999988 53
No 266
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-33 Score=322.47 Aligned_cols=328 Identities=18% Similarity=0.164 Sum_probs=273.2
Q ss_pred CCCCCCCCCCCCCCccEEe---C------------------CCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCC
Q 002189 43 PPNWKNNDPCGDNWEGIGC---T------------------NSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDL 101 (955)
Q Consensus 43 ~~~w~~~~~C~~~w~gv~C---~------------------~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l 101 (955)
.++|.....|++.|.+..| + -.+++.|+++++.++...+..|..+++|++|+|++|+ +
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~-i 81 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ-I 81 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSC-C
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCc-c
Confidence 3578877777765555444 2 0578899999999996665668999999999999997 8
Q ss_pred ccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCC
Q 002189 102 RGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSD 181 (955)
Q Consensus 102 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~ 181 (955)
.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+|+...+..|.++++|++|+|++|++++..|..+
T Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 161 (390)
T 3o6n_A 82 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 161 (390)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred cccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhc
Confidence 88888899999999999999999998888889999999999999999995555557999999999999999996656554
Q ss_pred CCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCcccccc
Q 002189 182 GNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLN 261 (955)
Q Consensus 182 ~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 261 (955)
..+++|++|++++|+++ .++. ...+.|+.|++++|.+++ +...++|+.|++++|.++ .+|...
T Consensus 162 ------~~l~~L~~L~l~~n~l~-~~~~---~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~-~~~~~~- 224 (390)
T 3o6n_A 162 ------QATTSLQNLQLSSNRLT-HVDL---SLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSIN-VVRGPV- 224 (390)
T ss_dssp ------SSCTTCCEEECCSSCCS-BCCG---GGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCC-EEECCC-
T ss_pred ------cCCCCCCEEECCCCcCC-cccc---ccccccceeecccccccc-----cCCCCcceEEECCCCeee-eccccc-
Confidence 44677899999999998 4543 345789999999999885 345578999999999998 445433
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEE
Q 002189 262 NLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTV 341 (955)
Q Consensus 262 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 341 (955)
.++|+.|+|++|.+++. +.+..+++|++|+|++|.+++ ..|..|..+++|+.|+|++|++++ +|..+..+++|++|
T Consensus 225 -~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L 300 (390)
T 3o6n_A 225 -NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 300 (390)
T ss_dssp -CSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCE-EESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEE
T ss_pred -cccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCC-cChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEE
Confidence 58999999999999976 568889999999999999986 568899999999999999999995 67777889999999
Q ss_pred EeecCcceeeeCCCcchhhhhhhcccCCccccccCCCCCCCcceeEecCcc
Q 002189 342 VMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNPI 392 (955)
Q Consensus 342 ~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~~ 392 (955)
+|++|++++.++....+.+|+.|+|++|+|+.++...+..+..|.+.+|++
T Consensus 301 ~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~ 351 (390)
T 3o6n_A 301 DLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDW 351 (390)
T ss_dssp ECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCE
T ss_pred ECCCCcceecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCc
Confidence 999999998777667788999999999999999888888888888888884
No 267
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-33 Score=325.72 Aligned_cols=319 Identities=19% Similarity=0.164 Sum_probs=279.3
Q ss_pred cEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCC
Q 002189 58 GIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQ 137 (955)
Q Consensus 58 gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 137 (955)
+..|... -..++.++++++ .+|..+. ++|+.|+|++|+ +.+..|..|.++++|++|+|++|.+++..|..|.+++
T Consensus 6 ~C~C~~~-~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 80 (477)
T 2id5_A 6 RCECSAQ-DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNR-IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF 80 (477)
T ss_dssp TCEEETT-TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSC-CCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CCeECCC-CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCc-cceECHhHccCCCCCCEEECCCCccCEeChhhhhCCc
Confidence 5567643 236789999998 5666553 689999999997 8988899999999999999999999988899999999
Q ss_pred CCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccc
Q 002189 138 ELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMV 217 (955)
Q Consensus 138 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~ 217 (955)
+|++|+|++|+|+...+..|.++++|++|+|++|++++..|..+. .+.+|++|+|++|+++ .++...|..+.+
T Consensus 81 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~------~l~~L~~L~l~~n~l~-~~~~~~~~~l~~ 153 (477)
T 2id5_A 81 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQ------DLYNLKSLEVGDNDLV-YISHRAFSGLNS 153 (477)
T ss_dssp TCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTT------TCTTCCEEEECCTTCC-EECTTSSTTCTT
T ss_pred cCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHcc------ccccCCEEECCCCccc-eeChhhccCCCC
Confidence 999999999999976667799999999999999999977776654 4667889999999999 666667788899
Q ss_pred eeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccC-CCCCCCCCCCEEECcC
Q 002189 218 LIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAM-PNLTGLSVLSYLDMSN 296 (955)
Q Consensus 218 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~ 296 (955)
|++|+|++|++++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|+|++|.+.+.. +......+|++|+|++
T Consensus 154 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 233 (477)
T 2id5_A 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH 233 (477)
T ss_dssp CCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEES
T ss_pred CCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcC
Confidence 999999999999888888999999999999999999888889999999999999998866554 4566677999999999
Q ss_pred CCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCcccccc
Q 002189 297 NSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYT 375 (955)
Q Consensus 297 N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~ 375 (955)
|.++. ..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..+ .+.+|+.|+|++|+|++++
T Consensus 234 n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 312 (477)
T 2id5_A 234 CNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLE 312 (477)
T ss_dssp SCCCS-CCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCC
T ss_pred Ccccc-cCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeC
Confidence 99975 444679999999999999999999889999999999999999999999888765 4778899999999999999
Q ss_pred CCCCCCCcceeEec
Q 002189 376 ERGGAPAVNLTLID 389 (955)
Q Consensus 376 ~~~~~~~~~L~~l~ 389 (955)
+..|..+.+|+.++
T Consensus 313 ~~~~~~l~~L~~L~ 326 (477)
T 2id5_A 313 ESVFHSVGNLETLI 326 (477)
T ss_dssp GGGBSCGGGCCEEE
T ss_pred HhHcCCCcccCEEE
Confidence 98887766655553
No 268
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4e-33 Score=334.29 Aligned_cols=136 Identities=24% Similarity=0.233 Sum_probs=112.2
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..+..|..+++|++|+|++|+ +++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNR-IRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCC-CCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCC-CCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 588999999999998888899999999999999997 88888999999999999999999999 67766 899999999
Q ss_pred ccCCCCcC-cCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcc--cccCCcc
Q 002189 144 LNSNGFSG-RVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQL--SGSIPEK 210 (955)
Q Consensus 144 Ls~N~l~~-~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l--~g~ip~~ 210 (955)
|++|+|++ .+|..|+++++|++|+|++|++++. .+..+..+ +|+.|++++|++ ++..|..
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~------~~~~l~~L-~L~~L~L~~n~l~~~~~~~~~ 190 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL------DLLPVAHL-HLSCILLDLVSYHIKGGETES 190 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT------TTGGGTTS-CEEEEEEEESSCCCCSSSCCE
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC------chhhhhhc-eeeEEEeecccccccccCccc
Confidence 99999996 3467899999999999999998731 12223333 347777777777 5444443
No 269
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.3e-33 Score=338.52 Aligned_cols=328 Identities=18% Similarity=0.163 Sum_probs=280.9
Q ss_pred CCCCCCCCCCCCC---CccEEeCC------------------CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCC
Q 002189 43 PPNWKNNDPCGDN---WEGIGCTN------------------SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDL 101 (955)
Q Consensus 43 ~~~w~~~~~C~~~---w~gv~C~~------------------~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l 101 (955)
..+|....+|++. |.++.|+. .+++.|+++++.+....+..|..+++|++|+|++|+ +
T Consensus 9 l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~-l 87 (597)
T 3oja_B 9 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ-I 87 (597)
T ss_dssp --CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSC-C
T ss_pred ccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCC-C
Confidence 4678877777643 66665541 467889999999997777778999999999999997 8
Q ss_pred ccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCC
Q 002189 102 RGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSD 181 (955)
Q Consensus 102 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~ 181 (955)
.+..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|++|.+++..|..+
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 98888999999999999999999998888889999999999999999996666668999999999999999997777665
Q ss_pred CCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCcccccc
Q 002189 182 GNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLN 261 (955)
Q Consensus 182 ~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 261 (955)
+. +++|++|+|++|+++ .++.. .++.|+.|++++|.+++ +....+|+.|++++|.++ .++..+
T Consensus 168 ~~------l~~L~~L~L~~N~l~-~~~~~---~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~-~~~~~~- 230 (597)
T 3oja_B 168 QA------TTSLQNLQLSSNRLT-HVDLS---LIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSIN-VVRGPV- 230 (597)
T ss_dssp TT------CTTCCEEECTTSCCS-BCCGG---GCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCC-EEECSC-
T ss_pred hc------CCcCcEEECcCCCCC-CcChh---hhhhhhhhhcccCcccc-----ccCCchhheeeccCCccc-cccccc-
Confidence 44 667889999999999 45533 35679999999999985 345678999999999998 444433
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEE
Q 002189 262 NLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTV 341 (955)
Q Consensus 262 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 341 (955)
.++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++ ..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|
T Consensus 231 -~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L 306 (597)
T 3oja_B 231 -NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 306 (597)
T ss_dssp -CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCE-EESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEE
T ss_pred -CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCC-CCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEE
Confidence 37899999999999984 668889999999999999986 678899999999999999999996 67788889999999
Q ss_pred EeecCcceeeeCCCcchhhhhhhcccCCccccccCCCCCCCcceeEecCcc
Q 002189 342 VMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNPI 392 (955)
Q Consensus 342 ~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~~ 392 (955)
+|++|++++.++....+.+|..|+|++|+|++++...+..+..|.+.+|++
T Consensus 307 ~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~ 357 (597)
T 3oja_B 307 DLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDW 357 (597)
T ss_dssp ECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCE
T ss_pred ECCCCCCCccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCC
Confidence 999999997766666788999999999999999988888888888888884
No 270
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.5e-33 Score=346.41 Aligned_cols=312 Identities=19% Similarity=0.285 Sum_probs=199.9
Q ss_pred CCEeEEEecCCcCcc-----------------ccCcCcC--CCCcccEEecCCCCCCccCCCCCcccccccccccccccc
Q 002189 64 SRVTSITLSGMGLKG-----------------QLSGDIT--GLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCS 124 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~-----------------~~~~~l~--~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~ 124 (955)
.+++.|+|++|.+++ .+|..++ ++++|++|+|++|+ +.+.+|..|+++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~-l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP-NMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT-TCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC-CCccChHHHhCCCCCCEEECcCCC
Confidence 689999999999998 3888888 99999999999997 899999999999999999999998
Q ss_pred -cCC-CCCCccccCC-------CCcEEEccCCCCcCcCCC--CCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhcc
Q 002189 125 -FSG-PIPDSIGSLQ-------ELVLLSLNSNGFSGRVPP--SIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRA 193 (955)
Q Consensus 125 -l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L 193 (955)
+++ .+|..++.++ +|++|+|++|+|+ .+|. .|+++++|+.|+|++|+++ .+| .++. +++|
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~------L~~L 597 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGT------NVKL 597 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCT------TSEE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcC------CCcc
Confidence 887 7887777666 8999999999999 7888 8899999999999999988 777 5544 4445
Q ss_pred ccccccCCcccccCCccccCCccc-eeeeeccCCCccccCCcccCCCCC--CcEEEcccCCCCCCc--------------
Q 002189 194 KHFHFGKNQLSGSIPEKLFRPDMV-LIHVLFDSNNLTGELPATLGLVKS--LEVVRFDRNSLSGPV-------------- 256 (955)
Q Consensus 194 ~~L~L~~N~l~g~ip~~~~~~~~~-L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~-------------- 256 (955)
+.|+|++|+++ .+|..+.. +.+ |+.|+|++|+++ .+|..+..++. |+.|+|++|.+++.+
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~-l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCA-FTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCE-ECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred eEEECcCCccc-cchHHHhh-ccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 55556666555 55554332 233 555555555555 44544444332 444444444444433
Q ss_pred --------------cccc-cCCCCCCEEEccCCcCcccCCCCCC--------CCCCCEEECcCCCCCCCCCChhhc--CC
Q 002189 257 --------------PSNL-NNLTSVNDLYLSNNKLTGAMPNLTG--------LSVLSYLDMSNNSFDASEVPSWFS--SM 311 (955)
Q Consensus 257 --------------p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~~p~~~~--~l 311 (955)
|..+ ..+++|+.|+|++|+|+.++..+.. +++|+.|+|++|+|+ .+|..+. .+
T Consensus 675 L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~--~lp~~l~~~~l 752 (876)
T 4ecn_A 675 ASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT--SLSDDFRATTL 752 (876)
T ss_dssp EEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC--CCCGGGSTTTC
T ss_pred cCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc--cchHHhhhccC
Confidence 3322 3455555555555555544443222 125555555555554 3455554 55
Q ss_pred CCCCEEECcCCcceecCCcCCCCCCCCcEEEeec------CcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCCcc
Q 002189 312 QSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKT------NELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPAVN 384 (955)
Q Consensus 312 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~~~ 384 (955)
++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+ .+.+|+.|+|++|+|..++...+..+..
T Consensus 753 ~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~Ip~~l~~~L~~ 831 (876)
T 4ecn_A 753 PYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKVDEKLTPQLYI 831 (876)
T ss_dssp TTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCCCSSSCE
T ss_pred CCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCccCHhhcCCCCE
Confidence 555555555555554 455555555555555544 44555444433 2445555555555555554444433333
Q ss_pred eeEecCc
Q 002189 385 LTLIDNP 391 (955)
Q Consensus 385 L~~l~n~ 391 (955)
|++.+|+
T Consensus 832 LdLs~N~ 838 (876)
T 4ecn_A 832 LDIADNP 838 (876)
T ss_dssp EECCSCT
T ss_pred EECCCCC
Confidence 4443443
No 271
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=335.26 Aligned_cols=107 Identities=24% Similarity=0.281 Sum_probs=65.5
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..+..|..+++|++|+|++|+ +.+..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNR-IQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSC-CCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCc-cCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 456666666666665555566666666666666665 55555666666666666666666666 44444 566666666
Q ss_pred ccCCCCcC-cCCCCCCCCCCcCeeecCCceee
Q 002189 144 LNSNGFSG-RVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 144 Ls~N~l~~-~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
|++|+|++ .+|..|+++++|++|+|++|+++
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccc
Confidence 66666664 34556666666666666666554
No 272
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=334.24 Aligned_cols=324 Identities=20% Similarity=0.218 Sum_probs=199.2
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|++++..+..|.++++|++|+|++|+ +.+..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 130 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP-IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC-CCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEE
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCc-CCccCHhhhcCccccccccccccccccCCCccccccccccEEe
Confidence 355556666666655555556666666666666664 5555555566666666666666666544444466666666666
Q ss_pred ccCCCCcC-cCCCCCCCCCCcCeeecCCceeeeccCCCCCCC--------------------------------------
Q 002189 144 LNSNGFSG-RVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNS-------------------------------------- 184 (955)
Q Consensus 144 Ls~N~l~~-~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~-------------------------------------- 184 (955)
|++|.+++ .+|..|+++++|++|++++|++++..|..++.+
T Consensus 131 L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccc
Confidence 66666654 245666666666666666666554332211110
Q ss_pred -----------------------------------------------------------------Cchhhhhcccccccc
Q 002189 185 -----------------------------------------------------------------PGLDMLVRAKHFHFG 199 (955)
Q Consensus 185 -----------------------------------------------------------------~~l~~L~~L~~L~L~ 199 (955)
..+..+++|+.|+++
T Consensus 211 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~ 290 (570)
T 2z63_A 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290 (570)
T ss_dssp CSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEE
T ss_pred cccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEec
Confidence 011223445555555
Q ss_pred CCcccccCCccccCCccceeeeeccCCCccccCCcc-c-------------------CCCCCCcEEEcccCCCCCCc--c
Q 002189 200 KNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPAT-L-------------------GLVKSLEVVRFDRNSLSGPV--P 257 (955)
Q Consensus 200 ~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~-l-------------------~~l~~L~~L~Ls~N~l~~~~--p 257 (955)
+|+++ .+|..+... +|++|++++|++. .+|.. + ..+++|+.|++++|.+++.. |
T Consensus 291 ~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 366 (570)
T 2z63_A 291 SVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCS 366 (570)
T ss_dssp SCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEE
T ss_pred Cccch-hhhhhhccC--CccEEeeccCccc-ccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccccc
Confidence 55555 454443322 3444444444443 22211 1 45677778888888877443 6
Q ss_pred ccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCC
Q 002189 258 SNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPH 337 (955)
Q Consensus 258 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 337 (955)
..+..+++|+.|+|++|.+++.++.+..+++|++|++++|.+++......+.++++|+.|++++|.+.+..|..+..+++
T Consensus 367 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 446 (570)
T 2z63_A 367 QSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446 (570)
T ss_dssp HHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTT
T ss_pred ccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCc
Confidence 67777788888888888877776667777778888888887765333356777777888888888777777777777778
Q ss_pred CcEEEeecCcce-eeeCCC-cchhhhhhhcccCCccccccCCCCCCCcceeEecCcc
Q 002189 338 LQTVVMKTNELN-GTLDLG-TSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNPI 392 (955)
Q Consensus 338 L~~L~Ls~N~l~-~~~~~~-~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~~ 392 (955)
|++|+|++|+++ +.+|.. ..+.+|+.|+|++|+++++.+..+..+.+|+.++...
T Consensus 447 L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 888888888776 345544 3466677778888887777777777777777766553
No 273
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=329.72 Aligned_cols=318 Identities=20% Similarity=0.206 Sum_probs=246.3
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..+..|.++++|++|+|++|+ +.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~-i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE-IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCC-CCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCc-CCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 478999999999999888999999999999999997 8888889999999999999999999988889999999999999
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeee-ccCCCCCCCCchhhhhccccccccCCcccc-----------------
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEG-EIPVSDGNSPGLDMLVRAKHFHFGKNQLSG----------------- 205 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g-~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g----------------- 205 (955)
|++|++++..+..|+++++|++|+|++|++++ .+|..+++ +++|++|++++|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~ 180 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN------LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG------CTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcc------cCCCCEEeCcCCccceecHHHccchhccchhhh
Confidence 99999997666689999999999999999986 46765544 4445555555555542
Q ss_pred ----------cCCccccCC-------------------------------------------------------------
Q 002189 206 ----------SIPEKLFRP------------------------------------------------------------- 214 (955)
Q Consensus 206 ----------~ip~~~~~~------------------------------------------------------------- 214 (955)
.++...|..
T Consensus 181 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 260 (570)
T 2z63_A 181 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 260 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEE
T ss_pred hcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchh
Confidence 122222221
Q ss_pred --------------------ccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCcccc-c-------------
Q 002189 215 --------------------DMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSN-L------------- 260 (955)
Q Consensus 215 --------------------~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-l------------- 260 (955)
..+|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|.. +
T Consensus 261 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~ 337 (570)
T 2z63_A 261 EFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKG 337 (570)
T ss_dssp EEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBS
T ss_pred hhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcc
Confidence 122333333333333 233334444 4444444444444 22221 1
Q ss_pred ------cCCCCCCEEEccCCcCcccC---CCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCC-c
Q 002189 261 ------NNLTSVNDLYLSNNKLTGAM---PNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIP-A 330 (955)
Q Consensus 261 ------~~l~~L~~L~Ls~N~l~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~ 330 (955)
..+++|+.|++++|.+++.. ..+..+++|++|+|++|.+++ .+..+..+++|+.|++++|.+.+..+ .
T Consensus 338 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 415 (570)
T 2z63_A 338 GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT--MSSNFLGLEQLEHLDFQHSNLKQMSEFS 415 (570)
T ss_dssp CCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE--EEEEEETCTTCCEEECTTSEEESCTTSC
T ss_pred ccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc--ccccccccCCCCEEEccCCccccccchh
Confidence 46788999999999998874 357889999999999999975 45559999999999999999998776 5
Q ss_pred CCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCccc-cccCCCCCCCcceeEecCcch
Q 002189 331 DLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRIS-AYTERGGAPAVNLTLIDNPIC 393 (955)
Q Consensus 331 ~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~-~~~~~~~~~~~~L~~l~n~~c 393 (955)
.+..+++|++|+|++|++++..+..+ .+.+|+.|+|++|+++ +..+..+..+.+|+.++...|
T Consensus 416 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 480 (570)
T 2z63_A 416 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480 (570)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCC
Confidence 78899999999999999999888765 4788999999999998 566777888888887766544
No 274
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.6e-32 Score=329.12 Aligned_cols=318 Identities=18% Similarity=0.187 Sum_probs=161.6
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccc--cccccccccCCCCCCccccC-----
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLS--NLMLVGCSFSGPIPDSIGSL----- 136 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~--~L~Ls~N~l~~~~p~~~~~l----- 136 (955)
.+++.|+|++|.+++...+.+..+++|++|+|++|+ +.+..|..|+.+++|+ .|++++|.+++..|..|...
T Consensus 129 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L 207 (606)
T 3t6q_A 129 KTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA-IHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSL 207 (606)
T ss_dssp TTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC-CCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEE
T ss_pred CcccEEECCCCcccccCcccccCCcccCEEEcccCc-ccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccccc
Confidence 466677777777766444445456677777777665 6655566666666666 56666666655444433211
Q ss_pred ----------------------------------------------CCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCC
Q 002189 137 ----------------------------------------------QELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTD 170 (955)
Q Consensus 137 ----------------------------------------------~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~ 170 (955)
.+|+.|++++|.+++..+..|.++++|++|+|++
T Consensus 208 ~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 287 (606)
T 3t6q_A 208 NFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTA 287 (606)
T ss_dssp ECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTT
T ss_pred ccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccC
Confidence 0455555555555554444555555555555555
Q ss_pred ceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCc-ccCCCCCCcEEEccc
Q 002189 171 NKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPA-TLGLVKSLEVVRFDR 249 (955)
Q Consensus 171 N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~ 249 (955)
|+++ .+|..++. +++|++|++++|+++ .++...+..+++|+.|++++|.+.+.+|. .+..+++|++|++++
T Consensus 288 n~l~-~lp~~l~~------l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 359 (606)
T 3t6q_A 288 THLS-ELPSGLVG------LSTLKKLVLSANKFE-NLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSH 359 (606)
T ss_dssp SCCS-CCCSSCCS------CTTCCEEECTTCCCS-BGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCS
T ss_pred CccC-CCChhhcc------cccCCEEECccCCcC-cCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCC
Confidence 5555 44443322 334445555555555 23223333344455555555555544433 245555555555555
Q ss_pred CCCCCCc--cccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCccee
Q 002189 250 NSLSGPV--PSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKG 326 (955)
Q Consensus 250 N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 326 (955)
|.+++.. +..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|++++...+..+..+++|+.|++++|.+++
T Consensus 360 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 439 (606)
T 3t6q_A 360 DDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDI 439 (606)
T ss_dssp SCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBT
T ss_pred CccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCC
Confidence 5554333 4445555555555555555554443 344455555555555555443333334555555555555555554
Q ss_pred cCCcCCCCCCCCcEEEeecCccee-eeCC---CcchhhhhhhcccCCccccccCCCCCCCcceeEecC
Q 002189 327 QIPADLFSIPHLQTVVMKTNELNG-TLDL---GTSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDN 390 (955)
Q Consensus 327 ~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~---~~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n 390 (955)
..|..+..+++|++|+|++|++++ .++. ...+.+|+.|+|++|+++++.+..+..+.+|+.++.
T Consensus 440 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 507 (606)
T 3t6q_A 440 SSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDL 507 (606)
T ss_dssp TCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEEC
Confidence 445555555555555555555544 1111 122344445555555555555544444444444443
No 275
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.98 E-value=9e-32 Score=322.48 Aligned_cols=306 Identities=17% Similarity=0.175 Sum_probs=250.9
Q ss_pred eEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccC
Q 002189 67 TSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNS 146 (955)
Q Consensus 67 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 146 (955)
+.++++++++++ +|..+. ++|++|+|++|+ +.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~-i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNS-ISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSC-CCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCC-ccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 789999999995 676554 899999999997 8888888999999999999999999988899999999999999999
Q ss_pred CCCcCcCCCCCCCCCCcCeeecCCceeee-ccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccc--eeeeec
Q 002189 147 NGFSGRVPPSIGNLSNLYWLDLTDNKLEG-EIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMV--LIHVLF 223 (955)
Q Consensus 147 N~l~~~~p~~~~~L~~L~~L~L~~N~l~g-~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~--L~~L~L 223 (955)
|+|+ .+|.. .+++|++|+|++|++++ .+|. .+..+++|++|++++|++++ .. +..+.. |+.|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~------~~~~l~~L~~L~L~~n~l~~-~~---~~~l~~L~L~~L~L 176 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCK------EFGNLTKLTFLGLSAAKFRQ-LD---LLPVAHLHLSCILL 176 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCG------GGGGCTTCCEEEEECSBCCT-TT---TGGGTTSCEEEEEE
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchH------hhcccCcccEEecCCCcccc-Cc---hhhhhhceeeEEEe
Confidence 9999 67766 89999999999999984 2333 46667889999999999984 22 233334 499999
Q ss_pred cCCCc--cccCCcccCCCC-------------------------------------------------------------
Q 002189 224 DSNNL--TGELPATLGLVK------------------------------------------------------------- 240 (955)
Q Consensus 224 ~~N~l--~~~~p~~l~~l~------------------------------------------------------------- 240 (955)
++|++ ++..|..+..+.
T Consensus 177 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L 256 (562)
T 3a79_B 177 DLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTL 256 (562)
T ss_dssp EESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEE
T ss_pred ecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEe
Confidence 99988 776666665543
Q ss_pred --------------------CCcEEEcccCCCCCCccccc----------------------------------------
Q 002189 241 --------------------SLEVVRFDRNSLSGPVPSNL---------------------------------------- 260 (955)
Q Consensus 241 --------------------~L~~L~Ls~N~l~~~~p~~l---------------------------------------- 260 (955)
+|++|++++|.++|.+|..+
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L 336 (562)
T 3a79_B 257 QHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKML 336 (562)
T ss_dssp EEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEE
T ss_pred cCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEE
Confidence 67778888888887777655
Q ss_pred -------------cCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCC-CCChhhcCCCCCCEEECcCCcce
Q 002189 261 -------------NNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDAS-EVPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 261 -------------~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~-~~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
..+++|++|+|++|.+++..+ .+.++++|++|+|++|++++. ..|..|.++++|+.|+|++|+++
T Consensus 337 ~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 337 SISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp EEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred EccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 677889999999999998655 688899999999999999752 12466889999999999999999
Q ss_pred ecCCcC-CCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccccCCCCCCCcceeEecCc
Q 002189 326 GQIPAD-LFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNP 391 (955)
Q Consensus 326 ~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~ 391 (955)
+.+|.. +..+++|+.|+|++|++++..+..+. .+|+.|+|++|+|+.+++..+ .+.+|+.++..
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-~~L~~L~L~~N~l~~ip~~~~-~l~~L~~L~L~ 481 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP-PKVKVLDLHNNRIMSIPKDVT-HLQALQELNVA 481 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-TTCSEEECCSSCCCCCCTTTT-SSCCCSEEECC
T ss_pred CccChhhhcCcccCCEEECCCCCCCcchhhhhc-CcCCEEECCCCcCcccChhhc-CCCCCCEEECC
Confidence 856654 77889999999999999887666554 678899999999998888777 67777776654
No 276
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.98 E-value=2.1e-32 Score=324.92 Aligned_cols=314 Identities=20% Similarity=0.176 Sum_probs=214.7
Q ss_pred eEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccC
Q 002189 67 TSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNS 146 (955)
Q Consensus 67 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 146 (955)
+.||+++|+++ .+|..+. ++|++|+|++|+ +.+..|..|.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~-i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNY-ISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSC-CCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCc-ccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 47899999999 5777666 899999999997 8888888999999999999999999988899999999999999999
Q ss_pred CCCcCcCCCCCCCCCCcCeeecCCceeee-ccCCCCCCCCchhh---------------hhcc--ccccccCCcc--ccc
Q 002189 147 NGFSGRVPPSIGNLSNLYWLDLTDNKLEG-EIPVSDGNSPGLDM---------------LVRA--KHFHFGKNQL--SGS 206 (955)
Q Consensus 147 N~l~~~~p~~~~~L~~L~~L~L~~N~l~g-~ip~~~~~~~~l~~---------------L~~L--~~L~L~~N~l--~g~ 206 (955)
|+|+ .+|.. .+++|++|+|++|++++ .+|..++.++.|+. +.+| +.|++++|++ ++.
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~ 155 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKE 155 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSC
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeeccccccccc
Confidence 9999 67766 89999999999999986 46666555443322 1233 4445555544 333
Q ss_pred CCccccC-------------------------Ccc---------------------------------------------
Q 002189 207 IPEKLFR-------------------------PDM--------------------------------------------- 216 (955)
Q Consensus 207 ip~~~~~-------------------------~~~--------------------------------------------- 216 (955)
+|..+.. .+.
T Consensus 156 ~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~ 235 (520)
T 2z7x_B 156 DPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWN 235 (520)
T ss_dssp CTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHH
T ss_pred ccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHH
Confidence 3332221 011
Q ss_pred ------------ceeeeeccCCCccccCCccc-----CCCCCCcEEEcccCCCCCCcc-cc-------------------
Q 002189 217 ------------VLIHVLFDSNNLTGELPATL-----GLVKSLEVVRFDRNSLSGPVP-SN------------------- 259 (955)
Q Consensus 217 ------------~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~------------------- 259 (955)
+|++|++++|+++|.+|..+ ..+++|+.+++++|.+ .+| ..
T Consensus 236 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~ 313 (520)
T 2z7x_B 236 SFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTR 313 (520)
T ss_dssp HHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSC
T ss_pred HHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCc
Confidence 34444444444544555544 4444444444444443 112 00
Q ss_pred ------ccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCC-CCChhhcCCCCCCEEECcCCcceecCCcC
Q 002189 260 ------LNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDAS-EVPSWFSSMQSLTTLMMENTNLKGQIPAD 331 (955)
Q Consensus 260 ------l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 331 (955)
+..+++|++|+|++|++++..+ .+..+++|++|+|++|++++. .+|..+..+++|+.|+|++|.+++.+|..
T Consensus 314 l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~ 393 (520)
T 2z7x_B 314 MVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG 393 (520)
T ss_dssp CCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC
T ss_pred cccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccc
Confidence 1566777777777777777444 567777777777777777531 23456777777777777777777655554
Q ss_pred -CCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccccCCCCCCCcceeEecCc
Q 002189 332 -LFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNP 391 (955)
Q Consensus 332 -~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~ 391 (955)
+..+++|+.|+|++|++++..+..+. .+++.|+|++|+|+.++...+ .+.+|+.++..
T Consensus 394 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~l~~ip~~~~-~l~~L~~L~L~ 452 (520)
T 2z7x_B 394 DCSWTKSLLSLNMSSNILTDTIFRCLP-PRIKVLDLHSNKIKSIPKQVV-KLEALQELNVA 452 (520)
T ss_dssp SCCCCTTCCEEECCSSCCCGGGGGSCC-TTCCEEECCSSCCCCCCGGGG-GCTTCCEEECC
T ss_pred hhccCccCCEEECcCCCCCcchhhhhc-ccCCEEECCCCcccccchhhh-cCCCCCEEECC
Confidence 66677777777777777765555443 566777777777776666544 55555555544
No 277
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.98 E-value=1.5e-31 Score=328.30 Aligned_cols=321 Identities=19% Similarity=0.173 Sum_probs=178.1
Q ss_pred CEeEEEecCCcCccccCcCcCCCCc--ccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCcccc-------
Q 002189 65 RVTSITLSGMGLKGQLSGDITGLTE--LHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGS------- 135 (955)
Q Consensus 65 ~v~~L~L~~~~l~~~~~~~l~~l~~--L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------- 135 (955)
.++.|+|++|.+++..+..|..++. |++|+|++|+ +.+..|..|+++++|++|+|++|++++..|..|..
T Consensus 223 ~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 223 SIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNN-LNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSC-CCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred cccEEEccCCcccccChhHhhccCcCCCCEEECCCCC-cCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 3444555555555544444444433 5555555553 44444444555555555555555555444444444
Q ss_pred --------------------------CCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeec-cCCCCCCCCchh
Q 002189 136 --------------------------LQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGE-IPVSDGNSPGLD 188 (955)
Q Consensus 136 --------------------------l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~-ip~~~~~~~~l~ 188 (955)
+++|++|+|++|++++..+..|.++++|++|+|++|.+++. ++... +..+
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~--f~~~- 378 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET--FVSL- 378 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTT--TGGG-
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhh--hccc-
Confidence 45555555555555544444455555555555554443211 11000 0000
Q ss_pred hhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCC-cccCCCCCCcEEEcccCCCCCCccccccCCCCCC
Q 002189 189 MLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELP-ATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVN 267 (955)
Q Consensus 189 ~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 267 (955)
...+|+.|++++|+++ .++...|..+.+|+.|+|++|++++.+| ..|..+++|++|++++|++.+..+..|..+++|+
T Consensus 379 ~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~ 457 (680)
T 1ziw_A 379 AHSPLHILNLTKNKIS-KIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQ 457 (680)
T ss_dssp TTSCCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCC
T ss_pred ccCcCceEECCCCCCC-eEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccc
Confidence 0124566666666666 3333445556666666666666666554 4566666666666666666656666666666666
Q ss_pred EEEccCCcCcc--c-CCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCC--------cCCCCCC
Q 002189 268 DLYLSNNKLTG--A-MPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIP--------ADLFSIP 336 (955)
Q Consensus 268 ~L~Ls~N~l~~--~-~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~ 336 (955)
.|++++|.+++ . +..+..+++|++|+|++|++++ ..+..|.++++|+.|+|++|++++..+ ..+..++
T Consensus 458 ~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~ 536 (680)
T 1ziw_A 458 RLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN-INDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLS 536 (680)
T ss_dssp EEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCT
T ss_pred cchhccccccccccCCcccccCCCCCEEECCCCCCCc-CChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCC
Confidence 66666666652 2 2246666667777777776664 445556666777777777776664321 2255666
Q ss_pred CCcEEEeecCcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCCcceeEecCc
Q 002189 337 HLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNP 391 (955)
Q Consensus 337 ~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~ 391 (955)
+|++|+|++|+++..++..+ .+.+|+.|+|++|+|+++++..|..+.+|+.++..
T Consensus 537 ~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~ 592 (680)
T 1ziw_A 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQ 592 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECC
Confidence 77777777777765544433 35566667777777776666666666666655544
No 278
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=2.8e-32 Score=301.68 Aligned_cols=242 Identities=25% Similarity=0.449 Sum_probs=179.8
Q ss_pred CcccEEecCCCCCCcc--CCCCCcccccccccccccc-cccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcC
Q 002189 88 TELHTLDLSNNKDLRG--PLPTTIGNLKKLSNLMLVG-CSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLY 164 (955)
Q Consensus 88 ~~L~~L~Ls~N~~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~ 164 (955)
.+++.|+|++|+ +.+ .+|..|.++++|++|+|++ |++.+.+|..|+++++|++|+|++|+|++.+|..|.++++|+
T Consensus 50 ~~l~~L~L~~~~-l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLN-LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCC-CSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCC-ccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 578889999886 777 7888888888888888885 888888888888888888888888888888888888888888
Q ss_pred eeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcE
Q 002189 165 WLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEV 244 (955)
Q Consensus 165 ~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 244 (955)
+|+|++|++++.+| ..+..+++|++
T Consensus 129 ~L~Ls~N~l~~~~p-------------------------------------------------------~~~~~l~~L~~ 153 (313)
T 1ogq_A 129 TLDFSYNALSGTLP-------------------------------------------------------PSISSLPNLVG 153 (313)
T ss_dssp EEECCSSEEESCCC-------------------------------------------------------GGGGGCTTCCE
T ss_pred EEeCCCCccCCcCC-------------------------------------------------------hHHhcCCCCCe
Confidence 88888888874444 23334445555
Q ss_pred EEcccCCCCCCccccccCCC-CCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCC
Q 002189 245 VRFDRNSLSGPVPSNLNNLT-SVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENT 322 (955)
Q Consensus 245 L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 322 (955)
|+|++|.+++.+|..+..++ +|+.|+|++|++++..+ .+..++ |++|+|++|.+++ ..|..|..+++|+.|+|++|
T Consensus 154 L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N 231 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG-DASVLFGSDKNTQKIHLAKN 231 (313)
T ss_dssp EECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE-CCGGGCCTTSCCSEEECCSS
T ss_pred EECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC-cCCHHHhcCCCCCEEECCCC
Confidence 55555555555555555554 55555555555554444 344444 6666666666654 46677788888888888888
Q ss_pred cceecCCcCCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCCcceeEec
Q 002189 323 NLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPAVNLTLID 389 (955)
Q Consensus 323 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~ 389 (955)
.+++.+|. +..+++|++|+|++|++++.+|..+ .+.+|+.|+|++|+|++..|.. ..+.+|+.++
T Consensus 232 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~ 297 (313)
T 1ogq_A 232 SLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSA 297 (313)
T ss_dssp EECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGG
T ss_pred ceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHH
Confidence 88866666 7889999999999999999888765 4778889999999999877765 5555555443
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.5e-31 Score=296.72 Aligned_cols=277 Identities=20% Similarity=0.287 Sum_probs=129.1
Q ss_pred CCCCCccEEeCC-----------CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccc
Q 002189 52 CGDNWEGIGCTN-----------SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLML 120 (955)
Q Consensus 52 C~~~w~gv~C~~-----------~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~L 120 (955)
|.|.|..+.|+. .+++.|+|++|.+++..+..|.++++|++|+|++|+ +.+..|..|.++++|++|+|
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNK-ISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC-CCEECGGGSTTCTTCCEEEC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCc-cCccCHhHhhCcCCCCEEEC
Confidence 444566666642 234455555555554444455555555555555553 44444455555555555555
Q ss_pred cccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeee--ccCCCCCCCCchhhhhccccccc
Q 002189 121 VGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEG--EIPVSDGNSPGLDMLVRAKHFHF 198 (955)
Q Consensus 121 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g--~ip~~~~~~~~l~~L~~L~~L~L 198 (955)
++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+++. ..|..+.. + +|+.|++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~------l-~L~~L~l 179 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG------L-KLNYLRI 179 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS------C-CCSCCBC
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC------C-ccCEEEC
Confidence 555554 3343333 445555555555553333344555555555555555531 22222211 1 3444455
Q ss_pred cCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcc
Q 002189 199 GKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTG 278 (955)
Q Consensus 199 ~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 278 (955)
++|+++ .+|..++ ++|++|+|++|.+++..+..|..+++|+.|+|++|.+++
T Consensus 180 ~~n~l~-~l~~~~~---------------------------~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 180 SEAKLT-GIPKDLP---------------------------ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp CSSBCS-SCCSSSC---------------------------SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred cCCCCC-ccCcccc---------------------------CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 555554 3444333 344455555555544444445555555555555555554
Q ss_pred cCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCC------CCCCcEEEeecCcce--
Q 002189 279 AMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFS------IPHLQTVVMKTNELN-- 349 (955)
Q Consensus 279 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~-- 349 (955)
.++ .+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|.. .++|+.|+|++|++.
T Consensus 232 ~~~~~~~~l~~L~~L~L~~N~l~--~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 232 IENGSLSFLPTLRELHLDNNKLS--RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp CCTTGGGGCTTCCEEECCSSCCC--BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred CChhHhhCCCCCCEEECCCCcCe--ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 444 2444455555555555553 24444555555555555555555443333332 234555555555554
Q ss_pred eeeCCCc-chhhhhhhcccCC
Q 002189 350 GTLDLGT-SYSENLLVNLQNN 369 (955)
Q Consensus 350 ~~~~~~~-~~~~l~~L~L~~N 369 (955)
+..+..+ .+..++.++|++|
T Consensus 310 ~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 310 EVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp GSCGGGGTTBCCSTTEEC---
T ss_pred ccCcccccccchhhhhhcccc
Confidence 2333322 2334445555554
No 280
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=5.7e-31 Score=293.52 Aligned_cols=285 Identities=22% Similarity=0.284 Sum_probs=168.6
Q ss_pred EEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCC
Q 002189 68 SITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSN 147 (955)
Q Consensus 68 ~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 147 (955)
.+++++++++ .+|..+. +.|+.|+|++|+ +++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 35 ~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 35 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNK-ITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EEECTTSCCC-SCCCSCC--TTCCEEECCSSC-CCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred EEEecCCCcc-ccCccCC--CCCeEEECCCCc-CCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 3344444444 3333332 456666666665 55555556666666666666666666555666666666666666666
Q ss_pred CCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccc-cCCccccCCccceeeeeccCC
Q 002189 148 GFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSG-SIPEKLFRPDMVLIHVLFDSN 226 (955)
Q Consensus 148 ~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g-~ip~~~~~~~~~L~~L~L~~N 226 (955)
+|+ .+|..+. ++|++|++++|++++..+.. +..+++|+.|++++|+++. .+....+..+++|+.|++++|
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~------~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n 181 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEITKVRKSV------FNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT 181 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCCBBCHHH------HTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSS
T ss_pred cCC-ccChhhc--ccccEEECCCCcccccCHhH------hcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCC
Confidence 666 4444443 56666666666665332221 3344555666666666641 133344455566666666666
Q ss_pred CccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCC
Q 002189 227 NLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVP 305 (955)
Q Consensus 227 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p 305 (955)
+++. +|..+. ++|++|++++|.+++..|..|..+++|+.|+|++|.+++.++ .+..+++|++|+|++|+++ .+|
T Consensus 182 ~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~lp 256 (330)
T 1xku_A 182 NITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV--KVP 256 (330)
T ss_dssp CCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS--SCC
T ss_pred cccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc--cCC
Confidence 6663 444332 567777777777776666667777777777777777776665 4666677777777777775 366
Q ss_pred hhhcCCCCCCEEECcCCcceecCCcCCCC------CCCCcEEEeecCccee--eeCCCcc-hhhhhhhcccCCc
Q 002189 306 SWFSSMQSLTTLMMENTNLKGQIPADLFS------IPHLQTVVMKTNELNG--TLDLGTS-YSENLLVNLQNNR 370 (955)
Q Consensus 306 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~~~~~~-~~~l~~L~L~~N~ 370 (955)
.++..+++|+.|+|++|+|++..+..|.. .+.|+.|+|++|++.. ..|..+. +..+..++|++|+
T Consensus 257 ~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 66677777777777777777555555543 3567777777777754 3333333 4456677777764
No 281
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=5.9e-32 Score=300.96 Aligned_cols=272 Identities=17% Similarity=0.248 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHhhcCCCC---CCCCC----CCCCCCCCCccEEeCC----------CCEeEEEecCCcCccccCcCcCCC
Q 002189 25 DNDFVILKALKDDIWENE---PPNWK----NNDPCGDNWEGIGCTN----------SRVTSITLSGMGLKGQLSGDITGL 87 (955)
Q Consensus 25 ~~~~~~L~~~k~~~~~~~---~~~w~----~~~~C~~~w~gv~C~~----------~~v~~L~L~~~~l~~~~~~~l~~l 87 (955)
.+|..+|++||+++..+. ...|. ....| |.|.|+.|.. .+|+.|+|++|+++ .+|..+..+
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~-~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l 103 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQI-ETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRL 103 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTS-CCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGG
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccccccccc-cccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhC
Confidence 578999999999774332 35673 23333 3699999952 56777777777766 556666666
Q ss_pred CcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeee
Q 002189 88 TELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLD 167 (955)
Q Consensus 88 ~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 167 (955)
++|++|+|++|+ +. .+|..|+++++|++|+|++|+++ .+|..|+++++|++|+|++|++.+.+|..+... .
T Consensus 104 ~~L~~L~L~~n~-l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------~ 174 (328)
T 4fcg_A 104 SHLQHMTIDAAG-LM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST------D 174 (328)
T ss_dssp TTCSEEEEESSC-CC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE------C
T ss_pred CCCCEEECCCCC-cc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc------c
Confidence 666666666665 44 56666666666666666666666 556666666666666666666555555544330 0
Q ss_pred cCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEc
Q 002189 168 LTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRF 247 (955)
Q Consensus 168 L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 247 (955)
+. ..+. .+.+|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 175 -----~~----------~~~~-------------------------~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L 213 (328)
T 4fcg_A 175 -----AS----------GEHQ-------------------------GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKI 213 (328)
T ss_dssp ------C----------CCEE-------------------------ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEE
T ss_pred -----ch----------hhhc-------------------------cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEc
Confidence 00 0011 1223444444444444 55556667777777777
Q ss_pred ccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCccee
Q 002189 248 DRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKG 326 (955)
Q Consensus 248 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 326 (955)
++|.++ .+|..+..+++|+.|+|++|.+.+..| .+.++++|++|+|++|++.+ .+|..+.++++|+.|+|++|++.+
T Consensus 214 ~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 214 RNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp ESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCC-BCCTTGGGCTTCCEEECTTCTTCC
T ss_pred cCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchh-hcchhhhcCCCCCEEeCCCCCchh
Confidence 777777 456667777777777777777776665 46777778888888877765 677778888888888888888888
Q ss_pred cCCcCCCCCCCCcEEEeecCccee
Q 002189 327 QIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 327 ~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
.+|..+.++++|+.+++..|.+..
T Consensus 292 ~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 292 RLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CCCGGGGGSCTTCEEECCGGGSCC
T ss_pred hccHHHhhccCceEEeCCHHHHHH
Confidence 888888888888888888776653
No 282
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=1.3e-31 Score=320.31 Aligned_cols=314 Identities=18% Similarity=0.189 Sum_probs=233.8
Q ss_pred EeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCC
Q 002189 60 GCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQEL 139 (955)
Q Consensus 60 ~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 139 (955)
.|....+ .|+++++++ .+|..+. ++|++|+|++|+ +.+..|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 3 ~C~~~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 3 SCDASGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNK-ITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp EECTTSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSC-CCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCCce--EECCCCccc-cccccCC--CCccEEECcCCc-cCccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 5776665 799999999 5666554 799999999997 898889999999999999999999998888999999999
Q ss_pred cEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeee-ccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccce
Q 002189 140 VLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEG-EIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVL 218 (955)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g-~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L 218 (955)
++|+|++|++++..|..|+++++|++|+|++|++++ .+|.. +..+++|++|++++|++.+.+|...+..+++|
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~------~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L 150 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSL------FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSL 150 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCS------CTTCTTCCEEEEEESSSCCEECTTTTTTCCEE
T ss_pred CEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhh------hhccCCccEEECCCCccccccCHhhhhccccc
Confidence 999999999998777779999999999999999985 24444 44567789999999997668998888889999
Q ss_pred eeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCcccc-ccCCCCCCEEEccCCcCcccCC---CC-----------
Q 002189 219 IHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSN-LNNLTSVNDLYLSNNKLTGAMP---NL----------- 283 (955)
Q Consensus 219 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~~---~~----------- 283 (955)
++|++++|++++..|..+..+++|+.|+++.|.+. .+|.. +..+++|+.|+|++|++++... .+
T Consensus 151 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~ 229 (549)
T 2z81_A 151 NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLA 229 (549)
T ss_dssp EEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEE
T ss_pred CeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccccee
Confidence 99999999999999999988777777777777765 33333 3456666666666666665310 00
Q ss_pred ------------------------------------------------C-----------------------------CC
Q 002189 284 ------------------------------------------------T-----------------------------GL 286 (955)
Q Consensus 284 ------------------------------------------------~-----------------------------~l 286 (955)
. ..
T Consensus 230 l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~ 309 (549)
T 2z81_A 230 FRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLL 309 (549)
T ss_dssp EESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHS
T ss_pred ccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhc
Confidence 0 01
Q ss_pred CCCCEEECcCCCCCCCCCChhh-cCCCCCCEEECcCCcceecCC---cCCCCCCCCcEEEeecCcceeeeC---CCcchh
Q 002189 287 SVLSYLDMSNNSFDASEVPSWF-SSMQSLTTLMMENTNLKGQIP---ADLFSIPHLQTVVMKTNELNGTLD---LGTSYS 359 (955)
Q Consensus 287 ~~L~~L~Ls~N~l~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~~ 359 (955)
++|+.|++++|.++ .+|..+ ..+++|+.|+|++|++++.+| ..+..+++|+.|+|++|++++..+ ....+.
T Consensus 310 ~~L~~L~l~~n~l~--~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~ 387 (549)
T 2z81_A 310 EKVKRITVENSKVF--LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK 387 (549)
T ss_dssp TTCCEEEEESSCCC--CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT
T ss_pred ccceEEEeccCccc--cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCC
Confidence 34555666666654 355544 467777777777777776553 336667777777777777766442 234456
Q ss_pred hhhhhcccCCccccccCCCCCCCcceeEec
Q 002189 360 ENLLVNLQNNRISAYTERGGAPAVNLTLID 389 (955)
Q Consensus 360 ~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~ 389 (955)
+|+.|+|++|+|+.++.. +..+.+|+.++
T Consensus 388 ~L~~L~Ls~N~l~~lp~~-~~~~~~L~~L~ 416 (549)
T 2z81_A 388 NLTSLDISRNTFHPMPDS-CQWPEKMRFLN 416 (549)
T ss_dssp TCCEEECTTCCCCCCCSC-CCCCTTCCEEE
T ss_pred CCCEEECCCCCCccCChh-hcccccccEEE
Confidence 666777777777765543 33334444443
No 283
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=1.1e-30 Score=317.40 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=118.2
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
..++.|||++|.|+++.+..|.++++|++|+|++|+ +.++.|.+|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~-i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE-IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC-CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc-CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 478999999999998888899999999999999997 8888889999999999999999999977777899999999999
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeec-cCCCCCCCCchhhhhccccccccCCcccc
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGE-IPVSDGNSPGLDMLVRAKHFHFGKNQLSG 205 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~-ip~~~~~~~~l~~L~~L~~L~L~~N~l~g 205 (955)
|++|+|++..+..|+++++|++|+|++|++++. +|.. +..+++|++|+|++|+|++
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~------~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY------FSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG------GGGCTTCCEEECCSSCCCE
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchh------hccchhhhhhcccCccccc
Confidence 999999987777899999999999999999742 3433 4456667777777777763
No 284
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=5.4e-31 Score=330.39 Aligned_cols=314 Identities=19% Similarity=0.157 Sum_probs=259.3
Q ss_pred EEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCC-CCccccCCCCcEEEccC
Q 002189 68 SITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPI-PDSIGSLQELVLLSLNS 146 (955)
Q Consensus 68 ~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~ 146 (955)
..+.++++++. +|. ..++|++|||++|+ +++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 8 ~~dcs~~~L~~-vP~---lp~~l~~LdLs~N~-i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 8 IAFYRFCNLTQ-VPQ---VLNTTERLLLSFNY-IRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEESCCCSSC-CCS---SCTTCCEEEEESCC-CCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred EEEccCCCCCC-CCC---CCCCcCEEECCCCc-CCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 45677888884 454 55899999999997 99999999999999999999999776666 78899999999999999
Q ss_pred CCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCC
Q 002189 147 NGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSN 226 (955)
Q Consensus 147 N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N 226 (955)
|+|++..|..|.++++|++|+|++|++++.+|.. ..+..+++|++|+|++|++++..+...|..+++|++|+|++|
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~----~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N 158 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKD----GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSN 158 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTT----CCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESS
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccC----ccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCC
Confidence 9999988999999999999999999999766654 124457788999999999996666677888999999999999
Q ss_pred CccccCCcccCCC--CCCcEEEcccCCCCCCccccccCCCC------CCEEEccCCcCcccCCC----------------
Q 002189 227 NLTGELPATLGLV--KSLEVVRFDRNSLSGPVPSNLNNLTS------VNDLYLSNNKLTGAMPN---------------- 282 (955)
Q Consensus 227 ~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~~~---------------- 282 (955)
++++..+..+..+ ++|+.|+|+.|.+.+..|..+..+++ |+.|+|++|.+++..+.
T Consensus 159 ~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l 238 (844)
T 3j0a_A 159 QIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLIL 238 (844)
T ss_dssp CCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEEC
T ss_pred cCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceec
Confidence 9999999888877 88999999999998888877776665 88888888877654331
Q ss_pred ---------------------CCC--CCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCc
Q 002189 283 ---------------------LTG--LSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQ 339 (955)
Q Consensus 283 ---------------------~~~--l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 339 (955)
+.+ .++|+.|+|++|.+++ ..+..|..+++|+.|+|++|++++..|..|..+++|+
T Consensus 239 ~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 317 (844)
T 3j0a_A 239 AHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFS-LNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQ 317 (844)
T ss_dssp CSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCE-ECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCC
T ss_pred ccccccccccccccCCCChhhhhccccCCccEEECCCCcccc-cChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCC
Confidence 111 2678888888888875 5677788888888888888888888888888888888
Q ss_pred EEEeecCcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCCcceeEecCc
Q 002189 340 TVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPAVNLTLIDNP 391 (955)
Q Consensus 340 ~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~ 391 (955)
+|+|++|++++..+..+ .+.+|+.|+|++|+|+.+++..+..+.+|+.++..
T Consensus 318 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 318 VLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp EEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred EEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 88888888888766554 47778888888888888888777766666665443
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=3.5e-30 Score=294.18 Aligned_cols=286 Identities=17% Similarity=0.183 Sum_probs=240.4
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..+..|..+++|++|+|++|+ +.+..|..|+++++|++|+|++|+++...+..|.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNA-IRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCC-CCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 589999999999998888899999999999999997 8888889999999999999999999955555579999999999
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF 223 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 223 (955)
|++|++++..|..|.++++|++|+|++|++++. .+..+++|+.|++++|.+++ ++ ....|+.|++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---------~~~~l~~L~~L~l~~n~l~~-~~-----~~~~L~~L~l 212 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---------DLSLIPSLFHANVSYNLLST-LA-----IPIAVEELDA 212 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---------CGGGCTTCSEEECCSSCCSE-EE-----CCSSCSEEEC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc---------ccccccccceeecccccccc-cC-----CCCcceEEEC
Confidence 999999988888999999999999999999842 25567788888999998873 32 2346888999
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDAS 302 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~ 302 (955)
++|++... |. ...++|+.|++++|.+++. ..+..+++|+.|+|++|.+++.++ .+..+++|++|+|++|++++
T Consensus 213 ~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~- 286 (390)
T 3o6n_A 213 SHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA- 286 (390)
T ss_dssp CSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-
T ss_pred CCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-
Confidence 99988855 33 2347889999999998853 578888999999999999988866 57888999999999998865
Q ss_pred CCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCcccccc
Q 002189 303 EVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYT 375 (955)
Q Consensus 303 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~ 375 (955)
++..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+... ...+.+|+.|+|++|++++..
T Consensus 287 -~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 287 -LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp -EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred -cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccchh
Confidence 5666778889999999999888 56777778889999999999988764 445667888999999988643
No 286
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=3e-30 Score=301.90 Aligned_cols=279 Identities=23% Similarity=0.382 Sum_probs=130.5
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..+ +..+++|++|+|++|+ +.+..+ +.++++|++|+|++|.+++. +. +..+++|++|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~-l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 140 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ-IADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLE 140 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCc-cccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEE
Confidence 355556666655554432 5555556666665554 443332 55555555555555555532 22 55555555555
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF 223 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 223 (955)
|++|.+++ ++ .+..+++|+.|+++ |.+. ....+..+++|+.|++++|+++ .++. +..+++|++|++
T Consensus 141 l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~--------~~~~~~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~l 206 (466)
T 1o6v_A 141 LSSNTISD-IS-ALSGLTSLQQLSFG-NQVT--------DLKPLANLTTLERLDISSNKVS-DISV--LAKLTNLESLIA 206 (466)
T ss_dssp EEEEEECC-CG-GGTTCTTCSEEEEE-ESCC--------CCGGGTTCTTCCEEECCSSCCC-CCGG--GGGCTTCSEEEC
T ss_pred CCCCccCC-Ch-hhccCCcccEeecC-Cccc--------CchhhccCCCCCEEECcCCcCC-CChh--hccCCCCCEEEe
Confidence 55555553 21 12222222222221 1111 0111333445555555555554 2221 333445555555
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASE 303 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 303 (955)
++|++.+..| ++.+++|+.|++++|.+++ + ..+..+++|+.|++++|.+++.++ +..+++|++|+|++|.+++
T Consensus 207 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-- 279 (466)
T 1o6v_A 207 TNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISN-- 279 (466)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCC--
T ss_pred cCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCc--
Confidence 5555554433 4445555555555555542 1 234445555555555555544433 4444555555555555543
Q ss_pred CChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccc
Q 002189 304 VPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAY 374 (955)
Q Consensus 304 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~ 374 (955)
.+. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..+ ...+.+|+.|++++|+++++
T Consensus 280 ~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 280 ISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC
T ss_pred ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc
Confidence 222 4445555555555555543222 3444555555555555544433 22344444455555554444
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=4.3e-30 Score=309.89 Aligned_cols=285 Identities=17% Similarity=0.176 Sum_probs=241.5
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.+++..+..|..+++|++|+|++|. +.+..|..|+++++|++|+|++|.|++..+..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNA-IRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCc-CCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 589999999999999888999999999999999997 9998888999999999999999999966666689999999999
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF 223 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 223 (955)
|++|.|++..|..|.++++|++|+|++|++++. + +..+++|+.|++++|.+++ + .....|+.|++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--------~~~l~~L~~L~l~~n~l~~-l-----~~~~~L~~L~l 218 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--------LSLIPSLFHANVSYNLLST-L-----AIPIAVEELDA 218 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--------GGGCTTCSEEECCSSCCSE-E-----ECCTTCSEEEC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C--------hhhhhhhhhhhcccCcccc-c-----cCCchhheeec
Confidence 999999998888999999999999999999843 2 4556778888999998873 2 23456888999
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDAS 302 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~ 302 (955)
++|.+....+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.|++.++ .+..+++|++|+|++|.+++
T Consensus 219 s~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~- 292 (597)
T 3oja_B 219 SHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA- 292 (597)
T ss_dssp CSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-
T ss_pred cCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-
Confidence 999888544332 3688899999999885 4678888999999999999988866 57888899999999998875
Q ss_pred CCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccc
Q 002189 303 EVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAY 374 (955)
Q Consensus 303 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~ 374 (955)
+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++.. ...+..|..|+|++|++++.
T Consensus 293 -l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 293 -LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp -EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred -CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCCh
Confidence 5777778889999999999988 67777888889999999999988764 34466788899999988864
No 288
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.8e-30 Score=288.28 Aligned_cols=283 Identities=23% Similarity=0.305 Sum_probs=213.3
Q ss_pred CEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEc
Q 002189 65 RVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSL 144 (955)
Q Consensus 65 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 144 (955)
+++.+++++++++ .+|..+. ++|+.|+|++|+ +.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNND-ISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCc-CCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 3456677777766 4454442 566667777665 56555666666666666666666666555666666666666666
Q ss_pred cCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeecc
Q 002189 145 NSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFD 224 (955)
Q Consensus 145 s~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~ 224 (955)
++|+|+ .+|..+. ++|++|+|++|+++ .+|...+..+++|+.|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~-------------------------------~~~~~~~~~l~~L~~L~l~ 155 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIR-------------------------------KVPKGVFSGLRNMNCIEMG 155 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCC-------------------------------CCCSGGGSSCSSCCEEECC
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccC-------------------------------ccCHhHhCCCccCCEEECC
Confidence 666666 4444443 55666666655555 4555556666677777777
Q ss_pred CCCcc--ccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCC
Q 002189 225 SNNLT--GELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDA 301 (955)
Q Consensus 225 ~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 301 (955)
+|+++ +..+..+..+ +|+.|++++|.++ .+|..+. ++|+.|+|++|.+++.++ .+..+++|++|+|++|++++
T Consensus 156 ~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 156 GNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp SCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred CCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 77775 3667788888 9999999999999 4676654 799999999999999886 68899999999999999986
Q ss_pred CCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-------hhhhhhhcccCCccc--
Q 002189 302 SEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-------YSENLLVNLQNNRIS-- 372 (955)
Q Consensus 302 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-------~~~l~~L~L~~N~l~-- 372 (955)
..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..+. ...+..|++++|++.
T Consensus 232 -~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 232 -IENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp -CCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred -CChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 56678999999999999999999 8999999999999999999999998776553 345678999999998
Q ss_pred cccCCCCCCCcceeEecCc
Q 002189 373 AYTERGGAPAVNLTLIDNP 391 (955)
Q Consensus 373 ~~~~~~~~~~~~L~~l~n~ 391 (955)
++.+..|..+.+|+.++..
T Consensus 310 ~~~~~~~~~l~~L~~l~l~ 328 (332)
T 2ft3_A 310 EVQPATFRCVTDRLAIQFG 328 (332)
T ss_dssp GSCGGGGTTBCCSTTEEC-
T ss_pred ccCcccccccchhhhhhcc
Confidence 7777888877777776654
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4e-30 Score=283.44 Aligned_cols=286 Identities=21% Similarity=0.228 Sum_probs=221.7
Q ss_pred CCCCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCC--
Q 002189 50 DPCGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSG-- 127 (955)
Q Consensus 50 ~~C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-- 127 (955)
+.|.|.|.+|.|+... ++ .+|..+ .++|++|+|++|+ +....+..|.++++|++|+|++|+++.
T Consensus 3 ~~C~C~~~~l~c~~~~----------l~-~ip~~~--~~~l~~L~L~~n~-l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKG----------LT-SVPTGI--PSSATRLELESNK-LQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TTCEEETTEEECCSSC----------CS-SCCSCC--CTTCCEEECCSSC-CCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCCeeCCCEEEcCCCC----------cc-cCCCCC--CCCCCEEECCCCc-cCccCHhHhhccccCCEEECCCCccCccc
Confidence 4577788888887544 44 334433 2689999999997 775555568999999999999999883
Q ss_pred CCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccC
Q 002189 128 PIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSI 207 (955)
Q Consensus 128 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~i 207 (955)
..+..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+
T Consensus 69 ~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~----------------------------- 118 (306)
T 2z66_A 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSE----------------------------- 118 (306)
T ss_dssp EEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTT-----------------------------
T ss_pred CcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCccccccc-----------------------------
Confidence 23667778899999999999998 577778899999999999999883222
Q ss_pred CccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCC-CccccccCCCCCCEEEccCCcCcccCC-CCCC
Q 002189 208 PEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSG-PVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTG 285 (955)
Q Consensus 208 p~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~ 285 (955)
...+..+++|++|++++|++.+..+..+..+++|++|+|++|.+++ .+|..+..+++|+.|+|++|.+++.++ .+..
T Consensus 119 -~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 197 (306)
T 2z66_A 119 -FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 197 (306)
T ss_dssp -TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred -chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcC
Confidence 0223334456666666666666777778888999999999999886 578889999999999999999998866 5788
Q ss_pred CCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCC-CCcEEEeecCcceeeeCCC--cc-hhhh
Q 002189 286 LSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIP-HLQTVVMKTNELNGTLDLG--TS-YSEN 361 (955)
Q Consensus 286 l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~--~~-~~~l 361 (955)
+++|++|+|++|++++ ..+..+..+++|+.|+|++|++++..|..+..++ +|+.|+|++|++++..+.. .. +...
T Consensus 198 l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~ 276 (306)
T 2z66_A 198 LSSLQVLNMSHNNFFS-LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQ 276 (306)
T ss_dssp CTTCCEEECTTSCCSB-CCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHT
T ss_pred CCCCCEEECCCCccCc-cChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhh
Confidence 9999999999999976 5566789999999999999999999999999985 9999999999999865432 22 2234
Q ss_pred hhhcccCCccccccCCCCCC
Q 002189 362 LLVNLQNNRISAYTERGGAP 381 (955)
Q Consensus 362 ~~L~L~~N~l~~~~~~~~~~ 381 (955)
..+.+..+.+.+..|....+
T Consensus 277 ~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 277 RQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp GGGBSCGGGCBEEESGGGTT
T ss_pred hhhhccccccccCCchhhCC
Confidence 45666777777766654443
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=6.2e-30 Score=287.16 Aligned_cols=296 Identities=22% Similarity=0.320 Sum_probs=210.7
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+++++.+... + .+..+++|++|+|++|+ +.+..+ +.++++|++|+|++|.++. ++ .+..+++|++|+
T Consensus 44 ~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~-i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 44 ESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQ-ITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp TTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred ccccEEEEeCCccccc-h-hhhhcCCccEEEccCCc-cccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 5777888888887743 3 47778888888888886 554433 7788888888888888874 43 578888888888
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF 223 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 223 (955)
|++|.+++..+ +..+++|++|++++|.....+ ..+..+++|++|++++|.++ .++. +..+++|+.|++
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-------~~~~~l~~L~~L~l~~~~~~-~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDL-------SPLSNMTGLNYLTVTESKVK-DVTP--IANLTDLYSLSL 184 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-------GGGTTCTTCCEEECCSSCCC-CCGG--GGGCTTCSEEEC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCcccc-------cchhhCCCCcEEEecCCCcC-Cchh--hccCCCCCEEEc
Confidence 88888875333 778888888888888544222 23556677777888888877 3333 555677888888
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASE 303 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 303 (955)
++|++.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++.++ +..+++|++|++++|.++.
T Consensus 185 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-- 257 (347)
T 4fmz_A 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-- 257 (347)
T ss_dssp TTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC--
T ss_pred cCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC--
Confidence 8888775433 7777888888888888875443 7777888888888888877666 7777888888888887764
Q ss_pred CChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCccccccCCCCCCC
Q 002189 304 VPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYTERGGAPA 382 (955)
Q Consensus 304 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~~~~~~~~ 382 (955)
+ ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..+..+ .+.+|+.|+|++|+++++++ +..+
T Consensus 258 ~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l 332 (347)
T 4fmz_A 258 I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASL 332 (347)
T ss_dssp C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGC
T ss_pred C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhh
Confidence 2 4577778888888888887753 356777888888888888877665543 36677788888888887766 3344
Q ss_pred cceeEecC
Q 002189 383 VNLTLIDN 390 (955)
Q Consensus 383 ~~L~~l~n 390 (955)
.+|+.++.
T Consensus 333 ~~L~~L~l 340 (347)
T 4fmz_A 333 SKMDSADF 340 (347)
T ss_dssp TTCSEESS
T ss_pred hccceeeh
Confidence 44444443
No 291
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.4e-29 Score=282.41 Aligned_cols=283 Identities=21% Similarity=0.237 Sum_probs=243.5
Q ss_pred cccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeec
Q 002189 89 ELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDL 168 (955)
Q Consensus 89 ~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 168 (955)
+|+.++++++. +. .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 32 ~l~~l~~~~~~-l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLG-LE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSC-CC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCC-cc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 57899999997 44 5676665 68999999999999877778999999999999999999888999999999999999
Q ss_pred CCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccc--cCCcccCCCCCCcEEE
Q 002189 169 TDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTG--ELPATLGLVKSLEVVR 246 (955)
Q Consensus 169 ~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~ 246 (955)
++|+++ .+|..+. .+|++|++++|+++ .++...+..+.+|+.|++++|++.. ..+..+..+++|++|+
T Consensus 108 s~n~l~-~l~~~~~--------~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--------KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp CSSCCS-BCCSSCC--------TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred CCCcCC-ccChhhc--------ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 999998 6776543 57899999999999 7888888889999999999999964 7788999999999999
Q ss_pred cccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcce
Q 002189 247 FDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 247 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
+++|.++ .+|..+. ++|+.|+|++|.+++..+ .+..+++|++|+|++|.+++ ..+..+..+++|+.|+|++|+++
T Consensus 178 l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 178 IADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp CCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE-ECTTTGGGSTTCCEEECCSSCCS
T ss_pred CCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce-eChhhccCCCCCCEEECCCCcCc
Confidence 9999999 5666654 899999999999999876 58899999999999999976 56668999999999999999999
Q ss_pred ecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-------hhhhhhhcccCCcccc--ccCCCCCCCcceeEecC
Q 002189 326 GQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-------YSENLLVNLQNNRISA--YTERGGAPAVNLTLIDN 390 (955)
Q Consensus 326 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-------~~~l~~L~L~~N~l~~--~~~~~~~~~~~L~~l~n 390 (955)
.+|..+..+++|++|+|++|+|++..+..+. ...+..|++++|++.. +.+..|..+.+|+.++.
T Consensus 254 -~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L 326 (330)
T 1xku_A 254 -KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 326 (330)
T ss_dssp -SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC
T ss_pred -cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEe
Confidence 8899999999999999999999998776653 3456689999999875 56666666665555543
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=7.3e-30 Score=286.57 Aligned_cols=282 Identities=20% Similarity=0.303 Sum_probs=245.3
Q ss_pred CCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEE
Q 002189 63 NSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLL 142 (955)
Q Consensus 63 ~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 142 (955)
..+++.|+|++|.+++..+ +..+++|++|+|++|+ +.. +| .|.++++|++|+|++|.+++ ++. +..+++|++|
T Consensus 65 ~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~-i~~-~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L 137 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNK-ITD-IS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSL 137 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC-CCC-CG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEE
T ss_pred cCCccEEEccCCccccchh--hhcCCcCCEEEccCCc-ccC-ch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeEE
Confidence 4689999999999996544 9999999999999997 665 33 69999999999999999995 444 8999999999
Q ss_pred EccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeee
Q 002189 143 SLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVL 222 (955)
Q Consensus 143 ~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~ 222 (955)
++++|.....++ .+..+++|++|++++|.+.+.. .+..+++|+.|++++|+++ .++. +....+|+.|+
T Consensus 138 ~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~--------~~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~ 205 (347)
T 4fmz_A 138 NLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVT--------PIANLTDLYSLSLNYNQIE-DISP--LASLTSLHYFT 205 (347)
T ss_dssp ECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCG--------GGGGCTTCSEEECTTSCCC-CCGG--GGGCTTCCEEE
T ss_pred ECCCCCCccccc-chhhCCCCcEEEecCCCcCCch--------hhccCCCCCEEEccCCccc-cccc--ccCCCccceee
Confidence 999997664444 4999999999999999998332 2677889999999999998 5555 66788999999
Q ss_pred ccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCC
Q 002189 223 FDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDAS 302 (955)
Q Consensus 223 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 302 (955)
+++|++.+..+ +..+++|++|++++|.+++..+ +..+++|+.|+|++|.+++. +.+..+++|++|++++|.++.
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~- 279 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD- 279 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-
Confidence 99999997655 8899999999999999995444 99999999999999999986 568889999999999999976
Q ss_pred CCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccc
Q 002189 303 EVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRIS 372 (955)
Q Consensus 303 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~ 372 (955)
+ ..+..+++|+.|++++|++++..+..+..+++|++|+|++|++++..| ...+.+|+.|++++|+|+
T Consensus 280 -~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 280 -I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQVIK 346 (347)
T ss_dssp -C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC---
T ss_pred -C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhccc
Confidence 3 468999999999999999999999999999999999999999999877 667888999999999986
No 293
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=1.1e-29 Score=296.94 Aligned_cols=296 Identities=25% Similarity=0.367 Sum_probs=250.9
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|++.++++.. ++ .+..+++|++|+|++|+ +.+..| +.++++|++|+|++|++++..+ +.++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~-l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQ-LTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCc-cCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 589999999999985 44 48899999999999997 776544 9999999999999999996554 99999999999
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF 223 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 223 (955)
|++|++++..+ +.++++|++|+|++|++++ + +.+..+.+|+.|+++ |.+. .++. +..+.+|+.|++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-------~~~~~l~~L~~L~l~-~~~~-~~~~--~~~l~~L~~L~l 184 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-I-------SALSGLTSLQQLSFG-NQVT-DLKP--LANLTTLERLDI 184 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-C-------GGGTTCTTCSEEEEE-ESCC-CCGG--GTTCTTCCEEEC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-C-------hhhccCCcccEeecC-Cccc-Cchh--hccCCCCCEEEC
Confidence 99999996543 9999999999999999983 2 346677888999996 5665 3332 677889999999
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASE 303 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 303 (955)
++|++.+. ..+..+++|++|++++|.+++..| +..+++|+.|++++|.+++. +.+..+++|++|++++|.+++
T Consensus 185 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~-- 257 (466)
T 1o6v_A 185 SSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISN-- 257 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC--
T ss_pred cCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCcccc--
Confidence 99999864 358999999999999999997665 78899999999999999975 467889999999999999976
Q ss_pred CChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccccCCCCCCCc
Q 002189 304 VPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTERGGAPAV 383 (955)
Q Consensus 304 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~~~ 383 (955)
.+. +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+ ...+.+|+.|+|++|+++++.+ +..+.
T Consensus 258 ~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~ 331 (466)
T 1o6v_A 258 LAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLT 331 (466)
T ss_dssp CGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCT
T ss_pred chh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCc
Confidence 333 8999999999999999996544 8899999999999999998766 5567889999999999999877 44556
Q ss_pred ceeEecCcch
Q 002189 384 NLTLIDNPIC 393 (955)
Q Consensus 384 ~L~~l~n~~c 393 (955)
+|+.++...|
T Consensus 332 ~L~~L~l~~n 341 (466)
T 1o6v_A 332 KLQRLFFYNN 341 (466)
T ss_dssp TCCEEECCSS
T ss_pred cCCEeECCCC
Confidence 6666655443
No 294
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=4.7e-29 Score=290.06 Aligned_cols=276 Identities=19% Similarity=0.199 Sum_probs=197.4
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|++++. | .+..+++|++|+|++|+ +.+. | ++.+++|++|+|++|++++. + ++++++|++|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~-l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNN-ITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSC-CSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCc-CCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 6888999999999875 4 68889999999999997 7664 3 88889999999999998864 4 88889999999
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF 223 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 223 (955)
|++|++++ +| ++++++|++|++++|++++ ++ +..+++|++|++++|+..+.++ +..+++|+.|++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--------l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~l 177 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--------VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDC 177 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--------CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEEC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--------cccCCcCCEEECCCCCcccccc---cccCCcCCEEEC
Confidence 99999986 44 8888999999999999885 32 3445667777888886555553 445677888888
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASE 303 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 303 (955)
++|++++ +| +..+++|+.|++++|.+++. .+..+++|+.|+|++|++++++ +..+++|++|++++|++++.
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~- 248 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTEL- 248 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC-
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCc-
Confidence 8888876 34 77777888888888888754 3777778888888888887753 67777888888888887762
Q ss_pred CChhhcCCC-------CCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCC---------Ccchhhhhhhccc
Q 002189 304 VPSWFSSMQ-------SLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDL---------GTSYSENLLVNLQ 367 (955)
Q Consensus 304 ~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~---------~~~~~~l~~L~L~ 367 (955)
.+..+.++. +|+.|++++|.+.+.+| +..+++|+.|+|++|++.+.+|. ...+.+|+.|+|+
T Consensus 249 ~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~ 326 (457)
T 3bz5_A 249 DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLN 326 (457)
T ss_dssp CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECT
T ss_pred CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECC
Confidence 233333333 34455555555555554 35567777777777766655442 1123455566777
Q ss_pred CCccccc
Q 002189 368 NNRISAY 374 (955)
Q Consensus 368 ~N~l~~~ 374 (955)
+|+|+++
T Consensus 327 ~N~l~~l 333 (457)
T 3bz5_A 327 NTELTEL 333 (457)
T ss_dssp TCCCSCC
T ss_pred CCccccc
Confidence 7777765
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.2e-30 Score=288.60 Aligned_cols=283 Identities=20% Similarity=0.223 Sum_probs=235.1
Q ss_pred CCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCC
Q 002189 52 CGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPD 131 (955)
Q Consensus 52 C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 131 (955)
|.|.|.|+ | ++++++++ .+|..+. ++|++|+|++|+ +.+..+..|.++++|++|+|++|++++..|.
T Consensus 28 ~~C~~~~~-c--------~~~~~~l~-~iP~~~~--~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 94 (353)
T 2z80_A 28 LSCDRNGI-C--------KGSSGSLN-SIPSGLT--EAVKSLDLSNNR-ITYISNSDLQRCVNLQALVLTSNGINTIEED 94 (353)
T ss_dssp CEECTTSE-E--------ECCSTTCS-SCCTTCC--TTCCEEECTTSC-CCEECTTTTTTCTTCCEEECTTSCCCEECTT
T ss_pred CCCCCCeE-e--------eCCCCCcc-ccccccc--ccCcEEECCCCc-CcccCHHHhccCCCCCEEECCCCccCccCHh
Confidence 33478887 6 45677888 5565554 589999999997 8877777899999999999999999988888
Q ss_pred ccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccc
Q 002189 132 SIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKL 211 (955)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~ 211 (955)
.|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++ .+|. ...+..+++|++|++++|+..+.++...
T Consensus 95 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~----~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 95 SFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGE----TSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp TTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCS----SCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred hcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCc----hhhhccCCCCcEEECCCCccccccCHHH
Confidence 8999999999999999999655555899999999999999998 4543 0124557788999999995333787778
Q ss_pred cCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC----CCCCC
Q 002189 212 FRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN----LTGLS 287 (955)
Q Consensus 212 ~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~----~~~l~ 287 (955)
+..+.+|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|+|++|.+++.++. .....
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~ 249 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNS 249 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCC
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccc
Confidence 88889999999999999999999999999999999999999844444456689999999999999987653 33477
Q ss_pred CCCEEECcCCCCCCC---CCChhhcCCCCCCEEECcCCcceecCCcC-CCCCCCCcEEEeecCcceeeeC
Q 002189 288 VLSYLDMSNNSFDAS---EVPSWFSSMQSLTTLMMENTNLKGQIPAD-LFSIPHLQTVVMKTNELNGTLD 353 (955)
Q Consensus 288 ~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~ 353 (955)
.++.++|++|.+++. .+|.++..+++|+.|+|++|+++ .+|.. |..+++|++|+|++|++++..|
T Consensus 250 ~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 250 LIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 899999999998652 35778899999999999999999 56666 5899999999999999998765
No 296
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=4.3e-29 Score=290.40 Aligned_cols=308 Identities=18% Similarity=0.178 Sum_probs=247.3
Q ss_pred CCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEE
Q 002189 63 NSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLL 142 (955)
Q Consensus 63 ~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 142 (955)
..+++.|+|++|.+++. + ++.+++|++|+|++|+ +.+. | |+++++|++|+|++|++++ +| ++.+++|++|
T Consensus 63 l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~-l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L 132 (457)
T 3bz5_A 63 LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNK-LTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYL 132 (457)
T ss_dssp CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSC-CSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEE
T ss_pred cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCC-Ccee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEE
Confidence 36899999999999985 3 9999999999999997 7764 3 9999999999999999996 55 8999999999
Q ss_pred EccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeee
Q 002189 143 SLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVL 222 (955)
Q Consensus 143 ~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~ 222 (955)
++++|+|++ ++ ++++++|++|++++|+..+.++ +..+++|+.|++++|+++ .+| +...++|+.|+
T Consensus 133 ~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~--------~~~l~~L~~L~ls~n~l~-~l~---l~~l~~L~~L~ 197 (457)
T 3bz5_A 133 NCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD--------VTPQTQLTTLDCSFNKIT-ELD---VSQNKLLNRLN 197 (457)
T ss_dssp ECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC--------CTTCTTCCEEECCSSCCC-CCC---CTTCTTCCEEE
T ss_pred ECCCCccce-ec--cccCCcCCEEECCCCCcccccc--------cccCCcCCEEECCCCccc-eec---cccCCCCCEEE
Confidence 999999997 43 8899999999999997665552 455778899999999999 476 56678999999
Q ss_pred ccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCC----------EE
Q 002189 223 FDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLS----------YL 292 (955)
Q Consensus 223 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~----------~L 292 (955)
+++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++.++ ..+++|+ .|
T Consensus 198 l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~--~~l~~L~~L~l~~n~L~~L 269 (457)
T 3bz5_A 198 CDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV--STLSKLTTLHCIQTDLLEI 269 (457)
T ss_dssp CCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC--TTCTTCCEEECTTCCCSCC
T ss_pred CcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH--HHCCCCCEEeccCCCCCEE
Confidence 999999976 48999999999999999996 66 8899999999999999999864 3444454 55
Q ss_pred ECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCc--------CCCCCCCCcEEEeecCcceeeeCCCcchhhhhhh
Q 002189 293 DMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPA--------DLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLV 364 (955)
Q Consensus 293 ~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L 364 (955)
++++|.+.+ .+| ++.+++|+.|+|++|...+.+|. .+..+++|+.|+|++|+|++. + ...+.+|+.|
T Consensus 270 ~l~~n~~~~-~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~-l~~l~~L~~L 344 (457)
T 3bz5_A 270 DLTHNTQLI-YFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D-VSHNTKLKSL 344 (457)
T ss_dssp CCTTCTTCC-EEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C-CTTCTTCSEE
T ss_pred ECCCCccCC-ccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c-cccCCcCcEE
Confidence 555555433 223 46789999999999998776664 356678999999999999995 3 6668889999
Q ss_pred cccCCccccccCCCCCCCcceeEecCc-----chhcccCc-cccccccCCCCCCC
Q 002189 365 NLQNNRISAYTERGGAPAVNLTLIDNP-----ICQELGTA-KGYCQLSQPISPYS 413 (955)
Q Consensus 365 ~L~~N~l~~~~~~~~~~~~~L~~l~n~-----~c~~~~~~-~~~c~~~~~~~~~~ 413 (955)
++++|+|++++ .+..|....|. -+..+... .+...+.+.||+..
T Consensus 345 ~l~~N~l~~l~-----~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 345 SCVNAHIQDFS-----SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp ECCSSCCCBCT-----TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCTTC
T ss_pred ECCCCCCCCcc-----ccccccccCCcEEecceeeecCccccccCcEEEEcChhH
Confidence 99999999853 34444433333 22334443 55667777776543
No 297
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=2e-29 Score=306.28 Aligned_cols=323 Identities=21% Similarity=0.217 Sum_probs=223.0
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|+|+++.+.+|.+|++|++|+|++|+ +++..+..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~-l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP-IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC-CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc-CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 589999999999998888899999999999999997 8888788899999999999999999987778899999999999
Q ss_pred ccCCCCcCc-CCCCCCCCCCcCeeecCCceeeeccCCCCCCCCch-----------------------------------
Q 002189 144 LNSNGFSGR-VPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGL----------------------------------- 187 (955)
Q Consensus 144 Ls~N~l~~~-~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l----------------------------------- 187 (955)
|++|+|++. +|..++.+++|++|+|++|+|++..|..+..+..+
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 999999863 57788999999999999999986554332110000
Q ss_pred --------------------------------------------------------------------------------
Q 002189 188 -------------------------------------------------------------------------------- 187 (955)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (955)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ----------hhhhccccccccCCcccccCCcccc-------------------CCccceeeeeccCCCccc--cCCccc
Q 002189 188 ----------DMLVRAKHFHFGKNQLSGSIPEKLF-------------------RPDMVLIHVLFDSNNLTG--ELPATL 236 (955)
Q Consensus 188 ----------~~L~~L~~L~L~~N~l~g~ip~~~~-------------------~~~~~L~~L~L~~N~l~~--~~p~~l 236 (955)
.....|+.|++.+|++. .++...+ ..+++|+.|+++.|.+.. ..+..+
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 393 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSD 393 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEES-SCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHH
T ss_pred ccccccccccccchhhhhhhccccccc-CcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccch
Confidence 00012333444444443 2221111 124567888888888753 233344
Q ss_pred CC-----------------------CCCCcEEEcccCCCCCCc-cccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCE
Q 002189 237 GL-----------------------VKSLEVVRFDRNSLSGPV-PSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSY 291 (955)
Q Consensus 237 ~~-----------------------l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 291 (955)
.. +++|+.++++.|.+.... +..+..+++|+.+++++|.+++..+ .+..+++|+.
T Consensus 394 ~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~ 473 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 473 (635)
T ss_dssp HSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred hhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 44 444555555544443322 2345566666667777777666655 3556677777
Q ss_pred EECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCc
Q 002189 292 LDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNR 370 (955)
Q Consensus 292 L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~ 370 (955)
|+|++|.+.....|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.++..+. +.+|+.|+|++|+
T Consensus 474 L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 553 (635)
T 4g8a_A 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553 (635)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSC
T ss_pred hhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCc
Confidence 777777654444566677777777777777777777777777777777777777777776665443 5566677777777
Q ss_pred cccccCCCCCCC-cceeEe
Q 002189 371 ISAYTERGGAPA-VNLTLI 388 (955)
Q Consensus 371 l~~~~~~~~~~~-~~L~~l 388 (955)
|+++++..+..+ .+|+.+
T Consensus 554 l~~~~~~~l~~l~~~L~~L 572 (635)
T 4g8a_A 554 IMTSKKQELQHFPSSLAFL 572 (635)
T ss_dssp CCBCCSSCTTCCCTTCCEE
T ss_pred CCCCCHHHHHhhhCcCCEE
Confidence 777777666544 344433
No 298
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=3.8e-28 Score=264.79 Aligned_cols=276 Identities=18% Similarity=0.187 Sum_probs=185.6
Q ss_pred cEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCC
Q 002189 58 GIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQ 137 (955)
Q Consensus 58 gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 137 (955)
+..|.....+.++.++++++. +|..+ .++|++|+|++|+ +.+..+..|.++++|++|+|++|.+++..|..|..++
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~-i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNR-ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp TCEEECSSSCEEECCSSCCSS-CCTTC--CTTCSEEECTTSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CceECCCCCeEEEcCcCCccc-CCcCC--CCCceEEEeeCCc-CCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 445765555678888888884 45433 4689999999996 7877777888888888888888888877788888888
Q ss_pred CCcEEEccCCC-CcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCcc
Q 002189 138 ELVLLSLNSNG-FSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDM 216 (955)
Q Consensus 138 ~L~~L~Ls~N~-l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~ 216 (955)
+|++|+|++|. ++...|..|..+++|++|+|++|++++..
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------------------------- 121 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELG--------------------------------------- 121 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCC---------------------------------------
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEEC---------------------------------------
Confidence 88888888887 77666778888888888888888776322
Q ss_pred ceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEEECc
Q 002189 217 VLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYLDMS 295 (955)
Q Consensus 217 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls 295 (955)
|..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++.++. +..+++|++|+|+
T Consensus 122 ----------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 185 (285)
T 1ozn_A 122 ----------------PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (285)
T ss_dssp ----------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ----------------HhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECC
Confidence 22334445555555555555544444455566666666666666655553 5556666666666
Q ss_pred CCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCcccccc
Q 002189 296 NNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYT 375 (955)
Q Consensus 296 ~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~ 375 (955)
+|.+++ ..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.+..+.......+..+..+.|.+.+..
T Consensus 186 ~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~ 264 (285)
T 1ozn_A 186 QNRVAH-VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSL 264 (285)
T ss_dssp SSCCCE-ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEE
T ss_pred CCcccc-cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCC
Confidence 666654 3456666667777777777777655555567777777777777777766555444445666777777777666
Q ss_pred CCCCCC--CcceeEecCcch
Q 002189 376 ERGGAP--AVNLTLIDNPIC 393 (955)
Q Consensus 376 ~~~~~~--~~~L~~l~n~~c 393 (955)
|..+.+ +..++..+..+|
T Consensus 265 p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 265 PQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp SGGGTTCBGGGSCGGGSCCC
T ss_pred chHhCCcChhhcCHHHhccC
Confidence 654433 344444444444
No 299
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=2.5e-28 Score=283.63 Aligned_cols=274 Identities=20% Similarity=0.243 Sum_probs=140.7
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccc-----------------------------
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKK----------------------------- 114 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~----------------------------- 114 (955)
.++++|++++|++ |.+|..+++|++|++|+|++|+ +.|.+|..++++++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~-~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSE-WERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHH-HHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCc-ccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 3455555555555 4555555555555555555554 55555555555444
Q ss_pred ----cccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh
Q 002189 115 ----LSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML 190 (955)
Q Consensus 115 ----L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L 190 (955)
|++|+|++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|+|++|++++ +| + +..+
T Consensus 89 ~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~------~~~l 152 (454)
T 1jl5_A 89 LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E------LQNS 152 (454)
T ss_dssp CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C------CTTC
T ss_pred CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c------cCCC
Confidence 4444444444443 3322 1344444444444442 2211 1467777777777763 55 2 3445
Q ss_pred hccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEE
Q 002189 191 VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLY 270 (955)
Q Consensus 191 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 270 (955)
++|++|++++|+++ .+|... .+|++|++++|++++ +| .++.+++|+.|++++|.+++ +|... ++|+.|+
T Consensus 153 ~~L~~L~l~~N~l~-~lp~~~----~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~ 221 (454)
T 1jl5_A 153 SFLKIIDVDNNSLK-KLPDLP----PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIV 221 (454)
T ss_dssp TTCCEEECCSSCCS-CCCCCC----TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEE
T ss_pred CCCCEEECCCCcCc-ccCCCc----ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEE
Confidence 66677778888777 466533 367777777777775 45 57777777777777777774 44322 4666777
Q ss_pred ccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCccee
Q 002189 271 LSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 271 Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
+++|.++.++ .+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|+.|+|++|++++
T Consensus 222 l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~--l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 222 AGNNILEELP-ELQNLPFLTTIYADNNLLKT--LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCSSCCSSCC-CCTTCTTCCEEECCSSCCSS--CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred CcCCcCCccc-ccCCCCCCCEEECCCCcCCc--cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 7777666433 46666667777777766654 3322 3555666666665553 3332 2445555555555544
Q ss_pred ee--CCCc--------------ch-hhhhhhcccCCccccccC
Q 002189 351 TL--DLGT--------------SY-SENLLVNLQNNRISAYTE 376 (955)
Q Consensus 351 ~~--~~~~--------------~~-~~l~~L~L~~N~l~~~~~ 376 (955)
.. |... .+ ..++.|++++|++++++.
T Consensus 292 l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~lp~ 334 (454)
T 1jl5_A 292 LSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPA 334 (454)
T ss_dssp ESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCCC
T ss_pred ccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCccccccc
Confidence 21 1000 11 356677777777777544
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.9e-27 Score=275.91 Aligned_cols=248 Identities=21% Similarity=0.220 Sum_probs=191.2
Q ss_pred EEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCC
Q 002189 68 SITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSN 147 (955)
Q Consensus 68 ~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 147 (955)
.++..+.+++ .+|..+. ++++.|+|++|+ +.+..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~-i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQ-IQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCC-CCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCc-CCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4455556666 5565554 689999999997 88888899999999999999999999777788999999999999999
Q ss_pred CCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCC
Q 002189 148 GFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNN 227 (955)
Q Consensus 148 ~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~ 227 (955)
+|+...+..|.++++|++|+|++|+|++..+ ..|..+++|+.|+|++|+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-------------------------------~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPS-------------------------------YAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECT-------------------------------TTTTTCTTCCEEECCCCT
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCH-------------------------------HHhhhCcccCEeCCCCCC
Confidence 9997667789999999999999999883322 223333344444554422
Q ss_pred -ccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCC
Q 002189 228 -LTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVP 305 (955)
Q Consensus 228 -l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p 305 (955)
+....+..|..+++|++|+|++|.|+ .+| .+..+++|+.|+|++|+|++..+ .|.++++|+.|+|++|+|++ ..+
T Consensus 172 ~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~ 248 (440)
T 3zyj_A 172 RLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV-IER 248 (440)
T ss_dssp TCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE-ECT
T ss_pred CcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE-ECh
Confidence 22223345677777777777777777 445 37777888888888888888766 57778888888888888875 567
Q ss_pred hhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeC
Q 002189 306 SWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLD 353 (955)
Q Consensus 306 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 353 (955)
..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 778888889999999998887777778889999999999999987654
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.9e-27 Score=276.91 Aligned_cols=249 Identities=21% Similarity=0.219 Sum_probs=180.7
Q ss_pred EEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCC
Q 002189 69 ITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNG 148 (955)
Q Consensus 69 L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 148 (955)
++.++.+++ .+|..+. ++|++|+|++|+ +.+..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 59 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~-i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP--SNTRYLNLMENN-IQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcC-ccCCCCC--CCccEEECcCCc-CceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 344445555 4554443 689999999997 888889999999999999999999998888889999999999999999
Q ss_pred CcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCc
Q 002189 149 FSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNL 228 (955)
Q Consensus 149 l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l 228 (955)
|++..+..|.++++|++|+|++|+|++..+..+ ..+++|+.|++++|+..+.++.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~------~~l~~L~~L~l~~~~~l~~i~~------------------- 189 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAF------NRVPSLMRLDLGELKKLEYISE------------------- 189 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTT------TTCTTCCEEECCCCTTCCEECT-------------------
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHH------hcCCcccEEeCCCCCCccccCh-------------------
Confidence 997777779999999999999999883322222 2233444445544322223333
Q ss_pred cccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChh
Q 002189 229 TGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSW 307 (955)
Q Consensus 229 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~ 307 (955)
..|..+++|++|+|++|++++ +| .+..+++|+.|+|++|.|++.++ .+.++++|+.|+|++|++++ ..+..
T Consensus 190 -----~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~ 261 (452)
T 3zyi_A 190 -----GAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-IERNA 261 (452)
T ss_dssp -----TTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE-ECTTT
T ss_pred -----hhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce-ECHHH
Confidence 345666666666666666663 33 36666777777777777776655 46667777777777777765 45667
Q ss_pred hcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCC
Q 002189 308 FSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDL 354 (955)
Q Consensus 308 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 354 (955)
|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+....
T Consensus 262 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 262 FDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred hcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 77788888888888888877777788889999999999998876543
No 302
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.5e-29 Score=276.77 Aligned_cols=248 Identities=20% Similarity=0.204 Sum_probs=162.7
Q ss_pred cCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccC-CCCCCccc-------cCCCCcEEEccCCCCcCcCCC
Q 002189 84 ITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFS-GPIPDSIG-------SLQELVLLSLNSNGFSGRVPP 155 (955)
Q Consensus 84 l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 155 (955)
+..+++|+.|++++|. + .+|..+... |+.|+|++|.++ +.+|..+. ++++|++|+|++|+|++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~-l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDT-E--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCT-T--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeecccc-c--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 4556778888888886 5 667766654 888888888884 45666555 688888888888888888888
Q ss_pred CC--CCCCCcCeeecCCceeeeccCCCCCCCCchhhh-----hccccccccCCcccccCCccccCCccceeeeeccCCCc
Q 002189 156 SI--GNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML-----VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNL 228 (955)
Q Consensus 156 ~~--~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L-----~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l 228 (955)
.+ ..+++|++|+|++|++++. |.. +..+ ++|++|+|++|+++ .++...+..+++|++|+|++|++
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~------~~~l~~~~~~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l 185 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAW------LAELQQWLKPGLKVLSIAQAHSL-NFSCEQVRVFPALSTLDLSDNPE 185 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSH------HHHHHTTCCTTCCEEEEESCSCC-CCCTTTCCCCSSCCEEECCSCTT
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHH------HHHHHHhhcCCCcEEEeeCCCCc-cchHHHhccCCCCCEEECCCCCc
Confidence 76 7888888888888888854 532 3334 56666666666666 44444455556666666666666
Q ss_pred ccc--CCccc--CCCCCCcEEEcccCCCCC--Ccc-ccccCCCCCCEEEccCCcCcccCC--CCCCCCCCCEEECcCCCC
Q 002189 229 TGE--LPATL--GLVKSLEVVRFDRNSLSG--PVP-SNLNNLTSVNDLYLSNNKLTGAMP--NLTGLSVLSYLDMSNNSF 299 (955)
Q Consensus 229 ~~~--~p~~l--~~l~~L~~L~Ls~N~l~~--~~p-~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l 299 (955)
.+. ++..+ ..+++|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.++ .+..+++|++|+|++|+|
T Consensus 186 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 265 (312)
T 1wwl_A 186 LGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL 265 (312)
T ss_dssp CHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCC
T ss_pred CcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCcc
Confidence 554 23333 666677777777776662 112 333456667777777777666553 345566666666666666
Q ss_pred CCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCccee
Q 002189 300 DASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 300 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|+|++
T Consensus 266 ~--~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 266 K--QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp S--SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred C--hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 3455444 5666666666666644 44 6666666666666666653
No 303
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5.9e-28 Score=289.24 Aligned_cols=284 Identities=26% Similarity=0.333 Sum_probs=233.7
Q ss_pred CCCCCCCCCCCCccE--------EeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccc
Q 002189 45 NWKNNDPCGDNWEGI--------GCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLS 116 (955)
Q Consensus 45 ~w~~~~~C~~~w~gv--------~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~ 116 (955)
.|....+|+ .|.|. .|....++.|++++|+|+ .+|..+. ++|++|+|++|+ ++ .+|. .+++|+
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~-l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNN-LT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCC-CS-CCCC---CCTTCC
T ss_pred HHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCC-CC-CCCC---cCCCCC
Confidence 465555553 57653 344567999999999999 7777665 899999999997 66 4565 578999
Q ss_pred cccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccc
Q 002189 117 NLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHF 196 (955)
Q Consensus 117 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L 196 (955)
+|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|.. +++|++|
T Consensus 85 ~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---------l~~L~~L 146 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---------PPGLQEL 146 (622)
T ss_dssp EEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---------CTTCCEE
T ss_pred EEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---------CCCCCEE
Confidence 9999999999 5776 77999999999999995 555 6789999999999998 46643 3678999
Q ss_pred cccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcC
Q 002189 197 HFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKL 276 (955)
Q Consensus 197 ~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 276 (955)
+|++|+++ .+|. ...+|+.|++++|+|++ +| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|.|
T Consensus 147 ~Ls~N~l~-~l~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l 213 (622)
T 3g06_A 147 SVSDNQLA-SLPA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRL 213 (622)
T ss_dssp ECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred ECcCCcCC-CcCC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcc
Confidence 99999999 6665 34679999999999996 55 567899999999999994 5543 48999999999999
Q ss_pred cccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc
Q 002189 277 TGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT 356 (955)
Q Consensus 277 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 356 (955)
+.++.. +++|++|+|++|.|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+..++.+.
T Consensus 214 ~~l~~~---~~~L~~L~Ls~N~L~~--lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~ 281 (622)
T 3g06_A 214 TSLPAL---PSGLKELIVSGNRLTS--LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLI 281 (622)
T ss_dssp SSCCCC---CTTCCEEECCSSCCSC--CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGG
T ss_pred cccCCC---CCCCCEEEccCCccCc--CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHh
Confidence 977653 4889999999999976 55 56789999999999999 5666 67899999999999996655556
Q ss_pred chhhhhhhcccCCccccccCCCCC
Q 002189 357 SYSENLLVNLQNNRISAYTERGGA 380 (955)
Q Consensus 357 ~~~~l~~L~L~~N~l~~~~~~~~~ 380 (955)
.+.+|..|+|++|+|++..+..+.
T Consensus 282 ~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 282 HLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp GSCTTCEEECCSCCCCHHHHHHHH
T ss_pred hccccCEEEecCCCCCCcCHHHHH
Confidence 688889999999999987776443
No 304
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.2e-27 Score=266.25 Aligned_cols=239 Identities=18% Similarity=0.269 Sum_probs=206.6
Q ss_pred CCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCe
Q 002189 86 GLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYW 165 (955)
Q Consensus 86 ~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~ 165 (955)
..+.++.|+|++|+ +. .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|+|+ .+|..+.++++|++
T Consensus 79 ~~~~l~~L~L~~n~-l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~ 154 (328)
T 4fcg_A 79 TQPGRVALELRSVP-LP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRE 154 (328)
T ss_dssp TSTTCCEEEEESSC-CS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCE
T ss_pred cccceeEEEccCCC-ch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCE
Confidence 35789999999997 55 77888999999999999999999 88999999999999999999999 78888999999999
Q ss_pred eecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEE
Q 002189 166 LDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVV 245 (955)
Q Consensus 166 L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 245 (955)
|+|++|++.+.+|..++. ..++..|..+++|++|
T Consensus 155 L~L~~n~~~~~~p~~~~~----------------------------------------------~~~~~~~~~l~~L~~L 188 (328)
T 4fcg_A 155 LSIRACPELTELPEPLAS----------------------------------------------TDASGEHQGLVNLQSL 188 (328)
T ss_dssp EEEEEETTCCCCCSCSEE----------------------------------------------EC-CCCEEESTTCCEE
T ss_pred EECCCCCCccccChhHhh----------------------------------------------ccchhhhccCCCCCEE
Confidence 999988877666644321 0223457889999999
Q ss_pred EcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcce
Q 002189 246 RFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 246 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
+|++|.|+ .+|..+.++++|+.|+|++|.++++++.+..+++|++|+|++|++.+ .+|..+.++++|+.|+|++|++.
T Consensus 189 ~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~-~~p~~~~~l~~L~~L~L~~n~~~ 266 (328)
T 4fcg_A 189 RLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALR-NYPPIFGGRAPLKRLILKDCSNL 266 (328)
T ss_dssp EEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCC-BCCCCTTCCCCCCEEECTTCTTC
T ss_pred ECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchh-hhHHHhcCCCCCCEEECCCCCch
Confidence 99999999 88999999999999999999999988889999999999999999987 68889999999999999999999
Q ss_pred ecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCccccccC
Q 002189 326 GQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNRISAYTE 376 (955)
Q Consensus 326 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~~~~~ 376 (955)
+.+|..+..+++|+.|+|++|++.+.+|..+. +.++..+++..|.+..+..
T Consensus 267 ~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l~~ 318 (328)
T 4fcg_A 267 LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQ 318 (328)
T ss_dssp CBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC---
T ss_pred hhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHHhh
Confidence 99999999999999999999999998887654 6677788888777665443
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=9.6e-27 Score=271.01 Aligned_cols=246 Identities=21% Similarity=0.205 Sum_probs=203.9
Q ss_pred cEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCC
Q 002189 91 HTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTD 170 (955)
Q Consensus 91 ~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~ 170 (955)
..++.+++. ++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 57 ~~v~c~~~~-l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 57 SKVVCTRRG-LS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp CEEECCSSC-CS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred cEEEECCCC-cC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456777765 43 5666554 5788888888888877788888888888888888888877778888888888888888
Q ss_pred ceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEccc-
Q 002189 171 NKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDR- 249 (955)
Q Consensus 171 N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~- 249 (955)
|+|+ .+|...|..+++|++|+|++|++.+..+..|..+++|+.|+|++
T Consensus 133 n~l~-------------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 181 (452)
T 3zyi_A 133 NWLT-------------------------------VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181 (452)
T ss_dssp SCCS-------------------------------BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC
T ss_pred CcCC-------------------------------ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC
Confidence 8887 34444455556677777777777766667888999999999998
Q ss_pred CCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCC
Q 002189 250 NSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIP 329 (955)
Q Consensus 250 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 329 (955)
|.+....+..|.++++|+.|+|++|+|++. +.+..+++|++|+|++|.|++ ..|..|.++++|+.|+|++|++++..+
T Consensus 182 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~ 259 (452)
T 3zyi_A 182 KKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPE-IRPGSFHGLSSLKKLWVMNSQVSLIER 259 (452)
T ss_dssp TTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSE-ECGGGGTTCTTCCEEECTTSCCCEECT
T ss_pred CCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcc-cCcccccCccCCCEEEeCCCcCceECH
Confidence 455534445799999999999999999976 578899999999999999986 678899999999999999999999999
Q ss_pred cCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCcccc
Q 002189 330 ADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNRISA 373 (955)
Q Consensus 330 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~~ 373 (955)
..|..+++|+.|+|++|+|++.++..+. +.+|+.|+|++|++.+
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 9999999999999999999988877654 7778899999998875
No 306
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=3.1e-28 Score=269.77 Aligned_cols=267 Identities=19% Similarity=0.194 Sum_probs=201.2
Q ss_pred ccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecC
Q 002189 90 LHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLT 169 (955)
Q Consensus 90 L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~ 169 (955)
++.++++.+. +...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 12 l~i~~ls~~~-l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSS-LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTT-HHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccc-hhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 4445555554 444444444556667777777777776555667777777777777777765444 6777777777777
Q ss_pred CceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEccc
Q 002189 170 DNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDR 249 (955)
Q Consensus 170 ~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 249 (955)
+|++++.. ..++|++|++++|++++ ++... ..+|+.|++++|++++..+..+..+++|++|+|++
T Consensus 89 ~n~l~~l~-----------~~~~L~~L~l~~n~l~~-~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (317)
T 3o53_A 89 NNYVQELL-----------VGPSIETLHAANNNISR-VSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (317)
T ss_dssp SSEEEEEE-----------ECTTCCEEECCSSCCSE-EEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTT
T ss_pred CCcccccc-----------CCCCcCEEECCCCccCC-cCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCC
Confidence 77776322 12566777777777773 33332 35688999999999988888899999999999999
Q ss_pred CCCCCCccccc-cCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecC
Q 002189 250 NSLSGPVPSNL-NNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQI 328 (955)
Q Consensus 250 N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 328 (955)
|.+++..+..+ ..+++|+.|+|++|.|++.+. ...+++|++|+|++|++++ +|..+..+++|+.|+|++|+|+ .+
T Consensus 154 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~--l~~~~~~l~~L~~L~L~~N~l~-~l 229 (317)
T 3o53_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-QVVFAKLKTLDLSSNKLAF--MGPEFQSAAGVTWISLRNNKLV-LI 229 (317)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-CCCCTTCCEEECCSSCCCE--ECGGGGGGTTCSEEECTTSCCC-EE
T ss_pred CCCCcccHHHHhhccCcCCEEECCCCcCccccc-ccccccCCEEECCCCcCCc--chhhhcccCcccEEECcCCccc-ch
Confidence 99997777776 478999999999999998854 3458999999999999975 5666999999999999999999 57
Q ss_pred CcCCCCCCCCcEEEeecCcce-eeeCCC-cchhhhhhhccc-CCccccccCCC
Q 002189 329 PADLFSIPHLQTVVMKTNELN-GTLDLG-TSYSENLLVNLQ-NNRISAYTERG 378 (955)
Q Consensus 329 p~~~~~l~~L~~L~Ls~N~l~-~~~~~~-~~~~~l~~L~L~-~N~l~~~~~~~ 378 (955)
|..+..+++|+.|+|++|+++ +.++.+ ..+..++.|+++ .+.+++..+..
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred hhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 888999999999999999999 455544 447788899999 44566655543
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.9e-29 Score=275.56 Aligned_cols=266 Identities=17% Similarity=0.176 Sum_probs=221.2
Q ss_pred CCCCCCCCCCCCCCcc--EEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCC-ccCCCCCcc-------cc
Q 002189 43 PPNWKNNDPCGDNWEG--IGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDL-RGPLPTTIG-------NL 112 (955)
Q Consensus 43 ~~~w~~~~~C~~~w~g--v~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l-~~~~p~~~~-------~l 112 (955)
...|.....|.+ +.. +.|...+++.|++++|.+ .+|..+... |+.|+|++|+ + ...+|..+. ++
T Consensus 21 ~~~~~~~~~c~~-~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~-l~~~~~~~~~~~~~~~~~~l 94 (312)
T 1wwl_A 21 KPDWSSAFNCLG-AADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLT-VRAARIPSRILFGALRVLGI 94 (312)
T ss_dssp SCCGGGGGGSSS-CSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEE-EEEEECBHHHHHHHHHHHTT
T ss_pred ccchHHHhhhhc-cccEEEEccCCCceeEeeccccc--ccHHHHHHH--Hhhccccccc-ccCCCcCHHHHHHHHHhcCc
Confidence 356765555542 444 567777899999999999 677766554 9999999997 6 556777666 79
Q ss_pred cccccccccccccCCCCCCcc--ccCCCCcEEEccCCCCcCcCCCCCCCC-----CCcCeeecCCceeeeccCCCCCCCC
Q 002189 113 KKLSNLMLVGCSFSGPIPDSI--GSLQELVLLSLNSNGFSGRVPPSIGNL-----SNLYWLDLTDNKLEGEIPVSDGNSP 185 (955)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~L-----~~L~~L~L~~N~l~g~ip~~~~~~~ 185 (955)
++|++|+|++|++++.+|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..|..++.
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~-- 171 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV-- 171 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC--
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc--
Confidence 999999999999999999886 8999999999999999976 8888887 99999999999999766666554
Q ss_pred chhhhhccccccccCCcccccC--Ccc-ccCCccceeeeeccCCCccc--cCC-cccCCCCCCcEEEcccCCCCCCcc-c
Q 002189 186 GLDMLVRAKHFHFGKNQLSGSI--PEK-LFRPDMVLIHVLFDSNNLTG--ELP-ATLGLVKSLEVVRFDRNSLSGPVP-S 258 (955)
Q Consensus 186 ~l~~L~~L~~L~L~~N~l~g~i--p~~-~~~~~~~L~~L~L~~N~l~~--~~p-~~l~~l~~L~~L~Ls~N~l~~~~p-~ 258 (955)
+++|++|+|++|++.|.+ |.. .+..+++|++|+|++|++++ .++ ..+..+++|++|+|++|+|++..| .
T Consensus 172 ----l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 247 (312)
T 1wwl_A 172 ----FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAP 247 (312)
T ss_dssp ----CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCS
T ss_pred ----CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchh
Confidence 567789999999988663 333 34778899999999999993 223 455788999999999999998775 5
Q ss_pred cccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCccee
Q 002189 259 NLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKG 326 (955)
Q Consensus 259 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 326 (955)
.+..+++|+.|+|++|.|+.++..+. ++|++|+|++|+|++ .|. +..+++|+.|+|++|++++
T Consensus 248 ~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~--~p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 248 SCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLDR--NPS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCCS--CCC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCCC--Chh-HhhCCCCCEEeccCCCCCC
Confidence 67778999999999999997766666 899999999999987 366 8999999999999999985
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=268.18 Aligned_cols=247 Identities=21% Similarity=0.204 Sum_probs=208.0
Q ss_pred ccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecC
Q 002189 90 LHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLT 169 (955)
Q Consensus 90 L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~ 169 (955)
...++.++++ + ..+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 45 ~~~v~c~~~~-l-~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 45 FSKVICVRKN-L-REVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp SCEEECCSCC-C-SSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCEEEeCCCC-c-CcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3467777776 4 46676665 588889999999987777889999999999999999987777888888889988888
Q ss_pred CceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEccc
Q 002189 170 DNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDR 249 (955)
Q Consensus 170 ~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 249 (955)
+|+|+ .+|...|..+.+|++|+|++|++.+..+..|..+++|+.|+|++
T Consensus 121 ~n~l~-------------------------------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 169 (440)
T 3zyj_A 121 DNRLT-------------------------------TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGE 169 (440)
T ss_dssp SSCCS-------------------------------SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCC
T ss_pred CCcCC-------------------------------eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCC
Confidence 88887 44445555566788888888888877788999999999999999
Q ss_pred C-CCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecC
Q 002189 250 N-SLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQI 328 (955)
Q Consensus 250 N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 328 (955)
| .+....+..|.++++|+.|+|++|.|+.+ +.+..+++|++|+|++|+|++ ..|..|.++++|+.|+|++|+|++..
T Consensus 170 ~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~ 247 (440)
T 3zyj_A 170 LKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGNHLSA-IRPGSFQGLMHLQKLWMIQSQIQVIE 247 (440)
T ss_dssp CTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCcceeCcchhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCCccCc-cChhhhccCccCCEEECCCCceeEEC
Confidence 5 55544455799999999999999999966 468889999999999999986 66889999999999999999999999
Q ss_pred CcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCcccc
Q 002189 329 PADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNRISA 373 (955)
Q Consensus 329 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~~ 373 (955)
+..|..+++|+.|+|++|+|++.++..+. +.+|+.|+|++|++.+
T Consensus 248 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 248 RNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred hhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 99999999999999999999988877654 7788899999998874
No 309
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1e-26 Score=270.19 Aligned_cols=269 Identities=23% Similarity=0.271 Sum_probs=193.1
Q ss_pred CcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCC-------------cEEEccCCCC
Q 002189 83 DITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQEL-------------VLLSLNSNGF 149 (955)
Q Consensus 83 ~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l 149 (955)
.-...++|++|++++|+ + +.+|.+|+++++|++|++++|.++|.+|..++++.+| ++|++++|.+
T Consensus 6 ~~~~~~~L~~L~l~~n~-l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 6 RNVSNTFLQEPLRHSSN-L-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred cccccccchhhhcccCc-h-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 33356899999999997 6 8999999999999999999999999999999999875 9999999999
Q ss_pred cCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCcc
Q 002189 150 SGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLT 229 (955)
Q Consensus 150 ~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~ 229 (955)
++ +|.. .++|++|+|++|++++ +|.. +.+|++|++++|+++ .+|.. ..+|++|++++|+++
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---------~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTE-LPEL---------PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLE 144 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSS-CCCC---------CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCS
T ss_pred cc-CCCC---cCCCCEEEccCCcCCc-cccc---------cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCC
Confidence 95 5542 3799999999999996 7743 256788899999998 45542 267999999999999
Q ss_pred ccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhc
Q 002189 230 GELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFS 309 (955)
Q Consensus 230 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~ 309 (955)
+ +| .|+.+++|++|++++|++++ +|..+ .+|++|++++|++++.+ .+.++++|++|++++|.+++ +|..
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~--l~~~-- 213 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK--LPDL-- 213 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS--CCCC--
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc--CCCC--
Confidence 6 67 59999999999999999984 66543 58999999999999854 78889999999999999875 4443
Q ss_pred CCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccccCCCCCCCcceeEec
Q 002189 310 SMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTERGGAPAVNLTLID 389 (955)
Q Consensus 310 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~ 389 (955)
.++|+.|++++|.++ .+| .+..+++|++|+|++|++++.++ . ..+++.|++++|++++++.. ...+..|.+.+
T Consensus 214 -~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~-~--~~~L~~L~l~~N~l~~l~~~-~~~L~~L~ls~ 286 (454)
T 1jl5_A 214 -PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD-L--PPSLEALNVRDNYLTDLPEL-PQSLTFLDVSE 286 (454)
T ss_dssp -CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS-C--CTTCCEEECCSSCCSCCCCC-CTTCCEEECCS
T ss_pred -cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc-c--ccccCEEECCCCcccccCcc-cCcCCEEECcC
Confidence 258999999999998 677 48889999999999999987443 2 36778899999999886643 23334444333
Q ss_pred C
Q 002189 390 N 390 (955)
Q Consensus 390 n 390 (955)
|
T Consensus 287 N 287 (454)
T 1jl5_A 287 N 287 (454)
T ss_dssp S
T ss_pred C
Confidence 3
No 310
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.2e-28 Score=273.17 Aligned_cols=272 Identities=18% Similarity=0.154 Sum_probs=232.9
Q ss_pred CCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcE
Q 002189 62 TNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVL 141 (955)
Q Consensus 62 ~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 141 (955)
+..++..++++.+.+...+...+..+++|++|+|++|+ +.+..|..|.++++|++|+|++|++++..+ |..+++|++
T Consensus 8 ~g~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~ 84 (317)
T 3o53_A 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNP-LSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRT 84 (317)
T ss_dssp ETTEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSC-CCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCE
T ss_pred CcCceeEeeccccchhhhHHHHhccCCCCCEEECcCCc-cCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCE
Confidence 34566777888888877666777888999999999997 888888899999999999999999986555 999999999
Q ss_pred EEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeee
Q 002189 142 LSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHV 221 (955)
Q Consensus 142 L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L 221 (955)
|+|++|+|++.. ..++|++|++++|++++..+.. +.+|+.|++++|+++ .++...+..+++|+.|
T Consensus 85 L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---------~~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L 149 (317)
T 3o53_A 85 LDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---------GQGKKNIYLANNKIT-MLRDLDEGCRSRVQYL 149 (317)
T ss_dssp EECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---------CSSCEEEECCSSCCC-SGGGBCTGGGSSEEEE
T ss_pred EECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---------cCCCCEEECCCCCCC-CccchhhhccCCCCEE
Confidence 999999999533 3489999999999999665433 456899999999999 6766677778899999
Q ss_pred eccCCCccccCCccc-CCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCC
Q 002189 222 LFDSNNLTGELPATL-GLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFD 300 (955)
Q Consensus 222 ~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 300 (955)
+|++|++++..+..+ ..+++|++|+|++|.|++. +. ...+++|+.|+|++|+|++.++.+..+++|++|+|++|+|+
T Consensus 150 ~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp ECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred ECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc
Confidence 999999999888877 4799999999999999954 43 33599999999999999999888999999999999999997
Q ss_pred CCCCChhhcCCCCCCEEECcCCcce-ecCCcCCCCCCCCcEEEee-cCcceeeeCCC
Q 002189 301 ASEVPSWFSSMQSLTTLMMENTNLK-GQIPADLFSIPHLQTVVMK-TNELNGTLDLG 355 (955)
Q Consensus 301 ~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~~~~ 355 (955)
. +|..+..+++|+.|+|++|++. +.++..+..+++|+.|+++ .+.+++..+..
T Consensus 228 ~--l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 228 L--IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp E--ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred c--hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 4 7888999999999999999999 8888899999999999999 55566655443
No 311
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.4e-28 Score=292.70 Aligned_cols=185 Identities=18% Similarity=0.139 Sum_probs=131.0
Q ss_pred eeeccCceEEEEEE-eCCCcEEEEEEcccCCc----------chhHHHHHHHHHHHhc-cCCCcceEEEEEEeCCeEEEE
Q 002189 635 DVGSGGYGKVYKGT-LPNGQLIAIKRAQQGSM----------QGGQEFKMEIELLSRV-HHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 635 ~lG~G~fg~Vy~~~-~~~g~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 702 (955)
..+.|++|.+..++ +--|+.+|||++..... ...++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777777664 34689999999865321 1235699999999999 699999999999999999999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||++|++|.++|...+ +++.. +|+.||+.||+|+|+.| ||||||||+|||+++++.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999998654 55654 48899999999999999 999999999999999999999999999876543
Q ss_pred CCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCC
Q 002189 783 EKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRP 830 (955)
Q Consensus 783 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P 830 (955)
.. .....+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 393 ~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred Cc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 22 2334679999999999875 567789999999998887665444
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=3.6e-27 Score=257.04 Aligned_cols=110 Identities=24% Similarity=0.242 Sum_probs=103.2
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccc-cCCCCCCccccCCCCcEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCS-FSGPIPDSIGSLQELVLL 142 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 142 (955)
.+++.|+|++|.+++..+..|..+++|++|+|++|+ +.+..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV-LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCc-cceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 478999999999998888899999999999999997 888889999999999999999997 886668899999999999
Q ss_pred EccCCCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 143 SLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 143 ~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
+|++|++++..|..|.++++|++|+|++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 142 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCccc
Confidence 99999999888889999999999999999987
No 313
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=3e-27 Score=265.97 Aligned_cols=275 Identities=18% Similarity=0.163 Sum_probs=229.3
Q ss_pred cccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeec
Q 002189 89 ELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDL 168 (955)
Q Consensus 89 ~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 168 (955)
.....++++|+ ++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 32 ~~~~c~~~~~~-l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 32 RNGICKGSSGS-LN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp TTSEEECCSTT-CS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCeEeeCCCCC-cc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 33457888886 44 5677665 48999999999999776778999999999999999999888889999999999999
Q ss_pred CCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCc-cccCCccceeeeeccCC-CccccCCcccCCCCCCcEEE
Q 002189 169 TDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPE-KLFRPDMVLIHVLFDSN-NLTGELPATLGLVKSLEVVR 246 (955)
Q Consensus 169 ~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~-~~~~~~~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~ 246 (955)
++|++++ +|.. .+..+++|++|++++|+++ .+|. ..+..+++|++|++++| .+.+..+..|..+++|++|+
T Consensus 108 s~n~l~~-~~~~-----~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 180 (353)
T 2z80_A 108 SYNYLSN-LSSS-----WFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180 (353)
T ss_dssp CSSCCSS-CCHH-----HHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CCCcCCc-CCHh-----HhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEE
Confidence 9999983 3321 2556778899999999999 7887 78888999999999999 47777788999999999999
Q ss_pred cccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhh---cCCCCCCEEECcCC
Q 002189 247 FDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWF---SSMQSLTTLMMENT 322 (955)
Q Consensus 247 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~---~~l~~L~~L~Ls~N 322 (955)
+++|.+++..|..+..+++|++|+|++|.++..+.. +..+++|++|+|++|.+++. .+..+ .....++.++|++|
T Consensus 181 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~l~~~~~~~~l~~l~L~~~ 259 (353)
T 2z80_A 181 IDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTF-HFSELSTGETNSLIKKFTFRNV 259 (353)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTC-CCC------CCCCCCEEEEESC
T ss_pred CCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccc-cccccccccccchhhccccccc
Confidence 999999988899999999999999999999876664 34589999999999999863 22222 34677889999999
Q ss_pred ccee----cCCcCCCCCCCCcEEEeecCcceeeeCCC-cchhhhhhhcccCCcccccc
Q 002189 323 NLKG----QIPADLFSIPHLQTVVMKTNELNGTLDLG-TSYSENLLVNLQNNRISAYT 375 (955)
Q Consensus 323 ~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~l~~L~L~~N~l~~~~ 375 (955)
.+++ .+|..+..+++|+.|+|++|+|+..++.. ..+.+|+.|+|++|++.+..
T Consensus 260 ~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 260 KITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp BCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 9886 47778889999999999999999766665 35788889999999988644
No 314
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=2.1e-26 Score=253.61 Aligned_cols=247 Identities=22% Similarity=0.241 Sum_probs=190.2
Q ss_pred cEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCc--CCCCCCCCCCcCeeec
Q 002189 91 HTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGR--VPPSIGNLSNLYWLDL 168 (955)
Q Consensus 91 ~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~L~~L~~L~L 168 (955)
+.++.+++. + ..+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+|+.. .+..+..+++|++|+|
T Consensus 10 ~~l~c~~~~-l-~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKG-L-TSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSC-C-SSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCC-c-ccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 356666664 3 34454443 4677777777777744344467777777777777777632 2455556677777777
Q ss_pred CCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCC-cccCCCCCCcEEEc
Q 002189 169 TDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELP-ATLGLVKSLEVVRF 247 (955)
Q Consensus 169 ~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L 247 (955)
++|.++ .+|.. +..+.+|++|++++|++++..+ ..+..+++|++|++
T Consensus 86 s~n~i~-------------------------------~l~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 133 (306)
T 2z66_A 86 SFNGVI-------------------------------TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 133 (306)
T ss_dssp CSCSEE-------------------------------EEEEE-EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEEC
T ss_pred CCCccc-------------------------------cChhh-cCCCCCCCEEECCCCcccccccchhhhhccCCCEEEC
Confidence 777666 23332 2234556677777777765554 67999999999999
Q ss_pred ccCCCCCCccccccCCCCCCEEEccCCcCcc--cCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcce
Q 002189 248 DRNSLSGPVPSNLNNLTSVNDLYLSNNKLTG--AMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 248 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
++|.+++..+..+..+++|+.|+|++|.+++ .+..+..+++|++|+|++|.+++ ..|..|..+++|+.|+|++|+++
T Consensus 134 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 134 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp TTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCC-cCHHHhcCCCCCCEEECCCCccC
Confidence 9999998889999999999999999999987 45578999999999999999976 56888999999999999999999
Q ss_pred ecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-h-hhhhhhcccCCccccc
Q 002189 326 GQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-Y-SENLLVNLQNNRISAY 374 (955)
Q Consensus 326 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~-~~l~~L~L~~N~l~~~ 374 (955)
+..+..+..+++|+.|+|++|++++..+..+. + .+++.|+|++|++++.
T Consensus 213 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 213 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp BCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred ccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 87777899999999999999999998877654 4 3788999999999864
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=272.47 Aligned_cols=236 Identities=20% Similarity=0.179 Sum_probs=189.1
Q ss_pred cccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh
Q 002189 111 NLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML 190 (955)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L 190 (955)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.|++..| |..+++|++|+|++|.|++..+ .
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----------~ 98 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----------G 98 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----------C
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----------C
Confidence 44477777777777776666777777777777777777776555 7777778888888877774322 2
Q ss_pred hccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCcccccc-CCCCCCEE
Q 002189 191 VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLN-NLTSVNDL 269 (955)
Q Consensus 191 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L 269 (955)
++|+.|++++|+|++. +.. .+++|+.|+|++|++++..|..++.+++|+.|+|++|.|++..|..+. .+++|+.|
T Consensus 99 ~~L~~L~L~~N~l~~~-~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRV-SCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCE-EEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCC-Ccc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 5667778888887743 332 236799999999999999899999999999999999999988888886 79999999
Q ss_pred EccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcce
Q 002189 270 YLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELN 349 (955)
Q Consensus 270 ~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 349 (955)
+|++|.|++.++ +..+++|++|+|++|.|++ +|..+..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|++.
T Consensus 175 ~Ls~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 175 NLQYNFIYDVKG-QVVFAKLKTLDLSSNKLAF--MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp ECTTSCCCEEEC-CCCCTTCCEEECCSSCCCE--ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ecCCCccccccc-cccCCCCCEEECCCCCCCC--CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 999999998854 4469999999999999986 56669999999999999999995 7888999999999999999998
Q ss_pred -eeeCCC-cchhhhhhhccc
Q 002189 350 -GTLDLG-TSYSENLLVNLQ 367 (955)
Q Consensus 350 -~~~~~~-~~~~~l~~L~L~ 367 (955)
+.+|.+ ..+..+..++++
T Consensus 251 c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 251 CGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred CcchHHHHHhCCCCcEEecc
Confidence 344443 346667777775
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=8e-27 Score=273.64 Aligned_cols=239 Identities=18% Similarity=0.144 Sum_probs=199.6
Q ss_pred cCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCc
Q 002189 84 ITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNL 163 (955)
Q Consensus 84 l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L 163 (955)
...+++|++|+|++|+ +.+..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|
T Consensus 30 ~~~~~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L 101 (487)
T 3oja_A 30 RQSAWNVKELDLSGNP-LSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSI 101 (487)
T ss_dssp STTGGGCCEEECCSSC-CCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTC
T ss_pred cccCCCccEEEeeCCc-CCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCc
Confidence 3344589999999986 888778888999999999999999886665 8888999999999999885432 3889
Q ss_pred CeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccC-CCCCC
Q 002189 164 YWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLG-LVKSL 242 (955)
Q Consensus 164 ~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~-~l~~L 242 (955)
++|+|++|+|++..+.. +++|+.|+|++|++++ ++...+..+++|+.|+|++|++++..|..+. .+++|
T Consensus 102 ~~L~L~~N~l~~~~~~~---------l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L 171 (487)
T 3oja_A 102 ETLHAANNNISRVSCSR---------GQGKKNIYLANNKITM-LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171 (487)
T ss_dssp CEEECCSSCCCCEEECC---------CSSCEEEECCSSCCCS-GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTC
T ss_pred CEEECcCCcCCCCCccc---------cCCCCEEECCCCCCCC-CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcc
Confidence 99999999988655432 3567888999999984 4444455678899999999999998888886 79999
Q ss_pred cEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCC
Q 002189 243 EVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENT 322 (955)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 322 (955)
+.|+|++|.|++. |. +..+++|+.|+|++|.|++.++.+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|
T Consensus 172 ~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~--lp~~l~~l~~L~~L~l~~N 247 (487)
T 3oja_A 172 EHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL--IEKALRFSQNLEHFDLRGN 247 (487)
T ss_dssp CEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE--ECTTCCCCTTCCEEECTTC
T ss_pred cEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc--cchhhccCCCCCEEEcCCC
Confidence 9999999999955 33 446999999999999999999999999999999999999975 7888999999999999999
Q ss_pred cce-ecCCcCCCCCCCCcEEEee
Q 002189 323 NLK-GQIPADLFSIPHLQTVVMK 344 (955)
Q Consensus 323 ~l~-~~~p~~~~~l~~L~~L~Ls 344 (955)
++. +.+|..+..++.|+.|+++
T Consensus 248 ~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 248 GFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCcCcchHHHHHhCCCCcEEecc
Confidence 998 7788888888888888876
No 317
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=8.9e-25 Score=236.13 Aligned_cols=211 Identities=23% Similarity=0.284 Sum_probs=137.7
Q ss_pred CCccEEeCC-CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCcc
Q 002189 55 NWEGIGCTN-SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSI 133 (955)
Q Consensus 55 ~w~gv~C~~-~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 133 (955)
.|.|+.|.. ..++.+++++++++. +|..+. ++|++|+|++|+ +.+..+..|.++++|++|+|++|+++...+..|
T Consensus 6 ~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~ 81 (270)
T 2o6q_A 6 KKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNK-LSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIF 81 (270)
T ss_dssp GGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSC-CSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTT
T ss_pred CCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCC-CCeeCHHHhcCCCCCCEEECCCCccCeeChhhh
Confidence 799998864 467789999999994 665554 678999999996 777777788888888888888888886555667
Q ss_pred ccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccC
Q 002189 134 GSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFR 213 (955)
Q Consensus 134 ~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~ 213 (955)
..+++|++|+|++|+|++..+..|.++++|++|+|++|++++. +.
T Consensus 82 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------------------------~~---- 126 (270)
T 2o6q_A 82 KELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSL-------------------------------PP---- 126 (270)
T ss_dssp SSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCC-------------------------------CT----
T ss_pred cCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCee-------------------------------CH----
Confidence 8888888888888888866666778888888888888877622 22
Q ss_pred CccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEE
Q 002189 214 PDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYL 292 (955)
Q Consensus 214 ~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L 292 (955)
..|..+++|++|+|++|.|++..+..|..+++|+.|+|++|.|+++++. +..+++|++|
T Consensus 127 --------------------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 186 (270)
T 2o6q_A 127 --------------------RVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTL 186 (270)
T ss_dssp --------------------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred --------------------HHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEE
Confidence 2233344444444444444433333344445555555555555544442 4445555555
Q ss_pred ECcCCCCCCCCCChhhcCCCCCCEEECcCCcce
Q 002189 293 DMSNNSFDASEVPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 293 ~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
+|++|++++ ..+..|..+++|+.|+|++|++.
T Consensus 187 ~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 187 KLDNNQLKR-VPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp ECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCcCCc-CCHHHhccccCCCEEEecCCCee
Confidence 555555543 23334555555666666666554
No 318
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=4e-24 Score=231.75 Aligned_cols=223 Identities=20% Similarity=0.169 Sum_probs=145.2
Q ss_pred cCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcC
Q 002189 72 SGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSG 151 (955)
Q Consensus 72 ~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 151 (955)
.+.+++ .+|..+. ++|++|+|++|+ +.+..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++
T Consensus 15 ~~~~l~-~ip~~l~--~~l~~L~ls~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 15 MELNFY-KIPDNLP--FSTKNLDLSFNP-LRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp TTSCCS-SCCSSSC--TTCCEEECTTCC-CCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred cCCCcc-ccCCCCC--CCccEEECCCCc-ccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc
Confidence 344444 3454443 578999999996 777777788888899999999998887777788888889999999998887
Q ss_pred cCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCcccc
Q 002189 152 RVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGE 231 (955)
Q Consensus 152 ~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~ 231 (955)
..+..|.++++|++|++++|++++..+.. +..+++|++|++++|++++.
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------------------------------~~~l~~L~~L~l~~n~l~~~ 139 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFP-------------------------------IGHLKTLKELNVAHNLIQSF 139 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCC-------------------------------CTTCTTCCEEECCSSCCCCC
T ss_pred cChhhhcCCccccEEECCCCCccccCchh-------------------------------cccCCCCCEEECcCCcccee
Confidence 77778888888888888888887322212 22223344444444444432
Q ss_pred -CCcccCCCCCCcEEEcccCCCCCCccccccCCCCCC----EEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCCh
Q 002189 232 -LPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVN----DLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPS 306 (955)
Q Consensus 232 -~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~ 306 (955)
+|..+..+++|++|+|++|++++..+..+..+++|+ .|++++|.+++.++......+|++|+|++|+
T Consensus 140 ~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~-------- 211 (276)
T 2z62_A 140 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQ-------- 211 (276)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSC--------
T ss_pred cCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCc--------
Confidence 455666666666666666666655555555555554 5666666666555544444445555555554
Q ss_pred hhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCC
Q 002189 307 WFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDL 354 (955)
Q Consensus 307 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 354 (955)
+++..+..+..+++|+.|+|++|++++..+.
T Consensus 212 -----------------l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 212 -----------------LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp -----------------CSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred -----------------eeecCHhHhcccccccEEEccCCcccccCCc
Confidence 4434444456666777777777777665543
No 319
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.4e-25 Score=265.42 Aligned_cols=185 Identities=17% Similarity=0.212 Sum_probs=146.0
Q ss_pred CccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc--------hhHHHHHHHHHHHhccCCCcceEEEEEEeCCeEEEE
Q 002189 631 SDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ--------GGQEFKMEIELLSRVHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 631 ~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 702 (955)
...+.||+|+||+||+|+. .++.+|+|+....... ..+.+.+|++++++++||||+++..++...+..+||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999955 5688899876432211 124589999999999999999777777788888999
Q ss_pred EEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCC
Q 002189 703 YEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDS 782 (955)
Q Consensus 703 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~ 782 (955)
|||+++|+|.++++. +..++.|+++||+|||+.+ |+||||||+|||+++ .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999875 4689999999999999998 999999999999999 9999999999987543
Q ss_pred CCcc-----eeeeeecCCCCCCHHHhhh--CCCCChhhhHHHHHHHHHHHhCCCCC
Q 002189 783 EKDH-----ITTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVLMLELLTGRRPI 831 (955)
Q Consensus 783 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~ksDvwS~Gv~l~elltg~~P~ 831 (955)
.... ......||+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2211 1235679999999999986 66888899999998888888777665
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=8.6e-24 Score=253.17 Aligned_cols=244 Identities=24% Similarity=0.295 Sum_probs=206.7
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++.|+|++|.|+. +|. .+++|++|+|++|+ ++ .+|. .+++|++|+|++|++++ +|. .+++|+.|+
T Consensus 61 ~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~-l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~ 127 (622)
T 3g06_A 61 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQ-LT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLW 127 (622)
T ss_dssp TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCC-CS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCc-CC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEE
Confidence 589999999999994 555 67999999999997 66 4565 77999999999999994 565 678999999
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF 223 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 223 (955)
|++|+|++ +|.. +++|++|+|++|+++ .+|.. +.+|+.|++++|+|+ .+| ....+|+.|+|
T Consensus 128 L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~-~l~~~---------~~~L~~L~L~~N~l~-~l~----~~~~~L~~L~L 188 (622)
T 3g06_A 128 IFGNQLTS-LPVL---PPGLQELSVSDNQLA-SLPAL---------PSELCKLWAYNNQLT-SLP----MLPSGLQELSV 188 (622)
T ss_dssp CCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCCC---------CTTCCEEECCSSCCS-CCC----CCCTTCCEEEC
T ss_pred CCCCCCCc-CCCC---CCCCCEEECcCCcCC-CcCCc---------cCCCCEEECCCCCCC-CCc----ccCCCCcEEEC
Confidence 99999994 6654 489999999999998 45532 356788999999999 687 34578999999
Q ss_pred cCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCC
Q 002189 224 DSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASE 303 (955)
Q Consensus 224 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 303 (955)
++|+|++ +|.. +++|+.|++++|.|+ .+|.. +++|+.|+|++|.|++++ ..+++|++|+|++|+|+.
T Consensus 189 s~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~-- 255 (622)
T 3g06_A 189 SDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTS-- 255 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC--
T ss_pred CCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCc--
Confidence 9999996 4543 479999999999999 56643 589999999999999876 456899999999999975
Q ss_pred CChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc
Q 002189 304 VPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT 356 (955)
Q Consensus 304 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 356 (955)
+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++.++..+
T Consensus 256 lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 256 LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 555 6789999999999999 889999999999999999999998766543
No 321
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.91 E-value=7.4e-29 Score=289.55 Aligned_cols=304 Identities=18% Similarity=0.174 Sum_probs=140.4
Q ss_pred CEeEEEecCCcCcc----ccCcCcCCCCcccEEecCCCCCCccCCCCCcc-ccc----ccccccccccccCC----CCCC
Q 002189 65 RVTSITLSGMGLKG----QLSGDITGLTELHTLDLSNNKDLRGPLPTTIG-NLK----KLSNLMLVGCSFSG----PIPD 131 (955)
Q Consensus 65 ~v~~L~L~~~~l~~----~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~-~l~----~L~~L~Ls~N~l~~----~~p~ 131 (955)
+++.|+|++|++++ .++..+..+++|++|+|++|+ +....+..+. .++ +|++|+|++|+++. .++.
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~-l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE-LGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCc-CChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 45555555555553 233445555555555555554 4332222221 222 45555555555552 3344
Q ss_pred ccccCCCCcEEEccCCCCcCcCCCCC-----CCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCccccc
Q 002189 132 SIGSLQELVLLSLNSNGFSGRVPPSI-----GNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGS 206 (955)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ 206 (955)
.+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|++++.....+ ...+..+++|++|++++|+++..
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l--~~~l~~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL--ASVLRAKPDFKELTVSNNDINEA 185 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH--HHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH--HHHHhhCCCCCEEECcCCCcchH
Confidence 55555555555555555543222221 123445555555555553211000 01233344555555555555432
Q ss_pred CCccccC----CccceeeeeccCCCcccc----CCcccCCCCCCcEEEcccCCCCCCc-----cccccCCCCCCEEEccC
Q 002189 207 IPEKLFR----PDMVLIHVLFDSNNLTGE----LPATLGLVKSLEVVRFDRNSLSGPV-----PSNLNNLTSVNDLYLSN 273 (955)
Q Consensus 207 ip~~~~~----~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~-----p~~l~~l~~L~~L~Ls~ 273 (955)
.+..+.. ...+|++|+|++|++++. ++..+..+++|++|+|++|.+++.. +..+..+++|+.|+|++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 2222211 123555555555555542 3444555555555555555554321 22223455555555555
Q ss_pred CcCccc-----CCCCCCCCCCCEEECcCCCCCCCCCChhhc-----CCCCCCEEECcCCcceec----CCcCCCCCCCCc
Q 002189 274 NKLTGA-----MPNLTGLSVLSYLDMSNNSFDASEVPSWFS-----SMQSLTTLMMENTNLKGQ----IPADLFSIPHLQ 339 (955)
Q Consensus 274 N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~ 339 (955)
|.++.. +..+..+++|++|+|++|.++. ..+..+. ..++|+.|+|++|.+++. ++..+..+++|+
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~-~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 344 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGD-EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLL 344 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH-HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCC
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCch-HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCcc
Confidence 555542 2233445555555555555532 1111121 124555555555555543 333444455555
Q ss_pred EEEeecCcceeeeCCCcc------hhhhhhhcccCCccc
Q 002189 340 TVVMKTNELNGTLDLGTS------YSENLLVNLQNNRIS 372 (955)
Q Consensus 340 ~L~Ls~N~l~~~~~~~~~------~~~l~~L~L~~N~l~ 372 (955)
+|+|++|++++..+..+. ..+++.|+|++|+|+
T Consensus 345 ~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 345 ELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp EEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred EEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 555555555543222111 234555555555555
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=7.9e-24 Score=229.39 Aligned_cols=143 Identities=15% Similarity=0.140 Sum_probs=96.9
Q ss_pred cCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCccc--CCCCCCCCCCCEEECcCCCCCCCCCChhh
Q 002189 231 ELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGA--MPNLTGLSVLSYLDMSNNSFDASEVPSWF 308 (955)
Q Consensus 231 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~ 308 (955)
..+..|..+++|++|++++|.+++..+..+..+++|++|+|++|.+++. +..+..+++|++|+|++|++++ ..+..+
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~ 169 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDL 169 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE-ECGGGG
T ss_pred cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc-CCHHHh
Confidence 3334455555666666666666644444566666666666666666552 2245666666666666666654 344556
Q ss_pred cCCCCCC----EEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc-chhhhhhhcccCCcccccc
Q 002189 309 SSMQSLT----TLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT-SYSENLLVNLQNNRISAYT 375 (955)
Q Consensus 309 ~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~~l~~L~L~~N~l~~~~ 375 (955)
..+++|+ .|++++|.+++..+..+ ...+|+.|+|++|++++.++..+ .+.+|+.|+|++|+|++--
T Consensus 170 ~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp HHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred hhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 5555555 88999999986555544 44589999999999999887764 4778889999999999744
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=4.3e-23 Score=222.88 Aligned_cols=206 Identities=24% Similarity=0.300 Sum_probs=150.6
Q ss_pred cccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccc
Q 002189 115 LSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAK 194 (955)
Q Consensus 115 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~ 194 (955)
++.+++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------- 74 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-------------------- 74 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS--------------------
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC--------------------
Confidence 444555555555 3443332 34555555555555444445555555555555555554
Q ss_pred cccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCC
Q 002189 195 HFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNN 274 (955)
Q Consensus 195 ~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 274 (955)
.+|...|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|
T Consensus 75 -----------~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 143 (270)
T 2o6q_A 75 -----------TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143 (270)
T ss_dssp -----------CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred -----------eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCC
Confidence 333333334444555555555555455556778899999999999999888888999999999999999
Q ss_pred cCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeC
Q 002189 275 KLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLD 353 (955)
Q Consensus 275 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 353 (955)
.|++.++. +..+++|++|+|++|.++. ..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.+..+
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 144 ELQSLPKGVFDKLTSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cCCccCHhHccCCcccceeEecCCcCcE-eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 99998885 7889999999999999986 556678999999999999999997777778899999999999999988765
Q ss_pred CC
Q 002189 354 LG 355 (955)
Q Consensus 354 ~~ 355 (955)
..
T Consensus 223 ~~ 224 (270)
T 2o6q_A 223 GI 224 (270)
T ss_dssp SS
T ss_pred cH
Confidence 43
No 324
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=4.6e-27 Score=274.37 Aligned_cols=327 Identities=17% Similarity=0.153 Sum_probs=246.1
Q ss_pred CCEeEEEecCCcCccccCcCc-CCCC----cccEEecCCCCCCcc----CCCCCcccccccccccccccccCCCCCCccc
Q 002189 64 SRVTSITLSGMGLKGQLSGDI-TGLT----ELHTLDLSNNKDLRG----PLPTTIGNLKKLSNLMLVGCSFSGPIPDSIG 134 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l-~~l~----~L~~L~Ls~N~~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 134 (955)
.+++.|+|++|.+++..+..+ ..++ +|++|+|++|+ +.. .++..|..+++|++|+|++|.+++..+..+.
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~-i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 134 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLC 134 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCC-CCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHH
Confidence 689999999999987554433 3355 79999999997 774 5688899999999999999998754443333
Q ss_pred -----cCCCCcEEEccCCCCcCc----CCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchh-hhhccccccccCCccc
Q 002189 135 -----SLQELVLLSLNSNGFSGR----VPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLD-MLVRAKHFHFGKNQLS 204 (955)
Q Consensus 135 -----~l~~L~~L~Ls~N~l~~~----~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~-~L~~L~~L~L~~N~l~ 204 (955)
.+++|++|+|++|++++. ++..+..+++|++|+|++|.+++..+..+. ..+. .+.+|++|++++|+++
T Consensus 135 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~--~~l~~~~~~L~~L~L~~n~l~ 212 (461)
T 1z7x_W 135 EGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLC--QGLKDSPCQLEALKLESCGVT 212 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH--HHHHHSCCCCCEEECTTSCCB
T ss_pred HHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHH--HHHhcCCCCceEEEccCCCCc
Confidence 356899999999999974 355677789999999999998743221110 0011 1348899999999998
Q ss_pred cc----CCccccCCccceeeeeccCCCccccC-----CcccCCCCCCcEEEcccCCCCCC----ccccccCCCCCCEEEc
Q 002189 205 GS----IPEKLFRPDMVLIHVLFDSNNLTGEL-----PATLGLVKSLEVVRFDRNSLSGP----VPSNLNNLTSVNDLYL 271 (955)
Q Consensus 205 g~----ip~~~~~~~~~L~~L~L~~N~l~~~~-----p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L 271 (955)
+. ++.. +...++|++|++++|++++.. +..+..+++|++|+|++|.++.. ++..+..+++|++|+|
T Consensus 213 ~~~~~~l~~~-l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 291 (461)
T 1z7x_W 213 SDNCRDLCGI-VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSL 291 (461)
T ss_dssp TTHHHHHHHH-HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHHHHHHH-HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEEC
Confidence 42 3332 334678999999999998653 33344689999999999999954 6788888999999999
Q ss_pred cCCcCcccCCC------CCCCCCCCEEECcCCCCCCCC---CChhhcCCCCCCEEECcCCcceecCCcCCCC-----CCC
Q 002189 272 SNNKLTGAMPN------LTGLSVLSYLDMSNNSFDASE---VPSWFSSMQSLTTLMMENTNLKGQIPADLFS-----IPH 337 (955)
Q Consensus 272 s~N~l~~~~~~------~~~l~~L~~L~Ls~N~l~~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~ 337 (955)
++|.+++..+. ....++|++|+|++|.+++.. ++..+..+++|+.|+|++|.+++..+..+.. .++
T Consensus 292 s~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~ 371 (461)
T 1z7x_W 292 AGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSV 371 (461)
T ss_dssp TTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCC
T ss_pred CCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCc
Confidence 99999765431 223479999999999997521 4667788899999999999998765544432 789
Q ss_pred CcEEEeecCccee----eeCCC-cchhhhhhhcccCCcccccc--------CCCCCCCcceeEecCcchh
Q 002189 338 LQTVVMKTNELNG----TLDLG-TSYSENLLVNLQNNRISAYT--------ERGGAPAVNLTLIDNPICQ 394 (955)
Q Consensus 338 L~~L~Ls~N~l~~----~~~~~-~~~~~l~~L~L~~N~l~~~~--------~~~~~~~~~L~~l~n~~c~ 394 (955)
|+.|+|++|++++ .++.. ..+.+|+.|+|++|+|++.. +.....+..|++.++.+..
T Consensus 372 L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 372 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred eEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 9999999999986 44444 34678889999999998652 2334457778887777543
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=8.2e-23 Score=222.93 Aligned_cols=205 Identities=20% Similarity=0.255 Sum_probs=145.4
Q ss_pred cccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchh
Q 002189 109 IGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLD 188 (955)
Q Consensus 109 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~ 188 (955)
++++++|+.|++++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+ . .
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-------~ 74 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-------G 74 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-------S
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-------C
Confidence 455556666666666666 4454443 466666777777666556666666777777777666663211 1 1
Q ss_pred hhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCE
Q 002189 189 MLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVND 268 (955)
Q Consensus 189 ~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 268 (955)
.+++ |+.|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|+.
T Consensus 75 ~l~~-------------------------L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~ 128 (290)
T 1p9a_G 75 TLPV-------------------------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQE 128 (290)
T ss_dssp CCTT-------------------------CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCE
T ss_pred CCCc-------------------------CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCE
Confidence 2223 333333344333 45556677788888888888888666778888888888
Q ss_pred EEccCCcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCc
Q 002189 269 LYLSNNKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNE 347 (955)
Q Consensus 269 L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 347 (955)
|+|++|+|++.++. +..+++|+.|+|++|+|+. ..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+
T Consensus 129 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE-LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNP 206 (290)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC-CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCC
T ss_pred EECCCCCCCccChhhcccccCCCEEECCCCcCCc-cCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCC
Confidence 88888888887774 6778888888888888875 45566788999999999999998 788888889999999999999
Q ss_pred ceeee
Q 002189 348 LNGTL 352 (955)
Q Consensus 348 l~~~~ 352 (955)
+.+..
T Consensus 207 ~~C~c 211 (290)
T 1p9a_G 207 WLCNC 211 (290)
T ss_dssp BCCSG
T ss_pred ccCcC
Confidence 98754
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=232.22 Aligned_cols=203 Identities=17% Similarity=0.163 Sum_probs=117.6
Q ss_pred CCcEEEccCCCCcCcCCCCC--CCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCc
Q 002189 138 ELVLLSLNSNGFSGRVPPSI--GNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPD 215 (955)
Q Consensus 138 ~L~~L~Ls~N~l~~~~p~~~--~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~ 215 (955)
+|++|+|++|.+++..|..+ .++++|++|+|++|++++..|..- ...+..+++|++|+|++|+++ .++...+..+
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~--~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~~l 168 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLA--ELQQWLKPGLKVLSIAQAHSP-AFSCEQVRAF 168 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHH--HHHTTBCSCCCEEEEECCSSC-CCCTTSCCCC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhH--HHHhhhccCCCEEEeeCCCcc-hhhHHHhccC
Confidence 34444444444444444444 444444444444444443221000 000112334444455555554 3444444455
Q ss_pred cceeeeeccCCCcccc--C--CcccCCCCCCcEEEcccCCCCCCccc----cccCCCCCCEEEccCCcCcccC-CCCCCC
Q 002189 216 MVLIHVLFDSNNLTGE--L--PATLGLVKSLEVVRFDRNSLSGPVPS----NLNNLTSVNDLYLSNNKLTGAM-PNLTGL 286 (955)
Q Consensus 216 ~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~Ls~N~l~~~~p~----~l~~l~~L~~L~Ls~N~l~~~~-~~~~~l 286 (955)
++|++|+|++|++.+. + +..+..+++|++|+|++|+++ .++. .+..+++|++|+|++|+|++.. +.+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 5566666666665542 1 223356777777888888776 3333 2466778888888888887773 344444
Q ss_pred ---CCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCccee
Q 002189 287 ---SVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 287 ---~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
++|++|+|++|+|+. +|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 248 ~~~~~L~~L~Ls~N~l~~--lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLEQ--VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCCS--CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCCc--hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 688888888888863 565553 6888888888888853 33 6677888888888888864
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=7.1e-23 Score=221.41 Aligned_cols=227 Identities=20% Similarity=0.228 Sum_probs=158.8
Q ss_pred cccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh
Q 002189 111 NLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML 190 (955)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L 190 (955)
.+.++..+++..+.+.... .+..+++|+.|++++|.++. + ..+..+++|++|+|++|++++ + ..+..+
T Consensus 17 ~~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-------~~l~~l 84 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-------SALKEL 84 (272)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-------GGGTTC
T ss_pred hHHHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-------hhhcCC
Confidence 3455666677777666432 35667777777777777773 3 347777777777777777762 1 123333
Q ss_pred hccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEE
Q 002189 191 VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLY 270 (955)
Q Consensus 191 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 270 (955)
++ |++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+
T Consensus 85 ~~-------------------------L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 85 TN-------------------------LTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TT-------------------------CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CC-------------------------CCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 33 44444444444444455566777777777777777766666677778888888
Q ss_pred ccCCcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcce
Q 002189 271 LSNNKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELN 349 (955)
Q Consensus 271 Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 349 (955)
|++|.+++.++. +..+++|++|+|++|++++ ..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCc-cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 888888777764 5677888888888888875 45566788888888888888888777777888888888888888887
Q ss_pred eeeCCCcchhhhhhhcccCCccccccCCCCCC
Q 002189 350 GTLDLGTSYSENLLVNLQNNRISAYTERGGAP 381 (955)
Q Consensus 350 ~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~ 381 (955)
+..| .+..|++..|.+++..|.....
T Consensus 219 ~~~~------~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 219 CTCP------GIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTT------TTHHHHHHHHHTGGGBBCTTSC
T ss_pred ccCc------HHHHHHHHHHhCCCcccCcccc
Confidence 6544 5678888889888877765543
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=2.2e-23 Score=225.45 Aligned_cols=204 Identities=19% Similarity=0.258 Sum_probs=97.4
Q ss_pred cccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchh
Q 002189 109 IGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLD 188 (955)
Q Consensus 109 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~ 188 (955)
+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + ..+.++++|++|+|++|++++..+..++
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~------ 106 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFD------ 106 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTT------
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhc------
Confidence 445555555555555555 222 25555555555555555553 2 2455555555555555555522221111
Q ss_pred hhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCE
Q 002189 189 MLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVND 268 (955)
Q Consensus 189 ~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 268 (955)
.+++|++|+|++| ++++..+..|..+++|++|+|++|.+++..+..|..+++|+.
T Consensus 107 ~l~~L~~L~L~~n-------------------------~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 107 KLTNLKELVLVEN-------------------------QLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TCTTCCEEECTTS-------------------------CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCcCCCEEECCCC-------------------------cCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 1222222233333 333233333444444555555555554444444445555555
Q ss_pred EEccCCcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCc
Q 002189 269 LYLSNNKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNE 347 (955)
Q Consensus 269 L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 347 (955)
|+|++|++++.++. +..+++|++|+|++|++++ ..+..+..+++|+.|+|++|++.+ .+++|+.|++..|+
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~ 233 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINK 233 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHH
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCc-cCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHh
Confidence 55555555544443 3445555555555555543 333444555555555555555542 23345555666666
Q ss_pred ceeeeCCC
Q 002189 348 LNGTLDLG 355 (955)
Q Consensus 348 l~~~~~~~ 355 (955)
++|.+|..
T Consensus 234 ~~g~ip~~ 241 (272)
T 3rfs_A 234 HSGVVRNS 241 (272)
T ss_dssp TGGGBBCT
T ss_pred CCCcccCc
Confidence 66555544
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.9e-23 Score=218.94 Aligned_cols=199 Identities=22% Similarity=0.244 Sum_probs=133.4
Q ss_pred CcccEEecCCCCCCccCCCCCcccccccccccccccc-cCCCCCCccccCCCCcEEEccC-CCCcCcCCCCCCCCCCcCe
Q 002189 88 TELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCS-FSGPIPDSIGSLQELVLLSLNS-NGFSGRVPPSIGNLSNLYW 165 (955)
Q Consensus 88 ~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~L~~L~~ 165 (955)
++|++|+|++|+ +++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|++
T Consensus 31 ~~l~~L~l~~n~-l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETH-LRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCC-CSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCc-ceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 389999999997 888877789999999999999997 8866667899999999999998 9999777778999999999
Q ss_pred eecCCceeeeccCCCCCCCCchhhhhccccccccCC-cccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCc-
Q 002189 166 LDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKN-QLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLE- 243 (955)
Q Consensus 166 L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N-~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~- 243 (955)
|+|++|++++ +|. +..++.+ ..|+.|++++| +++ .+|. ..|..+++|+
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L---~~L~~L~l~~N~~l~-~i~~------------------------~~~~~l~~L~~ 159 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYST---DIFFILEITDNPYMT-SIPV------------------------NAFQGLCNETL 159 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBC---CSEEEEEEESCTTCC-EECT------------------------TTTTTTBSSEE
T ss_pred EeCCCCCCcc-ccc-ccccccc---ccccEEECCCCcchh-hcCc------------------------ccccchhccee
Confidence 9999999984 554 3332222 11335555555 554 3444 4455555555
Q ss_pred EEEcccCCCCCCccccccCCCCCCEEEccCCc-CcccCC-CCCCC-CCCCEEECcCCCCCCCCCChhhcCCCCCCEEECc
Q 002189 244 VVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNK-LTGAMP-NLTGL-SVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMME 320 (955)
Q Consensus 244 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~-~~~~l-~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls 320 (955)
.|++++|+++ .+|......++|+.|+|++|+ ++++++ .+.++ ++|+.|+|++|+++. +|.. .+++|+.|+++
T Consensus 160 ~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~--l~~~--~~~~L~~L~l~ 234 (239)
T 2xwt_C 160 TLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA--LPSK--GLEHLKELIAR 234 (239)
T ss_dssp EEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC--CCCT--TCTTCSEEECT
T ss_pred EEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc--CChh--HhccCceeecc
Confidence 5555555555 333332222556666666663 655544 24555 666666666666643 3322 45566666666
Q ss_pred CC
Q 002189 321 NT 322 (955)
Q Consensus 321 ~N 322 (955)
++
T Consensus 235 ~~ 236 (239)
T 2xwt_C 235 NT 236 (239)
T ss_dssp TC
T ss_pred Cc
Confidence 54
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.6e-23 Score=228.21 Aligned_cols=226 Identities=14% Similarity=0.125 Sum_probs=156.4
Q ss_pred cccEEecCCCCCCccCC-CC--CcccccccccccccccccCCCCCCcc--ccCCCCcEEEccCCCCcCcCC----CCCCC
Q 002189 89 ELHTLDLSNNKDLRGPL-PT--TIGNLKKLSNLMLVGCSFSGPIPDSI--GSLQELVLLSLNSNGFSGRVP----PSIGN 159 (955)
Q Consensus 89 ~L~~L~Ls~N~~l~~~~-p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 159 (955)
.++.|.+.++. +.... .. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.|++..+ ..+..
T Consensus 65 ~l~~l~l~~~~-~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 65 RVRRLTVGAAQ-VPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCEEEECSCC-CBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred ceeEEEEeCCc-CCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 45667777664 33210 00 12234557777777777777777766 777777777777777776444 23446
Q ss_pred CCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCccccc--CC-ccccCCccceeeeeccCCCcccc--CCc
Q 002189 160 LSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGS--IP-EKLFRPDMVLIHVLFDSNNLTGE--LPA 234 (955)
Q Consensus 160 L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~--ip-~~~~~~~~~L~~L~L~~N~l~~~--~p~ 234 (955)
+++|++|+|++|++++..|..++ .+++|++|+|++|++.+. ++ ...+..+++|++|+|++|+++.. .+.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~------~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~ 217 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVR------AFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCA 217 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCC------CCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhc------cCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHH
Confidence 77777777777777655554443 345567777777776542 22 22335566788888888888622 122
Q ss_pred -ccCCCCCCcEEEcccCCCCCCccccccCC---CCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcC
Q 002189 235 -TLGLVKSLEVVRFDRNSLSGPVPSNLNNL---TSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSS 310 (955)
Q Consensus 235 -~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~ 310 (955)
.++.+++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+.++..+. ++|++|+|++|+|++ +|. +..
T Consensus 218 ~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~--~~~-~~~ 292 (310)
T 4glp_A 218 ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNR--APQ-PDE 292 (310)
T ss_dssp HHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCS--CCC-TTS
T ss_pred HHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCC--Cch-hhh
Confidence 35778899999999999997778777776 699999999999997766664 789999999999976 333 678
Q ss_pred CCCCCEEECcCCccee
Q 002189 311 MQSLTTLMMENTNLKG 326 (955)
Q Consensus 311 l~~L~~L~Ls~N~l~~ 326 (955)
+++|+.|+|++|+++.
T Consensus 293 l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 293 LPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCCSCEECSSTTTSC
T ss_pred CCCccEEECcCCCCCC
Confidence 8999999999999874
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=2.7e-22 Score=218.86 Aligned_cols=201 Identities=22% Similarity=0.267 Sum_probs=92.9
Q ss_pred CCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcC
Q 002189 85 TGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLY 164 (955)
Q Consensus 85 ~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~ 164 (955)
.++++|+++++++|+ ++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.|++..+ . ..+++|+
T Consensus 7 ~~l~~l~~l~~~~~~-l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 7 SKVASHLEVNCDKRN-LT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp ECSTTCCEEECTTSC-CS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred cccCCccEEECCCCC-CC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 344455555555554 32 3333332 345555555555554444555555555555555555553222 1 4555555
Q ss_pred eeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcE
Q 002189 165 WLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEV 244 (955)
Q Consensus 165 ~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 244 (955)
+|+|++|+|+ .+|..+ ..+++|++|+|++|+|+ .+|. ..|..+++|++
T Consensus 81 ~L~Ls~N~l~-~l~~~~------~~l~~L~~L~l~~N~l~-~l~~------------------------~~~~~l~~L~~ 128 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLG------QTLPALTVLDVSFNRLT-SLPL------------------------GALRGLGELQE 128 (290)
T ss_dssp EEECCSSCCS-SCCCCT------TTCTTCCEEECCSSCCC-CCCS------------------------STTTTCTTCCE
T ss_pred EEECCCCcCC-cCchhh------ccCCCCCEEECCCCcCc-ccCH------------------------HHHcCCCCCCE
Confidence 5555555554 333221 11222233333333333 3333 33444444444
Q ss_pred EEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCc
Q 002189 245 VRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTN 323 (955)
Q Consensus 245 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 323 (955)
|+|++|+|++..+..|..+++|+.|+|++|+|+++++. +..+++|++|+|++|+|+ .+|..+..+.+|+.|+|++|+
T Consensus 129 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~--~ip~~~~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY--TIPKGFFGSHLLPFAFLHGNP 206 (290)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCCCSEEECCSCC
T ss_pred EECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC--ccChhhcccccCCeEEeCCCC
Confidence 44444444433334444444455555555555444442 334455555555555553 244444444455555555555
Q ss_pred ce
Q 002189 324 LK 325 (955)
Q Consensus 324 l~ 325 (955)
+.
T Consensus 207 ~~ 208 (290)
T 1p9a_G 207 WL 208 (290)
T ss_dssp BC
T ss_pred cc
Confidence 44
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.7e-22 Score=215.64 Aligned_cols=189 Identities=24% Similarity=0.330 Sum_probs=133.7
Q ss_pred CCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCC
Q 002189 52 CGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPD 131 (955)
Q Consensus 52 C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 131 (955)
|+ .|.|++|.. ..+.+++++++++ .+|..+. ++|+.|+|++|+ +.+..+..|.++++|++|+|++|+|++..+.
T Consensus 4 Cp-~~~gC~C~~-~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 4 CE-TVTGCTCNE-GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTG-LATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp CH-HHHSSEEEG-GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred CC-CCCceEcCC-CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCC-cCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 54 699999953 3447899999888 5555554 578888888886 7777777888888888888888888877777
Q ss_pred ccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccc
Q 002189 132 SIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKL 211 (955)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~ 211 (955)
.|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|.
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------------~~~~-- 124 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-------------------------------SLPS-- 124 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------------CCCT--
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC-------------------------------CcCh--
Confidence 7888888888888888888666667777888888887777776 2222
Q ss_pred cCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCC
Q 002189 212 FRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLS 290 (955)
Q Consensus 212 ~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~ 290 (955)
..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.++ .+..+++|+
T Consensus 125 ----------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 182 (251)
T 3m19_A 125 ----------------------GVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQ 182 (251)
T ss_dssp ----------------------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred ----------------------hHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCC
Confidence 223445556666666666664444456666666666666666666655 355666677
Q ss_pred EEECcCCCCCC
Q 002189 291 YLDMSNNSFDA 301 (955)
Q Consensus 291 ~L~Ls~N~l~~ 301 (955)
+|+|++|++++
T Consensus 183 ~L~l~~N~~~c 193 (251)
T 3m19_A 183 TITLFGNQFDC 193 (251)
T ss_dssp EEECCSCCBCT
T ss_pred EEEeeCCceeC
Confidence 77777776654
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5.6e-22 Score=218.39 Aligned_cols=198 Identities=22% Similarity=0.380 Sum_probs=135.0
Q ss_pred cccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchh
Q 002189 109 IGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLD 188 (955)
Q Consensus 109 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~ 188 (955)
+..+++|++|++++|.++ .+| .+..+++|++|+|++|+|++..+ +..+++|++|+|++|++++ + +.+.
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-------~~~~ 104 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-------SAIA 104 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-------GGGT
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-------hhhc
Confidence 445666666666666666 344 36666666666666666664333 6666666666666666652 1 1233
Q ss_pred hhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCE
Q 002189 189 MLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVND 268 (955)
Q Consensus 189 ~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 268 (955)
.+.+ |++|+|++|++++ ++ .+..+++|+.|+|++|.+++..+ +..+++|+.
T Consensus 105 ~l~~-------------------------L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 155 (308)
T 1h6u_A 105 GLQS-------------------------IKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQY 155 (308)
T ss_dssp TCTT-------------------------CCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred CCCC-------------------------CCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccE
Confidence 3333 4444444444443 22 26777888888888888875433 778888888
Q ss_pred EEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcc
Q 002189 269 LYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNEL 348 (955)
Q Consensus 269 L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 348 (955)
|+|++|.+++.++ +..+++|+.|+|++|.+++ ++. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++
T Consensus 156 L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 156 LSIGNAQVSDLTP-LANLSKLTTLKADDNKISD--ISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp EECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC--CGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEE
T ss_pred EEccCCcCCCChh-hcCCCCCCEEECCCCccCc--Chh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCee
Confidence 8888888887666 7788888888888888865 333 7888899999999999986553 78899999999999999
Q ss_pred eeeeC
Q 002189 349 NGTLD 353 (955)
Q Consensus 349 ~~~~~ 353 (955)
++.+.
T Consensus 230 ~~~~~ 234 (308)
T 1h6u_A 230 TNQPV 234 (308)
T ss_dssp ECCCE
T ss_pred ecCCe
Confidence 87443
No 334
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=3.5e-22 Score=216.70 Aligned_cols=152 Identities=12% Similarity=0.046 Sum_probs=121.4
Q ss_pred HHHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCc------------------chhHHHHHHHHHHHhccC
Q 002189 622 EVKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSM------------------QGGQEFKMEIELLSRVHH 683 (955)
Q Consensus 622 el~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H 683 (955)
.+......|...+.||+|+||.||+|+..+|+.||||+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444456667799999999999999997799999999874322 12456889999999999
Q ss_pred CCcceEEEEEEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEc
Q 002189 684 KNLVSLLGFCFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLD 763 (955)
Q Consensus 684 ~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~ 763 (955)
| +++.+++.. +..++||||+++|+|.+ +... ....++.|+++||+|||+.+ |+||||||+|||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~~--------~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRVE--------NPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS 227 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCCS--------CHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cchh--------hHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE
Confidence 4 566665433 55699999999999998 5321 23469999999999999998 99999999999999
Q ss_pred CCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhh
Q 002189 764 ERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMT 805 (955)
Q Consensus 764 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 805 (955)
++.+||+|||+|+. +..|+|||++..
T Consensus 228 -~~~vkl~DFG~a~~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE---------------VGEEGWREILER 253 (282)
T ss_dssp -TTEEEECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred -CCcEEEEECCCCeE---------------CCCCCHHHHHHH
Confidence 99999999999863 345789999853
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=2.7e-24 Score=242.66 Aligned_cols=257 Identities=18% Similarity=0.165 Sum_probs=167.5
Q ss_pred EEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCC----CCccccc-ccccccccccccCCCCCCccccC-----C
Q 002189 68 SITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLP----TTIGNLK-KLSNLMLVGCSFSGPIPDSIGSL-----Q 137 (955)
Q Consensus 68 ~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 137 (955)
.++|+.++++|.+|..+...++|++|+|++|+ +.+..+ ..|.+++ +|++|+|++|.+++..+..|..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~-l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNN-LYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSC-GGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCC-CChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 35778888888877777777778888888886 666655 5667777 78888888888886666666665 7
Q ss_pred CCcEEEccCCCCcCcCCCCCC----CC-CCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCcccc
Q 002189 138 ELVLLSLNSNGFSGRVPPSIG----NL-SNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLF 212 (955)
Q Consensus 138 ~L~~L~Ls~N~l~~~~p~~~~----~L-~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~ 212 (955)
+|++|+|++|+|++..+..+. .+ ++|++|+|++|++++..+..+. ..+..+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~--~~l~~~---------------------- 136 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFK--QAFSNL---------------------- 136 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH--HHHTTS----------------------
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHH--HHHHhC----------------------
Confidence 888888888888765555433 33 6788888888877632221110 001110
Q ss_pred CCccceeeeeccCCCcccc----CCcccCCCC-CCcEEEcccCCCCCCccccc----cCC-CCCCEEEccCCcCccc---
Q 002189 213 RPDMVLIHVLFDSNNLTGE----LPATLGLVK-SLEVVRFDRNSLSGPVPSNL----NNL-TSVNDLYLSNNKLTGA--- 279 (955)
Q Consensus 213 ~~~~~L~~L~L~~N~l~~~----~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l----~~l-~~L~~L~Ls~N~l~~~--- 279 (955)
..+|++|+|++|++++. ++..+..++ +|++|+|++|+|++..+..+ ..+ ++|+.|+|++|.|++.
T Consensus 137 --~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~ 214 (362)
T 3goz_A 137 --PASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA 214 (362)
T ss_dssp --CTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH
T ss_pred --CCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH
Confidence 12455555555555532 233444454 77778888887776555433 334 5788888888887762
Q ss_pred --CCCCCC-CCCCCEEECcCCCCCCCCC---ChhhcCCCCCCEEECcCCccee-------cCCcCCCCCCCCcEEEeecC
Q 002189 280 --MPNLTG-LSVLSYLDMSNNSFDASEV---PSWFSSMQSLTTLMMENTNLKG-------QIPADLFSIPHLQTVVMKTN 346 (955)
Q Consensus 280 --~~~~~~-l~~L~~L~Ls~N~l~~~~~---p~~~~~l~~L~~L~Ls~N~l~~-------~~p~~~~~l~~L~~L~Ls~N 346 (955)
+..+.. .++|++|+|++|.++.... ...+..+++|+.|+|++|.+.+ .++..+..+++|+.|||++|
T Consensus 215 ~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N 294 (362)
T 3goz_A 215 ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGK 294 (362)
T ss_dssp HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCC
Confidence 223333 3478888888888765211 2344667788888888887432 34456778888899999999
Q ss_pred cceee
Q 002189 347 ELNGT 351 (955)
Q Consensus 347 ~l~~~ 351 (955)
++...
T Consensus 295 ~l~~~ 299 (362)
T 3goz_A 295 EIHPS 299 (362)
T ss_dssp BCCGG
T ss_pred cCCCc
Confidence 88765
No 336
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.4e-21 Score=219.24 Aligned_cols=246 Identities=17% Similarity=0.194 Sum_probs=159.0
Q ss_pred CCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCC-
Q 002189 52 CGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIP- 130 (955)
Q Consensus 52 C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p- 130 (955)
|.|.|..|.|+ +++++ .+|..+ .++|++|+|++|+ ++...+..|.++++|++|+|++|++.+.+|
T Consensus 7 C~C~~~~v~C~----------~~~Lt-~iP~~l--~~~l~~L~Ls~N~-i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 7 CHCSNRVFLCQ----------ESKVT-EIPSDL--PRNAIELRFVLTK-LRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp SEEETTEEEEE----------STTCC-SCCTTC--CTTCSEEEEESCC-CSEECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred cEeeCCEEEec----------CCCCC-ccCcCc--CCCCCEEEccCCc-CCCcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 55556666665 45555 456555 3689999999997 877767789999999999999999876666
Q ss_pred CccccCCCCcE-EEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCc
Q 002189 131 DSIGSLQELVL-LSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPE 209 (955)
Q Consensus 131 ~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~ 209 (955)
..|.++++|++ +.++.|+|+...|..|.++++|++|++++|+|++..+..+.. ..++..|++.+
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~------~~~l~~l~l~~--------- 137 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH------SLQKVLLDIQD--------- 137 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCC------BSSCEEEEEES---------
T ss_pred hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcc------cchhhhhhhcc---------
Confidence 46889988775 667789999877889999999999999999998333222111 11223333322
Q ss_pred cccCCccceeeeeccCCCccccCCcccCCCC-CCcEEEcccCCCCCCccccccCCCCCCEEEccC-CcCcccCCC-CCCC
Q 002189 210 KLFRPDMVLIHVLFDSNNLTGELPATLGLVK-SLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSN-NKLTGAMPN-LTGL 286 (955)
Q Consensus 210 ~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~-~~~l 286 (955)
.|++....+..|..+. .++.|+|++|+|+ .+|.......+|+.|++++ |.++.+++. |.++
T Consensus 138 ---------------~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l 201 (350)
T 4ay9_X 138 ---------------NINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGA 201 (350)
T ss_dssp ---------------CTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTE
T ss_pred ---------------ccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccC
Confidence 1333333333444443 4566666666666 4444444455666666653 555555553 5666
Q ss_pred CCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCc
Q 002189 287 SVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNE 347 (955)
Q Consensus 287 ~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 347 (955)
++|++|||++|+|+. +|. ..+.+|+.|.+.++.-...+| .+.++++|+.++++++.
T Consensus 202 ~~L~~LdLs~N~l~~--lp~--~~~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 202 SGPVILDISRTRIHS--LPS--YGLENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp ECCSEEECTTSCCCC--CCS--SSCTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred cccchhhcCCCCcCc--cCh--hhhccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 777777777777654 332 234555566555544344566 36777888888876554
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=6.7e-22 Score=209.38 Aligned_cols=196 Identities=15% Similarity=0.196 Sum_probs=139.4
Q ss_pred ccccccccccccCCCCCCccccCCCCcEEEccCCC-CcCcCCCCCCCCCCcCeeecCC-ceeeeccCCCCCCCCchhhhh
Q 002189 114 KLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNG-FSGRVPPSIGNLSNLYWLDLTD-NKLEGEIPVSDGNSPGLDMLV 191 (955)
Q Consensus 114 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~L~~L~~L~L~~-N~l~g~ip~~~~~~~~l~~L~ 191 (955)
+|++|+|++|++++..+..|.++++|++|+|++|+ ++...+..|.++++|++|+|++ |++++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~---------------- 95 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY---------------- 95 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE----------------
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE----------------
Confidence 78888888888886666678888888888888886 8766666788888888888887 77772
Q ss_pred ccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCc---EEEcccC-CCCCCccccccCCCCCC
Q 002189 192 RAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLE---VVRFDRN-SLSGPVPSNLNNLTSVN 267 (955)
Q Consensus 192 ~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~~~~p~~l~~l~~L~ 267 (955)
+|...|..+++|++|++++|++++ +|. |..+++|+ +|++++| .+++..+..|.++++|+
T Consensus 96 ---------------i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 96 ---------------IDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET 158 (239)
T ss_dssp ---------------ECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE
T ss_pred ---------------cCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcce
Confidence 333333334445555555555553 444 66666666 8888888 88766566688888888
Q ss_pred -EEEccCCcCcccCCCCCCCCCCCEEECcCCC-CCCCCCChhhcCC-CCCCEEECcCCcceecCCcCCCCCCCCcEEEee
Q 002189 268 -DLYLSNNKLTGAMPNLTGLSVLSYLDMSNNS-FDASEVPSWFSSM-QSLTTLMMENTNLKGQIPADLFSIPHLQTVVMK 344 (955)
Q Consensus 268 -~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 344 (955)
.|+|++|.++.+++.....++|+.|+|++|+ ++. ..+..|.++ ++|+.|+|++|+++ .+|.. .+++|+.|+++
T Consensus 159 ~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~-i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~ 234 (239)
T 2xwt_C 159 LTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTV-IDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIAR 234 (239)
T ss_dssp EEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCE-ECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECT
T ss_pred eEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCccc-CCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeecc
Confidence 8888888888766654444788888888884 764 445667777 78888888888887 34443 56677777777
Q ss_pred cC
Q 002189 345 TN 346 (955)
Q Consensus 345 ~N 346 (955)
++
T Consensus 235 ~~ 236 (239)
T 2xwt_C 235 NT 236 (239)
T ss_dssp TC
T ss_pred Cc
Confidence 65
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=4.2e-21 Score=204.88 Aligned_cols=181 Identities=21% Similarity=0.315 Sum_probs=128.0
Q ss_pred ccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhcc
Q 002189 114 KLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRA 193 (955)
Q Consensus 114 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L 193 (955)
..++++++++.++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~------------------- 72 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ------------------- 72 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-------------------
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC-------------------
Confidence 3455556666555 4444443 35555666666655555555555555555555555554
Q ss_pred ccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccC
Q 002189 194 KHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSN 273 (955)
Q Consensus 194 ~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 273 (955)
+..+..|..+++|++|+|++|.|++..+..|..+++|+.|+|++
T Consensus 73 ------------------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 116 (251)
T 3m19_A 73 ------------------------------------TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116 (251)
T ss_dssp ------------------------------------CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ------------------------------------ccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCC
Confidence 33344566677777888888888766667777888888888888
Q ss_pred CcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeee
Q 002189 274 NKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTL 352 (955)
Q Consensus 274 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 352 (955)
|+|++.++. +..+++|++|+|++|+|++ ..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..
T Consensus 117 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CcCCCcChhHhccCCcccEEECcCCcCCc-cCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 888877775 5778888888888888875 45557888888999999999988777778888999999999999998764
Q ss_pred C
Q 002189 353 D 353 (955)
Q Consensus 353 ~ 353 (955)
.
T Consensus 196 ~ 196 (251)
T 3m19_A 196 C 196 (251)
T ss_dssp T
T ss_pred c
Confidence 3
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=3.9e-24 Score=238.64 Aligned_cols=262 Identities=14% Similarity=0.170 Sum_probs=175.5
Q ss_pred CCccEEeCCCCEeEEEecCCcCccccCcCcCCC--CcccEEecCCCCCCccCCCCCcccccccccccccccccCCC-CCC
Q 002189 55 NWEGIGCTNSRVTSITLSGMGLKGQLSGDITGL--TELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGP-IPD 131 (955)
Q Consensus 55 ~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l--~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~ 131 (955)
.|.++.|+...++.|+++++.+. +..+..+ ++++.|++++|. +.+..+. +.++++|++|+|++|.+++. +|.
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~-l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~ 112 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSF-MDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHG 112 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCE-ECSCCCS-CCCCBCCCEEECTTCEECHHHHHH
T ss_pred HHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCcc-ccccchh-hccCCCCCEEEccCCCcCHHHHHH
Confidence 69999888778999999999887 4556666 899999999996 7776665 66799999999999998865 788
Q ss_pred ccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCc-eeeec-cCCCCCCCCchhhhhccccccccCC-cccccCC
Q 002189 132 SIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDN-KLEGE-IPVSDGNSPGLDMLVRAKHFHFGKN-QLSGSIP 208 (955)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N-~l~g~-ip~~~~~~~~l~~L~~L~~L~L~~N-~l~g~ip 208 (955)
.+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. +|. .+..+++|++|++++| +++
T Consensus 113 ~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~------~~~~~~~L~~L~l~~~~~l~---- 182 (336)
T 2ast_B 113 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT------LLSSCSRLDELNLSWCFDFT---- 182 (336)
T ss_dssp HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHH------HHHHCTTCCEEECCCCTTCC----
T ss_pred HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHH------HHhcCCCCCEEcCCCCCCcC----
Confidence 8899999999999999999888888889999999999999 56632 221 1334455555555555 554
Q ss_pred ccccCCccceeeeeccCCCcccc-CCcccCCCC-CCcEEEcccC--CCC-CCccccccCCCCCCEEEccCCc-Cccc-CC
Q 002189 209 EKLFRPDMVLIHVLFDSNNLTGE-LPATLGLVK-SLEVVRFDRN--SLS-GPVPSNLNNLTSVNDLYLSNNK-LTGA-MP 281 (955)
Q Consensus 209 ~~~~~~~~~L~~L~L~~N~l~~~-~p~~l~~l~-~L~~L~Ls~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~-~~ 281 (955)
+. ++..+..++ +|++|+|++| .++ +.+|..+..+++|+.|+|++|. +++. ++
T Consensus 183 ---------------------~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 241 (336)
T 2ast_B 183 ---------------------EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ 241 (336)
T ss_dssp ---------------------HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGG
T ss_pred ---------------------hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHH
Confidence 32 344455556 6666666666 343 3445555666666666666666 4432 33
Q ss_pred CCCCCCCCCEEECcCCC-CCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCC-CCCcEEEeecCcceeeeCCCcc
Q 002189 282 NLTGLSVLSYLDMSNNS-FDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSI-PHLQTVVMKTNELNGTLDLGTS 357 (955)
Q Consensus 282 ~~~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~ 357 (955)
.+..+++|++|+|++|. +.. .....+.++++|+.|+|++| +.. ..+..+ .+|+.|++++|++++..|....
T Consensus 242 ~l~~l~~L~~L~l~~~~~~~~-~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 242 EFFQLNYLQHLSLSRCYDIIP-ETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGGGCTTCCEEECTTCTTCCG-GGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HHhCCCCCCEeeCCCCCCCCH-HHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 45566666666666664 211 11124566677777777766 221 122222 2255555677777776665443
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3e-22 Score=236.92 Aligned_cols=109 Identities=19% Similarity=0.344 Sum_probs=77.4
Q ss_pred CCCCC---CCccE-EeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCccccccccccccccccc
Q 002189 50 DPCGD---NWEGI-GCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSF 125 (955)
Q Consensus 50 ~~C~~---~w~gv-~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l 125 (955)
++|.. .|.|+ .|...+++.|+|++|+|++ +|..+ +++|++|+|++|+ ++ .+| ..+++|++|+|++|+|
T Consensus 41 ~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~-l~-~ip---~~l~~L~~L~Ls~N~l 112 (571)
T 3cvr_A 41 LPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNA-LI-SLP---ELPASLEYLDACDNRL 112 (571)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSC-CS-CCC---CCCTTCCEEECCSSCC
T ss_pred CccccccchhhhccccccCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCC-Cc-ccc---cccCCCCEEEccCCCC
Confidence 45643 59998 7887889999999999987 66655 3788888888886 55 556 3466777777777777
Q ss_pred CCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 126 SGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 126 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|+
T Consensus 113 ~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~ 153 (571)
T 3cvr_A 113 ST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT 153 (571)
T ss_dssp SC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred CC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC
Confidence 74 565 554 67777777777775 554 4566666666666665
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=1.5e-21 Score=214.89 Aligned_cols=221 Identities=23% Similarity=0.372 Sum_probs=175.7
Q ss_pred cccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh
Q 002189 111 NLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML 190 (955)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L 190 (955)
.+.++..+.+..+.++..+. +..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+
T Consensus 17 ~l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--------~~~l 84 (308)
T 1h6u_A 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--------LKNL 84 (308)
T ss_dssp HHHHHHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--------GTTC
T ss_pred HHHHHHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--------HccC
Confidence 45556666777777774333 5678899999999999984 55 68888999999999998872211 3333
Q ss_pred hccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEE
Q 002189 191 VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLY 270 (955)
Q Consensus 191 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 270 (955)
+ +|++|+|++|++++. ..+..+++|+.|+|++|.+++ ++. +..+++|+.|+
T Consensus 85 ~-------------------------~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 85 T-------------------------KITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp C-------------------------SCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred C-------------------------CCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 3 455555555555432 368889999999999999995 443 99999999999
Q ss_pred ccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCccee
Q 002189 271 LSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 271 Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
|++|.+++.++ +..+++|++|+|++|.+++ ++. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 136 l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 136 LDLNQITNISP-LAGLTNLQYLSIGNAQVSD--LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp CCSSCCCCCGG-GGGCTTCCEEECCSSCCCC--CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCcCcc-ccCCCCccEEEccCCcCCC--Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCc
Confidence 99999998776 8889999999999999975 444 8999999999999999996544 8889999999999999998
Q ss_pred eeCCCcchhhhhhhcccCCccccccCCCC
Q 002189 351 TLDLGTSYSENLLVNLQNNRISAYTERGG 379 (955)
Q Consensus 351 ~~~~~~~~~~l~~L~L~~N~l~~~~~~~~ 379 (955)
..+ ...+.+|+.|+|++|+|++.+....
T Consensus 210 ~~~-l~~l~~L~~L~l~~N~i~~~~~~~~ 237 (308)
T 1h6u_A 210 VSP-LANTSNLFIVTLTNQTITNQPVFYN 237 (308)
T ss_dssp CGG-GTTCTTCCEEEEEEEEEECCCEECC
T ss_pred ccc-ccCCCCCCEEEccCCeeecCCeeec
Confidence 775 5668889999999999998666543
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=1e-23 Score=240.13 Aligned_cols=256 Identities=19% Similarity=0.214 Sum_probs=163.3
Q ss_pred ccCcCcCCCCcccEEecCCCCCCccC----CCCCcccccccccccccccc---cCCCCCCcc-------ccCCCCcEEEc
Q 002189 79 QLSGDITGLTELHTLDLSNNKDLRGP----LPTTIGNLKKLSNLMLVGCS---FSGPIPDSI-------GSLQELVLLSL 144 (955)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~N~~l~~~----~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~-------~~l~~L~~L~L 144 (955)
.++..+..+++|++|+|++|+ +... ++..|..+++|++|+|++|. +++.+|..+ ..+++|++|+|
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~-i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNT-IGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSE-ECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHhcCCCccEEECCCCC-CCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 345566777888888888886 6654 33346678888888888753 444455444 57788888888
Q ss_pred cCCCCcC----cCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceee
Q 002189 145 NSNGFSG----RVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIH 220 (955)
Q Consensus 145 s~N~l~~----~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~ 220 (955)
++|.|++ .+|..+.++++|++|+|++|.+++..+..+.. .+..+ ..|++++.. ++|++
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--~l~~l--------~~~~~~~~~--------~~L~~ 163 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--ALQEL--------AVNKKAKNA--------PPLRS 163 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--HHHHH--------HHHHHHHTC--------CCCCE
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--HHHHH--------hhhhhcccC--------CCCcE
Confidence 8888876 36667777888888888888776332211110 01111 111111110 34666
Q ss_pred eeccCCCcc-ccCC---cccCCCCCCcEEEcccCCCC--C---CccccccCCCCCCEEEccCCcCc----c-cCCCCCCC
Q 002189 221 VLFDSNNLT-GELP---ATLGLVKSLEVVRFDRNSLS--G---PVPSNLNNLTSVNDLYLSNNKLT----G-AMPNLTGL 286 (955)
Q Consensus 221 L~L~~N~l~-~~~p---~~l~~l~~L~~L~Ls~N~l~--~---~~p~~l~~l~~L~~L~Ls~N~l~----~-~~~~~~~l 286 (955)
|+|++|+++ +.++ ..+..+++|++|+|++|.|+ | ..+..+..+++|+.|+|++|.|+ + ++..+..+
T Consensus 164 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 164 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 666666665 3333 45667777888888888776 2 33446777778888888888774 2 23346677
Q ss_pred CCCCEEECcCCCCCCC---CCChhhc--CCCCCCEEECcCCccee----cCCcCC-CCCCCCcEEEeecCcceeeeC
Q 002189 287 SVLSYLDMSNNSFDAS---EVPSWFS--SMQSLTTLMMENTNLKG----QIPADL-FSIPHLQTVVMKTNELNGTLD 353 (955)
Q Consensus 287 ~~L~~L~Ls~N~l~~~---~~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~~ 353 (955)
++|++|+|++|.|++. .++..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..+
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 7788888888877541 1244553 37788888888888876 466666 457888888888888876543
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=1.2e-23 Score=239.72 Aligned_cols=242 Identities=19% Similarity=0.250 Sum_probs=170.9
Q ss_pred CCEeEEEecCCcCccc----cCcCcCCCCcccEEecCCCC--CCccCCCCCc-------ccccccccccccccccCC---
Q 002189 64 SRVTSITLSGMGLKGQ----LSGDITGLTELHTLDLSNNK--DLRGPLPTTI-------GNLKKLSNLMLVGCSFSG--- 127 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~----~~~~l~~l~~L~~L~Ls~N~--~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~~--- 127 (955)
.+++.|+|++|++++. ++..|..+++|++|+|++|. .+.+.+|..+ .++++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 5799999999999976 44558899999999999973 2555666555 688999999999999997
Q ss_pred -CCCCccccCCCCcEEEccCCCCcCcCCCCC----CCC---------CCcCeeecCCceee-eccCCCCCCCCchhhhhc
Q 002189 128 -PIPDSIGSLQELVLLSLNSNGFSGRVPPSI----GNL---------SNLYWLDLTDNKLE-GEIPVSDGNSPGLDMLVR 192 (955)
Q Consensus 128 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~L---------~~L~~L~L~~N~l~-g~ip~~~~~~~~l~~L~~ 192 (955)
.+|..+..+++|++|+|++|.|+...+..+ ..+ ++|++|+|++|+++ +.+|.- ...+..+++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l---~~~l~~~~~ 188 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW---AKTFQSHRL 188 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHH---HHHHHHCTT
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHH---HHHHHhCCC
Confidence 477789999999999999999975444444 334 89999999999886 222210 012333444
Q ss_pred cccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCC----CCccccccCCCCCCE
Q 002189 193 AKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLS----GPVPSNLNNLTSVND 268 (955)
Q Consensus 193 L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~----~~~p~~l~~l~~L~~ 268 (955)
|++|+|++|+++.. + +....+..+..+++|+.|+|++|.|+ +.+|..+..+++|+.
T Consensus 189 L~~L~L~~n~l~~~---g-----------------~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~ 248 (386)
T 2ca6_A 189 LHTVKMVQNGIRPE---G-----------------IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 248 (386)
T ss_dssp CCEEECCSSCCCHH---H-----------------HHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCE
T ss_pred cCEEECcCCCCCHh---H-----------------HHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCE
Confidence 45555555544300 0 00023446677778888888888875 467777788888888
Q ss_pred EEccCCcCccc-----CCCC--CCCCCCCEEECcCCCCCCC---CCChhh-cCCCCCCEEECcCCcceecC
Q 002189 269 LYLSNNKLTGA-----MPNL--TGLSVLSYLDMSNNSFDAS---EVPSWF-SSMQSLTTLMMENTNLKGQI 328 (955)
Q Consensus 269 L~Ls~N~l~~~-----~~~~--~~l~~L~~L~Ls~N~l~~~---~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 328 (955)
|+|++|.|++. +..+ ..+++|++|+|++|.++.. .+|..+ .++++|+.|+|++|++++..
T Consensus 249 L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 249 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp EECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred EECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 88888888765 1233 3478888888888888541 255555 56788888888888888655
No 344
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=7.5e-21 Score=196.72 Aligned_cols=187 Identities=21% Similarity=0.250 Sum_probs=128.5
Q ss_pred CCCCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCC
Q 002189 50 DPCGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPI 129 (955)
Q Consensus 50 ~~C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 129 (955)
+.|.|.|.+|.|+... ++ .+|..+ .++|++|+|++|+ +.+..+..|.++++|++|+|++|++++..
T Consensus 3 ~~C~C~~~~v~c~~~~----------l~-~~p~~~--~~~l~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQG----------RT-SVPTGI--PAQTTYLDLETNS-LKSLPNGVFDELTSLTQLYLGGNKLQSLP 68 (208)
T ss_dssp TTCEEETTEEECCSSC----------CS-SCCSCC--CTTCSEEECCSSC-CCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCCEECCCEEEecCCC----------cc-CCCCCC--CCCCcEEEcCCCc-cCcCChhhhcccccCcEEECCCCccCccC
Confidence 4577789999997543 33 233322 3578889999986 77777777888899999999999988666
Q ss_pred CCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCc
Q 002189 130 PDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPE 209 (955)
Q Consensus 130 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~ 209 (955)
+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+.. +..+++|++|++++|+++ .+|.
T Consensus 69 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~------~~~l~~L~~L~l~~N~l~-~~~~ 141 (208)
T 2o6s_A 69 NGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGV------FDKLTQLKDLRLYQNQLK-SVPD 141 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT------TTTCTTCCEEECCSSCCS-CCCT
T ss_pred hhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhH------hccCCcCCEEECCCCccc-eeCH
Confidence 667888899999999999998766667888899999999998888433322 233455566666666666 4555
Q ss_pred cccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCC
Q 002189 210 KLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLT 264 (955)
Q Consensus 210 ~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 264 (955)
..+..+.+|+.|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++
T Consensus 142 ~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred HHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 555555556666666665542 234555666666666666665555444
No 345
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.83 E-value=1.4e-22 Score=228.77 Aligned_cols=255 Identities=17% Similarity=0.160 Sum_probs=174.9
Q ss_pred EecCCCCCCccCCCCCcccccccccccccccccCCCCC----CccccCC-CCcEEEccCCCCcCcCCCCCCCC-----CC
Q 002189 93 LDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIP----DSIGSLQ-ELVLLSLNSNGFSGRVPPSIGNL-----SN 162 (955)
Q Consensus 93 L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~L-----~~ 162 (955)
++|++|+ +++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|+|++..+..+..+ ++
T Consensus 3 ~~ls~n~-~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHP-GSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCT-TCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccc-chHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 5667775 677766666666667777777777775544 5566666 67777777777776555555554 67
Q ss_pred cCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcc----cCC
Q 002189 163 LYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPAT----LGL 238 (955)
Q Consensus 163 L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~----l~~ 238 (955)
|++|+|++|++++..+..+.. .+..+ ..+|++|+|++|++++..+.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~--~l~~~------------------------~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 135 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVK--TLAAI------------------------PFTITVLDLGWNDFSSKSSSEFKQAFSN 135 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHH--HHHTS------------------------CTTCCEEECCSSCGGGSCHHHHHHHHTT
T ss_pred ccEEECcCCcCChHHHHHHHH--HHHhC------------------------CCCccEEECcCCcCCcHHHHHHHHHHHh
Confidence 777777777766332211100 01111 145666666666666555544 444
Q ss_pred -CCCCcEEEcccCCCCCC----ccccccCCC-CCCEEEccCCcCcccCC-----CCCCC-CCCCEEECcCCCCCCCC---
Q 002189 239 -VKSLEVVRFDRNSLSGP----VPSNLNNLT-SVNDLYLSNNKLTGAMP-----NLTGL-SVLSYLDMSNNSFDASE--- 303 (955)
Q Consensus 239 -l~~L~~L~Ls~N~l~~~----~p~~l~~l~-~L~~L~Ls~N~l~~~~~-----~~~~l-~~L~~L~Ls~N~l~~~~--- 303 (955)
.++|++|+|++|.|++. ++..+..++ +|++|+|++|+|++..+ .+..+ ++|++|+|++|.|+...
T Consensus 136 ~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~ 215 (362)
T 3goz_A 136 LPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAE 215 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHH
T ss_pred CCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHH
Confidence 36999999999999954 344556665 99999999999998765 24445 59999999999996421
Q ss_pred CChhhcC-CCCCCEEECcCCcceecCC----cCCCCCCCCcEEEeecCcceeeeC--------CCcchhhhhhhcccCCc
Q 002189 304 VPSWFSS-MQSLTTLMMENTNLKGQIP----ADLFSIPHLQTVVMKTNELNGTLD--------LGTSYSENLLVNLQNNR 370 (955)
Q Consensus 304 ~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~~~l~~L~L~~N~ 370 (955)
++..+.. .++|+.|+|++|.+++..+ ..+..+++|+.|+|++|.+.+..+ ....+.+++.|||++|+
T Consensus 216 l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~ 295 (362)
T 3goz_A 216 LAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKE 295 (362)
T ss_dssp HHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCB
T ss_pred HHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCc
Confidence 3445555 4699999999999996544 456788999999999999554332 23346667899999999
Q ss_pred cccc
Q 002189 371 ISAY 374 (955)
Q Consensus 371 l~~~ 374 (955)
|...
T Consensus 296 l~~~ 299 (362)
T 3goz_A 296 IHPS 299 (362)
T ss_dssp CCGG
T ss_pred CCCc
Confidence 8765
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.83 E-value=6e-22 Score=220.86 Aligned_cols=251 Identities=16% Similarity=0.173 Sum_probs=188.3
Q ss_pred cccEEecCCCCCCccCCCCCcccc--cccccccccccccCCCCCCccccCCCCcEEEccCCCCcCc-CCCCCCCCCCcCe
Q 002189 89 ELHTLDLSNNKDLRGPLPTTIGNL--KKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGR-VPPSIGNLSNLYW 165 (955)
Q Consensus 89 ~L~~L~Ls~N~~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~L~~L~~ 165 (955)
.++.|+|++|+ +. +..+..+ ++|+.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++
T Consensus 48 ~~~~l~l~~~~-~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKN-LH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCB-CC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeecccccc-CC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 47788888886 44 4566777 7888888888888866555 55788888888888888755 6667778888888
Q ss_pred eecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCC-Cccc-cCCcccCCCCCCc
Q 002189 166 LDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSN-NLTG-ELPATLGLVKSLE 243 (955)
Q Consensus 166 L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N-~l~~-~~p~~l~~l~~L~ 243 (955)
|+|++|++++..|..++ ..++|++|+|++| .+++ .++..+..+++|+
T Consensus 123 L~L~~~~l~~~~~~~l~-------------------------------~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLA-------------------------------KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp EECTTCBCCHHHHHHHT-------------------------------TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred EeCcCcccCHHHHHHHh-------------------------------cCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 88888877644433221 1345666666666 4554 3566788899999
Q ss_pred EEEcccC-CCCCC-ccccccCCC-CCCEEEccCCc--Cc--ccCCCCCCCCCCCEEECcCCC-CCCCCCChhhcCCCCCC
Q 002189 244 VVRFDRN-SLSGP-VPSNLNNLT-SVNDLYLSNNK--LT--GAMPNLTGLSVLSYLDMSNNS-FDASEVPSWFSSMQSLT 315 (955)
Q Consensus 244 ~L~Ls~N-~l~~~-~p~~l~~l~-~L~~L~Ls~N~--l~--~~~~~~~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l~~L~ 315 (955)
+|++++| .+++. ++..+..++ +|++|+|++|. ++ +.+..+..+++|++|+|++|. ++. ..+..+..+++|+
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~-~~~~~l~~l~~L~ 250 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKN-DCFQEFFQLNYLQ 250 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCG-GGGGGGGGCTTCC
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCH-HHHHHHhCCCCCC
Confidence 9999999 99854 688889999 99999999994 54 333356679999999999999 654 5677899999999
Q ss_pred EEECcCCc-ceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-h-hhhhhhcccCCccccccCCCCC
Q 002189 316 TLMMENTN-LKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-Y-SENLLVNLQNNRISAYTERGGA 380 (955)
Q Consensus 316 ~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~-~~l~~L~L~~N~l~~~~~~~~~ 380 (955)
.|+|++|. +.......+.++++|+.|+|++| ++ +..+. + ..+..|++++|+++++.+..+.
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 99999995 44333346788999999999999 32 22322 3 2467899999999998887653
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=2.8e-20 Score=208.73 Aligned_cols=200 Identities=12% Similarity=0.090 Sum_probs=95.5
Q ss_pred ccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccc-
Q 002189 116 SNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAK- 194 (955)
Q Consensus 116 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~- 194 (955)
++++.++++++ .+|..+ .++|++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|... +..++++.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~-----f~~L~~l~~ 83 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADV-----FSNLPKLHE 83 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTS-----BCSCTTCCE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhH-----hhcchhhhh
Confidence 45667777777 566555 2467777777777774444567777777777777777654444321 11122211
Q ss_pred cccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEccc-CCCCCCccccccCCC-CCCEEEcc
Q 002189 195 HFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDR-NSLSGPVPSNLNNLT-SVNDLYLS 272 (955)
Q Consensus 195 ~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~-~L~~L~Ls 272 (955)
.+.+..|+|+ .++...|..+++|+.|++++|++.+..+..+....++..|++.+ |.+....+..|..+. .|+.|+|+
T Consensus 84 ~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~ 162 (350)
T 4ay9_X 84 IRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 162 (350)
T ss_dssp EEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECC
T ss_pred hhcccCCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccc
Confidence 1233334444 34444444444444444444444433333344444444444432 333322233333332 34444444
Q ss_pred CCcCcccCCCCCCCCCCCEEECcC-CCCCCCCCChhhcCCCCCCEEECcCCcce
Q 002189 273 NNKLTGAMPNLTGLSVLSYLDMSN-NSFDASEVPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 273 ~N~l~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
+|+|+.+++......+|+.|++++ |.++. ..+..|.++++|+.|+|++|+|+
T Consensus 163 ~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~-i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 163 KNGIQEIHNSAFNGTQLDELNLSDNNNLEE-LPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SSCCCEECTTSSTTEEEEEEECTTCTTCCC-CCTTTTTTEECCSEEECTTSCCC
T ss_pred cccccCCChhhccccchhHHhhccCCcccC-CCHHHhccCcccchhhcCCCCcC
Confidence 444444444433444444444443 23321 22233444444444444444444
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=3.3e-20 Score=219.42 Aligned_cols=123 Identities=28% Similarity=0.381 Sum_probs=73.8
Q ss_pred ceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcC
Q 002189 217 VLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSN 296 (955)
Q Consensus 217 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~ 296 (955)
+|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++++. +. ++|++|+|++
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~ 189 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVST 189 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCS
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcC
Confidence 34444444444443 333 35566666666666663 444 45566666666666666444 43 6666666666
Q ss_pred CCCCCCCCChhhcCCCCC-------CEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCc
Q 002189 297 NSFDASEVPSWFSSMQSL-------TTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGT 356 (955)
Q Consensus 297 N~l~~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 356 (955)
|+|+. +|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+
T Consensus 190 N~L~~--lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 190 NLLES--LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp SCCSS--CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred CCCCc--hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 66653 444 333 45 77777777777 567777777778888888888777655443
No 349
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.80 E-value=4.8e-22 Score=239.46 Aligned_cols=306 Identities=13% Similarity=0.062 Sum_probs=197.0
Q ss_pred CCEeEEEecCCcCccc----cCcCcCCCCcccEEecCCCCCCc----cCCCCCcccccccccccccccccCCCCCCcccc
Q 002189 64 SRVTSITLSGMGLKGQ----LSGDITGLTELHTLDLSNNKDLR----GPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGS 135 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~----~~~~l~~l~~L~~L~Ls~N~~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 135 (955)
.+++.|+|++|.+++. ++..+..+++|++|+|++|+ +. +.++..+.++++|++|+|++|.+.+ +|..+..
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~-~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTE-FAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCC-CSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccC-CCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 5788888888887655 44455667888888888886 55 2334445677888888888887763 5555666
Q ss_pred CCCCcEEEccCCCCc--------------------------CcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhh
Q 002189 136 LQELVLLSLNSNGFS--------------------------GRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDM 189 (955)
Q Consensus 136 l~~L~~L~Ls~N~l~--------------------------~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~ 189 (955)
+++|++|+++.+... +.+|..+..+++|++|+|++|.+++.... ..+..
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~-----~~~~~ 316 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHC-----TLIQK 316 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHH-----HHHTT
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHH-----HHHHh
Confidence 666666666532211 13444455566666666666665432210 11234
Q ss_pred hhccccccccCCcccccCCccccCCccceeeeecc-----------CCCccccC-CcccCCCCCCcEEEcccCCCCCCcc
Q 002189 190 LVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFD-----------SNNLTGEL-PATLGLVKSLEVVRFDRNSLSGPVP 257 (955)
Q Consensus 190 L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~-----------~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p 257 (955)
+++|++|+++ |.++......++...++|++|+++ .|.+++.. +..+..+++|++|+++.|.+++..+
T Consensus 317 ~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~ 395 (592)
T 3ogk_B 317 CPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESL 395 (592)
T ss_dssp CTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHH
T ss_pred CcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHH
Confidence 5556666666 333322222333345567778877 35665432 2234457888888888888887666
Q ss_pred ccccC-CCCCCEEEcc----CCcCcccCCC------CCCCCCCCEEECcCCC--CCCCCCChhhcCCCCCCEEECcCCcc
Q 002189 258 SNLNN-LTSVNDLYLS----NNKLTGAMPN------LTGLSVLSYLDMSNNS--FDASEVPSWFSSMQSLTTLMMENTNL 324 (955)
Q Consensus 258 ~~l~~-l~~L~~L~Ls----~N~l~~~~~~------~~~l~~L~~L~Ls~N~--l~~~~~p~~~~~l~~L~~L~Ls~N~l 324 (955)
..+.. +++|+.|+|+ .|.+++.+.. +.++++|+.|+|++|. +++.........+++|+.|+|++|++
T Consensus 396 ~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l 475 (592)
T 3ogk_B 396 ESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGE 475 (592)
T ss_dssp HHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCS
T ss_pred HHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCC
Confidence 66665 7888888886 6677764321 4558889999987543 54422222234588899999999998
Q ss_pred ee-cCCcCCCCCCCCcEEEeecCcceee-eCCC-cchhhhhhhcccCCccccccCC
Q 002189 325 KG-QIPADLFSIPHLQTVVMKTNELNGT-LDLG-TSYSENLLVNLQNNRISAYTER 377 (955)
Q Consensus 325 ~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~-~~~~~l~~L~L~~N~l~~~~~~ 377 (955)
++ .++..+..+++|++|+|++|++++. ++.. ..+++|+.|+|++|+++.....
T Consensus 476 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~ 531 (592)
T 3ogk_B 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQD 531 (592)
T ss_dssp SHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTT
T ss_pred CHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHH
Confidence 86 3455567789999999999998753 3332 2467788999999998876443
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=1.6e-19 Score=186.62 Aligned_cols=96 Identities=19% Similarity=0.271 Sum_probs=57.9
Q ss_pred CcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCC
Q 002189 233 PATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSM 311 (955)
Q Consensus 233 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l 311 (955)
+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.|++.++. +..+++|++|+|++|.+.+ .+
T Consensus 93 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--------~~ 164 (208)
T 2o6s_A 93 NGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--------TC 164 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC--------CT
T ss_pred HhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec--------CC
Confidence 33455566666666666666655555566666666666666666665553 4556666666666665533 34
Q ss_pred CCCCEEECcCCcceecCCcCCCCCC
Q 002189 312 QSLTTLMMENTNLKGQIPADLFSIP 336 (955)
Q Consensus 312 ~~L~~L~Ls~N~l~~~~p~~~~~l~ 336 (955)
++|++|+++.|+++|.+|..++.++
T Consensus 165 ~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 165 PGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred CCHHHHHHHHHhCCceeeccCcccc
Confidence 4566666666666666666555544
No 351
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.7e-21 Score=229.96 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=134.1
Q ss_pred ccccccccccccccccCCCCCCccccCCCCcEEEccCCC-------------CcCcCCCCCCCCCCcCeee-cCCceeee
Q 002189 110 GNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNG-------------FSGRVPPSIGNLSNLYWLD-LTDNKLEG 175 (955)
Q Consensus 110 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~L~~L~~L~-L~~N~l~g 175 (955)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 44566667777777776 666667777777777765554 4556666677777777777 5555442
Q ss_pred ccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCC
Q 002189 176 EIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGP 255 (955)
Q Consensus 176 ~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 255 (955)
.|..+.+++|.++ .+|.. .|+.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .
T Consensus 424 ----------------~L~~l~l~~n~i~-~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~ 477 (567)
T 1dce_A 424 ----------------DLRSKFLLENSVL-KMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-A 477 (567)
T ss_dssp ----------------HHHHHHHHHHHHH-HHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-C
T ss_pred ----------------hhhhhhhhccccc-ccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-c
Confidence 3455566777776 33321 36677777777775 454 777777777777777777 6
Q ss_pred ccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcC---C
Q 002189 256 VPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPAD---L 332 (955)
Q Consensus 256 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~ 332 (955)
+|..|.++++|+.|+|++|.|++++ .+..+++|++|+|++|+|++...|..|..+++|+.|+|++|++++..|.. +
T Consensus 478 lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~ 556 (567)
T 1dce_A 478 LPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLA 556 (567)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHH
T ss_pred cchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHH
Confidence 6777777777777777777777654 66777777777777777765222667777777777777777777543322 1
Q ss_pred CCCCCCcEEEe
Q 002189 333 FSIPHLQTVVM 343 (955)
Q Consensus 333 ~~l~~L~~L~L 343 (955)
..+|+|+.|+|
T Consensus 557 ~~lp~L~~L~l 567 (567)
T 1dce_A 557 EMLPSVSSILT 567 (567)
T ss_dssp HHCTTCSEEEC
T ss_pred HHCcccCccCC
Confidence 12666666654
No 352
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=8.3e-19 Score=191.31 Aligned_cols=193 Identities=22% Similarity=0.319 Sum_probs=118.7
Q ss_pred ccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhh
Q 002189 112 LKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLV 191 (955)
Q Consensus 112 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~ 191 (955)
+.++..+.+..+.+++..+ +..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..++
T Consensus 23 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--------l~~l~ 90 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--------LANLK 90 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--------GTTCT
T ss_pred HHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--------cccCC
Confidence 3344445555555543222 3455666666666666653 22 35556666666666666552111 22233
Q ss_pred ccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEc
Q 002189 192 RAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYL 271 (955)
Q Consensus 192 ~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 271 (955)
+|++|++++|+++ + + ..+..+++|++|+|++|++++. ..+..+++|+.|+|
T Consensus 91 ~L~~L~l~~n~l~-------------------------~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 91 NLGWLFLDENKVK-------------------------D-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TCCEEECCSSCCC-------------------------C-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCEEECCCCcCC-------------------------C-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 3333333333333 2 1 1256677777777777777742 45677777788888
Q ss_pred cCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceee
Q 002189 272 SNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGT 351 (955)
Q Consensus 272 s~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 351 (955)
++|.+++. +.+..+++|+.|+|++|++++ .+. +..+++|+.|+|++|.+++ ++ .+..+++|+.|+|++|+++..
T Consensus 142 ~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~--~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 142 GNNKITDI-TVLSRLTKLDTLSLEDNQISD--IVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCC-GGGGGCTTCSEEECCSSCCCC--CGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcCCcc-hhhccCCCCCEEEccCCcccc--chh-hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 88877766 556777788888888888765 333 7778888888888888874 33 377888888888888888763
No 353
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.77 E-value=5.3e-22 Score=239.12 Aligned_cols=306 Identities=11% Similarity=0.022 Sum_probs=175.7
Q ss_pred CEeEEEecCCc-Ccc-ccCcCcCCCCcccEEecCCCCCCccC----CCCCcccccccccccccccccCC----CCCCccc
Q 002189 65 RVTSITLSGMG-LKG-QLSGDITGLTELHTLDLSNNKDLRGP----LPTTIGNLKKLSNLMLVGCSFSG----PIPDSIG 134 (955)
Q Consensus 65 ~v~~L~L~~~~-l~~-~~~~~l~~l~~L~~L~Ls~N~~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~ 134 (955)
+++.|+|++|. ++. .++..+..+++|++|+|++|. +.+. ++..+.++++|++|+|++|.+++ .++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~-~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESS-FSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCE-EECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECcccc-ccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 49999999886 221 122334578999999999996 6655 33345678999999999999983 3444567
Q ss_pred cCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceee---eccCCCCCCCCc-----------------hhhhhccc
Q 002189 135 SLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE---GEIPVSDGNSPG-----------------LDMLVRAK 194 (955)
Q Consensus 135 ~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~---g~ip~~~~~~~~-----------------l~~L~~L~ 194 (955)
++++|++|+|++|.+.+ +|..+.++++|+.|+++.+... +..+..+..++. +..+++|+
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIR 296 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCc
Confidence 89999999999999995 6778889999999999864322 111111221111 12334555
Q ss_pred cccccCCcccccCCccccCCccceeeeeccCCCcc-ccCCcccCCCCCCcEEEcc-----------cCCCCCC-cccccc
Q 002189 195 HFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLT-GELPATLGLVKSLEVVRFD-----------RNSLSGP-VPSNLN 261 (955)
Q Consensus 195 ~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls-----------~N~l~~~-~p~~l~ 261 (955)
+|+|++|.+++.....++...++|+.|+++ |.+. +.++..+..+++|++|+|+ .|.+++. ++..+.
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~ 375 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHh
Confidence 555555554433332333444555555555 2222 2223333445556666665 2444422 122233
Q ss_pred CCCCCCEEEccCCcCcccCC-CCCC-CCCCCEEECc----CCCCCCC----CCChhhcCCCCCCEEECcCCc--ceecCC
Q 002189 262 NLTSVNDLYLSNNKLTGAMP-NLTG-LSVLSYLDMS----NNSFDAS----EVPSWFSSMQSLTTLMMENTN--LKGQIP 329 (955)
Q Consensus 262 ~l~~L~~L~Ls~N~l~~~~~-~~~~-l~~L~~L~Ls----~N~l~~~----~~p~~~~~l~~L~~L~Ls~N~--l~~~~p 329 (955)
.+++|++|+++.|.+++... .+.. +++|+.|+|+ .|.+++. .++..+.++++|+.|+|++|. +++..+
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~ 455 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGL 455 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHH
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHH
Confidence 45666666666566554332 2222 5566666664 4555431 122234556666666665432 444333
Q ss_pred cCCCC-CCCCcEEEeecCccee-eeCCC-cchhhhhhhcccCCcccc
Q 002189 330 ADLFS-IPHLQTVVMKTNELNG-TLDLG-TSYSENLLVNLQNNRISA 373 (955)
Q Consensus 330 ~~~~~-l~~L~~L~Ls~N~l~~-~~~~~-~~~~~l~~L~L~~N~l~~ 373 (955)
..+.. +++|+.|+|++|++++ .++.. ..+.+|+.|+|++|+|+.
T Consensus 456 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 456 SYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 33332 5667777777776655 22222 234556667777776653
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=2e-18 Score=181.41 Aligned_cols=114 Identities=22% Similarity=0.271 Sum_probs=76.7
Q ss_pred CCCCCCCCCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccc
Q 002189 45 NWKNNDPCGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCS 124 (955)
Q Consensus 45 ~w~~~~~C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~ 124 (955)
.|.+...| +|.+|.|+..+ ++ .+|..+. ++|++|+|++|+ +.+..|..|.++++|++|+|++|+
T Consensus 12 ~~~~~~~C--s~~~v~c~~~~----------l~-~ip~~~~--~~L~~L~Ls~n~-i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 12 ACPSQCSC--SGTTVDCRSKR----------HA-SVPAGIP--TNAQILYLHDNQ-ITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCTTCEE--ETTEEECTTSC----------CS-SCCSCCC--TTCSEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCCCCEE--eCCEeEccCCC----------cC-ccCCCCC--CCCCEEEcCCCc-cCccCHHHhhCccCCcEEECCCCC
Confidence 34444445 79999997544 33 3343332 678888888886 777777777777777777777777
Q ss_pred cCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 125 FSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc
Confidence 76555555677777777777777777555555666677776666666665
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=3e-19 Score=213.62 Aligned_cols=191 Identities=24% Similarity=0.382 Sum_probs=109.8
Q ss_pred CcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeee
Q 002189 88 TELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLD 167 (955)
Q Consensus 88 ~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 167 (955)
..+..++|..+. +.... .+..|.+|+.|+|++|.+. .+| .|..|++|+.|+|++|+|++..+ +..+++|+.|+
T Consensus 21 ~~l~~l~l~~~~-i~~~~--~~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 21 AETIKDNLKKKS-VTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHTTCSC-TTSEE--CHHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHhccCCC-ccccc--chhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 344455565554 44332 2456667777777777766 334 36667777777777777765443 66677777777
Q ss_pred cCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEc
Q 002189 168 LTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRF 247 (955)
Q Consensus 168 L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 247 (955)
|++|+|++ + +.+..+.+|+.|+|++|+|+ + + ..+..+++|+.|+|
T Consensus 94 Ls~N~l~~-l-------~~l~~l~~L~~L~Ls~N~l~-------------------------~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 94 LDENKIKD-L-------SSLKDLKKLKSLSLEHNGIS-------------------------D-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp CCSSCCCC-C-------TTSTTCTTCCEEECTTSCCC-------------------------C-C-GGGGGCTTCSEEEC
T ss_pred CcCCCCCC-C-------hhhccCCCCCEEEecCCCCC-------------------------C-C-ccccCCCccCEEEC
Confidence 77776652 1 12333444445555555444 2 1 23445556666666
Q ss_pred ccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCccee
Q 002189 248 DRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKG 326 (955)
Q Consensus 248 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 326 (955)
++|.|++. ..+..+++|+.|+|++|.|++.++ +..+++|+.|+|++|.|++ + ..+..+++|+.|+|++|++.+
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~--l-~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD--L-RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB--C-GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC--C-hHHccCCCCCEEEccCCcCcC
Confidence 66666533 455566666666666666665555 5556666666666666643 2 245666666666666666664
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.4e-18 Score=179.49 Aligned_cols=155 Identities=20% Similarity=0.279 Sum_probs=136.2
Q ss_pred ccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccC
Q 002189 194 KHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSN 273 (955)
Q Consensus 194 ~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 273 (955)
+.+++++|.++ .+|..+. ..|+.|+|++|+|++..+..|..+++|+.|+|++|.|++..|..|.++++|+.|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 34566666666 7777654 5688899999999988888999999999999999999988899999999999999999
Q ss_pred CcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeee
Q 002189 274 NKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTL 352 (955)
Q Consensus 274 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 352 (955)
|.|+.+++. |.++++|++|+|++|+|++ ..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCE-eCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 999988885 6789999999999999986 66888999999999999999999888888999999999999999998754
Q ss_pred C
Q 002189 353 D 353 (955)
Q Consensus 353 ~ 353 (955)
.
T Consensus 169 ~ 169 (220)
T 2v9t_B 169 H 169 (220)
T ss_dssp G
T ss_pred c
Confidence 3
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=7.1e-19 Score=210.31 Aligned_cols=198 Identities=21% Similarity=0.296 Sum_probs=160.5
Q ss_pred cccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh
Q 002189 111 NLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML 190 (955)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L 190 (955)
.+..+..+.|..+.+...++ +..|++|+.|+|++|.|.. ++ .+..+++|+.|+|++|+|++..| +..+
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--------l~~l 86 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--------LTNL 86 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--------GGGC
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--------hccC
Confidence 46677788888888885443 5788899999999999984 44 58889999999999998874322 4455
Q ss_pred hccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEE
Q 002189 191 VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLY 270 (955)
Q Consensus 191 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 270 (955)
.+|+.|+|++|+|+ + +| .+..+++|+.|+|++|.|++ + ..+..+++|+.|+
T Consensus 87 ~~L~~L~Ls~N~l~-------------------------~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 87 KNLGWLFLDENKIK-------------------------D-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECCSSCCC-------------------------C-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCEEECcCCCCC-------------------------C-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 55556666655554 2 22 57889999999999999995 3 4689999999999
Q ss_pred ccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCccee
Q 002189 271 LSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 271 Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
|++|.|+++ +.+..+++|+.|+|++|.|++ .+. +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 138 Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~--~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 138 LGNNKITDI-TVLSRLTKLDTLSLEDNQISD--IVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCSSCCCCC-GGGGSCTTCSEEECCSSCCCC--CGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCCccCCc-hhhcccCCCCEEECcCCcCCC--chh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 999999987 678899999999999999976 333 99999999999999999964 468999999999999999988
Q ss_pred eeCCC
Q 002189 351 TLDLG 355 (955)
Q Consensus 351 ~~~~~ 355 (955)
.+...
T Consensus 212 ~p~~~ 216 (605)
T 1m9s_A 212 KPINH 216 (605)
T ss_dssp CCCCC
T ss_pred Ccccc
Confidence 65433
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=5e-19 Score=193.03 Aligned_cols=197 Identities=18% Similarity=0.289 Sum_probs=151.4
Q ss_pred CCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCcc
Q 002189 137 QELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDM 216 (955)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~ 216 (955)
.++..+.+..+.+++.. .+..+++|+.|++++|.++ .+ +.+.. ++
T Consensus 24 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~-------~~~~~-------------------------l~ 68 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SV-------QGIQY-------------------------LP 68 (291)
T ss_dssp HHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCC-CC-------TTGGG-------------------------CT
T ss_pred HHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcc-cC-------hhHhc-------------------------CC
Confidence 34445556666665432 2445666666776666665 11 12333 34
Q ss_pred ceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcC
Q 002189 217 VLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSN 296 (955)
Q Consensus 217 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~ 296 (955)
+|+.|+|++|++++..+ +..+++|+.|+|++|.+++ ++ .+..+++|+.|+|++|++++. +.+..+++|++|+|++
T Consensus 69 ~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~ 143 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGN 143 (291)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCS
T ss_pred CCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccC
Confidence 55556666666654433 8899999999999999995 44 499999999999999999986 5688899999999999
Q ss_pred CCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccccC
Q 002189 297 NSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTE 376 (955)
Q Consensus 297 N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~ 376 (955)
|++++ + ..+..+++|+.|+|++|++++..+ +..+++|+.|+|++|+|++. +....+.+|+.|+|++|+++..+.
T Consensus 144 n~l~~--~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~~~~~ 217 (291)
T 1h6t_A 144 NKITD--I-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPI 217 (291)
T ss_dssp SCCCC--C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEECCCE
T ss_pred CcCCc--c-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcccCCcc
Confidence 99976 3 679999999999999999997655 89999999999999999985 446678889999999999998665
Q ss_pred CCC
Q 002189 377 RGG 379 (955)
Q Consensus 377 ~~~ 379 (955)
...
T Consensus 218 ~~~ 220 (291)
T 1h6t_A 218 NHQ 220 (291)
T ss_dssp ECC
T ss_pred ccc
Confidence 544
No 359
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=7.5e-20 Score=224.24 Aligned_cols=126 Identities=17% Similarity=0.092 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhcCC---CCCCCCCCC-CCCCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCC
Q 002189 25 DNDFVILKALKDDIWE---NEPPNWKNN-DPCGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKD 100 (955)
Q Consensus 25 ~~~~~~L~~~k~~~~~---~~~~~w~~~-~~C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~ 100 (955)
+.+..+|.++..+... .....|... .++. .|.+++++..+++.|+|.++++... + ...|+.++|+.|.
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~l~L~~n~~~~~-~-----~~~l~~l~Ls~~~- 202 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG-TATNSAVSTPLTPKIELFANGKDEA-N-----QALLQHKKLSQYS- 202 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccc-cCCCceecCCccceEEeeCCCCCcc-h-----hhHhhcCccCccc-
Confidence 4567778777755421 122456433 4443 6999999999999999999998853 2 2335556666664
Q ss_pred CccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 101 LRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 101 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
+ ..++++.|.+. ..|..|..+++|+.|+|++|.|. .+|..+.++++|++|+|++|+|+
T Consensus 203 i--------------~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~ 260 (727)
T 4b8c_D 203 I--------------DEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT 260 (727)
T ss_dssp ----------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS
T ss_pred c--------------cCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc
Confidence 2 23345556665 56667777777777777777777 56666667777777777776665
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=2.9e-18 Score=178.87 Aligned_cols=155 Identities=18% Similarity=0.284 Sum_probs=125.6
Q ss_pred cccccCCcccccCCccccCCccceeeeeccCCCccccCC-cccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccC
Q 002189 195 HFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELP-ATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSN 273 (955)
Q Consensus 195 ~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 273 (955)
.+++++|.++ .+|..+.. .++.|+|++|+|++..+ ..|..+++|+.|+|++|.|++..+..|.++++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~~~~---~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIPQ---YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSCCCT---TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccCCCC---CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4555555555 56655432 35677788888877654 4578888888889988888877777888888999999999
Q ss_pred CcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeee
Q 002189 274 NKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTL 352 (955)
Q Consensus 274 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 352 (955)
|.|++.++. +.++++|++|+|++|+|++ ..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++.+..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCC-BCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCe-ECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 998888774 7788899999999999876 56788899999999999999999888999999999999999999999866
Q ss_pred CC
Q 002189 353 DL 354 (955)
Q Consensus 353 ~~ 354 (955)
+.
T Consensus 170 ~l 171 (220)
T 2v70_A 170 YL 171 (220)
T ss_dssp GG
T ss_pred ch
Confidence 53
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=4e-18 Score=182.97 Aligned_cols=172 Identities=17% Similarity=0.239 Sum_probs=109.6
Q ss_pred cccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh
Q 002189 111 NLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML 190 (955)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L 190 (955)
++.++..+++++|.+++ ++ .+..+++|++|++++|+|+ .++ .+..+++|++|+|++|+|++.
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-------------- 78 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-------------- 78 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC--------------
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC--------------
Confidence 56667777777777773 33 4677777777777777777 344 566777777777777766511
Q ss_pred hccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEE
Q 002189 191 VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLY 270 (955)
Q Consensus 191 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 270 (955)
+. +..+++|+.|+|++|++++ +|.... ++|+.|+
T Consensus 79 ------------------------------------------~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~ 112 (263)
T 1xeu_A 79 ------------------------------------------SP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLF 112 (263)
T ss_dssp ------------------------------------------GG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEE
T ss_pred ------------------------------------------hh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEE
Confidence 11 3334445555555555542 222111 5566666
Q ss_pred ccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCccee
Q 002189 271 LSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 271 Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
|++|.|++. +.+..+++|+.|+|++|+|++ ++ .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++
T Consensus 113 L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~--~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 113 LDNNELRDT-DSLIHLKNLEILSIRNNKLKS--IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CCSSCCSBS-GGGTTCTTCCEEECTTSCCCB--CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred ccCCccCCC-hhhcCcccccEEECCCCcCCC--Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 666666554 345666677777777777654 23 567777788888888887755 667788888888888888876
Q ss_pred ee
Q 002189 351 TL 352 (955)
Q Consensus 351 ~~ 352 (955)
.+
T Consensus 187 ~~ 188 (263)
T 1xeu_A 187 EP 188 (263)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=1.6e-20 Score=223.34 Aligned_cols=193 Identities=19% Similarity=0.191 Sum_probs=158.0
Q ss_pred ccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCce-------------eeeccCCCCCCCCchhhhhcccccc-cc
Q 002189 134 GSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNK-------------LEGEIPVSDGNSPGLDMLVRAKHFH-FG 199 (955)
Q Consensus 134 ~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~-------------l~g~ip~~~~~~~~l~~L~~L~~L~-L~ 199 (955)
..+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|. .+..|.+|+.|+ ++
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~------~l~~l~~L~~L~~l~ 418 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKE------TLQYFSTLKAVDPMR 418 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHH------HHHHHHHHHHHCGGG
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHH------HHHHHHhcccCcchh
Confidence 57889999999999998 789999999999999998876 3333332 345667777777 67
Q ss_pred CCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCccc
Q 002189 200 KNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGA 279 (955)
Q Consensus 200 ~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 279 (955)
.|.+. .|..+.+++|.++...+ ..|+.|+|++|.|++ +|. |..+++|+.|+|++|.|+.+
T Consensus 419 ~n~~~------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~l 478 (567)
T 1dce_A 419 AAYLD------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRAL 478 (567)
T ss_dssp HHHHH------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCC
T ss_pred hcccc------------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccccc
Confidence 66654 46667777777775332 248899999999995 676 99999999999999999977
Q ss_pred CCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecC-CcCCCCCCCCcEEEeecCcceeeeCCCc
Q 002189 280 MPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQI-PADLFSIPHLQTVVMKTNELNGTLDLGT 356 (955)
Q Consensus 280 ~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 356 (955)
|..+..+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.++...
T Consensus 479 p~~~~~l~~L~~L~Ls~N~l~~--lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 553 (567)
T 1dce_A 479 PPALAALRCLEVLQASDNALEN--VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQE 553 (567)
T ss_dssp CGGGGGCTTCCEEECCSSCCCC--CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTT
T ss_pred chhhhcCCCCCEEECCCCCCCC--Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHH
Confidence 7788999999999999999976 56 7899999999999999999876 8999999999999999999998877553
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=4.4e-18 Score=191.67 Aligned_cols=65 Identities=25% Similarity=0.376 Sum_probs=31.8
Q ss_pred cCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCC----CCCCCCCEEECcCCCCC
Q 002189 236 LGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNL----TGLSVLSYLDMSNNSFD 300 (955)
Q Consensus 236 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~----~~l~~L~~L~Ls~N~l~ 300 (955)
|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++++.+ ..+++|+.|+|++|+|+
T Consensus 108 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 108 FSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred hCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 344455555555555555444555555555555555555555444332 23445555555555544
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.4e-17 Score=174.96 Aligned_cols=155 Identities=19% Similarity=0.194 Sum_probs=136.3
Q ss_pred ccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccC
Q 002189 194 KHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSN 273 (955)
Q Consensus 194 ~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 273 (955)
+.+++++++++ .+|..+. .+|+.|+|++|+|++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++
T Consensus 22 ~~v~c~~~~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEeEccCCCcC-ccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 45666677776 7777654 6788999999999998899999999999999999999866667789999999999999
Q ss_pred CcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeee
Q 002189 274 NKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTL 352 (955)
Q Consensus 274 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 352 (955)
|+|+++++. +..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 999998885 688999999999999997 47888999999999999999999777778999999999999999998866
Q ss_pred CC
Q 002189 353 DL 354 (955)
Q Consensus 353 ~~ 354 (955)
+.
T Consensus 176 ~~ 177 (229)
T 3e6j_A 176 RD 177 (229)
T ss_dssp GG
T ss_pred ch
Confidence 53
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=5.3e-18 Score=190.95 Aligned_cols=107 Identities=21% Similarity=0.136 Sum_probs=82.2
Q ss_pred EEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcc-cccccccccccccccCCCCCCccccCCCCcEEEccC
Q 002189 68 SITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIG-NLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNS 146 (955)
Q Consensus 68 ~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 146 (955)
.+++++++|+. +|..+. ..++.|+|++|+ +++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~-l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNN-LSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSC-CCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCC-CCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777888874 565443 458889999986 7777777777 888888888888888876677788888888888888
Q ss_pred CCCcCcCCCCCCCCCCcCeeecCCceeeeccC
Q 002189 147 NGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIP 178 (955)
Q Consensus 147 N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip 178 (955)
|+|++..+..|.++++|++|+|++|+|++..|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 129 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDR 129 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECH
Confidence 88886666678888888888888888774433
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1e-17 Score=174.71 Aligned_cols=101 Identities=24% Similarity=0.324 Sum_probs=49.3
Q ss_pred EEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCC
Q 002189 69 ITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNG 148 (955)
Q Consensus 69 L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 148 (955)
+++++++++ .+|..+. ++|++|+|++|+ +.+..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~-i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNT-IKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSC-CCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCc-CCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 344455555 3444332 456666666664 555444455555555555555555554444444444445555444444
Q ss_pred CcCcCCCCCCCCCCcCeeecCCcee
Q 002189 149 FSGRVPPSIGNLSNLYWLDLTDNKL 173 (955)
Q Consensus 149 l~~~~p~~~~~L~~L~~L~L~~N~l 173 (955)
|+...+..|.++++|++|+|++|+|
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l 116 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKI 116 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCHhHccCCCCCCEEECCCCCC
Confidence 4433333334444444444444443
No 367
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.74 E-value=8.7e-22 Score=237.29 Aligned_cols=327 Identities=11% Similarity=0.082 Sum_probs=200.5
Q ss_pred CCEeEEEecCCcCccccCcCcC-CCCcccEEecCCCCCCccC-CCCCcccccccccccccccccCCCCCCccc----cCC
Q 002189 64 SRVTSITLSGMGLKGQLSGDIT-GLTELHTLDLSNNKDLRGP-LPTTIGNLKKLSNLMLVGCSFSGPIPDSIG----SLQ 137 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~-~l~~L~~L~Ls~N~~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~ 137 (955)
.+++.|+|+++.+++..+..+. .+++|++|+|++|..+... ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 5888999999998877766665 6889999999988424332 344455788999999999988765544443 566
Q ss_pred CCcEEEccCCC--CcCc-CCCCCCCCCCcCeeecCCc-eeeeccCCCC------------------------------CC
Q 002189 138 ELVLLSLNSNG--FSGR-VPPSIGNLSNLYWLDLTDN-KLEGEIPVSD------------------------------GN 183 (955)
Q Consensus 138 ~L~~L~Ls~N~--l~~~-~p~~~~~L~~L~~L~L~~N-~l~g~ip~~~------------------------------~~ 183 (955)
+|++|+|++|. ++.. ++..+.++++|++|+|++| .+.+ +|..+ .+
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 89999998887 2211 1112244688888888877 2221 11110 00
Q ss_pred CCc--------------h----hhhhccccccccCCcccccCCccccCCccceeeeeccCCCcccc-CCcccCCCCCCcE
Q 002189 184 SPG--------------L----DMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGE-LPATLGLVKSLEV 244 (955)
Q Consensus 184 ~~~--------------l----~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~ 244 (955)
++. + ..+++|++|+|++|.+++.....+....++|+.|++++| ++.. ++.....+++|+.
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 110 1 134667777777777664433444445566777777766 3322 2222334677777
Q ss_pred EEcc---------cCCCCCCcccccc-CCCCCCEEEccCCcCcccCC-CCC-CCCCCCEEECc--C----CCCCCCC---
Q 002189 245 VRFD---------RNSLSGPVPSNLN-NLTSVNDLYLSNNKLTGAMP-NLT-GLSVLSYLDMS--N----NSFDASE--- 303 (955)
Q Consensus 245 L~Ls---------~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~-~~~-~l~~L~~L~Ls--~----N~l~~~~--- 303 (955)
|+++ .|.+++.....+. .+++|+.|+++.|.+++... .+. .+++|+.|+|+ + |.++...
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 7773 3445433222232 36777777777777765433 232 46788888888 4 5554211
Q ss_pred -CChhhcCCCCCCEEECcCCcceecCCcCCCC-CCCCcEEEeecCcceeeeCCC--cchhhhhhhcccCCccccccCC-C
Q 002189 304 -VPSWFSSMQSLTTLMMENTNLKGQIPADLFS-IPHLQTVVMKTNELNGTLDLG--TSYSENLLVNLQNNRISAYTER-G 378 (955)
Q Consensus 304 -~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~~~~--~~~~~l~~L~L~~N~l~~~~~~-~ 378 (955)
++..+.++++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..... ..+++|+.|+|++|+++..... .
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~ 501 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLAN 501 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHT
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHH
Confidence 122356778888888877 666555555554 788889999888886643322 2366788889998888654433 2
Q ss_pred CCCCcceeEecCcch
Q 002189 379 GAPAVNLTLIDNPIC 393 (955)
Q Consensus 379 ~~~~~~L~~l~n~~c 393 (955)
...+.+|+.++...|
T Consensus 502 ~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 502 ASKLETMRSLWMSSC 516 (594)
T ss_dssp GGGGGGSSEEEEESS
T ss_pred HHhCCCCCEEeeeCC
Confidence 233455665555444
No 368
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=2.9e-18 Score=183.53 Aligned_cols=136 Identities=16% Similarity=0.178 Sum_probs=104.7
Q ss_pred CCccCeeeccCceEEEEEEe-CCCcE--EEEEEcccCCcc------------------------hhHHHHHHHHHHHhcc
Q 002189 630 FSDANDVGSGGYGKVYKGTL-PNGQL--IAIKRAQQGSMQ------------------------GGQEFKMEIELLSRVH 682 (955)
Q Consensus 630 f~~~~~lG~G~fg~Vy~~~~-~~g~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 682 (955)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999997 68889 999987543111 0135788999999999
Q ss_pred CCCc--ceEEEEEEeCCeEEEEEEecC-CC----CcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhh-hccCCCeeccC
Q 002189 683 HKNL--VSLLGFCFDRGEQMLIYEFVP-NG----SLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLH-ELANPPIIHRD 754 (955)
Q Consensus 683 H~ni--v~l~~~~~~~~~~~lV~e~~~-~g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrD 754 (955)
|+++ ..++++ +..+|||||+. +| +|.++... .++.....++.|++.||.||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8864 344432 35689999995 25 44433221 224456789999999999999 888 99999
Q ss_pred CCCccEEEcCCCceEEeeccccccc
Q 002189 755 IKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 755 lk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 8999999999764
No 369
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.72 E-value=2.4e-17 Score=171.85 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=51.8
Q ss_pred EEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCC-CCcccccccccccccccccCCCCCCccccCCCCcEEEccC
Q 002189 68 SITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLP-TTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNS 146 (955)
Q Consensus 68 ~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 146 (955)
.|++++++++. +|..+. ..+++|+|++|+ +.+..| ..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~-l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNE-FTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSC-CCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCc-CCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 55666677663 454432 234666666665 555433 2345555555555555555544444455555555555555
Q ss_pred CCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 147 NGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 147 N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
|+|++..+..|.++++|++|+|++|+|+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 118 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRIT 118 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCC
Confidence 5554444444444444444444444443
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=9e-18 Score=180.21 Aligned_cols=82 Identities=20% Similarity=0.270 Sum_probs=69.9
Q ss_pred CCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCe
Q 002189 86 GLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYW 165 (955)
Q Consensus 86 ~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~ 165 (955)
.+.++..++|++|. +.+. + .+..+++|++|++++|+++ .+| .+..+++|++|+|++|+|++..+ +.++++|++
T Consensus 17 ~l~~l~~l~l~~~~-i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQS-VTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSC-TTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCC-cccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 46778888999986 6544 3 6889999999999999998 566 68999999999999999996554 999999999
Q ss_pred eecCCceee
Q 002189 166 LDLTDNKLE 174 (955)
Q Consensus 166 L~L~~N~l~ 174 (955)
|+|++|+++
T Consensus 90 L~L~~N~l~ 98 (263)
T 1xeu_A 90 LSVNRNRLK 98 (263)
T ss_dssp EECCSSCCS
T ss_pred EECCCCccC
Confidence 999999987
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=4.9e-17 Score=166.44 Aligned_cols=132 Identities=18% Similarity=0.231 Sum_probs=69.0
Q ss_pred ccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccc
Q 002189 132 SIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKL 211 (955)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~ 211 (955)
....+++|++|++++|.|+ .+| .+..+++|++|++++|.++ ..+.+..+
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--------~~~~l~~l--------------------- 87 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--------NYNPISGL--------------------- 87 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--------CCGGGTTC---------------------
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--------cchhhhcC---------------------
Confidence 3466777777777777777 455 5777777777777777554 01111112
Q ss_pred cCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCc-CcccCCCCCCCCCCC
Q 002189 212 FRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNK-LTGAMPNLTGLSVLS 290 (955)
Q Consensus 212 ~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~l~~L~ 290 (955)
++|++|++++|++++..+..++.+++|++|+|++|.+++..|..+..+++|+.|+|++|. ++.. +.+..+++|+
T Consensus 88 ----~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~ 162 (197)
T 4ezg_A 88 ----SNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELK 162 (197)
T ss_dssp ----TTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCC
T ss_pred ----CCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCC
Confidence 223333333333333344445555555555555555555455555555555555555554 3332 2344444444
Q ss_pred EEECcCCCC
Q 002189 291 YLDMSNNSF 299 (955)
Q Consensus 291 ~L~Ls~N~l 299 (955)
+|+|++|++
T Consensus 163 ~L~l~~n~i 171 (197)
T 4ezg_A 163 SLNIQFDGV 171 (197)
T ss_dssp EEECTTBCC
T ss_pred EEECCCCCC
Confidence 444444444
No 372
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.69 E-value=1.3e-19 Score=218.36 Aligned_cols=301 Identities=14% Similarity=0.081 Sum_probs=198.1
Q ss_pred CCEeEEEecCC-cCccc-cCcCcCCCCcccEEecCCCCCCccCCCCCcc----cccccccccccccc--cCC-CCCCccc
Q 002189 64 SRVTSITLSGM-GLKGQ-LSGDITGLTELHTLDLSNNKDLRGPLPTTIG----NLKKLSNLMLVGCS--FSG-PIPDSIG 134 (955)
Q Consensus 64 ~~v~~L~L~~~-~l~~~-~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~----~l~~L~~L~Ls~N~--l~~-~~p~~~~ 134 (955)
.+++.|+|++| .++.. ++..+..+++|++|+|++|. +++..+..+. .+++|++|+|++|. ++. .++..+.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~-i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESD-VDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCE-EECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCc-cCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHH
Confidence 47778888777 44432 33334467778888887775 5554433332 45577777777775 110 0111123
Q ss_pred cCCCCcEEEccCCC--------------------------------------------------CcC----cCCCCCCCC
Q 002189 135 SLQELVLLSLNSNG--------------------------------------------------FSG----RVPPSIGNL 160 (955)
Q Consensus 135 ~l~~L~~L~Ls~N~--------------------------------------------------l~~----~~p~~~~~L 160 (955)
.+++|++|+|++|. +.. .++..+..+
T Consensus 209 ~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~ 288 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVC 288 (594)
T ss_dssp HCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHH
T ss_pred hCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhh
Confidence 34666666666651 111 112222356
Q ss_pred CCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeec---------cCCCcccc
Q 002189 161 SNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLF---------DSNNLTGE 231 (955)
Q Consensus 161 ~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L---------~~N~l~~~ 231 (955)
++|++|+|++|.+++.... ..+..+++|+.|++++| ++......+....++|++|++ ..+.+++.
T Consensus 289 ~~L~~L~L~~~~l~~~~l~-----~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLV-----KLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp TTCCEEECTTCCCCHHHHH-----HHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred CCCCEEEccCCCCCHHHHH-----HHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 8899999999887643211 11345678899999988 542222233334677999988 44566654
Q ss_pred CCcccC-CCCCCcEEEcccCCCCCCcccccc-CCCCCCEEEcc--C----CcCcccCC------CCCCCCCCCEEECcCC
Q 002189 232 LPATLG-LVKSLEVVRFDRNSLSGPVPSNLN-NLTSVNDLYLS--N----NKLTGAMP------NLTGLSVLSYLDMSNN 297 (955)
Q Consensus 232 ~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls--~----N~l~~~~~------~~~~l~~L~~L~Ls~N 297 (955)
....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++.+. -+..+++|+.|+|++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~- 441 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG- 441 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-
Confidence 444443 489999999999999876666665 58999999999 4 66664332 145688999999987
Q ss_pred CCCCCCCChhhcC-CCCCCEEECcCCcceecCCcCC-CCCCCCcEEEeecCcceeeeCC-C-cchhhhhhhcccCCcccc
Q 002189 298 SFDASEVPSWFSS-MQSLTTLMMENTNLKGQIPADL-FSIPHLQTVVMKTNELNGTLDL-G-TSYSENLLVNLQNNRISA 373 (955)
Q Consensus 298 ~l~~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~-~-~~~~~l~~L~L~~N~l~~ 373 (955)
.++. ..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++.... . ..+.+|+.|++++|+++.
T Consensus 442 ~l~~-~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 442 LLTD-KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp SCCH-HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred cccH-HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 6654 23344444 8999999999999987655555 5689999999999999654332 3 347889999999999853
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.68 E-value=7.5e-17 Score=165.07 Aligned_cols=155 Identities=13% Similarity=0.186 Sum_probs=106.6
Q ss_pred CcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCch
Q 002189 108 TIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGL 187 (955)
Q Consensus 108 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l 187 (955)
....+++|++|++++|.++ .+| .+..+++|++|++++|.++. + ..+..+++|++|+|++|++++..|..++.
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~---- 110 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN-Y-NPISGLSNLERLRIMGKDVTSDKIPNLSG---- 110 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC-C-GGGTTCTTCCEEEEECTTCBGGGSCCCTT----
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc-c-hhhhcCCCCCEEEeECCccCcccChhhcC----
Confidence 3466777777777777777 555 57777778888888776652 2 36777777888888777777544443322
Q ss_pred hhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCC-CCCCccccccCCCCC
Q 002189 188 DMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNS-LSGPVPSNLNNLTSV 266 (955)
Q Consensus 188 ~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L 266 (955)
+ ++|+.|+|++|++++..|..+..+++|++|+|++|. ++ .+| .+..+++|
T Consensus 111 --l-------------------------~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L 161 (197)
T 4ezg_A 111 --L-------------------------TSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPEL 161 (197)
T ss_dssp --C-------------------------TTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSC
T ss_pred --C-------------------------CCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCC
Confidence 2 234444444445555566677788888888888887 55 555 68888888
Q ss_pred CEEEccCCcCcccCCCCCCCCCCCEEECcCCCCC
Q 002189 267 NDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFD 300 (955)
Q Consensus 267 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 300 (955)
+.|+|++|.+++.+ .+..+++|++|++++|+|.
T Consensus 162 ~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 162 KSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CEEECTTBCCCCCT-TGGGCSSCCEEEECBC---
T ss_pred CEEECCCCCCcChH-HhccCCCCCEEEeeCcccC
Confidence 88888888888755 6677778888888888764
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.8e-17 Score=203.02 Aligned_cols=169 Identities=21% Similarity=0.284 Sum_probs=115.5
Q ss_pred CEeEEEecCCcCcc---------ccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCcccc
Q 002189 65 RVTSITLSGMGLKG---------QLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGS 135 (955)
Q Consensus 65 ~v~~L~L~~~~l~~---------~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 135 (955)
.+..++|+++.|.+ ..+..|..++.|+.|+|++|+ +. .+|..+.++++|++|+|++|.|+ .+|..|++
T Consensus 192 ~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~-l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 268 (727)
T 4b8c_D 192 LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQ-IF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKN 268 (727)
T ss_dssp ------------------------------CCCCCCEEECTTSC-CS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGG
T ss_pred HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCC-CC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhC
Confidence 34445555555443 457789999999999999997 55 77888889999999999999999 88999999
Q ss_pred CCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCc
Q 002189 136 LQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPD 215 (955)
Q Consensus 136 l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~ 215 (955)
|++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..++. |.+|+.|+|++|+|+|.+|..++...
T Consensus 269 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~------l~~L~~L~L~~N~l~~~~p~~~~~~~ 340 (727)
T 4b8c_D 269 LSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGN------LCNLQFLGVEGNPLEKQFLKILTEKS 340 (727)
T ss_dssp GTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTS------CTTCCCEECTTSCCCSHHHHHHHHHH
T ss_pred CCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhc------CCCccEEeCCCCccCCCChHHHhhcc
Confidence 999999999999999 78999999999999999999997 77766544 56678888999988877776665443
Q ss_pred cceeeeeccCCCccccCCcccCCCCCCcEEEcccC
Q 002189 216 MVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRN 250 (955)
Q Consensus 216 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 250 (955)
..+..|+|++|.+++.+|.. |+.|+++.|
T Consensus 341 ~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 341 VTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp HHHHHHHHHHCCCCCCCCCC---------------
T ss_pred hhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 34445677777777776653 344555555
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=3.1e-16 Score=159.73 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=91.6
Q ss_pred CCcEEEcccCCCCCCccc-cccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEE
Q 002189 241 SLEVVRFDRNSLSGPVPS-NLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLM 318 (955)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 318 (955)
+|++|+|++|.|++..+. .|..+++|+.|+|++|.|++..+ .+.++++|++|+|++|+|++ ..+..|.++++|+.|+
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE-ISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCE-ECSSSSTTCTTCCEEE
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCc-cCHHHhcCCCCCCEEE
Confidence 556666666666544332 35666666666666666666644 46666666666667776654 4555677788888888
Q ss_pred CcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcchhhhhhhcccCCccccccCCCC
Q 002189 319 MENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTSYSENLLVNLQNNRISAYTERGG 379 (955)
Q Consensus 319 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~ 379 (955)
|++|+|++..|..+..+++|++|+|++|++++..+..+-...+....+..+......|...
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l 169 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKV 169 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTT
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHH
Confidence 8888888888889999999999999999999876643322334444555555554444433
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=1.9e-16 Score=161.41 Aligned_cols=133 Identities=23% Similarity=0.270 Sum_probs=111.7
Q ss_pred eEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCC-CcccccccccccccccccCCCCCCccccCCCCcEEEcc
Q 002189 67 TSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPT-TIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLN 145 (955)
Q Consensus 67 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 145 (955)
+.|++++++++ .+|..+.. +|++|+|++|+ +.+..+. .|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~-i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNE-LGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCC-CCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCc-CCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 35677777886 56665543 89999999997 7777664 48999999999999999998889999999999999999
Q ss_pred CCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCc
Q 002189 146 SNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPE 209 (955)
Q Consensus 146 ~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~ 209 (955)
+|+|++..+..|.++++|++|+|++|+|++.+|..+.. +++|++|+|++|.+++..+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEH------LNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTT------CTTCCEEECTTCCBCCSGGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhc------CCCCCEEEeCCCCccCcCcc
Confidence 99999888888999999999999999999888876544 56678889999998876554
No 377
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=1.6e-15 Score=152.33 Aligned_cols=139 Identities=23% Similarity=0.318 Sum_probs=98.2
Q ss_pred CCCCCCCccEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCC
Q 002189 50 DPCGDNWEGIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPI 129 (955)
Q Consensus 50 ~~C~~~w~gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 129 (955)
+.|.|.|.+|.|+.. +++ .+|..+ .++|++|+|++|+ +.+..+..|.++++|++|+|++|++++..
T Consensus 3 ~~C~C~~~~l~~~~~----------~l~-~~p~~~--~~~l~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK----------GLT-SVPTGI--PSSATRLELESNK-LQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68 (177)
T ss_dssp TTCEEETTEEECCSS----------CCS-SCCTTC--CTTCSEEECCSSC-CCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCCEeCCCEEEecCC----------CCc-cCCCCC--CCCCcEEEeCCCc-ccEeCHHHhcCcccccEEECCCCcceEeC
Confidence 457677888877643 343 233222 2578888888886 77666667788888888888888888666
Q ss_pred CCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCC
Q 002189 130 PDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIP 208 (955)
Q Consensus 130 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip 208 (955)
+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++ +|... +..+++|++|+|++|++++..|
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~-----~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPDGI-----FDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTT-----TTTCTTCCEEECCSSCBCCCHH
T ss_pred hhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceE-eCHHH-----hcCCcccCEEEecCCCeeccCc
Confidence 6667888888888888888886666667888888888888888873 33321 3345667778888888876554
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=6.9e-16 Score=171.32 Aligned_cols=289 Identities=13% Similarity=0.071 Sum_probs=158.1
Q ss_pred cccCcCcCC--CCcccEEecCCCCCCccCCCCCccc-ccccccccccccccC--CCCCCccccCCCCcEEEccCCCCcCc
Q 002189 78 GQLSGDITG--LTELHTLDLSNNKDLRGPLPTTIGN-LKKLSNLMLVGCSFS--GPIPDSIGSLQELVLLSLNSNGFSGR 152 (955)
Q Consensus 78 ~~~~~~l~~--l~~L~~L~Ls~N~~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~ 152 (955)
|.++..+.. +.+|++|.++++ +...--..+.. +++|+.|+|++|++. ...+. .++.+..+.+..|.|.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~--i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~-- 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK--LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP-- 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE--ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC--
T ss_pred CcHHhhccchhhCceeEEEEecc--ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC--
Confidence 344444443 667788888765 22111112223 556777777777776 22222 2222455555555332
Q ss_pred CCCCCCC--------CCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeecc
Q 002189 153 VPPSIGN--------LSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFD 224 (955)
Q Consensus 153 ~p~~~~~--------L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~ 224 (955)
+.+|.+ +++|+.|+|.+ +++ .|+. ..+..+.+|+.|++.+|.++ .|+...|.....+..+.+.
T Consensus 86 -~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-~I~~-----~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~ 156 (329)
T 3sb4_A 86 -AYAFSNVVNGVTKGKQTLEKVILSE-KIK-NIED-----AAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLG 156 (329)
T ss_dssp -TTTTEEEETTEEEECTTCCC-CBCT-TCC-EECT-----TTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTT
T ss_pred -HHHhcccccccccccCCCcEEECCc-ccc-chhH-----HHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCc
Confidence 345666 77777777777 555 2332 12344555666677777666 6666666665555555544
Q ss_pred CCC----ccccCCcccCCCCCCc-EEEcccCCCCCCccccc----cCCCCCCEEEccCCcCcccCCCCC-CCCCCCEEEC
Q 002189 225 SNN----LTGELPATLGLVKSLE-VVRFDRNSLSGPVPSNL----NNLTSVNDLYLSNNKLTGAMPNLT-GLSVLSYLDM 294 (955)
Q Consensus 225 ~N~----l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~p~~l----~~l~~L~~L~Ls~N~l~~~~~~~~-~l~~L~~L~L 294 (955)
.+. .......+|..+.+|+ .+.+.... .++..+ ....++..+.+.++-.......+. .+++|+.|+|
T Consensus 157 ~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L 233 (329)
T 3sb4_A 157 SSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDI 233 (329)
T ss_dssp CTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEEC
T ss_pred chhhhhccccccccccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEEC
Confidence 421 1112233344444444 33332211 112111 123344444444332111111111 2567777777
Q ss_pred cCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCc-EEEeecCcceeeeCCCcc-hhhhhhhcccCCccc
Q 002189 295 SNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQ-TVVMKTNELNGTLDLGTS-YSENLLVNLQNNRIS 372 (955)
Q Consensus 295 s~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~ 372 (955)
++|+++. .....|.++++|+.|+|.+| ++..-+..|.++++|+ .|+|.+ .++.+.+..|. +.+|+.++|++|.++
T Consensus 234 ~~n~i~~-I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~ 310 (329)
T 3sb4_A 234 SKTNATT-IPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT 310 (329)
T ss_dssp TTBCCCE-ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC
T ss_pred CCCCcce-ecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC
Confidence 7777754 45556777777777777776 6656666677777777 777777 66666655554 456667777778888
Q ss_pred cccCCCCCCCcceeEe
Q 002189 373 AYTERGGAPAVNLTLI 388 (955)
Q Consensus 373 ~~~~~~~~~~~~L~~l 388 (955)
.+...+|.+..+|+.+
T Consensus 311 ~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 311 TLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECTTTTCTTCCCCEE
T ss_pred ccchhhhcCCcchhhh
Confidence 8888888887777665
No 379
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=2.9e-15 Score=166.53 Aligned_cols=138 Identities=14% Similarity=0.145 Sum_probs=100.5
Q ss_pred CCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcc--------------hhHH--------HHHHHHHHHhccCCCc
Q 002189 629 NFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQ--------------GGQE--------FKMEIELLSRVHHKNL 686 (955)
Q Consensus 629 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--------------~~~~--------~~~E~~~l~~l~H~ni 686 (955)
-|.+.++||+|+||.||+|...+|+.||||+++..... .... ..+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 37888999999999999999889999999987632110 0011 2346667777755444
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCC
Q 002189 687 VSLLGFCFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERL 766 (955)
Q Consensus 687 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~ 766 (955)
.-..-+.. ...+|||||+++++|.+..... ....++.|++.+|.|||+.| ||||||||.|||+++++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~~~--------~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSSVP--------DPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK 242 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCCCS--------CHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcccH--------HHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence 21111111 1347999999998887765321 12467889999999999998 99999999999998877
Q ss_pred ----------ceEEeeccccccc
Q 002189 767 ----------NAKVADFGLSKSM 779 (955)
Q Consensus 767 ----------~~kl~DFGla~~~ 779 (955)
.+.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3899999977643
No 380
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=8e-16 Score=170.82 Aligned_cols=203 Identities=11% Similarity=0.042 Sum_probs=131.6
Q ss_pred ccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeec----cCCCCCCCCch
Q 002189 112 LKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGE----IPVSDGNSPGL 187 (955)
Q Consensus 112 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~----ip~~~~~~~~l 187 (955)
+++|+.|+|.+ +++..-+.+|.++++|+.|+|++|.++...+.+|.++.++..|.+..+..... -...+.++..+
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 77777777777 66645555677777777777777777655566676666666666555322100 00001011111
Q ss_pred h--------------------hhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEc
Q 002189 188 D--------------------MLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRF 247 (955)
Q Consensus 188 ~--------------------~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 247 (955)
. .+.+++.+.+.++-.. .-...+.....+|+.|+|++|+++...+.+|..+++|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 1 0111122222211000 000011112567999999999999777788999999999999
Q ss_pred ccCCCCCCccccccCCCCCC-EEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEEC
Q 002189 248 DRNSLSGPVPSNLNNLTSVN-DLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMM 319 (955)
Q Consensus 248 s~N~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~L 319 (955)
.+| ++...+..|.++++|+ .|+|.+ .++.+.+ .|.++++|+.|+|+.|+++. ..+..|.++++|+.|+.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~-I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITT-LGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCE-ECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCc-cchhhhcCCcchhhhcc
Confidence 988 7766678899999999 999988 7777766 58889999999999999975 56778999999998874
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=2.1e-15 Score=150.01 Aligned_cols=133 Identities=19% Similarity=0.219 Sum_probs=77.1
Q ss_pred cceeeeeccCCCcc-ccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEEE
Q 002189 216 MVLIHVLFDSNNLT-GELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYLD 293 (955)
Q Consensus 216 ~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~ 293 (955)
..|+.|++++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.+++.++. +..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44666666666665 55566666666666666666666643 5566666666666666666664443 33366666666
Q ss_pred CcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCC---cCCCCCCCCcEEEeecCccee
Q 002189 294 MSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIP---ADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 294 Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
|++|.+++...+..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 666666542222455666666666666666663333 255556666666666665543
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.57 E-value=2.1e-15 Score=149.90 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=98.9
Q ss_pred CCCCcEEEcccCCCC-CCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEE
Q 002189 239 VKSLEVVRFDRNSLS-GPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTL 317 (955)
Q Consensus 239 l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L 317 (955)
.++|+.|++++|.++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|.+++ .+|..+..+++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFG-GLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCS-CCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCch-HHHHHHhhCCCCCEE
Confidence 467777777777776 66777777777777888877777776 667777777788888777765 366767777777888
Q ss_pred ECcCCcceec-CCcCCCCCCCCcEEEeecCcceeeeC----CCcchhhhhhhcccCCccccccCC
Q 002189 318 MMENTNLKGQ-IPADLFSIPHLQTVVMKTNELNGTLD----LGTSYSENLLVNLQNNRISAYTER 377 (955)
Q Consensus 318 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~~~l~~L~L~~N~l~~~~~~ 377 (955)
+|++|++++. .+..+..+++|+.|+|++|++++.++ .+..+++|+.|++++|.+..++..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcccc
Confidence 8887777753 22667777777788888777777665 334466777777777777766543
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1e-14 Score=148.57 Aligned_cols=112 Identities=20% Similarity=0.302 Sum_probs=87.3
Q ss_pred CCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEE
Q 002189 240 KSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLM 318 (955)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 318 (955)
++|+.|+|++|.|+ .+|..|.++++|+.|+|++|.|+++++ .|.++++|++|+|++|+|++ ..+..|.++++|+.|+
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~-i~~~~f~~l~~L~~L~ 108 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-IPPRTFDGLKSLRLLS 108 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB-CCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCE-eCHHHhCCCCCCCEEE
Confidence 46777777777777 666777777777777777777777766 47777888888888888865 5566788888888888
Q ss_pred CcCCcceecCCcCCCCCCCCcEEEeecCcceeeeC
Q 002189 319 MENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLD 353 (955)
Q Consensus 319 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 353 (955)
|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 109 LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 88888886666678889999999999999987554
No 384
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.54 E-value=1.4e-13 Score=156.40 Aligned_cols=269 Identities=11% Similarity=0.102 Sum_probs=194.0
Q ss_pred CCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcC
Q 002189 85 TGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLY 164 (955)
Q Consensus 85 ~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~ 164 (955)
.....++.+.+-++ ++.+-..+|.+. +|+.+.|..| ++..-..+|.+. +|+.+.|.. .++..-+.+|.++++|+
T Consensus 110 ~~~~~l~~i~ip~~--i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~ 183 (401)
T 4fdw_A 110 EILKGYNEIILPNS--VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLK 183 (401)
T ss_dssp EECSSCSEEECCTT--CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCC
T ss_pred EecCCccEEEECCc--cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCC
Confidence 34467778888765 566667777774 7888888766 664555667774 688888875 66656667888888888
Q ss_pred eeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcE
Q 002189 165 WLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEV 244 (955)
Q Consensus 165 ~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 244 (955)
.++|.+|+++ .+|..... ..+|+.+.|..+ ++ .|+...|....+|+.+.+..| ++..-..+|.. .+|+.
T Consensus 184 ~l~l~~n~l~-~I~~~aF~------~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~ 252 (401)
T 4fdw_A 184 KADLSKTKIT-KLPASTFV------YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITT 252 (401)
T ss_dssp EEECTTSCCS-EECTTTTT------TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSE
T ss_pred eeecCCCcce-EechhhEe------ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccE
Confidence 8888888887 45543222 246677777744 66 788888888888888888764 66566667777 78888
Q ss_pred EEcccCCCCCCccccccCCCCCCEEEccCCcCc-----ccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEE
Q 002189 245 VRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLT-----GAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLM 318 (955)
Q Consensus 245 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-----~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 318 (955)
+.| .|.++......|.++++|+.+++.+|.+. .+.. .|.++++|+.++|.+ .++. .....|.++++|+.|.
T Consensus 253 i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~-I~~~aF~~c~~L~~l~ 329 (401)
T 4fdw_A 253 VKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRI-LGQGLLGGNRKVTQLT 329 (401)
T ss_dssp EEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCE-ECTTTTTTCCSCCEEE
T ss_pred EEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEE-EhhhhhcCCCCccEEE
Confidence 888 45566556778888888888888888776 3443 578888888888884 4653 5667788888899988
Q ss_pred CcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hh-hhhhhcccCCcccccc
Q 002189 319 MENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YS-ENLLVNLQNNRISAYT 375 (955)
Q Consensus 319 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~-~l~~L~L~~N~l~~~~ 375 (955)
|.+| ++......|.++ +|+.|++++|.+....+..+. +. .+..|++..|.+....
T Consensus 330 lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~y~ 386 (401)
T 4fdw_A 330 IPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEKYK 386 (401)
T ss_dssp ECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHHHH
T ss_pred ECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHHhh
Confidence 8655 666777788888 899999988888776655544 32 4557777777666443
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=3.3e-14 Score=144.77 Aligned_cols=127 Identities=22% Similarity=0.335 Sum_probs=105.1
Q ss_pred ccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccC
Q 002189 194 KHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSN 273 (955)
Q Consensus 194 ~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 273 (955)
+.+++++|+++ .+|..++ ..|++|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|.++++|+.|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 34566666666 6776554 46788888888887 6778899999999999999999987788899999999999999
Q ss_pred CcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcCCccee
Q 002189 274 NKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKG 326 (955)
Q Consensus 274 N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 326 (955)
|+|+++++ .|.++++|++|+|++|+|+. ..+..|..+++|+.|+|++|++..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISV-VPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCB-CCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCe-eChhhhhcCccccEEEeCCCCeec
Confidence 99999887 48889999999999999975 455578899999999999999873
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=4.7e-14 Score=141.43 Aligned_cols=114 Identities=19% Similarity=0.257 Sum_probs=88.4
Q ss_pred CCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEE
Q 002189 240 KSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLM 318 (955)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 318 (955)
++|+.|++++|++++..+..|..+++|++|+|++|.|++.++. +..+++|++|+|++|.|++ ..+..|..+++|+.|+
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQS-LPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccc-cCHHHhhCCcccCEEE
Confidence 5677777777777766566677778888888888888777664 5778888888888888875 4555678888888888
Q ss_pred CcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCC
Q 002189 319 MENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDL 354 (955)
Q Consensus 319 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 354 (955)
|++|++++..+..+..+++|+.|+|++|++++..+.
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 888888866666678899999999999999886653
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.53 E-value=1.9e-13 Score=155.26 Aligned_cols=261 Identities=13% Similarity=0.089 Sum_probs=208.2
Q ss_pred cccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhh
Q 002189 111 NLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDML 190 (955)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L 190 (955)
....++.+.+.+ .++..-..+|.+. +|+.+.|..| ++..-..+|.+ .+|+.+.|.+ .++ .|+. ..+..+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~-~I~~-----~aF~~c 179 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLE-QLKE-----DIFYYC 179 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCC-EECS-----STTTTC
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-Ccc-EehH-----HHhhCc
Confidence 346677777764 4554556778875 7999999877 77566778888 5799999986 555 2322 235667
Q ss_pred hccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEE
Q 002189 191 VRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLY 270 (955)
Q Consensus 191 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 270 (955)
.+|+.++|..|+++ .|+...|.. ..|+.+.|.. ++...-..+|..+++|+.++|..| ++..-..+|.+ .+|+.+.
T Consensus 180 ~~L~~l~l~~n~l~-~I~~~aF~~-~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~ 254 (401)
T 4fdw_A 180 YNLKKADLSKTKIT-KLPASTFVY-AGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVK 254 (401)
T ss_dssp TTCCEEECTTSCCS-EECTTTTTT-CCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEE
T ss_pred ccCCeeecCCCcce-EechhhEee-cccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEE
Confidence 78899999999999 999999984 7899999984 488778889999999999999975 56455677777 8999999
Q ss_pred ccCCcCcccCC-CCCCCCCCCEEECcCCCCCC----CCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeec
Q 002189 271 LSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDA----SEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKT 345 (955)
Q Consensus 271 Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 345 (955)
| .|.++.+.. .|.++++|+.+++.+|.+.. ......|.++++|+.++|. |.++..-...|.++++|+.|+|..
T Consensus 255 l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 255 L-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp E-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECT
T ss_pred e-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECc
Confidence 9 566777766 68999999999999998741 1467789999999999999 458877888899999999999965
Q ss_pred CcceeeeCCCcchhhhhhhcccCCccccccCCCCCCC-cceeEecC
Q 002189 346 NELNGTLDLGTSYSENLLVNLQNNRISAYTERGGAPA-VNLTLIDN 390 (955)
Q Consensus 346 N~l~~~~~~~~~~~~l~~L~L~~N~l~~~~~~~~~~~-~~L~~l~n 390 (955)
| ++......|...+|+.+++++|.+..+....|.+. .++..+.-
T Consensus 333 ~-l~~I~~~aF~~~~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~v 377 (401)
T 4fdw_A 333 N-VTQINFSAFNNTGIKEVKVEGTTPPQVFEKVWYGFPDDITVIRV 377 (401)
T ss_dssp T-CCEECTTSSSSSCCCEEEECCSSCCBCCCSSCCCSCTTCCEEEE
T ss_pred c-ccEEcHHhCCCCCCCEEEEcCCCCcccccccccCCCCCccEEEe
Confidence 5 88877777776688899999999999999888776 34444433
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.53 E-value=3.3e-15 Score=145.30 Aligned_cols=127 Identities=18% Similarity=0.219 Sum_probs=66.3
Q ss_pred cceeeeeccCCCcc-ccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCC-CCCCCCCCEEE
Q 002189 216 MVLIHVLFDSNNLT-GELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPN-LTGLSVLSYLD 293 (955)
Q Consensus 216 ~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~ 293 (955)
.+|+.|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|.+++.++. +..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34555555555555 45555555555566666666555533 4555555555555555555553332 33355555555
Q ss_pred CcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCC---cCCCCCCCCcEEEee
Q 002189 294 MSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIP---ADLFSIPHLQTVVMK 344 (955)
Q Consensus 294 Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 344 (955)
|++|.+++...+..+..+++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555431122445555555555555555554333 244555555555544
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.52 E-value=8e-15 Score=142.60 Aligned_cols=129 Identities=16% Similarity=0.172 Sum_probs=112.2
Q ss_pred CCCCCcEEEcccCCCC-CCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCE
Q 002189 238 LVKSLEVVRFDRNSLS-GPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTT 316 (955)
Q Consensus 238 ~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~ 316 (955)
..++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. +.+..+++|++|+|++|.+++ .+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSG-GLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCS-CTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccc-hHHHHhhhCCCCCE
Confidence 3478999999999998 78999999999999999999999988 778999999999999999976 47888888999999
Q ss_pred EECcCCcceec-CCcCCCCCCCCcEEEeecCcceeeeC----CCcchhhhhhhcccC
Q 002189 317 LMMENTNLKGQ-IPADLFSIPHLQTVVMKTNELNGTLD----LGTSYSENLLVNLQN 368 (955)
Q Consensus 317 L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~~~l~~L~L~~ 368 (955)
|++++|.+++. .+..+..+++|++|+|++|++++.++ .+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999973 45889999999999999999998766 233466777777753
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=3.8e-14 Score=142.00 Aligned_cols=129 Identities=16% Similarity=0.233 Sum_probs=64.9
Q ss_pred ccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCC-CCCCCCCEEE
Q 002189 215 DMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNL-TGLSVLSYLD 293 (955)
Q Consensus 215 ~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~l~~L~~L~ 293 (955)
..+|+.|++++|+++. +|......++|+.|+|++|.|++. ..|..+++|+.|+|++|.|++.++.+ ..+++|++|+
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 3445555555555553 233222222555555555555532 44555555555555555555554443 4455555555
Q ss_pred CcCCCCCCCCCCh--hhcCCCCCCEEECcCCcceecCCcC----CCCCCCCcEEEeecCcce
Q 002189 294 MSNNSFDASEVPS--WFSSMQSLTTLMMENTNLKGQIPAD----LFSIPHLQTVVMKTNELN 349 (955)
Q Consensus 294 Ls~N~l~~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 349 (955)
|++|+|+. +|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||+++|.+.
T Consensus 95 L~~N~i~~--~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLVE--LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCCC--GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCCc--chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 55555532 333 4555555555555555554 33332 444555555555555443
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=2.1e-16 Score=161.83 Aligned_cols=131 Identities=23% Similarity=0.352 Sum_probs=71.3
Q ss_pred cccccccccccccccccCCCCCC------ccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCC
Q 002189 109 IGNLKKLSNLMLVGCSFSGPIPD------SIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDG 182 (955)
Q Consensus 109 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~ 182 (955)
+.....++.++++.+.+++.+|. .|..+++|++|+|++|+|++ +| .+.++++|++|+|++|+++
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-------- 83 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-------- 83 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC--------
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc--------
Confidence 34455666666666666666555 45555555555555555553 34 4555555555555555544
Q ss_pred CCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccC
Q 002189 183 NSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNN 262 (955)
Q Consensus 183 ~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 262 (955)
.+|..+..+++|+.|+|++|++++ +| .+..
T Consensus 84 ------------------------------------------------~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~ 113 (198)
T 1ds9_A 84 ------------------------------------------------KIENLDAVADTLEELWISYNQIAS-LS-GIEK 113 (198)
T ss_dssp ------------------------------------------------SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHH
T ss_pred ------------------------------------------------cccchhhcCCcCCEEECcCCcCCc-CC-cccc
Confidence 122233334567777777777764 44 4666
Q ss_pred CCCCCEEEccCCcCcccCC--CCCCCCCCCEEECcCCCC
Q 002189 263 LTSVNDLYLSNNKLTGAMP--NLTGLSVLSYLDMSNNSF 299 (955)
Q Consensus 263 l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l 299 (955)
+++|+.|+|++|.|++.++ .+..+++|++|++++|++
T Consensus 114 l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 114 LVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 6666666666666654332 344444444444444444
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=1.2e-15 Score=156.21 Aligned_cols=87 Identities=21% Similarity=0.265 Sum_probs=76.5
Q ss_pred cCCCCcccEEecCCCCCCccCCCC------CcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCC
Q 002189 84 ITGLTELHTLDLSNNKDLRGPLPT------TIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSI 157 (955)
Q Consensus 84 l~~l~~L~~L~Ls~N~~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 157 (955)
+.....++.++|+.+. +.+.+|. .|..+++|++|+|++|++++ +| .+..+++|++|+|++|+|+ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~-l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVE-LHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEE-CCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeE-eccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 4556788888888886 8888787 89999999999999999995 77 8999999999999999999 678778
Q ss_pred CCCCCcCeeecCCceee
Q 002189 158 GNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 158 ~~L~~L~~L~L~~N~l~ 174 (955)
..+++|++|+|++|+++
T Consensus 90 ~~~~~L~~L~L~~N~l~ 106 (198)
T 1ds9_A 90 AVADTLEELWISYNQIA 106 (198)
T ss_dssp HHHHHCSEEEEEEEECC
T ss_pred hcCCcCCEEECcCCcCC
Confidence 88889999999988887
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=7.1e-14 Score=140.07 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=106.1
Q ss_pred ccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCCChhhcCCCCC
Q 002189 235 TLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSL 314 (955)
Q Consensus 235 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L 314 (955)
.+..+.+|+.|++++|.++ .+|......++|+.|+|++|.|++. +.+..+++|++|+|++|.|++ ..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccc-cCcchhhcCCCC
Confidence 4567788899999999888 4555333344899999999998887 678888899999999999875 344556888899
Q ss_pred CEEECcCCcceecCCc--CCCCCCCCcEEEeecCcceeeeCC----CcchhhhhhhcccCCccccc
Q 002189 315 TTLMMENTNLKGQIPA--DLFSIPHLQTVVMKTNELNGTLDL----GTSYSENLLVNLQNNRISAY 374 (955)
Q Consensus 315 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~~~l~~L~L~~N~l~~~ 374 (955)
+.|+|++|+|+ .+|. .+..+++|+.|+|++|+++..++. ...+++++.||+++|.+...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 99999999886 4555 778888999999999998865543 44577788899998887754
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=3.5e-13 Score=134.19 Aligned_cols=105 Identities=25% Similarity=0.272 Sum_probs=93.0
Q ss_pred eEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccC
Q 002189 67 TSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNS 146 (955)
Q Consensus 67 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 146 (955)
+.|++++++++. +|..+ .++|++|+|++|+ +.+..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~-i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQ-ITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSC-CCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCc-CCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 356778888884 66555 3899999999997 9999899999999999999999999977777889999999999999
Q ss_pred CCCcCcCCCCCCCCCCcCeeecCCceeee
Q 002189 147 NGFSGRVPPSIGNLSNLYWLDLTDNKLEG 175 (955)
Q Consensus 147 N~l~~~~p~~~~~L~~L~~L~L~~N~l~g 175 (955)
|+|++..+..|.++++|++|+|++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 99997777789999999999999999973
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=1.3e-12 Score=130.05 Aligned_cols=110 Identities=24% Similarity=0.314 Sum_probs=85.0
Q ss_pred CcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECc
Q 002189 242 LEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMME 320 (955)
Q Consensus 242 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls 320 (955)
.+.|++++|.|+ .+|..+. ++|+.|+|++|.|+++++ .|.++++|++|+|++|+|++ ..+..|.++++|+.|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCc-cChhhccCCCCCCEEECC
Confidence 456777777777 4665553 777888888888887766 47778888888888888875 555667888888888888
Q ss_pred CCcceecCCcCCCCCCCCcEEEeecCcceeeeCCC
Q 002189 321 NTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLG 355 (955)
Q Consensus 321 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 355 (955)
+|+|++..+..|..+++|++|+|++|++++..+..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 88888766777889999999999999998766543
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=1.5e-12 Score=129.99 Aligned_cols=110 Identities=22% Similarity=0.299 Sum_probs=96.0
Q ss_pred cEEeCCCCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCC
Q 002189 58 GIGCTNSRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQ 137 (955)
Q Consensus 58 gv~C~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 137 (955)
+..|.. +.|++++++++ .+|..+. ++|++|+|++|+ +.+..|..|.++++|++|+|++|+|++..+..|..++
T Consensus 9 ~C~C~~---~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 81 (174)
T 2r9u_A 9 QCSCDQ---TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQ-ITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLT 81 (174)
T ss_dssp TSEECS---SEEECCSSCCS-SCCSCCC--TTCSEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEECC---cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCC-ccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcc
Confidence 344642 57899999997 6676664 899999999997 8988899999999999999999999976666789999
Q ss_pred CCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 138 ELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 138 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
+|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 82 ~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 82 QLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred hhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 9999999999999766667999999999999999997
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=3e-12 Score=127.85 Aligned_cols=109 Identities=22% Similarity=0.280 Sum_probs=79.2
Q ss_pred cEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCCCCEEECcC
Q 002189 243 EVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQSLTTLMMEN 321 (955)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~ 321 (955)
+.+++++|+++ .+|..+. ++|+.|+|++|+|+++++ .|.++++|++|+|++|+|++ ..+..|.++++|+.|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECCC
Confidence 46677777775 5565553 677777777777777765 46677777777777777765 3444567888888888888
Q ss_pred CcceecCCcCCCCCCCCcEEEeecCcceeeeCCC
Q 002189 322 TNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLG 355 (955)
Q Consensus 322 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 355 (955)
|+|++..+..|..+++|+.|+|++|++....+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 8888655556888899999999999988765543
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.25 E-value=3e-10 Score=129.11 Aligned_cols=302 Identities=12% Similarity=0.056 Sum_probs=186.3
Q ss_pred CEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEc
Q 002189 65 RVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSL 144 (955)
Q Consensus 65 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 144 (955)
.++++.|.. +++.+-..+|.++++|+.++|.++ +..+-...|.++.+|+.+.+..+ +...-...|.++..++....
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~--l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS--VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT--CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECC
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC--ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccC
Confidence 556666643 355444455666666666666543 34444455666666666555433 22233344444433322222
Q ss_pred cCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeecc
Q 002189 145 NSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFD 224 (955)
Q Consensus 145 s~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~ 224 (955)
.. +......+|.++++|+.+.+.++..+ ++. ..+..+.+|+.+.+..| ++ .|+...|.....|+.+.+.
T Consensus 148 ~~--~~~i~~~aF~~c~~L~~i~l~~~~~~--I~~-----~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 148 EG--VTVIGDEAFATCESLEYVSLPDSMET--LHN-----GLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEFP 216 (394)
T ss_dssp TT--CCEECTTTTTTCTTCCEEECCTTCCE--ECT-----TTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCCC
T ss_pred cc--ccccchhhhcccCCCcEEecCCccce--ecc-----ccccCCCCceEEEcCCC-ce-EeCchhhccccccceeecC
Confidence 22 22123456777777777777655432 222 12344555666677655 54 6677777777777777666
Q ss_pred CCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCCCCCCCCCCCEEECcCCCCCCCCC
Q 002189 225 SNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMPNLTGLSVLSYLDMSNNSFDASEV 304 (955)
Q Consensus 225 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 304 (955)
.+... +........+|+.+.+..+ ++......|.++.+|+.+.+..+..+-....+.....|+.+.+..+.+ .
T Consensus 217 ~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i----~ 289 (394)
T 4fs7_A 217 NSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV----P 289 (394)
T ss_dssp TTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE----C
T ss_pred CCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee----c
Confidence 55432 2233344567777777543 332445667778888888887775553344677788888888777654 3
Q ss_pred ChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCccccccCCCCCCCc
Q 002189 305 PSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNRISAYTERGGAPAV 383 (955)
Q Consensus 305 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~~~~~~~~~~~~ 383 (955)
...|..+.+|+.+.+.++ ++..-...|.++.+|+.++|..+ ++......|. ..+|+.++|..| ++.+...+|.+..
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 456778888888888765 66566677888888999888654 7766666665 467778888776 8888888898888
Q ss_pred ceeEecCc
Q 002189 384 NLTLIDNP 391 (955)
Q Consensus 384 ~L~~l~n~ 391 (955)
+|+.++.|
T Consensus 367 ~L~~i~lp 374 (394)
T 4fs7_A 367 NLKKVELP 374 (394)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEC
Confidence 88877765
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=7.6e-12 Score=139.65 Aligned_cols=110 Identities=26% Similarity=0.326 Sum_probs=94.6
Q ss_pred CC-CCCCccEEeCCCCEeEEEecCC-cCccccCcCcCCCCcccEEecCC-CCCCccCCCCCcccccccccccccccccCC
Q 002189 51 PC-GDNWEGIGCTNSRVTSITLSGM-GLKGQLSGDITGLTELHTLDLSN-NKDLRGPLPTTIGNLKKLSNLMLVGCSFSG 127 (955)
Q Consensus 51 ~C-~~~w~gv~C~~~~v~~L~L~~~-~l~~~~~~~l~~l~~L~~L~Ls~-N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 127 (955)
.| .|.|..|.|+ ++ +|+. +|. |..+++|++|+|++ |+ +.+..+..|.+|++|+.|+|++|+|++
T Consensus 4 ~c~~C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~-l~~~~~~~~~~l~~L~~L~l~~N~l~~ 70 (347)
T 2ifg_A 4 ACCPHGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQH-LQHLELRDLRGLGELRNLTIVKSGLRF 70 (347)
T ss_dssp SSCCSSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSS-CCEECGGGSCSCCCCSEEECCSSCCCE
T ss_pred cCccccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCC-CCCcChhHhccccCCCEEECCCCccce
Confidence 46 5567666665 44 6774 677 99999999999996 86 888888899999999999999999999
Q ss_pred CCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 128 PIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 128 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
..|..|.+|++|++|+|++|+|++..+..|..++ |+.|+|.+|.|.
T Consensus 71 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 71 VAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp ECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred eCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 9999999999999999999999976666676666 999999999987
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=4.2e-11 Score=128.00 Aligned_cols=147 Identities=17% Similarity=0.152 Sum_probs=114.6
Q ss_pred HHHHhcCCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-CCCcceEEEEEEeCCeEEE
Q 002189 623 VKKYTNNFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-HKNLVSLLGFCFDRGEQML 701 (955)
Q Consensus 623 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 701 (955)
+......|.....++.|+.+.||++... ++.+++|+...........+.+|+++++.+. |..+.++++++.+.+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 4455667887788888899999999754 6899999987532223346889999999995 6778899999999899999
Q ss_pred EEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcc-----------------------------------
Q 002189 702 IYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELA----------------------------------- 746 (955)
Q Consensus 702 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 746 (955)
||||++|.+|.+.+... .....++.+++++++.||+..
T Consensus 88 v~e~i~G~~l~~~~~~~-------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 88 LMSEADGVLCSEEYEDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEECCSSEEHHHHCCTT-------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEecCCeehhhccCCc-------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999999887754211 123467888999999999811
Q ss_pred ---------------------CCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 747 ---------------------NPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 747 ---------------------~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
...++|+|+++.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876667799998764
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=4.6e-13 Score=150.64 Aligned_cols=162 Identities=20% Similarity=0.157 Sum_probs=88.1
Q ss_pred CCCCcEEEccCCCCcCcCCCCCCC-----CCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCcc
Q 002189 136 LQELVLLSLNSNGFSGRVPPSIGN-----LSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEK 210 (955)
Q Consensus 136 l~~L~~L~Ls~N~l~~~~p~~~~~-----L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~ 210 (955)
++.|+.|+|++|.|+......+.. .++|+.|+|++|.|+......+ ...+.+|+.|+|++|
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l-----~~~L~~L~~L~Ls~n--------- 136 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTL-----LPVFLRARKLGLQLN--------- 136 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHT-----HHHHHTEEEEECCSS---------
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHH-----HHHHHhccHhhcCCC---------
Confidence 456888888888887543333322 2678888888887752211000 112333444444444
Q ss_pred ccCCccceeeeeccCCCccccCCccc-----CCCCCCcEEEcccCCCCC----CccccccCCCCCCEEEccCCcCcccC-
Q 002189 211 LFRPDMVLIHVLFDSNNLTGELPATL-----GLVKSLEVVRFDRNSLSG----PVPSNLNNLTSVNDLYLSNNKLTGAM- 280 (955)
Q Consensus 211 ~~~~~~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~- 280 (955)
+|+......+ ...++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+...
T Consensus 137 ----------------~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~ 200 (372)
T 3un9_A 137 ----------------SLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGL 200 (372)
T ss_dssp ----------------CCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHH
T ss_pred ----------------CCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHH
Confidence 4433222222 234567777777777653 23444566667777777777766432
Q ss_pred ----CCCCCCCCCCEEECcCCCCCCC---CCChhhcCCCCCCEEECcCCcceec
Q 002189 281 ----PNLTGLSVLSYLDMSNNSFDAS---EVPSWFSSMQSLTTLMMENTNLKGQ 327 (955)
Q Consensus 281 ----~~~~~l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~Ls~N~l~~~ 327 (955)
..+...++|++|+|++|.|+.. .+...+...++|++|+|++|.|+..
T Consensus 201 ~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 201 ELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 1244455677777777766431 1223344456677777777766643
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=5.8e-11 Score=132.50 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=72.4
Q ss_pred ccccCC-cccccCCccccCCccceeeeeccC-CCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccC
Q 002189 196 FHFGKN-QLSGSIPEKLFRPDMVLIHVLFDS-NNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSN 273 (955)
Q Consensus 196 L~L~~N-~l~g~ip~~~~~~~~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 273 (955)
++++++ +|+ .||. +..+.+|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 13 v~~~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp EECCSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEcCCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 355555 555 5665 44455677777775 777766667777788888888888888777777777888888888888
Q ss_pred CcCcccCCCCCCCCCCCEEECcCCCCCC
Q 002189 274 NKLTGAMPNLTGLSVLSYLDMSNNSFDA 301 (955)
Q Consensus 274 N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 301 (955)
|+|+++++.+.....|+.|+|++|++..
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccC
Confidence 8887777754443347788888877765
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=1.4e-10 Score=123.56 Aligned_cols=129 Identities=19% Similarity=0.193 Sum_probs=98.5
Q ss_pred eccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCc--ceEEEEEEeCCeEEEEEEecCCCCcccc
Q 002189 637 GSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNL--VSLLGFCFDRGEQMLIYEFVPNGSLGDS 714 (955)
Q Consensus 637 G~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~~~~lV~e~~~~gsL~~~ 714 (955)
+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.++ .+++++...++..++||||+++.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 355669999998777888999997653 22457889999999975554 56888888888899999999998884
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcc------------------------------------------------
Q 002189 715 LSGKNGIRLDWIRRLKIALGAARGLSYLHELA------------------------------------------------ 746 (955)
Q Consensus 715 l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------------ 746 (955)
... .+ ...++.++++.|+.||+..
T Consensus 104 ~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 221 11 2356777888888888642
Q ss_pred -------CCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 747 -------NPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 747 -------~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
...++|+|++|.||+++++..+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12289999999999998876677999998753
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.09 E-value=2.1e-09 Score=122.12 Aligned_cols=292 Identities=11% Similarity=0.053 Sum_probs=219.6
Q ss_pred cCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCC
Q 002189 75 GLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVP 154 (955)
Q Consensus 75 ~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 154 (955)
.++.+-..+|.++++|+.+.|..+ ++.+-..+|.++++|+.++|..+ ++..-...|.++.+|+.+.+..+ +.....
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~--i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST--VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT--CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC--ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc
Confidence 345555678999999999999864 67777788999999999999765 66455677999999999888755 444556
Q ss_pred CCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccccCCc
Q 002189 155 PSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGELPA 234 (955)
Q Consensus 155 ~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~ 234 (955)
.+|.+...++.........-| -..+..+.+|+.+.+.++ +. .|+...|....+|+.+.+..| +......
T Consensus 134 ~aF~~~~~~~~~~~~~~~~i~--------~~aF~~c~~L~~i~l~~~-~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~ 202 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGVTVIG--------DEAFATCESLEYVSLPDS-ME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDY 202 (394)
T ss_dssp TTTTTCCCSEEECCTTCCEEC--------TTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCBCCCCTT-CCEECTT
T ss_pred eeeecccccccccCccccccc--------hhhhcccCCCcEEecCCc-cc-eeccccccCCCCceEEEcCCC-ceEeCch
Confidence 678777655544444433221 123556677788888755 44 788999999999999999876 6656677
Q ss_pred ccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhcCCCC
Q 002189 235 TLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFSSMQS 313 (955)
Q Consensus 235 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~ 313 (955)
+|..+..|+.+.+..+... +........+|+.+.+..+ ++.+.. .+.+..+|+.+.+..+..+ .....|..+..
T Consensus 203 ~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~--i~~~~F~~~~~ 277 (394)
T 4fs7_A 203 CFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR--IGGSLFYNCSG 277 (394)
T ss_dssp TTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE--ECSCTTTTCTT
T ss_pred hhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce--eeccccccccc
Confidence 8999999999988876543 3445556688999988654 344443 5788999999999888653 46677889999
Q ss_pred CCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCccccccCCCCCCCcceeEecCc
Q 002189 314 LTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNRISAYTERGGAPAVNLTLIDNP 391 (955)
Q Consensus 314 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l~n~ 391 (955)
|+.+.+..+.+ ....|..+.+|+.+.+.++ ++......+. ..+|+.++|.++ ++.+...+|.+..+|+.+..|
T Consensus 278 l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 278 LKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp CCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 99998877653 3456778999999999765 7776666665 567888999754 899999999999999888776
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.06 E-value=2.5e-12 Score=144.69 Aligned_cols=135 Identities=21% Similarity=0.198 Sum_probs=80.1
Q ss_pred cceeeeeccCCCccccCCccc-CCCCCCcEEEcccCCCCCCccccc-----cCCCCCCEEEccCCcCcccCC-----CCC
Q 002189 216 MVLIHVLFDSNNLTGELPATL-GLVKSLEVVRFDRNSLSGPVPSNL-----NNLTSVNDLYLSNNKLTGAMP-----NLT 284 (955)
Q Consensus 216 ~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~~-----~~~ 284 (955)
..|++|+|++|+++......+ ..+++|+.|+|++|.|+......+ ...++|+.|+|++|.|+.... .+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 456667777776654333222 234577788888887764333333 245677788888777765321 235
Q ss_pred CCCCCCEEECcCCCCCCC---CCChhhcCCCCCCEEECcCCcceec----CCcCCCCCCCCcEEEeecCccee
Q 002189 285 GLSVLSYLDMSNNSFDAS---EVPSWFSSMQSLTTLMMENTNLKGQ----IPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 285 ~l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
.+++|++|+|++|.|+.. .++..+...++|+.|+|++|.|+.. +...+...++|++|+|++|+|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 566777777777776431 1134455566777777777777642 33333445667777777776654
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.99 E-value=1.1e-08 Score=116.07 Aligned_cols=103 Identities=13% Similarity=0.118 Sum_probs=63.6
Q ss_pred EeEEEecCCcCccccCcCcCCCCcccEEecCCCC--CCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 66 VTSITLSGMGLKGQLSGDITGLTELHTLDLSNNK--DLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 66 v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~--~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
++++.|.. .++.+-..+|.++++|+.+.+..|. .++.+-..+|.++.+|+.+.+..+ ++......|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 66666654 3665556677777777777776542 134444556777777777766544 3434455677777777777
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCc
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDN 171 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N 171 (955)
+..+. .......|.++.+|+.+.+.++
T Consensus 144 lp~~~-~~I~~~~F~~c~~L~~i~~~~~ 170 (394)
T 4gt6_A 144 IPEGV-TSVADGMFSYCYSLHTVTLPDS 170 (394)
T ss_dssp CCTTC-CEECTTTTTTCTTCCEEECCTT
T ss_pred cccee-eeecccceecccccccccccce
Confidence 76443 3244556677777777777654
No 407
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93 E-value=3.3e-09 Score=118.77 Aligned_cols=142 Identities=18% Similarity=0.286 Sum_probs=107.3
Q ss_pred ccCeeeccCceEEEEEEeCCCcEEEEEEcc--cCCc-chhHHHHHHHHHHHhcc--CCCcceEEEEEEeC---CeEEEEE
Q 002189 632 DANDVGSGGYGKVYKGTLPNGQLIAIKRAQ--QGSM-QGGQEFKMEIELLSRVH--HKNLVSLLGFCFDR---GEQMLIY 703 (955)
Q Consensus 632 ~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lV~ 703 (955)
..+.|+.|.++.||+....+ ..+++|+.. .... .....+.+|+++++.+. +..+.++++++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998754 678888876 3321 22356888999999997 45678999988776 4589999
Q ss_pred EecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhcc-------------------------------------
Q 002189 704 EFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELA------------------------------------- 746 (955)
Q Consensus 704 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------- 746 (955)
||+++..+.+... ..++...+..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 121 EFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp ECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9999888755221 13678888899999999999999731
Q ss_pred ------------------CCCeeccCCCCccEEEcCCCc--eEEeecccccc
Q 002189 747 ------------------NPPIIHRDIKSSNILLDERLN--AKVADFGLSKS 778 (955)
Q Consensus 747 ------------------~~~ivHrDlk~~NIll~~~~~--~kl~DFGla~~ 778 (955)
...++|+|+++.||+++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245899999999999997753 68999998764
No 408
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.93 E-value=1.9e-08 Score=114.13 Aligned_cols=295 Identities=8% Similarity=0.069 Sum_probs=177.8
Q ss_pred CccccCcCcCCCC-cccEEecCCCCCCccCCCCCcccccccccccccccc---cCCCCCCccccCCCCcEEEccCCCCcC
Q 002189 76 LKGQLSGDITGLT-ELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCS---FSGPIPDSIGSLQELVLLSLNSNGFSG 151 (955)
Q Consensus 76 l~~~~~~~l~~l~-~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 151 (955)
++.+-..+|.+.. .|+.+.|-.+ ++.+-..+|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++.
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s--vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT--VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT--CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC--eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 3434456788774 6999999875 677788899999999999998875 55445677999999999988765 554
Q ss_pred cCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCcccc
Q 002189 152 RVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTGE 231 (955)
Q Consensus 152 ~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~ 231 (955)
....+|.++.+|+.+.+..+.-. ++. ..+.....|+.+.+..+ ++ .|....|.. ..|+.+.+..+- ...
T Consensus 128 I~~~aF~~c~~L~~i~lp~~~~~--I~~-----~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~-~~l~~i~ip~~~-~~i 196 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEGVTS--VAD-----GMFSYCYSLHTVTLPDS-VT-AIEERAFTG-TALTQIHIPAKV-TRI 196 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTTCCE--ECT-----TTTTTCTTCCEEECCTT-CC-EECTTTTTT-CCCSEEEECTTC-CEE
T ss_pred ehhhhhhhhcccccccccceeee--ecc-----cceecccccccccccce-ee-Eeccccccc-cceeEEEECCcc-ccc
Confidence 66678999999999999765432 222 22344556666677654 55 677777765 457777776543 335
Q ss_pred CCcccCCCCCCcEEEcccCCCCCCcccc--------------ccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcC
Q 002189 232 LPATLGLVKSLEVVRFDRNSLSGPVPSN--------------LNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSN 296 (955)
Q Consensus 232 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--------------l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~ 296 (955)
...+|..+.+|+......+.... +... +.....+..+.+. +.++.+.. .|.++.+|+.+.+..
T Consensus 197 ~~~af~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~ 274 (394)
T 4gt6_A 197 GTNAFSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPD 274 (394)
T ss_dssp CTTTTTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCT
T ss_pred ccchhhhccccceeccccccccc-ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEeccc
Confidence 55677777777777665544331 1111 1111222333332 12222222 355566666666655
Q ss_pred CCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCcccccc
Q 002189 297 NSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNRISAYT 375 (955)
Q Consensus 297 N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~~~~ 375 (955)
+..+ .....|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++......|. ..+|+.+.|..+ ++.+.
T Consensus 275 ~~~~--I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~ 349 (394)
T 4gt6_A 275 SVVS--IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIP 349 (394)
T ss_dssp TCCE--ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCC
T ss_pred ccce--ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEh
Confidence 4431 344555666666666664 3344444455566666666666543 5444444444 345556666433 66666
Q ss_pred CCCCCCCcceeEecCc
Q 002189 376 ERGGAPAVNLTLIDNP 391 (955)
Q Consensus 376 ~~~~~~~~~L~~l~n~ 391 (955)
..+|.+..+|+.++.+
T Consensus 350 ~~aF~~C~~L~~i~~~ 365 (394)
T 4gt6_A 350 ESAFSNCTALNNIEYS 365 (394)
T ss_dssp GGGGTTCTTCCEEEES
T ss_pred HhHhhCCCCCCEEEEC
Confidence 6666666555555444
No 409
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.83 E-value=2.8e-09 Score=116.44 Aligned_cols=186 Identities=20% Similarity=0.222 Sum_probs=121.6
Q ss_pred cCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-CCC--cceEEEEEEeCC---eEEEEEEec
Q 002189 633 ANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-HKN--LVSLLGFCFDRG---EQMLIYEFV 706 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lV~e~~ 706 (955)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+.+......+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 46888886432 33467899999999884 433 335554443333 348899999
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-----------------------------------------
Q 002189 707 PNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL----------------------------------------- 745 (955)
Q Consensus 707 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------- 745 (955)
++.++.+... ..++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988865322 1356677778888888888888851
Q ss_pred --------------cCCCeeccCCCCccEEEcC--CCceEEeecccccccCCCCCccee-------------eeeecCCC
Q 002189 746 --------------ANPPIIHRDIKSSNILLDE--RLNAKVADFGLSKSMSDSEKDHIT-------------TQVKGTMG 796 (955)
Q Consensus 746 --------------~~~~ivHrDlk~~NIll~~--~~~~kl~DFGla~~~~~~~~~~~~-------------~~~~gt~~ 796 (955)
..+.++|+|+++.||++++ +..+.|+||+.+..-... .+-.. ......++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHcC
Confidence 1235899999999999998 556889999988653221 10000 00001111
Q ss_pred CCC-HHHhhhCCCCChhhhHHHHHHHHHHHhCCCCC
Q 002189 797 YLD-PEYYMTQQLTEKSDVYSFGVLMLELLTGRRPI 831 (955)
Q Consensus 797 y~a-PE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~ 831 (955)
+.. |+.... .....+.|++|.++|++.+|..++
T Consensus 254 ~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 222 222211 122368999999999999998775
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.76 E-value=3.1e-10 Score=126.52 Aligned_cols=204 Identities=16% Similarity=0.186 Sum_probs=115.9
Q ss_pred CCEeEEEecCCcCcc-c-------cCcCcCCCCcccEEecCCCCCCc---------cCCCCCcccccccccccccccccC
Q 002189 64 SRVTSITLSGMGLKG-Q-------LSGDITGLTELHTLDLSNNKDLR---------GPLPTTIGNLKKLSNLMLVGCSFS 126 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~-~-------~~~~l~~l~~L~~L~Ls~N~~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~ 126 (955)
.+|+.|.+...++.| . +..++..+++|+.|.+.++. .. +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~-~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDID-FEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCC-TTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcc-hhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 478888887666542 1 13345567888888887653 21 112233455567777777766311
Q ss_pred CCCCCccccCCCCcEEEccCCCCcCcCCCCCC--CCCCcCeeecCC--ceeeeccCCCCCCCCchhhhhccccccccCCc
Q 002189 127 GPIPDSIGSLQELVLLSLNSNGFSGRVPPSIG--NLSNLYWLDLTD--NKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQ 202 (955)
Q Consensus 127 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~L~~L~~L~L~~--N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~ 202 (955)
.++. + .+++|++|+|..|.++......+. .+++|+.|+|+. |...|.. .+..+
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--------~~~~l------------ 242 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--------DMNVF------------ 242 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--------CGGGT------------
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--------hHHHH------------
Confidence 2232 3 266777777777766543222332 567777777642 2211100 00000
Q ss_pred ccccCCcccc-CCccceeeeeccCCCccccCCccc---CCCCCCcEEEcccCCCCCC----ccccccCCCCCCEEEccCC
Q 002189 203 LSGSIPEKLF-RPDMVLIHVLFDSNNLTGELPATL---GLVKSLEVVRFDRNSLSGP----VPSNLNNLTSVNDLYLSNN 274 (955)
Q Consensus 203 l~g~ip~~~~-~~~~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N 274 (955)
...+. ...++|+.|.|.+|.+.+..+..+ ..+++|++|+|+.|.|.+. ++..+..+++|+.|+|++|
T Consensus 243 -----~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 243 -----RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp -----GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred -----HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 00000 124567777777777765433333 2578899999999988853 3444456789999999999
Q ss_pred cCcccCC-CCCC-CCCCCEEECcCCC
Q 002189 275 KLTGAMP-NLTG-LSVLSYLDMSNNS 298 (955)
Q Consensus 275 ~l~~~~~-~~~~-l~~L~~L~Ls~N~ 298 (955)
.|+.... .+.. + ...++++.|+
T Consensus 318 ~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 318 YLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp BCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred cCCHHHHHHHHHHc--CCEEEecCCc
Confidence 8875432 1221 1 3568888887
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.69 E-value=1.4e-09 Score=121.29 Aligned_cols=40 Identities=25% Similarity=0.312 Sum_probs=22.0
Q ss_pred CCCCCEEECcCCcceec----CCcCCCCCCCCcEEEeecCccee
Q 002189 311 MQSLTTLMMENTNLKGQ----IPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 311 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
+++|+.|+|+.|.|.+. ++..+..+++|+.|+|++|.|+.
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 45566666666655542 23333345666666666666654
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.61 E-value=1.8e-06 Score=97.03 Aligned_cols=294 Identities=9% Similarity=0.052 Sum_probs=132.5
Q ss_pred CCEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEE
Q 002189 64 SRVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLS 143 (955)
Q Consensus 64 ~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 143 (955)
.+++++.+.. +++.+-..+|.++.+|+.++|..+ ++.+-..+|.+. +|+.+.+..+ +...-..+|.. .+|+.+.
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~--v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~ 119 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST--VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFE 119 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT--CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEE
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc--ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccccc
Confidence 3566666653 566555567777777777777654 455555666665 5666655433 34233334443 3677777
Q ss_pred ccCCCCcCcCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCC-----------cccc
Q 002189 144 LNSNGFSGRVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIP-----------EKLF 212 (955)
Q Consensus 144 Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip-----------~~~~ 212 (955)
+..+- +......|.+. +|+.+.+..+--. .-...+ .....++.+.+..+....... ...+
T Consensus 120 lp~~~-~~i~~~~F~~~-~l~~~~~~~~v~~-i~~~~f------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (379)
T 4h09_A 120 FPGAT-TEIGNYIFYNS-SVKRIVIPKSVTT-IKDGIG------YKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESY 190 (379)
T ss_dssp CCTTC-CEECTTTTTTC-CCCEEEECTTCCE-ECSCTT------TTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEEC
T ss_pred CCCcc-ccccccccccc-eeeeeeccceeec-cccchh------cccccccccccccccceeecccceecccccceeccc
Confidence 76543 21333344432 4554444433111 111111 122222332322222110000 0001
Q ss_pred CCccceeeeeccCCCccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCE
Q 002189 213 RPDMVLIHVLFDSNNLTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSY 291 (955)
Q Consensus 213 ~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 291 (955)
.....+..+.+..+ ........+....+|+.+.+..+ +.......|.++.+|+.+.+..+ ++.+.. .+.++.+|+.
T Consensus 191 ~~~~~~~~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~ 267 (379)
T 4h09_A 191 PAAKTGTEFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKT 267 (379)
T ss_dssp CTTCCCSEEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCE
T ss_pred cccccccccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcc
Confidence 11111222222111 11123334455555555555443 22233445555666666666544 333333 3455555666
Q ss_pred EECcCCCCCCCCCChhhcCCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCc
Q 002189 292 LDMSNNSFDASEVPSWFSSMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNR 370 (955)
Q Consensus 292 L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~ 370 (955)
+.+..+ ++. .....|.++++|+.+.+.++.++..-...|.++.+|+.++|..+ ++.+....|. ..+|..+.+..+
T Consensus 268 i~l~~~-i~~-i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~- 343 (379)
T 4h09_A 268 LNFYAK-VKT-VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS- 343 (379)
T ss_dssp EEECCC-CSE-ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-
T ss_pred cccccc-cee-ccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-
Confidence 655443 221 23344555666666666555555444555555666666655433 4443333333 233444444332
Q ss_pred cccccCCCC
Q 002189 371 ISAYTERGG 379 (955)
Q Consensus 371 l~~~~~~~~ 379 (955)
++.+...+|
T Consensus 344 v~~I~~~aF 352 (379)
T 4h09_A 344 ITLIESGAF 352 (379)
T ss_dssp CCEECTTTT
T ss_pred cCEEchhHh
Confidence 444444444
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.56 E-value=2e-06 Score=96.68 Aligned_cols=287 Identities=10% Similarity=0.020 Sum_probs=191.4
Q ss_pred CcCCCCcccEEecCCCCCCccCCCCCcccccccccccccccccCCCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCC
Q 002189 83 DITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVGCSFSGPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSN 162 (955)
Q Consensus 83 ~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~ 162 (955)
.+....+|+.+.+..+ ++.+-..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-..+|.+ .+
T Consensus 41 ~~~~~~~i~~v~ip~~--vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG--ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TGGGGGGCSEEEECTT--EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred ccccccCCEEEEeCCC--ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 4566678999999764 67777788999999999999754 664556678776 6888887654 55344456655 58
Q ss_pred cCeeecCCceeeeccCCCCCCCCchhhhhccccccccCCcccccCCccccCCccceeeeeccCCCccc------------
Q 002189 163 LYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGKNQLSGSIPEKLFRPDMVLIHVLFDSNNLTG------------ 230 (955)
Q Consensus 163 L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~------------ 230 (955)
|+.+.+.++-.. .-...+.+. +|+.+.+. +.++ .+....|.....+..+.+..+....
T Consensus 115 L~~i~lp~~~~~-i~~~~F~~~-------~l~~~~~~-~~v~-~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (379)
T 4h09_A 115 LDDFEFPGATTE-IGNYIFYNS-------SVKRIVIP-KSVT-TIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNK 184 (379)
T ss_dssp CSEEECCTTCCE-ECTTTTTTC-------CCCEEEEC-TTCC-EECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTS
T ss_pred cccccCCCcccc-ccccccccc-------eeeeeecc-ceee-ccccchhcccccccccccccccceeecccceeccccc
Confidence 999988765332 111112211 22333332 2233 5556666666667666665544321
Q ss_pred cCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCCcCcccCC-CCCCCCCCCEEECcCCCCCCCCCChhhc
Q 002189 231 ELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNNKLTGAMP-NLTGLSVLSYLDMSNNSFDASEVPSWFS 309 (955)
Q Consensus 231 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~ 309 (955)
.....+.....+..+.+..+.-. .....+..+.+|+.+.+..+ ++.+.. .+.+..+|+.+.+..+ ++. .....|.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~-I~~~aF~ 260 (379)
T 4h09_A 185 TILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTS-IGSFLLQ 260 (379)
T ss_dssp SEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCE-ECTTTTT
T ss_pred ceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccE-eCccccc
Confidence 12233444555666655543332 44566777888888888655 444443 5778888999998776 432 4566788
Q ss_pred CCCCCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeeeCCCcc-hhhhhhhcccCCccccccCCCCCCCcceeEe
Q 002189 310 SMQSLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTLDLGTS-YSENLLVNLQNNRISAYTERGGAPAVNLTLI 388 (955)
Q Consensus 310 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~l~~L~L~~N~l~~~~~~~~~~~~~L~~l 388 (955)
++.+|+.+.+..+ +.......|..+++|+.+.+.+|.++...+..|. ..+|..++|..+ ++.+...+|.+..+|+.+
T Consensus 261 ~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 261 NCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp TCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred eeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 8889999988654 5556666788899999999998888887777765 467778888654 888888888888888777
Q ss_pred cCc
Q 002189 389 DNP 391 (955)
Q Consensus 389 ~n~ 391 (955)
..|
T Consensus 339 ~ip 341 (379)
T 4h09_A 339 SYP 341 (379)
T ss_dssp CCC
T ss_pred EEC
Confidence 665
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.54 E-value=5.2e-07 Score=97.36 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=62.3
Q ss_pred ccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCC---CcceEEEEEEeCCeEEEEEEecCC
Q 002189 632 DANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHK---NLVSLLGFCFDRGEQMLIYEFVPN 708 (955)
Q Consensus 632 ~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lV~e~~~~ 708 (955)
..+.||.|.++.||+++..+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45679999999999999888999999997544333346789999999999865 577888763 46899999999
Q ss_pred CCcc
Q 002189 709 GSLG 712 (955)
Q Consensus 709 gsL~ 712 (955)
+++.
T Consensus 95 ~~~~ 98 (288)
T 3d1u_A 95 RPPT 98 (288)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8764
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=6.6e-10 Score=117.65 Aligned_cols=145 Identities=17% Similarity=0.160 Sum_probs=84.1
Q ss_pred CCccEEeCCC--CEeEEEecC---CcCccccC-cCcCCCCcccEEecCCCCCCccCCC-CCccccccccc--cccccccc
Q 002189 55 NWEGIGCTNS--RVTSITLSG---MGLKGQLS-GDITGLTELHTLDLSNNKDLRGPLP-TTIGNLKKLSN--LMLVGCSF 125 (955)
Q Consensus 55 ~w~gv~C~~~--~v~~L~L~~---~~l~~~~~-~~l~~l~~L~~L~Ls~N~~l~~~~p-~~~~~l~~L~~--L~Ls~N~l 125 (955)
+|.|+.|+.. +|+.+...+ ..+.+.+. +.+..++. .|...+|. ..+.++ +.|...+.|.. ++++.|..
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~-~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDG-SQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEET-TTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccch-hccccCHHHcCCCcchhhcCccccCCHH
Confidence 6999999753 777766655 33334333 22222222 22233332 222221 12555556666 67777744
Q ss_pred C---CCCCCccccCCCCcEEEccCCCCcC--cCCCCCCCCCCcCeeecCCceeeeccCCCCCCCCchhhhhccccccccC
Q 002189 126 S---GPIPDSIGSLQELVLLSLNSNGFSG--RVPPSIGNLSNLYWLDLTDNKLEGEIPVSDGNSPGLDMLVRAKHFHFGK 200 (955)
Q Consensus 126 ~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~L~~L~~L~L~~N~l~g~ip~~~~~~~~l~~L~~L~~L~L~~ 200 (955)
. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+..+ +|+.|+|++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-----~~l~~l~~l-~L~~L~L~~ 229 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-----RELDKIKGL-KLEELWLDG 229 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-----GGGGGGTTS-CCSEEECTT
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-----hhhhhcccC-CcceEEccC
Confidence 3 2222223568899999999999997 4556777899999999999999832 112222222 566666666
Q ss_pred CcccccCC
Q 002189 201 NQLSGSIP 208 (955)
Q Consensus 201 N~l~g~ip 208 (955)
|.+.+.+|
T Consensus 230 Npl~~~~~ 237 (267)
T 3rw6_A 230 NSLCDTFR 237 (267)
T ss_dssp STTGGGCS
T ss_pred CcCccccC
Confidence 66654444
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.45 E-value=9e-07 Score=97.20 Aligned_cols=137 Identities=16% Similarity=0.208 Sum_probs=100.8
Q ss_pred CCCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccC----CCcceEEEEEEeCCeEEEEEE
Q 002189 629 NFSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHH----KNLVSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 629 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lV~e 704 (955)
.+...+.++.|....||+. |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5667788999999999998 667888876432 223568899999999876 123455554 56789999
Q ss_pred ecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccC-------------------------------------
Q 002189 705 FVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELAN------------------------------------- 747 (955)
Q Consensus 705 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~------------------------------------- 747 (955)
|+++.++.+... ..++..++..++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988864321 134566667777778887877774321
Q ss_pred -----------------------CCeeccCCCCccEEEcCCCceEEeeccccccc
Q 002189 748 -----------------------PPIIHRDIKSSNILLDERLNAKVADFGLSKSM 779 (955)
Q Consensus 748 -----------------------~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~ 779 (955)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999766799999988643
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=6.8e-08 Score=102.21 Aligned_cols=63 Identities=24% Similarity=0.262 Sum_probs=35.9
Q ss_pred CCCCCCcEEEcccCCCCC--CccccccCCCCCCEEEccCCcCcccCC--CCCCCCCCCEEECcCCCCC
Q 002189 237 GLVKSLEVVRFDRNSLSG--PVPSNLNNLTSVNDLYLSNNKLTGAMP--NLTGLSVLSYLDMSNNSFD 300 (955)
Q Consensus 237 ~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~ 300 (955)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++... .+..+ +|++|+|++|+++
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLC 233 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTG
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCc
Confidence 345667777777777765 334555566666666666666665411 22222 5555555555554
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.24 E-value=6.2e-06 Score=89.80 Aligned_cols=136 Identities=21% Similarity=0.226 Sum_probs=92.7
Q ss_pred cCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCC---CcceEEEEEE-eCCeEEEEEEecCC
Q 002189 633 ANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHK---NLVSLLGFCF-DRGEQMLIYEFVPN 708 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lV~e~~~~ 708 (955)
.+.++.|....||+. |+.++||+... ......+.+|.++|+.+.+. .+.+.+.++. ..+..++||||+++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356888988999988 56788887432 22346788999999999753 2556677664 34567899999998
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-------------------------------------------
Q 002189 709 GSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL------------------------------------------- 745 (955)
Q Consensus 709 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 745 (955)
..+.+.... .++...+..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 877652111 133444445555555555555532
Q ss_pred --------------cCCCeeccCCCCccEEEcC---CCc-eEEeecccccc
Q 002189 746 --------------ANPPIIHRDIKSSNILLDE---RLN-AKVADFGLSKS 778 (955)
Q Consensus 746 --------------~~~~ivHrDlk~~NIll~~---~~~-~kl~DFGla~~ 778 (955)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2334799999999999997 455 48999997754
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.20 E-value=1.1e-07 Score=95.60 Aligned_cols=119 Identities=17% Similarity=0.125 Sum_probs=74.2
Q ss_pred CCcccCCCCCCcEEEcccC-CCCC----CccccccCCCCCCEEEccCCcCcccCC-----CCCCCCCCCEEECcCCCCCC
Q 002189 232 LPATLGLVKSLEVVRFDRN-SLSG----PVPSNLNNLTSVNDLYLSNNKLTGAMP-----NLTGLSVLSYLDMSNNSFDA 301 (955)
Q Consensus 232 ~p~~l~~l~~L~~L~Ls~N-~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~~ 301 (955)
+...+...++|++|+|++| .|.. .+...+...++|++|+|++|.|..... .+...++|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445566677777777777 6652 234455666777777777777754321 23445667777777777743
Q ss_pred C---CCChhhcCCCCCCEEEC--cCCcceec----CCcCCCCCCCCcEEEeecCccee
Q 002189 302 S---EVPSWFSSMQSLTTLMM--ENTNLKGQ----IPADLFSIPHLQTVVMKTNELNG 350 (955)
Q Consensus 302 ~---~~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 350 (955)
. .+...+...+.|+.|+| ++|.|... +...+...++|+.|+|++|.+..
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 1 12344556667777777 66777743 33344455778888888887753
No 420
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.20 E-value=4.1e-06 Score=93.31 Aligned_cols=81 Identities=12% Similarity=0.069 Sum_probs=57.8
Q ss_pred Cee-eccCceEEEEEEeC-------CCcEEEEEEcccCC---cchhHHHHHHHHHHHhcc-C--CCcceEEEEEEeC---
Q 002189 634 NDV-GSGGYGKVYKGTLP-------NGQLIAIKRAQQGS---MQGGQEFKMEIELLSRVH-H--KNLVSLLGFCFDR--- 696 (955)
Q Consensus 634 ~~l-G~G~fg~Vy~~~~~-------~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~--- 696 (955)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+++++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 557 78888999998764 26788999865432 111245788999999885 3 3466788887655
Q ss_pred CeEEEEEEecCCCCcccc
Q 002189 697 GEQMLIYEFVPNGSLGDS 714 (955)
Q Consensus 697 ~~~~lV~e~~~~gsL~~~ 714 (955)
+..++||||+++..+.+.
T Consensus 106 g~~~~v~e~l~G~~l~~~ 123 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDV 123 (357)
T ss_dssp SSCEEEEECCCCBCCCBT
T ss_pred CCceEEEEecCCCChhhc
Confidence 356899999998877653
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.18 E-value=6.9e-06 Score=91.63 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=59.1
Q ss_pred CCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCC--cceEEEEEEeC-CeEEEEEEec
Q 002189 630 FSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKN--LVSLLGFCFDR-GEQMLIYEFV 706 (955)
Q Consensus 630 f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lV~e~~ 706 (955)
....+.++.|....+|+... +|+.+++|+.... ..+..|..+++.+.... +.++++++... +..|+||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34456789999999999876 5788999987532 35888999999986544 45777777664 6689999999
Q ss_pred CCCCcc
Q 002189 707 PNGSLG 712 (955)
Q Consensus 707 ~~gsL~ 712 (955)
++.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 987664
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.14 E-value=3.5e-07 Score=91.82 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=83.4
Q ss_pred CccceeeeeccCC-Ccccc----CCcccCCCCCCcEEEcccCCCCCC----ccccccCCCCCCEEEccCCcCcccC----
Q 002189 214 PDMVLIHVLFDSN-NLTGE----LPATLGLVKSLEVVRFDRNSLSGP----VPSNLNNLTSVNDLYLSNNKLTGAM---- 280 (955)
Q Consensus 214 ~~~~L~~L~L~~N-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~---- 280 (955)
....|++|+|++| ++... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|....
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 3455777777777 66642 455667788999999999998732 4555667788999999999998642
Q ss_pred -CCCCCCCCCCEEEC--cCCCCCCCC---CChhhcCCCCCCEEECcCCcce
Q 002189 281 -PNLTGLSVLSYLDM--SNNSFDASE---VPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 281 -~~~~~l~~L~~L~L--s~N~l~~~~---~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
..+...++|++|+| ++|.|.... +...+...++|++|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 24667788999999 889985411 2345566789999999999986
No 423
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.13 E-value=5.9e-06 Score=88.11 Aligned_cols=136 Identities=18% Similarity=0.155 Sum_probs=94.5
Q ss_pred CeeeccCce-EEEEEEeC-CCcEEEEEEcccCCcchhHHHHHHHHHHHhcc-CCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002189 634 NDVGSGGYG-KVYKGTLP-NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH-HKNLVSLLGFCFDRGEQMLIYEFVPNGS 710 (955)
Q Consensus 634 ~~lG~G~fg-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gs 710 (955)
+.+..|..| .||+.... ++..++||+-... ...++.+|.+.|+.+. +--+-++++++.+.+..++|||++++.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345566665 69988754 5678899986532 3457889999999885 3336688999999999999999999877
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------------
Q 002189 711 LGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHEL--------------------------------------------- 745 (955)
Q Consensus 711 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------------------- 745 (955)
+.+..... ......++.++++.|+.||..
T Consensus 107 ~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 107 AFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 65533211 112223444555555555532
Q ss_pred ----------cCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 746 ----------ANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 746 ----------~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
..+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112378999999999999887778999997653
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87 E-value=7.8e-05 Score=82.11 Aligned_cols=139 Identities=16% Similarity=0.209 Sum_probs=81.1
Q ss_pred CeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccC--CCcceEEE------EEEeCCeEEEEEEe
Q 002189 634 NDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHH--KNLVSLLG------FCFDRGEQMLIYEF 705 (955)
Q Consensus 634 ~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~------~~~~~~~~~lV~e~ 705 (955)
+.|+.|..+.||+....+| .+++|+.... ..++..|.++++.+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4466677889999987655 5899988752 2344556666666631 12333332 12346678999999
Q ss_pred cCCCCccc--------------ccCC----C--C-C-----CCCCHHHHH------------------------------
Q 002189 706 VPNGSLGD--------------SLSG----K--N-G-----IRLDWIRRL------------------------------ 729 (955)
Q Consensus 706 ~~~gsL~~--------------~l~~----~--~-~-----~~l~~~~~~------------------------------ 729 (955)
+++..+.. .+|. . . . ....|...+
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 99876531 0110 0 0 0 012332211
Q ss_pred -HHHHHHHHHHHHhhh----------ccCCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 730 -KIALGAARGLSYLHE----------LANPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 730 -~i~~~ia~gL~yLH~----------~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
.+...+.+++++|++ .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345666653 134569999999999999888889999999764
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.79 E-value=0.00016 Score=78.54 Aligned_cols=138 Identities=16% Similarity=0.195 Sum_probs=93.0
Q ss_pred ccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhcc---CCCcceEEEEEEeCCeEEEEEEecCC
Q 002189 632 DANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVH---HKNLVSLLGFCFDRGEQMLIYEFVPN 708 (955)
Q Consensus 632 ~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e~~~~ 708 (955)
..+.|+.|....+|+... +++.++||+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 456789999999999986 4678889986542 3467889999999884 35678899998888899999999998
Q ss_pred CCccc-----------ccCCCCC--------------------CCCCHHHHH-----HHHHH--------------HH-H
Q 002189 709 GSLGD-----------SLSGKNG--------------------IRLDWIRRL-----KIALG--------------AA-R 737 (955)
Q Consensus 709 gsL~~-----------~l~~~~~--------------------~~l~~~~~~-----~i~~~--------------ia-~ 737 (955)
..+.. .||.... ..-+|.... .-..+ +. +
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 86632 1111100 012454322 11111 11 1
Q ss_pred HHHHhhh-ccCCCeeccCCCCccEEEcCCCceEEeecc
Q 002189 738 GLSYLHE-LANPPIIHRDIKSSNILLDERLNAKVADFG 774 (955)
Q Consensus 738 gL~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DFG 774 (955)
....|.. ...+.++|+|+.+.|++++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1223321 2246699999999999999887 8899974
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.78 E-value=9.7e-05 Score=79.47 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=58.2
Q ss_pred CCccCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCC---CcceEEEEEEeCCeEEEEEEec
Q 002189 630 FSDANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHK---NLVSLLGFCFDRGEQMLIYEFV 706 (955)
Q Consensus 630 f~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lV~e~~ 706 (955)
....+.+|.|..+.||+.+..||+.|+||+...........|..|.+.|+.+.-. -+.+.+++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 3446778999999999999999999999987655444445788999999988421 244555542 347899999
Q ss_pred CCCCc
Q 002189 707 PNGSL 711 (955)
Q Consensus 707 ~~gsL 711 (955)
+.+..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87654
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.77 E-value=6e-05 Score=85.20 Aligned_cols=75 Identities=17% Similarity=0.164 Sum_probs=50.2
Q ss_pred cCeeeccCceEEEEEEeC-CCcEEEEEEcccCCc-------chhHHHHHHHHHHHhccC--CCcc-eEEEEEEeCCeEEE
Q 002189 633 ANDVGSGGYGKVYKGTLP-NGQLIAIKRAQQGSM-------QGGQEFKMEIELLSRVHH--KNLV-SLLGFCFDRGEQML 701 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~niv-~l~~~~~~~~~~~l 701 (955)
.+.||.|.++.||++... +++.++||....... .....+..|.++++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999754 468899997653211 123456789999988842 4444 55543 4556789
Q ss_pred EEEecCCC
Q 002189 702 IYEFVPNG 709 (955)
Q Consensus 702 V~e~~~~g 709 (955)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.44 E-value=0.00053 Score=74.81 Aligned_cols=158 Identities=11% Similarity=0.093 Sum_probs=91.4
Q ss_pred ccCHHHHHHHhcCCCc-----cCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCC--cceE
Q 002189 617 CFSFEEVKKYTNNFSD-----ANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKN--LVSL 689 (955)
Q Consensus 617 ~~~~~el~~~~~~f~~-----~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l 689 (955)
.++.+++......|.. .+.|+.|....+|+....+| .+++|+.... ....++..|+++++.+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4566777777777765 23466688889999987665 6889987652 12245677888888774222 2233
Q ss_pred EEE------EEeCCeEEEEEEecCCCCcccc--------------cCCC----CCC-----C-CCHHHHHHH--------
Q 002189 690 LGF------CFDRGEQMLIYEFVPNGSLGDS--------------LSGK----NGI-----R-LDWIRRLKI-------- 731 (955)
Q Consensus 690 ~~~------~~~~~~~~lV~e~~~~gsL~~~--------------l~~~----~~~-----~-l~~~~~~~i-------- 731 (955)
+.. ....+..++|++|+++..+... +|.. ... . ..|...+.-
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 1234567899999988665321 1100 000 0 123321110
Q ss_pred ----HHHHHHHHHHhhhc----cCCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 732 ----ALGAARGLSYLHEL----ANPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 732 ----~~~ia~gL~yLH~~----~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
...+.+.++++++. ....++|+|+.+.||+++++..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 01133445555432 13458999999999999987666899998764
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.38 E-value=2.6e-05 Score=76.56 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=26.1
Q ss_pred CEeEEEecCCcCccccCcCcCCCCcccEEecCCCCCCcc
Q 002189 65 RVTSITLSGMGLKGQLSGDITGLTELHTLDLSNNKDLRG 103 (955)
Q Consensus 65 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~ 103 (955)
++++|||+++.|+..--..+..+++|++|+|++|..++.
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD 100 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED 100 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH
Confidence 677777777777665555566777777777777753443
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.31 E-value=0.00046 Score=78.51 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=45.4
Q ss_pred cCeeeccCceEEEEEEeCCCcEEEEEEcccC------C-c--chhHHHHHHHHHHHh-ccCCCcceEEEEEEeCCeEEEE
Q 002189 633 ANDVGSGGYGKVYKGTLPNGQLIAIKRAQQG------S-M--QGGQEFKMEIELLSR-VHHKNLVSLLGFCFDRGEQMLI 702 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~------~-~--~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lV 702 (955)
.+.||.|..+.||++.. +++.++||..... . . .....+..|+..+.. ..+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 45789999999999965 5678999943211 1 0 122334444433322 2234566677665 5677999
Q ss_pred EEec-CC
Q 002189 703 YEFV-PN 708 (955)
Q Consensus 703 ~e~~-~~ 708 (955)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.21 E-value=6.5e-05 Score=73.71 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=19.3
Q ss_pred CCCEEECcCCc-ceecCCcCCCCCCCCcEEEeecCc
Q 002189 313 SLTTLMMENTN-LKGQIPADLFSIPHLQTVVMKTNE 347 (955)
Q Consensus 313 ~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 347 (955)
+|+.|+|++|. |+..--..+..+++|+.|+|++++
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 45555555553 554333445556666666666654
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.15 E-value=0.0049 Score=67.17 Aligned_cols=158 Identities=9% Similarity=0.070 Sum_probs=90.9
Q ss_pred ccCHHHHHHHhcCCCc-----cCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCC--cceE
Q 002189 617 CFSFEEVKKYTNNFSD-----ANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKN--LVSL 689 (955)
Q Consensus 617 ~~~~~el~~~~~~f~~-----~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l 689 (955)
..+.+++..+.+.|.. ...++ |....||+....+|+.+++|+...... ....+..|..+++.+.... +.++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecce
Confidence 3445555555554432 33566 778899998877787899999874322 3456778888888885222 3444
Q ss_pred EEE-----EEeCCeEEEEEEecCCCCcccc--------------cCC----CC---CCCCCHHHH----HHH--------
Q 002189 690 LGF-----CFDRGEQMLIYEFVPNGSLGDS--------------LSG----KN---GIRLDWIRR----LKI-------- 731 (955)
Q Consensus 690 ~~~-----~~~~~~~~lV~e~~~~gsL~~~--------------l~~----~~---~~~l~~~~~----~~i-------- 731 (955)
+.. ....+..++||||+++..+... +|. .. ....++... ..+
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 432 2234567889999987654310 110 00 011222211 000
Q ss_pred -------HHHHHHHHHHhhhc----cCCCeeccCCCCccEEEcCCCceEEeecccccc
Q 002189 732 -------ALGAARGLSYLHEL----ANPPIIHRDIKSSNILLDERLNAKVADFGLSKS 778 (955)
Q Consensus 732 -------~~~ia~gL~yLH~~----~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~ 778 (955)
...+.+.++.+... ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 00111122222221 234588999999999999 4 899999987653
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.97 E-value=0.0016 Score=74.03 Aligned_cols=74 Identities=14% Similarity=0.233 Sum_probs=50.8
Q ss_pred cCeeeccCceEEEEEEeCC--------CcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCc-ceEEEEEEeCCeEEEEE
Q 002189 633 ANDVGSGGYGKVYKGTLPN--------GQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNL-VSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~ 703 (955)
.+.|+.|....||++...+ ++.+++|+...... ...+.+|..+++.+...++ .++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 3567888889999998753 57899998743211 1456689999998854444 56776543 2 3899
Q ss_pred EecCCCCcc
Q 002189 704 EFVPNGSLG 712 (955)
Q Consensus 704 e~~~~gsL~ 712 (955)
||+++.++.
T Consensus 152 e~l~G~~l~ 160 (429)
T 1nw1_A 152 EYIPSRPLS 160 (429)
T ss_dssp CCCCEEECC
T ss_pred EEeCCcccC
Confidence 999865553
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.95 E-value=0.0027 Score=68.50 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=46.0
Q ss_pred cCeeeccCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCc-ceEEEEEEeCCeEEEEEEec-CCCC
Q 002189 633 ANDVGSGGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNL-VSLLGFCFDRGEQMLIYEFV-PNGS 710 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~-~~gs 710 (955)
.+.|+.|....+|+. +.+++|+...... ...+..+|+.+++.+....+ .+++++ +.+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 577899999999998 5588888764321 11224568888888753334 355543 344457899999 5545
Q ss_pred c
Q 002189 711 L 711 (955)
Q Consensus 711 L 711 (955)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.95 E-value=0.0011 Score=72.60 Aligned_cols=140 Identities=14% Similarity=0.130 Sum_probs=72.6
Q ss_pred CeeeccCceE-EEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccCC--CcceEEEEEEeCCeEEEEEEecCCCC
Q 002189 634 NDVGSGGYGK-VYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHK--NLVSLLGFCFDRGEQMLIYEFVPNGS 710 (955)
Q Consensus 634 ~~lG~G~fg~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~~~~~~lV~e~~~~gs 710 (955)
+.|+.|+... +|+....+|+.+++|....... .++..|+++++.+... .+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3465555444 6677654467788876544221 3355677888777422 3456776643333 78999997655
Q ss_pred cccccC---------------------CCC--CC-CCCHHHHH-------H-------------HHHHHHHHHHHhh---
Q 002189 711 LGDSLS---------------------GKN--GI-RLDWIRRL-------K-------------IALGAARGLSYLH--- 743 (955)
Q Consensus 711 L~~~l~---------------------~~~--~~-~l~~~~~~-------~-------------i~~~ia~gL~yLH--- 743 (955)
+.+++. ... .. .++..... . ....+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 533221 100 00 11111000 0 0001111222221
Q ss_pred hccCCCeeccCCCCccEEEcCC----CceEEeecccccc
Q 002189 744 ELANPPIIHRDIKSSNILLDER----LNAKVADFGLSKS 778 (955)
Q Consensus 744 ~~~~~~ivHrDlk~~NIll~~~----~~~kl~DFGla~~ 778 (955)
....+.++|+|+.+.||+++.+ ..+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123459999999999999875 6799999998764
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.84 E-value=0.00049 Score=68.76 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=40.0
Q ss_pred cccCCCCCCEEEccCCcCcccCC-----CCCCCCCCCEEECcCCCCCCC---CCChhhcCCCCCCEEECcCC---ccee-
Q 002189 259 NLNNLTSVNDLYLSNNKLTGAMP-----NLTGLSVLSYLDMSNNSFDAS---EVPSWFSSMQSLTTLMMENT---NLKG- 326 (955)
Q Consensus 259 ~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~Ls~N---~l~~- 326 (955)
.+..-+.|+.|+|++|.|..... .+..-+.|+.|+|++|.|... .+.+.+..-+.|+.|+|++| .+..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 33444444444444444443221 122334455555555554320 01112233344555665543 2221
Q ss_pred ---cCCcCCCCCCCCcEEEeecCcce
Q 002189 327 ---QIPADLFSIPHLQTVVMKTNELN 349 (955)
Q Consensus 327 ---~~p~~~~~l~~L~~L~Ls~N~l~ 349 (955)
.+...+..-+.|+.|+|+.|.+.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 23334444566777777766553
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.78 E-value=0.00015 Score=72.39 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=71.1
Q ss_pred ccceeeeeccCC-Cccc----cCCcccCCCCCCcEEEcccCCCCC----CccccccCCCCCCEEEccCCcCcccCC----
Q 002189 215 DMVLIHVLFDSN-NLTG----ELPATLGLVKSLEVVRFDRNSLSG----PVPSNLNNLTSVNDLYLSNNKLTGAMP---- 281 (955)
Q Consensus 215 ~~~L~~L~L~~N-~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~---- 281 (955)
...|++|+|++| +|.. .+..++..-+.|+.|+|++|.|.. .+...+...+.|+.|+|++|.|.....
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 455777888775 6653 245566677788888888888862 344555667778888888888865332
Q ss_pred -CCCCCCCCCEEECcCCC---CCC---CCCChhhcCCCCCCEEECcCCcce
Q 002189 282 -NLTGLSVLSYLDMSNNS---FDA---SEVPSWFSSMQSLTTLMMENTNLK 325 (955)
Q Consensus 282 -~~~~l~~L~~L~Ls~N~---l~~---~~~p~~~~~l~~L~~L~Ls~N~l~ 325 (955)
.+..-+.|++|+|++|. +.. ..+...+..-+.|+.|+++.|.+.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 35556668888887653 211 012334555677888888777654
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.69 E-value=0.0045 Score=68.90 Aligned_cols=139 Identities=18% Similarity=0.243 Sum_probs=81.4
Q ss_pred CeeeccCceEEEEEEeC--------CCcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCc-ceEEEEEEeCCeEEEEEE
Q 002189 634 NDVGSGGYGKVYKGTLP--------NGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNL-VSLLGFCFDRGEQMLIYE 704 (955)
Q Consensus 634 ~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e 704 (955)
+.|..|-...+|+.... +++.+++|+.... ......+.+|.++++.+.-..+ .++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45666777889999864 3578999986332 2234567789999998853333 466665532 28999
Q ss_pred ecCCCCcccc-c----------------CCCC---CCCCC--HHHHHHHHHHHHH-------------------HHHHhh
Q 002189 705 FVPNGSLGDS-L----------------SGKN---GIRLD--WIRRLKIALGAAR-------------------GLSYLH 743 (955)
Q Consensus 705 ~~~~gsL~~~-l----------------~~~~---~~~l~--~~~~~~i~~~ia~-------------------gL~yLH 743 (955)
|+++..|..- + |... ..... |.+..++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998666421 1 1110 11222 3344444433311 122332
Q ss_pred ----hc-cCCCeeccCCCCccEEEcCC----CceEEeeccccc
Q 002189 744 ----EL-ANPPIIHRDIKSSNILLDER----LNAKVADFGLSK 777 (955)
Q Consensus 744 ----~~-~~~~ivHrDlk~~NIll~~~----~~~kl~DFGla~ 777 (955)
.. ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 11 22358899999999999876 789999998775
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.61 E-value=0.01 Score=67.82 Aligned_cols=75 Identities=15% Similarity=0.006 Sum_probs=49.0
Q ss_pred cCeeeccCceEEEEEEeCC-CcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCc-ceEEEEEEeCCeEEEEEEecCCCC
Q 002189 633 ANDVGSGGYGKVYKGTLPN-GQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNL-VSLLGFCFDRGEQMLIYEFVPNGS 710 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~~~gs 710 (955)
.+.|+.|-...+|+....+ +..+++|+...... ..-+..+|..+++.+...++ .++++++ .+ .+||||+++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCcc
Confidence 3567888889999998765 57888988754321 11122579999999975555 4677665 22 35999998765
Q ss_pred cc
Q 002189 711 LG 712 (955)
Q Consensus 711 L~ 712 (955)
|.
T Consensus 188 l~ 189 (458)
T 2qg7_A 188 LS 189 (458)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.59 E-value=0.0043 Score=69.07 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=45.1
Q ss_pred CeeeccCceEEEEEEeCC---------CcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCc-ceEEEEEEeCCeEEEEE
Q 002189 634 NDVGSGGYGKVYKGTLPN---------GQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNL-VSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 634 ~~lG~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~ 703 (955)
+.|+.|....+|+....+ ++.+++|+..... ....+...|.++++.+...++ .++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457778888999998754 2688888875432 111234678888888854344 3666543 2 36899
Q ss_pred EecCCCCc
Q 002189 704 EFVPNGSL 711 (955)
Q Consensus 704 e~~~~gsL 711 (955)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987554
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.49 E-value=0.0085 Score=65.78 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=43.5
Q ss_pred cCceEEEEEEeCCCcEEEEEEcccCCcchhHHHHHHHHHHHhccC---CCcceEEEE------EEeCCeEEEEEEecCCC
Q 002189 639 GGYGKVYKGTLPNGQLIAIKRAQQGSMQGGQEFKMEIELLSRVHH---KNLVSLLGF------CFDRGEQMLIYEFVPNG 709 (955)
Q Consensus 639 G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~------~~~~~~~~lV~e~~~~g 709 (955)
|....||+....+| .+++|+...... ..|+++++.+.. |.+.+.+.. ....+..++||||+++.
T Consensus 34 g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~ 106 (339)
T 3i1a_A 34 DTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP 106 (339)
T ss_dssp CSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred ccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence 33579999987777 899998765432 346666666631 224444432 23356789999999987
Q ss_pred Cc
Q 002189 710 SL 711 (955)
Q Consensus 710 sL 711 (955)
.+
T Consensus 107 ~~ 108 (339)
T 3i1a_A 107 NG 108 (339)
T ss_dssp BT
T ss_pred cC
Confidence 66
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.04 E-value=0.011 Score=54.94 Aligned_cols=40 Identities=25% Similarity=0.311 Sum_probs=25.1
Q ss_pred CCCEEECcCCcceecCCcCCCCCCCCcEEEeecCcceeee
Q 002189 313 SLTTLMMENTNLKGQIPADLFSIPHLQTVVMKTNELNGTL 352 (955)
Q Consensus 313 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 352 (955)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|++...-
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 4556666666666444445566777777777777776543
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.03 E-value=0.0062 Score=56.66 Aligned_cols=56 Identities=16% Similarity=0.161 Sum_probs=35.1
Q ss_pred cccccccccC-CCCCCccccCCCCcEEEccCCCCcCcCCCCCCCCCCcCeeecCCceee
Q 002189 117 NLMLVGCSFS-GPIPDSIGSLQELVLLSLNSNGFSGRVPPSIGNLSNLYWLDLTDNKLE 174 (955)
Q Consensus 117 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~ 174 (955)
.++.++++++ ..+|..+. .+|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 23443322 25777777777777555556777777777777777765
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.41 E-value=0.051 Score=60.65 Aligned_cols=140 Identities=19% Similarity=0.217 Sum_probs=80.3
Q ss_pred CeeeccCceEEEEEEeCC--------CcEEEEEEcccCCc-----------chh-------HHHHHHHHHHHhccCCCc-
Q 002189 634 NDVGSGGYGKVYKGTLPN--------GQLIAIKRAQQGSM-----------QGG-------QEFKMEIELLSRVHHKNL- 686 (955)
Q Consensus 634 ~~lG~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~-----------~~~-------~~~~~E~~~l~~l~H~ni- 686 (955)
+.|..|--..+|+....+ ++.|.+++.-.... -++ +....|.++++.+...++
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778999998754 36788887643211 011 122358889888864444
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCcccc-c----------------CCCC---CCCCC--HHHHHHHHHHHH--------
Q 002189 687 VSLLGFCFDRGEQMLIYEFVPNGSLGDS-L----------------SGKN---GIRLD--WIRRLKIALGAA-------- 736 (955)
Q Consensus 687 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l----------------~~~~---~~~l~--~~~~~~i~~~ia-------- 736 (955)
.++++++.. .+|+||+++-+|... + |... ..... |.+..++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 467766532 289999997555321 1 1110 11222 223333332221
Q ss_pred --------------HHH----HHhhhc-cCCCeeccCCCCccEEEcCC------CceEEeeccccc
Q 002189 737 --------------RGL----SYLHEL-ANPPIIHRDIKSSNILLDER------LNAKVADFGLSK 777 (955)
Q Consensus 737 --------------~gL----~yLH~~-~~~~ivHrDlk~~NIll~~~------~~~kl~DFGla~ 777 (955)
+-+ ++|... ....++|+|+.+.||+++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223222 22347899999999999887 789999998765
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.42 E-value=0.17 Score=56.90 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=49.1
Q ss_pred cCeeeccCceEEEEEEeCC--------CcEEEEEEcccCCcchhHHHHHHHHHHHhccCCCc-ceEEEEEEeCCeEEEEE
Q 002189 633 ANDVGSGGYGKVYKGTLPN--------GQLIAIKRAQQGSMQGGQEFKMEIELLSRVHHKNL-VSLLGFCFDRGEQMLIY 703 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~ 703 (955)
.+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+.-.++ .++++.+ . -++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 3456667778999998753 5789999865432 111234678888888853333 4556533 2 37899
Q ss_pred EecCCCCcc
Q 002189 704 EFVPNGSLG 712 (955)
Q Consensus 704 e~~~~gsL~ 712 (955)
||+++..|.
T Consensus 150 efI~G~~l~ 158 (424)
T 3mes_A 150 EFIDGEPLT 158 (424)
T ss_dssp ECCCSEECC
T ss_pred EEeCCccCC
Confidence 999986653
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.08 E-value=0.028 Score=40.67 Aligned_cols=30 Identities=13% Similarity=0.114 Sum_probs=16.0
Q ss_pred eEEehhhHHHHHHHHHHHHHHHHhhhhcch
Q 002189 558 GVIIGAAAAGCVVLLLLLLAGVYAYHQKRR 587 (955)
Q Consensus 558 ~~ii~~~~~~~v~ll~l~~~~~~~~~~~~~ 587 (955)
+.|++++++|++++++++++.++++|+|+.
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 446666666666655555444444444433
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.90 E-value=0.023 Score=40.95 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=16.9
Q ss_pred eeEEehhhHHHHHHHHHHHHHHHHhhhhcchh
Q 002189 557 IGVIIGAAAAGCVVLLLLLLAGVYAYHQKRRA 588 (955)
Q Consensus 557 ~~~ii~~~~~~~v~ll~l~~~~~~~~~~~~~~ 588 (955)
.+.|++++++|+++++++++..++++|+|+++
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 34466666666666555554444444444333
No 448
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=93.76 E-value=0.33 Score=48.74 Aligned_cols=98 Identities=15% Similarity=0.113 Sum_probs=61.7
Q ss_pred CcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeecccccccCCCCCcceee
Q 002189 710 SLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSKSMSDSEKDHITT 789 (955)
Q Consensus 710 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~ 789 (955)
+|.+.|... +.++++.+.|.++.|.+++|.-+-....+ ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 34 SL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------------
Confidence 566666544 45899999999999999887665211111 1233456899999999988764 1110
Q ss_pred eeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHh
Q 002189 790 QVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLT 826 (955)
Q Consensus 790 ~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~ellt 826 (955)
.....+.|||... ...+.+.=|||+|+++|..+-
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0122356787653 345678889999999999885
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=90.81 E-value=0.12 Score=36.23 Aligned_cols=30 Identities=20% Similarity=0.071 Sum_probs=15.9
Q ss_pred cceeEEehhhHHHHHHHHHHHHHHHHhhhh
Q 002189 555 TSIGVIIGAAAAGCVVLLLLLLAGVYAYHQ 584 (955)
Q Consensus 555 ~~~~~ii~~~~~~~v~ll~l~~~~~~~~~~ 584 (955)
.+-+.|+|++++.++.+++++++.+|++||
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 344556666665555555555555554443
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.61 E-value=0.95 Score=50.52 Aligned_cols=29 Identities=34% Similarity=0.500 Sum_probs=24.6
Q ss_pred eeccCCCCccEEE------cCCCceEEeecccccc
Q 002189 750 IIHRDIKSSNILL------DERLNAKVADFGLSKS 778 (955)
Q Consensus 750 ivHrDlk~~NIll------~~~~~~kl~DFGla~~ 778 (955)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999988753
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=88.11 E-value=0.19 Score=36.17 Aligned_cols=17 Identities=18% Similarity=0.184 Sum_probs=6.7
Q ss_pred HHHHHHHHHHhhhhcch
Q 002189 571 LLLLLLAGVYAYHQKRR 587 (955)
Q Consensus 571 ll~l~~~~~~~~~~~~~ 587 (955)
+++++++.+++|.|||+
T Consensus 23 l~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhheehhh
Confidence 33333333344444333
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=79.46 E-value=0.54 Score=33.57 Aligned_cols=20 Identities=40% Similarity=0.496 Sum_probs=10.3
Q ss_pred eeEEehhhHHHHHHHHHHHH
Q 002189 557 IGVIIGAAAAGCVVLLLLLL 576 (955)
Q Consensus 557 ~~~ii~~~~~~~v~ll~l~~ 576 (955)
++.|++++++|+++++++++
T Consensus 12 ~~~I~~~vv~Gv~ll~~iv~ 31 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLLVLAG 31 (41)
T ss_dssp STHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHHHHHHHH
Confidence 34456666666665442333
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.40 E-value=0.25 Score=56.45 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=17.7
Q ss_pred cCeeeccCceEEEEEEeCC-CcEEEE------EEcccCCcc--hhHHHHHHHHHHHhccCCCcceEEEEEEe
Q 002189 633 ANDVGSGGYGKVYKGTLPN-GQLIAI------KRAQQGSMQ--GGQEFKMEIELLSRVHHKNLVSLLGFCFD 695 (955)
Q Consensus 633 ~~~lG~G~fg~Vy~~~~~~-g~~vav------K~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 695 (955)
.+.|| ||+||+|.+.. ..+||| |..+..... ....|.+|..+++..+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 35566 99999999854 367888 776653332 22468889999999999999999887654
No 454
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.32 E-value=12 Score=37.40 Aligned_cols=116 Identities=7% Similarity=0.040 Sum_probs=76.6
Q ss_pred cCCCcceEEEEEEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCeeccCCCCccEE
Q 002189 682 HHKNLVSLLGFCFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELANPPIIHRDIKSSNIL 761 (955)
Q Consensus 682 ~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NIl 761 (955)
.||+.+.. ..-.+.+...+.|+.-+ +...+-.- ..++...+++++..|+....+++. =+|--+.|.|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEE
Confidence 58988876 45555666555555433 33332221 146788999999999887766654 367889999999
Q ss_pred EcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCCc
Q 002189 762 LDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPIE 832 (955)
Q Consensus 762 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~~ 832 (955)
++.++.+++.=-|+-..+.+.. +.+|-+ .-.+=+++..+++++..|+
T Consensus 112 f~~~~~p~i~~RGik~~l~P~~--------------~~ee~f----------L~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVDPLP--------------VSEAEF----------LTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECTTSCEEESCCEETTTBSCCC--------------CCHHHH----------HHHHHHHHHHHHCTTCCHH
T ss_pred EcCCCCEEEEEccCccCCCCCC--------------CCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 9999999998777644332211 123322 3356678888999888874
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=64.48 E-value=17 Score=36.42 Aligned_cols=114 Identities=11% Similarity=0.125 Sum_probs=74.6
Q ss_pred cCCCcceEEEEEEeCCeEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHH-HhhhccCCCeeccCCCCccE
Q 002189 682 HHKNLVSLLGFCFDRGEQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLS-YLHELANPPIIHRDIKSSNI 760 (955)
Q Consensus 682 ~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrDlk~~NI 760 (955)
.||++ -...-.+++...+.|+.-+++-=...++ .++...+++++..++.... +++. -+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57887 3334456667666666543332222232 4678889999999888776 5554 47788999999
Q ss_pred EEcCCCceEEeecccccccCCCCCcceeeeeecCCCCCCHHHhhhCCCCChhhhHHHHHHHHHHHhCCCCC
Q 002189 761 LLDERLNAKVADFGLSKSMSDSEKDHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELLTGRRPI 831 (955)
Q Consensus 761 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDvwS~Gv~l~elltg~~P~ 831 (955)
++|.++.+++.=.|+-..+.+.. +.+|-+ .-.+=+++..++.++..|
T Consensus 116 ~f~~~~~p~i~hRGi~~~lpP~e--------------~~ee~f----------l~qyKali~all~~K~~F 162 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESLPPDE--------------WDDERL----------LREVKATVLALTEGEYRF 162 (219)
T ss_dssp EECTTCCEEESCCEETTTBSSCS--------------CCHHHH----------HHHHHHHHHHHTTCSSCH
T ss_pred EEeCCCcEEEEEcCCcccCCCCC--------------CCHHHH----------HHHHHHHHHHHHcCCCCH
Confidence 99999999998777644332111 233333 234667888888887776
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=64.22 E-value=3.8 Score=30.81 Aligned_cols=25 Identities=40% Similarity=0.458 Sum_probs=15.9
Q ss_pred cceeEEehhhHHHHHHHHHHHHHHH
Q 002189 555 TSIGVIIGAAAAGCVVLLLLLLAGV 579 (955)
Q Consensus 555 ~~~~~ii~~~~~~~v~ll~l~~~~~ 579 (955)
..+++|++++++|++++++++++.+
T Consensus 7 vp~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778777777776665554443
No 457
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=60.01 E-value=2.2 Score=28.98 Aligned_cols=24 Identities=33% Similarity=0.425 Sum_probs=9.4
Q ss_pred ehhhHHHHHHHHHHHHHHHHhhhhc
Q 002189 561 IGAAAAGCVVLLLLLLAGVYAYHQK 585 (955)
Q Consensus 561 i~~~~~~~v~ll~l~~~~~~~~~~~ 585 (955)
|++.+.| +++++++...+..|.||
T Consensus 10 IaagVvg-lll~vii~l~~~~~iRR 33 (35)
T 1iij_A 10 IIATVVG-VLLFLILVVVVGILIKR 33 (35)
T ss_dssp HHHHHHH-HHHHHHHTTTTTHHHHH
T ss_pred eHHHHHH-HHHHHHHHHHhheEEee
Confidence 3344444 33333333333344443
No 458
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=58.23 E-value=4.1 Score=31.69 Aligned_cols=16 Identities=31% Similarity=0.598 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 002189 565 AAGCVVLLLLLLAGVY 580 (955)
Q Consensus 565 ~~~~v~ll~l~~~~~~ 580 (955)
++|++.+++++.++++
T Consensus 14 lGg~~~lll~~glcI~ 29 (70)
T 2klu_A 14 LGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHH
Confidence 3344444444444444
No 459
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=48.44 E-value=12 Score=28.18 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=15.5
Q ss_pred cceeEEehhhHHHHHHHHHHHHHH
Q 002189 555 TSIGVIIGAAAAGCVVLLLLLLAG 578 (955)
Q Consensus 555 ~~~~~ii~~~~~~~v~ll~l~~~~ 578 (955)
..+++|++++++|++++.+++++.
T Consensus 10 vp~wiIi~svl~GLllL~li~~~L 33 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAM 33 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHH
Confidence 456777877777776665555443
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=41.40 E-value=14 Score=26.32 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=15.3
Q ss_pred cceeEEehhhHHHHHHHHHHHHHH
Q 002189 555 TSIGVIIGAAAAGCVVLLLLLLAG 578 (955)
Q Consensus 555 ~~~~~ii~~~~~~~v~ll~l~~~~ 578 (955)
...++|++++++|++++.+++++.
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~L 31 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAM 31 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHH
Confidence 445677777777776665555443
No 461
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=38.97 E-value=31 Score=21.64 Aligned_cols=20 Identities=35% Similarity=0.580 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHHHHhhh
Q 002189 564 AAAGCVVLLLLLLAGVYAYH 583 (955)
Q Consensus 564 ~~~~~v~ll~l~~~~~~~~~ 583 (955)
+++|.|.++..+++++|.+.
T Consensus 8 viaglvalltflafgfwlfk 27 (32)
T 2lx0_A 8 VIAGLVALLTFLAFGFWLFK 27 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45667777777777777654
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.60 E-value=52 Score=28.23 Aligned_cols=46 Identities=17% Similarity=0.206 Sum_probs=22.5
Q ss_pred cCccccCcCcCCCCcccEEecCCCCCCccCCCCCcccccccccccccc
Q 002189 75 GLKGQLSGDITGLTELHTLDLSNNKDLRGPLPTTIGNLKKLSNLMLVG 122 (955)
Q Consensus 75 ~l~~~~~~~l~~l~~L~~L~Ls~N~~l~~~~p~~~~~l~~L~~L~Ls~ 122 (955)
+++.+-...|.++++|+.+.|-.+ ++.+-...|.++.+|+.+.+.+
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~--v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN--IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT--SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc--hheEcHHHHhccCCccEEEEcC
Confidence 344444445555555555555543 3444444555555555555443
No 463
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=33.70 E-value=24 Score=25.41 Aligned_cols=32 Identities=22% Similarity=0.009 Sum_probs=15.1
Q ss_pred ceeEEehhhHHHHHHHHHHHHHHHHhhhhcch
Q 002189 556 SIGVIIGAAAAGCVVLLLLLLAGVYAYHQKRR 587 (955)
Q Consensus 556 ~~~~ii~~~~~~~v~ll~l~~~~~~~~~~~~~ 587 (955)
.++..+.+.+++++++++++++++...+++++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 34443444444444444555555555554443
No 464
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=39.12 E-value=9.2 Score=26.45 Aligned_cols=20 Identities=20% Similarity=0.409 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHhhhhcch
Q 002189 568 CVVLLLLLLAGVYAYHQKRR 587 (955)
Q Consensus 568 ~v~ll~l~~~~~~~~~~~~~ 587 (955)
.+++++.+++.++.|+||.|
T Consensus 18 ~vi~iisLIiLi~~w~qKPr 37 (39)
T 2l6w_A 18 VVLTIISLIILIMLWQKKPR 37 (39)
Confidence 33344444455556655543
No 465
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=30.31 E-value=19 Score=25.85 Aligned_cols=12 Identities=17% Similarity=-0.097 Sum_probs=4.7
Q ss_pred HHHHHHHHhhhh
Q 002189 573 LLLLAGVYAYHQ 584 (955)
Q Consensus 573 ~l~~~~~~~~~~ 584 (955)
+++++++..+++
T Consensus 28 ~~~~~~~RRRr~ 39 (44)
T 2l2t_A 28 LTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHhhhhhh
Confidence 333334443333
No 466
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=29.83 E-value=45 Score=23.95 Aligned_cols=21 Identities=19% Similarity=0.187 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHhhhhcchh
Q 002189 568 CVVLLLLLLAGVYAYHQKRRA 588 (955)
Q Consensus 568 ~v~ll~l~~~~~~~~~~~~~~ 588 (955)
+++++.+++++++.+++.+++
T Consensus 23 l~vi~~l~~~~~~RRR~~~~k 43 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHCSCCC
T ss_pred HHHHHHHHHHhheehhhhhcc
Confidence 566666666666666665543
No 467
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.32 E-value=59 Score=27.87 Aligned_cols=46 Identities=11% Similarity=0.120 Sum_probs=25.8
Q ss_pred ccccCCcccCCCCCCcEEEcccCCCCCCccccccCCCCCCEEEccCC
Q 002189 228 LTGELPATLGLVKSLEVVRFDRNSLSGPVPSNLNNLTSVNDLYLSNN 274 (955)
Q Consensus 228 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 274 (955)
++.+-..+|.++++|+.+.|..+ ++..-...|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 33344455666666666666553 33244556666666666666543
No 468
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=28.70 E-value=49 Score=25.81 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=18.5
Q ss_pred EehhhHHHHHHHHHHHHH-HHHhhhhcchhhhh
Q 002189 560 IIGAAAAGCVVLLLLLLA-GVYAYHQKRRAEKA 591 (955)
Q Consensus 560 ii~~~~~~~v~ll~l~~~-~~~~~~~~~~~~~~ 591 (955)
|+.+++++++++..+.++ ++-+++|+|+++..
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrqAeRM 44 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERM 44 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTTS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 445555666666666666 55456665555443
No 469
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=28.70 E-value=27 Score=28.67 Aligned_cols=17 Identities=12% Similarity=0.114 Sum_probs=7.8
Q ss_pred eEEehhhHHHHHHHHHH
Q 002189 558 GVIIGAAAAGCVVLLLL 574 (955)
Q Consensus 558 ~~ii~~~~~~~v~ll~l 574 (955)
+.|++++++|++++.++
T Consensus 11 ~~Iv~gvi~gilliGll 27 (79)
T 2knc_B 11 LVVLLSVMGAILLIGLA 27 (79)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 34455555554443333
No 470
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=27.34 E-value=1.5e+02 Score=31.45 Aligned_cols=79 Identities=19% Similarity=0.170 Sum_probs=42.5
Q ss_pred eEEEEEEecCCCCcccccCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCeec-cCCCCccEEEcCCCc-eEEeecc
Q 002189 698 EQMLIYEFVPNGSLGDSLSGKNGIRLDWIRRLKIALGAARGLSYLHELAN-PPIIH-RDIKSSNILLDERLN-AKVADFG 774 (955)
Q Consensus 698 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivH-rDlk~~NIll~~~~~-~kl~DFG 774 (955)
..+++|||+++..|.+.-+..-...+.......+ +-+-++.++...+. .+.+. .--.+.||++++++. +.++|-+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~L--G~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQL--GSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHH--HHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHHHHhh--chhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 4679999999766655432210011222222211 11224555544332 22222 225789999987655 8889999
Q ss_pred cccc
Q 002189 775 LSKS 778 (955)
Q Consensus 775 la~~ 778 (955)
++..
T Consensus 234 ~af~ 237 (342)
T 1cja_A 234 IIPL 237 (342)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8854
No 471
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=26.89 E-value=2.4e+02 Score=32.58 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=50.0
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCcccccCC----------CCC-----CCCCHHHHHHHHHHHH--HHHHHhhhccCCC
Q 002189 687 VSLLGFCFDRGEQMLIYEFVPNGSLGDSLSG----------KNG-----IRLDWIRRLKIALGAA--RGLSYLHELANPP 749 (955)
Q Consensus 687 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~----------~~~-----~~l~~~~~~~i~~~ia--~gL~yLH~~~~~~ 749 (955)
++.+.+.......-+ .|++++.++.+.+.. ... ....|..+..++...| ..+.|+=..
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 445555555555444 578876554443321 110 0123455556665544 345665332
Q ss_pred eeccCCCCccEEEcCCCceEEeeccccc
Q 002189 750 IIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 750 ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
+|=.++||||+.+|++.=+|||.+-
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999873
No 472
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=22.28 E-value=2.3e+02 Score=35.22 Aligned_cols=48 Identities=17% Similarity=0.043 Sum_probs=32.9
Q ss_pred CCHHH-HHHHHHHHH--HHHHHhhhccCCCeeccCCCCccEEEcCCCceEEeeccccc
Q 002189 723 LDWIR-RLKIALGAA--RGLSYLHELANPPIIHRDIKSSNILLDERLNAKVADFGLSK 777 (955)
Q Consensus 723 l~~~~-~~~i~~~ia--~gL~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFGla~ 777 (955)
..|.+ +..++...| ..+.|+=. =+|=.++|||||.+|++.=+|||.+-
T Consensus 911 ~~~~~ar~nF~~S~A~ysvv~YiLg-------igDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 911 EIYDAAIDLFTRSCAGYCVATFILG-------IGDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHHHHHHHhhhhhheEEEEe-------ecCCCCcceEEeCCCCEEEEeehhhh
Confidence 34543 334555443 34555532 35778999999999999999999874
No 473
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=21.05 E-value=75 Score=21.29 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=9.6
Q ss_pred EehhhHHHHHHHHHHHHHHHHhhh
Q 002189 560 IIGAAAAGCVVLLLLLLAGVYAYH 583 (955)
Q Consensus 560 ii~~~~~~~v~ll~l~~~~~~~~~ 583 (955)
++|++++.++ ..+++++.+|++.
T Consensus 9 IaGIVvgdi~-~t~~i~~~vy~~~ 31 (33)
T 2l34_A 9 LAGIVVGDLV-LTVLIALAVYFLG 31 (33)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHC
T ss_pred EEeEeHHHHH-HHHHHHHHHhhee
Confidence 3444444333 3334444444443
Done!