Query 002194
Match_columns 954
No_of_seqs 614 out of 4735
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 16:23:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 8.6E-56 2.9E-60 542.8 56.4 630 109-902 17-729 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 5.4E-54 1.8E-58 528.9 59.6 628 100-899 23-740 (741)
3 1xfd_A DIP, dipeptidyl aminope 100.0 2.4E-53 8E-58 521.8 44.3 630 110-899 18-722 (723)
4 1z68_A Fibroblast activation p 100.0 1.6E-51 5.5E-56 504.9 54.6 624 110-899 17-719 (719)
5 2z3z_A Dipeptidyl aminopeptida 100.0 6.3E-51 2.2E-55 498.6 58.6 569 190-898 83-706 (706)
6 3azo_A Aminopeptidase; POP fam 100.0 7.2E-49 2.5E-53 476.6 55.7 580 189-901 24-651 (662)
7 3o4h_A Acylamino-acid-releasin 100.0 5.5E-49 1.9E-53 469.7 48.0 538 190-900 23-581 (582)
8 2xdw_A Prolyl endopeptidase; a 100.0 2.7E-47 9.1E-52 465.5 59.6 584 191-900 76-706 (710)
9 2bkl_A Prolyl endopeptidase; m 100.0 3.7E-47 1.3E-51 462.8 58.6 581 194-901 73-678 (695)
10 3iuj_A Prolyl endopeptidase; h 100.0 3.8E-46 1.3E-50 452.5 60.1 576 195-901 83-687 (693)
11 1yr2_A Prolyl oligopeptidase; 100.0 7.1E-46 2.4E-50 454.6 56.2 580 195-902 113-721 (741)
12 2xe4_A Oligopeptidase B; hydro 100.0 3.6E-43 1.2E-47 428.5 56.1 572 190-900 118-743 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 7.5E-35 2.6E-39 345.7 51.9 321 551-900 371-708 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 2.8E-23 9.7E-28 233.7 31.0 344 177-620 21-386 (388)
15 3pe7_A Oligogalacturonate lyas 99.9 1.9E-23 6.4E-28 235.2 25.5 329 111-563 38-386 (388)
16 4a5s_A Dipeptidyl peptidase 4 99.9 2.4E-23 8.4E-28 254.8 28.6 349 113-571 66-459 (740)
17 1xfd_A DIP, dipeptidyl aminope 99.9 2.7E-22 9.2E-27 245.6 31.4 337 110-529 62-429 (723)
18 1k32_A Tricorn protease; prote 99.9 7.3E-22 2.5E-26 251.2 34.6 392 108-627 14-470 (1045)
19 3f67_A Putative dienelactone h 99.9 4.4E-22 1.5E-26 207.7 22.6 221 637-897 4-241 (241)
20 3hxk_A Sugar hydrolase; alpha- 99.9 4E-22 1.4E-26 212.9 22.4 237 642-901 17-269 (276)
21 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 8.8E-22 3E-26 221.3 24.8 231 637-901 125-367 (386)
22 2ecf_A Dipeptidyl peptidase IV 99.9 4.9E-21 1.7E-25 235.1 33.1 331 190-626 38-423 (741)
23 4ao6_A Esterase; hydrolase, th 99.9 7.5E-22 2.5E-26 208.3 21.7 230 617-899 9-259 (259)
24 1z68_A Fibroblast activation p 99.9 1.2E-21 4.1E-26 239.6 26.7 349 110-571 61-453 (719)
25 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.5E-21 1.2E-25 218.4 28.4 256 199-573 142-399 (415)
26 3c5m_A Oligogalacturonate lyas 99.9 5.6E-21 1.9E-25 215.4 29.5 326 191-625 38-391 (396)
27 3c5m_A Oligogalacturonate lyas 99.9 4.6E-21 1.6E-25 216.1 28.5 325 111-568 38-391 (396)
28 3ebl_A Gibberellin receptor GI 99.9 3.1E-21 1E-25 214.1 25.6 244 635-902 60-355 (365)
29 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-20 4.3E-25 230.0 33.5 336 109-568 82-442 (706)
30 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.1E-21 2.8E-25 215.4 29.5 249 163-521 159-409 (415)
31 3bxp_A Putative lipase/esteras 99.9 2.5E-21 8.5E-26 206.9 22.1 237 637-898 2-271 (277)
32 1k32_A Tricorn protease; prote 99.9 1.2E-20 4E-25 240.0 31.3 273 190-604 205-492 (1045)
33 2i3d_A AGR_C_3351P, hypothetic 99.9 1.6E-20 5.4E-25 197.2 26.7 213 638-900 20-235 (249)
34 1vlq_A Acetyl xylan esterase; 99.9 5.3E-21 1.8E-25 210.8 19.6 236 634-899 63-335 (337)
35 3o4h_A Acylamino-acid-releasin 99.9 9.7E-21 3.3E-25 225.4 22.7 295 101-567 15-320 (582)
36 3ksr_A Putative serine hydrola 99.9 6.5E-21 2.2E-25 205.1 19.1 232 638-902 5-245 (290)
37 3k2i_A Acyl-coenzyme A thioest 99.9 1.3E-20 4.5E-25 214.1 22.6 221 651-901 144-414 (422)
38 3doh_A Esterase; alpha-beta hy 99.9 1.5E-20 5.2E-25 210.4 22.7 226 638-897 143-378 (380)
39 3ga7_A Acetyl esterase; phosph 99.9 3.4E-20 1.1E-24 203.2 24.7 233 637-900 61-324 (326)
40 3hlk_A Acyl-coenzyme A thioest 99.9 1E-20 3.5E-25 216.0 20.6 221 651-901 160-430 (446)
41 3fak_A Esterase/lipase, ESTE5; 99.9 1.2E-20 4.2E-25 206.0 19.5 221 651-902 66-312 (322)
42 1zi8_A Carboxymethylenebutenol 99.8 1.2E-20 3.9E-25 196.2 18.2 207 640-900 4-234 (236)
43 3fcy_A Xylan esterase 1; alpha 99.8 1.5E-20 5.1E-25 208.0 19.3 230 635-896 78-343 (346)
44 3i6y_A Esterase APC40077; lipa 99.8 5.7E-21 2E-25 204.4 15.3 239 638-899 16-279 (280)
45 1l7a_A Cephalosporin C deacety 99.8 2.5E-20 8.5E-25 203.2 20.6 230 636-899 53-317 (318)
46 3bjr_A Putative carboxylestera 99.8 4.7E-21 1.6E-25 205.5 14.2 239 635-897 15-282 (283)
47 3fcx_A FGH, esterase D, S-form 99.8 5.9E-21 2E-25 204.5 14.9 241 639-899 16-281 (282)
48 3ls2_A S-formylglutathione hyd 99.8 1.7E-20 5.7E-25 200.8 17.1 239 638-899 14-279 (280)
49 3trd_A Alpha/beta hydrolase; c 99.8 8.1E-20 2.8E-24 185.9 21.3 203 638-894 5-207 (208)
50 2o2g_A Dienelactone hydrolase; 99.8 1.2E-19 4E-24 186.5 22.5 208 637-899 10-223 (223)
51 2wtm_A EST1E; hydrolase; 1.60A 99.8 1.6E-19 5.5E-24 189.8 23.1 227 642-899 4-250 (251)
52 3e4d_A Esterase D; S-formylglu 99.8 2.3E-20 8E-25 199.4 16.2 236 638-899 14-278 (278)
53 2fuk_A XC6422 protein; A/B hyd 99.8 2.3E-19 8E-24 184.1 22.3 211 637-900 8-218 (220)
54 2ojh_A Uncharacterized protein 99.8 1.2E-18 4.2E-23 186.9 28.8 259 163-529 22-291 (297)
55 2hdw_A Hypothetical protein PA 99.8 2.1E-19 7.3E-24 200.4 23.1 236 635-898 64-367 (367)
56 2gop_A Trilobed protease; beta 99.8 3.2E-19 1.1E-23 197.2 23.9 330 101-572 7-341 (347)
57 3qh4_A Esterase LIPW; structur 99.8 4.7E-20 1.6E-24 200.8 16.8 231 635-899 56-316 (317)
58 1mpx_A Alpha-amino acid ester 99.8 1.1E-19 3.8E-24 215.1 21.2 248 637-901 23-357 (615)
59 2o7r_A CXE carboxylesterase; a 99.8 1.3E-19 4.3E-24 199.8 18.1 278 595-899 7-332 (338)
60 2xdw_A Prolyl endopeptidase; a 99.8 5.6E-18 1.9E-22 206.3 34.1 333 101-570 66-425 (710)
61 2b9v_A Alpha-amino acid ester 99.8 2.3E-19 7.8E-24 213.0 21.1 251 637-901 35-369 (652)
62 2ymu_A WD-40 repeat protein; u 99.8 6.7E-18 2.3E-22 200.5 33.9 345 110-615 223-577 (577)
63 4fbl_A LIPS lipolytic enzyme; 99.8 4E-19 1.4E-23 190.1 20.8 202 670-897 51-281 (281)
64 2hm7_A Carboxylesterase; alpha 99.8 3.6E-19 1.2E-23 193.6 20.7 233 636-898 45-309 (310)
65 3ain_A 303AA long hypothetical 99.8 9.8E-19 3.4E-23 190.7 24.1 234 635-899 61-321 (323)
66 3azo_A Aminopeptidase; POP fam 99.8 2.2E-18 7.6E-23 208.4 29.4 317 109-571 24-379 (662)
67 2zsh_A Probable gibberellin re 99.8 1.2E-18 4.2E-23 192.8 24.2 238 635-896 68-350 (351)
68 1lzl_A Heroin esterase; alpha/ 99.8 6E-19 2E-23 193.0 21.2 237 635-900 47-318 (323)
69 2wir_A Pesta, alpha/beta hydro 99.8 2.8E-19 9.6E-24 194.7 17.7 233 637-899 49-312 (313)
70 2bkl_A Prolyl endopeptidase; m 99.8 7.9E-18 2.7E-22 204.4 31.4 330 100-571 61-407 (695)
71 3k6k_A Esterase/lipase; alpha/ 99.8 8.2E-19 2.8E-23 191.6 20.5 230 637-902 58-312 (322)
72 3h04_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 181.2 25.0 225 639-899 3-274 (275)
73 4b6g_A Putative esterase; hydr 99.8 8E-20 2.7E-24 195.9 11.7 236 639-898 22-282 (283)
74 4e15_A Kynurenine formamidase; 99.8 4.8E-20 1.6E-24 199.7 9.6 209 639-876 58-280 (303)
75 2ymu_A WD-40 repeat protein; u 99.8 4.7E-17 1.6E-21 193.3 36.4 355 110-625 182-546 (577)
76 2c7b_A Carboxylesterase, ESTE1 99.8 6.7E-19 2.3E-23 191.5 18.1 232 637-899 46-309 (311)
77 2gop_A Trilobed protease; beta 99.8 1E-17 3.5E-22 185.0 28.0 306 190-631 16-343 (347)
78 1jjf_A Xylanase Z, endo-1,4-be 99.8 6.8E-18 2.3E-22 179.2 25.1 221 636-898 29-261 (268)
79 3pfb_A Cinnamoyl esterase; alp 99.8 3.5E-18 1.2E-22 181.3 22.6 227 639-897 22-267 (270)
80 3hju_A Monoglyceride lipase; a 99.8 5E-18 1.7E-22 187.2 24.3 233 639-901 34-315 (342)
81 2uz0_A Esterase, tributyrin es 99.8 1.5E-18 5.2E-23 183.5 19.2 240 637-900 5-258 (263)
82 1jfr_A Lipase; serine hydrolas 99.8 4E-18 1.4E-22 180.3 22.0 205 637-901 23-234 (262)
83 1jkm_A Brefeldin A esterase; s 99.8 1.8E-18 6.3E-23 192.0 19.0 238 636-898 79-358 (361)
84 2ojh_A Uncharacterized protein 99.8 2.9E-17 9.7E-22 176.1 27.2 270 216-605 19-293 (297)
85 1lns_A X-prolyl dipeptidyl ami 99.8 2.5E-18 8.5E-23 207.0 20.1 246 645-902 179-525 (763)
86 3vis_A Esterase; alpha/beta-hy 99.8 3.5E-18 1.2E-22 185.2 18.5 193 647-901 79-278 (306)
87 1auo_A Carboxylesterase; hydro 99.8 1.7E-17 5.7E-22 169.8 22.6 186 668-898 12-217 (218)
88 3pe6_A Monoglyceride lipase; a 99.8 2.6E-17 8.9E-22 177.2 25.1 228 643-900 21-296 (303)
89 1gxr_A ESG1, transducin-like e 99.8 1.8E-16 6.1E-21 173.7 31.6 301 110-528 11-325 (337)
90 1ufo_A Hypothetical protein TT 99.8 2.7E-17 9.2E-22 170.5 23.7 214 644-899 7-236 (238)
91 4fhz_A Phospholipase/carboxyle 99.8 6.9E-18 2.4E-22 178.9 19.2 198 653-899 53-267 (285)
92 4h0c_A Phospholipase/carboxyle 99.8 6.4E-18 2.2E-22 171.3 18.0 184 669-895 21-209 (210)
93 1k8q_A Triacylglycerol lipase, 99.8 2.8E-17 9.5E-22 183.6 24.1 240 637-897 25-377 (377)
94 3fnb_A Acylaminoacyl peptidase 99.8 8.5E-18 2.9E-22 189.8 19.9 233 637-900 133-403 (405)
95 2pbl_A Putative esterase/lipas 99.8 4.9E-18 1.7E-22 179.6 16.8 201 640-878 39-245 (262)
96 3og9_A Protein YAHD A copper i 99.8 4.2E-17 1.4E-21 165.9 23.1 180 669-897 16-208 (209)
97 3llc_A Putative hydrolase; str 99.8 2.7E-17 9.2E-22 174.1 22.1 227 638-896 10-268 (270)
98 1l0q_A Surface layer protein; 99.8 1.9E-15 6.4E-20 169.8 38.5 357 163-661 12-386 (391)
99 1jji_A Carboxylesterase; alpha 99.8 3.7E-18 1.3E-22 185.4 15.1 226 638-896 55-310 (311)
100 1fj2_A Protein (acyl protein t 99.8 3E-17 1E-21 169.7 21.3 198 656-900 14-230 (232)
101 1yr2_A Prolyl oligopeptidase; 99.8 8.6E-17 2.9E-21 196.6 28.7 330 101-569 101-449 (741)
102 3mve_A FRSA, UPF0255 protein V 99.7 5.9E-18 2E-22 190.7 15.6 228 637-899 166-414 (415)
103 3ow8_A WD repeat-containing pr 99.7 5.1E-16 1.7E-20 169.4 30.0 268 110-528 34-309 (321)
104 3dkr_A Esterase D; alpha beta 99.7 4.4E-17 1.5E-21 170.3 20.1 203 670-897 22-248 (251)
105 1nr0_A Actin interacting prote 99.7 5.5E-16 1.9E-20 185.2 32.0 408 110-616 105-609 (611)
106 1nr0_A Actin interacting prote 99.7 1.1E-15 3.7E-20 182.6 34.0 329 110-624 20-361 (611)
107 3cn9_A Carboxylesterase; alpha 99.7 1.8E-16 6.2E-21 163.3 23.6 185 668-898 22-226 (226)
108 3d0k_A Putative poly(3-hydroxy 99.7 2.1E-17 7.1E-22 179.0 17.0 228 639-898 24-288 (304)
109 2h1i_A Carboxylesterase; struc 99.7 1.3E-16 4.4E-21 164.4 22.0 181 669-898 37-226 (226)
110 3u0v_A Lysophospholipase-like 99.7 1.3E-16 4.4E-21 165.9 21.8 189 669-900 22-233 (239)
111 3d7r_A Esterase; alpha/beta fo 99.7 5.4E-17 1.8E-21 177.5 19.6 216 652-899 84-323 (326)
112 1vkh_A Putative serine hydrola 99.7 6.2E-18 2.1E-22 180.0 11.2 200 668-894 39-272 (273)
113 3bdi_A Uncharacterized protein 99.7 2.6E-16 8.9E-21 159.4 21.6 197 639-896 4-206 (207)
114 3i2k_A Cocaine esterase; alpha 99.7 4E-17 1.4E-21 191.7 17.3 237 639-902 9-326 (587)
115 3b5e_A MLL8374 protein; NP_108 99.7 2.6E-16 8.9E-21 161.8 21.0 196 648-898 14-217 (223)
116 3rm3_A MGLP, thermostable mono 99.7 3.4E-16 1.2E-20 165.9 22.4 202 670-898 40-269 (270)
117 3iuj_A Prolyl endopeptidase; h 99.7 1.6E-15 5.5E-20 183.6 31.1 273 190-571 130-415 (693)
118 1sfr_A Antigen 85-A; alpha/bet 99.7 1.8E-16 6.2E-21 171.3 20.3 238 638-900 8-285 (304)
119 3zwl_B Eukaryotic translation 99.7 1.6E-15 5.5E-20 168.3 28.7 287 110-563 34-348 (369)
120 2r8b_A AGR_C_4453P, uncharacte 99.7 2.2E-16 7.6E-21 165.6 20.4 180 669-899 61-249 (251)
121 3fm0_A Protein CIAO1; WDR39,SG 99.7 1.7E-15 5.7E-20 167.2 28.1 289 110-563 18-337 (345)
122 1gkl_A Endo-1,4-beta-xylanase 99.7 8.8E-16 3E-20 164.9 25.0 208 637-877 39-272 (297)
123 1r5m_A SIR4-interacting protei 99.7 2.4E-15 8.3E-20 170.4 29.8 282 109-563 46-363 (425)
124 3vgz_A Uncharacterized protein 99.7 1E-14 3.5E-19 161.0 33.4 275 191-604 43-334 (353)
125 4ezi_A Uncharacterized protein 99.7 1.1E-15 3.8E-20 168.4 24.5 243 637-900 41-372 (377)
126 4f0j_A Probable hydrolytic enz 99.7 6E-16 2.1E-20 167.7 22.2 227 638-896 19-313 (315)
127 4g56_B MGC81050 protein; prote 99.7 5.1E-16 1.8E-20 172.1 22.0 284 110-528 44-331 (357)
128 1l0q_A Surface layer protein; 99.7 2.6E-15 8.8E-20 168.7 28.0 241 111-491 34-276 (391)
129 1r88_A MPT51/MPB51 antigen; AL 99.7 2.8E-16 9.6E-21 167.5 19.0 237 636-899 8-274 (280)
130 3vl1_A 26S proteasome regulato 99.7 5.3E-15 1.8E-19 167.8 30.9 278 111-528 59-353 (420)
131 2qm0_A BES; alpha-beta structu 99.7 9.2E-17 3.1E-21 170.9 14.5 225 637-894 16-272 (275)
132 3u4y_A Uncharacterized protein 99.7 1.3E-14 4.4E-19 158.8 31.9 276 163-567 20-310 (331)
133 3vgz_A Uncharacterized protein 99.7 7.1E-15 2.4E-19 162.3 29.6 283 110-529 42-333 (353)
134 3iii_A COCE/NOND family hydrol 99.7 1.1E-16 3.8E-21 185.0 15.6 248 637-902 39-324 (560)
135 2qru_A Uncharacterized protein 99.7 1.1E-15 3.7E-20 162.6 21.9 218 644-896 9-273 (274)
136 3nuz_A Putative acetyl xylan e 99.7 1.5E-16 5.2E-21 178.5 15.9 222 634-871 87-346 (398)
137 1tht_A Thioesterase; 2.10A {Vi 99.7 1.8E-15 6.2E-20 163.2 23.1 229 639-897 7-264 (305)
138 2pm9_A Protein WEB1, protein t 99.7 1.1E-15 3.9E-20 173.0 22.0 306 106-564 10-340 (416)
139 3bws_A Protein LP49; two-domai 99.7 1.8E-14 6.2E-19 164.2 32.1 306 188-617 122-431 (433)
140 1got_B GT-beta; complex (GTP-b 99.7 1E-14 3.4E-19 160.6 28.5 263 110-528 57-331 (340)
141 3g8y_A SUSD/RAGB-associated es 99.7 3.7E-16 1.3E-20 175.0 17.1 153 635-795 83-260 (391)
142 1qlw_A Esterase; anisotropic r 99.7 8.4E-16 2.9E-20 168.0 19.4 127 743-899 186-322 (328)
143 3ia2_A Arylesterase; alpha-bet 99.7 2.3E-15 7.8E-20 159.7 21.6 213 643-895 2-270 (271)
144 2fx5_A Lipase; alpha-beta hydr 99.7 8.3E-16 2.8E-20 162.0 17.7 187 654-900 34-230 (258)
145 2qjw_A Uncharacterized protein 99.7 8.8E-16 3E-20 151.2 16.8 172 670-896 4-175 (176)
146 3u4y_A Uncharacterized protein 99.7 3.2E-14 1.1E-18 155.6 31.0 297 193-622 2-308 (331)
147 4gqb_B Methylosome protein 50; 99.7 3.6E-15 1.2E-19 164.1 23.2 231 190-528 84-318 (344)
148 4h5i_A Guanine nucleotide-exch 99.7 4.6E-15 1.6E-19 164.9 23.8 203 190-489 135-344 (365)
149 3hfq_A Uncharacterized protein 99.7 9.9E-15 3.4E-19 161.1 26.2 284 164-569 17-327 (347)
150 3sfz_A APAF-1, apoptotic pepti 99.7 1E-14 3.4E-19 189.7 30.4 378 110-621 800-1210(1249)
151 4g56_B MGC81050 protein; prote 99.7 1.5E-14 5.1E-19 160.3 27.3 289 189-618 43-343 (357)
152 3d59_A Platelet-activating fac 99.7 2.1E-15 7E-20 168.9 20.4 186 668-901 96-353 (383)
153 1a88_A Chloroperoxidase L; hal 99.7 5.4E-15 1.8E-19 157.2 22.3 214 644-895 3-274 (275)
154 1erj_A Transcriptional repress 99.7 2.8E-14 9.7E-19 160.4 29.2 239 190-528 125-377 (393)
155 2j04_A TAU60, YPL007P, hypothe 99.7 3.6E-16 1.2E-20 176.6 13.3 269 110-527 17-310 (588)
156 3mkq_A Coatomer beta'-subunit; 99.7 2.4E-14 8.1E-19 177.5 31.0 262 110-523 15-284 (814)
157 3scy_A Hypothetical bacterial 99.7 2.6E-14 9E-19 158.6 28.3 284 163-568 27-346 (361)
158 4f21_A Carboxylesterase/phosph 99.7 3.7E-15 1.3E-19 154.6 19.7 129 743-899 117-245 (246)
159 1zoi_A Esterase; alpha/beta hy 99.6 5.2E-15 1.8E-19 157.5 21.3 214 644-895 4-275 (276)
160 1vyh_C Platelet-activating fac 99.6 2.2E-14 7.7E-19 162.2 27.8 279 110-528 110-399 (410)
161 1gxr_A ESG1, transducin-like e 99.6 1.7E-14 5.7E-19 157.9 25.5 267 110-486 53-335 (337)
162 3bws_A Protein LP49; two-domai 99.6 4.1E-14 1.4E-18 161.2 29.7 258 164-528 145-419 (433)
163 3vdx_A Designed 16NM tetrahedr 99.6 1E-14 3.6E-19 166.7 24.7 223 638-900 2-282 (456)
164 1pby_B Quinohemoprotein amine 99.6 9.6E-14 3.3E-18 151.9 31.5 290 163-569 11-318 (337)
165 3sfz_A APAF-1, apoptotic pepti 99.6 5.4E-14 1.9E-18 182.8 34.6 278 110-528 617-901 (1249)
166 3ow8_A WD repeat-containing pr 99.6 9.7E-15 3.3E-19 159.2 23.2 234 110-486 82-319 (321)
167 1dqz_A 85C, protein (antigen 8 99.6 4.7E-15 1.6E-19 158.2 19.5 235 638-899 5-279 (280)
168 2y6u_A Peroxisomal membrane pr 99.6 9.1E-16 3.1E-20 173.0 14.7 234 644-902 25-349 (398)
169 3zwl_B Eukaryotic translation 99.6 4.4E-14 1.5E-18 156.6 28.1 317 179-619 25-347 (369)
170 1a8s_A Chloroperoxidase F; hal 99.6 8.4E-15 2.9E-19 155.5 21.1 212 644-895 3-272 (273)
171 4aez_A CDC20, WD repeat-contai 99.6 4.5E-14 1.5E-18 159.3 28.3 267 163-565 113-384 (401)
172 1tqh_A Carboxylesterase precur 99.6 5.3E-15 1.8E-19 154.7 19.1 200 670-896 16-244 (247)
173 2xzm_R RACK1; ribosome, transl 99.6 8.4E-14 2.9E-18 153.4 29.8 270 110-528 23-328 (343)
174 1ri6_A Putative isomerase YBHE 99.6 1.6E-13 5.3E-18 150.6 31.6 264 163-528 15-295 (343)
175 4gqb_B Methylosome protein 50; 99.6 8.6E-14 3E-18 153.0 29.2 289 190-619 32-332 (344)
176 1imj_A CIB, CCG1-interacting f 99.6 3.6E-16 1.2E-20 158.9 9.2 190 647-896 14-208 (210)
177 3frx_A Guanine nucleotide-bind 99.6 4.9E-14 1.7E-18 153.5 26.8 273 110-528 19-305 (319)
178 1r5m_A SIR4-interacting protei 99.6 1.9E-14 6.4E-19 163.1 24.4 268 110-528 110-413 (425)
179 3fob_A Bromoperoxidase; struct 99.6 1.6E-14 5.6E-19 154.1 22.4 210 645-895 12-280 (281)
180 4fle_A Esterase; structural ge 99.6 1.1E-15 3.9E-20 154.3 12.6 183 670-895 2-190 (202)
181 3s25_A Hypothetical 7-bladed b 99.6 2.8E-14 9.7E-19 152.2 24.0 281 194-625 19-300 (302)
182 3r0v_A Alpha/beta hydrolase fo 99.6 1.3E-14 4.6E-19 152.5 21.1 206 643-895 6-261 (262)
183 1a8q_A Bromoperoxidase A1; hal 99.6 3E-14 1E-18 151.4 23.9 212 644-895 3-273 (274)
184 4ery_A WD repeat-containing pr 99.6 1.8E-13 6.3E-18 148.3 30.4 266 110-528 25-298 (312)
185 1nir_A Nitrite reductase; hemo 99.6 3.4E-13 1.2E-17 157.6 33.8 322 163-624 159-520 (543)
186 1k8k_C P40, ARP2/3 complex 41 99.6 4.6E-14 1.6E-18 156.9 25.2 236 110-488 10-274 (372)
187 2yys_A Proline iminopeptidase- 99.6 1.2E-14 4.2E-19 155.6 19.7 214 642-897 5-276 (286)
188 2ocg_A Valacyclovir hydrolase; 99.6 7.8E-15 2.7E-19 154.0 17.8 212 647-894 9-253 (254)
189 3u1t_A DMMA haloalkane dehalog 99.6 7.6E-15 2.6E-19 158.4 18.1 213 648-901 17-300 (309)
190 1mtz_A Proline iminopeptidase; 99.6 6.7E-15 2.3E-19 158.1 17.2 213 647-897 12-292 (293)
191 2pbi_B Guanine nucleotide-bind 99.6 1.8E-13 6E-18 151.5 29.1 264 110-528 66-345 (354)
192 3c8d_A Enterochelin esterase; 99.6 4.5E-15 1.6E-19 166.0 16.3 225 637-898 166-398 (403)
193 1q0r_A RDMC, aclacinomycin met 99.6 2.4E-14 8.2E-19 154.3 21.5 210 647-898 8-294 (298)
194 3qit_A CURM TE, polyketide syn 99.6 8.8E-15 3E-19 155.6 17.7 202 647-888 11-281 (286)
195 1brt_A Bromoperoxidase A2; hal 99.6 1.8E-14 6.1E-19 153.5 20.0 209 646-895 9-276 (277)
196 2ynn_A Coatomer subunit beta'; 99.6 1.1E-13 3.8E-18 149.5 26.5 261 110-522 15-283 (304)
197 3guu_A Lipase A; protein struc 99.6 4.1E-14 1.4E-18 157.7 23.4 249 638-901 74-409 (462)
198 3om8_A Probable hydrolase; str 99.6 2.3E-14 7.9E-19 151.6 20.5 211 644-895 9-265 (266)
199 3v48_A Aminohydrolase, putativ 99.6 1.2E-14 4.1E-19 154.0 18.2 197 670-898 15-261 (268)
200 3hfq_A Uncharacterized protein 99.6 2.1E-13 7.3E-18 150.3 28.9 300 216-626 15-327 (347)
201 1pby_B Quinohemoprotein amine 99.6 4.8E-13 1.6E-17 146.3 31.5 276 218-624 10-316 (337)
202 2xe4_A Oligopeptidase B; hydro 99.6 9.8E-14 3.4E-18 168.9 28.3 265 190-571 175-468 (751)
203 4e54_B DNA damage-binding prot 99.6 1E-13 3.4E-18 158.2 26.1 294 110-565 121-434 (435)
204 2pl5_A Homoserine O-acetyltran 99.6 3.2E-14 1.1E-18 158.1 21.2 177 708-896 85-364 (366)
205 3oos_A Alpha/beta hydrolase fa 99.6 1E-14 3.5E-19 154.6 16.4 206 647-894 10-278 (278)
206 1erj_A Transcriptional repress 99.6 3.2E-13 1.1E-17 151.8 29.5 289 189-616 65-387 (393)
207 3dqz_A Alpha-hydroxynitrIle ly 99.6 1.4E-14 4.7E-19 152.1 17.1 198 671-898 5-258 (258)
208 2r11_A Carboxylesterase NP; 26 99.6 1.1E-14 3.7E-19 157.7 16.8 216 640-895 46-305 (306)
209 1ri6_A Putative isomerase YBHE 99.6 3.2E-13 1.1E-17 148.1 28.6 254 110-491 39-311 (343)
210 3qvm_A OLEI00960; structural g 99.6 7.6E-15 2.6E-19 156.0 14.9 197 670-898 28-279 (282)
211 1got_B GT-beta; complex (GTP-b 99.6 5.4E-13 1.8E-17 146.7 30.2 265 189-601 56-330 (340)
212 3e0x_A Lipase-esterase related 99.6 6.2E-15 2.1E-19 153.1 13.9 195 670-894 16-245 (245)
213 2gzs_A IROE protein; enterobac 99.6 6.3E-15 2.2E-19 156.5 14.1 208 638-878 12-250 (278)
214 3i2n_A WD repeat-containing pr 99.6 1E-13 3.5E-18 153.1 24.5 291 110-563 20-355 (357)
215 3fm0_A Protein CIAO1; WDR39,SG 99.6 3.7E-13 1.3E-17 148.3 28.7 230 190-528 18-271 (345)
216 4h5i_A Guanine nucleotide-exch 99.6 2.6E-13 8.8E-18 150.8 27.6 204 333-618 135-343 (365)
217 3ei3_B DNA damage-binding prot 99.6 2.9E-13 9.8E-18 151.5 28.2 274 110-528 75-371 (383)
218 3i28_A Epoxide hydrolase 2; ar 99.6 1.5E-14 5.3E-19 170.4 18.6 221 638-899 236-547 (555)
219 1nir_A Nitrite reductase; hemo 99.6 5.7E-13 2E-17 155.6 31.6 311 111-571 181-524 (543)
220 4dnp_A DAD2; alpha/beta hydrol 99.6 1.1E-14 3.7E-19 153.7 15.5 196 670-896 20-268 (269)
221 3s25_A Hypothetical 7-bladed b 99.6 2.9E-13 1E-17 144.3 26.4 275 115-568 20-300 (302)
222 3hss_A Putative bromoperoxidas 99.6 1E-14 3.5E-19 156.4 15.0 197 670-896 43-290 (293)
223 3iz6_a 40S ribosomal protein R 99.6 2.2E-13 7.7E-18 152.3 26.3 278 110-563 68-377 (380)
224 3sty_A Methylketone synthase 1 99.6 1.8E-14 6.2E-19 152.0 16.0 198 670-897 12-266 (267)
225 3dw8_B Serine/threonine-protei 99.6 2.1E-13 7.1E-18 156.0 26.1 126 332-491 227-374 (447)
226 3nwo_A PIP, proline iminopepti 99.6 3.9E-14 1.3E-18 155.1 18.9 216 647-898 35-323 (330)
227 3vl1_A 26S proteasome regulato 99.6 1.3E-12 4.4E-17 148.0 31.9 257 114-488 103-365 (420)
228 3kxp_A Alpha-(N-acetylaminomet 99.6 5.7E-14 1.9E-18 152.5 19.0 207 647-895 55-313 (314)
229 2xua_A PCAD, 3-oxoadipate ENOL 99.6 8E-14 2.7E-18 147.4 19.6 211 647-896 9-264 (266)
230 2d81_A PHB depolymerase; alpha 99.6 9.6E-15 3.3E-19 156.0 12.0 191 754-949 6-231 (318)
231 1hkh_A Gamma lactamase; hydrol 99.6 4E-14 1.4E-18 150.9 16.9 209 646-895 9-278 (279)
232 4gga_A P55CDC, cell division c 99.6 6.8E-13 2.3E-17 150.5 28.1 266 163-563 125-397 (420)
233 3fsg_A Alpha/beta superfamily 99.6 1E-14 3.5E-19 154.2 12.1 211 648-898 9-269 (272)
234 4g9e_A AHL-lactonase, alpha/be 99.6 2.1E-14 7.2E-19 152.4 14.3 220 639-900 3-272 (279)
235 2ynn_A Coatomer subunit beta'; 99.6 2.9E-12 1E-16 138.3 31.4 245 189-569 14-267 (304)
236 1vyh_C Platelet-activating fac 99.6 1.1E-12 3.7E-17 148.3 29.1 276 189-615 109-408 (410)
237 3i1i_A Homoserine O-acetyltran 99.6 3.4E-14 1.2E-18 158.4 16.2 71 825-898 302-373 (377)
238 2vdu_B TRNA (guanine-N(7)-)-me 99.5 9.2E-13 3.1E-17 151.0 28.6 192 190-486 104-337 (450)
239 2qs9_A Retinoblastoma-binding 99.5 6.2E-14 2.1E-18 140.4 16.4 183 670-899 4-187 (194)
240 3h2g_A Esterase; xanthomonas o 99.5 5.1E-14 1.7E-18 158.3 17.5 151 637-796 44-211 (397)
241 3scy_A Hypothetical bacterial 99.5 9E-13 3.1E-17 146.2 27.0 263 107-491 48-340 (361)
242 3ei3_B DNA damage-binding prot 99.5 5.4E-12 1.9E-16 141.0 33.5 300 189-618 74-382 (383)
243 1c4x_A BPHD, protein (2-hydrox 99.5 5.6E-14 1.9E-18 150.3 16.4 215 645-896 12-284 (285)
244 3iz6_a 40S ribosomal protein R 99.5 4E-12 1.4E-16 142.0 32.2 297 189-619 67-376 (380)
245 4ggc_A P55CDC, cell division c 99.5 1.1E-12 3.9E-17 142.0 27.0 254 163-528 45-303 (318)
246 4ery_A WD repeat-containing pr 99.5 6.9E-12 2.4E-16 135.8 33.1 279 189-615 24-309 (312)
247 3dwl_C Actin-related protein 2 99.5 5.4E-14 1.8E-18 156.9 16.8 236 110-474 13-270 (377)
248 2puj_A 2-hydroxy-6-OXO-6-pheny 99.5 2.4E-13 8.2E-18 145.4 21.1 174 706-896 58-285 (286)
249 2b61_A Homoserine O-acetyltran 99.5 1.1E-13 3.7E-18 154.6 18.5 178 708-896 94-376 (377)
250 3mkq_A Coatomer beta'-subunit; 99.5 1.7E-12 5.7E-17 160.8 30.8 252 180-569 7-267 (814)
251 1wm1_A Proline iminopeptidase; 99.5 1.1E-13 3.6E-18 150.6 17.7 120 641-793 16-139 (317)
252 2rau_A Putative esterase; NP_3 99.5 8.4E-14 2.9E-18 154.1 17.1 180 703-897 84-353 (354)
253 2oaj_A Protein SNI1; WD40 repe 99.5 2.3E-12 7.9E-17 160.0 31.3 190 110-378 19-245 (902)
254 2wue_A 2-hydroxy-6-OXO-6-pheny 99.5 2.5E-13 8.5E-18 145.7 19.2 213 646-895 19-288 (291)
255 2pbi_B Guanine nucleotide-bind 99.5 9E-13 3.1E-17 145.7 24.1 238 110-484 108-353 (354)
256 1iup_A META-cleavage product h 99.5 5.6E-13 1.9E-17 142.2 21.6 211 647-896 12-272 (282)
257 1sq9_A Antiviral protein SKI8; 99.5 1.1E-12 3.7E-17 147.4 24.9 243 110-491 18-323 (397)
258 2cjp_A Epoxide hydrolase; HET: 99.5 3.1E-13 1.1E-17 147.7 20.0 116 646-793 17-138 (328)
259 2e3j_A Epoxide hydrolase EPHB; 99.5 1.1E-13 3.7E-18 153.3 16.5 118 647-794 10-131 (356)
260 1uxo_A YDEN protein; hydrolase 99.5 8.6E-14 2.9E-18 139.1 14.0 183 670-899 4-188 (192)
261 1azw_A Proline iminopeptidase; 99.5 2.1E-13 7.2E-18 147.9 17.9 121 640-793 12-136 (313)
262 1wom_A RSBQ, sigma factor SIGB 99.5 1.5E-13 5E-18 145.8 15.9 196 671-898 21-271 (271)
263 3g9x_A Haloalkane dehalogenase 99.5 1.1E-13 3.6E-18 148.7 14.9 210 647-896 17-292 (299)
264 4aow_A Guanine nucleotide-bind 99.5 5.4E-12 1.9E-16 138.1 28.8 283 110-563 40-339 (340)
265 3p2m_A Possible hydrolase; alp 99.5 6.2E-14 2.1E-18 153.5 13.1 205 649-896 69-329 (330)
266 1jmx_B Amine dehydrogenase; ox 99.5 3.3E-12 1.1E-16 140.4 26.9 306 113-567 4-331 (349)
267 2pm9_A Protein WEB1, protein t 99.5 9.3E-13 3.2E-17 148.9 23.0 297 190-620 14-339 (416)
268 1j1i_A META cleavage compound 99.5 3.7E-13 1.3E-17 144.8 18.5 215 647-899 23-284 (296)
269 3frx_A Guanine nucleotide-bind 99.5 5E-12 1.7E-16 137.5 27.7 285 189-618 18-317 (319)
270 3gff_A IROE-like serine hydrol 99.5 3E-14 1E-18 154.1 9.3 222 637-899 10-267 (331)
271 2xmz_A Hydrolase, alpha/beta h 99.5 1.2E-13 4.2E-18 146.2 13.9 194 671-897 17-266 (269)
272 1u2e_A 2-hydroxy-6-ketonona-2, 99.5 5.1E-13 1.7E-17 143.1 18.9 170 710-895 64-287 (289)
273 3bf7_A Esterase YBFF; thioeste 99.5 2.4E-13 8.3E-18 142.7 16.0 196 670-897 16-255 (255)
274 1pgu_A Actin interacting prote 99.5 3.3E-12 1.1E-16 152.5 27.9 244 110-491 20-284 (615)
275 1yfq_A Cell cycle arrest prote 99.5 2.7E-12 9.3E-17 140.7 25.1 267 110-529 13-312 (342)
276 2qvb_A Haloalkane dehalogenase 99.5 1.9E-13 6.6E-18 146.5 15.4 209 646-898 14-293 (297)
277 3k26_A Polycomb protein EED; W 99.5 2E-12 6.9E-17 143.0 23.9 260 164-528 45-354 (366)
278 3r40_A Fluoroacetate dehalogen 99.5 2.7E-13 9.3E-18 145.9 16.0 210 646-897 19-303 (306)
279 1xkl_A SABP2, salicylic acid-b 99.5 6.4E-13 2.2E-17 141.0 18.6 199 670-898 4-260 (273)
280 3bwx_A Alpha/beta hydrolase; Y 99.5 1.4E-12 4.9E-17 139.2 21.1 216 640-896 6-284 (285)
281 4fol_A FGH, S-formylglutathion 99.5 4.1E-13 1.4E-17 142.6 16.5 244 638-899 13-297 (299)
282 1b6g_A Haloalkane dehalogenase 99.5 6.4E-13 2.2E-17 143.9 18.4 209 650-896 34-308 (310)
283 3pic_A CIP2; alpha/beta hydrol 99.5 1.5E-12 5.3E-17 137.8 20.5 213 650-902 90-349 (375)
284 4e54_B DNA damage-binding prot 99.5 6.9E-12 2.3E-16 143.0 27.7 305 189-622 120-434 (435)
285 3dm0_A Maltose-binding peripla 99.5 5.3E-12 1.8E-16 153.2 28.3 238 110-491 384-633 (694)
286 3dw8_B Serine/threonine-protei 99.5 1.7E-11 5.7E-16 140.0 30.8 177 332-570 178-382 (447)
287 2wfl_A Polyneuridine-aldehyde 99.5 8.3E-13 2.8E-17 139.4 18.2 196 670-895 10-263 (264)
288 1ycd_A Hypothetical 27.3 kDa p 99.5 6.6E-14 2.3E-18 145.8 9.1 148 740-899 83-239 (243)
289 2xt0_A Haloalkane dehalogenase 99.5 8.2E-13 2.8E-17 142.1 17.9 208 650-895 33-296 (297)
290 2xzm_R RACK1; ribosome, transl 99.5 8.8E-12 3E-16 137.1 26.6 300 189-618 22-340 (343)
291 1mj5_A 1,3,4,6-tetrachloro-1,4 99.5 4.7E-13 1.6E-17 143.9 16.0 211 645-899 14-295 (302)
292 4g4g_A 4-O-methyl-glucuronoyl 99.5 2.3E-12 8E-17 137.7 20.8 212 651-903 124-384 (433)
293 3bdv_A Uncharacterized protein 99.5 7.9E-13 2.7E-17 131.9 16.4 127 737-897 59-187 (191)
294 2q0x_A Protein DUF1749, unchar 99.5 6E-13 2.1E-17 145.5 16.4 198 670-898 38-295 (335)
295 2vdu_B TRNA (guanine-N(7)-)-me 99.5 2.1E-11 7.3E-16 139.5 29.7 213 332-625 150-399 (450)
296 3c6x_A Hydroxynitrilase; atomi 99.5 5.6E-13 1.9E-17 140.1 15.1 197 671-897 4-256 (257)
297 1jmx_B Amine dehydrogenase; ox 99.4 2.4E-11 8E-16 133.5 28.7 290 193-623 4-330 (349)
298 3fla_A RIFR; alpha-beta hydrol 99.4 1E-12 3.4E-17 138.6 16.9 197 669-898 19-250 (267)
299 1m33_A BIOH protein; alpha-bet 99.4 4.2E-13 1.4E-17 141.1 13.7 190 672-896 15-255 (258)
300 2vat_A Acetyl-COA--deacetylcep 99.4 3E-13 1E-17 154.6 13.6 68 824-898 375-443 (444)
301 3afi_E Haloalkane dehalogenase 99.4 8.8E-13 3E-17 143.3 16.3 212 647-898 14-302 (316)
302 2pm7_B Protein transport prote 99.4 1.1E-11 3.9E-16 133.2 24.8 247 110-490 11-287 (297)
303 1pja_A Palmitoyl-protein thioe 99.4 1.1E-12 3.6E-17 141.6 16.4 196 670-894 36-301 (302)
304 1k8k_C P40, ARP2/3 complex 41 99.4 4.9E-12 1.7E-16 140.4 22.3 226 189-527 9-262 (372)
305 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.9E-11 6.6E-16 135.6 26.9 273 164-528 15-328 (365)
306 2aq5_A Coronin-1A; WD40 repeat 99.4 7.3E-12 2.5E-16 141.1 23.6 271 163-567 57-348 (402)
307 1sq9_A Antiviral protein SKI8; 99.4 4E-11 1.4E-15 134.4 29.6 250 189-569 17-330 (397)
308 4aez_A CDC20, WD repeat-contai 99.4 4.5E-11 1.5E-15 134.5 30.0 281 190-621 95-383 (401)
309 1isp_A Lipase; alpha/beta hydr 99.4 2.6E-12 8.9E-17 126.9 17.4 169 670-897 3-176 (181)
310 1jof_A Carboxy-CIS,CIS-muconat 99.4 8.2E-12 2.8E-16 138.6 23.4 262 110-489 41-342 (365)
311 3i2n_A WD repeat-containing pr 99.4 1.1E-11 3.9E-16 136.5 23.6 302 189-619 19-354 (357)
312 3ibt_A 1H-3-hydroxy-4-oxoquino 99.4 2.2E-12 7.4E-17 135.7 16.6 209 648-895 7-263 (264)
313 1yfq_A Cell cycle arrest prote 99.4 3.3E-11 1.1E-15 132.0 26.6 244 189-568 12-289 (342)
314 2hes_X YDR267CP; beta-propelle 99.4 1.5E-11 5.2E-16 134.4 23.5 271 110-528 16-316 (330)
315 3dwl_C Actin-related protein 2 99.4 9.7E-13 3.3E-17 146.7 14.2 226 190-528 13-270 (377)
316 3kda_A CFTR inhibitory factor 99.4 1.5E-12 5E-17 140.0 15.0 208 646-897 16-294 (301)
317 4a11_B DNA excision repair pro 99.4 5.3E-11 1.8E-15 133.7 28.3 298 110-565 45-369 (408)
318 1ehy_A Protein (soluble epoxid 99.4 1.4E-11 4.8E-16 132.2 22.1 206 647-894 16-293 (294)
319 4aow_A Guanine nucleotide-bind 99.4 1.8E-10 6.3E-15 125.8 30.8 292 189-620 39-339 (340)
320 2j04_A TAU60, YPL007P, hypothe 99.4 8.8E-13 3E-17 149.1 12.2 230 109-474 86-349 (588)
321 1pgu_A Actin interacting prote 99.4 1.4E-10 4.7E-15 138.3 31.9 287 189-621 19-331 (615)
322 3bg1_A Protein SEC13 homolog; 99.4 1.6E-11 5.5E-16 133.3 21.6 242 110-490 15-295 (316)
323 2oaj_A Protein SNI1; WD40 repe 99.4 8.4E-11 2.9E-15 145.9 30.6 72 400-489 437-520 (902)
324 3odt_A Protein DOA1; ubiquitin 99.4 6.5E-11 2.2E-15 127.7 26.0 275 110-565 20-300 (313)
325 3jrp_A Fusion protein of prote 99.4 1.8E-11 6.2E-16 136.0 21.9 241 110-490 13-289 (379)
326 2aq5_A Coronin-1A; WD40 repeat 99.4 4.2E-11 1.4E-15 134.8 24.8 291 191-625 37-349 (402)
327 3vu4_A KMHSV2; beta-propeller 99.4 5.5E-11 1.9E-15 131.4 25.1 242 109-488 20-271 (355)
328 1qe3_A PNB esterase, para-nitr 99.4 2.5E-13 8.6E-18 155.4 6.2 210 652-879 83-316 (489)
329 2qmq_A Protein NDRG2, protein 99.4 1.2E-11 4.1E-16 132.0 18.3 215 647-895 18-285 (286)
330 3dm0_A Maltose-binding peripla 99.4 1.7E-10 5.7E-15 140.0 30.5 290 189-616 383-691 (694)
331 2j04_B YDR362CP, TAU91; beta p 99.4 8.9E-11 3E-15 136.0 26.5 247 110-476 135-418 (524)
332 2psd_A Renilla-luciferin 2-mon 99.3 8E-12 2.7E-16 135.8 16.0 210 647-899 28-307 (318)
333 3qmv_A Thioesterase, REDJ; alp 99.3 6.6E-13 2.3E-17 141.5 7.2 224 638-893 14-279 (280)
334 3odt_A Protein DOA1; ubiquitin 99.3 3E-10 1E-14 122.4 27.7 273 189-621 19-299 (313)
335 2pm7_B Protein transport prote 99.3 1.8E-10 6.2E-15 123.7 25.5 226 189-528 10-273 (297)
336 3mmy_A MRNA export factor; mRN 99.3 1.3E-10 4.4E-15 128.4 24.5 264 110-528 41-334 (368)
337 3b12_A Fluoroacetate dehalogen 99.0 1.2E-13 4.2E-18 148.5 0.0 197 670-898 25-293 (304)
338 3jrp_A Fusion protein of prote 99.3 2.1E-10 7.2E-15 127.3 26.2 230 189-528 12-275 (379)
339 1r3d_A Conserved hypothetical 99.3 2.4E-11 8.2E-16 128.1 17.3 195 670-898 16-263 (264)
340 3v7d_B Cell division control p 99.3 1.5E-09 5.1E-14 124.6 31.9 256 163-566 142-426 (464)
341 3l80_A Putative uncharacterize 99.3 1.1E-12 3.7E-17 140.6 5.1 168 710-897 67-289 (292)
342 4a11_B DNA excision repair pro 99.3 1.1E-09 3.9E-14 122.7 30.3 291 189-621 44-368 (408)
343 3k26_A Polycomb protein EED; W 99.3 2.2E-10 7.6E-15 126.4 23.8 287 189-616 19-364 (366)
344 3f3f_A Nucleoporin SEH1; struc 99.3 1E-10 3.5E-15 127.9 20.8 103 110-261 13-130 (351)
345 4gga_A P55CDC, cell division c 99.3 1.3E-09 4.5E-14 123.3 30.5 282 189-619 106-396 (420)
346 2mad_H Methylamine dehydrogena 99.3 9.8E-10 3.3E-14 121.6 27.3 135 335-491 216-351 (373)
347 3f3f_A Nucleoporin SEH1; struc 99.3 3.7E-10 1.3E-14 123.3 23.3 207 189-488 12-249 (351)
348 2wj6_A 1H-3-hydroxy-4-oxoquina 99.3 8.6E-11 2.9E-15 124.7 17.4 214 647-897 11-272 (276)
349 2oiz_A Aromatic amine dehydrog 99.3 8.1E-10 2.8E-14 122.1 25.8 131 336-491 204-335 (361)
350 2mad_H Methylamine dehydrogena 99.2 8.9E-09 3.1E-13 113.8 33.3 283 164-567 48-356 (373)
351 3bg1_A Protein SEC13 homolog; 99.2 3.5E-10 1.2E-14 122.7 20.9 242 189-528 14-281 (316)
352 4i19_A Epoxide hydrolase; stru 99.2 1.9E-10 6.6E-15 127.9 18.9 117 647-793 75-203 (388)
353 2hes_X YDR267CP; beta-propelle 99.2 6.7E-10 2.3E-14 121.2 22.6 239 110-486 60-326 (330)
354 3gre_A Serine/threonine-protei 99.2 3.6E-10 1.2E-14 128.6 20.7 246 110-491 65-360 (437)
355 1qks_A Cytochrome CD1 nitrite 99.2 6.3E-09 2.2E-13 121.1 31.4 312 112-570 200-547 (567)
356 1qks_A Cytochrome CD1 nitrite 99.2 1.9E-08 6.6E-13 117.0 35.5 325 163-623 177-543 (567)
357 2oiz_A Aromatic amine dehydrog 99.2 1.1E-08 3.6E-13 113.0 31.9 92 163-261 31-125 (361)
358 3jro_A Fusion protein of prote 99.2 1.6E-10 5.4E-15 141.2 18.3 238 110-487 11-284 (753)
359 2xyi_A Probable histone-bindin 99.2 8.1E-10 2.8E-14 125.5 22.9 243 109-487 129-409 (430)
360 3lcr_A Tautomycetin biosynthet 99.2 4.9E-10 1.7E-14 121.3 18.9 179 704-898 102-303 (319)
361 3c5v_A PME-1, protein phosphat 99.2 6.2E-10 2.1E-14 120.6 19.7 196 670-897 38-300 (316)
362 3e5z_A Putative gluconolactona 99.2 2.4E-09 8.3E-14 114.7 23.4 251 112-491 31-287 (296)
363 4ggc_A P55CDC, cell division c 99.2 2E-08 6.8E-13 108.3 30.5 282 190-618 27-315 (318)
364 1kez_A Erythronolide synthase; 99.2 1.5E-10 5.2E-15 124.5 13.1 200 669-898 66-282 (300)
365 3qyj_A ALR0039 protein; alpha/ 99.2 1E-09 3.6E-14 117.3 19.5 111 647-792 12-129 (291)
366 3c75_H MADH, methylamine dehyd 99.2 4.1E-09 1.4E-13 117.2 24.7 134 336-491 269-403 (426)
367 2dg1_A DRP35, lactonase; beta 99.1 3.3E-09 1.1E-13 115.7 23.0 239 163-490 66-316 (333)
368 2xyi_A Probable histone-bindin 99.1 9.1E-09 3.1E-13 116.8 27.4 231 189-528 129-397 (430)
369 3jro_A Fusion protein of prote 99.1 1.7E-09 5.7E-14 132.1 22.2 229 189-528 10-273 (753)
370 3fle_A SE_1780 protein; struct 99.1 1.3E-09 4.4E-14 112.4 17.9 152 737-894 77-247 (249)
371 3lrv_A PRE-mRNA-splicing facto 99.1 5.2E-09 1.8E-13 114.8 24.0 232 114-490 42-294 (343)
372 3ds8_A LIN2722 protein; unkonw 99.1 9E-10 3.1E-14 115.0 16.9 154 735-898 72-243 (254)
373 3v7d_B Cell division control p 99.1 2.7E-08 9.3E-13 114.0 30.1 284 195-623 127-426 (464)
374 3sjl_D Methylamine dehydrogena 99.1 4.8E-08 1.6E-12 106.5 29.5 281 163-571 59-373 (386)
375 2dg1_A DRP35, lactonase; beta 99.1 9.4E-09 3.2E-13 112.1 24.2 236 190-529 46-299 (333)
376 2j04_B YDR362CP, TAU91; beta p 99.1 2.1E-10 7.2E-15 132.8 11.3 274 110-489 209-518 (524)
377 2ovr_B FBW7, F-BOX/WD repeat p 99.1 1.2E-07 4.2E-12 107.9 34.3 314 115-618 124-442 (445)
378 3lrv_A PRE-mRNA-splicing facto 99.1 1.2E-08 4E-13 111.9 24.7 166 314-528 104-279 (343)
379 3e5z_A Putative gluconolactona 99.1 1.7E-08 6E-13 107.9 25.3 246 190-565 29-290 (296)
380 1ukc_A ESTA, esterase; fungi, 99.1 2.2E-10 7.4E-15 132.0 10.9 211 646-878 82-327 (522)
381 3sjl_D Methylamine dehydrogena 99.1 1.7E-08 5.7E-13 110.1 25.1 269 113-491 82-364 (386)
382 3mmy_A MRNA export factor; mRN 99.1 7.1E-09 2.4E-13 114.2 22.8 113 189-377 40-162 (368)
383 3c75_H MADH, methylamine dehyd 99.1 2.7E-08 9.1E-13 110.6 26.8 274 164-568 100-409 (426)
384 2ghs_A AGR_C_1268P; regucalcin 99.1 9.9E-09 3.4E-13 111.6 22.5 233 113-477 53-293 (326)
385 4gq1_A NUP37; propeller, trans 99.0 3.6E-09 1.2E-13 118.5 18.2 51 431-486 337-387 (393)
386 3lp5_A Putative cell surface h 99.0 3.3E-09 1.1E-13 109.4 16.2 145 736-895 77-232 (250)
387 3ils_A PKS, aflatoxin biosynth 99.0 2.4E-09 8.1E-14 112.7 14.5 197 670-894 21-264 (265)
388 3dr2_A Exported gluconolactona 99.0 1.8E-08 6.1E-13 108.5 21.6 252 111-488 47-304 (305)
389 3g4e_A Regucalcin; six bladed 99.0 2.7E-08 9.1E-13 106.6 22.3 239 113-476 17-262 (297)
390 3g02_A Epoxide hydrolase; alph 99.0 7.4E-09 2.5E-13 115.5 17.7 212 648-898 93-397 (408)
391 3gre_A Serine/threonine-protei 99.0 1.9E-08 6.6E-13 114.2 21.1 211 110-440 113-357 (437)
392 2h7c_A Liver carboxylesterase 99.0 9.2E-10 3.2E-14 127.5 9.5 132 646-795 95-233 (542)
393 1tca_A Lipase; hydrolase(carbo 99.0 2E-09 6.9E-14 115.8 11.3 211 648-896 12-243 (317)
394 3g4e_A Regucalcin; six bladed 98.9 3.7E-07 1.3E-11 97.7 28.6 223 314-606 35-264 (297)
395 4gq1_A NUP37; propeller, trans 98.9 4.7E-08 1.6E-12 109.3 22.4 176 315-528 167-378 (393)
396 3dr2_A Exported gluconolactona 98.9 1.7E-07 5.9E-12 100.7 24.9 228 314-616 67-304 (305)
397 3vu4_A KMHSV2; beta-propeller 98.9 6.3E-08 2.2E-12 106.6 21.9 126 325-489 188-337 (355)
398 2ogt_A Thermostable carboxyles 98.9 2.3E-09 7.9E-14 122.8 9.8 132 646-795 81-224 (498)
399 2ghs_A AGR_C_1268P; regucalcin 98.9 1.3E-07 4.3E-12 102.8 22.7 226 191-528 51-290 (326)
400 2ha2_A ACHE, acetylcholinester 98.9 1.5E-09 5.1E-14 125.8 7.2 132 646-794 93-232 (543)
401 2k2q_B Surfactin synthetase th 98.8 3.6E-09 1.2E-13 109.6 7.6 169 710-897 37-237 (242)
402 1p22_A F-BOX/WD-repeat protein 98.8 4.8E-07 1.6E-11 102.6 26.0 221 114-487 137-364 (435)
403 1p0i_A Cholinesterase; serine 98.8 4.5E-09 1.5E-13 121.5 8.0 132 646-795 89-228 (529)
404 1ei9_A Palmitoyl protein thioe 98.8 4.6E-08 1.6E-12 103.2 14.7 86 704-794 27-116 (279)
405 2fj0_A JuvenIle hormone estera 98.8 2.3E-09 7.7E-14 124.4 4.7 130 652-794 91-233 (551)
406 1ea5_A ACHE, acetylcholinester 98.8 6.2E-09 2.1E-13 120.3 7.8 132 646-795 91-230 (537)
407 2w18_A PALB2, fancn, partner a 98.7 3.1E-07 1.1E-11 97.6 18.2 125 110-261 113-244 (356)
408 1llf_A Lipase 3; candida cylin 98.7 2.2E-08 7.4E-13 115.6 9.7 130 652-793 98-243 (534)
409 2ece_A 462AA long hypothetical 98.7 5.1E-06 1.8E-10 91.0 26.9 254 163-474 106-399 (462)
410 2ovr_B FBW7, F-BOX/WD repeat p 98.7 1E-05 3.4E-10 91.9 31.0 268 195-622 124-395 (445)
411 1gpl_A RP2 lipase; serine este 98.7 3.9E-08 1.3E-12 110.5 10.6 161 670-877 70-236 (432)
412 1mda_H Methylamine dehydrogena 98.7 8.7E-07 3E-11 96.8 20.9 253 220-569 47-354 (368)
413 1dx4_A ACHE, acetylcholinester 98.7 2.9E-08 9.8E-13 115.9 9.2 115 668-794 139-267 (585)
414 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.7E-06 5.7E-11 93.0 22.7 241 163-490 46-299 (314)
415 1thg_A Lipase; hydrolase(carbo 98.7 3.1E-08 1.1E-12 114.6 9.1 134 646-793 102-251 (544)
416 2ece_A 462AA long hypothetical 98.7 5.4E-05 1.9E-09 83.0 34.0 119 335-475 141-272 (462)
417 2bce_A Cholesterol esterase; h 98.7 1.8E-08 6.3E-13 116.8 6.8 140 645-793 76-222 (579)
418 1npe_A Nidogen, entactin; glyc 98.6 2.5E-06 8.4E-11 89.5 22.6 190 200-491 1-199 (267)
419 3hrp_A Uncharacterized protein 98.6 5.5E-06 1.9E-10 92.7 26.0 223 164-487 153-407 (409)
420 1npe_A Nidogen, entactin; glyc 98.6 7.3E-06 2.5E-10 85.8 25.1 224 314-622 10-242 (267)
421 2hfk_A Pikromycin, type I poly 98.6 1.1E-07 3.7E-12 102.9 10.7 174 710-898 115-312 (319)
422 3dsm_A Uncharacterized protein 98.6 3.4E-06 1.2E-10 91.5 22.1 191 199-491 52-254 (328)
423 1p22_A F-BOX/WD-repeat protein 98.6 5.4E-06 1.9E-10 93.8 24.2 226 195-563 138-367 (435)
424 2w18_A PALB2, fancn, partner a 98.6 3.3E-06 1.1E-10 89.7 20.3 158 332-528 179-345 (356)
425 1mda_H Methylamine dehydrogena 98.6 2E-06 7E-11 93.9 19.5 281 164-491 47-347 (368)
426 3bix_A Neuroligin-1, neuroligi 98.6 5.3E-08 1.8E-12 113.4 7.2 128 652-793 112-248 (574)
427 3dsm_A Uncharacterized protein 98.6 4.3E-06 1.5E-10 90.7 21.7 230 164-490 65-302 (328)
428 2oit_A Nucleoporin 214KDA; NH2 98.5 3.3E-06 1.1E-10 95.4 21.4 151 189-416 93-258 (434)
429 2oit_A Nucleoporin 214KDA; NH2 98.5 3E-06 1E-10 95.7 20.8 105 332-477 150-262 (434)
430 2cb9_A Fengycin synthetase; th 98.5 4.9E-07 1.7E-11 93.5 13.0 162 710-897 46-225 (244)
431 3fvz_A Peptidyl-glycine alpha- 98.5 4.2E-06 1.4E-10 90.8 20.2 120 334-490 198-322 (329)
432 1fwx_A Nitrous oxide reductase 98.5 4.1E-06 1.4E-10 95.2 20.1 260 164-475 113-407 (595)
433 3hrp_A Uncharacterized protein 98.5 2.2E-05 7.5E-10 87.8 25.8 201 190-491 132-355 (409)
434 1rwi_B Serine/threonine-protei 98.5 1.8E-05 6E-10 82.8 23.5 193 190-490 68-264 (270)
435 3tej_A Enterobactin synthase c 98.5 6.8E-07 2.3E-11 97.0 12.7 170 710-894 125-327 (329)
436 1q7f_A NHL, brain tumor CG1071 98.5 1.5E-05 5.1E-10 84.3 23.0 193 190-486 78-278 (286)
437 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 1E-05 3.4E-10 86.8 21.9 247 190-528 19-286 (314)
438 3n2z_B Lysosomal Pro-X carboxy 98.5 6.5E-07 2.2E-11 99.9 12.4 85 707-794 63-161 (446)
439 1ys1_X Lipase; CIS peptide Leu 98.5 8.4E-07 2.9E-11 95.2 12.9 106 670-794 8-114 (320)
440 1rwi_B Serine/threonine-protei 98.4 2.3E-05 7.7E-10 81.9 23.2 195 190-491 25-223 (270)
441 1jmk_C SRFTE, surfactin synthe 98.4 4.6E-07 1.6E-11 92.8 9.6 156 713-894 43-226 (230)
442 2zyr_A Lipase, putative; fatty 98.4 3.4E-07 1.2E-11 101.8 8.7 166 670-896 22-229 (484)
443 3v65_B Low-density lipoprotein 98.4 2.9E-05 1E-09 86.0 24.3 180 218-491 95-278 (386)
444 1bu8_A Protein (pancreatic lip 98.4 5.2E-07 1.8E-11 101.6 9.8 108 670-793 70-180 (452)
445 1fwx_A Nitrous oxide reductase 98.4 1.9E-05 6.5E-10 89.7 22.2 209 190-490 86-308 (595)
446 3fvz_A Peptidyl-glycine alpha- 98.4 4.3E-05 1.5E-09 82.8 24.5 234 314-616 69-320 (329)
447 1q7f_A NHL, brain tumor CG1071 98.4 3E-05 1E-09 81.9 22.6 201 190-490 31-238 (286)
448 3icv_A Lipase B, CALB; circula 98.4 1.6E-06 5.4E-11 91.5 12.2 119 651-795 49-170 (316)
449 3v65_B Low-density lipoprotein 98.4 8.1E-05 2.8E-09 82.4 26.8 188 313-569 95-285 (386)
450 1w52_X Pancreatic lipase relat 98.4 7.3E-07 2.5E-11 100.4 9.9 108 670-793 70-180 (452)
451 3v64_C Agrin; beta propeller, 98.4 6.1E-05 2.1E-09 82.2 24.8 180 218-491 52-235 (349)
452 1ijq_A LDL receptor, low-densi 98.3 0.0002 7E-09 76.8 27.3 225 313-620 9-240 (316)
453 1ijq_A LDL receptor, low-densi 98.3 0.0001 3.5E-09 79.2 24.8 180 218-491 9-196 (316)
454 1ex9_A Lactonizing lipase; alp 98.3 2.9E-06 9.9E-11 89.8 11.5 103 670-794 7-109 (285)
455 3v64_C Agrin; beta propeller, 98.3 0.0002 6.9E-09 78.0 26.5 188 313-569 52-242 (349)
456 3p5b_L Low density lipoprotein 98.3 0.00016 5.4E-09 80.4 26.0 180 218-491 91-278 (400)
457 3no2_A Uncharacterized protein 98.3 0.00018 6.3E-09 75.4 25.2 182 215-491 11-196 (276)
458 1hpl_A Lipase; hydrolase(carbo 98.2 2.4E-06 8E-11 95.7 10.0 108 670-793 69-179 (449)
459 2z2n_A Virginiamycin B lyase; 98.2 0.00018 6.1E-09 76.1 24.3 192 190-489 58-254 (299)
460 3s94_A LRP-6, low-density lipo 98.2 0.0045 1.5E-07 72.7 37.9 166 401-625 351-517 (619)
461 2x5x_A PHB depolymerase PHAZ7; 98.2 3.2E-06 1.1E-10 91.0 10.1 88 703-795 72-166 (342)
462 3p5b_L Low density lipoprotein 98.2 0.00026 9E-09 78.6 26.0 225 313-620 91-322 (400)
463 2z2n_A Virginiamycin B lyase; 98.2 0.00073 2.5E-08 71.3 28.3 191 190-488 16-211 (299)
464 3no2_A Uncharacterized protein 98.2 0.00017 5.7E-09 75.7 22.8 80 163-261 15-94 (276)
465 3sov_A LRP-6, low-density lipo 98.2 0.00014 4.9E-09 77.9 22.4 186 218-499 12-204 (318)
466 3s94_A LRP-6, low-density lipo 98.1 0.0057 1.9E-07 71.8 36.7 124 458-625 351-474 (619)
467 1rp1_A Pancreatic lipase relat 98.1 3.9E-06 1.3E-10 93.9 9.1 107 670-793 70-179 (450)
468 3sov_A LRP-6, low-density lipo 98.1 0.0003 1E-08 75.4 23.4 224 313-621 12-241 (318)
469 2qc5_A Streptogramin B lactona 98.1 0.0011 3.8E-08 69.8 26.8 193 190-490 63-260 (300)
470 3m0c_C LDL receptor, low-densi 98.1 0.00043 1.5E-08 83.3 25.7 180 218-491 403-590 (791)
471 1n7d_A LDL receptor, low-densi 98.1 7.7E-05 2.6E-09 89.2 19.2 229 312-623 384-619 (699)
472 3m0c_C LDL receptor, low-densi 98.0 0.0011 3.7E-08 79.8 27.9 225 313-620 403-634 (791)
473 2dst_A Hypothetical protein TT 98.0 1.5E-05 5E-10 73.2 9.2 64 710-782 40-103 (131)
474 1n7d_A LDL receptor, low-densi 98.0 0.00012 4E-09 87.6 19.4 180 218-491 385-572 (699)
475 2iwa_A Glutamine cyclotransfer 98.0 0.00024 8.1E-09 73.2 18.9 198 191-490 23-237 (266)
476 2p4o_A Hypothetical protein; p 98.0 0.00081 2.8E-08 71.7 23.6 243 179-528 22-276 (306)
477 2iwa_A Glutamine cyclotransfer 98.0 0.00029 9.9E-09 72.5 19.0 175 313-562 43-238 (266)
478 2qe8_A Uncharacterized protein 98.0 0.0012 3.9E-08 71.8 24.9 178 314-524 93-305 (343)
479 2qe8_A Uncharacterized protein 98.0 0.00097 3.3E-08 72.4 24.3 143 315-488 43-224 (343)
480 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0017 5.9E-08 76.3 27.0 189 201-491 7-198 (628)
481 2qc5_A Streptogramin B lactona 97.9 0.0053 1.8E-07 64.5 28.0 193 190-490 21-218 (300)
482 3tc9_A Hypothetical hydrolase; 97.8 0.0018 6.3E-08 72.5 23.3 136 164-375 160-301 (430)
483 3tjm_A Fatty acid synthase; th 97.8 2.7E-05 9.1E-10 82.3 7.1 69 713-793 49-123 (283)
484 4a0p_A LRP6, LRP-6, low-densit 97.8 0.0078 2.7E-07 70.7 28.6 223 312-621 13-240 (628)
485 2p4o_A Hypothetical protein; p 97.7 0.002 6.8E-08 68.6 21.0 93 340-475 175-277 (306)
486 3qqz_A Putative uncharacterize 97.7 0.0038 1.3E-07 63.8 20.7 211 180-490 20-253 (255)
487 2fp8_A Strictosidine synthase; 97.6 0.0079 2.7E-07 64.4 24.3 144 316-490 103-269 (322)
488 2fp8_A Strictosidine synthase; 97.6 0.003 1E-07 67.7 20.6 72 314-411 165-241 (322)
489 3tc9_A Hypothetical hydrolase; 97.5 0.014 4.6E-07 65.4 25.2 158 190-440 138-299 (430)
490 3qqz_A Putative uncharacterize 97.5 0.019 6.6E-07 58.5 23.8 115 332-487 27-150 (255)
491 3nol_A Glutamine cyclotransfer 97.5 0.0054 1.8E-07 62.3 18.8 132 312-491 63-202 (262)
492 2hih_A Lipase 46 kDa form; A1 97.4 0.0006 2.1E-08 75.5 11.0 36 759-794 151-212 (431)
493 2dsn_A Thermostable lipase; T1 97.3 0.0014 4.7E-08 71.5 13.1 37 758-794 103-164 (387)
494 3nol_A Glutamine cyclotransfer 97.3 0.0073 2.5E-07 61.3 16.8 195 191-488 45-254 (262)
495 1kb0_A Quinohemoprotein alcoho 97.3 0.29 1E-05 58.0 33.6 27 199-234 127-153 (677)
496 2ism_A Putative oxidoreductase 97.3 0.013 4.5E-07 63.6 20.0 67 190-261 76-151 (352)
497 1xip_A Nucleoporin NUP159; bet 97.2 0.013 4.5E-07 63.9 19.0 83 313-416 145-231 (388)
498 3a9g_A Putative uncharacterize 97.1 0.11 3.7E-06 56.2 24.8 81 402-488 138-229 (354)
499 3kya_A Putative phosphatase; s 97.1 0.085 2.9E-06 59.2 24.3 62 191-261 141-210 (496)
500 4hw6_A Hypothetical protein, I 97.0 0.04 1.4E-06 61.5 21.2 134 164-374 163-303 (433)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=8.6e-56 Score=542.84 Aligned_cols=630 Identities=14% Similarity=0.089 Sum_probs=443.6
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeee-ecCCC
Q 002194 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEI-QGFPD 187 (954)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~l-t~~~~ 187 (954)
+...+++|||||++|+.. . ..|++|++.+ ++.+.+ .....
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~----------------------------------~~i~~~~~~~----~~~~~~~~~~~~ 57 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-E----------------------------------NNILVFNAEY----GNSSVFLENSTF 57 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-T----------------------------------TEEEEEETTT----CCEEEEECTTTT
T ss_pred ccccccEECCCCcEEEEc-C----------------------------------CcEEEEECCC----CceEEEEechhh
Confidence 356689999999877765 3 3799999865 444444 22211
Q ss_pred CC-cccc--eeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecC
Q 002194 188 GA-KLNF--VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (954)
Q Consensus 188 ~~-~~~~--~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (954)
.. .+.. ++|||||++|+|..........+...++|++|+++|+.++++..+.. +..++|||||+.|+|+
T Consensus 58 ~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~-----~~~~~~SPdG~~la~~--- 129 (740)
T 4a5s_A 58 DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNN-----TQWVTWSPVGHKLAYV--- 129 (740)
T ss_dssp TTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTT-----EEEEEECSSTTCEEEE---
T ss_pred hhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCc-----ceeeEECCCCCEEEEE---
Confidence 11 2333 89999999999987643222234458899999999999988865543 5689999999999988
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCCcc---c------
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAV---Y------ 334 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~~~---~------ 334 (954)
...+||++++ +|+.++++..+. +
T Consensus 130 -----------------------------------------------~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~ 162 (740)
T 4a5s_A 130 -----------------------------------------------WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITD 162 (740)
T ss_dssp -----------------------------------------------ETTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred -----------------------------------------------ECCeEEEEECCCCceEEEcCCCCccceecCccc
Confidence 2245899998 788888876421 1
Q ss_pred -----------cccccCCCCcEEEEEeecCCcc--ccc------------------ccC---CCCcceEEEeccC---c-
Q 002194 335 -----------TSLDPSPDEKYILISSIHRPYS--FIV------------------PCG---RFPRQVGVWTTDG---I- 376 (954)
Q Consensus 335 -----------~~~~~SpDGk~l~~~s~~~~~~--~~~------------------~~~---~~~~~l~l~d~~g---~- 376 (954)
..+.|||||++|||.+.+...- +.. |.. .-..+|++||+++ +
T Consensus 163 ~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~ 242 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVT 242 (740)
T ss_dssp HHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSS
T ss_pred ccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCC
Confidence 2478999999999987554310 000 000 1112688999988 6
Q ss_pred --eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC-------
Q 002194 377 --FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG------- 447 (954)
Q Consensus 377 --~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~------- 447 (954)
..+++..... +.+....+..++|||||+.++++..+. .....|+++++ ++++
T Consensus 243 ~~~~~~l~~~~~-------~~~~~~~~~~~~wspdg~~~~~~~~r~---------~~~~~i~~~d~---~tg~~~~~~~~ 303 (740)
T 4a5s_A 243 NATSIQITAPAS-------MLIGDHYLCDVTWATQERISLQWLRRI---------QNYSVMDICDY---DESSGRWNCLV 303 (740)
T ss_dssp CCCEEEECCCHH-------HHTSCEEEEEEEEEETTEEEEEEEESS---------TTEEEEEEEEE---ETTTTEEEECG
T ss_pred cceEEEecCCcc-------CCCCCeEEEEEEEeCCCeEEEEEeCCC---------CCEEEEEEEEC---CCCccccceeE
Confidence 5555543110 000112245689999999777764432 22347899996 4554
Q ss_pred ceEE--eecccc-----cCceeeccCCceEE-EEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeecc
Q 002194 448 PEIL--HKLDLR-----YGGISWCDDSLALV-YESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTS 519 (954)
Q Consensus 448 ~~~l--~~~~~~-----~~~~~~spDg~~l~-~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp 519 (954)
.+.+ ...... ...++|||||+.|+ +.+..++ ..+||+++++++ ..+.++...... . ..+++
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G-~~~l~~~~~~~~--~~~~lT~g~~~v-~-------~~~~~ 372 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG-YRHICYFQIDKK--DCTFITKGTWEV-I-------GIEAL 372 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS-CEEEEEEETTCS--SCEESCCSSSCE-E-------EEEEE
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC-ceEEEEEECCCC--ceEecccCCEEE-E-------EEEEE
Confidence 3333 222222 23799999999998 6655544 588999999985 567777654322 1 12346
Q ss_pred CCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeE-EEeccC-cccccceeEEeccCCccccccccCCE
Q 002194 520 TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE-RIWESD-KEKYYETTVALMSDQTEGDLYLNQLK 597 (954)
Q Consensus 520 dG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~ 597 (954)
||+.|+|..... +. .....+||.+++++++.+ +|+..- +. . .....++||+|+++
T Consensus 373 d~~~i~f~~~~~------------~~--~~~~~~ly~v~~~g~~~~~~lt~~~~~~----~-----~~~~~~~~S~dg~~ 429 (740)
T 4a5s_A 373 TSDYLYYISNEY------------KG--MPGGRNLYKIQLIDYTKVTCLSCELNPE----R-----CQYYSVSFSKEAKY 429 (740)
T ss_dssp CSSEEEEEESCG------------GG--CTTCBEEEEEETTEEEEEEESSTTTSTT----T-----BCBEEEEECTTSSE
T ss_pred eCCEEEEEEecC------------CC--CCceeEEEEEECCCCCcceeeccccCCC----C-----CceEEEEECCCCCE
Confidence 788888877320 01 123568999999987765 566331 00 0 00113679999999
Q ss_pred EEEEEecCCCCceEEEEECCCCceeEeecCCCC----CCCcCCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEE
Q 002194 598 ILTSKESKTENTQYYIQSWPDKKSCQITDFPHP----YPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCL 673 (954)
Q Consensus 598 l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~----~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~v 673 (954)
+++..+++. |+.+++++..+++..++...+.. +........+.+++ ..+|.++++++++|+++++.+ ++|+|
T Consensus 430 ~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~--~~P~v 505 (740)
T 4a5s_A 430 YQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSK--KYPLL 505 (740)
T ss_dssp EEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTS--CEEEE
T ss_pred EEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCC--CccEE
Confidence 999999987 78899999888877676655432 22233344677777 789999999999999887654 59999
Q ss_pred EEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHH
Q 002194 674 FWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEE 749 (954)
Q Consensus 674 v~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~ 749 (954)
|++|||+..... . ..| ...+...+++ +||+|+++++++..++|..+.. ..+....++|+.+++++
T Consensus 506 v~~HGg~~~~~~-----~---~~~---~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~ 574 (740)
T 4a5s_A 506 LDVYAGPCSQKA-----D---TVF---RLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQ 574 (740)
T ss_dssp EECCCCTTCCCC-----C---CCC---CCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHH
T ss_pred EEECCCCccccc-----c---ccc---CcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHH
Confidence 999998643210 1 111 1123455664 9999999888776665554322 23344678999999999
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccc-cc--hhhhcHHHHHhcCccccc
Q 002194 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-DR--TLWEATSTYVEMSPFMSA 826 (954)
Q Consensus 750 l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~sp~~~~ 826 (954)
|.+++.+|++||+|+||||||++|+++++++|++|+++|+++|+.++......+... .. ..+++.+.|...+|+..+
T Consensus 575 l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 654 (740)
T 4a5s_A 575 FSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRA 654 (740)
T ss_dssp HHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGG
T ss_pred HHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHH
Confidence 998888999999999999999999999999999999999999988754332111110 11 125667788899999999
Q ss_pred CCCCC-CEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcccCC
Q 002194 827 NKLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 827 ~~~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
+++++ |+||+||++|.+|| +.++.+++++|+..++++++++||+++|.+...+...++++.+.+||++++....
T Consensus 655 ~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 729 (740)
T 4a5s_A 655 ENFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPA 729 (740)
T ss_dssp GGGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred hcCCCCcEEEEEcCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcCCCC
Confidence 99997 99999999999999 9999999999999999999999999999986677788899999999999997543
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=5.4e-54 Score=528.93 Aligned_cols=628 Identities=17% Similarity=0.218 Sum_probs=443.2
Q ss_pred hhHHHhhc-----CCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCC
Q 002194 100 PEIREIVD-----APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDG 174 (954)
Q Consensus 100 ~~~~~~~~-----~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g 174 (954)
..+++++. ...+..++|||||++|+|.+.. +++... ..|++|++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~----------------------d~~~~~-----~~i~~~d~~~-- 73 (741)
T 2ecf_A 23 LTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGK----------------------DSDRNQ-----LDLWSYDIGS-- 73 (741)
T ss_dssp CCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECC----------------------SSCTTE-----EEEEEEETTT--
T ss_pred ccHHHHhccCCcCCCCCCCceEecCCCEEEEEecc----------------------CCCCcc-----cEEEEEECCC--
Confidence 34556664 3457789999999999999862 110001 3799999854
Q ss_pred CCCceeeeecCCCC-----------------------CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCC--
Q 002194 175 KLGQEIEIQGFPDG-----------------------AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-- 229 (954)
Q Consensus 175 ~~~~~~~lt~~~~~-----------------------~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g-- 229 (954)
++.+++...... ..+..++|||||++|+|.. ...||++|++++
T Consensus 74 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~----------~~~i~~~d~~~~~~ 141 (741)
T 2ecf_A 74 --GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL----------GGELYLYDLKQEGK 141 (741)
T ss_dssp --CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEE----------TTEEEEEESSSCST
T ss_pred --CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEe----------CCcEEEEECCCCCc
Confidence 455555422111 1268899999999999976 278999999998
Q ss_pred -ceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccc
Q 002194 230 -KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLF 308 (954)
Q Consensus 230 -~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~ 308 (954)
+.++++..... +..++|||||++|++.
T Consensus 142 ~~~~~l~~~~~~-----~~~~~~SPDG~~la~~----------------------------------------------- 169 (741)
T 2ecf_A 142 AAVRQLTHGEGF-----ATDAKLSPKGGFVSFI----------------------------------------------- 169 (741)
T ss_dssp TSCCBCCCSSSC-----EEEEEECTTSSEEEEE-----------------------------------------------
T ss_pred ceEEEcccCCcc-----cccccCCCCCCEEEEE-----------------------------------------------
Confidence 77788765443 6689999999999987
Q ss_pred cccccceEEEEEe-CCceeEcCCC-cc-----------------ccccccCCCCcEEEEEeecCCccc------------
Q 002194 309 DYYATTQLVLVSL-DGTVKEIGPP-AV-----------------YTSLDPSPDEKYILISSIHRPYSF------------ 357 (954)
Q Consensus 309 ~~~~~~~l~~~~~-~G~~~~l~~~-~~-----------------~~~~~~SpDGk~l~~~s~~~~~~~------------ 357 (954)
...+||++++ +|+.++++.. .. ...++|||||++|++.+.+.....
T Consensus 170 ---~~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~ 246 (741)
T 2ecf_A 170 ---RGRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRT 246 (741)
T ss_dssp ---ETTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCE
T ss_pred ---eCCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcc
Confidence 1235999999 7888777764 21 477999999999999876532100
Q ss_pred -----cccc-C--CCCcceEEEeccC-ceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002194 358 -----IVPC-G--RFPRQVGVWTTDG-IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (954)
Q Consensus 358 -----~~~~-~--~~~~~l~l~d~~g-~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (954)
..|. + .....|++||+++ ++.+.+..... ....+..++| |||+.|++......
T Consensus 247 ~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~-pDg~~l~~~~~~~~------- 308 (741)
T 2ecf_A 247 DVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKE----------QDIYLARVNW-RDPQHLSFQRQSRD------- 308 (741)
T ss_dssp EEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSC----------SSEEEEEEEE-EETTEEEEEEEETT-------
T ss_pred cceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCC----------cceEEEEEEe-CCCCEEEEEEeccc-------
Confidence 0000 0 0112788999988 77666543210 1123457899 99999988733211
Q ss_pred ccCCCeEEEEecCCCCCCCceEEeeccc-----ccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCC
Q 002194 429 VTPRDIIYTQQAEPVQGEGPEILHKLDL-----RYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS 503 (954)
Q Consensus 429 ~~~~~~l~~~~~~~~~g~~~~~l~~~~~-----~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 503 (954)
.....|+++++ .+++.+.+..... .+..++|||||+ +++.+..++ ..+||.++.+++ ...++....
T Consensus 309 -~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g-~~~l~~~~~~~~---~~~l~~~~~ 379 (741)
T 2ecf_A 309 -QKKLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG-FQHLYRIDSKGK---AAALTHGNW 379 (741)
T ss_dssp -SSEEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS-SCEEEEECSSSC---EEESCCSSS
T ss_pred -CCeEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC-ccEEEEEcCCCC---eeeeeecce
Confidence 22457999996 5666665543322 346899999999 666655544 378999998763 344443321
Q ss_pred CCccCCCCCCCe-eeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEe
Q 002194 504 EDVYSDPGSPMM-RRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (954)
Q Consensus 504 ~~~~~~~~~~~~-~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 582 (954)
.+.. + .|||||++|+|..... + ....+||.++++++..++|+...+ +.
T Consensus 380 -~v~~------~~~~s~dg~~l~~~~~~~------------~----~~~~~l~~~~~~g~~~~~l~~~~~------~~-- 428 (741)
T 2ecf_A 380 -SVDE------LLAVDEKAGLAYFRAGIE------------S----ARESQIYAVPLQGGQPQRLSKAPG------MH-- 428 (741)
T ss_dssp -CEEE------EEEEETTTTEEEEEECSS------------C----TTCBEEEEEETTCCCCEECCCSCS------EE--
T ss_pred -EEEe------EeEEeCCCCEEEEEEeCC------------C----CceEEEEEEEcCCCCeeecccCCC------ce--
Confidence 1111 3 5999999998887311 0 013458888887777777776332 11
Q ss_pred ccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCC-----CCCCc--CCCceEEEEEEcCCC-eEEEE
Q 002194 583 MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPH-----PYPQL--ASLQKELIKYQRKDG-VQLSA 654 (954)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~-----~~~~~--~~~~~~~~~~~~~~g-~~l~~ 654 (954)
..+|||||+++++..++...|.++++++..++..+.|+..+. .+... .....+.+++++.+| .++++
T Consensus 429 -----~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~ 503 (741)
T 2ecf_A 429 -----SASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNY 503 (741)
T ss_dssp -----EEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEE
T ss_pred -----EEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEE
Confidence 257999999999999999999999999987666666664322 12223 334688999999999 99999
Q ss_pred EEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCccc-HHHHHHHHCCcEEEEcCCCCCCCCCCcccc-
Q 002194 655 TLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGS-TSVLLWLARGFAILGGPTTPIIGEGDEEAN- 732 (954)
Q Consensus 655 ~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~la~~G~~V~~~~~~~~~G~G~~~~~- 732 (954)
+++.|+++++.+ +.|+||++||++..... ...|..... ..+..|+++||+|+.+++++..+.|..+..
T Consensus 504 ~~~~P~~~~~~~--~~p~vv~~hG~~~~~~~--------~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~ 573 (741)
T 2ecf_A 504 SVIKPAGFDPAK--RYPVAVYVYGGPASQTV--------TDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGA 573 (741)
T ss_dssp EEECCSSCCTTS--CEEEEEECCCSTTCCSC--------SSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred EEEeCCCCCCCC--CcCEEEEEcCCCCcccc--------cccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHH
Confidence 999998765443 48999999998633210 011211100 357788999999999666544433322111
Q ss_pred --hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCcc-ccch
Q 002194 733 --DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN-EDRT 809 (954)
Q Consensus 733 --~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-~~~~ 809 (954)
..+....++|+.+++++|.+++.+|+++|+|+||||||++++.+++++|++|+++|+++|+.++......+.. ....
T Consensus 574 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 653 (741)
T 2ecf_A 574 LYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTERYMDL 653 (741)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBHHHHHHHHCC
T ss_pred HhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhccccchhhcCC
Confidence 1223456899999999999998889999999999999999999999999999999999998764322111110 0123
Q ss_pred hhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHH
Q 002194 810 LWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (954)
Q Consensus 810 ~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 889 (954)
++...+.|...+|+..+.++++|+||+||++|.+|| +.++.+++++|+..+++++++++|+++|.+.... ..++++.
T Consensus 654 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~ 730 (741)
T 2ecf_A 654 PARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVL--FTNSTSLMSALQKRGQPFELMTYPGAKHGLSGAD-ALHRYRV 730 (741)
T ss_dssp TGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHH-HHHHHHH
T ss_pred cccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCC--HHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCc-hhHHHHH
Confidence 345567788889999999999999999999999998 9999999999999999999999999999986333 3788899
Q ss_pred HHHHHHHhcc
Q 002194 890 TDRWLQKYCV 899 (954)
Q Consensus 890 i~~fl~~~l~ 899 (954)
+.+||+++|+
T Consensus 731 i~~fl~~~l~ 740 (741)
T 2ecf_A 731 AEAFLGRCLK 740 (741)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999999985
No 3
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=2.4e-53 Score=521.76 Aligned_cols=630 Identities=12% Similarity=0.066 Sum_probs=422.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
....++|||||++++ ...+ +.|++|++.+ ++..++.......
T Consensus 18 ~~~~~~~spdg~~~~-~~~d---------------------------------g~i~~~d~~~----g~~~~~~~~~~~~ 59 (723)
T 1xfd_A 18 HDPEAKWISDTEFIY-REQK---------------------------------GTVRLWNVET----NTSTVLIEGKKIE 59 (723)
T ss_dssp CCCCCCBSSSSCBCC-CCSS---------------------------------SCEEEBCGGG----CCCEEEECTTTTT
T ss_pred cccccEEcCCCcEEE-EeCC---------------------------------CCEEEEECCC----CcEEEEecccccc
Confidence 467899999999554 3332 3789999864 4444443211111
Q ss_pred --cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCC
Q 002194 190 --KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (954)
Q Consensus 190 --~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (954)
.+..++|||||++|+|..........+....||++|+++++.++++..... ...+..++|||||+.|+|.
T Consensus 60 ~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~~~~SPdG~~la~~------ 131 (723)
T 1xfd_A 60 SLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS--NAKLQYAGWGPKGQQLIFI------ 131 (723)
T ss_dssp TTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC--SCCCSBCCBCSSTTCEEEE------
T ss_pred ccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc--cccccccEECCCCCEEEEE------
Confidence 378899999999999987432111122347899999999988777654321 1114579999999999987
Q ss_pred CCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC--ccc----------
Q 002194 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVY---------- 334 (954)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~--~~~---------- 334 (954)
...+||++++ +|+.++++.. ..+
T Consensus 132 --------------------------------------------~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 132 --------------------------------------------FENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY 167 (723)
T ss_dssp --------------------------------------------ETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred --------------------------------------------ECCeEEEEECCCCceEEEecCCCCCceECcccceeE
Confidence 1235889998 7777777654 222
Q ss_pred --------cccccCCCCcEEEEEeecCCcc--ccc----------------c-cC--CCCcceEEEeccCceE-EEeccC
Q 002194 335 --------TSLDPSPDEKYILISSIHRPYS--FIV----------------P-CG--RFPRQVGVWTTDGIFV-RELCDL 384 (954)
Q Consensus 335 --------~~~~~SpDGk~l~~~s~~~~~~--~~~----------------~-~~--~~~~~l~l~d~~g~~~-~~l~~~ 384 (954)
..++|||||++|+|.+.+.... +.. + .+ .....+++||+++++. +.+...
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 5799999999999988653210 000 0 00 1123789999987763 555432
Q ss_pred CCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec--cccc----
Q 002194 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRY---- 458 (954)
Q Consensus 385 ~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~---- 458 (954)
... ......+..++|||||+.++++.... .....|+++++ .+++...+... ...+
T Consensus 248 ~~~-------~~~~~~~~~~~~SpDg~~l~~~~~~~---------~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~ 308 (723)
T 1xfd_A 248 DDP-------RMREYYITMVKWATSTKVAVTWLNRA---------QNVSILTLCDA---TTGVCTKKHEDESEAWLHRQN 308 (723)
T ss_dssp CCG-------GGSSEEEEEEEESSSSEEEEEEEETT---------SCEEEEEEEET---TTCCEEEEEEEECSSCCCCCC
T ss_pred ccC-------CCccceeEEEEEeCCCeEEEEEEcCC---------CCeEEEEEEeC---CCCcceEEEEeccCCEEeccC
Confidence 100 00112345789999999776653321 22457899996 56666555322 2222
Q ss_pred CceeeccCCceEEEE-Eeccc---cceEEEEEc-CCCCCCC---cEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEee
Q 002194 459 GGISWCDDSLALVYE-SWYKT---RRTRTWVIS-PGSKDVA---PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (954)
Q Consensus 459 ~~~~~spDg~~l~~~-~~~~~---~~~~l~~~d-~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~ 530 (954)
..++|||||+.|++. ...++ ...+||+++ .+++ . .+.++...... .. .++|||||++|+|....
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~~l~~~~~~~-~~-----~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS--SNDNIQSITSGDWDV-TK-----ILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS--SSCCCCBSCCSSSCE-EE-----EEEEETTTTEEEEEESS
T ss_pred CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCC--CccceeEeecCCeEE-Ee-----eeEEcCCCCEEEEEEcC
Confidence 379999999999997 44332 146899999 4553 3 34444322111 11 15799999999988721
Q ss_pred ccCCCcEEEEecCCCCCCCCCCeEEEEECCCC-CeEEEecc--CcccccceeEEeccCCccccccccCCEEEEEEecCCC
Q 002194 531 ENDEGTYILLNGNGATPEGNIPFLDLFDINTG-SKERIWES--DKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTE 607 (954)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~ 607 (954)
. .....+||.++++++ +.+.|+.. ... .....+|||||+++++..+++..
T Consensus 381 ~----------------~~~~~~l~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~spdg~~l~~~~~~~~~ 433 (723)
T 1xfd_A 381 D----------------LPRRRQLYSANTVGNFNRQCLSCDLVENC-----------TYFSASFSHSMDFFLLKCEGPGV 433 (723)
T ss_dssp S----------------CTTCCEEEEECSSTTCCCBCSSTTSSSSC-----------CCCEEEECTTSSEEEEECCSSSS
T ss_pred C----------------CCcceEEEEEeCCCCCCcceecccccCCC-----------CeEEEEECCCCCEEEEEccCCCC
Confidence 1 012346888887765 44455432 110 01135799999999999999998
Q ss_pred CceEEEEECCCCceeEeecCCCC----CCCcCCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcC
Q 002194 608 NTQYYIQSWPDKKSCQITDFPHP----YPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKS 683 (954)
Q Consensus 608 p~~l~~~~~~~g~~~~Lt~~~~~----~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~ 683 (954)
|..++. +..+++...+...+.. +........+.+++++.+| ++++++++|+++++.+ ++|+||++||++...
T Consensus 434 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~~~~--~~p~vv~~HG~~~~~ 509 (723)
T 1xfd_A 434 PMVTVH-NTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFTDTT--HYPLLLVVDGTPGSQ 509 (723)
T ss_dssp CCEEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCCSSS--CEEEEEECCCCTTCC
T ss_pred CeEEEE-ECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCCCCC--ccCEEEEEcCCCCcc
Confidence 876654 6555544333222211 1223334567888898899 9999999999875544 599999999986431
Q ss_pred cccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCccc---chhhHHHHHHHHHHHHHHHHHcCCCCCCc
Q 002194 684 KDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---NDRFVEQLVACAEAAVEEVVRRGVAHPSK 760 (954)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~---~~~~~~~~~~D~~~av~~l~~~~~~d~~r 760 (954)
.. . ..|. .......++++||+|+++++++..++|..+. ...+....++|+.+++++|.+++.+|++|
T Consensus 510 ~~-----~---~~~~--~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~ 579 (723)
T 1xfd_A 510 SV-----A---EKFE--VSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTR 579 (723)
T ss_dssp CC-----C---CCCC--CSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEE
T ss_pred cc-----C---cccc--ccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhh
Confidence 10 0 1111 0123445667999999977766555443321 12233467899999999999988889999
Q ss_pred EEEEeeChHHHHHHHHHHhC----CCcccEEEEeccCCCCCCCCCCCccc-cchhhhcHHHHHhcCcccccCCCC-CCEE
Q 002194 761 IAVGGHSYGAFMTANLLAHA----PHLFCCGIARSGAYNRTLTPFGFQNE-DRTLWEATSTYVEMSPFMSANKLK-KPIL 834 (954)
Q Consensus 761 i~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sp~~~~~~~~-~P~L 834 (954)
|+|+||||||++++.++.++ |++|+++|+.+|+.++......+... ...++...+.+...++...+.+++ +|+|
T Consensus 580 i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 659 (723)
T 1xfd_A 580 VAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFL 659 (723)
T ss_dssp EEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEE
T ss_pred EEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCCEE
Confidence 99999999999999999999 99999999999987754321111000 011222333455667778888999 7999
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 835 LVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 835 ii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
|+||++|.+|| +.++.+++++|+..++++++++||+++|.+...+....+++.+.+||+++|+
T Consensus 660 ii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 660 IIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred EEEeCCCCCcC--HhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 99999999999 9999999999999999999999999999986566778889999999998864
No 4
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-51 Score=504.89 Aligned_cols=624 Identities=14% Similarity=0.079 Sum_probs=424.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCC-
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG- 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~- 188 (954)
....++|||||+ +++...+ ++|++|++.+ ++.+++......
T Consensus 17 ~~~~~~~s~dg~-~~~~~~d---------------------------------~~i~~~~~~~----g~~~~~~~~~~~~ 58 (719)
T 1z68_A 17 KTFFPNWISGQE-YLHQSAD---------------------------------NNIVLYNIET----GQSYTILSNRTMK 58 (719)
T ss_dssp CCCCCEESSSSE-EEEECTT---------------------------------SCEEEEESSS----CCEEEEECHHHHH
T ss_pred CCCccEECCCCe-EEEEcCC---------------------------------CCEEEEEcCC----CcEEEEEcccccc
Confidence 455889999995 4444433 4799999854 555666421100
Q ss_pred -CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce---eecccCCCccccccccceeEecCCeEEEEEecC
Q 002194 189 -AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA---RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (954)
Q Consensus 189 -~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~---~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (954)
..+..++|||||++|+|..........++...||++|+++|+. ++++ .. +..++|||||+.|+|+
T Consensus 59 ~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~-----~~~~~~SPDG~~la~~--- 127 (719)
T 1z68_A 59 SVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RP-----IQYLCWSPVGSKLAYV--- 127 (719)
T ss_dssp TTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SS-----BCCEEECSSTTCEEEE---
T ss_pred ccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cc-----cccceECCCCCEEEEE---
Confidence 0278899999999999987532100112357899999999987 5553 21 5689999999999987
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCCc--c--------
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPA--V-------- 333 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~~--~-------- 333 (954)
...+|+++++ +|+.++++..+ .
T Consensus 128 -----------------------------------------------~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 128 -----------------------------------------------YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPD 160 (719)
T ss_dssp -----------------------------------------------ETTEEEEESSTTSCCEECCCCCBTTTEEESSCC
T ss_pred -----------------------------------------------ECCeEEEEeCCCCCcEEEecCCCcCCeEccccc
Confidence 1235888888 77777776431 1
Q ss_pred ----------ccccccCCCCcEEEEEeecCCccc------------------cccc---CCCCcceEEEeccCceEE---
Q 002194 334 ----------YTSLDPSPDEKYILISSIHRPYSF------------------IVPC---GRFPRQVGVWTTDGIFVR--- 379 (954)
Q Consensus 334 ----------~~~~~~SpDGk~l~~~s~~~~~~~------------------~~~~---~~~~~~l~l~d~~g~~~~--- 379 (954)
...++|||||++|+|.+.+..... ..|. .....++++||+++++..
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~ 240 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ 240 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCE
T ss_pred ceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcccee
Confidence 147999999999999886532100 0000 011237889999876542
Q ss_pred EeccCCCcccCCccccccccCccceeeccCCCCceEE-EEeccCCCccccccCCCeEEEEe----cCCCCCCCceEEe--
Q 002194 380 ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYW-AETQDGGDAKVEVTPRDIIYTQQ----AEPVQGEGPEILH-- 452 (954)
Q Consensus 380 ~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~-~~~~~~~~~~~~~~~~~~l~~~~----~~~~~g~~~~~l~-- 452 (954)
.+... ..+.+....+..++|||||+ +++. .+.. .....|++++ + .+++.+.+.
T Consensus 241 ~~~~~-------~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~---------~~~~~l~~~d~~~~~---~~g~~~~~~~~ 300 (719)
T 1z68_A 241 EVPVP-------AMIASSDYYFSWLTWVTDER-VCLQWLKRV---------QNVSVLSICDFREDW---QTWDCPKTQEH 300 (719)
T ss_dssp ECCCC-------HHHHTSCEEEEEEEESSSSE-EEEEEEESS---------TTEEEEEEEEECSSS---SSEECCGGGEE
T ss_pred EccCC-------ccCCCCcceEEEeEEeCCCe-EEEEEeccc---------cCeEEEEEEcccCCC---CCCceEEEEec
Confidence 22210 00001112346789999976 4444 2211 1234688998 5 444444443
Q ss_pred ---ecccccC-----ceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEE
Q 002194 453 ---KLDLRYG-----GISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYV 524 (954)
Q Consensus 453 ---~~~~~~~-----~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l 524 (954)
.....+. .+.|||||+.|++.........+||.++++++ +.+.++..... +.. +.++ ||++|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~lt~~~~~-v~~------~~~~-d~~~i 370 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQITSGKWE-AIN------IFRV-TQDSL 370 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEECSCSSSC-EEE------EEEE-CSSEE
T ss_pred ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEecccCceE-EEE------EEEE-eCCEE
Confidence 2333344 78999999999886544334578999999885 45555543221 221 4456 88988
Q ss_pred EEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC--CeEEEeccCcccccceeEEeccCCccccccccCCEEEEEE
Q 002194 525 IAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG--SKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSK 602 (954)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 602 (954)
+|..... .......+||.++++++ +.++|+..-.. .. . .....+||+|++++++..
T Consensus 371 ~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~---~~-~----~~~~~~~s~dg~~l~~~~ 428 (719)
T 1z68_A 371 FYSSNEF--------------EEYPGRRNIYRISIGSYPPSKKCVTCHLRK---ER-C----QYYTASFSDYAKYYALVC 428 (719)
T ss_dssp EEEESCG--------------GGCTTCBEEEEEECSSSSCCEEESSTTTTT---TT-B----CBEEEEECGGGSSEEEEE
T ss_pred EEEEecC--------------CCCCceEEEEEEeCCCCCCCceeccCccCC---CC-C----ceEEEEECCCCCEEEEEc
Confidence 8887320 00012356899998766 45666532100 00 0 001256899999999998
Q ss_pred ecCCCCceEEEEECCCCceeEeecCCCC----CCCcCCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECC
Q 002194 603 ESKTENTQYYIQSWPDKKSCQITDFPHP----YPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYP 678 (954)
Q Consensus 603 ~s~~~p~~l~~~~~~~g~~~~Lt~~~~~----~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hG 678 (954)
+++..| .++++++.+++..+++..+.. +........+.+++++.+ .++++++++|+++++.+ ++|+||++||
T Consensus 429 s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~~~~~--~~p~vl~~hG 504 (719)
T 1z68_A 429 YGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQFDRSK--KYPLLIQVYG 504 (719)
T ss_dssp CCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTCCSSS--CEEEEEEECC
T ss_pred CCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eEEEEEEEeCCCCCCCC--CccEEEEECC
Confidence 888877 688999888887777665542 233444467889999888 99999999999875443 5899999999
Q ss_pred CCCcCcccCccccCCCCCCCCcccHHHHHHH-HCCcEEEEcCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHHHHcC
Q 002194 679 GEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRG 754 (954)
Q Consensus 679 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l~~~~ 754 (954)
++..... ...| ...+...++ ++||+|+.+++++..+.|..+.. ..+....++|+.+++++|.+++
T Consensus 505 ~~~~~~~--------~~~~---~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 573 (719)
T 1z68_A 505 GPCSQSV--------RSVF---AVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMG 573 (719)
T ss_dssp CTTBCCC--------CCCC---CCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTS
T ss_pred CCCcCcc--------cccc---hhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcC
Confidence 8643210 0111 112344454 69999999777655544433211 2234567899999999999988
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccc-cch--hhhcHHHHHhcCcccccCCCCC
Q 002194 755 VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-DRT--LWEATSTYVEMSPFMSANKLKK 831 (954)
Q Consensus 755 ~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~sp~~~~~~~~~ 831 (954)
.+|++||+|+||||||++|+.++.++|++|+++|+++|+.++......+... .+. .++..+.|...+|...+.++++
T Consensus 574 ~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (719)
T 1z68_A 574 FIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRN 653 (719)
T ss_dssp CEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHHHHCCSSTTTTHHHHHHTCSGGGGGGGTT
T ss_pred CCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccchhhcCCcccccchhhhhhCCHhHHHhcCCC
Confidence 8999999999999999999999999999999999999988754321111000 011 1344566888889899999998
Q ss_pred -CEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 832 -PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 832 -P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
|+||+||++|.+|| +.++.+++++|+..++++++++||+++|.+ ..+....+++.+.+||+++|+
T Consensus 654 ~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 654 VDYLLIHGTADDNVH--FQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp SEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEEeCCCCCcC--HHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhhC
Confidence 89999999999999 999999999999999999999999999998 455678889999999999873
No 5
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=6.3e-51 Score=498.61 Aligned_cols=569 Identities=14% Similarity=0.104 Sum_probs=406.8
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..++|||| +.|+|.. ...||++|+++++.++++..... +..++|||||+.|+++
T Consensus 83 ~v~~~~~spd-~~~~~~~----------~~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~SpdG~~la~~-------- 138 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT----------QGGLVGFDMLARKVTYLFDTNEE-----TASLDFSPVGDRVAYV-------- 138 (706)
T ss_dssp CCEEEEETTT-TEEEEEE----------TTEEEEEETTTTEEEEEECCTTC-----CTTCEECTTSSEEEEE--------
T ss_pred CceeEEECCC-CeEEEEE----------CCEEEEEECCCCceEEccCCccc-----ccCCcCCCCCCEEEEE--------
Confidence 4778999999 8899975 37999999999988888765443 6689999999999987
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C-----CceeEcCCC-cc---------
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-----GTVKEIGPP-AV--------- 333 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~-----G~~~~l~~~-~~--------- 333 (954)
...+|+++++ + |+.++++.. ..
T Consensus 139 ------------------------------------------~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 139 ------------------------------------------RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp ------------------------------------------ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred ------------------------------------------ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 2246899999 7 887777665 22
Q ss_pred ------ccccccCCCCcEEEEEeecCCcccc-----------------ccc---CCCCcceEEEeccCceEEEeccCCCc
Q 002194 334 ------YTSLDPSPDEKYILISSIHRPYSFI-----------------VPC---GRFPRQVGVWTTDGIFVRELCDLPLA 387 (954)
Q Consensus 334 ------~~~~~~SpDGk~l~~~s~~~~~~~~-----------------~~~---~~~~~~l~l~d~~g~~~~~l~~~~~~ 387 (954)
+..+.|||||++|++.+.+...... .|. ......|++||+++++.+.+......
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 3789999999999998743210000 000 01224799999998877666532111
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCC-CceEEeec-cc----ccCce
Q 002194 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE-GPEILHKL-DL----RYGGI 461 (954)
Q Consensus 388 ~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~l~~~-~~----~~~~~ 461 (954)
...+..++|||||+.|++..... . .....|+++++ .++ ..+.+... .. .+..+
T Consensus 257 ----------~~~~~~~~~spdg~~l~~~~~~~--~------~~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 257 ----------EKFLTNLSWSPDENILYVAEVNR--A------QNECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp ----------TCEEEEEEECTTSSEEEEEEECT--T------SCEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSCC
T ss_pred ----------ceeEeeEEEECCCCEEEEEEeCC--C------CCeeEEEEEEC---CCCceeeEEEEccCCCeECccCCc
Confidence 12346799999999888862211 0 12347899996 555 44555322 11 13568
Q ss_pred eecc--CCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEE
Q 002194 462 SWCD--DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYIL 539 (954)
Q Consensus 462 ~~sp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~ 539 (954)
+||| ||+.|+ .+..++ ..+||.++.+++ ....++..... +.. .+.|||||++|+|.....
T Consensus 316 ~~sp~~dg~~l~-~~~~~g-~~~l~~~~~~~~--~~~~l~~~~~~-v~~-----~~~~spdg~~l~~~~~~~-------- 377 (706)
T 2z3z_A 316 TFLPGSNNQFIW-QSRRDG-WNHLYLYDTTGR--LIRQVTKGEWE-VTN-----FAGFDPKGTRLYFESTEA-------- 377 (706)
T ss_dssp EECTTCSSEEEE-EECTTS-SCEEEEEETTSC--EEEECCCSSSC-EEE-----EEEECTTSSEEEEEESSS--------
T ss_pred eeecCCCCEEEE-EEccCC-ccEEEEEECCCC--EEEecCCCCeE-EEe-----eeEEcCCCCEEEEEecCC--------
Confidence 9999 998554 444443 478999997653 33444432211 111 157999999999887211
Q ss_pred EecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002194 540 LNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (954)
Q Consensus 540 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g 619 (954)
. ....+||.+|+++++.++++...+ +. ..+|||||+++++..++...|.+++++++.++
T Consensus 378 ------~--~~~~~l~~~d~~~~~~~~l~~~~~------~~-------~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 378 ------S--PLERHFYCIDIKGGKTKDLTPESG------MH-------RTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp ------C--TTCBEEEEEETTCCCCEESCCSSS------EE-------EEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred ------C--CceEEEEEEEcCCCCceeccCCCc------eE-------EEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 0 013479999999998888874332 11 25799999999999999999999999999888
Q ss_pred ceeEeecCCCCCCCcCCCceEEEEEEcCCC-eEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCC
Q 002194 620 KSCQITDFPHPYPQLASLQKELIKYQRKDG-VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFP 698 (954)
Q Consensus 620 ~~~~Lt~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~ 698 (954)
+.+.++..+ .+........+.+++++.+| .++++++++|+++++.+ ++|+||++|||+..... . ..|.
T Consensus 437 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~--~~p~iv~~HGg~~~~~~-----~---~~~~ 505 (706)
T 2z3z_A 437 SHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAK--KYPVIVYVYGGPHAQLV-----T---KTWR 505 (706)
T ss_dssp EEEEEECC-------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTS--CEEEEEECCCCTTCCCC-----C---SCC-
T ss_pred eEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCC--CccEEEEecCCCCceee-----c---cccc
Confidence 744555432 34444555678899999999 89999999999876544 48999999998643210 0 1121
Q ss_pred CcccHHHHHHHHCCcEEEEcCCCCCCCCCCccc---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 002194 699 RIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (954)
Q Consensus 699 ~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~---~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~ 775 (954)
.....++..|+++||.|+++++++..+.|..+. ...+....++|+.+++++|.+++.+|++|++|+||||||++|+.
T Consensus 506 ~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 585 (706)
T 2z3z_A 506 SSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTN 585 (706)
T ss_dssp ---CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred cCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHH
Confidence 111125778899999999976665544433221 12334567899999999999888889999999999999999999
Q ss_pred HHHhCCCcccEEEEeccCCCCCCCCCCCcc-ccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHH
Q 002194 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQN-EDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (954)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (954)
++.++|++|+++|+++|+.++......+.. ....++...+.|...+|...+.++++|+|++||++|.+|| +++++++
T Consensus 586 ~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~ 663 (706)
T 2z3z_A 586 LMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVV--WQHSLLF 663 (706)
T ss_dssp HHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSC--THHHHHH
T ss_pred HHHhCCCcEEEEEEcCCccchHHHHhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCC--HHHHHHH
Confidence 999999999999999998764322111110 0122345567788889999999999999999999999999 9999999
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
+++|+..+++++++++|+++|.+... ....+++.+.+||+++|
T Consensus 664 ~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 664 LDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 99999999999999999999998644 67788999999999875
No 6
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=7.2e-49 Score=476.64 Aligned_cols=580 Identities=16% Similarity=0.155 Sum_probs=415.1
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccc----cccceeEe--cCCeE-EEEE
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNA----IFDNFVWV--NNSTL-LVCT 261 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~----~~~~~~ws--pDG~~-l~~~ 261 (954)
..+..|+||+ +.++|+..+. +.++...||++ ..+++.++++..+...... .-..+.|+ |||+. |+|+
T Consensus 24 ~~~~~~~~s~--~~~~~~~~~~---~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 24 GRPACVGAVG--DEVWWVAPRP---AEAGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp SCCEEEEEET--TEEEEEEEET---TTTTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred CccceeEEcC--CeEEEEecCc---ccCCcEEEEEE-CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 4688899995 4788887532 23557889998 5678888898765320000 00156677 99999 8887
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeC----CceeEcCC-----C-
Q 002194 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLD----GTVKEIGP-----P- 331 (954)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~----G~~~~l~~-----~- 331 (954)
.. ...+||.++++ |+.++++. .
T Consensus 98 ~~------------------------------------------------~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~ 129 (662)
T 3azo_A 98 HF------------------------------------------------GDQRLYAFEPDAPGGAVPRPLTPVSAVGGG 129 (662)
T ss_dssp BT------------------------------------------------TTCCEEEECTTSTTCCCCEECSCCCCSTTC
T ss_pred EC------------------------------------------------CCCeEEEEcCCCCCCCCCEeccCCccCCCC
Confidence 11 12459999986 77888876 3
Q ss_pred ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC------ceEEEec-cCCCcccCCccccccccCccce
Q 002194 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG------IFVRELC-DLPLAEDIPIAFNSVRKGMRSI 404 (954)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g------~~~~~l~-~~~~~~~~p~~~~~~~~g~~~~ 404 (954)
..+..++|||||++|+|.+.+..... + .....+|++|++++ ++.+.++ ... ..+..+
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~--~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-------------~~~~~~ 193 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEG--P-SDVRRFLAAVPLDGSAAADRSAVRELSDDAH-------------RFVTGP 193 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSS--T-TCEEEEEEEEETTSTTTTCGGGSEESSCSCS-------------SEECCC
T ss_pred ccccCcEECCCCCEEEEEEecccCCC--C-CCceeEEEEEECCCCccccCCceeEEEecCC-------------CcccCc
Confidence 56678999999999999986521000 0 00123899999998 7777776 432 123468
Q ss_pred eeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCC-CC---CceEEeec-ccccCceeeccCCceEEEEEecccc
Q 002194 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GE---GPEILHKL-DLRYGGISWCDDSLALVYESWYKTR 479 (954)
Q Consensus 405 ~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~---~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~ 479 (954)
+|||||+.|+|......+.. -....||++++ + ++ +.+.++.. ...+..+.|||||+ |+|.++.++
T Consensus 194 ~~SpDG~~la~~~~~~~~~~-----~~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~- 263 (662)
T 3azo_A 194 RLSPDGRQAVWLAWDHPRMP-----WEGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTG- 263 (662)
T ss_dssp EECTTSSEEEEEEECTTCCT-----TTCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTS-
T ss_pred eECCCCCEEEEEECCCCCCC-----CCCcEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCC-
Confidence 89999999988743221100 01347999997 4 34 55666654 56678899999999 778776654
Q ss_pred ceEEEEEcCCCCCCCcEEEecCCCCCccCC---CCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEE
Q 002194 480 RTRTWVISPGSKDVAPRILFDRSSEDVYSD---PGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDL 556 (954)
Q Consensus 480 ~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 556 (954)
..+||+++++++ +.+.++..... .... ++...+.|+|||+.++... . ...+||.
T Consensus 264 ~~~l~~~~~~~~--~~~~l~~~~~~-~~~p~w~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~l~~ 320 (662)
T 3azo_A 264 WWNLHRVDPATG--AATQLCRREEE-FAGPLWTPGMRWFAPLANGLIAVVHG-------------------K-GAAVLGI 320 (662)
T ss_dssp SCEEEEECTTTC--CEEESSCCSSB-SSCCCCSTTCCSEEECTTSCEEEEEB-------------------S-SSCEEEE
T ss_pred CeEEEEEECCCC--ceeeccccccc-ccCccccccCceEeEeCCCEEEEEEE-------------------c-CccEEEE
Confidence 368999998775 44555443221 1110 0001134455554333222 1 2456999
Q ss_pred EECCCCCeEEEeccCcccccceeEEeccCCccccc-cccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCCC-CCCc
Q 002194 557 FDINTGSKERIWESDKEKYYETTVALMSDQTEGDL-YLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP-YPQL 634 (954)
Q Consensus 557 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~-~~~~ 634 (954)
+|+++++.++|+...+. +. .+ ++|++.+++...+...|..+|++++.+++.++|+..+.. +...
T Consensus 321 ~d~~~~~~~~l~~~~~~-----~~---------~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~ 386 (662)
T 3azo_A 321 LDPESGELVDAAGPWTE-----WA---------ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPA 386 (662)
T ss_dssp EETTTTEEEECCSSCCE-----EE---------EEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGG
T ss_pred EECCCCcEEEecCCCCe-----EE---------EEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCcc
Confidence 99999988887655422 11 23 778999999999999999999999999999999876543 2333
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCC--CCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCC
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYD--PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG 712 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~--~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G 712 (954)
.....+.+.+++.+|.++++++++|++++ ....+++|+||++||++..... ..| ...++.|+++|
T Consensus 387 ~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~---------~~~----~~~~~~l~~~G 453 (662)
T 3azo_A 387 YYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP---------AVL----DLDVAYFTSRG 453 (662)
T ss_dssp GSCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCC---------CSC----CHHHHHHHTTT
T ss_pred ccCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCc---------ccc----hHHHHHHHhCC
Confidence 33457889999889999999999998754 1112358999999998633211 112 24577889999
Q ss_pred cEEEEcCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEE
Q 002194 713 FAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIA 789 (954)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~ 789 (954)
|+|+.+++++..|+|.++.. ..+....++|+.+++++|.+++.+|++|++|+||||||+++++++.+ |++|+++|+
T Consensus 454 ~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~ 532 (662)
T 3azo_A 454 IGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTV 532 (662)
T ss_dssp CEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEE
T ss_pred CEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEe
Confidence 99999999888889887542 23345678999999999999988999999999999999999999887 899999999
Q ss_pred eccCCCCCCC------CCC--Ccc-ccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHh
Q 002194 790 RSGAYNRTLT------PFG--FQN-EDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG 860 (954)
Q Consensus 790 ~~~~~~~~~~------~~~--~~~-~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~ 860 (954)
.+|+.++... .+. +.. ......+..+.|...+|+.++.++++|+||+||++|.+|| +.++++++++|+.
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~ 610 (662)
T 3azo_A 533 LYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQCDRFLEAVAG 610 (662)
T ss_dssp ESCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHTT
T ss_pred cCCccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCC--HHHHHHHHHHHHH
Confidence 9998763211 000 000 0111124567788889999999999999999999999999 9999999999999
Q ss_pred CCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcccC
Q 002194 861 HGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 861 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
.|++++++++|+++|.+...++...+++.+++||.++++..
T Consensus 611 ~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 611 CGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp SCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999998766777889999999999998654
No 7
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=5.5e-49 Score=469.74 Aligned_cols=538 Identities=16% Similarity=0.140 Sum_probs=397.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..++|||||++|||.+. .++..+||.+ ++|+.+++|...... +..+.|||| ++++.+ ....+.
T Consensus 23 ~~~~~~~~~DG~~la~~s~------~~g~~~lw~~--~~g~~~~lt~~~~~~----~~~~~~spd-~~l~~~-~~~~g~- 87 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGF------SEGSVNAYLY--DGGETVKLNREPINS----VLDPHYGVG-RVILVR-DVSKGA- 87 (582)
T ss_dssp CEEEEEEEETTTEEEEEEE------ETTEEEEEEE--ETTEEEECCSSCCSE----ECEECTTCS-EEEEEE-ECSTTS-
T ss_pred chheeecCCCCCeEEEEEc------cCCceeEEEE--cCCCcEeeecccccc----cccccCCCC-eEEEEe-ccCCCC-
Confidence 4778899999999999875 3467888886 688999998766322 668999999 655543 110000
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe--CCceeEcCCCccccccccCCCCcEEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIGPPAVYTSLDPSPDEKYIL 347 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~--~G~~~~l~~~~~~~~~~~SpDGk~l~ 347 (954)
...+||.+++ +|...+++........+|||||+.++
T Consensus 88 ------------------------------------------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 88 ------------------------------------------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVV 125 (582)
T ss_dssp ------------------------------------------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEE
T ss_pred ------------------------------------------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEE
Confidence 2246899998 77666777664445679999999998
Q ss_pred EEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccc
Q 002194 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (954)
Q Consensus 348 ~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~ 427 (954)
|.+.... .+.+||+++++.++++..+. .+++|||||+.|++.....
T Consensus 126 ~~s~~~~------------~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~la~~~~~~------- 171 (582)
T 3o4h_A 126 FTGATED------------RVALYALDGGGLRELARLPG---------------FGFVSDIRGDLIAGLGFFG------- 171 (582)
T ss_dssp EEEECSS------------CEEEEEEETTEEEEEEEESS---------------CEEEEEEETTEEEEEEEEE-------
T ss_pred EEecCCC------------CceEEEccCCcEEEeecCCC---------------ceEEECCCCCEEEEEEEcC-------
Confidence 8875432 56699999988888775331 4788999999998873322
Q ss_pred cccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCcc
Q 002194 428 EVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVY 507 (954)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~ 507 (954)
.....||++++ ++++.+.|+.....+..++|||||+.|+ .+..++ ..+||++|++++ +.+ ++......+.
T Consensus 172 --~~~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~~-~~~i~~~d~~~~--~~~-~~~~~~~~~~ 241 (582)
T 3o4h_A 172 --GGRVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTA-GLETAR-EARLVTVDPRDG--SVE-DLELPSKDFS 241 (582)
T ss_dssp --TTEEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEE-EEECSS-CEEEEEECTTTC--CEE-ECCCSCSHHH
T ss_pred --CCCeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEE-EccCCC-eeEEEEEcCCCC--cEE-EccCCCcChh
Confidence 12246999996 7778888888877788999999999999 333332 368999999986 334 4333222222
Q ss_pred CCCCCCCee--------eccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccccccee
Q 002194 508 SDPGSPMMR--------RTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (954)
Q Consensus 508 ~~~~~~~~~--------~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 579 (954)
. +. ||||| .+++.... ...+.+|++ |+..+ + ..+ .+
T Consensus 242 ~------~~~~~~~~~~~spdg-~~~~~~~~--------------------~g~~~l~~~--g~~~~-~-~~~-----~v 285 (582)
T 3o4h_A 242 S------YRPTAITWLGYLPDG-RLAVVARR--------------------EGRSAVFID--GERVE-A-PQG-----NH 285 (582)
T ss_dssp H------HCCSEEEEEEECTTS-CEEEEEEE--------------------TTEEEEEET--TEEEC-C-CSS-----EE
T ss_pred h------hhhccccceeEcCCC-cEEEEEEc--------------------CCcEEEEEE--CCeec-c-CCC-----ce
Confidence 2 45 99999 66665522 123667777 54332 1 111 11
Q ss_pred EEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCCCCCC---cCCCceEEEEEEcCCCeEEEEEE
Q 002194 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQ---LASLQKELIKYQRKDGVQLSATL 656 (954)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~---~~~~~~~~~~~~~~~g~~l~~~l 656 (954)
. ..+|| |+ .+++..++...|.++|+++..+ +.++| .+.. ......+.+++++.+|.++++++
T Consensus 286 ~-------~~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~-~~~~l-----~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 350 (582)
T 3o4h_A 286 G-------RVVLW-RG-KLVTSHTSLSTPPRIVSLPSGE-PLLEG-----GLPEDLRRSIAGSRLVWVESFDGSRVPTYV 350 (582)
T ss_dssp E-------EEEEE-TT-EEEEEEEETTEEEEEEEETTCC-EEECC-----CCCHHHHHTEEEEEEEEEECTTSCEEEEEE
T ss_pred E-------EEEec-CC-EEEEEEcCCCCCCeEEEEcCCC-ceEEE-----ecCCccccccCcceEEEEECCCCCEEEEEE
Confidence 1 24678 66 4567788888899999999755 55555 2222 44456789999999999999999
Q ss_pred EcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---h
Q 002194 657 YLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---D 733 (954)
Q Consensus 657 ~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~ 733 (954)
+.|+++.+ +.|+||++||+++.... ..| ...++.|+++||+|+.+++++..|+|.++.. .
T Consensus 351 ~~p~~~~~----~~p~vv~~HG~~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~ 413 (582)
T 3o4h_A 351 LESGRAPT----PGPTVVLVHGGPFAEDS---------DSW----DTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG 413 (582)
T ss_dssp EEETTSCS----SEEEEEEECSSSSCCCC---------SSC----CHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTT
T ss_pred EcCCCCCC----CCcEEEEECCCcccccc---------ccc----CHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhh
Confidence 99987533 48999999998643210 112 2467789999999999998888888887542 3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCcc-----ccc
Q 002194 734 RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN-----EDR 808 (954)
Q Consensus 734 ~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-----~~~ 808 (954)
.+....++|+.++++++.+++.+| +++|+||||||++|+.++.++|++|+++|+++|+.++......... ...
T Consensus 414 ~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (582)
T 3o4h_A 414 DPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQ 491 (582)
T ss_dssp CTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHH
Confidence 445677899999999999998787 9999999999999999999999999999999998763210000000 000
Q ss_pred hhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHH
Q 002194 809 TLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (954)
Q Consensus 809 ~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 888 (954)
...+..+.+...+|+.++.++++|+|++||++|.+|| +.++++++++|+..|++++++++|+++|.+...+...++++
T Consensus 492 ~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~ 569 (582)
T 3o4h_A 492 LTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTP--LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILL 569 (582)
T ss_dssp HTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHH
T ss_pred HcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcC--HHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHH
Confidence 1114567788899999999999999999999999999 99999999999999999999999999999876677788999
Q ss_pred HHHHHHHHhccc
Q 002194 889 ETDRWLQKYCVS 900 (954)
Q Consensus 889 ~i~~fl~~~l~~ 900 (954)
.+.+||+++|+.
T Consensus 570 ~i~~fl~~~l~~ 581 (582)
T 3o4h_A 570 PAVFFLATQRER 581 (582)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 999999999853
No 8
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=2.7e-47 Score=465.47 Aligned_cols=584 Identities=12% Similarity=0.096 Sum_probs=405.8
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCc--cccccccceeEecCCeEEEEEecCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
+..| +|||++++|..... +.....||+++..+++.+.+++.... .....+..++|||||++|+|+......
T Consensus 76 ~~~p--~~dG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~- 148 (710)
T 2xdw_A 76 YSCH--FKKGKRYFYFYNTG----LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS- 148 (710)
T ss_dssp ECCC--EEETTEEEEEEECS----SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC-
T ss_pred CCCC--EEECCEEEEEEEcC----CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC-
Confidence 4445 49999999988532 33455899999888877755432210 001125689999999999998221000
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-ccccccccCCCCcEE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l 346 (954)
...+|+++|+ +|+...++.. ..+.+++|||||+.|
T Consensus 149 -------------------------------------------~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l 185 (710)
T 2xdw_A 149 -------------------------------------------DWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGM 185 (710)
T ss_dssp -------------------------------------------SCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEE
T ss_pred -------------------------------------------ceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEE
Confidence 1236999999 8877665433 346789999999999
Q ss_pred EEEeecCCcc---cccccCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002194 347 LISSIHRPYS---FIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 347 ~~~s~~~~~~---~~~~~~~~~~~l~l~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~ 421 (954)
+|++...+.. ...+......+|++|++.+++. +.+...+.. ......+.|||||+.|++......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~----------~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----------PKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC----------CeEEEEEEEcCCCCEEEEEEEccC
Confidence 9998654310 0001112345799999986542 222221110 012346889999999888743210
Q ss_pred CCCccccccCCCeEEEEecCCCCC------C--CceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCC
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQG------E--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g------~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (954)
+....||++++ ++ + ..+.++...... ...|+|||+.|++.++.+..+.+|+.++++++..
T Consensus 256 --------~~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 256 --------DPVNRLWYCDL---QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp --------SSCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred --------CCccEEEEEEC---cccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 11458999996 33 3 466776554433 3469999999999988765457899999987521
Q ss_pred -CcEEEecCCCC-CccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCC-eEEEecc
Q 002194 494 -APRILFDRSSE-DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS-KERIWES 570 (954)
Q Consensus 494 -~~~~l~~~~~~-~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~ 570 (954)
..+.++..... .+.+ +.|++++ .+++..... ...+|+++|+.+|+ .+.|...
T Consensus 324 ~~~~~l~~~~~~~~~~~------~~~~~~~-~lv~~~~~~------------------g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 324 SKWKVLVPEHEKDVLEW------VACVRSN-FLVLCYLHD------------------VKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp GGCEEEECCCSSCEEEE------EEEETTT-EEEEEEEET------------------TEEEEEEEETTTCCEEEEECCC
T ss_pred ccceeccCCCCCCeEEE------EEEEcCC-EEEEEEEEC------------------CEEEEEEEECCCCCEEEecCCC
Confidence 12444433221 2222 5677544 444444211 23469999996665 4556543
Q ss_pred CcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCc--eeEeecCCCCCCCcCCCceEEEEEEcCC
Q 002194 571 DKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK--SCQITDFPHPYPQLASLQKELIKYQRKD 648 (954)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~--~~~Lt~~~~~~~~~~~~~~~~~~~~~~~ 648 (954)
.+. +.. .++++|++.+++..++...|..+|++++.+++ .+.+........+...+..+.+++++.|
T Consensus 379 ~~~-----v~~-------~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d 446 (710)
T 2xdw_A 379 VGS-----VVG-------YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKD 446 (710)
T ss_dssp SSE-----EEE-------EECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTT
T ss_pred Cce-----EEE-------EecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCC
Confidence 221 111 35788999999999999999999999998888 6667654322123345678999999999
Q ss_pred CeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCCC
Q 002194 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEG 727 (954)
Q Consensus 649 g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G 727 (954)
|.+|++++++|+++... ++.|+||++|||+...... .|. .....|++ +||+|+.+++++..++|
T Consensus 447 g~~i~~~~~~p~~~~~~--~~~P~vl~~hGg~~~~~~~---------~~~----~~~~~l~~~~G~~v~~~d~rG~g~~g 511 (710)
T 2xdw_A 447 GTKIPMFIVHKKGIKLD--GSHPAFLYGYGGFNISITP---------NYS----VSRLIFVRHMGGVLAVANIRGGGEYG 511 (710)
T ss_dssp SCEEEEEEEEETTCCCS--SCSCEEEECCCCTTCCCCC---------CCC----HHHHHHHHHHCCEEEEECCTTSSTTH
T ss_pred CCEEEEEEEecCCCCCC--CCccEEEEEcCCCCCcCCC---------ccc----HHHHHHHHhCCcEEEEEccCCCCCCC
Confidence 99999999999886443 3589999999986432110 111 23457788 99999998888777776
Q ss_pred Ccccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCC--
Q 002194 728 DEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-- 802 (954)
Q Consensus 728 ~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~-- 802 (954)
..+.. .......++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+|+|+.+|+.++......
T Consensus 512 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~ 591 (710)
T 2xdw_A 512 ETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTI 591 (710)
T ss_dssp HHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT
T ss_pred hHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCC
Confidence 55332 2334567899999999999999999999999999999999999999999999999999999875432110
Q ss_pred ---Cccccch--hhhcHHHHHhcCcccccC-----CCCC-CEEEEEeCCCCCCCCchHHHHHHHHHHHhC-------CCc
Q 002194 803 ---FQNEDRT--LWEATSTYVEMSPFMSAN-----KLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGH-------GAL 864 (954)
Q Consensus 803 ---~~~~~~~--~~~~~~~~~~~sp~~~~~-----~~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~-------g~~ 864 (954)
+..+.+. ..+..+.+..++|+.++. +++. |+||+||++|.+|| +.++.+++++|+.. |.+
T Consensus 592 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~ 669 (710)
T 2xdw_A 592 GHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQYIVGRSRKQNNP 669 (710)
T ss_dssp GGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHHHTTTSTTCCSC
T ss_pred ChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccC--hhHHHHHHHHHHhhhccccCCCcC
Confidence 0000000 112234566789999998 7886 99999999999999 99999999999987 899
Q ss_pred EEEEEeCCCCCcCCCc-ccHHHHHHHHHHHHHHhccc
Q 002194 865 CRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 865 ~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l~~ 900 (954)
+++++++++||++... ....+.+..+++||.++++.
T Consensus 670 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 670 LLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp EEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999998654 23567888999999999854
No 9
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=3.7e-47 Score=462.78 Aligned_cols=581 Identities=14% Similarity=0.084 Sum_probs=403.8
Q ss_pred eeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCc--cccccccceeEecCCeEEEEEecCCCCCCCC
Q 002194 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (954)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~ 271 (954)
+..+|||++|+|.+... +.....||+++.++++.++|+..... .....+..++|||||++|+|+......
T Consensus 73 ~~p~~dG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~---- 144 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHK----DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA---- 144 (695)
T ss_dssp CCCEEETTEEEEEEECT----TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC----
T ss_pred CCCEEECCEEEEEEEcC----CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC----
Confidence 34459999999988532 33468899999988888888764321 001125689999999999998321100
Q ss_pred CCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCC-C-ccccccccCCCCcEEEE
Q 002194 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-P-AVYTSLDPSPDEKYILI 348 (954)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~-~-~~~~~~~~SpDGk~l~~ 348 (954)
...+|+++|+ +|+...... . ....+++|||||+.|+|
T Consensus 145 ----------------------------------------~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~ 184 (695)
T 2bkl_A 145 ----------------------------------------DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYY 184 (695)
T ss_dssp ----------------------------------------SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEE
T ss_pred ----------------------------------------ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEE
Confidence 1246999999 776541111 1 22378999999999999
Q ss_pred EeecCCcccccccCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 349 ~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
++.+.+............+|++|++.++.. +.+...+.. ......+.|||||+.|++.....
T Consensus 185 ~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~------ 248 (695)
T 2bkl_A 185 EWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD----------PTTFLQSDLSRDGKYLFVYILRG------ 248 (695)
T ss_dssp EECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC----------TTCEEEEEECTTSCCEEEEEEET------
T ss_pred EEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC----------CEEEEEEEECCCCCEEEEEEeCC------
Confidence 986543100000011234799999986542 333332111 01234688999999998873221
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCC-CcEEEecCC-CC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV-APRILFDRS-SE 504 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~l~~~~-~~ 504 (954)
.....||+++. .+++.+.|+........+.| +||+ |++.++.+....+|+.++++++.. ..+.++... ..
T Consensus 249 ---~~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 320 (695)
T 2bkl_A 249 ---WSENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA 320 (695)
T ss_dssp ---TTEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC
T ss_pred ---CCceEEEEEcC---CCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC
Confidence 02447888874 55677888766555556666 7888 888877554457899999987521 124444332 11
Q ss_pred CccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEecc
Q 002194 505 DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMS 584 (954)
Q Consensus 505 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 584 (954)
.+.+ ++|+ +..+++.... ....+|++++++++..+.+...... ..
T Consensus 321 ~l~~------~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~-----~v---- 365 (695)
T 2bkl_A 321 SLLS------VSIV--GGHLSLEYLK------------------DATSEVRVATLKGKPVRTVQLPGVG-----AA---- 365 (695)
T ss_dssp EEEE------EEEE--TTEEEEEEEE------------------TTEEEEEEEETTCCEEEECCCSSSS-----EE----
T ss_pred eEEE------EEEE--CCEEEEEEEE------------------CCEEEEEEEeCCCCeeEEecCCCCe-----EE----
Confidence 1111 4455 3344444421 1234689999876655555433211 01
Q ss_pred CCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCCCCCCcCCCceEEEEEEcCCCeEEEEEEEcCCCCCC
Q 002194 585 DQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDP 664 (954)
Q Consensus 585 ~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~ 664 (954)
...++++|++.+++..++...|..+|++++.+++.+.|+..+.. .+...+..+.+++++.||.+|+++++.|+++..
T Consensus 366 --~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~ 442 (695)
T 2bkl_A 366 --SNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDLKR 442 (695)
T ss_dssp --CCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTCCC
T ss_pred --EEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCCCC
Confidence 12467899999999999999999999999999988888765433 233446789999999999999999999988644
Q ss_pred CCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---hhhHHHHHH
Q 002194 665 SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVA 741 (954)
Q Consensus 665 ~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~ 741 (954)
. ++.|+||++|||+...... .|. .....|+++||+|+.+++++..++|..+.. .......++
T Consensus 443 ~--~~~p~vl~~hGg~~~~~~~---------~~~----~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~ 507 (695)
T 2bkl_A 443 D--GNAPTLLYGYGGFNVNMEA---------NFR----SSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFD 507 (695)
T ss_dssp S--SCCCEEEECCCCTTCCCCC---------CCC----GGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred C--CCccEEEEECCCCccccCC---------CcC----HHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHH
Confidence 3 3589999999986432211 121 123468899999999888888778766432 234566789
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCC-Cccccchhh------hcH
Q 002194 742 CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-FQNEDRTLW------EAT 814 (954)
Q Consensus 742 D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~-~~~~~~~~~------~~~ 814 (954)
|+.+++++|++++++|++||+|+|+||||+++++++.++|++|+|+|+.+|+.++...... ........| +..
T Consensus 508 D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~ 587 (695)
T 2bkl_A 508 DFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDF 587 (695)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHH
T ss_pred HHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999885432100 000000011 123
Q ss_pred HHHHhcCcccccCCCC--CCEEEEEeCCCCCCCCchHHHHHHHHHHHh---CCCcEEEEEeCCCCCcCCC-cccHHHHHH
Q 002194 815 STYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQSDRFFNALKG---HGALCRLVILPFESHGYAA-RESIMHVLW 888 (954)
Q Consensus 815 ~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~-~~~~~~~~~ 888 (954)
+.+..++|+.++.+++ +|+||+||++|.+|| +.++.+++++|+. .|.++++++++++||++.. .....+.+.
T Consensus 588 ~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 665 (695)
T 2bkl_A 588 KTLHAYSPYHHVRPDVRYPALLMMAADHDDRVD--PMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSV 665 (695)
T ss_dssp HHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSC--THHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHH
T ss_pred HHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHH
Confidence 4456789999998876 699999999999999 9999999999998 6789999999999999854 344567788
Q ss_pred HHHHHHHHhcccC
Q 002194 889 ETDRWLQKYCVSN 901 (954)
Q Consensus 889 ~i~~fl~~~l~~~ 901 (954)
.+++||.++|+..
T Consensus 666 ~~~~fl~~~l~~~ 678 (695)
T 2bkl_A 666 DLYSFLFQVLDVQ 678 (695)
T ss_dssp HHHHHHHHHTTC-
T ss_pred HHHHHHHHHcCCC
Confidence 8999999998643
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=3.8e-46 Score=452.50 Aligned_cols=576 Identities=13% Similarity=0.092 Sum_probs=401.2
Q ss_pred eecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCC---ccccccccceeEecCCeEEEEEecCCCCCCCC
Q 002194 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD---IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (954)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~---~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~ 271 (954)
..+++|.+++|..... .....-+|+...+++.. .|.+... .. ...+..+.|||||++|+|+......
T Consensus 83 ~p~~~g~~~y~~~~~~----~~~~~~~~r~~~~~~~~-vllD~n~la~~~-~~~l~~~~~SpDg~~lAy~~~~~G~---- 152 (693)
T 3iuj_A 83 APFREGRYHYFFKNDG----LQNQNVLWRQQEGKPAE-VFLDPNTLSPDG-TTALDQLSFSRDGRILAYSLSLAGS---- 152 (693)
T ss_dssp CCEEETTEEEEEEECS----SCSSCEEEEECTTSCCE-EEECGGGGSTTS-CCEEEEEEECTTSSEEEEEEECSSC----
T ss_pred CCEEECCEEEEEEEcC----CCceeEEEEeCCCCCcE-EEEehhhccCCC-cEEEEEEEECCCCCEEEEEEecCCC----
Confidence 3357899999877522 33445677766554443 2322111 11 1125678999999999998321110
Q ss_pred CCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCCc-cccccccCCCCcEEEEE
Q 002194 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPA-VYTSLDPSPDEKYILIS 349 (954)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~~-~~~~~~~SpDGk~l~~~ 349 (954)
....|+++|+ +|+........ ...+++|| ||+.|+|+
T Consensus 153 ----------------------------------------~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 153 ----------------------------------------DWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYS 191 (693)
T ss_dssp ----------------------------------------CEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEE
T ss_pred ----------------------------------------ceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEE
Confidence 1256999999 88765553332 25789999 99999999
Q ss_pred eecCCcccccccCCCCcceEEEeccCce--EEEeccCCC-cccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPL-AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 350 s~~~~~~~~~~~~~~~~~l~l~d~~g~~--~~~l~~~~~-~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
+...+............+|++|++.+.. .+.+...+. .. ....++.|||||+.|++.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~----------~~~~~~~~SpDg~~l~~~~~~~------ 255 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH----------HRYVGATVTEDDRFLLISAANS------ 255 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC----------CSEEEEEECTTSCEEEEEEESS------
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC----------eEEEEEEEcCCCCEEEEEEccC------
Confidence 8664311111111234579999987543 234443221 00 1224678999999888873321
Q ss_pred ccccCCCeEEEEecCCCCCC--CceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCC-CcEEEecCCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGE--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV-APRILFDRSS 503 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~l~~~~~ 503 (954)
.....||++++ +++ +.+.++........+ |+++|+.|+|.++.+..+.+|+.++++++.. ..+.++....
T Consensus 256 ---~~~~~i~~~d~---~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 328 (693)
T 3iuj_A 256 ---TSGNRLYVKDL---SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ 328 (693)
T ss_dssp ---SSCCEEEEEET---TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred ---CCCcEEEEEEC---CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC
Confidence 12358999996 433 567776554433333 8999999999988765568899999988632 1244443322
Q ss_pred CCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEec
Q 002194 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALM 583 (954)
Q Consensus 504 ~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 583 (954)
.. +.|+++|++|++..... ...+|+++|++++..+.|...... .+.
T Consensus 329 ~~---------~~~s~~g~~lv~~~~~~------------------g~~~l~~~d~~g~~~~~l~~p~~~----~~~--- 374 (693)
T 3iuj_A 329 QV---------LTVHSGSGYLFAEYMVD------------------ATARVEQFDYEGKRVREVALPGLG----SVS--- 374 (693)
T ss_dssp SC---------EEEEEETTEEEEEEEET------------------TEEEEEEECTTSCEEEEECCSSSS----EEE---
T ss_pred CE---------EEEEEECCEEEEEEEEC------------------CeeEEEEEECCCCeeEEeecCCCc----eEE---
Confidence 21 36899999999887432 234699999998877777544321 111
Q ss_pred cCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCCCCCCcCCCceEEEEEEcCCCeEEEEEEEcCCCCC
Q 002194 584 SDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYD 663 (954)
Q Consensus 584 ~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~ 663 (954)
..++++|++.+++..++...|..+|.+++.+++.+.|+..+..+ +...+..+.+++++.||.+|++++++|+++.
T Consensus 375 ----~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~ 449 (693)
T 3iuj_A 375 ----GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAPF-KPEDYVSEQRFYQSKDGTRVPLIISYRKGLK 449 (693)
T ss_dssp ----ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSSC-CGGGEEEEEEEEECTTSCEEEEEEEEESSCC
T ss_pred ----eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCCc-ChhhCeeEEEEEecCCCcEEEEEEEecCCCC
Confidence 24567899999999999999999999999999888888765432 2345678999999999999999999998764
Q ss_pred CCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---hhhHHHHH
Q 002194 664 PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLV 740 (954)
Q Consensus 664 ~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~ 740 (954)
.. ++.|+||++|||+..... ..| ......|+++||+|+.+++++..++|..+.. .......+
T Consensus 450 ~~--~~~P~ll~~hGg~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 514 (693)
T 3iuj_A 450 LD--GSNPTILYGYGGFDVSLT---------PSF----SVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVF 514 (693)
T ss_dssp CS--SCCCEEEECCCCTTCCCC---------CCC----CHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHH
T ss_pred CC--CCccEEEEECCCCCcCCC---------Ccc----CHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcH
Confidence 43 358999999998533211 112 1345688999999999999888888766432 23445678
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCcc------ccchhh--h
Q 002194 741 ACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN------EDRTLW--E 812 (954)
Q Consensus 741 ~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~------~~~~~~--~ 812 (954)
+|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+|+|+.+|++|+..... +.. +.+.+. +
T Consensus 515 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~-~~~~~~~~~~~g~p~~~~ 593 (693)
T 3iuj_A 515 DDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT-FTAGTGWAYDYGTSADSE 593 (693)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG-SGGGGGCHHHHCCTTSCH
T ss_pred HHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc-CCCchhHHHHcCCccCHH
Confidence 9999999999999999999999999999999999999999999999999999988543211 100 001111 1
Q ss_pred c-HHHHHhcCcccccCC-CCCC-EEEEEeCCCCCCCCchHHHHHHHHHHHhC---CCcEEEEEeCCCCCcCCCc-ccHHH
Q 002194 813 A-TSTYVEMSPFMSANK-LKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGH---GALCRLVILPFESHGYAAR-ESIMH 885 (954)
Q Consensus 813 ~-~~~~~~~sp~~~~~~-~~~P-~Lii~G~~D~~v~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~H~~~~~-~~~~~ 885 (954)
. .+.+..++|+.++.+ +++| +||+||++|.+|| +.++.+++++|+.. |+++++++++++||++... ....+
T Consensus 594 ~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 671 (693)
T 3iuj_A 594 AMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVV--PAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIE 671 (693)
T ss_dssp HHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSC--THHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHH
T ss_pred HHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCC--hhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHH
Confidence 1 234667899999999 8998 9999999999999 99999999999987 5899999999999998653 45667
Q ss_pred HHHHHHHHHHHhcccC
Q 002194 886 VLWETDRWLQKYCVSN 901 (954)
Q Consensus 886 ~~~~i~~fl~~~l~~~ 901 (954)
.+..+++||.++|+..
T Consensus 672 ~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 672 QSADIYAFTLYEMGYR 687 (693)
T ss_dssp HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCC
Confidence 8889999999998754
No 11
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=7.1e-46 Score=454.61 Aligned_cols=580 Identities=14% Similarity=0.088 Sum_probs=393.0
Q ss_pred eecCCCCeEEEEEeeccccCCCCceEEEEEECC---CCceeecccCCCc--cccccccceeEecCCeEEEEEecCCCCCC
Q 002194 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD---TGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~---~g~~~~lt~~~~~--~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
..+|||++++|.+... +.....||+++.. +++.+.|++.... .....+..+.|||||++|+|+......
T Consensus 113 ~p~pdG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~-- 186 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSG----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS-- 186 (741)
T ss_dssp CCEEETTEEEEEEECS----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC--
T ss_pred CCEEECCEEEEEEEcC----CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC--
Confidence 4459999999988633 3336899999987 7777776432210 000125689999999999998321000
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYIL 347 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~ 347 (954)
...+|+++|+ +|+....... ..+.+++|||| +.|+
T Consensus 187 ------------------------------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 187 ------------------------------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALL 223 (741)
T ss_dssp ------------------------------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEE
T ss_pred ------------------------------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEE
Confidence 1246999999 7876554322 33468999999 9999
Q ss_pred EEeecCCcc-cccccCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 348 ISSIHRPYS-FIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 348 ~~s~~~~~~-~~~~~~~~~~~l~l~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
|++...+.. ..........+|++|++.++.. +.+...+.. ......+.|||||+.|++......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~~--- 290 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL----------PKRGHGASVSSDGRWVVITSSEGT--- 290 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECTT---
T ss_pred EEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC----------CeEEEEEEECCCCCEEEEEEEccC---
Confidence 998654310 0001122345799999875542 233222110 012346889999999988743211
Q ss_pred ccccccCCCeEEEEecCCCCCC--C-ceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGE--G-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~--~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 501 (954)
+....||++++ +++ + .+.|.........+ ++|||+.|++.++.+..+.+|+.++++++..+.+.++..
T Consensus 291 -----~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~ 361 (741)
T 1yr2_A 291 -----DPVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE 361 (741)
T ss_dssp -----CSCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC
T ss_pred -----CCcceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC
Confidence 12458999996 554 5 67776554433344 569999999998876556889999988741123444433
Q ss_pred CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEE
Q 002194 502 SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVA 581 (954)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 581 (954)
....+.+ ++|+ +..+++..... ...+|++++++++..+.|...... .+.
T Consensus 362 ~~~~l~~------~~~~--~~~lv~~~~~d------------------g~~~l~~~~~~g~~~~~l~~~~~~----~v~- 410 (741)
T 1yr2_A 362 SKDNLES------VGIA--GNRLFASYIHD------------------AKSQVLAFDLDGKPAGAVSLPGIG----SAS- 410 (741)
T ss_dssp CSSEEEE------EEEE--BTEEEEEEEET------------------TEEEEEEEETTSCEEEECBCSSSC----EEE-
T ss_pred CCCeEEE------EEEE--CCEEEEEEEEC------------------CEEEEEEEeCCCCceeeccCCCCe----EEE-
Confidence 2221111 3333 45555554221 245699999877666666533211 111
Q ss_pred eccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCCCCCCcCCCceEEEEEEcCCCeEEEEEEEcCCC
Q 002194 582 LMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPG 661 (954)
Q Consensus 582 ~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~ 661 (954)
..++++|++.+++..++...|..+|++++.+++.+.|+... ...+...+..+.+++++.||.+|+++++.|++
T Consensus 411 ------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~-~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~ 483 (741)
T 1yr2_A 411 ------GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVH-LTFDPADFRVEQVFYPSKDGTKVPMFIVRRKD 483 (741)
T ss_dssp ------EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCC-CSSCGGGEEEEEEEEECTTSCEEEEEEEEETT
T ss_pred ------EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCC-CCCChhHCEEEEEEEEcCCCCEEEEEEEecCC
Confidence 24678899999999999999999999999988877776522 22233456789999999999999999999987
Q ss_pred CCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---hhhHHH
Q 002194 662 YDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQ 738 (954)
Q Consensus 662 ~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~ 738 (954)
+ +++.|+||++|||+...... .| ......|+++||+|+.+++++..++|..+.. ..+...
T Consensus 484 ~----~~~~p~vl~~hGg~~~~~~~---------~~----~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~ 546 (741)
T 1yr2_A 484 A----KGPLPTLLYGYGGFNVALTP---------WF----SAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQN 546 (741)
T ss_dssp C----CSCCCEEEECCCCTTCCCCC---------CC----CHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHH
T ss_pred C----CCCCcEEEEECCCCCccCCC---------Cc----CHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCC
Confidence 5 23589999999986432110 12 1345578899999999888877777655432 223346
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCC-Cc----cccchh--h
Q 002194 739 LVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-FQ----NEDRTL--W 811 (954)
Q Consensus 739 ~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~-~~----~~~~~~--~ 811 (954)
.++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++...... .. .+.+.+ .
T Consensus 547 ~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~ 626 (741)
T 1yr2_A 547 VFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEKE 626 (741)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTSH
T ss_pred cHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCCCH
Confidence 6899999999999999999999999999999999999999999999999999999875431100 00 000111 1
Q ss_pred hcHHHHHhcCcccccCC-CCC-CEEEEEeCCCCCCCCchHHHHHHHHHHHh---CCCcEEEEEeCCCCCcCCCc-ccHHH
Q 002194 812 EATSTYVEMSPFMSANK-LKK-PILLVHGEEDNNSGTLTMQSDRFFNALKG---HGALCRLVILPFESHGYAAR-ESIMH 885 (954)
Q Consensus 812 ~~~~~~~~~sp~~~~~~-~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~~-~~~~~ 885 (954)
+..+.+..++|+.++.+ +++ |+||+||++|.+|| +.++.+++++|+. .|+++++++++++||++... ....+
T Consensus 627 ~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~ 704 (741)
T 1yr2_A 627 ADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVV--PGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIE 704 (741)
T ss_dssp HHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSC--THHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHH
T ss_pred HHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCC--hhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHH
Confidence 22345577899999987 885 99999999999999 9999999999999 88999999999999997543 33457
Q ss_pred HHHHHHHHHHHhcccCC
Q 002194 886 VLWETDRWLQKYCVSNT 902 (954)
Q Consensus 886 ~~~~i~~fl~~~l~~~~ 902 (954)
....+++||.++++...
T Consensus 705 ~~~~~~~fl~~~l~~~~ 721 (741)
T 1yr2_A 705 ETADVQAFLAHFTGLTP 721 (741)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 88899999999996543
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=3.6e-43 Score=428.54 Aligned_cols=572 Identities=12% Similarity=0.060 Sum_probs=388.6
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEEC---CCC--ceeecccCCC----ccccccccceeEe-cCCeEEE
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV---DTG--KARPLFQSPD----IYLNAIFDNFVWV-NNSTLLV 259 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~---~~g--~~~~lt~~~~----~~~~~~~~~~~ws-pDG~~l~ 259 (954)
..+.|. ++|++++|.+..+ +.....+|+.+. +++ ..+.+.+... ..+ ..+..+.|| |||++|+
T Consensus 118 ~~~~p~--~~g~~~yy~~~~~----g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~-~~~~~~~~S~PDG~~lA 190 (751)
T 2xe4_A 118 DMSAPY--VYGKYRYYTREVK----GKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAF-CDVMEVKPAPPEHDLVA 190 (751)
T ss_dssp EECCCE--EETTEEEEEEECT----TCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSC-CEEEEEEECTTTTCEEE
T ss_pred cCCCCe--EECCEEEEEEECC----CCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCe-EEEeeeEecCCCCCEEE
Confidence 445554 7899999987532 333457888886 554 4444433210 000 014578999 9999999
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC-ceeEcCCC--cccc
Q 002194 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVKEIGPP--AVYT 335 (954)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G-~~~~l~~~--~~~~ 335 (954)
|+...... ...+||++|+ +| +. +... ....
T Consensus 191 y~~~~~G~--------------------------------------------~~~~l~v~dl~~g~~~--l~~~~~~~~~ 224 (751)
T 2xe4_A 191 FSVDMSGN--------------------------------------------EVYTIEFKRISDPSQT--IADKVSGTNG 224 (751)
T ss_dssp EEEESSSS--------------------------------------------SCEEEEEEETTCTTCC--CCCCEEEECS
T ss_pred EEEeCCCC--------------------------------------------ceEEEEEEECCCCCEe--CCccccCcee
Confidence 98321100 1246999999 77 52 2222 3356
Q ss_pred ccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002194 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (954)
Q Consensus 336 ~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i 413 (954)
+++|||||+.|+|++.+... ...+|+++++.+++. +.+...+.. .....+.|||||+.|
T Consensus 225 ~~~WspDg~~l~y~~~d~~~--------~~~~v~~~~lgt~~~~~~lv~~~~~~-----------~~~~~~~~SpDg~~l 285 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETL--------RENKVWRHVMGKLQSEDVCLYEEHNP-----------LFSAFMYKAADTNTL 285 (751)
T ss_dssp CCEECSSTTEEEEEEECTTC--------CEEEEEEEETTSCGGGCEEEEECCCT-----------TCEEEEEECTTSSEE
T ss_pred eEEEecCCCEEEEEEECCCC--------CCCEEEEEECCCCchhcEEEEecCCC-----------ceEEEEEECCCCCEE
Confidence 89999999999999854321 123789999886532 233221110 112357899999999
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCC--Cc--eEEeecccccCceeeccC---CceEEEEEecc-ccceEEEE
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE--GP--EILHKLDLRYGGISWCDD---SLALVYESWYK-TRRTRTWV 485 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~--~~--~~l~~~~~~~~~~~~spD---g~~l~~~~~~~-~~~~~l~~ 485 (954)
++.... .....||++++ +++ +. +.++... ..+.|++| |+.|+|.++.+ ..+.+||.
T Consensus 286 ~~~~~~----------~~~~~l~~~d~---~~~~~~~~~~~l~~~~---~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~ 349 (751)
T 2xe4_A 286 CIGSQS----------PETAEVHLLDL---RKGNAHNTLEIVRPRE---KGVRYDVQMHGTSHLVILTNEGGAVNHKLLI 349 (751)
T ss_dssp EEEEEC----------SSCEEEEEEES---SSCTTCCCEEESSCCC---TTCCEEEEEETTTEEEEEECTTTCTTCEEEE
T ss_pred EEEecC----------CCCceEEEEEC---CCCCCCceeEEeecCC---CCceEEEeeeeCCEEEEEeCCCCCCCcEEEE
Confidence 887432 12457999996 433 34 5554332 34557776 99999998876 44579999
Q ss_pred EcCCCCCCCc-E-EEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEEC----
Q 002194 486 ISPGSKDVAP-R-ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI---- 559 (954)
Q Consensus 486 ~d~~~~~~~~-~-~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~---- 559 (954)
++++++ .+. . ++.......+ ..+++++++|++..... ...+|+++|+
T Consensus 350 ~d~~~~-~~~~~~li~~~~~~~l--------~~~~~~~~~lv~~~~~~------------------g~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 350 APRGQP-SDWSHVLVDHSEDVFM--------ESIAVRSNYLVVAGRRA------------------GLTRIWTMMADSQD 402 (751)
T ss_dssp EETTST-TCCCCEEECCCSSEEE--------EEEEECSSEEEEEEEET------------------TEEEEEEEECCTTT
T ss_pred EcCCCc-ccceeeEECCCCCcEE--------EEEEEECCEEEEEEEeC------------------CEEEEEEEeccccc
Confidence 998753 122 2 3332211011 23566677777776321 2456899996
Q ss_pred ---CCCC-eEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCCC-CCCc
Q 002194 560 ---NTGS-KERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP-YPQL 634 (954)
Q Consensus 560 ---~~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~-~~~~ 634 (954)
++++ .+.|.-.... ....+ + ....++++++.+++..++...|..+|.+++.+++.+.|+..+.. ....
T Consensus 403 ~~~~~g~~~~~l~l~~~~----~~~~~-~--~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~~ 475 (751)
T 2xe4_A 403 GVFKAGTGLREVVMEEPI----FTVHL-V--ESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDA 475 (751)
T ss_dssp SCCCTTTCCEECCCCCSS----CEEEE-C--GGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCCG
T ss_pred ccccCCccceEECCCCce----eEEEe-c--cCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCCc
Confidence 6676 6776433321 01111 0 00111568889999999999999999999999988888865432 1223
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcE
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (954)
..+..+.+++++.||.+|++++++|+++++. ++.|+||++|||+..... ..|. ...+.|+++||+
T Consensus 476 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~--~~~P~vl~~HGg~~~~~~---------~~~~----~~~~~l~~~G~~ 540 (751)
T 2xe4_A 476 ANYKVERRFATAPDQTKIPLSVVYHKDLDMS--QPQPCMLYGYGSYGLSMD---------PQFS----IQHLPYCDRGMI 540 (751)
T ss_dssp GGEEEEEEEEECTTCCEEEEEEEEETTSCTT--SCCCEEEECCCCTTCCCC---------CCCC----GGGHHHHTTTCE
T ss_pred cceEEEEEEEECCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCcCCC---------Ccch----HHHHHHHhCCcE
Confidence 3456899999999999999999999876433 358999999998643221 1121 134578899999
Q ss_pred EEEcCCCCCCCCCCcccc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEe
Q 002194 715 ILGGPTTPIIGEGDEEAN----DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (954)
Q Consensus 715 V~~~~~~~~~G~G~~~~~----~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (954)
|+.+++++..++|..+.. ..+....++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+|+|+.
T Consensus 541 v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~ 620 (751)
T 2xe4_A 541 FAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAG 620 (751)
T ss_dssp EEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEE
T ss_pred EEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEe
Confidence 999999888888876432 2334578999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCC----CCCCc----cccchh--hhcHHHHHhcCcccccCCCCCC-EEEEEeCCCCCCCCchHHHHHHHHHHH
Q 002194 791 SGAYNRTLT----PFGFQ----NEDRTL--WEATSTYVEMSPFMSANKLKKP-ILLVHGEEDNNSGTLTMQSDRFFNALK 859 (954)
Q Consensus 791 ~~~~~~~~~----~~~~~----~~~~~~--~~~~~~~~~~sp~~~~~~~~~P-~Lii~G~~D~~v~~~~~~~~~~~~~l~ 859 (954)
+|+.++... ...+. ...+.+ .+..+.+..++|+.++.++++| +||+||++|.+|| +.++.+++++|+
T Consensus 621 ~~~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp--~~~~~~~~~~L~ 698 (751)
T 2xe4_A 621 VPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVA--YWEPAKWVSKLR 698 (751)
T ss_dssp SCCCCHHHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSC--THHHHHHHHHHH
T ss_pred CCcchHHhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCC--HHHHHHHHHHHH
Confidence 998774211 00000 011111 1112345678999999999997 9999999999999 999999999999
Q ss_pred hCC---CcEEEEEeCCCCCcCCCcc-cHHHHHHHHHHHHHHhccc
Q 002194 860 GHG---ALCRLVILPFESHGYAARE-SIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 860 ~~g---~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~~~l~~ 900 (954)
..+ ..+.+.++++++|++.... .....+..+++||.++|+.
T Consensus 699 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 699 ECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp HHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCC
Confidence 884 4567777899999986433 3456667899999999864
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=7.5e-35 Score=345.75 Aligned_cols=321 Identities=12% Similarity=0.062 Sum_probs=248.6
Q ss_pred CCeEEEEECCCCC--eEE-EeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecC
Q 002194 551 IPFLDLFDINTGS--KER-IWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDF 627 (954)
Q Consensus 551 ~~~l~~~d~~~g~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~ 627 (954)
...|+++|+++|+ .+. +.-.... .+ .. .+.+++++.+++..++...|+.+|.+++. ++.+.|+..
T Consensus 371 ~~~l~~~~~~~g~~~~~~~i~lp~~~----~~-~~------~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 371 VAKVVTFTLENEQWTKPVVLKLPYQN----AI-FG------MSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp EEEEEEECEETTEECCCEEECCCSTT----CE-EE------EECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECC
T ss_pred EEEEEEEECCCCceEEEeccCCCCCe----EE-EE------EeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecC
Confidence 3468899987774 344 3322211 11 11 23467888999999999999999999987 888888877
Q ss_pred CCCCCCcCCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHH
Q 002194 628 PHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLL 707 (954)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (954)
+..+. ...+.++.+++++.||.+|++++++|+++++.+ ++|+||++|||+...... .| .....+.
T Consensus 439 ~~~~~-~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~--~~P~vl~~HGG~~~~~~~---------~~---~~~~~q~ 503 (711)
T 4hvt_A 439 LYSFD-SENYVLEQKEATSFDGVKIPYFLVYKKGIKFDG--KNPTLLEAYGGFQVINAP---------YF---SRIKNEV 503 (711)
T ss_dssp SSCCC-GGGEEEEEEEEECTTSCEEEEEEEEETTCCCSS--CCCEEEECCCCTTCCCCC---------CC---CHHHHHH
T ss_pred CcccC-cccCeeEEEEEECCCCeEEEEEEEecCCCCCCC--CccEEEEECCCCCCCCCC---------cc---cHHHHHH
Confidence 54433 234578999999999999999999999865433 599999999986433211 11 1122357
Q ss_pred HHHCCcEEEEcCCCCCCCCCCccc---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcc
Q 002194 708 WLARGFAILGGPTTPIIGEGDEEA---NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (954)
Q Consensus 708 la~~G~~V~~~~~~~~~G~G~~~~---~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~ 784 (954)
|+++||+|+.++++++.++|..+. ...+....++|+.+++++|++++.+|++||+|+|+|+||++++++++++|++|
T Consensus 504 la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f 583 (711)
T 4hvt_A 504 WVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELF 583 (711)
T ss_dssp TGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGC
T ss_pred HHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCce
Confidence 899999999999999888887643 24456678999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCCCCCCCCCCc-----cccchhh--hcHHHHHhcCcccccCCCCC--CEEEEEeCCCCCCCCchHHHHHHH
Q 002194 785 CCGIARSGAYNRTLTPFGFQ-----NEDRTLW--EATSTYVEMSPFMSANKLKK--PILLVHGEEDNNSGTLTMQSDRFF 855 (954)
Q Consensus 785 ~a~v~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~sp~~~~~~~~~--P~Lii~G~~D~~v~~~~~~~~~~~ 855 (954)
+|+|+.+|++|+........ .+.+.++ +..+.+..+||+.+++++++ |+||+||++|.+|| +.++.+++
T Consensus 584 ~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp--~~~s~~~~ 661 (711)
T 4hvt_A 584 GAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVH--PWHGRIFE 661 (711)
T ss_dssp SEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSC--THHHHHHH
T ss_pred EEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCC--hHHHHHHH
Confidence 99999999988643211000 0111111 23455778899999999987 99999999999999 99999999
Q ss_pred HHH-HhCCCcEEEEEeCCCCCcCCCc-ccHHHHHHHHHHHHHHhccc
Q 002194 856 NAL-KGHGALCRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 856 ~~l-~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l~~ 900 (954)
++| +..|++++++++|+++|++... ......+..+++||.++|+.
T Consensus 662 ~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 662 YVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp HHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 999 9999999999999999998543 33456677899999999853
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=2.8e-23 Score=233.74 Aligned_cols=344 Identities=14% Similarity=0.102 Sum_probs=216.6
Q ss_pred CceeeeecCCCC---CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEec
Q 002194 177 GQEIEIQGFPDG---AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN 253 (954)
Q Consensus 177 ~~~~~lt~~~~~---~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp 253 (954)
+..++|+..+.. .....|+|||||++|+|.+. .++..+||++|+++++.++++...... +..+.|||
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~------~~g~~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~sp 90 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGA------FDGPWNYYLLDLNTQVATQLTEGRGDN----TFGGFLSP 90 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEEC------TTSSCEEEEEETTTCEEEECCCSSCBC----SSSCEECT
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEc------CCCCceEEEEeCCCCceEEeeeCCCCC----ccceEEcC
Confidence 456677643311 12334999999999999874 346779999999999999998766532 33678999
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-
Q 002194 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP- 331 (954)
Q Consensus 254 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~- 331 (954)
||+.|+|.. ....||++++ +|+.+.+...
T Consensus 91 dg~~l~~~~-------------------------------------------------~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 91 DDDALFYVK-------------------------------------------------DGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp TSSEEEEEE-------------------------------------------------TTTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEe-------------------------------------------------CCCeEEEEECCCCcceeeeech
Confidence 999999871 1235899999 7776665433
Q ss_pred -ccc--cccccCCCCcEEEEEeecCCcccc---------cccCCCCcceEEEeccCceEEEeccCCCcccCCcccccccc
Q 002194 332 -AVY--TSLDPSPDEKYILISSIHRPYSFI---------VPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRK 399 (954)
Q Consensus 332 -~~~--~~~~~SpDGk~l~~~s~~~~~~~~---------~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~ 399 (954)
... ....++|||+.++........... .........|+++|+++++.+.++... .
T Consensus 122 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-------------~ 188 (388)
T 3pe7_A 122 AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-------------Q 188 (388)
T ss_dssp TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-------------S
T ss_pred hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-------------c
Confidence 222 223459999999875432210000 000112358999999988887776532 1
Q ss_pred Cccceeecc-CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecc--cccCceeeccCCceEEEEEec
Q 002194 400 GMRSINWRS-DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD--LRYGGISWCDDSLALVYESWY 476 (954)
Q Consensus 400 g~~~~~wsp-Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~--~~~~~~~~spDg~~l~~~~~~ 476 (954)
.+..+.||| ||+.|+|..... .+ .....||++++ ++++.+.++... ..+..+.|||||+.|+|.+..
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~--~~-----~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGP--HD-----LVDARMWLINE---DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSC--TT-----TSSCSEEEEET---TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred cccccEECCCCCCEEEEEEecC--CC-----CCcceEEEEeC---CCCceEEeeeCCCCcccccceECCCCCEEEEEecC
Confidence 235688999 999999884311 00 12447999986 677777876654 245678999999999998876
Q ss_pred ccc-ceEEEEEcCCCCCCCcEEEecCCCCC-ccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeE
Q 002194 477 KTR-RTRTWVISPGSKDVAPRILFDRSSED-VYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (954)
Q Consensus 477 ~~~-~~~l~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 554 (954)
.+. ...||++|++++ +.+.++...... ...... ...|||||++|++..... .+. .......|
T Consensus 259 ~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~--~~~~spdg~~l~~~~~~~-----------~~~-~~~~~~~i 322 (388)
T 3pe7_A 259 KGSPDRFIYSADPETL--ENRQLTSMPACSHLMSNYD--GSLMVGDGSDAPVDVQDD-----------SGY-KIENDPFL 322 (388)
T ss_dssp TTCCCEEEEEECTTTC--CEEEEEEECCEEEEEECTT--SSEEEEEECCC------------------------CCCCEE
T ss_pred CCCCcceEEEEecCCC--ceEEEEcCCCceeeeecCC--CCeEccCCCcceeEeeec-----------ccc-ccCCCCEE
Confidence 542 246999999986 444444332200 000000 046999999999875210 000 01124569
Q ss_pred EEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCc
Q 002194 555 DLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (954)
Q Consensus 555 ~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~ 620 (954)
|+||+++++.++|+..... +.............++|||||+++++..... ...+||++++..+.
T Consensus 323 ~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 323 YVFNMKNGTQHRVARHDTS-WKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPESV 386 (388)
T ss_dssp EEEETTTTEEEEEEECCCC-CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGGG
T ss_pred EEEeccCCceEEeccccCc-ccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChhc
Confidence 9999999999999876631 0000000000122468999999999876654 45679999986553
No 15
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=1.9e-23 Score=235.24 Aligned_cols=329 Identities=14% Similarity=0.083 Sum_probs=206.8
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCc
Q 002194 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (954)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~ 190 (954)
...++|||||++|||.+.. ++ . .+||++++.+ ++.++++... +..
T Consensus 38 ~~~~~~SpDg~~l~~~~~~----------------------~g--~------~~l~~~d~~~----g~~~~lt~~~-~~~ 82 (388)
T 3pe7_A 38 FYQKCFTRDGSKLLFGGAF----------------------DG--P------WNYYLLDLNT----QVATQLTEGR-GDN 82 (388)
T ss_dssp TTSCCBCTTSCEEEEEECT----------------------TS--S------CEEEEEETTT----CEEEECCCSS-CBC
T ss_pred hcCccCCCCCCEEEEEEcC----------------------CC--C------ceEEEEeCCC----CceEEeeeCC-CCC
Confidence 3458999999999999873 11 1 2699999854 6677776422 113
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcccccccccee--EecCCeEEEEEecCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFV--WVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~--wspDG~~l~~~~~~~~~~ 268 (954)
...+.|||||++|+|... ...||++|+++++.+.++..+... ..... ++|||+.++.........
T Consensus 83 ~~~~~~spdg~~l~~~~~---------~~~l~~~d~~~g~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKD---------GRNLMRVDLATLEENVVYQVPAEW----VGYGTWVANSDCTKLVGIEIRREDW 149 (388)
T ss_dssp SSSCEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECCTTE----EEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred ccceEEcCCCCEEEEEeC---------CCeEEEEECCCCcceeeeechhhc----ccccceeECCCCCeeccccccCccc
Confidence 447899999999999763 358999999999998887665532 22233 489999888652110000
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-ccccccccCC-CCcE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSP-DEKY 345 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~Sp-DGk~ 345 (954)
.+ . . . ...+... ........|+++|+ +|+.+.++.. ..+..+.||| ||++
T Consensus 150 ~~------~-------~-~----~~~~~~~---------~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~ 202 (388)
T 3pe7_A 150 VP------L-------T-D----WKKFHEF---------YFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDST 202 (388)
T ss_dssp CC------C-------C-S----HHHHHHH---------GGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEE
T ss_pred cc------c-------c-c----cchhhhh---------hccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCE
Confidence 00 0 0 0 0000000 00013367999999 8888888765 6678899999 9999
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~ 425 (954)
|+|.+.... ......|++++.++++.+.++..... ..+..++|||||+.|+|.......
T Consensus 203 l~~~~~~~~-------~~~~~~l~~~d~~~~~~~~l~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~~~--- 261 (388)
T 3pe7_A 203 VAFCHEGPH-------DLVDARMWLINEDGTNMRKVKTHAEG-----------ESCTHEFWVPDGSALVYVSYLKGS--- 261 (388)
T ss_dssp EEEEECSCT-------TTSSCSEEEEETTSCCCEESCCCCTT-----------EEEEEEEECTTSSCEEEEEEETTC---
T ss_pred EEEEEecCC-------CCCcceEEEEeCCCCceEEeeeCCCC-----------cccccceECCCCCEEEEEecCCCC---
Confidence 999985321 11134899999998887777653211 012457899999999887433211
Q ss_pred cccccCCCeEEEEecCCCCCCCceEEeeccc------ccCceeeccCCceEEEEEecc-----ccceEEEEEcCCCCCCC
Q 002194 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYK-----TRRTRTWVISPGSKDVA 494 (954)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~~~~~~-----~~~~~l~~~d~~~~~~~ 494 (954)
....|+++++ ++++.+.++.... ....+.|||||+.|++..... .....||+++++++ +
T Consensus 262 -----~~~~l~~~d~---~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~ 331 (388)
T 3pe7_A 262 -----PDRFIYSADP---ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG--T 331 (388)
T ss_dssp -----CCEEEEEECT---TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT--E
T ss_pred -----CcceEEEEec---CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC--c
Confidence 1225999996 6777777755433 234568999999999875431 22367999999985 4
Q ss_pred cEEEecCCCCCc--cC--CCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCC
Q 002194 495 PRILFDRSSEDV--YS--DPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (954)
Q Consensus 495 ~~~l~~~~~~~~--~~--~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 563 (954)
...++....... .. ......++|||||++|+|.... ...++||++++..+.
T Consensus 332 ~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~------------------~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 332 QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV------------------HGKPALYLATLPESV 386 (388)
T ss_dssp EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT------------------TSSCEEEEEECCGGG
T ss_pred eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC------------------CCceeEEEEECChhc
Confidence 455654432000 00 0001116899999999998721 135679999987653
No 16
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=2.4e-23 Score=254.80 Aligned_cols=349 Identities=15% Similarity=0.085 Sum_probs=221.1
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCccc
Q 002194 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (954)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~ 192 (954)
.++|||||++|+|...+ ... .|-++..++|+|++.+ ++.++|+..+ ..+.
T Consensus 66 ~~~~Spdg~~l~~~~~~----------------------~~~--~r~~~~~~~~~~d~~~----~~~~~l~~~~--~~~~ 115 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNY----------------------VKQ--WRHSYTASYDIYDLNK----RQLITEERIP--NNTQ 115 (740)
T ss_dssp EEEECTTSSEEEEEEEE----------------------EEC--SSSCEEEEEEEEETTT----TEECCSSCCC--TTEE
T ss_pred ceEECCCCCEEEEEECC----------------------eee--EEEccceEEEEEECCC----CcEEEcccCC--Ccce
Confidence 37899999999998873 111 1112335899999965 6666665432 3688
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc--ccc------------cccceeEecCCeEE
Q 002194 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY--LNA------------IFDNFVWVNNSTLL 258 (954)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~--~~~------------~~~~~~wspDG~~l 258 (954)
.|+|||||++|||++ ..+||++++++|+.+++|..+... +++ ....+.|||||+.|
T Consensus 116 ~~~~SPdG~~la~~~----------~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~l 185 (740)
T 4a5s_A 116 WVTWSPVGHKLAYVW----------NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFL 185 (740)
T ss_dssp EEEECSSTTCEEEEE----------TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEE
T ss_pred eeEECCCCCEEEEEE----------CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEE
Confidence 999999999999986 358999999999999998755421 111 11258899999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeec--cCCc-eeeechhhhhccCccccccccccccceEEEEEe-C---C---ceeEc
Q 002194 259 VCTIPLLRGDPPKKPLVPLGPKMQSN--EKRD-IIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---G---TVKEI 328 (954)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~---G---~~~~l 328 (954)
+|...+..... .+.-. .... ..+. ...+.++..+.. ....+|+++|+ + | ..+++
T Consensus 186 a~~~~d~~~v~----------~~~~~~~~~~~~~~~~---~~~~~yp~~G~~---~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 186 AYAQFNDTEVP----------LIEYSFYSDESLQYPK---TVRVPYPKAGAV---NPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp EEEEEECTTCC----------EEEEEECCSTTCSSCE---EEEEECCBTTSC---CCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred EEEEEcccCCc----------eEEEEeecCCCCCCCc---ceeecCCCCcCc---CCeeEEEEEECCCCCCCCcceEEEe
Confidence 99854333221 00000 0000 0000 000111111110 12347999999 7 7 56677
Q ss_pred CC------C-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce----E---EEeccCCCcccCCccc
Q 002194 329 GP------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----V---RELCDLPLAEDIPIAF 394 (954)
Q Consensus 329 ~~------~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~----~---~~l~~~~~~~~~p~~~ 394 (954)
.. . ..+..++|||||+.+++..++... ...|++||+++++ . +.+.........
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~---------~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v---- 316 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQN---------YSVMDICDYDESSGRWNCLVARQHIEMSTTGWV---- 316 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTT---------EEEEEEEEEETTTTEEEECGGGCEEEECSSSCS----
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCC---------EEEEEEEECCCCccccceeEEEEeeeccCCceE----
Confidence 64 2 456789999999988887755322 2279999998765 2 222110000000
Q ss_pred cccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEE
Q 002194 395 NSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYES 474 (954)
Q Consensus 395 ~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~ 474 (954)
+. .....++|||||+.++++.... ++..+||++++ ++++.++|+.+.+.+..+. ++||+.|+|.+
T Consensus 317 ~~--~~~~~p~fspDG~~l~~~~s~~---------~G~~~l~~~~~---~~~~~~~lT~g~~~v~~~~-~~d~~~i~f~~ 381 (740)
T 4a5s_A 317 GR--FRPSEPHFTLDGNSFYKIISNE---------EGYRHICYFQI---DKKDCTFITKGTWEVIGIE-ALTSDYLYYIS 381 (740)
T ss_dssp SS--SSCCCCEECTTSSEEEEEEECT---------TSCEEEEEEET---TCSSCEESCCSSSCEEEEE-EECSSEEEEEE
T ss_pred cc--CcCCCceEcCCCCEEEEEEEcC---------CCceEEEEEEC---CCCceEecccCCEEEEEEE-EEeCCEEEEEE
Confidence 00 0124688999999988663322 33568999996 7888899998888776654 46799999998
Q ss_pred ec--c-ccceEEEEEcCCCCCCCcE-EEecC---CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCC
Q 002194 475 WY--K-TRRTRTWVISPGSKDVAPR-ILFDR---SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATP 547 (954)
Q Consensus 475 ~~--~-~~~~~l~~~d~~~~~~~~~-~l~~~---~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~ 547 (954)
+. + ..+.+||.++++++ ..+ .++.. .....+. ++|||||+++++.....
T Consensus 382 ~~~~~~~~~~~ly~v~~~g~--~~~~~lt~~~~~~~~~~~~------~~~S~dg~~~~~~~s~~---------------- 437 (740)
T 4a5s_A 382 NEYKGMPGGRNLYKIQLIDY--TKVTCLSCELNPERCQYYS------VSFSKEAKYYQLRCSGP---------------- 437 (740)
T ss_dssp SCGGGCTTCBEEEEEETTEE--EEEEESSTTTSTTTBCBEE------EEECTTSSEEEEEECSB----------------
T ss_pred ecCCCCCceeEEEEEECCCC--CcceeeccccCCCCCceEE------EEECCCCCEEEEEeCCC----------------
Confidence 76 3 24578999999875 222 44422 1111222 78999999998887321
Q ss_pred CCCCCeEEEEECCCCCeEEEeccC
Q 002194 548 EGNIPFLDLFDINTGSKERIWESD 571 (954)
Q Consensus 548 ~~~~~~l~~~d~~~g~~~~l~~~~ 571 (954)
..+.+++++.++++..+++...
T Consensus 438 --~~p~~~l~~~~~~~~~~~l~~n 459 (740)
T 4a5s_A 438 --GLPLYTLHSSVNDKGLRVLEDN 459 (740)
T ss_dssp --SSCEEEEEETTTTEEEEEEECC
T ss_pred --CCCEEEEEECCCCcEEEEeccC
Confidence 1456899999988877776544
No 17
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=2.7e-22 Score=245.59 Aligned_cols=337 Identities=12% Similarity=0.062 Sum_probs=204.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|||...+ .... +.++...|++|++.+ ++.++++......
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~----------------------~~~~--~~~~~~~i~~~d~~~----~~~~~l~~~~~~~ 113 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNV----------------------EPIY--QHSYTGYYVLSKIPH----GDPQSLDPPEVSN 113 (723)
T ss_dssp TCSEEEECTTSSEEEEEESC----------------------CCCS--SSCCCSEEEEEESSS----CCCEECCCTTCCS
T ss_pred ccceEEECCCCCEEEEEecC----------------------ccce--eecceeeEEEEECCC----CceEeccCCcccc
Confidence 36789999999999999764 1111 011124799999954 4445565332211
Q ss_pred -cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc--c------------ccccceeEecC
Q 002194 190 -KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL--N------------AIFDNFVWVNN 254 (954)
Q Consensus 190 -~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~--~------------~~~~~~~wspD 254 (954)
.+..++|||||++|||.+ ..+||++++++++.++++..+.... + ..+..+.||||
T Consensus 114 ~~~~~~~~SPdG~~la~~~----------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD 183 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIF----------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD 183 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEE----------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT
T ss_pred ccccccEECCCCCEEEEEE----------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCC
Confidence 478899999999999986 2489999999999988886543211 0 01246999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-
Q 002194 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP- 331 (954)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~- 331 (954)
|+.|++.................+. .... ...+.++.++.. .....|+++|+ +++ .+.+..+
T Consensus 184 g~~la~~~~~~~~~~~~~~~~~~~~-----~~~~-------~~~~~~~~~G~~---~~~~~l~~~d~~~~~~~~~l~~~~ 248 (723)
T 1xfd_A 184 GTRLAYAAINDSRVPIMELPTYTGS-----IYPT-------VKPYHYPKAGSE---NPSISLHVIGLNGPTHDLEMMPPD 248 (723)
T ss_dssp SSEEEEEEEECTTSCEEEECCCSSS-----SSCC-------CEEEECCBTTSC---CCEEEEEEEESSSSCCCEECCCCC
T ss_pred CCEEEEEEECCCccceEEeeccCCc-----CCCc-------ceeccCCCCCCC---CCeeEEEEEECCCCceeEEeeCCc
Confidence 9999998543321100000000000 0000 000111111111 12357999999 776 3666542
Q ss_pred ------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCcccee
Q 002194 332 ------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (954)
Q Consensus 332 ------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~ 405 (954)
..+..++|||||++|++...+... ...|++||+++++...+.......... .....++
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---------~~~i~~~d~~~g~~~~~~~~~~~~~~~-------~~~~~~~ 312 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQN---------VSILTLCDATTGVCTKKHEDESEAWLH-------RQNEEPV 312 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSC---------EEEEEEEETTTCCEEEEEEEECSSCCC-------CCCCCCE
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCCC---------eEEEEEEeCCCCcceEEEEeccCCEEe-------ccCCCce
Confidence 345679999999998877654321 237999999987766554311100000 0013688
Q ss_pred eccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC---ceEEeecccccCc-eeeccCCceEEEEEeccc-cc
Q 002194 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEILHKLDLRYGG-ISWCDDSLALVYESWYKT-RR 480 (954)
Q Consensus 406 wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~~~l~~~~~~~~~-~~~spDg~~l~~~~~~~~-~~ 480 (954)
|||||+.|++.....++.. ....+||+++. .++++ .+.++.+.+.+.. ++|||||+.|+|.+..+. ..
T Consensus 313 ~spdg~~l~~~~~~~~~~~-----~~~~~l~~~d~--~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 385 (723)
T 1xfd_A 313 FSKDGRKFFFIRAIPQGGR-----GKFYHITVSSS--QPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRR 385 (723)
T ss_dssp ECTTSCSEEEEEEECCSSS-----SCEEEEEEECS--SCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTC
T ss_pred EcCCCCeEEEEEecccCCC-----cceeEEEEEec--cCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcc
Confidence 9999999988733322210 11347888882 25666 6777765555544 699999999999887641 34
Q ss_pred eEEEEEcCCCCCCCcEEEecC--CCCCccCCCCCCCeeeccCCcEEEEEEe
Q 002194 481 TRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (954)
Q Consensus 481 ~~l~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~spdG~~l~~~~~ 529 (954)
.+||.++.+++ .....++.. +...+.. ++|||||+++++...
T Consensus 386 ~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~------~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 386 RQLYSANTVGN-FNRQCLSCDLVENCTYFS------ASFSHSMDFFLLKCE 429 (723)
T ss_dssp CEEEEECSSTT-CCCBCSSTTSSSSCCCCE------EEECTTSSEEEEECC
T ss_pred eEEEEEeCCCC-CCcceecccccCCCCeEE------EEECCCCCEEEEEcc
Confidence 78999998764 123333321 1111222 789999999998874
No 18
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=7.3e-22 Score=251.16 Aligned_cols=392 Identities=13% Similarity=0.032 Sum_probs=238.1
Q ss_pred CCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCC
Q 002194 108 APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD 187 (954)
Q Consensus 108 ~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~ 187 (954)
......++||| ++|||++.+ +||+|++.+ ++.++|+.++
T Consensus 14 ~~~~~~~~~S~--~~iaf~~~~----------------------------------~l~~~~~~g----g~~~~lt~~~- 52 (1045)
T 1k32_A 14 PNLLLNPDIHG--DRIIFVCCD----------------------------------DLWEHDLKS----GSTRKIVSNL- 52 (1045)
T ss_dssp CCCCEEEEEET--TEEEEEETT----------------------------------EEEEEETTT----CCEEEEECSS-
T ss_pred cceEeCcEEeC--CEEEEEECC----------------------------------cEEEEECCC----CcEEEeeeCC-
Confidence 34567899995 699999874 899999854 6778887633
Q ss_pred CCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc--ccccccceeEecCCeEEEEEecCC
Q 002194 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY--LNAIFDNFVWVNNSTLLVCTIPLL 265 (954)
Q Consensus 188 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~--~~~~~~~~~wspDG~~l~~~~~~~ 265 (954)
..+..++|||||++|||++... ..++..+||++++++|+.++++...... ....+..++|||||+ |+++....
T Consensus 53 -~~v~~~~~SPDG~~la~~s~~~---~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~ 127 (1045)
T 1k32_A 53 -GVINNARFFPDGRKIAIRVMRG---SSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAM 127 (1045)
T ss_dssp -SEEEEEEECTTSSEEEEEEEES---TTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTT
T ss_pred -CcccCeEECCCCCEEEEEEeec---cCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCE-EEEEECCc
Confidence 4789999999999999987531 1135679999999999999998765430 000016899999999 55553221
Q ss_pred CCCCCCCCCCCCCCcee--eccCCceee--echhhh------hccC---ccccccc---cccccceEEEEEeCCceeEcC
Q 002194 266 RGDPPKKPLVPLGPKMQ--SNEKRDIIQ--VRTFQD------LLKD---EYDEDLF---DYYATTQLVLVSLDGTVKEIG 329 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~--~~~~~~~~~--~r~~~d------~l~~---~~d~~~~---~~~~~~~l~~~~~~G~~~~l~ 329 (954)
.... ....+. ...++.... .....+ .+.. ..+.... .-.....||..+.+|+.+.+.
T Consensus 128 ~~~~-------~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~ 200 (1045)
T 1k32_A 128 QPFS-------SMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV 200 (1045)
T ss_dssp SSST-------TCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE
T ss_pred CCCc-------ccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECc
Confidence 1000 000000 000000000 000000 0000 0000000 001235677655566667775
Q ss_pred CC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCccc---CC----c---------
Q 002194 330 PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAED---IP----I--------- 392 (954)
Q Consensus 330 ~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~---~p----~--------- 392 (954)
.. ..+..+.||+| .++|.+.... ...||.++.+++..+.++.+..... .| +
T Consensus 201 ~~~~~v~~~~~s~d--~l~~~~~~dg----------~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~ 268 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH--RIYFITDIDG----------FGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIY 268 (1045)
T ss_dssp CCSSCCEEEEEETT--EEEEEECTTS----------SCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEE
T ss_pred CCCCcccceEEeCC--EEEEEEeccC----------ceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEE
Confidence 55 77788899988 6777764321 1245555555555454443221000 00 0
Q ss_pred ----------cccc-----------cccCccceeec-cCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE
Q 002194 393 ----------AFNS-----------VRKGMRSINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (954)
Q Consensus 393 ----------~~~~-----------~~~g~~~~~ws-pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (954)
.+.. ....+..++|| |||+.+++.. .+.++++++ .+++.+.
T Consensus 269 ~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--------------~~~i~~~~~---~~~~~~~ 331 (1045)
T 1k32_A 269 IFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--------------RGQAFIQDV---SGTYVLK 331 (1045)
T ss_dssp EECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--------------TTEEEEECT---TSSBEEE
T ss_pred EecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE--------------cCEEEEEcC---CCCceEE
Confidence 0000 01135567888 8888777761 447888885 5566666
Q ss_pred Eeeccc-ccCceeeccCCceEEEEEeccccceEEE-EEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 451 LHKLDL-RYGGISWCDDSLALVYESWYKTRRTRTW-VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 451 l~~~~~-~~~~~~~spDg~~l~~~~~~~~~~~~l~-~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
++.... .+..++|+ ||+.|++.+. ..+|| +++++++ +...++ .....+.. ++|||||++|++..
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~-~~~~~~~~------~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFE-ENLGNVFA------MGVDRNGKFAVVAN 397 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECC-CCCCSEEE------EEECTTSSEEEEEE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEec-CCccceee------eEECCCCCEEEEEC
Confidence 665555 67789999 9999999875 25799 8998875 344444 22222222 78999999999876
Q ss_pred eeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecC---
Q 002194 529 KKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESK--- 605 (954)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~--- 605 (954)
. ...|++||+++++.+.+...... ....++|||||+++++.....
T Consensus 398 ~---------------------~~~v~~~d~~tg~~~~~~~~~~~-----------~v~~~~~SpDG~~la~~~~~~~~~ 445 (1045)
T 1k32_A 398 D---------------------RFEIMTVDLETGKPTVIERSREA-----------MITDFTISDNSRFIAYGFPLKHGE 445 (1045)
T ss_dssp T---------------------TSEEEEEETTTCCEEEEEECSSS-----------CCCCEEECTTSCEEEEEEEECSST
T ss_pred C---------------------CCeEEEEECCCCceEEeccCCCC-----------CccceEECCCCCeEEEEecCcccc
Confidence 2 23599999999998888743321 011357999999998877654
Q ss_pred ---CCCceEEEEECCCCceeEeecC
Q 002194 606 ---TENTQYYIQSWPDKKSCQITDF 627 (954)
Q Consensus 606 ---~~p~~l~~~~~~~g~~~~Lt~~ 627 (954)
..+..++++++.+++.+.++..
T Consensus 446 ~~~~~~~~i~l~d~~~g~~~~l~~~ 470 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRKIFAATTE 470 (1045)
T ss_dssp TCSCCEEEEEEEETTTTEEEECSCS
T ss_pred ccCCCCCeEEEEECCCCcEEEeeCC
Confidence 4457899999988877666643
No 19
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.89 E-value=4.4e-22 Score=207.70 Aligned_cols=221 Identities=19% Similarity=0.205 Sum_probs=165.9
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
+..+.++++. +|..+.++++.|++. +++.|+||++||... ........+..|+++||.|+
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~p~~~----~~~~p~vv~~HG~~g---------------~~~~~~~~~~~l~~~G~~v~ 63 (241)
T 3f67_A 4 IIAGETSIPS-QGENMPAYHARPKNA----DGPLPIVIVVQEIFG---------------VHEHIRDLCRRLAQEGYLAI 63 (241)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEETTC----CSCEEEEEEECCTTC---------------SCHHHHHHHHHHHHTTCEEE
T ss_pred ceeeeEEEec-CCcceEEEEecCCCC----CCCCCEEEEEcCcCc---------------cCHHHHHHHHHHHHCCcEEE
Confidence 5577888887 899999999999752 235899999999421 11112345677889999999
Q ss_pred EcCCCCCCCCCCccc----------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccE
Q 002194 717 GGPTTPIIGEGDEEA----------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~----------~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a 786 (954)
++++++..|...... .........+|+.+++++|.+++ +|+++|+++|||+||.+++.++.++|+ +++
T Consensus 64 ~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~ 141 (241)
T 3f67_A 64 APELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKA 141 (241)
T ss_dssp EECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCE
T ss_pred EecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cce
Confidence 966643322111111 01123467899999999999987 888999999999999999999999977 778
Q ss_pred EEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEE
Q 002194 787 GIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCR 866 (954)
Q Consensus 787 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 866 (954)
+|+..+....... .+...+|...+.++++|+|++||++|..+| ++++.++++.++..+.+++
T Consensus 142 ~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~ 203 (241)
T 3f67_A 142 AVAWYGKLVGEKS----------------LNSPKHPVDIAVDLNAPVLGLYGAKDASIP--QDTVETMRQALRAANATAE 203 (241)
T ss_dssp EEEESCCCSCCCC----------------SSSCCCHHHHGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHHHTTCSEE
T ss_pred EEEEeccccCCCc----------------cCCccCHHHhhhhcCCCEEEEEecCCCCCC--HHHHHHHHHHHHHcCCCcE
Confidence 8877765321110 012245566677889999999999999998 9999999999999999999
Q ss_pred EEEeCCCCCcCCC-------cccHHHHHHHHHHHHHHh
Q 002194 867 LVILPFESHGYAA-------RESIMHVLWETDRWLQKY 897 (954)
Q Consensus 867 ~~~~~~~~H~~~~-------~~~~~~~~~~i~~fl~~~ 897 (954)
++++|+++|.+.. .+.....++.+++||++|
T Consensus 204 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 204 IVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp EEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 9999999999852 233467788899998754
No 20
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.89 E-value=4e-22 Score=212.94 Aligned_cols=237 Identities=14% Similarity=0.124 Sum_probs=170.8
Q ss_pred EEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCC
Q 002194 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (954)
Q Consensus 642 ~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~ 721 (954)
.++.+.+|..+.+++..|....+ .++.|+||++|||++..+. .......+..|+++||.|+.+++
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~--~~~~p~vv~~HGgg~~~~~------------~~~~~~~~~~l~~~G~~v~~~d~- 81 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNE--NYTFPAIIICPGGGYQHIS------------QRESDPLALAFLAQGYQVLLLNY- 81 (276)
T ss_dssp EECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTSCC------------GGGSHHHHHHHHHTTCEEEEEEC-
T ss_pred ccccCCCCeEEEEEEeCCccccc--CCCCCEEEEEcCCccccCC------------chhhHHHHHHHHHCCCEEEEecC-
Confidence 34566788888876655542111 1458999999997533221 11123456788899999999555
Q ss_pred CCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh-CCCcccEEEEeccCCCCC
Q 002194 722 PIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRT 797 (954)
Q Consensus 722 ~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~ 797 (954)
+|+|.+... ......+.|+.++++++.++. .+|+++|+|+|||+||.+++.++.+ .+.+++++|+.+|+.+..
T Consensus 82 --~g~g~s~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~ 158 (276)
T 3hxk_A 82 --TVMNKGTNY-NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFT 158 (276)
T ss_dssp --CCTTSCCCS-CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTT
T ss_pred --ccCCCcCCC-CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHH
Confidence 455553322 234577899999999998874 3788999999999999999999998 678999999999987633
Q ss_pred CCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 002194 798 LTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (954)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 877 (954)
.. +.......... ..+. ...++...+.++.+|+|++||++|..|| +.++.+++++++..+.+++++++++++|.+
T Consensus 159 ~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 233 (276)
T 3hxk_A 159 FG-WPSDLSHFNFE-IENI-SEYNISEKVTSSTPPTFIWHTADDEGVP--IYNSLKYCDRLSKHQVPFEAHFFESGPHGV 233 (276)
T ss_dssp SS-CSSSSSSSCCC-CSCC-GGGBTTTTCCTTSCCEEEEEETTCSSSC--THHHHHHHHHHHTTTCCEEEEEESCCCTTC
T ss_pred hh-CCcchhhhhcC-chhh-hhCChhhccccCCCCEEEEecCCCceeC--hHHHHHHHHHHHHcCCCeEEEEECCCCCCc
Confidence 22 11110000000 1111 4567777888899999999999999999 999999999999999999999999999987
Q ss_pred CCcc------------cHHHHHHHHHHHHHHhcccC
Q 002194 878 AARE------------SIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 878 ~~~~------------~~~~~~~~i~~fl~~~l~~~ 901 (954)
.... ....+++.+.+||+++.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 234 SLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNL 269 (276)
T ss_dssp TTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTT
T ss_pred cccCccccccccccCchHHHHHHHHHHHHHhCcccc
Confidence 5322 34678888999999987544
No 21
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.89 E-value=8.8e-22 Score=221.29 Aligned_cols=231 Identities=19% Similarity=0.150 Sum_probs=173.8
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
...+.++++. +|.+|++++++|++. ++.|+||++||+.... .. .......|+++||.|+
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~-----~~~P~vl~~hG~~~~~-----------~~----~~~~~~~l~~~G~~v~ 183 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP-----GPHPAVIMLGGLESTK-----------EE----SFQMENLVLDRGMATA 183 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS-----CCEEEEEEECCSSCCT-----------TT----THHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC-----CCCCEEEEeCCCCccH-----------HH----HHHHHHHHHhCCCEEE
Confidence 5688899987 899999999999862 3589999999863110 01 1234677889999999
Q ss_pred EcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC
Q 002194 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (954)
.++ .+|+|.+............++.+++++|.+++.+|+++|+|+|+|+||++++.++.+ |++|+++|++ |+++.
T Consensus 184 ~~d---~rG~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~ 258 (386)
T 2jbw_A 184 TFD---GPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSD 258 (386)
T ss_dssp EEC---CTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSC
T ss_pred EEC---CCCCCCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCCh
Confidence 944 456666522211122334568889999999988899999999999999999999999 7899999999 88775
Q ss_pred CCCCCCCcc----------ccchhhhcH-HHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHH-HhCCCc
Q 002194 797 TLTPFGFQN----------EDRTLWEAT-STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNAL-KGHGAL 864 (954)
Q Consensus 797 ~~~~~~~~~----------~~~~~~~~~-~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l-~~~g~~ 864 (954)
......+.. .....++.. ..+..+++...+.++++|+|++||++|. |+ +.+++++++++ +. +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~--~~~~~~l~~~l~~~---~ 332 (386)
T 2jbw_A 259 LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPAE---H 332 (386)
T ss_dssp STTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCGG---G
T ss_pred HHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CC--HHHHHHHHHHhcCC---C
Confidence 322111100 000112222 4556778888889999999999999999 98 89999999988 54 5
Q ss_pred EEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcccC
Q 002194 865 CRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 865 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
++++++++++|.+ ..+...+.+.+.+||+++++..
T Consensus 333 ~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 333 LNLVVEKDGDHCC--HNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEEEEETTCCGGG--GGGTTHHHHHHHHHHHHHHTSS
T ss_pred cEEEEeCCCCcCC--ccchHHHHHHHHHHHHHhcCCc
Confidence 8999999999976 4556788899999999999754
No 22
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=4.9e-21 Score=235.05 Aligned_cols=331 Identities=13% Similarity=0.152 Sum_probs=212.3
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc------------------cc--ccccce
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY------------------LN--AIFDNF 249 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~------------------~~--~~~~~~ 249 (954)
.+..++|||||++|+|.+..+ .++....||++|+++|+.++++...... +. ..+..+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d---~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKD---SDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCS---SCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEeccC---CCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 578899999999999987411 1223569999999999988877543210 00 125689
Q ss_pred eEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC---ce
Q 002194 250 VWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TV 325 (954)
Q Consensus 250 ~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G---~~ 325 (954)
+|||||+.|+++ ...+|+++++ +| ..
T Consensus 115 ~~SpDg~~l~~~--------------------------------------------------~~~~i~~~d~~~~~~~~~ 144 (741)
T 2ecf_A 115 QWSPDAQRLLFP--------------------------------------------------LGGELYLYDLKQEGKAAV 144 (741)
T ss_dssp EECTTSSEEEEE--------------------------------------------------ETTEEEEEESSSCSTTSC
T ss_pred EECCCCCEEEEE--------------------------------------------------eCCcEEEEECCCCCcceE
Confidence 999999999987 1246999999 77 77
Q ss_pred eEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcc---cCCcccc-ccccC
Q 002194 326 KEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE---DIPIAFN-SVRKG 400 (954)
Q Consensus 326 ~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~---~~p~~~~-~~~~g 400 (954)
++++.. ..+..++|||||++|+|.+. .+|++||+++++.++++...... ..+.+.. .....
T Consensus 145 ~~l~~~~~~~~~~~~SPDG~~la~~~~--------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 210 (741)
T 2ecf_A 145 RQLTHGEGFATDAKLSPKGGFVSFIRG--------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDR 210 (741)
T ss_dssp CBCCCSSSCEEEEEECTTSSEEEEEET--------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCC
T ss_pred EEcccCCcccccccCCCCCCEEEEEeC--------------CcEEEEecCCCCEEEeccCCccceeccccceeeeecccc
Confidence 777766 67788999999999999983 28999999988887776533210 0000000 00112
Q ss_pred ccceeeccCCCCceEEEEeccCCCc----------------cc----cccCCCeEEEEecCCCCC-CCceEEee---ccc
Q 002194 401 MRSINWRSDKPSTLYWAETQDGGDA----------------KV----EVTPRDIIYTQQAEPVQG-EGPEILHK---LDL 456 (954)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~----------------~~----~~~~~~~l~~~~~~~~~g-~~~~~l~~---~~~ 456 (954)
...++|||||+.|+|.......... .+ .......|+++++ ++ ++.+.+.. ...
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~~ 287 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---AEQAQTQWIDLGKEQDI 287 (741)
T ss_dssp CCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---STTCCCEEECCCSCSSE
T ss_pred ccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---CCCCceEEecCCCCcce
Confidence 4679999999999987321100000 00 0011237889986 56 66666642 344
Q ss_pred ccCceeeccCCceEEEEEe-ccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCC
Q 002194 457 RYGGISWCDDSLALVYESW-YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEG 535 (954)
Q Consensus 457 ~~~~~~~spDg~~l~~~~~-~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~ 535 (954)
.+..++| |||+.|++... .......|+++|+.++ +.+.+.......... ....++|||||+ +++....
T Consensus 288 ~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~--~~~~~~~spdg~-~~~~~~~----- 356 (741)
T 2ecf_A 288 YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWVP--LHNSLRFLDDGS-ILWSSER----- 356 (741)
T ss_dssp EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCCC--CCSCCEECTTSC-EEEEECT-----
T ss_pred EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcCC--cCCceEECCCCe-EEEEecC-----
Confidence 5678999 99999999875 3334578999999986 344443322211000 001178999999 4454411
Q ss_pred cEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCC-CceEEEE
Q 002194 536 TYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTE-NTQYYIQ 614 (954)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~-p~~l~~~ 614 (954)
....+||.+|++++ .+.++..... +..+ ..|||||+.+++....... ...||.+
T Consensus 357 -------------~g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~------~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 357 -------------TGFQHLYRIDSKGK-AAALTHGNWS-----VDEL------LAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp -------------TSSCEEEEECSSSC-EEESCCSSSC-----EEEE------EEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred -------------CCccEEEEEcCCCC-eeeeeecceE-----EEeE------eEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 12356999998777 7777765432 1211 2489999998877664321 3457777
Q ss_pred ECCCCceeEeec
Q 002194 615 SWPDKKSCQITD 626 (954)
Q Consensus 615 ~~~~g~~~~Lt~ 626 (954)
+..++..++|+.
T Consensus 412 ~~~g~~~~~l~~ 423 (741)
T 2ecf_A 412 PLQGGQPQRLSK 423 (741)
T ss_dssp ETTCCCCEECCC
T ss_pred EcCCCCeeeccc
Confidence 765665677764
No 23
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.88 E-value=7.5e-22 Score=208.32 Aligned_cols=230 Identities=13% Similarity=0.084 Sum_probs=148.8
Q ss_pred CCCceeEeecCCCCCCCcCCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCC
Q 002194 617 PDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNE 696 (954)
Q Consensus 617 ~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~ 696 (954)
..|+.+..+..+......-..+.+.+++ ..||.+|+++||+|++ ..+.|+||++||++.. .
T Consensus 9 ~~~~~r~~~~~~~~~~~~~~~~e~~~~~-~~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~-------------~ 69 (259)
T 4ao6_A 9 HHGSMRHQMSWNGKDERKLSVQERGFSL-EVDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTH-------------K 69 (259)
T ss_dssp --------CEECSCCEEETTEEEEEEEE-EETTEEEEEEEEEESS-----SCCSEEEEEEC-------------------
T ss_pred ccCcceeeeccCCCccccCCceEEEEEE-eeCCeEEEEEEEeCCC-----CCCCCEEEEeCCCccc-------------c
Confidence 3455555554443222111222334444 4799999999999975 3358999999997421 1
Q ss_pred CCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---------------------hhhHHHHHHHHHHHHHHHHHcCC
Q 002194 697 FPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---------------------DRFVEQLVACAEAAVEEVVRRGV 755 (954)
Q Consensus 697 ~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---------------------~~~~~~~~~D~~~av~~l~~~~~ 755 (954)
........++.|+++||+|+.++++ |+|.+... .......+.|..++++++...
T Consensus 70 ~~~~~~~~a~~la~~Gy~Vl~~D~r---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~-- 144 (259)
T 4ao6_A 70 KVEYIEQVAKLLVGRGISAMAIDGP---GHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE-- 144 (259)
T ss_dssp --CHHHHHHHHHHHTTEEEEEECCC---C-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--
T ss_pred cchHHHHHHHHHHHCCCeEEeeccC---CCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--
Confidence 1111234678899999999995554 54443110 111234467888889988665
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEE
Q 002194 756 AHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILL 835 (954)
Q Consensus 756 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Li 835 (954)
+|+++|+++|+|+||++++.+++..|+ ++|+|+..+..... ...++...+.++++|+||
T Consensus 145 ~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~--------------------~~~~~~~~a~~i~~P~Li 203 (259)
T 4ao6_A 145 EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGV--------------------NGEDLVRLAPQVTCPVRY 203 (259)
T ss_dssp HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTST--------------------THHHHHHHGGGCCSCEEE
T ss_pred cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccccc--------------------cccchhhhhccCCCCEEE
Confidence 688999999999999999999999964 77766654432100 012344567789999999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 836 i~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+||++|.+|| ++++.++++++.. .+++++++|+ +|... ...+..+.+++||++||+
T Consensus 204 ~hG~~D~~vp--~~~~~~l~~al~~--~~k~l~~~~G-~H~~~---p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 204 LLQWDDELVS--LQSGLELFGKLGT--KQKTLHVNPG-KHSAV---PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEESS-CTTCC---CHHHHTHHHHHHHHHHCC
T ss_pred EecCCCCCCC--HHHHHHHHHHhCC--CCeEEEEeCC-CCCCc---CHHHHHHHHHHHHHHhcC
Confidence 9999999999 9999999999853 4578899998 55432 234667889999999985
No 24
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=239.63 Aligned_cols=349 Identities=14% Similarity=0.049 Sum_probs=212.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce---eeeecCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE---IEIQGFP 186 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~---~~lt~~~ 186 (954)
.+..++|||||++|||.+.. + .. .+-+....|++|++.+ ++. ++++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~--------------------~--~~--~~~s~~~~i~~~d~~~----g~~~~~~~l~--- 109 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDY--------------------S--KL--WRYSYTATYYIYDLSN----GEFVRGNELP--- 109 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEE--------------------E--EC--SSSCEEEEEEEEETTT----TEECCSSCCC---
T ss_pred ceeeEEECCCCCeEEEEecC--------------------c--ee--EEeecceEEEEEECCC----CccccceecC---
Confidence 36789999999999998762 0 00 0112235899999854 444 3332
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc-c-c------------ccccceeEe
Q 002194 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY-L-N------------AIFDNFVWV 252 (954)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~-~-~------------~~~~~~~ws 252 (954)
..+..++|||||++|||+. ..+||++++++|+.++++..+... + + .....+.||
T Consensus 110 --~~~~~~~~SPDG~~la~~~----------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 110 --RPIQYLCWSPVGSKLAYVY----------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp --SSBCCEEECSSTTCEEEEE----------TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred --cccccceECCCCCEEEEEE----------CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 2478899999999999975 348999999999988887544321 0 0 011479999
Q ss_pred cCCeEEEEEecCCCCCCCC-C--CCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce---
Q 002194 253 NNSTLLVCTIPLLRGDPPK-K--PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--- 325 (954)
Q Consensus 253 pDG~~l~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~--- 325 (954)
|||+.|++...+......- . ...+.-+. .. .+.++..+.. .....|+++|+ +|+.
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~--------~~-------~~~yp~~g~~---~~~~~l~~~d~~~~~~~~~ 239 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPR--------TI-------NIPYPKAGAK---NPVVRIFIIDTTYPAYVGP 239 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCE--------EE-------EEECCBTTSC---CCEEEEEEEESSCHHHHCC
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCcc--------ce-------eecCCCCCCC---CCeeEEEEEECCCCCccce
Confidence 9999999985432221000 0 00000000 00 0011111100 13457999999 6654
Q ss_pred eEcCC------C-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEe----ccCceEEEecc---CCCcccCC
Q 002194 326 KEIGP------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWT----TDGIFVRELCD---LPLAEDIP 391 (954)
Q Consensus 326 ~~l~~------~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d----~~g~~~~~l~~---~~~~~~~p 391 (954)
.++.. . ..+..++|||||+.++...++... ...|++|| +++++.+.+.. ........
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~---------~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~ 310 (719)
T 1z68_A 240 QEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN---------VSVLSICDFREDWQTWDCPKTQEHIEESRTGWAG 310 (719)
T ss_dssp EECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT---------EEEEEEEEECSSSSSEECCGGGEEEEECSSSCSS
T ss_pred eEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC---------eEEEEEEcccCCCCCCceEEEEecccccCCceEc
Confidence 24432 2 456789999997654443322211 12699999 77776655542 00000000
Q ss_pred ccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEE
Q 002194 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALV 471 (954)
Q Consensus 392 ~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~ 471 (954)
. .....+.|||||+.++++.... ++..+||++++ ++++.+.++...+.+..+.++ ||+.|+
T Consensus 311 ~------~~~~~~~~spdg~~l~~~~~~~---------~g~~~l~~~~~---~~~~~~~lt~~~~~v~~~~~~-d~~~i~ 371 (719)
T 1z68_A 311 G------FFVSTPVFSYDAISYYKIFSDK---------DGYKHIHYIKD---TVENAIQITSGKWEAINIFRV-TQDSLF 371 (719)
T ss_dssp S------SSCCCCEECTTSSCEEEEEECT---------TSCEEEEEESS---CSTTCEECSCSSSCEEEEEEE-CSSEEE
T ss_pred c------ccCCccEECCCCCeEEEEEEcc---------CCceEEEEEEC---CCCceEecccCceEEEEEEEE-eCCEEE
Confidence 0 0012678999999988863332 23558999986 667788888777777777778 999999
Q ss_pred EEEec--c-ccceEEEEEcCCCCCCCcEEEecC---CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCC
Q 002194 472 YESWY--K-TRRTRTWVISPGSKDVAPRILFDR---SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (954)
Q Consensus 472 ~~~~~--~-~~~~~l~~~d~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (954)
|.+.. + ....+||.++.+++..++..++.. ....+.. ++|||||+++++.....
T Consensus 372 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~------~~~s~dg~~l~~~~s~~-------------- 431 (719)
T 1z68_A 372 YSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYT------ASFSDYAKYYALVCYGP-------------- 431 (719)
T ss_dssp EEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEE------EEECGGGSSEEEEECCB--------------
T ss_pred EEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEE------EEECCCCCEEEEEcCCC--------------
Confidence 99875 1 234789999987642233444421 1111112 78999999998876221
Q ss_pred CCCCCCCeEEEEECCCCCeEEEeccC
Q 002194 546 TPEGNIPFLDLFDINTGSKERIWESD 571 (954)
Q Consensus 546 ~~~~~~~~l~~~d~~~g~~~~l~~~~ 571 (954)
..+.+++||+++++..+++...
T Consensus 432 ----~~p~~~l~d~~~g~~~~~~~~~ 453 (719)
T 1z68_A 432 ----GIPISTLHDGRTDQEIKILEEN 453 (719)
T ss_dssp ----SSCEEEEECSSSCCEEEEEECC
T ss_pred ----CCCeEEEEECCCCCEEEEeecc
Confidence 2346889999999877776654
No 25
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=3.5e-21 Score=218.45 Aligned_cols=256 Identities=15% Similarity=0.139 Sum_probs=186.0
Q ss_pred CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCC
Q 002194 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLG 278 (954)
Q Consensus 199 DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~ 278 (954)
.+++|+|+.... .+.....|+++|++++..+.++..... +..++|||||+.|++.....
T Consensus 142 ~~~~l~~~s~~~---~~~~~~~i~i~d~~g~~~~~l~~~~~~-----v~~~~~Spdg~~la~~s~~~------------- 200 (415)
T 2hqs_A 142 FRTRIAYVVQTN---GGQFPYELRVSDYDGYNQFVVHRSPQP-----LMSPAWSPDGSKLAYVTFES------------- 200 (415)
T ss_dssp TTCEEEEEEECS---SSSCCEEEEEEETTSCSCEEEEEESSC-----EEEEEECTTSSEEEEEECTT-------------
T ss_pred CCCEEEEEEecC---CCCccceEEEEcCCCCCCEEEeCCCCc-----ceeeEEcCCCCEEEEEEecC-------------
Confidence 488999987521 111127999999998888888765443 67899999999999872100
Q ss_pred CceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcc
Q 002194 279 PKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYS 356 (954)
Q Consensus 279 ~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~ 356 (954)
+...|+++|+ +|+.+.+... ..+..++|||||++|+|+.....
T Consensus 201 ---------------------------------~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g-- 245 (415)
T 2hqs_A 201 ---------------------------------GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG-- 245 (415)
T ss_dssp ---------------------------------SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS--
T ss_pred ---------------------------------CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCC--
Confidence 2246999999 8887777765 67789999999999998874321
Q ss_pred cccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEE
Q 002194 357 FIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIY 436 (954)
Q Consensus 357 ~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~ 436 (954)
..+|++||+++++.+.++... ..+..++|||||+.|++.... +....||
T Consensus 246 --------~~~i~~~d~~~~~~~~l~~~~-------------~~~~~~~~spdg~~l~~~s~~----------~g~~~i~ 294 (415)
T 2hqs_A 246 --------SLNLYVMDLASGQIRQVTDGR-------------SNNTEPTWFPDSQNLAFTSDQ----------AGRPQVY 294 (415)
T ss_dssp --------SCEEEEEETTTCCEEECCCCS-------------SCEEEEEECTTSSEEEEEECT----------TSSCEEE
T ss_pred --------CceEEEEECCCCCEEeCcCCC-------------CcccceEECCCCCEEEEEECC----------CCCcEEE
Confidence 237999999988777766543 223578999999988887211 1234899
Q ss_pred EEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCee
Q 002194 437 TQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMR 516 (954)
Q Consensus 437 ~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 516 (954)
++++ .+++.+.++.....+..++|||||++|++....++ ...|++++++++ +...++... .+.. ++
T Consensus 295 ~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g-~~~i~~~d~~~~--~~~~l~~~~--~~~~------~~ 360 (415)
T 2hqs_A 295 KVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDLATG--GVQVLSSTF--LDET------PS 360 (415)
T ss_dssp EEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSS-CEEEEEEETTTC--CEEECCCSS--SCEE------EE
T ss_pred EEEC---CCCCEEEEecCCCcccCeEECCCCCEEEEEECcCC-ceEEEEEECCCC--CEEEecCCC--CcCC------eE
Confidence 9996 66677777666666778999999999999886643 367999999885 334444322 2222 78
Q ss_pred eccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcc
Q 002194 517 RTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (954)
Q Consensus 517 ~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 573 (954)
|+|||++|++..... ....||+||++++..++|+...+.
T Consensus 361 ~spdg~~l~~~s~~~------------------~~~~l~~~d~~g~~~~~l~~~~~~ 399 (415)
T 2hqs_A 361 LAPNGTMVIYSSSQG------------------MGSVLNLVSTDGRFKARLPATDGQ 399 (415)
T ss_dssp ECTTSSEEEEEEEET------------------TEEEEEEEETTSCCEEECCCSSSE
T ss_pred EcCCCCEEEEEEcCC------------------CccEEEEEECCCCcEEEeeCCCCC
Confidence 999999999987321 123699999999888888776643
No 26
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=5.6e-21 Score=215.36 Aligned_cols=326 Identities=12% Similarity=0.088 Sum_probs=203.2
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
+..++|||||++|+|+.. .++..+||++++++++.++++...... ...+.|||||+.|+|..
T Consensus 38 ~~~~~~SpdG~~l~~~~~------~~g~~~l~~~d~~~~~~~~l~~~~~~~----~~~~~~spdg~~l~~~~-------- 99 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGD------FDGNRNYYLLNLETQQAVQLTEGKGDN----TFGGFISTDERAFFYVK-------- 99 (396)
T ss_dssp TTSCCBCTTSCEEEEEEC------TTSSCEEEEEETTTTEEEECCCSSCBC----TTTCEECTTSSEEEEEE--------
T ss_pred eecCcCCCCCCEEEEEEe------cCCCceEEEEECCCCcEEEeecCCCCc----cccceECCCCCEEEEEE--------
Confidence 678999999999999874 345678999999999999887655431 23488999999999871
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-cc-ccc-----------
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AV-YTS----------- 336 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~-~~~----------- 336 (954)
...+||++++ +|+.+++... .. ...
T Consensus 100 -----------------------------------------~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 138 (396)
T 3c5m_A 100 -----------------------------------------NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK 138 (396)
T ss_dssp -----------------------------------------TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred -----------------------------------------cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence 1125888888 7776666542 11 111
Q ss_pred --------cccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc
Q 002194 337 --------LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS 408 (954)
Q Consensus 337 --------~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp 408 (954)
+.|||||+++++..... ......|+++|+++++.+.+.... ..+..+.|+|
T Consensus 139 ~~~~~~~~~~~spdg~~~~~~~~~~--------~~~~~~l~~~d~~~g~~~~~~~~~-------------~~~~~~~~sp 197 (396)
T 3c5m_A 139 LVGIEILKRDWQPLTSWEKFAEFYH--------TNPTCRLIKVDIETGELEVIHQDT-------------AWLGHPIYRP 197 (396)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHHH--------TCCCEEEEEEETTTCCEEEEEEES-------------SCEEEEEEET
T ss_pred cccccccccccCCCCcceeeeeecc--------CCCcceEEEEECCCCcEEeeccCC-------------cccccceECC
Confidence 45566666555443100 012348999999988777666421 2235688999
Q ss_pred -CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec--ccccCceeeccCCceEEEEEecccc-ceEEE
Q 002194 409 -DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWYKTR-RTRTW 484 (954)
Q Consensus 409 -Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~~~~~~spDg~~l~~~~~~~~~-~~~l~ 484 (954)
||+.|+|... ++.. .....||++++ ++++.+.+... ...+..++|||||++|+|.+...+. ...|+
T Consensus 198 ~dg~~l~~~~~--~~~~-----~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 198 FDDSTVGFCHE--GPHD-----LVDARMWLVNE---DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp TEEEEEEEEEC--SCSS-----SCSCCCEEEET---TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEec--CCCC-----CCCceEEEEEC---CCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 8988888732 1100 11257899996 66666777553 2346678999999999998765432 24599
Q ss_pred EEcCCCCCCCcEEEecCCCCCccCCCCCCCeeecc-CCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCC
Q 002194 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (954)
Q Consensus 485 ~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 563 (954)
++|+.++ +...+...... . +.|+| ||+++++..... + +.....+.........||+||+++++
T Consensus 268 ~~d~~~g--~~~~l~~~~~~--------~-~~~s~~dg~~l~~~~~~~--p---~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 268 KANPETL--ENEEVMVMPPC--------S-HLMSNFDGSLMVGDGCDA--P---VDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EECTTTC--CEEEEEECCSE--------E-EEEECSSSSEEEEEECCC---------------CCCCCCEEEEEETTTTB
T ss_pred EEECCCC--CeEEeeeCCCC--------C-CCccCCCCceEEEecCCc--c---eeeccccccccCCCCcEEEEecccCc
Confidence 9999875 44444432211 1 67999 999887754110 0 00000000001124579999999998
Q ss_pred eEEEeccCcc-cccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEee
Q 002194 564 KERIWESDKE-KYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (954)
Q Consensus 564 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt 625 (954)
.++|+..... ..+.. ........+.|||||+.+++..... ...++|.+++.+++.+.+.
T Consensus 332 ~~~l~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 332 AQKLCKHSTSWDVLDG--DRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp CCEEEECCCCCCCBTT--BSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTCC----
T ss_pred eEEccCCCCccccccc--cccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccccccccc
Confidence 8888765421 00000 0000112367999999998877654 3568999998887766554
No 27
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=4.6e-21 Score=216.07 Aligned_cols=325 Identities=14% Similarity=0.095 Sum_probs=203.5
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCc
Q 002194 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (954)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~ 190 (954)
...++|||||++|+|+... .+ . ..||++++.+ ++.++++.. ...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~----------------------~g--~------~~l~~~d~~~----~~~~~l~~~--~~~ 81 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF----------------------DG--N------RNYYLLNLET----QQAVQLTEG--KGD 81 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT----------------------TS--S------CEEEEEETTT----TEEEECCCS--SCB
T ss_pred eecCcCCCCCCEEEEEEec----------------------CC--C------ceEEEEECCC----CcEEEeecC--CCC
Confidence 5678999999999999763 11 1 3689999854 566666432 123
Q ss_pred cc-ceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 191 LN-FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 191 ~~-~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.. .+.|||||++|+|+.. ..+||++++++++.++++..+. .|++||+.|++........
T Consensus 82 ~~~~~~~spdg~~l~~~~~---------~~~l~~~d~~~~~~~~~~~~~~----------~~~~~g~~l~~~~~~~~~~- 141 (396)
T 3c5m_A 82 NTFGGFISTDERAFFYVKN---------ELNLMKVDLETLEEQVIYTVDE----------EWKGYGTWVANSDCTKLVG- 141 (396)
T ss_dssp CTTTCEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECCT----------TEEEEEEEEECTTSSEEEE-
T ss_pred ccccceECCCCCEEEEEEc---------CCcEEEEECCCCCcEEEEeccc----------ccCCCCCEEEeccCCcccc-
Confidence 33 4899999999999863 2379999999999888865443 2889999888751100000
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccc------cccceEEEEEe-CCceeEcCCC-ccccccccCC
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDY------YATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSP 341 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~------~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~Sp 341 (954)
... .......|+..+.+ .....||++++ +|+.+.+... ..+..+.|||
T Consensus 142 -----------~~~-------------~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp 197 (396)
T 3c5m_A 142 -----------IEI-------------LKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRP 197 (396)
T ss_dssp -----------EEE-------------EGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred -----------ccc-------------cccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECC
Confidence 000 00001111111111 13467999999 8877777654 5677899999
Q ss_pred -CCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002194 342 -DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (954)
Q Consensus 342 -DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~ 420 (954)
||++|+|.+.. +. ......|+++++++++.+.+...... ..+..++|||||+.|+|.....
T Consensus 198 ~dg~~l~~~~~~-~~------~~~~~~l~~~d~~~~~~~~l~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 198 FDDSTVGFCHEG-PH------DLVDARMWLVNEDGSNVRKIKEHAEG-----------ESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp TEEEEEEEEECS-CS------SSCSCCCEEEETTSCCCEESSCCCTT-----------EEEEEEEECTTSSCEEEEEEET
T ss_pred CCCCEEEEEecC-CC------CCCCceEEEEECCCCceeEeeccCCC-----------ccccceEECCCCCEEEEEecCC
Confidence 89999998742 11 11124799999988776666542100 1234689999999988873321
Q ss_pred cCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeecc-CCceEEEEEec------------cccceEEEEEc
Q 002194 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCD-DSLALVYESWY------------KTRRTRTWVIS 487 (954)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~sp-Dg~~l~~~~~~------------~~~~~~l~~~d 487 (954)
. .....|+++++ .+++.+.+...... . +.|+| ||+.|++.... ......||+++
T Consensus 260 ~--------~~~~~l~~~d~---~~g~~~~l~~~~~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 260 G--------QTDRVIYKANP---ETLENEEVMVMPPC-S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp T--------TCCEEEEEECT---TTCCEEEEEECCSE-E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEE
T ss_pred C--------CccceEEEEEC---CCCCeEEeeeCCCC-C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 1 11234999996 66676666544332 2 89999 99988875421 01236799999
Q ss_pred CCCCCCCcEEEecCCCCC------ccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCC
Q 002194 488 PGSKDVAPRILFDRSSED------VYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (954)
Q Consensus 488 ~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 561 (954)
++++ +.+.++...... ... ....++|+|||++|+|.... .....||.+|+++
T Consensus 327 ~~~~--~~~~l~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~s~~------------------~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 327 TKAK--SAQKLCKHSTSWDVLDGDRQI--THPHPSFTPNDDGVLFTSDF------------------EGVPAIYIADVPE 384 (396)
T ss_dssp TTTT--BCCEEEECCCCCCCBTTBSST--TCCCCEECTTSSEEEEEECT------------------TSSCEEEEEECCT
T ss_pred cccC--ceEEccCCCCccccccccccC--CCCCceEccCCCeEEEEecC------------------CCCceEEEEEEcc
Confidence 9886 344554433210 000 01116799999999998721 1245799999998
Q ss_pred CCeEEEe
Q 002194 562 GSKERIW 568 (954)
Q Consensus 562 g~~~~l~ 568 (954)
++.+.+.
T Consensus 385 ~~~~~~~ 391 (396)
T 3c5m_A 385 SYKHLEH 391 (396)
T ss_dssp TCC----
T ss_pred ccccccc
Confidence 8766543
No 28
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.88 E-value=3.1e-21 Score=214.14 Aligned_cols=244 Identities=14% Similarity=0.149 Sum_probs=166.8
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEc-CCCCC------------------CCCCCCccEEEEECCCCCcCcccCccccCCCC
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYL-PPGYD------------------PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPN 695 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~-P~~~~------------------~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~ 695 (954)
..+..+.+++.+.+| +.+.+|+ |+... ....++.|+||++|||++..+....
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~------- 130 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASS------- 130 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTB-------
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCch-------
Confidence 446678899998888 7788887 87531 1123468999999998654322111
Q ss_pred CCCCcccHHHHHHHHC-CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEeeChH
Q 002194 696 EFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG----VAHPS-KIAVGGHSYG 769 (954)
Q Consensus 696 ~~~~~~~~~~~~la~~-G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~----~~d~~-ri~l~G~S~G 769 (954)
.....++..|+++ ||+|+.++|+...++ .++..++|+.++++|+.++. .+|++ ||+|+|+|+|
T Consensus 131 ---~~~~~~~~~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~G 199 (365)
T 3ebl_A 131 ---TIYDSLCRRFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSG 199 (365)
T ss_dssp ---HHHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHH
T ss_pred ---hhHHHHHHHHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCcc
Confidence 0012355677775 999999887644322 23467899999999999764 68999 9999999999
Q ss_pred HHHHHHHHHhCCC---cccEEEEeccCCCCCCCCCCCc--------c--ccchhhhcH------HHHHhcCccc-ccCCC
Q 002194 770 AFMTANLLAHAPH---LFCCGIARSGAYNRTLTPFGFQ--------N--EDRTLWEAT------STYVEMSPFM-SANKL 829 (954)
Q Consensus 770 G~~a~~~a~~~p~---~~~a~v~~~~~~~~~~~~~~~~--------~--~~~~~~~~~------~~~~~~sp~~-~~~~~ 829 (954)
|++|+.++.+.++ .++++|+++|+++......... . .....|... ......+|+. ....+
T Consensus 200 G~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 279 (365)
T 3ebl_A 200 GNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL 279 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC
T ss_pred HHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Confidence 9999999987654 7999999999877432110000 0 000011000 0001112332 23344
Q ss_pred C----CCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC---CcccHHHHHHHHHHHHHHhcccCC
Q 002194 830 K----KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA---ARESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 830 ~----~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
+ .|+||+||+.|.. ..++.+++++|+..|+++++++||+++|.+. ..+...++++.+.+||+++++...
T Consensus 280 ~~~~~pP~Li~~G~~D~l----~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 280 GGLPFAKSLIIVSGLDLT----CDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp TTSCCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC---
T ss_pred ccCCCCCEEEEEcCcccc----hhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 4 5899999999965 4567899999999999999999999999875 345567899999999999986543
No 29
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=1.3e-20 Score=230.04 Aligned_cols=336 Identities=13% Similarity=0.121 Sum_probs=215.3
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCC
Q 002194 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (954)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~ 188 (954)
..+..++|||| ++++|.... .|++|++.+ ++.++++.. .
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~----------------------------------~i~~~d~~~----~~~~~l~~~--~ 120 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQG----------------------------------GLVGFDMLA----RKVTYLFDT--N 120 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETT----------------------------------EEEEEETTT----TEEEEEECC--T
T ss_pred cCceeEEECCC-CeEEEEECC----------------------------------EEEEEECCC----CceEEccCC--c
Confidence 35778999999 888888653 899999854 556666542 2
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCC-----CceeecccCCCccc-cc---------cccceeEec
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-----GKARPLFQSPDIYL-NA---------IFDNFVWVN 253 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~-----g~~~~lt~~~~~~~-~~---------~~~~~~wsp 253 (954)
..+..++|||||++|+|+. ..+||++++++ ++.++++......+ ++ .+..+.|||
T Consensus 121 ~~~~~~~~SpdG~~la~~~----------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp 190 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYVR----------NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP 190 (706)
T ss_dssp TCCTTCEECTTSSEEEEEE----------TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT
T ss_pred ccccCCcCCCCCCEEEEEE----------CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC
Confidence 4688899999999999964 36899999999 88888876654321 00 025899999
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-
Q 002194 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP- 331 (954)
Q Consensus 254 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~- 331 (954)
||+.|++...+...... ...... ......... ..++..+. -....+|+++|+ +|+.+.+...
T Consensus 191 Dg~~la~~~~d~~~~~~-~~~~~~-----~~~~~~~~~-------~~y~~~g~---~~~~~~l~~~d~~~~~~~~~~~~~ 254 (706)
T 2z3z_A 191 KGSCLAFYRMDQSMVKP-TPIVDY-----HPLEAESKP-------LYYPMAGT---PSHHVTVGIYHLATGKTVYLQTGE 254 (706)
T ss_dssp TSSEEEEEEEECTTSCC-EEEEEC-----CSSSCEEEE-------ECCCBTTS---CCCEEEEEEEETTTTEEEECCCCS
T ss_pred CCCEEEEEEECCCCCce-EEeecc-----CCCCCceEE-------eeCCCCCC---CCCeeEEEEEECCCCceEeeccCC
Confidence 99999988533222100 000000 000000000 00111000 013467999999 7877666532
Q ss_pred ---ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCc-eEEEeccCCCcccCCccccccccCccceeec
Q 002194 332 ---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (954)
Q Consensus 332 ---~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~ws 407 (954)
..+..++|||||++|++.+..... ....+++||++++ ..+.+......... .....++||
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~--------~~~~v~~~d~~~g~~~~~~~~~~~~~~~--------~~~~~~~~s 318 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQ--------NECKVNAYDAETGRFVRTLFVETDKHYV--------EPLHPLTFL 318 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTS--------CEEEEEEEETTTCCEEEEEEEEECSSCC--------CCCSCCEEC
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCC--------CeeEEEEEECCCCceeeEEEEccCCCeE--------CccCCceee
Confidence 456789999999999998754321 1237999999977 66655432111000 012467899
Q ss_pred c--CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCc-eeeccCCceEEEEEeccc-cceEE
Q 002194 408 S--DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGG-ISWCDDSLALVYESWYKT-RRTRT 483 (954)
Q Consensus 408 p--Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~-~~~spDg~~l~~~~~~~~-~~~~l 483 (954)
| ||+. ++.. .. ++..+||.++. +++..+.++.+.+.+.. ++|||||+.|++.+..++ ....|
T Consensus 319 p~~dg~~-l~~~-~~---------~g~~~l~~~~~---~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 319 PGSNNQF-IWQS-RR---------DGWNHLYLYDT---TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp TTCSSEE-EEEE-CT---------TSSCEEEEEET---TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred cCCCCEE-EEEE-cc---------CCccEEEEEEC---CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 9 9983 3331 11 23457888884 66677788777776665 799999999999886653 23689
Q ss_pred EEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCC
Q 002194 484 WVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (954)
Q Consensus 484 ~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 563 (954)
|.++++++ ..+.++.. ..+.. ++|||||+++++..... ...+.|++||+++++
T Consensus 385 ~~~d~~~~--~~~~l~~~--~~~~~------~~~spdg~~l~~~~~~~-----------------~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 385 YCIDIKGG--KTKDLTPE--SGMHR------TQLSPDGSAIIDIFQSP-----------------TVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEETTCC--CCEESCCS--SSEEE------EEECTTSSEEEEEEECS-----------------SCSCEEEEEESSSCE
T ss_pred EEEEcCCC--CceeccCC--CceEE------EEECCCCCEEEEEecCC-----------------CCCcEEEEEECCCCe
Confidence 99999885 34555421 22222 78999999999886321 123459999999887
Q ss_pred eEEEe
Q 002194 564 KERIW 568 (954)
Q Consensus 564 ~~~l~ 568 (954)
.+.++
T Consensus 438 ~~~~~ 442 (706)
T 2z3z_A 438 HTLLE 442 (706)
T ss_dssp EEEEE
T ss_pred Eeecc
Confidence 44443
No 30
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=8.1e-21 Score=215.38 Aligned_cols=249 Identities=14% Similarity=0.114 Sum_probs=182.0
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
..|++|++. + +..+.++... ..+..++|||||++|+|.+. .++...|+++|+++++.++++.....
T Consensus 159 ~~i~i~d~~--g--~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~------~~~~~~i~~~d~~tg~~~~l~~~~~~-- 224 (415)
T 2hqs_A 159 YELRVSDYD--G--YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTF------ESGRSALVIQTLANGAVRQVASFPRH-- 224 (415)
T ss_dssp EEEEEEETT--S--CSCEEEEEES--SCEEEEEECTTSSEEEEEEC------TTSSCEEEEEETTTCCEEEEECCSSC--
T ss_pred ceEEEEcCC--C--CCCEEEeCCC--CcceeeEEcCCCCEEEEEEe------cCCCcEEEEEECCCCcEEEeecCCCc--
Confidence 379999984 3 4556666533 46889999999999999874 33467999999999998888765542
Q ss_pred cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-
Q 002194 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (954)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~- 321 (954)
+..++|||||+.|+++... + +..+||++|+
T Consensus 225 ---~~~~~~spdg~~la~~~~~---------------------------------------~-------g~~~i~~~d~~ 255 (415)
T 2hqs_A 225 ---NGAPAFSPDGSKLAFALSK---------------------------------------T-------GSLNLYVMDLA 255 (415)
T ss_dssp ---EEEEEECTTSSEEEEEECT---------------------------------------T-------SSCEEEEEETT
T ss_pred ---ccCEEEcCCCCEEEEEEec---------------------------------------C-------CCceEEEEECC
Confidence 6689999999999977210 0 3456999999
Q ss_pred CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccC
Q 002194 322 DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (954)
Q Consensus 322 ~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g 400 (954)
+|+.++++.. ..+..++|||||++|++.+.... ...|++||+++++.+.++... ..
T Consensus 256 ~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~-------------~~ 312 (415)
T 2hqs_A 256 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEG-------------SQ 312 (415)
T ss_dssp TCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSS-------------SE
T ss_pred CCCEEeCcCCCCcccceEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCC-------------Cc
Confidence 8888888776 67788999999999999985321 227999999987766665432 12
Q ss_pred ccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccc
Q 002194 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (954)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (954)
+..++|||||+.|++.... +....|+++++ .+++.+.++... .+..++|+|||+.|++.+..++ .
T Consensus 313 ~~~~~~spdG~~l~~~~~~----------~g~~~i~~~d~---~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~ 377 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSN----------GGQQHIAKQDL---ATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-G 377 (415)
T ss_dssp EEEEEECTTSSEEEEEEEC----------SSCEEEEEEET---TTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETT-E
T ss_pred ccCeEECCCCCEEEEEECc----------CCceEEEEEEC---CCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-c
Confidence 3468999999988887221 12457999996 666777776554 6778999999999999887654 3
Q ss_pred eEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCC
Q 002194 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTG 521 (954)
Q Consensus 481 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG 521 (954)
..||+++++++ ....++. ....+.. ++|||--
T Consensus 378 ~~l~~~d~~g~--~~~~l~~-~~~~v~~------~~~~~~~ 409 (415)
T 2hqs_A 378 SVLNLVSTDGR--FKARLPA-TDGQVKF------PAWSPYL 409 (415)
T ss_dssp EEEEEEETTSC--CEEECCC-SSSEEEE------EEECCCC
T ss_pred cEEEEEECCCC--cEEEeeC-CCCCCcC------Ccccccc
Confidence 68999999874 3344433 2233333 7788754
No 31
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.87 E-value=2.5e-21 Score=206.88 Aligned_cols=237 Identities=14% Similarity=0.096 Sum_probs=165.2
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCC-CCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDP-SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (954)
+..+.+++. .+|..+.+.+|+|+.... ..+++.|+||++|||.+..+. ... ....+..|+++||.|
T Consensus 2 m~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~--------~~~----~~~~~~~l~~~G~~v 68 (277)
T 3bxp_A 2 MQVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHS--------GRE----EAPIATRMMAAGMHT 68 (277)
T ss_dssp EEEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCC--------CTT----HHHHHHHHHHTTCEE
T ss_pred cceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCC--------Ccc----chHHHHHHHHCCCEE
Confidence 345677774 577889999999973210 112358999999997533221 111 124566788899999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC------------
Q 002194 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA------------ 780 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~------------ 780 (954)
+.++++ |+|... . .....+.|+.++++++.++. .+|+++|+|+|||+||.+|+.++.+.
T Consensus 69 ~~~d~~---g~g~~~--~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 142 (277)
T 3bxp_A 69 VVLNYQ---LIVGDQ--S-VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLD 142 (277)
T ss_dssp EEEECC---CSTTTC--C-CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCT
T ss_pred EEEecc---cCCCCC--c-cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcc
Confidence 996554 444211 1 23466788999999998763 36788999999999999999999985
Q ss_pred --CCcccEEEEeccCCCCCCCCCCCccccchhh-hcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHH
Q 002194 781 --PHLFCCGIARSGAYNRTLTPFGFQNEDRTLW-EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (954)
Q Consensus 781 --p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~ 857 (954)
+.+++++|+++|..+.... +... .... .....+...+|...+.++.+|+|++||++|.++| ++++.+++++
T Consensus 143 ~~~~~~~~~v~~~p~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~ 216 (277)
T 3bxp_A 143 HYQGQHAAIILGYPVIDLTAG---FPTT-SAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVP--PINSLKYVQA 216 (277)
T ss_dssp TCCCCCSEEEEESCCCBTTSS---SSSS-HHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSC--THHHHHHHHH
T ss_pred cccCCcCEEEEeCCcccCCCC---CCCc-cccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccC--hHHHHHHHHH
Confidence 6789999999998763321 1110 0000 0001223457777778888999999999999998 9999999999
Q ss_pred HHhCCCcEEEEEeCCCCCcCCCcc--------------cHHHHHHHHHHHHHHhc
Q 002194 858 LKGHGALCRLVILPFESHGYAARE--------------SIMHVLWETDRWLQKYC 898 (954)
Q Consensus 858 l~~~g~~~~~~~~~~~~H~~~~~~--------------~~~~~~~~i~~fl~~~l 898 (954)
++..+.+++++++++++|.+.... ....+++.+.+||+++.
T Consensus 217 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 217 MLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 999999999999999999764332 24677889999998864
No 32
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=1.2e-20 Score=240.05 Aligned_cols=273 Identities=8% Similarity=-0.003 Sum_probs=190.6
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..|.|+|| +|+|+.. .++..+||.++.+++..++++.... +..+.|||||+.|++.
T Consensus 205 ~v~~~~~s~d--~l~~~~~------~dg~~~l~~~~~~g~~~~~l~~~~~------~~~~~~SpDG~~la~~-------- 262 (1045)
T 1k32_A 205 HVSSPVIVGH--RIYFITD------IDGFGQIYSTDLDGKDLRKHTSFTD------YYPRHLNTDGRRILFS-------- 262 (1045)
T ss_dssp CCEEEEEETT--EEEEEEC------TTSSCEEEEEETTSCSCEECCCCCS------SCEEEEEESSSCEEEE--------
T ss_pred cccceEEeCC--EEEEEEe------ccCceEEEEEeCCCCcceEecCCCC------cceeeEcCCCCEEEEE--------
Confidence 4556778876 7777653 4567899999998888888876553 4467999999999986
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC------------ccccc
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------------AVYTS 336 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~------------~~~~~ 336 (954)
....||++++ .+....+... ..+..
T Consensus 263 ------------------------------------------~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~ 300 (1045)
T 1k32_A 263 ------------------------------------------KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFA 300 (1045)
T ss_dssp ------------------------------------------ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGE
T ss_pred ------------------------------------------eCCEEEEecCCceEeeeeccCcccccccccccccccce
Confidence 1234666666 3444433331 25778
Q ss_pred cccC-CCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 337 LDPS-PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 337 ~~~S-pDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
++|| |||++|++.+ . .++++|++.++..+.+..... ..+..++|+ ||+.++|
T Consensus 301 ~~~S~pdG~~la~~~-~-------------~~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~s-dg~~l~~ 353 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-R-------------GQAFIQDVSGTYVLKVPEPLR------------IRYVRRGGD-TKVAFIH 353 (1045)
T ss_dssp EEEEECGGGCEEEEE-T-------------TEEEEECTTSSBEEECSCCSC------------EEEEEECSS-SEEEEEE
T ss_pred eeecCCCCCEEEEEE-c-------------CEEEEEcCCCCceEEccCCCc------------ceEEeeeEc-CCCeEEE
Confidence 9999 9999999988 1 289999998877666654321 034578999 9999888
Q ss_pred EEEeccCCCccccccCCCeEE-EEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCC
Q 002194 416 WAETQDGGDAKVEVTPRDIIY-TQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA 494 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~ 494 (954)
. +....+| ++++ ++++.+.++.....+..++|||||++|++.... ..|+++|+.++ +
T Consensus 354 ~-------------s~~~~l~~~~d~---~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~----~~v~~~d~~tg--~ 411 (1045)
T 1k32_A 354 G-------------TREGDFLGIYDY---RTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR----FEIMTVDLETG--K 411 (1045)
T ss_dssp E-------------ETTEEEEEEEET---TTCCEEECCCCCCSEEEEEECTTSSEEEEEETT----SEEEEEETTTC--C
T ss_pred E-------------ECCCceEEEEEC---CCCCceEecCCccceeeeEECCCCCEEEEECCC----CeEEEEECCCC--c
Confidence 7 2245788 8986 677777777555667889999999999988654 36889999885 4
Q ss_pred cEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccc
Q 002194 495 PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEK 574 (954)
Q Consensus 495 ~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 574 (954)
...+.......+.. ++|||||++|++.....+ +.........|++||+++++.+.++.....
T Consensus 412 ~~~~~~~~~~~v~~------~~~SpDG~~la~~~~~~~-----------~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~- 473 (1045)
T 1k32_A 412 PTVIERSREAMITD------FTISDNSRFIAYGFPLKH-----------GETDGYVMQAIHVYDMEGRKIFAATTENSH- 473 (1045)
T ss_dssp EEEEEECSSSCCCC------EEECTTSCEEEEEEEECS-----------STTCSCCEEEEEEEETTTTEEEECSCSSSB-
T ss_pred eEEeccCCCCCccc------eEECCCCCeEEEEecCcc-----------ccccCCCCCeEEEEECCCCcEEEeeCCCcc-
Confidence 45555333333333 889999999999874210 000001234699999999987777655422
Q ss_pred ccceeEEeccCCccccccccCCEEEEEEec
Q 002194 575 YYETTVALMSDQTEGDLYLNQLKILTSKES 604 (954)
Q Consensus 575 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s 604 (954)
.. .+.|||||+.+++....
T Consensus 474 ----~~-------~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 474 ----DY-------APAFDADSKNLYYLSYR 492 (1045)
T ss_dssp ----EE-------EEEECTTSCEEEEEESC
T ss_pred ----cC-------CceEcCCCCEEEEEecc
Confidence 11 25799999999886653
No 33
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.87 E-value=1.6e-20 Score=197.19 Aligned_cols=213 Identities=17% Similarity=0.169 Sum_probs=163.0
Q ss_pred ceE--EEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEE
Q 002194 638 QKE--LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (954)
Q Consensus 638 ~~~--~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (954)
+.| .+++++.+| ++.++++.|++ .+.|+||++||.+...+. .........+..|+++||.|
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~------~~~p~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~G~~v 82 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFGGT----------MNNQIVYQLFYLFQKRGFTT 82 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGTCC----------TTSHHHHHHHHHHHHTTCEE
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC------CCCCEEEEECCCcccCCC----------ccchHHHHHHHHHHHCCCEE
Confidence 345 889998888 89999998853 237999999995321110 00001124567788999999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCC
Q 002194 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (954)
+. .+.+|+|.+..........++|+.++++++.++. .++++++++|||+||.+++.++.++|+ ++++|+++|..+
T Consensus 83 ~~---~d~~g~G~s~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 157 (249)
T 2i3d_A 83 LR---FNFRSIGRSQGEFDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPN 157 (249)
T ss_dssp EE---ECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTT
T ss_pred EE---ECCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchh
Confidence 99 4556677665433222344599999999999885 477899999999999999999999988 999999998754
Q ss_pred CCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHh-CCCcEEEEEeCCCC
Q 002194 796 RTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG-HGALCRLVILPFES 874 (954)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~ 874 (954)
... ...+.++++|+|++||++|..+| .+.++++++.++. .+.+++++++++++
T Consensus 158 ~~~------------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 211 (249)
T 2i3d_A 158 TYD------------------------FSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGAN 211 (249)
T ss_dssp TSC------------------------CTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTCC
T ss_pred hhh------------------------hhhhcccCCCEEEEEcCCCCCCC--HHHHHHHHHHHhhccCCceeEEEECCCC
Confidence 210 12345678999999999999998 9999999999986 45689999999999
Q ss_pred CcCCCcccHHHHHHHHHHHHHHhccc
Q 002194 875 HGYAARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
|.+. +....+.+.+.+||++++..
T Consensus 212 H~~~--~~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 212 HFFN--GKVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp TTCT--TCHHHHHHHHHHHHHHHHTT
T ss_pred cccc--cCHHHHHHHHHHHHHHhcCC
Confidence 9985 56788899999999999864
No 34
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.86 E-value=5.3e-21 Score=210.75 Aligned_cols=236 Identities=16% Similarity=0.109 Sum_probs=170.0
Q ss_pred cCCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCc
Q 002194 634 LASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (954)
Q Consensus 634 ~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (954)
...+..+.+++++.+|.+|.++++.|++. .++.|+||++||+..... + ......|+++||
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~----~~~~p~vv~~HG~g~~~~------------~----~~~~~~l~~~G~ 122 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGRG------------F----PHDWLFWPSMGY 122 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCCC------------C----GGGGCHHHHTTC
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC----CCCccEEEEEcCCCCCCC------------C----chhhcchhhCCC
Confidence 34456889999999999999999999763 235899999999742211 1 112346788999
Q ss_pred EEEEcCCCCCCCCCC--cccc----------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChH
Q 002194 714 AILGGPTTPIIGEGD--EEAN----------------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYG 769 (954)
Q Consensus 714 ~V~~~~~~~~~G~G~--~~~~----------------------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~G 769 (954)
+|+.+++++..+.+. +... .......+.|+.++++++.+++.+|+++|+++|+|+|
T Consensus 123 ~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~G 202 (337)
T 1vlq_A 123 ICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQG 202 (337)
T ss_dssp EEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred EEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHH
Confidence 999966654432211 1111 1223578999999999999998889999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEeccCCCCCCC-----CCCCccccchhh--------hcHHHHHhcCcccccCCCCCCEEEE
Q 002194 770 AFMTANLLAHAPHLFCCGIARSGAYNRTLT-----PFGFQNEDRTLW--------EATSTYVEMSPFMSANKLKKPILLV 836 (954)
Q Consensus 770 G~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-----~~~~~~~~~~~~--------~~~~~~~~~sp~~~~~~~~~P~Lii 836 (954)
|.+++.++.+.| +++++|+.+|....... ...........+ .....+..++|...+.++++|+|++
T Consensus 203 G~la~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 281 (337)
T 1vlq_A 203 GGIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFS 281 (337)
T ss_dssp HHHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHhcCC-CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEE
Confidence 999999999997 59999998885432100 000000000000 0011234456777888999999999
Q ss_pred EeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
||++|.++| ++++.+++++++. +++++++++++|.+. .....+.+.+||.++|.
T Consensus 282 ~G~~D~~~p--~~~~~~~~~~l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 282 VGLMDNICP--PSTVFAAYNYYAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp EETTCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC
T ss_pred eeCCCCCCC--chhHHHHHHhcCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHh
Confidence 999999998 9999999888764 589999999999963 23567889999999985
No 35
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=9.7e-21 Score=225.41 Aligned_cols=295 Identities=9% Similarity=0.012 Sum_probs=195.5
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCcee
Q 002194 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (954)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~ 180 (954)
.++.+... ++..++|||||++|||++.. + +.+.||.+.+ ++.+
T Consensus 15 ~~~~~~~~-~~~~~~~~~DG~~la~~s~~----------------------~----------g~~~lw~~~~----g~~~ 57 (582)
T 3o4h_A 15 DVERLIAV-EKYSLQGVVDGDKLLVVGFS----------------------E----------GSVNAYLYDG----GETV 57 (582)
T ss_dssp HHHHHHHS-CEEEEEEEETTTEEEEEEEE----------------------T----------TEEEEEEEET----TEEE
T ss_pred HHHHHhcc-chheeecCCCCCeEEEEEcc----------------------C----------CceeEEEEcC----CCcE
Confidence 34455555 57889999999999998862 1 2455666633 6777
Q ss_pred eeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEEC--CCCceeecccCCCccccccccceeEecCCeEE
Q 002194 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV--DTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (954)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~--~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (954)
+++... ...+..|+|||| +|+|+... ..++...+||++++ +++.. +++.... ....+|+|||+.+
T Consensus 58 ~lt~~~-~~~~~~~~~spd--~~l~~~~~---~~g~~~~~l~~~~~~~~g~~~-~l~~~~~------~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 58 KLNREP-INSVLDPHYGVG--RVILVRDV---SKGAEQHALFKVNTSRPGEEQ-RLEAVKP------MRILSGVDTGEAV 124 (582)
T ss_dssp ECCSSC-CSEECEECTTCS--EEEEEEEC---STTSCCEEEEEEETTSTTCCE-ECTTSCS------BEEEEEEECSSCE
T ss_pred eeeccc-ccccccccCCCC--eEEEEecc---CCCCcceEEEEEeccCCCccc-cccCCCC------ceeeeeCCCCCeE
Confidence 776532 136889999999 68887752 12345679999998 65544 6765544 3367899999887
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCCcccccc
Q 002194 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSL 337 (954)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~~~~~~~ 337 (954)
+++.. ....++++++ +|+.++++.... .++
T Consensus 125 ~~~s~------------------------------------------------~~~~~~l~d~~~g~~~~l~~~~~-~~~ 155 (582)
T 3o4h_A 125 VFTGA------------------------------------------------TEDRVALYALDGGGLRELARLPG-FGF 155 (582)
T ss_dssp EEEEE------------------------------------------------CSSCEEEEEEETTEEEEEEEESS-CEE
T ss_pred EEEec------------------------------------------------CCCCceEEEccCCcEEEeecCCC-ceE
Confidence 76621 0112335588 888887776532 789
Q ss_pred ccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002194 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (954)
Q Consensus 338 ~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~ 417 (954)
+|||||++|++.+.+.... ..|++||+++++.+.++.... ....++|||||+.|+..
T Consensus 156 ~~spDG~~la~~~~~~~~~---------~~i~~~d~~~g~~~~l~~~~~-------------~~~~~~~SpDG~~l~~~- 212 (582)
T 3o4h_A 156 VSDIRGDLIAGLGFFGGGR---------VSLFTSNLSSGGLRVFDSGEG-------------SFSSASISPGMKVTAGL- 212 (582)
T ss_dssp EEEEETTEEEEEEEEETTE---------EEEEEEETTTCCCEEECCSSC-------------EEEEEEECTTSCEEEEE-
T ss_pred EECCCCCEEEEEEEcCCCC---------eEEEEEcCCCCCceEeecCCC-------------ccccceECCCCCEEEEc-
Confidence 9999999999988653211 279999999888888776432 23578999999988722
Q ss_pred EeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCcee--------eccCCceEEEEEeccccceEEEEEcCC
Q 002194 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGIS--------WCDDSLALVYESWYKTRRTRTWVISPG 489 (954)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~--------~spDg~~l~~~~~~~~~~~~l~~~d~~ 489 (954)
.. +....|+++++ ++++.+.++..+..+..++ ||||| .+++....++ ..+||.+
T Consensus 213 -~~---------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g-~~~l~~~--- 274 (582)
T 3o4h_A 213 -ET---------AREARLVTVDP---RDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREG-RSAVFID--- 274 (582)
T ss_dssp -EC---------SSCEEEEEECT---TTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETT-EEEEEET---
T ss_pred -cC---------CCeeEEEEEcC---CCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCC-cEEEEEE---
Confidence 11 22347999996 6677665555666667778 99999 7777766554 3677776
Q ss_pred CCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEE
Q 002194 490 SKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (954)
Q Consensus 490 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 567 (954)
+ +... .....+.+ ++|| ||++++..... ...+.||++|+++ +.++|
T Consensus 275 -g--~~~~---~~~~~v~~------~~~s-dg~~l~~~s~~------------------~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 275 -G--ERVE---APQGNHGR------VVLW-RGKLVTSHTSL------------------STPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp -T--EEEC---CCSSEEEE------EEEE-TTEEEEEEEET------------------TEEEEEEEETTCC-EEECC
T ss_pred -C--Ceec---cCCCceEE------EEec-CCEEEEEEcCC------------------CCCCeEEEEcCCC-ceEEE
Confidence 2 1111 11122222 7789 88877554421 1235689999876 55555
No 36
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.86 E-value=6.5e-21 Score=205.08 Aligned_cols=232 Identities=16% Similarity=0.125 Sum_probs=171.5
Q ss_pred ceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 638 ~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
..+.++++. +|.++.++++.|+ +.|+||++||++.. ... ...++..|+++||.|+.
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~~-----------~~~----~~~~~~~l~~~g~~v~~ 60 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGGS-----------QHH----SLVRAREAVGLGCICMT 60 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTCC-----------TTT----THHHHHHHHTTTCEEEC
T ss_pred ceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCCC-----------cCc----HHHHHHHHHHCCCEEEE
Confidence 456777876 7899999999986 27999999997421 111 22456778889999999
Q ss_pred cCCCCCCCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCC
Q 002194 718 GPTTPIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (954)
.+..|+|.+.... ......++|+.++++++.+++.+|+++|+|+|||+||.+++.++.++| ++++++++|...
T Consensus 61 ---~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~ 135 (290)
T 3ksr_A 61 ---FDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALY 135 (290)
T ss_dssp ---CCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCC
T ss_pred ---eecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchh
Confidence 5666777765432 245677899999999999988888899999999999999999999987 788888888654
Q ss_pred CCCCCCCCcccc-------chhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002194 796 RTLTPFGFQNED-------RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (954)
Q Consensus 796 ~~~~~~~~~~~~-------~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (954)
... .|...... ...+.....+...++...+.++++|+|++||+.|..++ ..++.++++.++..+ +++++
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~~~~-~~~~~ 211 (290)
T 3ksr_A 136 KDA-HWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVP--HPVMRNYADAFTNAR-SLTSR 211 (290)
T ss_dssp CSS-CTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSC--HHHHHHHHHHTTTSS-EEEEE
T ss_pred hhh-hhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccC--hHHHHHHHHHhccCC-CceEE
Confidence 221 11111000 00001111111222334556788999999999999998 999999999987765 78999
Q ss_pred EeCCCCCcCCCcccHHHHHHHHHHHHHHhcccCC
Q 002194 869 ILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 869 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
++++++|.+........+.+.+.+||++++....
T Consensus 212 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~ 245 (290)
T 3ksr_A 212 VIAGADHALSVKEHQQEYTRALIDWLTEMVVGRR 245 (290)
T ss_dssp EETTCCTTCCSHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EcCCCCCCCCcchHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999986666677888999999999986543
No 37
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.86 E-value=1.3e-20 Score=214.10 Aligned_cols=221 Identities=19% Similarity=0.200 Sum_probs=157.6
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcc
Q 002194 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE 730 (954)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~ 730 (954)
.+.+++|.|++ .++.|+||++||+... .....+..|+++||.|+++++++ +|.+.
T Consensus 144 ~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~-----------------~~~~~a~~La~~Gy~V~a~D~rG---~g~~~ 198 (422)
T 3k2i_A 144 RVRATLFLPPG-----PGPFPGIIDIFGIGGG-----------------LLEYRASLLAGHGFATLALAYYN---FEDLP 198 (422)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCTTCS-----------------CCCHHHHHHHTTTCEEEEEECSS---STTSC
T ss_pred cEEEEEEcCCC-----CCCcCEEEEEcCCCcc-----------------hhHHHHHHHHhCCCEEEEEccCC---CCCCC
Confidence 58999999975 3458999999996311 01134778899999999966654 44332
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccc----
Q 002194 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE---- 806 (954)
Q Consensus 731 ~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~---- 806 (954)
.. .....++|+.+++++|.++..+|+++|+|+||||||.+|+.++.++|+ ++++|+++|........+.+...
T Consensus 199 ~~--~~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 275 (422)
T 3k2i_A 199 NN--MDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPP 275 (422)
T ss_dssp SS--CSCEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECC
T ss_pred CC--cccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCC
Confidence 21 111236788999999999988899999999999999999999999987 99999998875322211111000
Q ss_pred -----------------cchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHH-HHHHHHHHhCCCc-EEE
Q 002194 807 -----------------DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGAL-CRL 867 (954)
Q Consensus 807 -----------------~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~-~~~~~~l~~~g~~-~~~ 867 (954)
....+.........+....+.++++|+|++||++|.++| .... +.+.++|+..+++ +++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 353 (422)
T 3k2i_A 276 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWR--SELYAQTVSERLQAHGKEKPQI 353 (422)
T ss_dssp CCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCC--HHHHHHHHHHHHHhcCCCCCEE
Confidence 000011111111223334567889999999999999998 7755 6899999999988 999
Q ss_pred EEeCCCCCcCCC---------------------------cccHHHHHHHHHHHHHHhcccC
Q 002194 868 VILPFESHGYAA---------------------------RESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 868 ~~~~~~~H~~~~---------------------------~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
++||+++|.+.. .+..++.++.+++||+++|...
T Consensus 354 ~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 354 ICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp EEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999732 1446778999999999999754
No 38
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.86 E-value=1.5e-20 Score=210.45 Aligned_cols=226 Identities=17% Similarity=0.219 Sum_probs=166.7
Q ss_pred ceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
..+.++|.+. +|..+.+++|+|+++++.+ ++|+||++||++........+.... ..+..+ .........|+.|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~--~~Pvvv~lHG~g~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~vv 217 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDR--KYPLVVFLHGAGERGTDNYLQVAGN-RGAVVW--AQPRYQVVHPCFVL 217 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTS--CEEEEEEECCGGGCSSSSSHHHHSS-TTTTGG--GSHHHHTTSCCEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCC--CccEEEEECCCCCCCCchhhhhhcc-ccceee--cCccccccCCEEEE
Confidence 3577889988 9999999999999876544 4999999999854322211111100 001111 11223456889999
Q ss_pred EcCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 717 GGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
.+++++..++|..+.. .......+.|+.++++++.++..+|++||+|+||||||++++.++.++|++|+++|+++|.
T Consensus 218 ~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 218 APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp EECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred EecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 9888766666554321 1122456788999999999987799999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCC-CCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC
Q 002194 794 YNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (954)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 872 (954)
.+ + ..+.++. +|+|++||+.|..+| ++++++++++|+..|.++++++||+
T Consensus 298 ~~--------------------------~-~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~~ 348 (380)
T 3doh_A 298 GD--------------------------V-SKVERIKDIPIWVFHAEDDPVVP--VENSRVLVKKLAEIGGKVRYTEYEK 348 (380)
T ss_dssp CC--------------------------G-GGGGGGTTSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEECT
T ss_pred CC--------------------------h-hhhhhccCCCEEEEecCCCCccC--HHHHHHHHHHHHHCCCceEEEEecC
Confidence 41 1 1122333 899999999999999 9999999999999999999999999
Q ss_pred C---CCcCCCcccHHHHHH--HHHHHHHHh
Q 002194 873 E---SHGYAARESIMHVLW--ETDRWLQKY 897 (954)
Q Consensus 873 ~---~H~~~~~~~~~~~~~--~i~~fl~~~ 897 (954)
+ +|++.........+. .+++||.++
T Consensus 349 ~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 349 GFMEKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp THHHHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred CcccCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 8 444433334455556 889999875
No 39
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.86 E-value=3.4e-20 Score=203.19 Aligned_cols=233 Identities=15% Similarity=0.152 Sum_probs=165.4
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (954)
+..+.+++++.+| .|.+++|.|++. +.|+||++|||++..+. ...+ ......|++ .||.|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~------~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~V 121 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPT------SQATLYYLHGGGFILGN--------LDTH----DRIMRLLARYTGCTV 121 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSS------CSCEEEEECCSTTTSCC--------TTTT----HHHHHHHHHHHCSEE
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCC------CCcEEEEECCCCcccCC--------hhhh----HHHHHHHHHHcCCEE
Confidence 4458899999898 899999999741 24999999998644322 1122 235666777 79999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCCc------ccE
Q 002194 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL------FCC 786 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~------~~a 786 (954)
+..+++...++ .+...++|+.++++|+.++. .+|++||+|+|+|+||++|+.++.+.++. +++
T Consensus 122 ~~~dyr~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 193 (326)
T 3ga7_A 122 IGIDYSLSPQA--------RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIA 193 (326)
T ss_dssp EEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEE
T ss_pred EEeeCCCCCCC--------CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceE
Confidence 99777644332 23456799999999999873 57999999999999999999999887654 899
Q ss_pred EEEeccCCCCCCCCCC--Ccccc-chhhhcHHH----H-----HhcCccc-----ccCCCCCCEEEEEeCCCCCCCCchH
Q 002194 787 GIARSGAYNRTLTPFG--FQNED-RTLWEATST----Y-----VEMSPFM-----SANKLKKPILLVHGEEDNNSGTLTM 849 (954)
Q Consensus 787 ~v~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~----~-----~~~sp~~-----~~~~~~~P~Lii~G~~D~~v~~~~~ 849 (954)
+|+.+|+++....... +.... ......... | ...+|.. .+.+...|+||+||+.|.++ .
T Consensus 194 ~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~----~ 269 (326)
T 3ga7_A 194 ILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI----D 269 (326)
T ss_dssp EEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH----H
T ss_pred EEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH----H
Confidence 9999998764321100 00000 000000000 1 1112221 22335569999999999874 5
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc----ccHHHHHHHHHHHHHHhccc
Q 002194 850 QSDRFFNALKGHGALCRLVILPFESHGYAAR----ESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 850 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~~l~~ 900 (954)
++.+++++|+..|+++++++||+++|++... +...++++.+.+||.+++..
T Consensus 270 ~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 270 DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 8899999999999999999999999998432 34578889999999999853
No 40
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.85 E-value=1e-20 Score=216.00 Aligned_cols=221 Identities=14% Similarity=0.194 Sum_probs=155.5
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcc
Q 002194 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE 730 (954)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~ 730 (954)
.+.+++|+|++ .++.|+||++||+... .....+..|+++||.|+++++++..+.....
T Consensus 160 ~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~-----------------~~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~ 217 (446)
T 3hlk_A 160 RVRGTLFLPPE-----PGPFPGIVDMFGTGGG-----------------LLEYRASLLAGKGFAVMALAYYNYEDLPKTM 217 (446)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCSSCS-----------------CCCHHHHHHHTTTCEEEEECCSSSTTSCSCC
T ss_pred eEEEEEEeCCC-----CCCCCEEEEECCCCcc-----------------hhhHHHHHHHhCCCEEEEeccCCCCCCCcch
Confidence 58999999975 3458999999996311 0113477889999999996666543322211
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccc----
Q 002194 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE---- 806 (954)
Q Consensus 731 ~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~---- 806 (954)
.. ..++|+.+++++|.++..+|+++|+|+||||||.+|+.++.++|+ ++++|+++|........+.+...
T Consensus 218 ~~-----~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
T 3hlk_A 218 ET-----LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPP 291 (446)
T ss_dssp SE-----EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECC
T ss_pred hh-----CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCc
Confidence 11 237888999999999988999999999999999999999999987 99999998865322111100000
Q ss_pred -----------------cchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHH-HHHHHHHHHhCCCc-EEE
Q 002194 807 -----------------DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHGAL-CRL 867 (954)
Q Consensus 807 -----------------~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~-~~~~~~~l~~~g~~-~~~ 867 (954)
....+..............+.++++|+|++||++|.++| ..+ +.+++++|+..|++ +++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 369 (446)
T 3hlk_A 292 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWK--SEFYANEACKRLQAHGRRKPQI 369 (446)
T ss_dssp CCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcC--hHHHHHHHHHHHHHcCCCCcEE
Confidence 000011111011112223467788999999999999998 745 47899999999988 899
Q ss_pred EEeCCCCCcCC---------------------------CcccHHHHHHHHHHHHHHhcccC
Q 002194 868 VILPFESHGYA---------------------------ARESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 868 ~~~~~~~H~~~---------------------------~~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
++||+++|.+. ..++..+.++.+++||+++|...
T Consensus 370 ~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 370 ICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp EEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999983 12235678899999999999653
No 41
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.85 E-value=1.2e-20 Score=205.98 Aligned_cols=221 Identities=16% Similarity=0.061 Sum_probs=155.2
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCCCCc
Q 002194 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDE 729 (954)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~ 729 (954)
.+++++|.|++ .++.|+||++|||.+..+.. .. ...+...|+. .||.|+.++++...++
T Consensus 66 ~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~g~~--------~~----~~~~~~~la~~~g~~vv~~dyr~~p~~--- 125 (322)
T 3fak_A 66 GCAAEWVRAPG-----CQAGKAILYLHGGGYVMGSI--------NT----HRSMVGEISRASQAAALLLDYRLAPEH--- 125 (322)
T ss_dssp TEEEEEEECTT-----CCTTCEEEEECCSTTTSCCH--------HH----HHHHHHHHHHHHTSEEEEECCCCTTTS---
T ss_pred CeEEEEEeCCC-----CCCccEEEEEcCCccccCCh--------HH----HHHHHHHHHHhcCCEEEEEeCCCCCCC---
Confidence 38899999975 23589999999986432211 11 1134455665 6999999777643322
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc----ccEEEEeccCCCCCCCCCCCc-
Q 002194 730 EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQ- 804 (954)
Q Consensus 730 ~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~~~~~~~~~~~- 804 (954)
.++..++|+.++++|+.++ .+|++||+|+|+|+||++|+.++.+.++. ++++|+++|+++.......+.
T Consensus 126 -----~~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 199 (322)
T 3fak_A 126 -----PFPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT 199 (322)
T ss_dssp -----CTTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH
Confidence 2356779999999999998 67999999999999999999999886554 999999999987543211110
Q ss_pred --------cccchhhhcHHHH--------HhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002194 805 --------NEDRTLWEATSTY--------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (954)
Q Consensus 805 --------~~~~~~~~~~~~~--------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (954)
......|- ...| ...+|+....+...|+||+||+.|.+ ..++.+++++|+..|++++++
T Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~----~~~~~~~~~~l~~~g~~~~~~ 274 (322)
T 3fak_A 200 RAEADPMVAPGGINKM-AARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL----LDDSIKLDAKAKADGVKSTLE 274 (322)
T ss_dssp TTTTCCSCCSSHHHHH-HHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEE
T ss_pred hCccCcccCHHHHHHH-HHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc----HHHHHHHHHHHHHcCCCEEEE
Confidence 00000000 0111 12244432222235999999999976 578899999999999999999
Q ss_pred EeCCCCCcCCC----cccHHHHHHHHHHHHHHhcccCC
Q 002194 869 ILPFESHGYAA----RESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 869 ~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
+||+++|.+.. .+...++++.+.+||++++....
T Consensus 275 ~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3fak_A 275 IWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAALA 312 (322)
T ss_dssp EETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC--
T ss_pred EeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcch
Confidence 99999998743 33467888999999999987543
No 42
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.85 E-value=1.2e-20 Score=196.21 Aligned_cols=207 Identities=15% Similarity=0.094 Sum_probs=157.4
Q ss_pred EEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcC
Q 002194 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (954)
Q Consensus 640 ~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (954)
+.+++++.+|.++.++++.|++ ++.|+||++||+... .......+..|+++||.|+.++
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~------~~~p~vv~~hG~~~~---------------~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK------APAPVIVIAQDIFGV---------------NAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS------CSEEEEEEECCTTBS---------------CHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEecCCCCeEEEEEECCCC------CCCCEEEEEcCCCCC---------------CHHHHHHHHHHHhCCcEEEecc
Confidence 3466788899999999999863 248999999996311 0111245667888999999954
Q ss_pred CCCCCCCCCccc-----------------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC
Q 002194 720 TTPIIGEGDEEA-----------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (954)
Q Consensus 720 ~~~~~G~G~~~~-----------------~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 782 (954)
. .|+|.+.. .........+|+.++++++.++..++ ++++++|||+||.+++.++.++|
T Consensus 63 ~---~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~- 137 (236)
T 1zi8_A 63 L---YARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY- 137 (236)
T ss_dssp G---GGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC-
T ss_pred c---cccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC-
Confidence 4 44444321 11223456889999999998876544 69999999999999999999997
Q ss_pred cccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCC
Q 002194 783 LFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG 862 (954)
Q Consensus 783 ~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g 862 (954)
++++++.+|... .++...+.++++|+|++||++|..+| .+.++++++.++..+
T Consensus 138 -~~~~v~~~~~~~------------------------~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~ 190 (236)
T 1zi8_A 138 -VDRAVGYYGVGL------------------------EKQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFGANP 190 (236)
T ss_dssp -SSEEEEESCSSG------------------------GGCGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHTTCT
T ss_pred -ccEEEEecCccc------------------------ccchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHHHHhCC
Confidence 999998887421 01234556778999999999999998 999999999997765
Q ss_pred CcEEEEEeCCCCCcCCCcc-------cHHHHHHHHHHHHHHhccc
Q 002194 863 ALCRLVILPFESHGYAARE-------SIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 863 ~~~~~~~~~~~~H~~~~~~-------~~~~~~~~i~~fl~~~l~~ 900 (954)
+++++++++++|.+.... ..+.+++.+.+||+++++.
T Consensus 191 -~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 191 -LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp -TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred -CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 799999999999875432 2457888999999998754
No 43
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.85 E-value=1.5e-20 Score=208.01 Aligned_cols=230 Identities=13% Similarity=0.105 Sum_probs=165.8
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcE
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (954)
.....+.+++.+.+|.+|+++++.|++ .++.|+||++||++.... .|. ....++++||.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~~~-----------~~~-----~~~~~~~~G~~ 136 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNSG-----------DWN-----DKLNYVAAGFT 136 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCCSC-----------CSG-----GGHHHHTTTCE
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCCCC-----------Chh-----hhhHHHhCCcE
Confidence 345678899999999999999999975 235899999999753211 111 12367899999
Q ss_pred EEEcCCCCCCCCCCc-------------------ccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 002194 715 ILGGPTTPIIGEGDE-------------------EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (954)
Q Consensus 715 V~~~~~~~~~G~G~~-------------------~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~ 775 (954)
|+++++++..+.+.. .....++...+.|+.++++++..+..+|+++|+++|+|+||.+++.
T Consensus 137 v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~ 216 (346)
T 3fcy_A 137 VVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLA 216 (346)
T ss_dssp EEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred EEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHH
Confidence 999655543322211 1122345677899999999999988889999999999999999999
Q ss_pred HHHhCCCcccEEEEeccCCCCCCCCCCCc--ccc---------------chhhhcHHHHHhcCcccccCCCCCCEEEEEe
Q 002194 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQ--NED---------------RTLWEATSTYVEMSPFMSANKLKKPILLVHG 838 (954)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G 838 (954)
+++++|+ ++++|+++|+.......+... ... .........+...++...+.++++|+|+++|
T Consensus 217 ~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G 295 (346)
T 3fcy_A 217 CAALEPR-VRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVG 295 (346)
T ss_dssp HHHHSTT-CCEEEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEE
T ss_pred HHHhCcc-ccEEEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEee
Confidence 9999987 999999998754210000000 000 0000111223334556677889999999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
+.|.++| +..+.++++++.. +++++++|+++|.+. ..+.+.+.+||++
T Consensus 296 ~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~ 343 (346)
T 3fcy_A 296 LMDQVCP--PSTVFAAYNNIQS---KKDIKVYPDYGHEPM-----RGFGDLAMQFMLE 343 (346)
T ss_dssp TTCSSSC--HHHHHHHHTTCCS---SEEEEEETTCCSSCC-----TTHHHHHHHHHHT
T ss_pred CCCCcCC--HHHHHHHHHhcCC---CcEEEEeCCCCCcCH-----HHHHHHHHHHHHH
Confidence 9999998 8888888876643 689999999999985 3557788999976
No 44
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.85 E-value=5.7e-21 Score=204.43 Aligned_cols=239 Identities=20% Similarity=0.189 Sum_probs=158.8
Q ss_pred ceEEEEEEc-CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 638 QKELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~~~-~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
..+.+++.+ .+|.++.+.+|+|+++++.+ ++|+||++||+...... |.... .....+++.||+|+
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~p~vv~lHG~~~~~~~-----------~~~~~-~~~~~~~~~g~~vv 81 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTGA--KVPVLYWLSGLTCSDEN-----------FMQKA-GAQRLAAELGIAIV 81 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTTC--CEEEEEEECCTTCCSSH-----------HHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCCC--CccEEEEecCCCCChhH-----------Hhhcc-cHHHHHhhCCeEEE
Confidence 345666655 47899999999999875433 59999999997432111 10000 12345667899999
Q ss_pred EcCCCCCC-----------CCCCcccc----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 002194 717 GGPTTPII-----------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (954)
Q Consensus 717 ~~~~~~~~-----------G~G~~~~~----------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~ 775 (954)
.++.++.. |.|.++.. ..+.....+|+ ++++.+...+ +++++|+|||+||++|+.
T Consensus 82 ~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~l~G~S~GG~~a~~ 157 (280)
T 3i6y_A 82 APDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNEL---PELIESMFPV-SDKRAIAGHSMGGHGALT 157 (280)
T ss_dssp EECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHH---HHHHHHHSSE-EEEEEEEEETHHHHHHHH
T ss_pred EeCCcccccccCcccccccccCccccccccCCCccchhhHHHHHHHHH---HHHHHHhCCC-CCCeEEEEECHHHHHHHH
Confidence 96643110 11221110 01122233343 4445444434 679999999999999999
Q ss_pred HHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCC--CCEEEEEeCCCCCCCCchHH-HH
Q 002194 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQ-SD 852 (954)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~~-~~ 852 (954)
++.++|++|+++|+++|.++....++...............+...+|...+.+++ +|+||+||+.|.+++ ... ++
T Consensus 158 ~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~ 235 (280)
T 3i6y_A 158 IALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLA--EQLKPE 235 (280)
T ss_dssp HHHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHH--HHTCHH
T ss_pred HHHhCCccccEEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCcccc--chhhHH
Confidence 9999999999999999987643221110000000111223344566666666665 799999999999986 544 89
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 853 RFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 853 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+++++|+..|+++++++||+++|.+. .....+.++++|+.++|+
T Consensus 236 ~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 236 VLEAAASSNNYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 99999999999999999999999863 234567888999999874
No 45
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.85 E-value=2.5e-20 Score=203.16 Aligned_cols=230 Identities=15% Similarity=0.135 Sum_probs=165.0
Q ss_pred CCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEE
Q 002194 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (954)
Q Consensus 636 ~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (954)
....+.+++++.+|..+.++++.|++ .++.|+||++||+.... .........++++||.|
T Consensus 53 ~~~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~~---------------~~~~~~~~~l~~~g~~v 112 (318)
T 1l7a_A 53 GVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASY---------------DGEIHEMVNWALHGYAT 112 (318)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCS---------------GGGHHHHHHHHHTTCEE
T ss_pred CeEEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCCC---------------CCCcccccchhhCCcEE
Confidence 34578889998899999999999975 23589999999974210 00112334778899999
Q ss_pred EEcCCCCCCCCCCcccc--------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 002194 716 LGGPTTPIIGEGDEEAN--------------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~--------------------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~ 775 (954)
+.++++ |+|.+... ..++...+.|+.+++++|.++..+|+++|+++|||+||.+++.
T Consensus 113 ~~~d~r---g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 189 (318)
T 1l7a_A 113 FGMLVR---GQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIA 189 (318)
T ss_dssp EEECCT---TTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHH
T ss_pred EEecCC---CCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHH
Confidence 996554 44443221 1124678999999999999998888899999999999999999
Q ss_pred HHHhCCCcccEEEEeccCCCCCC------CCCCCccccch------hhhc---HHHHHhcCcccccCCCCCCEEEEEeCC
Q 002194 776 LLAHAPHLFCCGIARSGAYNRTL------TPFGFQNEDRT------LWEA---TSTYVEMSPFMSANKLKKPILLVHGEE 840 (954)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~------~~~~~~~~~~~------~~~~---~~~~~~~sp~~~~~~~~~P~Lii~G~~ 840 (954)
++.++|+ ++++|+.+|...... ....+...... .... .......++...+.++++|+|++||++
T Consensus 190 ~a~~~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~ 268 (318)
T 1l7a_A 190 AAALSDI-PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLI 268 (318)
T ss_dssp HHHHCSC-CSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETT
T ss_pred HhccCCC-ccEEEecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccC
Confidence 9999976 788888887543100 00000000000 0000 111223456667788899999999999
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 841 DNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 841 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
|..+| ++++.++++++.. +++++++++++|... .+..+.+.+||.++++
T Consensus 269 D~~~~--~~~~~~~~~~l~~---~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 269 DKVTP--PSTVFAAYNHLET---KKELKVYRYFGHEYI-----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp CSSSC--HHHHHHHHHHCCS---SEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred CCCCC--cccHHHHHhhcCC---CeeEEEccCCCCCCc-----chhHHHHHHHHHHHhC
Confidence 99998 8899888887754 489999999999842 4567889999999875
No 46
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.85 E-value=4.7e-21 Score=205.45 Aligned_cols=239 Identities=17% Similarity=0.122 Sum_probs=165.7
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCC-CCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCc
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYD-PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~-~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (954)
...+.+.+.+...+|..+...+| |+... ....++.|+||++|||++..+.. ......+..|+++||
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~------------~~~~~~~~~l~~~G~ 81 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPV------------AQAESLAMAFAGHGY 81 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCH------------HHHHHHHHHHHTTTC
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCc------------cccHHHHHHHHhCCc
Confidence 33456678888889988888999 76421 00123589999999975322110 001235667888999
Q ss_pred EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCCc-------
Q 002194 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL------- 783 (954)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~------- 783 (954)
.|+.++++ |.|.+. ........|+.++++++.++. .+|+++|+|+||||||.+|+.++.++|++
T Consensus 82 ~v~~~d~~---g~~~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 155 (283)
T 3bjr_A 82 QAFYLEYT---LLTDQQ---PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNV 155 (283)
T ss_dssp EEEEEECC---CTTTCS---SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTC
T ss_pred EEEEEecc---CCCccc---cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCC
Confidence 99996654 444321 011345678889999998763 47788999999999999999999999877
Q ss_pred ------ccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHH
Q 002194 784 ------FCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (954)
Q Consensus 784 ------~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~ 857 (954)
++++|+.+|..+.... +.............+...++...+.++.+|+|++||++|..+| +.++.+++++
T Consensus 156 ~~~~~~~~~~v~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p--~~~~~~~~~~ 230 (283)
T 3bjr_A 156 TPAMLKPNNVVLGYPVISPLLG---FPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVP--ATNTLAYATA 230 (283)
T ss_dssp CHHHHCCSSEEEESCCCCTTSB---C--------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSC--THHHHHHHHH
T ss_pred CcCCCCccEEEEcCCccccccc---cccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCC--hHHHHHHHHH
Confidence 8999999998763211 1000000000001123456777778889999999999999998 9999999999
Q ss_pred HHhCCCcEEEEEeCCCCCcCCCcc------------cHHHHHHHHHHHHHHh
Q 002194 858 LKGHGALCRLVILPFESHGYAARE------------SIMHVLWETDRWLQKY 897 (954)
Q Consensus 858 l~~~g~~~~~~~~~~~~H~~~~~~------------~~~~~~~~i~~fl~~~ 897 (954)
++..+.+++++++++++|.+.... ....+.+.+.+||+++
T Consensus 231 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 231 LATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999999999764221 1246778888998764
No 47
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.85 E-value=5.9e-21 Score=204.46 Aligned_cols=241 Identities=17% Similarity=0.182 Sum_probs=155.4
Q ss_pred eEEEEEE-cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 639 KELIKYQ-RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 639 ~~~~~~~-~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
.+.+++. ...|..+.+.+|+|++++. +++|+||++||+...... +... ......++++||+|+.
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~~---~~~p~vv~lHG~~~~~~~-----------~~~~-~~~~~~~~~~g~~vv~ 80 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAET---GKCPALYWLSGLTCTEQN-----------FISK-SGYHQSASEHGLVVIA 80 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGGT---SCEEEEEEECCTTCCSHH-----------HHHH-SCCHHHHHHHTCEEEE
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCCC---CCCCEEEEEcCCCCCccc-----------hhhc-chHHHHhhcCCeEEEE
Confidence 3445555 3478899999999987543 359999999997532211 1000 0124567889999999
Q ss_pred cCC--CCCCCCC----------Ccc---cchhhHH---HHHHH-HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH
Q 002194 718 GPT--TPIIGEG----------DEE---ANDRFVE---QLVAC-AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA 778 (954)
Q Consensus 718 ~~~--~~~~G~G----------~~~---~~~~~~~---~~~~D-~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~ 778 (954)
++. ++..+.| ... ....... ....+ +.++++++.+...+|++||+|+|+||||++|+.++.
T Consensus 81 ~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 160 (282)
T 3fcx_A 81 PDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICAL 160 (282)
T ss_dssp ECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eccccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHH
Confidence 775 3332211 111 1111111 11222 234555555555588899999999999999999999
Q ss_pred hCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCC---CCCEEEEEeCCCCCCCCchHH--HHH
Q 002194 779 HAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL---KKPILLVHGEEDNNSGTLTMQ--SDR 853 (954)
Q Consensus 779 ~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~---~~P~Lii~G~~D~~v~~~~~~--~~~ 853 (954)
++|++|+++|+++|+++....++...............+...+|...+.++ .+|+|++||+.|.++| ..+ +++
T Consensus 161 ~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~ 238 (282)
T 3fcx_A 161 KNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLL--DGQLLPDN 238 (282)
T ss_dssp TSTTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHH--TTSSCHHH
T ss_pred hCcccceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccc--cchhhHHH
Confidence 999999999999998763322111000000000111223344555444444 7899999999999986 444 668
Q ss_pred HHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
++++|+..|+++++++||+++|.+.. ....+.+.++|+.++|+
T Consensus 239 ~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 239 FIAACTEKKIPVVFRLQEDYDHSYYF---IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHHTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCceEEEECCCCCcCHHH---HHhhhHHHHHHHHHhhc
Confidence 99999999999999999999998732 34567778899998874
No 48
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.84 E-value=1.7e-20 Score=200.82 Aligned_cols=239 Identities=17% Similarity=0.181 Sum_probs=158.1
Q ss_pred ceEEEEEEc-CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 638 QKELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~~~-~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
..+.+++.+ ..|.++.+.+|+|+++++.+ ++|+||++||+...... |... ......+++.||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~P~vv~lHG~~~~~~~-----------~~~~-~~~~~~~~~~g~~vv 79 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESN--KVPVLYWLSGLTCTDEN-----------FMQK-AGAFKKAAELGIAIV 79 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTB--CEEEEEEECCTTCCSHH-----------HHHH-SCCHHHHHHHTCEEE
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCC--CcCEEEEeCCCCCChhh-----------hhcc-hhHHHHHhhCCeEEE
Confidence 345666765 47889999999999876443 59999999997432111 1000 012445667899999
Q ss_pred EcCCC--CCC---------CCCCcccc----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHH
Q 002194 717 GGPTT--PII---------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (954)
Q Consensus 717 ~~~~~--~~~---------G~G~~~~~----------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~ 775 (954)
.++.. +.. |.|.++.. ..+.....+++. .++.+...+ +++++|+|+||||++|+.
T Consensus 80 ~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~-~~~~~l~G~S~GG~~a~~ 155 (280)
T 3ls2_A 80 APDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELP---ALIEQHFPV-TSTKAISGHSMGGHGALM 155 (280)
T ss_dssp ECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHH---HHHHHHSSE-EEEEEEEEBTHHHHHHHH
T ss_pred EeCCcccccccccccccccccCCccccccccccccccccHHHHHHHHHH---HHHHhhCCC-CCCeEEEEECHHHHHHHH
Confidence 96642 110 22222110 022233334433 444444333 479999999999999999
Q ss_pred HHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCC----CCEEEEEeCCCCCCCCchHH-
Q 002194 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK----KPILLVHGEEDNNSGTLTMQ- 850 (954)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~----~P~Lii~G~~D~~v~~~~~~- 850 (954)
++.++|++|+++++++|+++....++...............+...+|...+.+++ +|+||+||+.|.+++ ...
T Consensus 156 ~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~ 233 (280)
T 3ls2_A 156 IALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLD--EQLK 233 (280)
T ss_dssp HHHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCC--CCCC
T ss_pred HHHhCchhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccC--Cchh
Confidence 9999999999999999987643221110000001111223344556666666664 599999999999997 644
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 851 SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 851 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+++++++|+..|+++++++||+++|.+.. ....+..+++|+.++|+
T Consensus 234 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 234 PQNLVAVAKQKDYPLTLEMQTGYDHSYFF---ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCceEEEeCCCCCchhh---HHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999998732 34567788999999874
No 49
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.84 E-value=8.1e-20 Score=185.90 Aligned_cols=203 Identities=19% Similarity=0.164 Sum_probs=150.4
Q ss_pred ceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 638 ~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
..+.+++++.+| +++++++.|++ +++.|+||++||+++..+.. .......++..|+++||.|+.
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~~----------~~~~~~~~~~~l~~~g~~v~~ 68 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHGGTM----------NNKVVTTLAKALDELGLKTVR 68 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGTCCT----------TCHHHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCCCcc----------CCchHHHHHHHHHHCCCEEEE
Confidence 356788999999 99999998864 22479999999953221110 001112456778889999999
Q ss_pred cCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCC
Q 002194 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (954)
.+..|+|.+...........+|+.++++++.++ .+.++++++|||+||.+++.++ .+| +++++|+++|..+.
T Consensus 69 ---~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~- 140 (208)
T 3trd_A 69 ---FNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY- 140 (208)
T ss_dssp ---ECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-
T ss_pred ---EecCCCCCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc-
Confidence 555677776554333456789999999999987 3457999999999999999999 666 89999999986520
Q ss_pred CCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 002194 798 LTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (954)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 877 (954)
.....+..+++|+|++||++|..+| ++.++++++++... ++++++++++|.+
T Consensus 141 -----------------------~~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~H~~ 192 (208)
T 3trd_A 141 -----------------------EGFASLTQMASPWLIVQGDQDEVVP--FEQVKAFVNQISSP---VEFVVMSGASHFF 192 (208)
T ss_dssp -----------------------GGGTTCCSCCSCEEEEEETTCSSSC--HHHHHHHHHHSSSC---CEEEEETTCCSSC
T ss_pred -----------------------CCchhhhhcCCCEEEEECCCCCCCC--HHHHHHHHHHccCc---eEEEEeCCCCCcc
Confidence 0112334558999999999999998 88888888876543 7999999999998
Q ss_pred CCcccHHHHHHHHHHHH
Q 002194 878 AARESIMHVLWETDRWL 894 (954)
Q Consensus 878 ~~~~~~~~~~~~i~~fl 894 (954)
... ..++.+.+.+||
T Consensus 193 ~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 193 HGR--LIELRELLVRNL 207 (208)
T ss_dssp TTC--HHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHh
Confidence 532 356666666665
No 50
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.84 E-value=1.2e-19 Score=186.55 Aligned_cols=208 Identities=19% Similarity=0.178 Sum_probs=160.0
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
+..+.++++. +|.++.++++.|++ +.|+||++||+.... ..+ .....+..|+++||.|+
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~~-----------~~~--~~~~~~~~l~~~G~~v~ 68 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSSR-----------YSP--RNRYVAEVLQQAGLATL 68 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCCT-----------TCH--HHHHHHHHHHHHTCEEE
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCCC-----------Ccc--chHHHHHHHHHCCCEEE
Confidence 5577888886 89999999999864 379999999963111 000 01235667888999999
Q ss_pred EcCCCCCCCCCCcccch------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEe
Q 002194 717 GGPTTPIIGEGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (954)
. .+..|+|.+.... .......+|+.++++++..++.+|+++++++|||+||.+++.++.++|++++++|++
T Consensus 69 ~---~d~~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~ 145 (223)
T 2o2g_A 69 L---IDLLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSR 145 (223)
T ss_dssp E---ECSSCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEE
T ss_pred E---EcCCCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEe
Confidence 9 4555666653321 334567899999999999998889999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEe
Q 002194 791 SGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVIL 870 (954)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~ 870 (954)
+|..+.. ...+.++++|+|++||++|..+| .. . .+.++..+.+++++++
T Consensus 146 ~~~~~~~-------------------------~~~~~~~~~P~l~i~g~~D~~~~--~~-~---~~~~~~~~~~~~~~~~ 194 (223)
T 2o2g_A 146 GGRPDLA-------------------------PSALPHVKAPTLLIVGGYDLPVI--AM-N---EDALEQLQTSKRLVII 194 (223)
T ss_dssp SCCGGGC-------------------------TTTGGGCCSCEEEEEETTCHHHH--HH-H---HHHHHHCCSSEEEEEE
T ss_pred CCCCCcC-------------------------HHHHhcCCCCEEEEEccccCCCC--HH-H---HHHHHhhCCCeEEEEe
Confidence 9853310 12345678999999999998875 33 2 3445555677999999
Q ss_pred CCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 871 PFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 871 ~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
++++|.+...+....+.+.+.+||+++|+
T Consensus 195 ~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 195 PRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp TTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred CCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 99999986556678889999999999873
No 51
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.84 E-value=1.6e-19 Score=189.75 Aligned_cols=227 Identities=19% Similarity=0.165 Sum_probs=159.5
Q ss_pred EEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCC
Q 002194 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (954)
Q Consensus 642 ~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~ 721 (954)
+++. .+|.+++++++.|++. +++.|+||++||.+.. .........+..|+++||.|++ +
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~----~~~~p~vvl~HG~~~~-------------~~~~~~~~~~~~l~~~g~~vi~---~ 62 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN----PEKCPLCIIIHGFTGH-------------SEERHIVAVQETLNEIGVATLR---A 62 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC----CSSEEEEEEECCTTCC-------------TTSHHHHHHHHHHHHTTCEEEE---E
T ss_pred eEEe-cCCcEEEEEEEccCCC----CCCCCEEEEEcCCCcc-------------cccccHHHHHHHHHHCCCEEEE---e
Confidence 4454 4889999999998641 1247999999996311 0001112356677889999999 6
Q ss_pred CCCCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC-
Q 002194 722 PIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL- 798 (954)
Q Consensus 722 ~~~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~- 798 (954)
+.+|+|.+.... .......+|+.++++++.++..+ ++++++||||||.+++.++.++|++++++|+++|......
T Consensus 63 D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (251)
T 2wtm_A 63 DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI 140 (251)
T ss_dssp CCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH
T ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH
Confidence 667888775432 23456788999999999766444 4899999999999999999999999999999998643100
Q ss_pred ----------C-CCCCccccchhh------hcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhC
Q 002194 799 ----------T-PFGFQNEDRTLW------EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGH 861 (954)
Q Consensus 799 ----------~-~~~~~~~~~~~~------~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~ 861 (954)
. ............ .........++...+.++++|+|++||++|..+| ++.++++.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~~~-- 216 (251)
T 2wtm_A 141 ARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVP--YEASVAFSKQYK-- 216 (251)
T ss_dssp HHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSC--HHHHHHHHHHSS--
T ss_pred HhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcC--hHHHHHHHHhCC--
Confidence 0 000000000000 0001111233444566789999999999999998 888888877652
Q ss_pred CCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 862 GALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 862 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+++++++|+++|.+ .+....+.+.+.+||++++.
T Consensus 217 --~~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 217 --NCKLVTIPGDTHCY--DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp --SEEEEEETTCCTTC--TTTHHHHHHHHHHHHHHHHC
T ss_pred --CcEEEEECCCCccc--chhHHHHHHHHHHHHHHhcc
Confidence 57999999999998 67788899999999998874
No 52
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.83 E-value=2.3e-20 Score=199.41 Aligned_cols=236 Identities=14% Similarity=0.129 Sum_probs=157.0
Q ss_pred ceEEEEEEc-CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 638 QKELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~~~-~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
..+.+++.+ ..|.++.+.+|+|+++. ++++|+||++||+...... |.... .....+.+.||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~~~-----------~~~~~-~~~~~~~~~g~~vv 78 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTHAN-----------VMEKG-EYRRMASELGLVVV 78 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCSHH-----------HHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCccc-----------hhhcc-cHHHHHhhCCeEEE
Confidence 345566654 47899999999998764 2359999999997422111 10000 02334556799999
Q ss_pred EcCCCCCCCCCCcccch-------------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHH
Q 002194 717 GGPTTPIIGEGDEEAND-------------------------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAF 771 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~~-------------------------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~ 771 (954)
.++.+ |+|.+.... .+.....+ ++++++.+...+|+++++|+|||+||+
T Consensus 79 ~~d~~---g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~i~l~G~S~GG~ 152 (278)
T 3e4d_A 79 CPDTS---PRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTE---ELPALIGQHFRADMSRQSIFGHSMGGH 152 (278)
T ss_dssp ECCSS---CCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHT---HHHHHHHHHSCEEEEEEEEEEETHHHH
T ss_pred ecCCc---ccCcccccccccccccCCccccccCCcCcccchhhHHHHHHH---HHHHHHHhhcCCCcCCeEEEEEChHHH
Confidence 95543 443321110 11122222 355666666567889999999999999
Q ss_pred HHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCC--CCEEEEEeCCCCCCCCchH
Q 002194 772 MTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTM 849 (954)
Q Consensus 772 ~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~ 849 (954)
+|+.++.++|++|+++|+++|+++....++...............+...+|...+.+++ +|+||+||+.|.+++ ..
T Consensus 153 ~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~ 230 (278)
T 3e4d_A 153 GAMTIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLE--KG 230 (278)
T ss_dssp HHHHHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHH--HH
T ss_pred HHHHHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccc--cc
Confidence 99999999999999999999987644333221100011111222334555655555543 599999999999976 42
Q ss_pred H-HHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 850 Q-SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 850 ~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
. ++++.++|+..|++++++++|+++|.+.. ....+.++++|+.++|+
T Consensus 231 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 231 LRPWLFEEAIKGTDIGLTLRMHDRYDHSYYF---ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp TCTHHHHHHHTTSSCEEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHcCCCceEEEeCCCCcCHHH---HHHHHHHHHHHHHHhcC
Confidence 2 78999999999999999999999998632 34567788899988863
No 53
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.83 E-value=2.3e-19 Score=184.15 Aligned_cols=211 Identities=13% Similarity=0.091 Sum_probs=158.0
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
...+.+++++.+| ++.++++.|++-.+ .+.|+||++||++...+.. ........+..|+++||.|+
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~~---~~~~~vv~~HG~~~~~~~~----------~~~~~~~~~~~l~~~g~~v~ 73 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPDVA---VQPVTAIVCHPLSTEGGSM----------HNKVVTMAARALRELGITVV 73 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTTSC---CCSEEEEEECSCTTTTCST----------TCHHHHHHHHHHHTTTCEEE
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCCCc---cccCEEEEECCCCCcCCcc----------cchHHHHHHHHHHHCCCeEE
Confidence 3468889999898 89999999975111 2379999999964221110 00111245667888999999
Q ss_pred EcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC
Q 002194 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (954)
.+ +.+|+|.+...........+|+.++++++.++. +.++++++|||+||.+++.++.++ +++++|+++|..+.
T Consensus 74 ~~---d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~ 146 (220)
T 2fuk_A 74 RF---NFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR 146 (220)
T ss_dssp EE---CCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT
T ss_pred EE---ecCCCCCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccc
Confidence 94 455777665443444567899999999999874 667999999999999999999887 79999999987543
Q ss_pred CCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCc
Q 002194 797 TLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHG 876 (954)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 876 (954)
.. +. .+. ...|+|++||++|..+| .+.++++++.++ .+++++++++++|.
T Consensus 147 ~~---------------------~~---~~~-~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~H~ 196 (220)
T 2fuk_A 147 WD---------------------FS---DVQ-PPAQWLVIQGDADEIVD--PQAVYDWLETLE---QQPTLVRMPDTSHF 196 (220)
T ss_dssp BC---------------------CT---TCC-CCSSEEEEEETTCSSSC--HHHHHHHHTTCS---SCCEEEEETTCCTT
T ss_pred hh---------------------hh---hcc-cCCcEEEEECCCCcccC--HHHHHHHHHHhC---cCCcEEEeCCCCce
Confidence 21 00 111 25799999999999998 888888887764 35799999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHhccc
Q 002194 877 YAARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
+.. ....+.+.+.+||.+++..
T Consensus 197 ~~~--~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 197 FHR--KLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp CTT--CHHHHHHHHHHHHGGGCSS
T ss_pred ehh--hHHHHHHHHHHHHHHHhhc
Confidence 854 3567888999999998853
No 54
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.2e-18 Score=186.88 Aligned_cols=259 Identities=12% Similarity=0.036 Sum_probs=180.8
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCC-CceeecccCCCcc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKARPLFQSPDIY 241 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~-g~~~~lt~~~~~~ 241 (954)
..|++|++.+ ++.+.+... ...+..++|||||++|++.. ...|+++|+++ ++..+++......
T Consensus 22 ~~i~~~d~~~----~~~~~~~~~--~~~v~~~~~spdg~~l~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (297)
T 2ojh_A 22 SSIEIFNIRT----RKMRVVWQT--PELFEAPNWSPDGKYLLLNS----------EGLLYRLSLAGDPSPEKVDTGFATI 85 (297)
T ss_dssp EEEEEEETTT----TEEEEEEEE--SSCCEEEEECTTSSEEEEEE----------TTEEEEEESSSCCSCEECCCTTCCC
T ss_pred eeEEEEeCCC----CceeeeccC--CcceEeeEECCCCCEEEEEc----------CCeEEEEeCCCCCCceEeccccccc
Confidence 5899999854 555555543 24688999999999999964 34899999999 8888776544211
Q ss_pred ccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe
Q 002194 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (954)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~ 321 (954)
.+..+.|+|||+.|++..... + +...||.+++
T Consensus 86 ---~~~~~~~spdg~~l~~~~~~~--------------------------------------~-------~~~~l~~~~~ 117 (297)
T 2ojh_A 86 ---CNNDHGISPDGALYAISDKVE--------------------------------------F-------GKSAIYLLPS 117 (297)
T ss_dssp ---BCSCCEECTTSSEEEEEECTT--------------------------------------T-------SSCEEEEEET
T ss_pred ---cccceEECCCCCEEEEEEeCC--------------------------------------C-------CcceEEEEEC
Confidence 156899999999999872100 0 2456999998
Q ss_pred -CCceeEcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccC
Q 002194 322 -DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (954)
Q Consensus 322 -~G~~~~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g 400 (954)
++..+.+........++|||||++|+|...... ...+|.+++++++.+.+.... ..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~-------------~~ 174 (297)
T 2ojh_A 118 TGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGE-------------GR 174 (297)
T ss_dssp TCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSS-------------SC
T ss_pred CCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCC-------------Cc
Confidence 777777776655777899999999998774432 114555556666666655432 23
Q ss_pred ccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccc--
Q 002194 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKT-- 478 (954)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~-- 478 (954)
+..+.|+|||+.+++.... +....||.++. .++..+.+......+..+.|+|||++|++.+....
T Consensus 175 ~~~~~~s~dg~~l~~~~~~----------~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSR----------TGQMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp EEEEEECTTSSEEEEEECT----------TSSCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred cccceECCCCCEEEEEecC----------CCCccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCC
Confidence 4578999999987776211 22457788774 56677777766666778999999999999876532
Q ss_pred -----cceEEEEEcCCCCCCCcEEEec--CCCCCccCCCCCCCeeeccCCcEEEEEEe
Q 002194 479 -----RRTRTWVISPGSKDVAPRILFD--RSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (954)
Q Consensus 479 -----~~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 529 (954)
....|++++++++ +...+.. .....+.. +.|+|||++|++...
T Consensus 242 ~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~~~------~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGG--NVETLFDLFGGQGTMNS------PNWSPDGDEFAYVRY 291 (297)
T ss_dssp SCCSSEEEEEEEEETTSC--SCEEEEEEEESTTTSCS------CCBCTTSSEEEEEEE
T ss_pred cccccCceEEEEEecCCC--CceeeeccCCCCccccc------ceECCCCCEEEEEEe
Confidence 2367999999886 3333332 22222222 789999999999874
No 55
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.83 E-value=2.1e-19 Score=200.38 Aligned_cols=236 Identities=17% Similarity=0.151 Sum_probs=166.6
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcE
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (954)
..+..+.+++++.||..+.++++.|++ .+ .++.|+||++||+.... . .+...+...|+++||.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~--~~~~p~vv~~hG~~~~~-----------~---~~~~~~~~~l~~~G~~ 126 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RG--GDRLPAIVIGGPFGAVK-----------E---QSSGLYAQTMAERGFV 126 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CC--SSCEEEEEEECCTTCCT-----------T---SHHHHHHHHHHHTTCE
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CC--CCCCCEEEEECCCCCcc-----------h---hhHHHHHHHHHHCCCE
Confidence 345678899999999999999999976 22 23589999999963110 0 1111356778899999
Q ss_pred EEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEec
Q 002194 715 ILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (954)
Q Consensus 715 V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (954)
|+.+ +.+|+|.+.... ......++|+.++++++.++..+|.++++++|||+||.+++.++.++| .++++|+++
T Consensus 127 v~~~---d~~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~ 202 (367)
T 2hdw_A 127 TLAF---DPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTST 202 (367)
T ss_dssp EEEE---CCTTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred EEEE---CCCCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEec
Confidence 9994 445666554321 225678899999999999998888899999999999999999999997 599999998
Q ss_pred cCCCC-----CCCC--------------------------CC----Cc---ccc--------------------------
Q 002194 792 GAYNR-----TLTP--------------------------FG----FQ---NED-------------------------- 807 (954)
Q Consensus 792 ~~~~~-----~~~~--------------------------~~----~~---~~~-------------------------- 807 (954)
|.... .... .. .. ...
T Consensus 203 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (367)
T 2hdw_A 203 MYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGN 282 (367)
T ss_dssp CCCHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTC
T ss_pred cccccHHHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccc
Confidence 64210 0000 00 00 000
Q ss_pred chhhhcHHHHHhcCcccccCCCC-CCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHH
Q 002194 808 RTLWEATSTYVEMSPFMSANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHV 886 (954)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~~~-~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~ 886 (954)
.........+...++...+.+++ +|+|++||++|. + ..++++++++ .+.+++++++|+++|..........+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~--~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~ 355 (367)
T 2hdw_A 283 AWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAH--S--RYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIP 355 (367)
T ss_dssp CCBTTTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--T--HHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSC
T ss_pred hhhhhhHHHhcCCChhHhHHhhcCCceEEEecCCCC--C--HHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHH
Confidence 00001123344556777888898 999999999998 6 7888888776 56789999999999974211111125
Q ss_pred HHHHHHHHHHhc
Q 002194 887 LWETDRWLQKYC 898 (954)
Q Consensus 887 ~~~i~~fl~~~l 898 (954)
.+.+.+||+++|
T Consensus 356 ~~~i~~fl~~~l 367 (367)
T 2hdw_A 356 FDRIAGFFDEHL 367 (367)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 788999999875
No 56
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=3.2e-19 Score=197.17 Aligned_cols=330 Identities=15% Similarity=0.165 Sum_probs=196.6
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCcee
Q 002194 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (954)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~ 180 (954)
.+++++..+.+..++| ||++|||+... .+...+ .....||++++.+ ++.+
T Consensus 7 ~~~~l~~~~~~~~~~~--dG~~i~~~~~~-------------------~~~~~~-----~~~~~l~~~d~~~----~~~~ 56 (347)
T 2gop_A 7 NEKTFAKFAYLSDPRT--KGELVAYVLTK-------------------ANLKDN-----KYENTIVIENLKN----NARR 56 (347)
T ss_dssp ---CCCCSCEEEEEEE--ETTEEEEEEEE-------------------EETTTT-----EEEEEEEEEETTT----CCEE
T ss_pred CcccceeeEEcccceE--CCcEEEEEEee-------------------cCcccC-----CccceEEEEeCCC----CceE
Confidence 3456677777788899 99999998763 211111 1225899999854 5556
Q ss_pred eeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEE
Q 002194 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVC 260 (954)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~ 260 (954)
+| ..+..|+|||||++|+|.+... +++..+||++++++|+.++++..+. +..+.|||||+.|++
T Consensus 57 ~l------~~~~~~~~SpDg~~la~~~~~~----~~~~~~l~~~~~~~g~~~~l~~~~~------~~~~~wspdg~~l~~ 120 (347)
T 2gop_A 57 FI------ENATMPRISPDGKKIAFMRANE----EKKVSEIWVADLETLSSKKILEAKN------IRSLEWNEDSRKLLI 120 (347)
T ss_dssp EE------ESCEEEEECTTSSEEEEEEEET----TTTEEEEEEEETTTTEEEEEEEESE------EEEEEECTTSSEEEE
T ss_pred Ec------ccCCCeEECCCCCEEEEEEecc----CCCcceEEEEECCCCceEEEEcCCC------ccceeECCCCCEEEE
Confidence 65 2367899999999999987532 2357789999999999988876543 458999999999999
Q ss_pred EecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCCccccccc
Q 002194 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLD 338 (954)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~~~~~~~~ 338 (954)
+........ .+ + ..+.+....++..+......+||++++ +|+. +.++.. .+..+.
T Consensus 121 ~~~~~~~~~-----~~----------------~-~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~ 177 (347)
T 2gop_A 121 VGFKRREDE-----DF----------------I-FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGI 177 (347)
T ss_dssp EEECCCC-------------------------------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEE
T ss_pred EEccCCCcC-----Cc----------------E-EEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-Cccccc
Confidence 853210000 00 0 001111122221111113467999999 7876 677653 667889
Q ss_pred cCCCCcEEEEEeecCCcccccccCCC-CcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002194 339 PSPDEKYILISSIHRPYSFIVPCGRF-PRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (954)
Q Consensus 339 ~SpDGk~l~~~s~~~~~~~~~~~~~~-~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~ 417 (954)
||||| |+|++....... ... ...|++++ +++.+.++.. . ....+||||+.|+|..
T Consensus 178 ~spdg--~~~~~~~~~~~~----~~~~~~~l~~~d--~~~~~~l~~~-~---------------~~~~~spdg~~l~~~~ 233 (347)
T 2gop_A 178 WHRDK--IVVNVPHREIIP----QYFKFWDIYIWE--DGKEEKMFEK-V---------------SFYAVDSDGERILLYG 233 (347)
T ss_dssp EETTE--EEEEEECCCSSC----CSSCCEEEEEEE--TTEEEEEEEE-E---------------SEEEEEECSSCEEEEE
T ss_pred CCCCe--EEEEEecccccc----cccccccEEEeC--CCceEEeccC-c---------------ceeeECCCCCEEEEEE
Confidence 99999 777664322100 001 23677887 6666666542 1 1223599999998874
Q ss_pred EeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-ccccCc-eeeccCCceEEEEEeccccceEEEEEcCCCCCCCc
Q 002194 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGG-ISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP 495 (954)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~-~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 495 (954)
.....+ ......||+++ +++.+.++.. +..+.. +.|+ || +++....++ ..+|| ++ ++ +.
T Consensus 234 ~~~~~~-----~~~~~~l~~~d-----~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~~~l~-~~-~g---~~ 294 (347)
T 2gop_A 234 KPEKKY-----MSEHNKLYIYD-----GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-SVNLY-IW-DG---EI 294 (347)
T ss_dssp CCSSSC-----CCSSCEEEEEC-----SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETT-EEEEE-EE-SS---SE
T ss_pred ccccCC-----ccccceEEEEC-----CCceEeccccCCcccCCccEEc-Cc--EEEEEecCC-cEEEE-Ec-CC---ce
Confidence 322110 01245788875 3455566543 455665 8999 88 666555444 47899 88 43 33
Q ss_pred EEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCc
Q 002194 496 RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDK 572 (954)
Q Consensus 496 ~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 572 (954)
..++.. ...+.. ++|+| . +++..... .....||.+| |+.++|+..+.
T Consensus 295 ~~~~~~-~~~v~~------~~~s~--~-~~~~~~~~-----------------~~~~~l~~~~---g~~~~lt~~n~ 341 (347)
T 2gop_A 295 KPIAKG-RHWIMG------FDVDE--I-VVYLKETA-----------------TRLRELFTWD---GEEKQLTDYND 341 (347)
T ss_dssp EEEECS-SSEEEE------EEESS--S-EEEEEECS-----------------SSCCEEEEES---SSEEECCCTTS
T ss_pred EEEecC-CCeEEe------eeeeC--c-EEEEEcCC-----------------CChHHheEeC---CcEEEeccccH
Confidence 444433 222222 67787 3 44443211 1223688888 67788887664
No 57
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.83 E-value=4.7e-20 Score=200.80 Aligned_cols=231 Identities=17% Similarity=0.172 Sum_probs=165.3
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH-HCCc
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGF 713 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~ 713 (954)
..+..+.+++++.+|..|.+++|.|.+ ++.|+||++|||.+..+. ...+ ...+..|+ +.||
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~g~--------~~~~----~~~~~~la~~~g~ 117 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFALGN--------LDTD----HRQCLELARRARC 117 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTSCC--------TTTT----HHHHHHHHHHHTS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCccCC--------hHHH----HHHHHHHHHHcCC
Confidence 345678899999999999999999974 248999999998543321 1111 23455666 4699
Q ss_pred EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhCCC----cccE
Q 002194 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCC 786 (954)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~a 786 (954)
.|+.++++...++ .+...++|+.++++|+.++ ..+|++||+|+|+|+||++|+.++.+.++ .+++
T Consensus 118 ~vv~~dyr~~p~~--------~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~ 189 (317)
T 3qh4_A 118 AVVSVDYRLAPEH--------PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIF 189 (317)
T ss_dssp EEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCE
T ss_pred EEEEecCCCCCCC--------CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeE
Confidence 9999777644332 2356788999999999886 45788999999999999999999987554 4999
Q ss_pred EEEeccCCCCCCCCCC--Cc-----c--ccchhhhcHHHHHh-------cCcccccCCCC--CCEEEEEeCCCCCCCCch
Q 002194 787 GIARSGAYNRTLTPFG--FQ-----N--EDRTLWEATSTYVE-------MSPFMSANKLK--KPILLVHGEEDNNSGTLT 848 (954)
Q Consensus 787 ~v~~~~~~~~~~~~~~--~~-----~--~~~~~~~~~~~~~~-------~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~ 848 (954)
+++++|+++....... +. . .....|. .|.. .+|.. ...+. .|+||+||+.|.++
T Consensus 190 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~-~~~l~~lpP~li~~G~~D~~~---- 261 (317)
T 3qh4_A 190 QLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWR---HYLAGQTPSPESVPGR-RGQLAGLPATLITCGEIDPFR---- 261 (317)
T ss_dssp EEEESCCCCSSCCHHHHHTTTCSSSCHHHHHHHHH---HHHTTCCCCTTTCGGG-CSCCTTCCCEEEEEEEESTTH----
T ss_pred EEEECceecCCCCcCHHHhcCCCCcCHHHHHHHHH---HhcCCCCCCcccCCCc-ccccCCCCceeEEecCcCCCc----
Confidence 9999998875411000 00 0 0001111 1111 12221 12222 49999999999874
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCCcCC----CcccHHHHHHHHHHHHHHhcc
Q 002194 849 MQSDRFFNALKGHGALCRLVILPFESHGYA----ARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 849 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~----~~~~~~~~~~~i~~fl~~~l~ 899 (954)
.++.++.++|+..|+++++++||+++|++. ..+...++++.+.+||++++.
T Consensus 262 ~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 262 DEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 578899999999999999999999999863 234567888999999999874
No 58
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.83 E-value=1.1e-19 Score=215.13 Aligned_cols=248 Identities=16% Similarity=0.216 Sum_probs=172.9
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHH---HHHHHCCc
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV---LLWLARGF 713 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~la~~G~ 713 (954)
+..+.++++..||.+|++++|+|++. +++|+||++||..... .........+...+. +.|+++||
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~-----~~~P~vl~~hgyg~~~-------~~~~~~~~~~~~~~~~~~~~la~~Gy 90 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA-----KNAPIVLTRTPYDASG-------RTERLASPHMKDLLSAGDDVFVEGGY 90 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHH-------HTCSSCCSSHHHHSCGGGHHHHHTTC
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC-----CCeeEEEEEcCCCCcc-------ccccccccccccccchhHHHHHhCCe
Confidence 45678899999999999999999752 3589999999742110 000000000000111 68899999
Q ss_pred EEEEcCCCCCCCCCCcccch-----hhHH---HHHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCCCcc
Q 002194 714 AILGGPTTPIIGEGDEEAND-----RFVE---QLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (954)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~-----~~~~---~~~~D~~~av~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~ 784 (954)
+|+..+++|..+.+...... .+.. ..++|+.++++||.++ ++.| .||+++|+||||++++++++..|+.+
T Consensus 91 ~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l 169 (615)
T 1mpx_A 91 IRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPAL 169 (615)
T ss_dssp EEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTE
T ss_pred EEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCce
Confidence 99997766554443322111 1122 6789999999999998 7776 59999999999999999999888999
Q ss_pred cEEEEeccCCCCCC-CCC---CC-cc-----------------------cc----------------------chhhh--
Q 002194 785 CCGIARSGAYNRTL-TPF---GF-QN-----------------------ED----------------------RTLWE-- 812 (954)
Q Consensus 785 ~a~v~~~~~~~~~~-~~~---~~-~~-----------------------~~----------------------~~~~~-- 812 (954)
+|+|+.+++.|... ..+ +. .. .. ...|+
T Consensus 170 ~a~v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (615)
T 1mpx_A 170 KVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKL 249 (615)
T ss_dssp EEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHH
T ss_pred EEEEecCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHH
Confidence 99999999988422 111 00 00 00 00011
Q ss_pred -----cHHHHHhcCcccccCC--CCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCC---cEEEEEeCCCCCcCCC---
Q 002194 813 -----ATSTYVEMSPFMSANK--LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGA---LCRLVILPFESHGYAA--- 879 (954)
Q Consensus 813 -----~~~~~~~~sp~~~~~~--~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~~~--- 879 (954)
..+.|.+.||..++++ |++|+|++||..|.+ + ..++.++|++|+..|+ ++++++.|. +|....
T Consensus 250 ~~~~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~--~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~ 325 (615)
T 1mpx_A 250 TEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-D--MWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDG 325 (615)
T ss_dssp HHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-C--SSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCC
T ss_pred HhCCCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-c--cccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccc
Confidence 0133456788889999 999999999999997 7 7899999999998864 489999998 686510
Q ss_pred ---------ccc-HHHHHHHHHHHHHHhcccC
Q 002194 880 ---------RES-IMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 880 ---------~~~-~~~~~~~i~~fl~~~l~~~ 901 (954)
.+. .....+.+++||++||+..
T Consensus 326 ~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 326 SALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp SEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 111 1233677899999999865
No 59
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.82 E-value=1.3e-19 Score=199.79 Aligned_cols=278 Identities=13% Similarity=0.048 Sum_probs=168.1
Q ss_pred CCEEEEEEecCCCCceEEEEECCCCceeEeecCCC-C-CCC---cCCCceEEEEEEcCCCeEEEEEEEcCCCC-CCCCCC
Q 002194 595 QLKILTSKESKTENTQYYIQSWPDKKSCQITDFPH-P-YPQ---LASLQKELIKYQRKDGVQLSATLYLPPGY-DPSKDG 668 (954)
Q Consensus 595 g~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~-~-~~~---~~~~~~~~~~~~~~~g~~l~~~l~~P~~~-~~~~~~ 668 (954)
...+++...+...+...+++. .+|++.++..... + .+. ...+..+.+.+.+ +..+.+.+|+|++. .+ .+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~--~~ 81 (338)
T 2o7r_A 7 ETTGSSDPNTNLLKYLPIVLN-PDRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYN--SA 81 (338)
T ss_dssp -----------CTTTCSCEEC-TTSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGS--SC
T ss_pred CCceeeccCcccccccceEEC-CCCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcC--CC
Confidence 345555555544454445555 3565555422111 1 111 1335667788875 45578888999753 11 23
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH-HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHH
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av 747 (954)
+.|+||++|||.+..+... . .....++..|+ ++||.|+.+++++. +.. .....++|+.+++
T Consensus 82 ~~p~vv~~HGgg~~~~~~~--------~--~~~~~~~~~la~~~g~~vv~~d~rg~---~~~-----~~~~~~~d~~~~~ 143 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAA--------S--TIFHDFCCEMAVHAGVVIASVDYRLA---PEH-----RLPAAYDDAMEAL 143 (338)
T ss_dssp CEEEEEEECCSTTTSCCTT--------B--HHHHHHHHHHHHHHTCEEEEEECCCT---TTT-----CTTHHHHHHHHHH
T ss_pred CceEEEEEcCCcCcCCCCC--------c--hhHHHHHHHHHHHCCcEEEEecCCCC---CCC-----CCchHHHHHHHHH
Confidence 5899999999865432211 0 00123456677 78999999766543 322 1245688999999
Q ss_pred HHHHHcC------CCCCCcEEEEeeChHHHHHHHHHHhCCC--------cccEEEEeccCCCCCCCCCC--------C-c
Q 002194 748 EEVVRRG------VAHPSKIAVGGHSYGAFMTANLLAHAPH--------LFCCGIARSGAYNRTLTPFG--------F-Q 804 (954)
Q Consensus 748 ~~l~~~~------~~d~~ri~l~G~S~GG~~a~~~a~~~p~--------~~~a~v~~~~~~~~~~~~~~--------~-~ 804 (954)
+|+.++. .+|+++++|+|||+||++|+.++.++|+ +++++|+++|.++....... + .
T Consensus 144 ~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (338)
T 2o7r_A 144 QWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLP 223 (338)
T ss_dssp HHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSC
T ss_pred HHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccC
Confidence 9998863 2677899999999999999999999887 89999999998764321000 0 0
Q ss_pred -cccchhhhcH------HHHHhcCccc---------ccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002194 805 -NEDRTLWEAT------STYVEMSPFM---------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (954)
Q Consensus 805 -~~~~~~~~~~------~~~~~~sp~~---------~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (954)
......|... ......+|+. .+.++.+|+||+||++|.+++ .+.+++++|+..+.+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~----~~~~~~~~l~~~~~~~~~~ 299 (338)
T 2o7r_A 224 TFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID----RQMELAERLEKKGVDVVAQ 299 (338)
T ss_dssp HHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH----HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH----HHHHHHHHHHHCCCcEEEE
Confidence 0000011100 0000011221 112245699999999998863 5678899999999999999
Q ss_pred EeCCCCCcCCC--cccHHHHHHHHHHHHHHhcc
Q 002194 869 ILPFESHGYAA--RESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 869 ~~~~~~H~~~~--~~~~~~~~~~i~~fl~~~l~ 899 (954)
++++++|.+.. .+....+.+.+.+||.+++.
T Consensus 300 ~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 300 FDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp EESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred EECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 99999998742 23346788899999988764
No 60
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=5.6e-18 Score=206.34 Aligned_cols=333 Identities=11% Similarity=0.065 Sum_probs=204.8
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCcee
Q 002194 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (954)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~ 180 (954)
++++++..+..+.+ +|||++++|...+ .+... ..||+.+.. + ++.+
T Consensus 66 ~~~~~~~~~~~~~p--~~dG~~~~~~~~~----------------------~~~~~------~~l~~~~~~--~--~~~~ 111 (710)
T 2xdw_A 66 RMTELYDYPKYSCH--FKKGKRYFYFYNT----------------------GLQNQ------RVLYVQDSL--E--GEAR 111 (710)
T ss_dssp HHHHHHCSCEECCC--EEETTEEEEEEEC----------------------SSCSS------CEEEEESST--T--SCCE
T ss_pred HHHHhhccccCCCC--EEECCEEEEEEEc----------------------CCceE------EEEEEEcCC--C--CCcE
Confidence 45666766565555 4999999999874 11111 256776542 2 4444
Q ss_pred eeec---CCCCC--cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCC
Q 002194 181 EIQG---FPDGA--KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNS 255 (954)
Q Consensus 181 ~lt~---~~~~~--~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG 255 (954)
.|.. +..+. .+..++|||||++|||..+.. ++...+||++|+++|+..+++..... +..++|||||
T Consensus 112 ~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~----G~~~~~i~v~d~~tg~~~~~~~~~~~-----~~~~~wspDg 182 (710)
T 2xdw_A 112 VFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS----GSDWVTIKFMKVDGAKELPDVLERVK-----FSCMAWTHDG 182 (710)
T ss_dssp EEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET----TCSCEEEEEEETTTTEEEEEEEEEEC-----SCCEEECTTS
T ss_pred EEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC----CCceEEEEEEECCCCCCCcccccCcc-----cceEEEEeCC
Confidence 4421 22222 467899999999999988643 44456999999999988775432221 4579999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce--eEcCCC-
Q 002194 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--KEIGPP- 331 (954)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~--~~l~~~- 331 (954)
+.|+|+......... .+.. ... ....+||++++ ++.. +.+...
T Consensus 183 ~~l~~~~~~~~~~~~------~~~~-------------------~~~--------~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 183 KGMFYNAYPQQDGKS------DGTE-------------------TST--------NLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp SEEEEEECCCCSSCC------SSSC-------------------CCC--------CCCCEEEEEETTSCGGGCEEEECCT
T ss_pred CEEEEEEECCccccc------cccc-------------------ccc--------CCCCEEEEEECCCCcccceEEeccC
Confidence 999998543221100 0000 000 02356999999 6642 333222
Q ss_pred ---ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC------c--eEEEeccCCCcccCCccccccccC
Q 002194 332 ---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG------I--FVRELCDLPLAEDIPIAFNSVRKG 400 (954)
Q Consensus 332 ---~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g------~--~~~~l~~~~~~~~~p~~~~~~~~g 400 (954)
....++.|||||++|++.+..... ...+++++|+++ + ..+.++.... .
T Consensus 230 ~~~~~~~~~~~SpDg~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-------------~ 288 (710)
T 2xdw_A 230 DEPKWMGGAELSDDGRYVLLSIREGCD--------PVNRLWYCDLQQESNGITGILKWVKLIDNFE-------------G 288 (710)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECSSS--------SCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-------------S
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEccCC--------CccEEEEEECcccccccCCccceEEeeCCCC-------------c
Confidence 335688999999999998854311 134899999986 4 4556554321 1
Q ss_pred ccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC---ceEEeeccc--ccCceeeccCCceEEEEEe
Q 002194 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEILHKLDL--RYGGISWCDDSLALVYESW 475 (954)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~~~l~~~~~--~~~~~~~spDg~~l~~~~~ 475 (954)
....|+|||+.++|..+.. .....|+++++ +++. .+.+..+.. .+..++|++++ .|++...
T Consensus 289 -~~~~~s~dg~~l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~ 354 (710)
T 2xdw_A 289 -EYDYVTNEGTVFTFKTNRH---------SPNYRLINIDF---TDPEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYL 354 (710)
T ss_dssp -CEEEEEEETTEEEEEECTT---------CTTCEEEEEET---TSCCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEE
T ss_pred -EEEEEeccCCEEEEEECCC---------CCCCEEEEEeC---CCCCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEE
Confidence 1235999999988873321 22558999996 4443 356654432 46678898554 5555555
Q ss_pred ccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEE
Q 002194 476 YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (954)
Q Consensus 476 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 555 (954)
.++ ..+||++++.++. ....+. .+...+.+ ++++|||+.++|..... . ....||
T Consensus 355 ~~g-~~~l~~~~~~~g~-~~~~l~-~~~~~v~~------~~~s~d~~~l~~~~ss~--------------~---~P~~i~ 408 (710)
T 2xdw_A 355 HDV-KNTLQLHDLATGA-LLKIFP-LEVGSVVG------YSGQKKDTEIFYQFTSF--------------L---SPGIIY 408 (710)
T ss_dssp ETT-EEEEEEEETTTCC-EEEEEC-CCSSEEEE------EECCTTCSEEEEEEECS--------------S---CCCEEE
T ss_pred ECC-EEEEEEEECCCCC-EEEecC-CCCceEEE------EecCCCCCEEEEEEeCC--------------C---CCCEEE
Confidence 443 3789999985541 223332 22222222 66889998888876321 1 234599
Q ss_pred EEECCCCC--eEEEecc
Q 002194 556 LFDINTGS--KERIWES 570 (954)
Q Consensus 556 ~~d~~~g~--~~~l~~~ 570 (954)
+||+++++ .+.+...
T Consensus 409 ~~d~~tg~~~~~~l~~~ 425 (710)
T 2xdw_A 409 HCDLTKEELEPRVFREV 425 (710)
T ss_dssp EEETTSSSCCCEEEEEC
T ss_pred EEECCCCccceEEeeec
Confidence 99999988 6655543
No 61
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.82 E-value=2.3e-19 Score=212.98 Aligned_cols=251 Identities=14% Similarity=0.146 Sum_probs=174.8
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHH-HHHHHCCcEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWLARGFAI 715 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~G~~V 715 (954)
+..+.+++++.||.+|.+++|+|++. +++|+||++||...... .........|... .... +.|+++||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-----~~~PvIl~~hpyg~~~~---~~~~~~~~~~~~~-~~~~~~~la~~GyaV 105 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTRTPYNAKGR---ANRVPNALTMREV-LPQGDDVFVEGGYIR 105 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHHH---TCSSTTCSSHHHH-SCGGGHHHHHTTCEE
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-----CCccEEEEECCCCCCcc---ccccccccccccc-ccchHHHHHhCCCEE
Confidence 45678899999999999999999762 35899999996321100 0000000000000 0012 6889999999
Q ss_pred EEcCCCCCCCCCCcccch-----hhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCCCcccE
Q 002194 716 LGGPTTPIIGEGDEEAND-----RFV---EQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~-----~~~---~~~~~D~~~av~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a 786 (954)
+..+++|..+.+..+... .+. ...++|+.++++||.++ +++| .||+++|+||||++++.++++.|+.|+|
T Consensus 106 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka 184 (652)
T 2b9v_A 106 VFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKV 184 (652)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEE
Confidence 997777665544432211 122 26789999999999999 8877 5999999999999999999988899999
Q ss_pred EEEeccCCCCCC-CCC---CCcccc----------------------ch------------------------hhhc---
Q 002194 787 GIARSGAYNRTL-TPF---GFQNED----------------------RT------------------------LWEA--- 813 (954)
Q Consensus 787 ~v~~~~~~~~~~-~~~---~~~~~~----------------------~~------------------------~~~~--- 813 (954)
+|+.+++.|+.. ..+ +..... .. .|..
T Consensus 185 ~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (652)
T 2b9v_A 185 AAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHA 264 (652)
T ss_dssp EEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHH
T ss_pred EEecccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHh
Confidence 999999988532 111 000000 00 0110
Q ss_pred ----HHHHHhcCcccccCC--CCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCC--CcEEEEEeCCCCCcCCC------
Q 002194 814 ----TSTYVEMSPFMSANK--LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG--ALCRLVILPFESHGYAA------ 879 (954)
Q Consensus 814 ----~~~~~~~sp~~~~~~--~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~------ 879 (954)
.+.|...||..++++ |++|+|++||..|.+ + ..++.++|++|+..+ +++++++.|. +|....
T Consensus 265 ~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~--~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~ 340 (652)
T 2b9v_A 265 HPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-D--MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTL 340 (652)
T ss_dssp CCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-C--SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEE
T ss_pred CCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-c--cccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccC
Confidence 122455688888999 999999999999997 6 678999999999998 8899999997 797511
Q ss_pred -------cccHHHHHHHHHHHHHHhcccC
Q 002194 880 -------RESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 880 -------~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
..+.....+.+++||++||+..
T Consensus 341 ~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 341 GPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp TTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CccccccccchhhhhhHHHHHHHHHhCCC
Confidence 1112334678899999999864
No 62
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.82 E-value=6.7e-18 Score=200.55 Aligned_cols=345 Identities=12% Similarity=0.133 Sum_probs=224.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCcccccc--------ccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceee
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELAR--------PEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~ 181 (954)
.+..++|||||++|+....++...+++... ....+..+.+.+++......+....|.+|+.. + ...+.
T Consensus 223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~--~--~~~~~ 298 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN--G--QLLQT 298 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--S--CEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC--C--cEEEE
Confidence 456789999999999887765544444332 23334556677766544434444678999973 2 33344
Q ss_pred eecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEE
Q 002194 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (954)
Q Consensus 182 lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~ 261 (954)
+.++ ...+...+|+|||+.|+.... ...|.+++.++.....+...... +..++|+|||+.|+..
T Consensus 299 ~~~h--~~~v~~~~~~~~~~~l~t~~~---------d~~i~~w~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~ 362 (577)
T 2ymu_A 299 LTGH--SSSVWGVAFSPDGQTIASASD---------DKTVKLWNRNGQHLQTLTGHSSS-----VWGVAFSPDGQTIASA 362 (577)
T ss_dssp ECCC--SSCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCSSC-----EEEEEECTTSSEEEEE
T ss_pred EecC--CCCeEEEEECCCCCEEEEEeC---------CCeEEEEeCCCCeeEEEeCCCCC-----EEEEEECCCCCEEEEE
Confidence 4432 246788899999999988652 34566667777766666543332 6688999999999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCC-ceeEcCCC-cccccccc
Q 002194 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIGPP-AVYTSLDP 339 (954)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l~~~-~~~~~~~~ 339 (954)
. ....|.+++.++ ....+... ..+..++|
T Consensus 363 ~-------------------------------------------------~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 363 S-------------------------------------------------DDKTVKLWNRNGQLLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp E-------------------------------------------------TTSEEEEEETTCCEEEEEECCSSCEEEEEE
T ss_pred e-------------------------------------------------CCCEEEEEcCCCCEEEEecCCCCCeEEEEE
Confidence 1 112355556644 33444444 67788999
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~ 419 (954)
||||++|+..+.+ +.+.+|+.++...+.+..+. ..+..++|+||++.++..
T Consensus 394 s~dg~~l~~~~~d-------------~~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~d~~~l~~~--- 444 (577)
T 2ymu_A 394 SPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVWGVAFSPDDQTIASA--- 444 (577)
T ss_dssp CTTSSCEEEEETT-------------SEEEEECTTCCEEEEEECCS-------------SCEEEEEECTTSSEEEEE---
T ss_pred CCCCCEEEEEeCC-------------CEEEEEeCCCCEEEEecCCC-------------CCeEEEEECCCCCEEEEE---
Confidence 9999999988743 37999998877666665432 334678999999977665
Q ss_pred ccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002194 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (954)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 499 (954)
+..+.|.+|+. ++.....+..+...+..++|+|||+.|+....+.. .+|| +.++ +.....
T Consensus 445 ----------~~d~~v~~w~~---~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~--i~iw--~~~~---~~~~~~ 504 (577)
T 2ymu_A 445 ----------SDDKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT--VKLW--NRNG---QLLQTL 504 (577)
T ss_dssp ----------ETTSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE--EEEE--ETTS---CEEEEE
T ss_pred ----------cCCCEEEEEEC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE--EEEE--cCCC---CEEEEE
Confidence 34557889985 66656667777778889999999999988765432 4444 5543 333333
Q ss_pred cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccccccee
Q 002194 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (954)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 579 (954)
..+...+.. ++|||||++|+.... ...|++||..+.....+....+. +
T Consensus 505 ~~h~~~v~~------l~~s~dg~~l~s~~~---------------------dg~v~lwd~~~~~~~~~~~h~~~-----v 552 (577)
T 2ymu_A 505 TGHSSSVRG------VAFSPDGQTIASASD---------------------DKTVKLWNRNGQLLQTLTGHSSS-----V 552 (577)
T ss_dssp ECCSSCEEE------EEECTTSSCEEEEET---------------------TSEEEEECTTSCEEEEEECCSSC-----E
T ss_pred eCCCCCEEE------EEEcCCCCEEEEEEC---------------------cCEEEEEeCCCCEEEEEcCCCCC-----E
Confidence 444444443 889999999887652 23589999765444444433321 2
Q ss_pred EEeccCCccccccccCCEEEEEEecCCCCceEEEEE
Q 002194 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQS 615 (954)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~ 615 (954)
.. .+|+|||++|+..... ..+++||
T Consensus 553 ~~-------~~fs~dg~~l~s~~~D----~~i~~Wd 577 (577)
T 2ymu_A 553 WG-------VAFSPDGQTIASASSD----KTVKLWN 577 (577)
T ss_dssp EE-------EEECTTSSCEEEEETT----SCEEEEC
T ss_pred EE-------EEEcCCCCEEEEEeCC----CEEEEeC
Confidence 22 4699999877643222 3366654
No 63
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.82 E-value=4e-19 Score=190.10 Aligned_cols=202 Identities=17% Similarity=0.134 Sum_probs=142.9
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAV 747 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av 747 (954)
.+.||++||... +...| ..++..|+++||.|++ .+.+|+|.+... .......++|+.+++
T Consensus 51 ~~~VlllHG~~~-----------s~~~~----~~la~~La~~Gy~Via---~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~ 112 (281)
T 4fbl_A 51 RIGVLVSHGFTG-----------SPQSM----RFLAEGFARAGYTVAT---PRLTGHGTTPAEMAASTASDWTADIVAAM 112 (281)
T ss_dssp SEEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CceEEEECCCCC-----------CHHHH----HHHHHHHHHCCCEEEE---ECCCCCCCCCccccCCCHHHHHHHHHHHH
Confidence 466889999521 11111 2467789999999999 677789988542 233456788999999
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC-----------CCC-------Cccc---
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-----------PFG-------FQNE--- 806 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-----------~~~-------~~~~--- 806 (954)
++|.+.. ++++|+||||||.+++.++.++|++++++|++++....... ... ...+
T Consensus 113 ~~l~~~~----~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (281)
T 4fbl_A 113 RWLEERC----DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVK 188 (281)
T ss_dssp HHHHHHC----SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCC
T ss_pred HHHHhCC----CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHH
Confidence 9997653 58999999999999999999999999999999986542110 000 0000
Q ss_pred -c---chhhhcHHHHHhc--CcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc
Q 002194 807 -D---RTLWEATSTYVEM--SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR 880 (954)
Q Consensus 807 -~---~~~~~~~~~~~~~--sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 880 (954)
. ...+.....+... .....+.++++|+||+||++|.+|| ++.++.+++++. +.+++++++|+++|.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~--~~~~~~l~~~l~--~~~~~l~~~~~~gH~~~~e 264 (281)
T 4fbl_A 189 ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVP--PHNGELIYNGIG--STEKELLWLENSYHVATLD 264 (281)
T ss_dssp CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSC--THHHHHHHHHCC--CSSEEEEEESSCCSCGGGS
T ss_pred HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcC--HHHHHHHHHhCC--CCCcEEEEECCCCCcCccc
Confidence 0 0000111111000 0113456789999999999999999 999999988775 3468999999999987544
Q ss_pred ccHHHHHHHHHHHHHHh
Q 002194 881 ESIMHVLWETDRWLQKY 897 (954)
Q Consensus 881 ~~~~~~~~~i~~fl~~~ 897 (954)
.+.+.+.+.|.+||++|
T Consensus 265 ~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 265 NDKELILERSLAFIRKH 281 (281)
T ss_dssp TTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 55778899999999986
No 64
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.82 E-value=3.6e-19 Score=193.55 Aligned_cols=233 Identities=17% Similarity=0.182 Sum_probs=162.5
Q ss_pred CCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC-CcE
Q 002194 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFA 714 (954)
Q Consensus 636 ~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~ 714 (954)
....+.+++++.+| ++.+++|.|++. .++.|+||++|||++..+. ...+ ...+..|+++ ||.
T Consensus 45 ~~~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~g~--------~~~~----~~~~~~la~~~g~~ 107 (310)
T 2hm7_A 45 VAEVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVVGD--------LETH----DPVCRVLAKDGRAV 107 (310)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTSCC--------TTTT----HHHHHHHHHHHTSE
T ss_pred cceEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCccccCC--------hhHh----HHHHHHHHHhcCCE
Confidence 45678889998887 999999999753 2348999999998543221 1122 2456677775 999
Q ss_pred EEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCC----cccEE
Q 002194 715 ILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCCG 787 (954)
Q Consensus 715 V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~a~ 787 (954)
|+.++++ |.|.. .+....+|+.++++|+.++. .+|+++|+|+|||+||.+|+.++.+.|+ .++++
T Consensus 108 v~~~d~r---g~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~ 179 (310)
T 2hm7_A 108 VFSVDYR---LAPEH-----KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQ 179 (310)
T ss_dssp EEEECCC---CTTTS-----CTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCE
T ss_pred EEEeCCC---CCCCC-----CCCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEE
Confidence 9996665 44332 12456789999999998874 3678899999999999999999988765 69999
Q ss_pred EEeccCCCCC--CCCCCCccc-cchhhh--c----HHHH---------HhcCcccc--cCCCCCCEEEEEeCCCCCCCCc
Q 002194 788 IARSGAYNRT--LTPFGFQNE-DRTLWE--A----TSTY---------VEMSPFMS--ANKLKKPILLVHGEEDNNSGTL 847 (954)
Q Consensus 788 v~~~~~~~~~--~~~~~~~~~-~~~~~~--~----~~~~---------~~~sp~~~--~~~~~~P~Lii~G~~D~~v~~~ 847 (954)
|+++|..+.. .....+... ....+. . ...| ...+|... +..+ .|+||+||++|..
T Consensus 180 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~---- 254 (310)
T 2hm7_A 180 LLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPL---- 254 (310)
T ss_dssp EEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTT----
T ss_pred EEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCc----
Confidence 9999987754 110000000 000000 0 0001 01233321 2222 3999999999986
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCC----cccHHHHHHHHHHHHHHhc
Q 002194 848 TMQSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 848 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l 898 (954)
..++..++++|+..|+++++++|++++|.+.. .+....+.+.+.+||++++
T Consensus 255 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 255 RDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 46788999999999999999999999998743 2345678899999999886
No 65
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.82 E-value=9.8e-19 Score=190.74 Aligned_cols=234 Identities=18% Similarity=0.130 Sum_probs=163.1
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCc
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGF 713 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~ 713 (954)
.....+.+++++.+| .+.+++|.|++ .++.|+||++|||.+..+. ...| ......|+. .||
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~g~--------~~~~----~~~~~~La~~~g~ 122 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVLGD--------IESY----DPLCRAITNSCQC 122 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTSCC--------TTTT----HHHHHHHHHHHTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCccccCC--------hHHH----HHHHHHHHHhcCC
Confidence 345678899988777 89999999975 2347999999998543221 1122 235566775 499
Q ss_pred EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCC-C-CCCcEEEEeeChHHHHHHHHHHhCCCcc---cEEE
Q 002194 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGV-A-HPSKIAVGGHSYGAFMTANLLAHAPHLF---CCGI 788 (954)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~-~-d~~ri~l~G~S~GG~~a~~~a~~~p~~~---~a~v 788 (954)
.|+.++++ |.|.+. ++..++|+.++++|+.++.. . |+++|+|+|+|+||++|+.++.+.|++. +++|
T Consensus 123 ~Vv~~Dyr---g~~~~~-----~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~v 194 (323)
T 3ain_A 123 VTISVDYR---LAPENK-----FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQV 194 (323)
T ss_dssp EEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEecCC---CCCCCC-----CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEE
Confidence 99996554 444432 24567899999999988631 1 7899999999999999999999887766 8999
Q ss_pred EeccCCCCCCCCCCCc--------ccc--chhhhc----H--HHHHhcCcccc-cCCCCCCEEEEEeCCCCCCCCchHHH
Q 002194 789 ARSGAYNRTLTPFGFQ--------NED--RTLWEA----T--STYVEMSPFMS-ANKLKKPILLVHGEEDNNSGTLTMQS 851 (954)
Q Consensus 789 ~~~~~~~~~~~~~~~~--------~~~--~~~~~~----~--~~~~~~sp~~~-~~~~~~P~Lii~G~~D~~v~~~~~~~ 851 (954)
+++|..+.......+. ... ...|.. . ......+|+.. +..+ .|+||++|+.|.. ..++
T Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l----~~~~ 269 (323)
T 3ain_A 195 LIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPL----RDQG 269 (323)
T ss_dssp EESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTT----HHHH
T ss_pred EEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCcc----HHHH
Confidence 9999876432210000 000 000000 0 00011234332 1222 4999999999986 4678
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCC----cccHHHHHHHHHHHHHHhcc
Q 002194 852 DRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (954)
..++++|+..|+++++++|++++|.+.. .+....+.+.+.+||++++.
T Consensus 270 ~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 270 EAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999753 23457888999999999874
No 66
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=2.2e-18 Score=208.45 Aligned_cols=317 Identities=14% Similarity=0.090 Sum_probs=201.2
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCC
Q 002194 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (954)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~ 188 (954)
..+..++||+| .++|+..+ +..+.. ..||++ . .+ +..++|+...
T Consensus 24 ~~~~~~~~s~~--~~~~~~~~---------------------~~~~~~------~~l~~~-~--~~--~~~~~l~~~~-- 67 (662)
T 3azo_A 24 GRPACVGAVGD--EVWWVAPR---------------------PAEAGR------ATLVRR-R--AD--GAEESALPAP-- 67 (662)
T ss_dssp SCCEEEEEETT--EEEEEEEE---------------------TTTTTE------EEEEEE-C--TT--SCEEESSCTT--
T ss_pred CccceeEEcCC--eEEEEecC---------------------cccCCc------EEEEEE-C--CC--CCcceeCCCC--
Confidence 46778889865 68887652 111111 255654 2 22 5566775432
Q ss_pred Cccc---------ceeec--CCCCe-EEEEEeeccccCCCCceEEEEEECC--C-CceeecccCCCccccccccceeEec
Q 002194 189 AKLN---------FVTWS--QDGKH-LAFSIRIDAEDSSSSKLRVWVADVD--T-GKARPLFQSPDIYLNAIFDNFVWVN 253 (954)
Q Consensus 189 ~~~~---------~~~wS--PDG~~-iaf~~~~~~~~~~~~~~~l~~~d~~--~-g~~~~lt~~~~~~~~~~~~~~~wsp 253 (954)
..+. .+.|| |||++ |+|+.. ...+||+++++ + ++.++++..+.......+..++|||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~--------~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 68 WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF--------GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT--------TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET
T ss_pred ccccccccccCCccceeeeecCCCeEEEEEEC--------CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC
Confidence 2333 56676 99999 999753 25789999998 6 8888998743110011156899999
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C------Ccee
Q 002194 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D------GTVK 326 (954)
Q Consensus 254 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~------G~~~ 326 (954)
||+.|+++....... .+ ..+..+||++++ + |+.+
T Consensus 140 Dg~~l~~~~~~~~~~--------------------------------~~-------~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 140 ERGEVWCMAEEFTGE--------------------------------GP-------SDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TTTEEEEEEEEECSS--------------------------------ST-------TCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCCEEEEEEecccCC--------------------------------CC-------CCceeEEEEEECCCCccccCCcee
Confidence 999999883211000 00 003467999999 6 7888
Q ss_pred EcC-CC-ccccccccCCCCcEEEEEeecCCcccccccCCC-CcceEEEecc-Cc---eEEEeccCCCcccCCcccccccc
Q 002194 327 EIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRF-PRQVGVWTTD-GI---FVRELCDLPLAEDIPIAFNSVRK 399 (954)
Q Consensus 327 ~l~-~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~-~~~l~l~d~~-g~---~~~~l~~~~~~~~~p~~~~~~~~ 399 (954)
+++ .. ..+..++|||||++|+|.+...+.. .+ ..+|++||++ ++ +.+.++... ..
T Consensus 181 ~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~------~~~~~~i~~~d~~~~g~~~~~~~l~~~~------------~~ 242 (662)
T 3azo_A 181 ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM------PWEGTELKTARVTEDGRFADTRTLLGGP------------EE 242 (662)
T ss_dssp ESSCSCSSEECCCEECTTSSEEEEEEECTTCC------TTTCEEEEEEEECTTSCEEEEEEEEEET------------TB
T ss_pred EEEecCCCcccCceECCCCCEEEEEECCCCCC------CCCCcEEEEEEECCCCcccccEEeCCCC------------Cc
Confidence 888 65 6778899999999999988554210 11 2489999998 45 556665421 12
Q ss_pred CccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeeccccc---------CceeeccCCceE
Q 002194 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRY---------GGISWCDDSLAL 470 (954)
Q Consensus 400 g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~---------~~~~~spDg~~l 470 (954)
.+..++|||||+ ++|..+. ++...||++++ ++++.++++...... ..++|+|||+.+
T Consensus 243 ~~~~~~~spdg~-l~~~~~~----------~~~~~l~~~~~---~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 243 AIAQAEWAPDGS-LIVATDR----------TGWWNLHRVDP---ATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp CEEEEEECTTSC-EEEEECT----------TSSCEEEEECT---TTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred eEcceEECCCCe-EEEEECC----------CCCeEEEEEEC---CCCceeecccccccccCccccccCceEeEeCCCEEE
Confidence 345789999999 6665221 12347999985 567777776554443 345666777755
Q ss_pred EEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeee-ccCCcEEEEEEeeccCCCcEEEEecCCCCCCC
Q 002194 471 VYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEG 549 (954)
Q Consensus 471 ~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (954)
+.. .. + ..+||.++++++ +.+.++.. ...+ ..+ ++||+.++|..... .
T Consensus 309 ~~~-~~-~-~~~l~~~d~~~~--~~~~l~~~-~~~~--------~~~~s~~~~~~~~~~~~~-----------------~ 357 (662)
T 3azo_A 309 VVH-GK-G-AAVLGILDPESG--ELVDAAGP-WTEW--------AATLTVSGTRAVGVAASP-----------------R 357 (662)
T ss_dssp EEE-BS-S-SCEEEEEETTTT--EEEECCSS-CCEE--------EEEEEEETTEEEEEEEET-----------------T
T ss_pred EEE-Ec-C-ccEEEEEECCCC--cEEEecCC-CCeE--------EEEEecCCCEEEEEEcCC-----------------C
Confidence 444 44 3 478999999875 33444322 1111 123 78888887776322 1
Q ss_pred CCCeEEEEECCCCCeEEEeccC
Q 002194 550 NIPFLDLFDINTGSKERIWESD 571 (954)
Q Consensus 550 ~~~~l~~~d~~~g~~~~l~~~~ 571 (954)
....||++|+++++.++|+...
T Consensus 358 ~~~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 358 TAYEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp EEEEEEEEETTTCCEEEEESCC
T ss_pred CCCEEEEEECCCCceEEeecCC
Confidence 2346999999999999887655
No 67
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.81 E-value=1.2e-18 Score=192.80 Aligned_cols=238 Identities=16% Similarity=0.123 Sum_probs=161.2
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCCC------------CCCCCccEEEEECCCCCcCcccCccccCCCCCCCCccc
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDP------------SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGS 702 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~------------~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~ 702 (954)
..+..+.+.+.. +..+.+.+|+|++... ...++.|+||++|||.+..+... . ....
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~--------~--~~~~ 135 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSAN--------S--AIYD 135 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTT--------B--HHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCc--------c--hhHH
Confidence 345566777765 4557888999976420 11245899999999864332111 1 0012
Q ss_pred HHHHHHH-HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEeeChHHHHHHHH
Q 002194 703 TSVLLWL-ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG----VAHPS-KIAVGGHSYGAFMTANL 776 (954)
Q Consensus 703 ~~~~~la-~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~----~~d~~-ri~l~G~S~GG~~a~~~ 776 (954)
.++..|+ ++||.|+..++++. +.. .....++|+.++++|+.++. .+|++ +|+|+|||+||++|+.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~rg~---~~~-----~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~ 207 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYRRA---PEN-----PYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCCCT---TTS-----CTTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecCCCC---CCC-----CCchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHH
Confidence 3556777 78999999766543 222 22456789999999999864 47899 99999999999999999
Q ss_pred HHhCCC---cccEEEEeccCCCCCCCCCC--------Cccc--cchhhhcH------HHHHhcCcc----cccCCCCC-C
Q 002194 777 LAHAPH---LFCCGIARSGAYNRTLTPFG--------FQNE--DRTLWEAT------STYVEMSPF----MSANKLKK-P 832 (954)
Q Consensus 777 a~~~p~---~~~a~v~~~~~~~~~~~~~~--------~~~~--~~~~~~~~------~~~~~~sp~----~~~~~~~~-P 832 (954)
+.+.|+ +++++|+++|.++....... +... ....|... ......+|+ ..+.++++ |
T Consensus 208 a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 208 ALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp HHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred HHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 999887 89999999998763321100 0000 00001000 000011222 23444555 9
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCC---cccHHHHHHHHHHHHHH
Q 002194 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA---RESIMHVLWETDRWLQK 896 (954)
Q Consensus 833 ~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~ 896 (954)
+||+||++|.++ .++.+++++|+..+.+++++++++++|.+.. .+....+.+.+.+||++
T Consensus 288 ~Lii~G~~D~~~----~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 288 SLVVVAGLDLIR----DWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEEETTSTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCcch----HHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 999999999874 4678899999999999999999999998854 25567788899999875
No 68
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.81 E-value=6e-19 Score=192.97 Aligned_cols=237 Identities=21% Similarity=0.188 Sum_probs=164.4
Q ss_pred CCCceEEEEEEcCCCe-EEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CC
Q 002194 635 ASLQKELIKYQRKDGV-QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RG 712 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~-~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G 712 (954)
..+..+.+++++.+|. .+.+++|.|++. .++.|+||++|||.+..+.. ..+ ......|++ .|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~~~g~~--------~~~----~~~~~~la~~~G 110 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIGTA--------ESS----DPFCVEVARELG 110 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSCCG--------GGG----HHHHHHHHHHHC
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCccccCCh--------hhh----HHHHHHHHHhcC
Confidence 3456788999998887 899999999741 23589999999986432211 111 234556776 59
Q ss_pred cEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhCCC----ccc
Q 002194 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPH----LFC 785 (954)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~ 785 (954)
|.|+.+++ +|+|.+. ++...+|+.++++|+.++ ..+|+++|+|+|+|+||++|+.++.+.++ .++
T Consensus 111 ~~Vv~~d~---rg~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 111 FAVANVEY---RLAPETT-----FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CEEEEECC---CCTTTSC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred cEEEEecC---CCCCCCC-----CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 99999555 4555442 234578899999999874 24788899999999999999999988654 499
Q ss_pred EEEEeccCCCCCCCCCCCcc-ccchhhhc------HHHHH--------------hcCcccccCCCC--CCEEEEEeCCCC
Q 002194 786 CGIARSGAYNRTLTPFGFQN-EDRTLWEA------TSTYV--------------EMSPFMSANKLK--KPILLVHGEEDN 842 (954)
Q Consensus 786 a~v~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~--------------~~sp~~~~~~~~--~P~Lii~G~~D~ 842 (954)
++|+++|..+.......+.. .....|.. ...|. ..+|... ..+. +|+||+||++|.
T Consensus 183 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~ 261 (323)
T 1lzl_A 183 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDP 261 (323)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCT
T ss_pred EEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCC
Confidence 99999998775432100000 00000000 01111 1123221 1232 699999999998
Q ss_pred CCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc---ccHHHHHHHHHHHHHHhccc
Q 002194 843 NSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR---ESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 843 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~~l~~ 900 (954)
. ..++.+++++|+..|+++++++||+++|.+... +....+++.+.+||++++..
T Consensus 262 ~----~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 262 L----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp T----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred c----hHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 6 467889999999999999999999999986422 23567889999999999853
No 69
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.81 E-value=2.8e-19 Score=194.67 Aligned_cols=233 Identities=18% Similarity=0.122 Sum_probs=161.1
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (954)
...+.+++++.+| .+.+++|.|++ ..+.|+||++|||++..+. ...+ ...+..|++ .||.|
T Consensus 49 ~~~~~~~i~~~~g-~~~~~~~~P~~-----~~~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~v 110 (313)
T 2wir_A 49 HRVEDITIPGRGG-PIRARVYRPRD-----GERLPAVVYYHGGGFVLGS--------VETH----DHVCRRLANLSGAVV 110 (313)
T ss_dssp SEEEEEEEEETTE-EEEEEEEECSC-----CSSEEEEEEECCSTTTSCC--------TGGG----HHHHHHHHHHHCCEE
T ss_pred ceEEEEEeeCCCC-cEEEEEEecCC-----CCCccEEEEECCCcccCCC--------hHHH----HHHHHHHHHHcCCEE
Confidence 3577889998887 99999999975 2247999999998543221 1111 245666777 59999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCCc----ccEEE
Q 002194 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGI 788 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v 788 (954)
+.+++ +|+|.+.. +....|+.++++|+.++. .+|+++|+|+|+|+||++++.++.+.|++ ++++|
T Consensus 111 ~~~d~---rg~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 182 (313)
T 2wir_A 111 VSVDY---RLAPEHKF-----PAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQV 182 (313)
T ss_dssp EEEEC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEeec---CCCCCCCC-----CchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEE
Confidence 99555 45555422 345688889999998752 36788999999999999999999988766 99999
Q ss_pred EeccCCC-CCCCCCCCccc---cchhhh--c----HHHH---------HhcCcccccCCCCCCEEEEEeCCCCCCCCchH
Q 002194 789 ARSGAYN-RTLTPFGFQNE---DRTLWE--A----TSTY---------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTM 849 (954)
Q Consensus 789 ~~~~~~~-~~~~~~~~~~~---~~~~~~--~----~~~~---------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~ 849 (954)
+++|.++ .......+... ....+. . ...| ...+|+...-+...|+||+||++|..+ .
T Consensus 183 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~----~ 258 (313)
T 2wir_A 183 LIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLR----D 258 (313)
T ss_dssp EESCCCCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTH----H
T ss_pred EEcCccCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcCh----H
Confidence 9999877 32211000000 000000 0 0001 112444211112259999999999874 5
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCcCCC----cccHHHHHHHHHHHHHHhcc
Q 002194 850 QSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 850 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (954)
++..++++|+..|+++++++|++++|.+.. .+...++++.+.+||+++++
T Consensus 259 ~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 259 EGELYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999998752 23456788899999988753
No 70
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=7.9e-18 Score=204.38 Aligned_cols=330 Identities=13% Similarity=0.051 Sum_probs=203.8
Q ss_pred hhHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce
Q 002194 100 PEIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE 179 (954)
Q Consensus 100 ~~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~ 179 (954)
.++.+++.....+ ..+|||++++|...+ .+... ..||+.+.. + +..
T Consensus 61 ~~~~~~~~~~~~~--~p~~dG~~~~~~~~~----------------------~~~~~------~~l~~~~~~--~--~~~ 106 (695)
T 2bkl_A 61 ARFKELFYTDSVS--TPSRRNGRFFYVRTH----------------------KDKEK------AILYWRQGE--S--GQE 106 (695)
T ss_dssp HHHHHHHSCCEEC--CCEEETTEEEEEEEC----------------------TTCSS------CEEEEEEST--T--SCC
T ss_pred HHHHHhhccccCC--CCEEECCEEEEEEEc----------------------CCCeE------EEEEEEcCC--C--CCc
Confidence 3455666654433 445999999999875 11111 367887753 3 555
Q ss_pred eeeecCC---CC--CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecC
Q 002194 180 IEIQGFP---DG--AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN 254 (954)
Q Consensus 180 ~~lt~~~---~~--~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD 254 (954)
++|+... .+ ..+..++|||||++|||+.+.. +++..+|+++|+++|+..+........ ...++||||
T Consensus 107 ~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~----G~~~~~i~v~dl~tg~~~~~~~~~~~~----~~~~~wspD 178 (695)
T 2bkl_A 107 KVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN----AADEAVLHVIDVDSGEWSKVDVIEGGK----YATPKWTPD 178 (695)
T ss_dssp EEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET----TCSCCEEEEEETTTCCBCSSCCBSCCT----TCCCEECTT
T ss_pred EEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC----CCceEEEEEEECCCCCCcCCcccCccc----ccceEEecC
Confidence 6665311 11 1577899999999999998643 555689999999999865121112111 258999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--eeEcCCC
Q 002194 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP 331 (954)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--~~~l~~~ 331 (954)
|+.|+|+.....+. +.. . + .....+||++++ ++. .+.+...
T Consensus 179 g~~l~~~~~d~~~~---------~~~-------------------~---~-----~~~~~~v~~~~l~t~~~~~~lv~~~ 222 (695)
T 2bkl_A 179 SKGFYYEWLPTDPS---------IKV-------------------D---E-----RPGYTTIRYHTLGTEPSKDTVVHER 222 (695)
T ss_dssp SSEEEEEECCCCTT---------SCG-------------------G---G-----GGGGCEEEEEETTSCGGGCEEEECC
T ss_pred CCEEEEEEecCCCC---------Ccc-------------------c---c-----CCCCCEEEEEECCCCchhceEEEec
Confidence 99999984322111 000 0 0 003457999999 664 2344332
Q ss_pred ----ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeec
Q 002194 332 ----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (954)
Q Consensus 332 ----~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~ws 407 (954)
..+.++.|||||++|++.+..... ..++++++..+++.+.+..... +...+.|
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~---------~~~l~~~~~~~~~~~~l~~~~~-------------~~~~~~~- 279 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILRGWS---------ENDVYWKRPGEKDFRLLVKGVG-------------AKYEVHA- 279 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEETTT---------EEEEEEECTTCSSCEEEEECSS-------------CCEEEEE-
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeCCCC---------ceEEEEEcCCCCceEEeecCCC-------------ceEEEEe-
Confidence 356689999999999998865411 2378888876666777665321 2234456
Q ss_pred cCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc---eEEeec--ccccCceeeccCCceEEEEEeccccceE
Q 002194 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKL--DLRYGGISWCDDSLALVYESWYKTRRTR 482 (954)
Q Consensus 408 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~~ 482 (954)
+||+ +++..+.. .....|+++++ ++++. +.+... ...+..++|+ + ..|++....++ ..+
T Consensus 280 ~~g~-l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~l~~~~~~-~-~~lv~~~~~dg-~~~ 343 (695)
T 2bkl_A 280 WKDR-FYVLTDEG---------APRQRVFEVDP---AKPARASWKEIVPEDSSASLLSVSIV-G-GHLSLEYLKDA-TSE 343 (695)
T ss_dssp ETTE-EEEEECTT---------CTTCEEEEEBT---TBCSGGGCEEEECCCSSCEEEEEEEE-T-TEEEEEEEETT-EEE
T ss_pred cCCc-EEEEECCC---------CCCCEEEEEeC---CCCCccCCeEEecCCCCCeEEEEEEE-C-CEEEEEEEECC-EEE
Confidence 7888 66653211 23568999986 44442 556543 3446677887 4 45666555544 378
Q ss_pred EEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002194 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (954)
Q Consensus 483 l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 562 (954)
||+++++++ ....+.-.....+.+ ++++|||+.++|..... .....||+||++++
T Consensus 344 l~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~-----------------~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 344 VRVATLKGK--PVRTVQLPGVGAASN------LMGLEDLDDAYYVFTSF-----------------TTPRQIYKTSVSTG 398 (695)
T ss_dssp EEEEETTCC--EEEECCCSSSSEECC------CBSCTTCSEEEEEEEET-----------------TEEEEEEEEETTTC
T ss_pred EEEEeCCCC--eeEEecCCCCeEEEE------eecCCCCCEEEEEEcCC-----------------CCCCEEEEEECCCC
Confidence 999998653 222232111122222 66899999998887432 12345999999999
Q ss_pred CeEEEeccC
Q 002194 563 SKERIWESD 571 (954)
Q Consensus 563 ~~~~l~~~~ 571 (954)
+.+.+....
T Consensus 399 ~~~~l~~~~ 407 (695)
T 2bkl_A 399 KSELWAKVD 407 (695)
T ss_dssp CEEEEEECC
T ss_pred cEEEEecCC
Confidence 988776544
No 71
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.80 E-value=8.2e-19 Score=191.59 Aligned_cols=230 Identities=16% Similarity=0.121 Sum_probs=153.3
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (954)
...+.+++ +|..+ |+|++- .. ..|+||++|||.+..+.. .. ....+..|++ .||.|
T Consensus 58 ~~~~~~~~---~g~~~----~~p~~~--~~--~~~~vv~~HGgg~~~g~~--------~~----~~~~~~~la~~~g~~v 114 (322)
T 3k6k_A 58 VELTLTDL---GGVPC----IRQATD--GA--GAAHILYFHGGGYISGSP--------ST----HLVLTTQLAKQSSATL 114 (322)
T ss_dssp CEEEEEEE---TTEEE----EEEECT--TC--CSCEEEEECCSTTTSCCH--------HH----HHHHHHHHHHHHTCEE
T ss_pred ceEEEEEE---CCEeE----EecCCC--CC--CCeEEEEEcCCcccCCCh--------HH----HHHHHHHHHHhcCCEE
Confidence 33444444 67555 466541 11 245599999985432211 01 1134455665 49999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc----ccEEEEec
Q 002194 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARS 791 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~ 791 (954)
+.++++.. +.. .++..++|+.++++||.++ .+|+++|+|+|+|+||++|+.++.+.++. ++++|+++
T Consensus 115 ~~~dyr~~---~~~-----~~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~ 185 (322)
T 3k6k_A 115 WSLDYRLA---PEN-----PFPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLS 185 (322)
T ss_dssp EEECCCCT---TTS-----CTTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEES
T ss_pred EEeeCCCC---CCC-----CCchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEec
Confidence 99777543 222 2345678999999999988 46889999999999999999999887654 99999999
Q ss_pred cCCCCCCCCCCCccc-cchhh-------hcHHHHH--------hcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHH
Q 002194 792 GAYNRTLTPFGFQNE-DRTLW-------EATSTYV--------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (954)
Q Consensus 792 ~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~--------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~ 855 (954)
|+++.......+... ....+ .....|. ..+|+....+...|+||+||++|.+ ..++.+++
T Consensus 186 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~----~~~~~~~~ 261 (322)
T 3k6k_A 186 PFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL----LSDSTTLA 261 (322)
T ss_dssp CCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT----HHHHHHHH
T ss_pred CCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc----HHHHHHHH
Confidence 988754322111000 00000 0001111 1244443333447999999999976 57899999
Q ss_pred HHHHhCCCcEEEEEeCCCCCcCCC----cccHHHHHHHHHHHHHHhcccCC
Q 002194 856 NALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 856 ~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
++|+..|+++++++||+++|.+.. .+....+++.+.+||++++....
T Consensus 262 ~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3k6k_A 262 ERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKLA 312 (322)
T ss_dssp HHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999998743 23467888999999999986543
No 72
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.80 E-value=3.6e-18 Score=181.16 Aligned_cols=225 Identities=12% Similarity=0.115 Sum_probs=153.9
Q ss_pred eEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEc
Q 002194 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (954)
Q Consensus 639 ~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (954)
....++.+.||.++++++|.|++ +++.|+||++||+++..+. .. .+.......+++. |.|+.+
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~--------~~---~~~~~~~~~l~~~-~~v~~~ 65 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMFGK--------AN---DLSPQYIDILTEH-YDLIQL 65 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTSCC--------TT---CSCHHHHHHHTTT-EEEEEE
T ss_pred ceEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccCCc--------hh---hhHHHHHHHHHhC-ceEEee
Confidence 45677888999999999999864 2347999999997532221 11 1122345555555 999995
Q ss_pred CCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC
Q 002194 719 PTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (954)
Q Consensus 719 ~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~ 798 (954)
+++ |.|.. .....++|+.++++++.++ .+.++++|+||||||.+++.++.+ ++++++|+++|..+...
T Consensus 66 d~~---~~~~~-----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~ 133 (275)
T 3h04_A 66 SYR---LLPEV-----SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT 133 (275)
T ss_dssp CCC---CTTTS-----CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS
T ss_pred ccc---cCCcc-----ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccc
Confidence 554 54433 2356788999999999887 567899999999999999999998 78999999999876421
Q ss_pred CCCC------------C-----------cc-ccchhhhcHHH-------------HH-------hcC-cccccCCCCCCE
Q 002194 799 TPFG------------F-----------QN-EDRTLWEATST-------------YV-------EMS-PFMSANKLKKPI 833 (954)
Q Consensus 799 ~~~~------------~-----------~~-~~~~~~~~~~~-------------~~-------~~s-p~~~~~~~~~P~ 833 (954)
.... . .. ........... +. .+. ....+.+++ |+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~ 212 (275)
T 3h04_A 134 EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PV 212 (275)
T ss_dssp HHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CE
T ss_pred cccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CE
Confidence 1000 0 00 00000000000 00 000 011225667 99
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccH--HHHHHHHHHHHHHhcc
Q 002194 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESI--MHVLWETDRWLQKYCV 899 (954)
Q Consensus 834 Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~fl~~~l~ 899 (954)
|++||++|..+| +.++.++++.+. +.+++++++++|.+...... .++.+.+.+||++++.
T Consensus 213 lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 213 FIAHCNGDYDVP--VEESEHIMNHVP----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEETTCSSSC--THHHHHHHTTCS----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCC--hHHHHHHHHhcC----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 999999999998 888888876543 46899999999998655443 7889999999999873
No 73
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.80 E-value=8e-20 Score=195.87 Aligned_cols=236 Identities=13% Similarity=0.125 Sum_probs=152.7
Q ss_pred eEEEEEEc-CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 639 KELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 639 ~~~~~~~~-~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
.+.+++.+ ..|.++.+.+|+|++++ ++++|+||++||+...... |... ......+++.||+|+.
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~~~-----------~~~~-~~~~~~~~~~g~~vv~ 86 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTEQN-----------FITK-SGFQRYAAEHQVIVVA 86 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCSHH-----------HHHH-SCTHHHHHHHTCEEEE
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCccc-----------hhhc-ccHHHHHhhCCeEEEE
Confidence 44555554 46889999999999865 2359999999997432111 1000 0124556778999999
Q ss_pred cCCC--CCC---------CCCCccc---c-------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHH
Q 002194 718 GPTT--PII---------GEGDEEA---N-------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANL 776 (954)
Q Consensus 718 ~~~~--~~~---------G~G~~~~---~-------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~ 776 (954)
++.. +.. |.|.++. . ..+.....+|+... +.+.. .++++++|+|+||||++|+.+
T Consensus 87 ~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~-~~~~~~~l~G~S~GG~~a~~~ 162 (283)
T 4b6g_A 87 PDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRL---IEKHF-PTNGKRSIMGHSMGGHGALVL 162 (283)
T ss_dssp ECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHH---HHHHS-CEEEEEEEEEETHHHHHHHHH
T ss_pred eccccccccccccccccccCCCcccccCccCcccchhhHHHHHHHHHHHH---HHHhC-CCCCCeEEEEEChhHHHHHHH
Confidence 6632 111 2222211 0 01123333444444 33332 246799999999999999999
Q ss_pred HHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCC--CCEEEEEeCCCCCCCCchH-HHHH
Q 002194 777 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTM-QSDR 853 (954)
Q Consensus 777 a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~-~~~~ 853 (954)
+.++|++|+++++++|+++....++...............+...+|...+.+++ .|+||+||+.|.+++ .. ++++
T Consensus 163 a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~--~~~~~~~ 240 (283)
T 4b6g_A 163 ALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLP--TQLRTED 240 (283)
T ss_dssp HHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHH--HHTCHHH
T ss_pred HHhCCccceeEEEECCccccccCcchhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCc--chhhHHH
Confidence 999999999999999987643221110000000011122334455655555443 499999999999976 42 2899
Q ss_pred HHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
++++|+..|++++++++|+++|.+. .....+..+++|+.++|
T Consensus 241 ~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 241 FIETCRAANQPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFL 282 (283)
T ss_dssp HHHHHHHHTCCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999863 23456778889998876
No 74
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.80 E-value=4.8e-20 Score=199.72 Aligned_cols=209 Identities=16% Similarity=0.157 Sum_probs=148.8
Q ss_pred eEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEc
Q 002194 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (954)
Q Consensus 639 ~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (954)
...+.|. +..+...+|+|++. .++.|+||++|||++..+... .+ ...+..|+++||+|+.+
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~----~~~~p~vv~~HGgg~~~~~~~--------~~----~~~~~~l~~~G~~v~~~ 118 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT----TNQAPLFVFVHGGYWQEMDMS--------MS----CSIVGPLVRRGYRVAVM 118 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC----CTTCCEEEEECCSTTTSCCGG--------GS----CTTHHHHHHTTCEEEEE
T ss_pred eeeeccC---CCCcEEEEEecCCC----CCCCCEEEEECCCcCcCCChh--------HH----HHHHHHHHhCCCEEEEe
Confidence 4455555 33456778888641 235899999999864432211 11 12466788999999996
Q ss_pred CCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCCC-------cccEEEEe
Q 002194 719 PTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPH-------LFCCGIAR 790 (954)
Q Consensus 719 ~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-------~~~a~v~~ 790 (954)
++++ .|.. .....+.|+.++++++.+. ...++++|+|+|||+||++++.++.+.+. +++++|++
T Consensus 119 d~r~---~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~ 190 (303)
T 4e15_A 119 DYNL---CPQV-----TLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFL 190 (303)
T ss_dssp CCCC---TTTS-----CHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEE
T ss_pred cCCC---CCCC-----ChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEE
Confidence 6643 3332 2456788999999999874 33567899999999999999999986532 79999999
Q ss_pred ccCCCCCCCCCCC-ccccchhhhcHHHHHhcCcc-cccCCC----CCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCc
Q 002194 791 SGAYNRTLTPFGF-QNEDRTLWEATSTYVEMSPF-MSANKL----KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL 864 (954)
Q Consensus 791 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp~-~~~~~~----~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 864 (954)
+|+++........ ...........+.+...+|+ ..+.++ .+|+||+||++|..|+ ..++++++++|+..|.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~ 268 (303)
T 4e15_A 191 CGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTF--IEQSRHYADVLRKKGYK 268 (303)
T ss_dssp SCCCCCHHHHTCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHH--HHHHHHHHHHHHHHTCC
T ss_pred eeeeccHhhhcccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCc--hHHHHHHHHHHHHCCCc
Confidence 9987742111000 00111112223344566777 566655 8999999999999988 99999999999999999
Q ss_pred EEEEEeCCCCCc
Q 002194 865 CRLVILPFESHG 876 (954)
Q Consensus 865 ~~~~~~~~~~H~ 876 (954)
++++++|+++|.
T Consensus 269 ~~~~~~~g~~H~ 280 (303)
T 4e15_A 269 ASFTLFKGYDHF 280 (303)
T ss_dssp EEEEEEEEEETT
T ss_pred eEEEEeCCCCch
Confidence 999999999995
No 75
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.80 E-value=4.7e-17 Score=193.27 Aligned_cols=355 Identities=12% Similarity=0.103 Sum_probs=228.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccc--------cccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceee
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELA--------RPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~ 181 (954)
.+..+.++|||+.|+....++...+++.. .....+..+.+++++......+....|.+|+.. + .....
T Consensus 182 ~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~--~--~~~~~ 257 (577)
T 2ymu_A 182 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--G--QLLQT 257 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT--S--CEEEE
T ss_pred ceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC--C--CEEEE
Confidence 34567899999999988776443344322 223334556677766554444444678999863 2 33334
Q ss_pred eecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEE
Q 002194 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (954)
Q Consensus 182 lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~ 261 (954)
+.. ....+..++|+|||+.|+.... ...|.+++.++...+.+...... +..++|+|||+.|+..
T Consensus 258 ~~~--~~~~v~~v~~~~d~~~l~~~~~---------d~~i~~w~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~t~ 321 (577)
T 2ymu_A 258 LTG--HSSSVNGVAFRPDGQTIASASD---------DKTVKLWNRNGQLLQTLTGHSSS-----VWGVAFSPDGQTIASA 321 (577)
T ss_dssp ECC--CSSCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCSSC-----EEEEEECTTSSEEEEE
T ss_pred Eec--CCCCEEEEEEcCCCCEEEEEeC---------CCEEEEEeCCCcEEEEEecCCCC-----eEEEEECCCCCEEEEE
Confidence 433 2246888999999999988652 34567778766544444433322 6688999999999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-cccccccc
Q 002194 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDP 339 (954)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~ 339 (954)
. . ...|.++++ +.....+... ..+..++|
T Consensus 322 ~---------------------~----------------------------d~~i~~w~~~~~~~~~~~~~~~~v~~~~~ 352 (577)
T 2ymu_A 322 S---------------------D----------------------------DKTVKLWNRNGQHLQTLTGHSSSVWGVAF 352 (577)
T ss_dssp E---------------------T----------------------------TSCEEEEETTSCEEEEECCCSSCEEEEEE
T ss_pred e---------------------C----------------------------CCeEEEEeCCCCeeEEEeCCCCCEEEEEE
Confidence 1 1 123555667 4455555554 66788999
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~ 419 (954)
+|||++|+..+.+ +.+.+|+.++.....+..+. ..+..++|+|||+.++..
T Consensus 353 s~~g~~l~~~~~d-------------g~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~dg~~l~~~--- 403 (577)
T 2ymu_A 353 SPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVRGVAFSPDGQTIASA--- 403 (577)
T ss_dssp CTTSSEEEEEETT-------------SEEEEEETTCCEEEEEECCS-------------SCEEEEEECTTSSCEEEE---
T ss_pred CCCCCEEEEEeCC-------------CEEEEEcCCCCEEEEecCCC-------------CCeEEEEECCCCCEEEEE---
Confidence 9999999987733 37899998877666655432 345679999999987765
Q ss_pred ccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002194 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (954)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 499 (954)
+..+.|.+|+. ++.....+..+...+..++|+||++.|+....+. .|.+++.++ +.....
T Consensus 404 ----------~~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~----~v~~w~~~~---~~~~~~ 463 (577)
T 2ymu_A 404 ----------SDDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDK----TVKLWNRNG---QLLQTL 463 (577)
T ss_dssp ----------ETTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTS---CEEEEE
T ss_pred ----------eCCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCC----EEEEEECCC---CEEEEE
Confidence 33557889985 5555566677777788899999999998876543 244445544 222223
Q ss_pred cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccccccee
Q 002194 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (954)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 579 (954)
..+...+.. +.|+|||++|+.... ...|++||.++...+.+...... +
T Consensus 464 ~~~~~~v~~------~~~spd~~~las~~~---------------------d~~i~iw~~~~~~~~~~~~h~~~-----v 511 (577)
T 2ymu_A 464 TGHSSSVRG------VAFSPDGQTIASASD---------------------DKTVKLWNRNGQLLQTLTGHSSS-----V 511 (577)
T ss_dssp ECCSSCEEE------EEECTTSCEEEEEET---------------------TSEEEEEETTSCEEEEEECCSSC-----E
T ss_pred cCCCCCEEE------EEEcCCCCEEEEEeC---------------------CCEEEEEcCCCCEEEEEeCCCCC-----E
Confidence 333333333 789999999987762 23589999765544444433321 2
Q ss_pred EEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEee
Q 002194 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (954)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt 625 (954)
.. .+|||||+.|+.... -..+++|+..+.....+.
T Consensus 512 ~~-------l~~s~dg~~l~s~~~----dg~v~lwd~~~~~~~~~~ 546 (577)
T 2ymu_A 512 RG-------VAFSPDGQTIASASD----DKTVKLWNRNGQLLQTLT 546 (577)
T ss_dssp EE-------EEECTTSSCEEEEET----TSEEEEECTTSCEEEEEE
T ss_pred EE-------EEEcCCCCEEEEEEC----cCEEEEEeCCCCEEEEEc
Confidence 22 469999987764333 256889986443333343
No 76
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.80 E-value=6.7e-19 Score=191.50 Aligned_cols=232 Identities=17% Similarity=0.131 Sum_probs=159.4
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC-CcEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAI 715 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V 715 (954)
...+.+++++.+| .+.+++|.|++ ..+.|+||++|||.+..+. ...+ ..+...|+++ ||.|
T Consensus 46 ~~~~~~~i~~~~g-~i~~~~~~p~~-----~~~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~v 107 (311)
T 2c7b_A 46 AETRDVHIPVSGG-SIRARVYFPKK-----AAGLPAVLYYHGGGFVFGS--------IETH----DHICRRLSRLSDSVV 107 (311)
T ss_dssp SEEEEEEEEETTE-EEEEEEEESSS-----CSSEEEEEEECCSTTTSCC--------TGGG----HHHHHHHHHHHTCEE
T ss_pred ceEEEEEecCCCC-cEEEEEEecCC-----CCCCcEEEEECCCcccCCC--------hhhh----HHHHHHHHHhcCCEE
Confidence 4578889998887 89999999975 1247999999997532221 1111 2355667775 9999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCC----cccEEE
Q 002194 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCCGI 788 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~a~v 788 (954)
+.+++ +|+|.+. ++...+|+.++++++.++. .+|+++|+|+|+|+||++|+.++.+.|+ .++++|
T Consensus 108 ~~~d~---rg~g~~~-----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 179 (311)
T 2c7b_A 108 VSVDY---RLAPEYK-----FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQV 179 (311)
T ss_dssp EEECC---CCTTTSC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEE
T ss_pred EEecC---CCCCCCC-----CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEE
Confidence 99555 4555442 2345788899999998762 4678899999999999999999988765 599999
Q ss_pred EeccCCCCCCCCC-----------CCcccc--chhhhc----H--HHHHhcCcccc-cCCCCCCEEEEEeCCCCCCCCch
Q 002194 789 ARSGAYNRTLTPF-----------GFQNED--RTLWEA----T--STYVEMSPFMS-ANKLKKPILLVHGEEDNNSGTLT 848 (954)
Q Consensus 789 ~~~~~~~~~~~~~-----------~~~~~~--~~~~~~----~--~~~~~~sp~~~-~~~~~~P~Lii~G~~D~~v~~~~ 848 (954)
+++|..+...... .+.... ...+.. . ......+|+.. +..+ .|+||+||++|..+
T Consensus 180 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~---- 254 (311)
T 2c7b_A 180 LIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLR---- 254 (311)
T ss_dssp EESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTH----
T ss_pred EECCccCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCch----
Confidence 9999877311000 000000 000000 0 00011233322 2233 39999999999875
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCCcCCC----cccHHHHHHHHHHHHHHhcc
Q 002194 849 MQSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 849 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (954)
.++..++++++..+.+++++++++++|.+.. .+....+.+.+.+||++++.
T Consensus 255 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 255 DEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 3567788999999999999999999998752 24457888999999999874
No 77
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=1e-17 Score=185.01 Aligned_cols=306 Identities=14% Similarity=0.085 Sum_probs=194.1
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..|+| ||++|+|+....+........+||++++++++.+++ .. +..+.|||||+.|+|......
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~------~~~~~~SpDg~~la~~~~~~~--- 81 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---EN------ATMPRISPDGKKIAFMRANEE--- 81 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ES------CEEEEECTTSSEEEEEEEETT---
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---cc------CCCeEECCCCCEEEEEEeccC---
Confidence 5677888 999999987543222233478899999999988877 11 558999999999998721100
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYIL 347 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~ 347 (954)
+ +..+||++++ +|+.++++.. . +..+.|||||++|+
T Consensus 82 ----------------------------------~-------~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~ 119 (347)
T 2gop_A 82 ----------------------------------K-------KVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLL 119 (347)
T ss_dssp ----------------------------------T-------TEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEE
T ss_pred ----------------------------------C-------CcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEE
Confidence 0 2356999999 7887777755 5 88899999999999
Q ss_pred EEeecCCccc------ccccC--------CCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCC
Q 002194 348 ISSIHRPYSF------IVPCG--------RFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (954)
Q Consensus 348 ~~s~~~~~~~------~~~~~--------~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~ 412 (954)
|.+...+... ..+.. .....|++|++++++. +.++. + .+..+.|||||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--------------~~~~~~~spdg-- 182 (347)
T 2gop_A 120 IVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--------------RFSSGIWHRDK-- 182 (347)
T ss_dssp EEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--------------TTCEEEEETTE--
T ss_pred EEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--------------CcccccCCCCe--
Confidence 9985421000 00000 0124799999998877 66654 2 12468899999
Q ss_pred ceEEEEeccCCCccccccC-CCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccc----cceEEEEEc
Q 002194 413 TLYWAETQDGGDAKVEVTP-RDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKT----RRTRTWVIS 487 (954)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~----~~~~l~~~d 487 (954)
++|.......... .. ...||+++ +++.+.++.. ..+. .+||||++|+|.+.... ...+||.++
T Consensus 183 ~~~~~~~~~~~~~----~~~~~~l~~~d-----~~~~~~l~~~-~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 183 IVVNVPHREIIPQ----YFKFWDIYIWE-----DGKEEKMFEK-VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEEECCCSSCC----SSCCEEEEEEE-----TTEEEEEEEE-ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EEEEEeccccccc----ccccccEEEeC-----CCceEEeccC-ccee--eECCCCCEEEEEEccccCCccccceEEEEC
Confidence 6666332111000 01 33677765 4556677655 3333 44999999999876532 236899999
Q ss_pred CCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEE
Q 002194 488 PGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (954)
Q Consensus 488 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 567 (954)
++ +.+.++......+.. .+.|+ || +++..... ...+|| ++ +|+.+++
T Consensus 251 --~~--~~~~l~~~~~~~~~~-----~~~~s-dg--~~~~~~~~------------------~~~~l~-~~--~g~~~~~ 297 (347)
T 2gop_A 251 --GK--EVMGILDEVDRGVGQ-----AKIKD-GK--VYFTLFEE------------------GSVNLY-IW--DGEIKPI 297 (347)
T ss_dssp --SS--CEEESSTTCCSEEEE-----EEEET-TE--EEEEEEET------------------TEEEEE-EE--SSSEEEE
T ss_pred --CC--ceEeccccCCcccCC-----ccEEc-Cc--EEEEEecC------------------CcEEEE-Ec--CCceEEE
Confidence 32 344444332111110 15688 87 45544211 133577 77 5677777
Q ss_pred eccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEeecCCCCC
Q 002194 568 WESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPY 631 (954)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~~~~ 631 (954)
+..++. +.. .+|++ .+++...+...|.++|.++ |+.++||..|..+
T Consensus 298 ~~~~~~-----v~~-------~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~~ 343 (347)
T 2gop_A 298 AKGRHW-----IMG-------FDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDPI 343 (347)
T ss_dssp ECSSSE-----EEE-------EEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTSTT
T ss_pred ecCCCe-----EEe-------eeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHhH
Confidence 654321 121 35666 5778888888888999987 7788899887643
No 78
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.80 E-value=6.8e-18 Score=179.17 Aligned_cols=221 Identities=17% Similarity=0.140 Sum_probs=151.8
Q ss_pred CCceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCc---ccHHHHHHHHC
Q 002194 636 SLQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRI---GSTSVLLWLAR 711 (954)
Q Consensus 636 ~~~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~la~~ 711 (954)
....+.+++.+. +|..+.+++|+|+++++.+ ++|+||++||+..... .|... ....+..|+++
T Consensus 29 ~g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~--~~P~vv~lHG~g~~~~-----------~~~~~~~~~~~~~~~l~~~ 95 (268)
T 1jjf_A 29 RGQVVNISYFSTATNSTRPARVYLPPGYSKDK--KYSVLYLLHGIGGSEN-----------DWFEGGGRANVIADNLIAE 95 (268)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTCCTTS--CBCEEEEECCTTCCTT-----------TTTTTTTCHHHHHHHHHHT
T ss_pred CceEEEEEEeccccCCceEEEEEeCCCCCCCC--CccEEEEECCCCCCcc-----------hhhhccccHHHHHHHHHHc
Confidence 345677888765 6789999999999875533 5999999999753211 12111 12235567776
Q ss_pred ----CcEEEEcCCCCCCCCCCcccchhhHHHHHHH-HHHHHHHHHHcCCC--CCCcEEEEeeChHHHHHHHHHHhCCCcc
Q 002194 712 ----GFAILGGPTTPIIGEGDEEANDRFVEQLVAC-AEAAVEEVVRRGVA--HPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (954)
Q Consensus 712 ----G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D-~~~av~~l~~~~~~--d~~ri~l~G~S~GG~~a~~~a~~~p~~~ 784 (954)
||+|+.+++++. +.... ..+ ....++ +.++++++.++..+ |+++++|+|+|+||++|+.++.++|++|
T Consensus 96 g~~~~~~vv~~d~~~~---~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 170 (268)
T 1jjf_A 96 GKIKPLIIVTPNTNAA---GPGIA-DGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKF 170 (268)
T ss_dssp TSSCCCEEEEECCCCC---CTTCS-CHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTC
T ss_pred CCCCCEEEEEeCCCCC---Ccccc-ccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhh
Confidence 599999766533 22111 112 222333 45666777766444 8899999999999999999999999999
Q ss_pred cEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCC-EEEEEeCCCCCCCCchHHHHHHHHHHHhCCC
Q 002194 785 CCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGHGA 863 (954)
Q Consensus 785 ~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P-~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~ 863 (954)
+++|+++|..+.... ...+.... .....+.| +|++||++|.++| . +++++++|+..|+
T Consensus 171 ~~~v~~s~~~~~~~~--------~~~~~~~~---------~~~~~~~pp~li~~G~~D~~v~--~--~~~~~~~l~~~g~ 229 (268)
T 1jjf_A 171 AYIGPISAAPNTYPN--------ERLFPDGG---------KAAREKLKLLFIACGTNDSLIG--F--GQRVHEYCVANNI 229 (268)
T ss_dssp SEEEEESCCTTSCCH--------HHHCTTTT---------HHHHHHCSEEEEEEETTCTTHH--H--HHHHHHHHHHTTC
T ss_pred hheEEeCCCCCCCch--------hhhcCcch---------hhhhhcCceEEEEecCCCCCcc--H--HHHHHHHHHHCCC
Confidence 999999997553210 00010000 00112344 9999999999875 3 7789999999999
Q ss_pred cEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 864 LCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 864 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
++++++||+++|.+. .....+..+++||.++.
T Consensus 230 ~~~~~~~~g~~H~~~---~~~~~~~~~~~~l~~~~ 261 (268)
T 1jjf_A 230 NHVYWLIQGGGHDFN---VWKPGLWNFLQMADEAG 261 (268)
T ss_dssp CCEEEEETTCCSSHH---HHHHHHHHHHHHHHHHT
T ss_pred ceEEEEcCCCCcCHh---HHHHHHHHHHHHHHhcC
Confidence 999999999999873 23455678899998874
No 79
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.79 E-value=3.5e-18 Score=181.33 Aligned_cols=227 Identities=17% Similarity=0.128 Sum_probs=160.7
Q ss_pred eEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEc
Q 002194 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (954)
Q Consensus 639 ~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (954)
.+.+.+. .+|.++.++++.|++ .+.|+||++||+... ........++..|+++||.|+.
T Consensus 22 ~~~~~~~-~~g~~l~~~~~~p~~------~~~p~vv~~HG~~~~-------------~~~~~~~~~~~~l~~~G~~v~~- 80 (270)
T 3pfb_A 22 MATITLE-RDGLQLVGTREEPFG------EIYDMAIIFHGFTAN-------------RNTSLLREIANSLRDENIASVR- 80 (270)
T ss_dssp EEEEEEE-ETTEEEEEEEEECSS------SSEEEEEEECCTTCC-------------TTCHHHHHHHHHHHHTTCEEEE-
T ss_pred ceEEEec-cCCEEEEEEEEcCCC------CCCCEEEEEcCCCCC-------------ccccHHHHHHHHHHhCCcEEEE-
Confidence 4555554 689999999998863 137999999996421 0111123456678899999999
Q ss_pred CCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC
Q 002194 719 PTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (954)
Q Consensus 719 ~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (954)
.+..|+|.+... ........+|+.++++++.++... ++++++|||+||.+++.++.++|++++++|+++|....
T Consensus 81 --~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~ 156 (270)
T 3pfb_A 81 --FDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHV--RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATL 156 (270)
T ss_dssp --ECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTE--EEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHH
T ss_pred --EccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCC--CeEEEEEeCchhHHHHHHHHhCchhhcEEEEecccccc
Confidence 555677776543 223567789999999999886433 49999999999999999999999999999999986531
Q ss_pred CC------------CCCCCccc----c-chhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHH
Q 002194 797 TL------------TPFGFQNE----D-RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALK 859 (954)
Q Consensus 797 ~~------------~~~~~~~~----~-~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~ 859 (954)
.. .+...... . .........+...++...+.++++|+|+++|++|..+| ...+.++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~ 234 (270)
T 3pfb_A 157 KGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVS--PNASKKYDQIYQ 234 (270)
T ss_dssp HHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred chhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCC--HHHHHHHHHhCC
Confidence 10 00000000 0 00001112334445566778899999999999999998 888888877643
Q ss_pred hCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 860 GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 860 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
+++++++++++|.+. .+....+.+.+.+||+++
T Consensus 235 ----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 235 ----NSTLHLIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp ----SEEEEEETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred ----CCeEEEcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 479999999999975 556778888888888764
No 80
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.79 E-value=5e-18 Score=187.16 Aligned_cols=233 Identities=17% Similarity=0.150 Sum_probs=164.0
Q ss_pred eEEE-EEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 639 KELI-KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 639 ~~~~-~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
.+.+ .+...+|.+|.++++.|.+ .+.|+||++||+..... ....++..|+++||.|++
T Consensus 34 ~~~~~~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~~---------------~~~~~~~~l~~~g~~vi~ 92 (342)
T 3hju_A 34 YQDLPHLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHSG---------------RYEELARMLMGLDLLVFA 92 (342)
T ss_dssp TTSSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCGG---------------GGHHHHHHHHTTTEEEEE
T ss_pred cccCceEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCcccc---------------hHHHHHHHHHhCCCeEEE
Confidence 3444 6778899999999998863 23799999999742111 112456678888999999
Q ss_pred cCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCC
Q 002194 718 GPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (954)
.+.+|+|.+... .......++|+.++++++..+ .+.++++|+|||+||.+++.++.++|++++++|+++|..
T Consensus 93 ---~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 167 (342)
T 3hju_A 93 ---HDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLV 167 (342)
T ss_dssp ---ECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCC
T ss_pred ---EcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECccc
Confidence 555677777542 233567789999999999887 455689999999999999999999999999999999876
Q ss_pred CCCCCCCC------------------Cccccch-h---hhcHHHHHh---------------------cCcccccCCCCC
Q 002194 795 NRTLTPFG------------------FQNEDRT-L---WEATSTYVE---------------------MSPFMSANKLKK 831 (954)
Q Consensus 795 ~~~~~~~~------------------~~~~~~~-~---~~~~~~~~~---------------------~sp~~~~~~~~~ 831 (954)
........ ....... . ......+.. .+....+.++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (342)
T 3hju_A 168 LANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTV 247 (342)
T ss_dssp SCCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCS
T ss_pred ccchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 53211000 0000000 0 000000000 011234677899
Q ss_pred CEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc--ccHHHHHHHHHHHHHHhcccC
Q 002194 832 PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR--ESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 832 P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~l~~~ 901 (954)
|+|+++|++|..++ .+.+.++++.+.. .++++++++++||.+... +....++..+++||++++...
T Consensus 248 Pvlii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (342)
T 3hju_A 248 PFLLLQGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 315 (342)
T ss_dssp CEEEEEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CEEEEEeCCCcccC--hHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCCC
Confidence 99999999999998 8888888887753 357999999999987532 224567788999999998643
No 81
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.79 E-value=1.5e-18 Score=183.48 Aligned_cols=240 Identities=14% Similarity=0.019 Sum_probs=156.2
Q ss_pred CceEEEEEEcC-CCeEEEEEEEcCCCCCC--CCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCc
Q 002194 637 LQKELIKYQRK-DGVQLSATLYLPPGYDP--SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (954)
Q Consensus 637 ~~~~~~~~~~~-~g~~l~~~l~~P~~~~~--~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (954)
|..+.+++.+. .|..+.+++|+|++++. ..+++.|+||++||+.... ..|.... .....+...||
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~-----------~~~~~~~-~~~~~~~~~~~ 72 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH-----------NSWLKRT-NVERLLRGTNL 72 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCT-----------THHHHHS-CHHHHTTTCCC
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH-----------HHHHhcc-CHHHHHhcCCe
Confidence 55677788754 68899999999988621 1123589999999974211 1110000 12222334799
Q ss_pred EEEEcCCCCCCCCCCccc--chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEec
Q 002194 714 AILGGPTTPIIGEGDEEA--NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (954)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~--~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (954)
+|+.+++. +.+.... ...+.....+|+...++.+..+..+|+++++|+|||+||++|+.++. +|++|+++|+++
T Consensus 73 ~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~ 148 (263)
T 2uz0_A 73 IVVMPNTS---NGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFS 148 (263)
T ss_dssp EEEECCCT---TSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEES
T ss_pred EEEEECCC---CCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEec
Confidence 99985543 3322221 22334555677777776654434568899999999999999999999 889999999999
Q ss_pred cCCCCCCCCCCCccc-cch----hhh--cHHHHHhcCcccccCCCC--CCEEEEEeCCCCCCCCchHHHHHHHHHHHhCC
Q 002194 792 GAYNRTLTPFGFQNE-DRT----LWE--ATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQSDRFFNALKGHG 862 (954)
Q Consensus 792 ~~~~~~~~~~~~~~~-~~~----~~~--~~~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g 862 (954)
|..+........... ... .+. ....+...+|...+.++. +|+|++||++|.++ ..+++++++|+..|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v----~~~~~~~~~l~~~g 224 (263)
T 2uz0_A 149 GALSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY----EANNLAVKNLKKLG 224 (263)
T ss_dssp CCCCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH----HHHHHHHHHHHHTT
T ss_pred CCcchhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhh----HHHHHHHHHHHHCC
Confidence 987654321100000 000 000 011223445555666665 79999999999875 45789999999999
Q ss_pred CcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhccc
Q 002194 863 ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 863 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
.+++++++++ +|.+.. ....+..+++||.++++.
T Consensus 225 ~~~~~~~~~g-~H~~~~---~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 225 FDVTYSHSAG-THEWYY---WEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp CEEEEEEESC-CSSHHH---HHHHHHHHHHHSSSCCCC
T ss_pred CCeEEEECCC-CcCHHH---HHHHHHHHHHHHHhhccc
Confidence 9999999999 998631 245678889999888753
No 82
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.79 E-value=4e-18 Score=180.30 Aligned_cols=205 Identities=17% Similarity=0.155 Sum_probs=153.2
Q ss_pred CceEEEEEEcC--CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcE
Q 002194 637 LQKELIKYQRK--DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (954)
Q Consensus 637 ~~~~~~~~~~~--~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (954)
...+.++++.. +|.. .+.+|+|... .+++.|+||++||+.... ..| ......|+++||.
T Consensus 23 ~~~~~~~~~~~~~~~~~-~~~l~~p~~~---~~~~~p~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~ 83 (262)
T 1jfr_A 23 YATSQTSVSSLVASGFG-GGTIYYPTST---ADGTFGAVVISPGFTAYQ-----------SSI----AWLGPRLASQGFV 83 (262)
T ss_dssp SCEEEEEECTTTCSSSC-CEEEEEESCC---TTCCEEEEEEECCTTCCG-----------GGT----TTHHHHHHTTTCE
T ss_pred CCccceEecceeccCCC-ceeEEecCCC---CCCCCCEEEEeCCcCCCc-----------hhH----HHHHHHHHhCCCE
Confidence 34566666654 3332 4677888652 123589999999963211 111 2356778899999
Q ss_pred EEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEe
Q 002194 715 ILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVR----RGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (954)
Q Consensus 715 V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~----~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (954)
|+.+++ .|+|.+. .....|+..+++++.+ ...++.++++++|||+||.+++.++.++|+ ++++|++
T Consensus 84 v~~~d~---~g~g~~~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~ 153 (262)
T 1jfr_A 84 VFTIDT---NTTLDQP------DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPL 153 (262)
T ss_dssp EEEECC---SSTTCCH------HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEE
T ss_pred EEEeCC---CCCCCCC------chhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEee
Confidence 999554 5666542 2345688899999988 345677899999999999999999999987 9999999
Q ss_pred ccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHH-HHHHHHHHHhCCCcEEEEE
Q 002194 791 SGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHGALCRLVI 869 (954)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~ 869 (954)
+|... ...+.++++|+|++||++|..++ .+. ++++++.++ .+.++++++
T Consensus 154 ~p~~~---------------------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~l~-~~~~~~~~~ 203 (262)
T 1jfr_A 154 TGWNT---------------------------DKTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLP-GSLDKAYLE 203 (262)
T ss_dssp SCCCS---------------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSC-TTSCEEEEE
T ss_pred cccCc---------------------------cccccccCCCEEEEecCccccCC--chhhHHHHHHHhh-cCCCceEEE
Confidence 87532 23345678999999999999998 887 999999884 356789999
Q ss_pred eCCCCCcCCCcccHHHHHHHHHHHHHHhcccC
Q 002194 870 LPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 870 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
+++++|.+.. +....+.+.+.+||++++...
T Consensus 204 ~~~~~H~~~~-~~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 204 LRGASHFTPN-TSDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp ETTCCTTGGG-SCCHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCcCCcc-cchHHHHHHHHHHHHHHhcCc
Confidence 9999998753 344678899999999998654
No 83
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.79 E-value=1.8e-18 Score=191.96 Aligned_cols=238 Identities=15% Similarity=0.069 Sum_probs=162.8
Q ss_pred CCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEE
Q 002194 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (954)
Q Consensus 636 ~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (954)
.+..+.+++++.+|..+.+++|.|++. . .+.|+||++|||.+..+.. . ..........|+++||.|
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~--~--~~~p~vv~iHGgg~~~g~~--------~--~~~~~~~~~~la~~g~~v 144 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGV--E--GVLPGLVYTHGGGMTILTT--------D--NRVHRRWCTDLAAAGSVV 144 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTC--C--SCEEEEEEECCSTTTSSCS--------S--SHHHHHHHHHHHHTTCEE
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCC--C--CCCeEEEEEcCCccccCCC--------c--ccchhHHHHHHHhCCCEE
Confidence 345677888888888999999999752 1 2589999999986433221 1 001123466788899999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh-----CCCcccEE
Q 002194 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH-----APHLFCCG 787 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~-----~p~~~~a~ 787 (954)
+.+++++..|. . +...+...+.|+.++++|+.++. .+| +|+|+|+|+||.+++.++.+ .|++++++
T Consensus 145 v~~d~r~~gg~---~-~~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~ 218 (361)
T 1jkm_A 145 VMVDFRNAWTA---E-GHHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGV 218 (361)
T ss_dssp EEEECCCSEET---T-EECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEE
T ss_pred EEEecCCCCCC---C-CCCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceE
Confidence 99776554322 1 12223556789999999998862 344 99999999999999999988 77789999
Q ss_pred EEeccCCCCCCCC---------CCCccccchhhh--c----HHHHH---------hcCcc----cccCCCCCCEEEEEeC
Q 002194 788 IARSGAYNRTLTP---------FGFQNEDRTLWE--A----TSTYV---------EMSPF----MSANKLKKPILLVHGE 839 (954)
Q Consensus 788 v~~~~~~~~~~~~---------~~~~~~~~~~~~--~----~~~~~---------~~sp~----~~~~~~~~P~Lii~G~ 839 (954)
|+++|.++..... ..+.......+. . ...|. ..+|+ ..+.++. |+||+||+
T Consensus 219 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~ 297 (361)
T 1jkm_A 219 YASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNE 297 (361)
T ss_dssp EEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEET
T ss_pred EEECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcC
Confidence 9999987752110 000000000000 0 00010 12333 2335555 99999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC-C----cccH-HHHHHHHHHHHHHhc
Q 002194 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA-A----RESI-MHVLWETDRWLQKYC 898 (954)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~-~----~~~~-~~~~~~i~~fl~~~l 898 (954)
+|..+ .++.+++++|+..|++++++++++++|.+. . .+.. ..+.+.+.+||+++.
T Consensus 298 ~D~~~----~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 298 LDPLR----DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp TCTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcch----hhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99875 378899999999999999999999999875 2 1333 677889999998864
No 84
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=2.9e-17 Score=176.15 Aligned_cols=270 Identities=14% Similarity=0.138 Sum_probs=184.2
Q ss_pred CCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechh
Q 002194 216 SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTF 295 (954)
Q Consensus 216 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 295 (954)
.....|+++|+++++.+.+...... +..++|+|||++|++.
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~~---------------------------------- 59 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPEL-----FEAPNWSPDGKYLLLN---------------------------------- 59 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSC-----CEEEEECTTSSEEEEE----------------------------------
T ss_pred CcceeEEEEeCCCCceeeeccCCcc-----eEeeEECCCCCEEEEE----------------------------------
Confidence 3467899999999988877665433 6789999999999976
Q ss_pred hhhccCccccccccccccceEEEEEe-C-CceeEcCCC---ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEE
Q 002194 296 QDLLKDEYDEDLFDYYATTQLVLVSL-D-GTVKEIGPP---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (954)
Q Consensus 296 ~d~l~~~~d~~~~~~~~~~~l~~~~~-~-G~~~~l~~~---~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l 370 (954)
....|+++++ + ++...+... ..+..++|||||++|++....... ...|++
T Consensus 60 ----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~---------~~~l~~ 114 (297)
T 2ojh_A 60 ----------------SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFG---------KSAIYL 114 (297)
T ss_dssp ----------------ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTS---------SCEEEE
T ss_pred ----------------cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCC---------cceEEE
Confidence 2346889999 7 777766643 456789999999999998843221 237888
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE
Q 002194 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (954)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (954)
++++++..+.+.... ....++|+|||+.++|.... +..-.||.++. .+++.+.
T Consensus 115 ~~~~~~~~~~~~~~~--------------~~~~~~~spdg~~l~~~~~~----------~~~~~l~~~~~---~~~~~~~ 167 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNL--------------PSYWHGWSPDGKSFTYCGIR----------DQVFDIYSMDI---DSGVETR 167 (297)
T ss_dssp EETTCCCCEECCSSS--------------SEEEEEECTTSSEEEEEEEE----------TTEEEEEEEET---TTCCEEE
T ss_pred EECCCCceEEeecCC--------------CccceEECCCCCEEEEEECC----------CCceEEEEEEC---CCCcceE
Confidence 888777666655432 23467899999988876321 12236777775 5667777
Q ss_pred EeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEee
Q 002194 451 LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (954)
Q Consensus 451 l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~ 530 (954)
+......+..+.|+|||+.|++....++ ..+||.++.+++ ....+.... ..+.. +.|+|||++|++....
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~i~~~~~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTG-QMQIWRVRVDGS--SVERITDSA-YGDWF------PHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTSS--CEEECCCCS-EEEEE------EEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCCC-CccEEEECCCCC--CcEEEecCC-cccCC------eEECCCCCEEEEEEcC
Confidence 7777777788999999999999876443 378999997764 333333221 12222 7899999999998743
Q ss_pred ccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecC
Q 002194 531 ENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESK 605 (954)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~ 605 (954)
.... ..+......|++||+++++.+.+....+. ......++|+|||+.+++.....
T Consensus 238 ~~~~----------~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVF----------DHPRDLDVRVQLMDMDGGNVETLFDLFGG---------QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCC----------SCCSSEEEEEEEEETTSCSCEEEEEEEES---------TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCC----------cccccCceEEEEEecCCCCceeeeccCCC---------CcccccceECCCCCEEEEEEecc
Confidence 2100 00000124699999999988777642211 00112367999999998877654
No 85
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.78 E-value=2.5e-18 Score=207.00 Aligned_cols=246 Identities=19% Similarity=0.216 Sum_probs=164.9
Q ss_pred EcCCCeE--EEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcc------------------cCc----------------
Q 002194 645 QRKDGVQ--LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKD------------------AAG---------------- 688 (954)
Q Consensus 645 ~~~~g~~--l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~------------------~~~---------------- 688 (954)
+..||.+ |.+.+|+|++ .+++|+||..||....... .++
T Consensus 179 ~~~DG~~d~L~a~l~~P~~-----~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 253 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS-----TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAK 253 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC-----SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC-----CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccc
Confidence 4579998 9999999986 2359999987763221100 000
Q ss_pred ---cccCCCCCCCCc-ccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc-hhhHHHHHHHHHHHHHHHHHcC---------
Q 002194 689 ---QVRGSPNEFPRI-GSTSVLLWLARGFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRRG--------- 754 (954)
Q Consensus 689 ---~~~~~~~~~~~~-~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~av~~l~~~~--------- 754 (954)
....+...|... .......|+++||+|+. .+.+|+|.+.+. ..+.....+|+.++++||..+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~---~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 254 ELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIY---VAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEE---ECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccccchhccccccccchHHHHHHCCCEEEE---ECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 000000111110 12346789999999999 555666666543 2233467899999999998531
Q ss_pred -----CCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC---------CCCCCcccc---------chhh
Q 002194 755 -----VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL---------TPFGFQNED---------RTLW 811 (954)
Q Consensus 755 -----~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~---------~~~~~~~~~---------~~~~ 811 (954)
..+..||+++|+||||++++.+|+++|+.++|+|+.+|+.++.. ...++.... ...+
T Consensus 331 ~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~ 410 (763)
T 1lns_A 331 HEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNL 410 (763)
T ss_dssp CEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGG
T ss_pred ccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhc
Confidence 12456999999999999999999999999999999998764210 000111000 0000
Q ss_pred ------------hc----------------HHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCC
Q 002194 812 ------------EA----------------TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGA 863 (954)
Q Consensus 812 ------------~~----------------~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~ 863 (954)
.. ...|...++...+++|++|+|++||..|.+|| +.++.+++++++. ++
T Consensus 411 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp--~~~a~~l~~al~~-~~ 487 (763)
T 1lns_A 411 DGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-GH 487 (763)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-TC
T ss_pred CcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCC--hHHHHHHHHhhcc-CC
Confidence 00 01233456778889999999999999999998 9999999999987 66
Q ss_pred cEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcccCC
Q 002194 864 LCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 864 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
++++++. +++|.........++.+.+.+||++||+...
T Consensus 488 ~~~l~i~-~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~~ 525 (763)
T 1lns_A 488 AKHAFLH-RGAHIYMNSWQSIDFSETINAYFVAKLLDRD 525 (763)
T ss_dssp CEEEEEE-SCSSCCCTTBSSCCHHHHHHHHHHHHHTTCC
T ss_pred CeEEEEe-CCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 7777664 5689864322233567899999999998653
No 86
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.77 E-value=3.5e-18 Score=185.19 Aligned_cols=193 Identities=18% Similarity=0.151 Sum_probs=149.0
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.. .+.+|+|.+.. +.|+||++||+.... .....+...|+++||.|+.++ ..|+
T Consensus 79 ~~g~~-~~~~~~p~~~~-----~~p~vv~~HG~~~~~---------------~~~~~~~~~la~~G~~vv~~d---~~g~ 134 (306)
T 3vis_A 79 ADGFG-GGTIYYPRENN-----TYGAIAISPGYTGTQ---------------SSIAWLGERIASHGFVVIAID---TNTT 134 (306)
T ss_dssp CSSSC-CEEEEEESSCS-----CEEEEEEECCTTCCH---------------HHHHHHHHHHHTTTEEEEEEC---CSST
T ss_pred cCCCc-ceEEEeeCCCC-----CCCEEEEeCCCcCCH---------------HHHHHHHHHHHhCCCEEEEec---CCCC
Confidence 44543 35778886521 489999999963110 011245677888999999954 4566
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC
Q 002194 727 GDEEANDRFVEQLVACAEAAVEEVVRR------GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (954)
Q Consensus 727 G~~~~~~~~~~~~~~D~~~av~~l~~~------~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~ 800 (954)
|.+. .....|+.++++++.+. ..+|+++++++|||+||.+++.++.++|+ ++++|+++|...
T Consensus 135 g~s~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~----- 202 (306)
T 3vis_A 135 LDQP------DSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL----- 202 (306)
T ss_dssp TCCH------HHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----
T ss_pred CCCc------chHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-----
Confidence 6652 23447888999999987 67888999999999999999999999987 999999988532
Q ss_pred CCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchH-HHHHHHHHHHhCCCcEEEEEeCCCCCcCCC
Q 002194 801 FGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTM-QSDRFFNALKGHGALCRLVILPFESHGYAA 879 (954)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 879 (954)
...+.++++|+|++||++|..+| ++ +++++++.++..+ +++++++++++|.+.
T Consensus 203 ----------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~- 256 (306)
T 3vis_A 203 ----------------------NKSWRDITVPTLIIGAEYDTIAS--VTLHSKPFYNSIPSPT-DKAYLELDGASHFAP- 256 (306)
T ss_dssp ----------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHTCCTTS-CEEEEEETTCCTTGG-
T ss_pred ----------------------ccccccCCCCEEEEecCCCcccC--cchhHHHHHHHhccCC-CceEEEECCCCccch-
Confidence 12345678999999999999998 77 6999999888766 799999999999874
Q ss_pred cccHHHHHHHHHHHHHHhcccC
Q 002194 880 RESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 880 ~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
.+....+.+.+.+||++++...
T Consensus 257 ~~~~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 257 NITNKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp GSCCHHHHHHHHHHHHHHHSCC
T ss_pred hhchhHHHHHHHHHHHHHccCc
Confidence 3334678889999999998654
No 87
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.77 E-value=1.7e-17 Score=169.83 Aligned_cols=186 Identities=16% Similarity=0.096 Sum_probs=138.6
Q ss_pred CCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH--CCcEEEEcCCC----------------CCCCCCCc
Q 002194 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPTT----------------PIIGEGDE 729 (954)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~V~~~~~~----------------~~~G~G~~ 729 (954)
.+.|+||++||+... ...| ......|++ +||.|++++.. +..|+|.+
T Consensus 12 ~~~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 76 (218)
T 1auo_A 12 PADACVIWLHGLGAD-----------RYDF----MPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPA 76 (218)
T ss_dssp CCSEEEEEECCTTCC-----------TTTT----HHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSS
T ss_pred CCCcEEEEEecCCCC-----------hhhH----HHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcc
Confidence 357999999996311 1112 245667777 99999996542 34455543
Q ss_pred ccc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH-hCCCcccEEEEeccCCCCCCCCCCCcccc
Q 002194 730 EAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA-HAPHLFCCGIARSGAYNRTLTPFGFQNED 807 (954)
Q Consensus 730 ~~~-~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~~~~~~~~~~~~~~~~~ 807 (954)
... ........+|+..+++++.+ ..+++++++++|||+||.+++.++. ++|++++++|+++|...... +..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~----~~~-- 149 (218)
T 1auo_A 77 RSISLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG----DEL-- 149 (218)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC----TTC--
T ss_pred cccchHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch----hhh--
Confidence 222 22345567778888888776 3478889999999999999999999 99999999999999765300 000
Q ss_pred chhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHH
Q 002194 808 RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVL 887 (954)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 887 (954)
.....++++|+|++||++|..+| ++.++++++.++..|.++++++++ ++|.+. .+..
T Consensus 150 ---------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~ 206 (218)
T 1auo_A 150 ---------------ELSASQQRIPALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL-----PQEI 206 (218)
T ss_dssp ---------------CCCHHHHTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCC-----HHHH
T ss_pred ---------------hhhhcccCCCEEEEEeCCCceec--HHHHHHHHHHHHhCCCceEEEEec-CCCccC-----HHHH
Confidence 00113457899999999999998 999999999999988899999999 999874 3456
Q ss_pred HHHHHHHHHhc
Q 002194 888 WETDRWLQKYC 898 (954)
Q Consensus 888 ~~i~~fl~~~l 898 (954)
+.+.+||.+++
T Consensus 207 ~~~~~~l~~~l 217 (218)
T 1auo_A 207 HDIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 78999999886
No 88
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.77 E-value=2.6e-17 Score=177.17 Aligned_cols=228 Identities=17% Similarity=0.161 Sum_probs=158.9
Q ss_pred EEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCC
Q 002194 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (954)
Q Consensus 643 ~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (954)
.+...+|.++.++++.|.+ .+.|+||++||..... ..| ...+..|+++||.|++ .+
T Consensus 21 ~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~~-----------~~~----~~~~~~l~~~g~~v~~---~d 76 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEHS-----------GRY----EELARMLMGLDLLVFA---HD 76 (303)
T ss_dssp EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------GGG----HHHHHHHHHTTEEEEE---EC
T ss_pred eEecCCCeEEEEEEeccCC------CCCeEEEEECCCCchh-----------hHH----HHHHHHHHhCCCcEEE---eC
Confidence 5778899999999998763 2379999999964211 011 2456778889999999 55
Q ss_pred CCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC-
Q 002194 723 IIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL- 798 (954)
Q Consensus 723 ~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~- 798 (954)
..|+|.+.... ......++|+.++++++.... +..+++++|||+||.+++.++.++|++++++|+++|......
T Consensus 77 ~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 154 (303)
T 3pe6_A 77 HVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE 154 (303)
T ss_dssp CTTSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchh
Confidence 66777775321 234677899999999998773 456899999999999999999999999999999998754210
Q ss_pred ----------------CCCCCccccchhh-----hcHHHHHh---------------------cCcccccCCCCCCEEEE
Q 002194 799 ----------------TPFGFQNEDRTLW-----EATSTYVE---------------------MSPFMSANKLKKPILLV 836 (954)
Q Consensus 799 ----------------~~~~~~~~~~~~~-----~~~~~~~~---------------------~sp~~~~~~~~~P~Lii 836 (954)
............+ .....+.. ......+.++++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 234 (303)
T 3pe6_A 155 SATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLL 234 (303)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEE
T ss_pred ccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEE
Confidence 0000000000000 00000000 01123467789999999
Q ss_pred EeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc--ccHHHHHHHHHHHHHHhccc
Q 002194 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR--ESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~l~~ 900 (954)
+|++|..++ ...++++++.+.. ..+++++++++||.+... +....+++.+++||++++..
T Consensus 235 ~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 235 QGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp EETTCSSBC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeCCCCCCC--hHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 999999998 8888888887642 358999999999987432 22456778899999998753
No 89
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.77 E-value=1.8e-16 Score=173.69 Aligned_cols=301 Identities=9% Similarity=0.011 Sum_probs=192.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccc---------cccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCcee
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELA---------RPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~ 180 (954)
.+..++|||||+.+++.........+... .....+..+.+++++......+ .+.|.+|++..........
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~ 89 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVS 89 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSE
T ss_pred ceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeee
Confidence 45678899999999877654322222111 1222334556666654444333 5789999996532111222
Q ss_pred eeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeec--ccCCCccccccccceeEecCCeEE
Q 002194 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNNSTLL 258 (954)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l--t~~~~~~~~~~~~~~~wspDG~~l 258 (954)
.+........+..+.|+|||+.|+.... ...|.++++++++.... ...... .+..+.|+|||+.|
T Consensus 90 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l 156 (337)
T 1gxr_A 90 QLDCLNRDNYIRSCKLLPDGCTLIVGGE---------ASTLSIWDLAAPTPRIKAELTSSAP----ACYALAISPDSKVC 156 (337)
T ss_dssp EEECSCTTSBEEEEEECTTSSEEEEEES---------SSEEEEEECCCC--EEEEEEECSSS----CEEEEEECTTSSEE
T ss_pred cccccCCCCcEEEEEEcCCCCEEEEEcC---------CCcEEEEECCCCCcceeeecccCCC----ceEEEEECCCCCEE
Confidence 2221123347889999999999988652 45788888887763222 111221 16688999999988
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-cccc
Q 002194 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYT 335 (954)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~ 335 (954)
+... ....|.++++ +++. ..+... ..+.
T Consensus 157 ~~~~-------------------------------------------------~dg~v~~~d~~~~~~~~~~~~~~~~i~ 187 (337)
T 1gxr_A 157 FSCC-------------------------------------------------SDGNIAVWDLHNQTLVRQFQGHTDGAS 187 (337)
T ss_dssp EEEE-------------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEEe-------------------------------------------------CCCcEEEEeCCCCceeeeeecccCceE
Confidence 8761 1234778888 6653 344434 6788
Q ss_pred ccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 336 ~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
.++|+|||++|+..+.+ +.+.+||+.+++........ ..+..++|+|||+.++.
T Consensus 188 ~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGLD-------------NTVRSWDLREGRQLQQHDFT-------------SQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp EEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEecC-------------CcEEEEECCCCceEeeecCC-------------CceEEEEECCCCCEEEE
Confidence 99999999999988733 38999999876543332221 23467899999997776
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCc
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP 495 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 495 (954)
. ...+.+++|++ .+++...+..+...+..++|+|||+.|+....++ .|.++++.++ +.
T Consensus 242 ~-------------~~~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~--~~ 299 (337)
T 1gxr_A 242 G-------------MESSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYG--AS 299 (337)
T ss_dssp E-------------ETTSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC--CE
T ss_pred E-------------cCCCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCEEEEecCCC----cEEEEECCCC--eE
Confidence 5 33557899996 5556666666777788999999999988776432 4666666664 22
Q ss_pred EEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 496 RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 496 ~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
.... .....+.. +.|+|||++++...
T Consensus 300 ~~~~-~~~~~v~~------~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 300 IFQS-KESSSVLS------CDISVDDKYIVTGS 325 (337)
T ss_dssp EEEE-ECSSCEEE------EEECTTSCEEEEEE
T ss_pred EEEe-cCCCcEEE------EEECCCCCEEEEec
Confidence 2222 22222333 78999999988776
No 90
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.77 E-value=2.7e-17 Score=170.54 Aligned_cols=214 Identities=16% Similarity=0.116 Sum_probs=153.5
Q ss_pred EEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC
Q 002194 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (954)
+...+|. ..++|.|.+ +.|+||++||+..... .| ...+..|+++||.|+. .+.
T Consensus 7 ~~~~~g~--~~~~~~~~~-------~~~~vv~~hG~~~~~~-----------~~----~~~~~~l~~~G~~v~~---~d~ 59 (238)
T 1ufo_A 7 RLTLAGL--SVLARIPEA-------PKALLLALHGLQGSKE-----------HI----LALLPGYAERGFLLLA---FDA 59 (238)
T ss_dssp EEEETTE--EEEEEEESS-------CCEEEEEECCTTCCHH-----------HH----HHTSTTTGGGTEEEEE---CCC
T ss_pred ccccCCE--EEEEEecCC-------CccEEEEECCCcccch-----------HH----HHHHHHHHhCCCEEEE---ecC
Confidence 3344664 445677754 3699999999632110 01 1123356778999999 555
Q ss_pred CCCCCcccch---h----------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEe
Q 002194 724 IGEGDEEAND---R----------FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (954)
Q Consensus 724 ~G~G~~~~~~---~----------~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (954)
.|+|.+.... . ......+|+.++++++.+++. ++++++|||+||.+++.++.++|+.+++++..
T Consensus 60 ~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 136 (238)
T 1ufo_A 60 PRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFI 136 (238)
T ss_dssp TTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEES
T ss_pred CCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEe
Confidence 5666654321 1 245668899999999987653 68999999999999999999999989988888
Q ss_pred ccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCC-CCCEEEEEeCCCCCCCCchHHHHHHHHHHH-hCCC-cEEE
Q 002194 791 SGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALK-GHGA-LCRL 867 (954)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~-~~g~-~~~~ 867 (954)
++..........+.. -.....+...++...+.++ ++|+|++||++|..+| .+.++++++.++ ..+. ++++
T Consensus 137 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~ 209 (238)
T 1ufo_A 137 GSGFPMKLPQGQVVE-----DPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLAR 209 (238)
T ss_dssp CCSSCCCCCTTCCCC-----CHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTCCEEE
T ss_pred cCCccchhhhhhccC-----CcccchhhcCChhhhhhhccCCcEEEEECCCCCccC--cHHHHHHHHHHhhcCCCCceEE
Confidence 765332211111100 0113345556777777888 8999999999999998 899999999999 8877 8999
Q ss_pred EEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 868 VILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 868 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+++++++|.+. .+..+.+.+||.+++.
T Consensus 210 ~~~~~~~H~~~-----~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 210 FVEEGAGHTLT-----PLMARVGLAFLEHWLE 236 (238)
T ss_dssp EEETTCCSSCC-----HHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcccH-----HHHHHHHHHHHHHHHh
Confidence 99999999874 3456788999998874
No 91
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.77 E-value=6.9e-18 Score=178.89 Aligned_cols=198 Identities=16% Similarity=0.064 Sum_probs=139.4
Q ss_pred EEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH--CCcEEEEcCC---CCCCCCC
Q 002194 653 SATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPT---TPIIGEG 727 (954)
Q Consensus 653 ~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~V~~~~~---~~~~G~G 727 (954)
..+...|+. + ..+.|+||++||..... ..|. .++..|+. .++.++.++. ....|.|
T Consensus 53 l~y~~~p~~--~--~~~~plVI~LHG~G~~~-----------~~~~----~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G 113 (285)
T 4fhz_A 53 LTFGRRGAA--P--GEATSLVVFLHGYGADG-----------ADLL----GLAEPLAPHLPGTAFVAPDAPEPCRANGFG 113 (285)
T ss_dssp CCEEEEESC--T--TCCSEEEEEECCTTBCH-----------HHHH----TTHHHHGGGSTTEEEEEECCSEECTTSSSC
T ss_pred ceeecCCCC--C--CCCCcEEEEEcCCCCCH-----------HHHH----HHHHHHHHhCCCeEEEecCCCcccccCCCc
Confidence 334445543 2 23589999999942110 0011 12344554 3788887542 2233445
Q ss_pred Ccccch------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCC
Q 002194 728 DEEAND------------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (954)
Q Consensus 728 ~~~~~~------------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (954)
.++.+. ........++.+.++.+.++..+|++||+|+|+|+||++|+.++.++|+.|+++|++++...
T Consensus 114 ~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~ 193 (285)
T 4fhz_A 114 FQWFPIPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLL 193 (285)
T ss_dssp EESSCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCS
T ss_pred ccccccccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCcc
Confidence 443211 11223356677777877777779999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCC
Q 002194 796 RTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESH 875 (954)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 875 (954)
. ++.+. ...+.++|+|++||++|.+|| ++++++++++|+..|.++++++|+++||
T Consensus 194 ~-----------------~~~~~------~~~~~~~Pvl~~hG~~D~~Vp--~~~~~~~~~~L~~~g~~~~~~~y~g~gH 248 (285)
T 4fhz_A 194 A-----------------PERLA------EEARSKPPVLLVHGDADPVVP--FADMSLAGEALAEAGFTTYGHVMKGTGH 248 (285)
T ss_dssp C-----------------HHHHH------HHCCCCCCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEETTCCS
T ss_pred C-----------------chhhh------hhhhhcCcccceeeCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEECCCCC
Confidence 0 00111 112346899999999999999 9999999999999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHhcc
Q 002194 876 GYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 876 ~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
.+. .+.++.+.+||+++|-
T Consensus 249 ~i~-----~~~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 249 GIA-----PDGLSVALAFLKERLP 267 (285)
T ss_dssp SCC-----HHHHHHHHHHHHHHCC
T ss_pred CCC-----HHHHHHHHHHHHHHCc
Confidence 985 3457789999999984
No 92
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.77 E-value=6.4e-18 Score=171.35 Aligned_cols=184 Identities=13% Similarity=0.057 Sum_probs=123.4
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCccc-----chhhHHHHHHHH
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA-----NDRFVEQLVACA 743 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~-----~~~~~~~~~~D~ 743 (954)
..++||++||..... ..|. ..+..|...||.|++++..+..+++.... .........+.+
T Consensus 21 a~~~Vv~lHG~G~~~-----------~~~~----~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i 85 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTA-----------ADII----SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALV 85 (210)
T ss_dssp CSEEEEEECCTTCCH-----------HHHH----GGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCH-----------HHHH----HHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHH
Confidence 368999999942110 0010 12233445799999977654433322211 111222333344
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcc
Q 002194 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPF 823 (954)
Q Consensus 744 ~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 823 (954)
...++.+.+. .+|++||+++|+|+||++|+.++.++|++|+++|+++|.+...... . ...
T Consensus 86 ~~~~~~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~----~------------~~~--- 145 (210)
T 4h0c_A 86 GEVVAEIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA----I------------GNY--- 145 (210)
T ss_dssp HHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC----G------------GGC---
T ss_pred HHHHHHHHHh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh----h------------hhh---
Confidence 4444444444 4899999999999999999999999999999999998853211000 0 000
Q ss_pred cccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
.....++|+|++||++|.+|| +++++++++.|+..|.++++++||+++|.+. .+.++.+.+||.
T Consensus 146 -~~~~~~~Pvl~~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-----~~el~~i~~wL~ 209 (210)
T 4h0c_A 146 -KGDFKQTPVFISTGNPDPHVP--VSRVQESVTILEDMNAAVSQVVYPGRPHTIS-----GDEIQLVNNTIL 209 (210)
T ss_dssp -CBCCTTCEEEEEEEESCTTSC--HHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-----HHHHHHHHHTTT
T ss_pred -hhhccCCceEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-----HHHHHHHHHHHc
Confidence 011235799999999999999 9999999999999999999999999999985 233456666654
No 93
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.76 E-value=2.8e-17 Score=183.62 Aligned_cols=240 Identities=13% Similarity=0.077 Sum_probs=160.4
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCc--ccHHHHHHHHCCcE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRI--GSTSVLLWLARGFA 714 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~la~~G~~ 714 (954)
++.+.+++.+.||..+.++.+.|........++.|+||++||.+..... |... ...++..|+++||.
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~-----------~~~~~~~~~~a~~l~~~G~~ 93 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATN-----------WISNLPNNSLAFILADAGYD 93 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGG-----------GSSSCTTTCHHHHHHHTTCE
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhh-----------hhcCCCcccHHHHHHHCCCC
Confidence 4568888999999999998886653110011247899999997533221 1111 12356678899999
Q ss_pred EEEcCCCCCCCCCCcccc-----------hhhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC
Q 002194 715 ILGGPTTPIIGEGDEEAN-----------DRFVEQLVA-CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (954)
Q Consensus 715 V~~~~~~~~~G~G~~~~~-----------~~~~~~~~~-D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 782 (954)
|++ .+.+|+|.+... ........+ |+.++++++.+.. +.+++.++||||||.+++.++.++|+
T Consensus 94 vi~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~ 168 (377)
T 1k8q_A 94 VWL---GNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPK 168 (377)
T ss_dssp EEE---CCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHH
T ss_pred EEE---ecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCch
Confidence 999 666677777542 123455666 9999999987763 34689999999999999999999988
Q ss_pred ---cccEEEEeccCCCCCCCCCCCc-------------------cccchhh-----------------------------
Q 002194 783 ---LFCCGIARSGAYNRTLTPFGFQ-------------------NEDRTLW----------------------------- 811 (954)
Q Consensus 783 ---~~~a~v~~~~~~~~~~~~~~~~-------------------~~~~~~~----------------------------- 811 (954)
+++++|+++|..........+. ......+
T Consensus 169 ~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (377)
T 1k8q_A 169 LAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDT 248 (377)
T ss_dssp HHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCG
T ss_pred hhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCc
Confidence 8999999998754321110000 0000000
Q ss_pred -----hcHHH----------------------------------------HHhcC-cccccCCCCCCEEEEEeCCCCCCC
Q 002194 812 -----EATST----------------------------------------YVEMS-PFMSANKLKKPILLVHGEEDNNSG 845 (954)
Q Consensus 812 -----~~~~~----------------------------------------~~~~s-p~~~~~~~~~P~Lii~G~~D~~v~ 845 (954)
+.... |.... +...+.++++|+|++||++|.++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 328 (377)
T 1k8q_A 249 MNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred ccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccC
Confidence 00000 00000 122367889999999999999998
Q ss_pred CchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCC--cccHHHHHHHHHHHHHHh
Q 002194 846 TLTMQSDRFFNALKGHGALCRLVILPFESHGYAA--RESIMHVLWETDRWLQKY 897 (954)
Q Consensus 846 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~--~~~~~~~~~~i~~fl~~~ 897 (954)
++.++++++.+... .++++++++||.... .+....+.+.|.+||++|
T Consensus 329 --~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 329 --PHDVDLLLSKLPNL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp --HHHHHHHHTTCTTE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred --HHHHHHHHHhCcCc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 88888877766432 248899999998642 356778889999999753
No 94
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.76 E-value=8.5e-18 Score=189.81 Aligned_cols=233 Identities=17% Similarity=0.190 Sum_probs=160.9
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
...+.++++. +|..++++++.+ + +.+.|+||++||+..... .+.......++++||.|+
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~-~-----~~~~p~vv~~HG~~~~~~--------------~~~~~~~~~~~~~g~~vi 191 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIIS-E-----DKAQDTLIVVGGGDTSRE--------------DLFYMLGYSGWEHDYNVL 191 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECC-S-----SSCCCEEEEECCSSCCHH--------------HHHHHTHHHHHHTTCEEE
T ss_pred CCcEEEEEeE-CCeEEEEEEEcC-C-----CCCCCEEEEECCCCCCHH--------------HHHHHHHHHHHhCCcEEE
Confidence 3467778876 688999998843 2 223699999999521100 001112225668999999
Q ss_pred EcCCCCCCCCCCcccch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCC
Q 002194 717 GGPTTPIIGEGDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (954)
. .+.+|+|.+.... .+......|+.+++++|..+. ++|+|+|||+||++++.++.++| +++++|+.+|+.+
T Consensus 192 ~---~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~ 263 (405)
T 3fnb_A 192 M---VDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYD 263 (405)
T ss_dssp E---ECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSC
T ss_pred E---EcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCC
Confidence 9 5566777774321 122244788889999987654 68999999999999999999998 8999999999876
Q ss_pred CCCC-----------CCCCcc---------ccchhhh---------------cHHHHHhcCcccccCCCCCCEEEEEeCC
Q 002194 796 RTLT-----------PFGFQN---------EDRTLWE---------------ATSTYVEMSPFMSANKLKKPILLVHGEE 840 (954)
Q Consensus 796 ~~~~-----------~~~~~~---------~~~~~~~---------------~~~~~~~~sp~~~~~~~~~P~Lii~G~~ 840 (954)
.... +..... .....|. ....+....+...+.++++|+||+||++
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 343 (405)
T 3fnb_A 264 VAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAG 343 (405)
T ss_dssp HHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETT
T ss_pred HHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCC
Confidence 2110 000000 0000000 0122223344444778899999999999
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcC--CCcccHHHHHHHHHHHHHHhccc
Q 002194 841 DNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY--AARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 841 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
|..+| +.++.++++.++..+.++++++++++.|.. ...++...+.+.|.+||+++++.
T Consensus 344 D~~v~--~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 344 EDSEL--MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp SCHHH--HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred CcCCC--hHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 99988 999999999999999899999997665542 24567788899999999999853
No 95
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.76 E-value=4.9e-18 Score=179.60 Aligned_cols=201 Identities=15% Similarity=0.122 Sum_probs=147.3
Q ss_pred EEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcC
Q 002194 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (954)
Q Consensus 640 ~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (954)
+...++-.+|..+.+.+|.|++ .+.|+||++|||.+..+.. ..| ..++..|+++||.|+.++
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~------~~~p~vv~~HGgg~~~~~~--------~~~----~~~~~~l~~~G~~v~~~d 100 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFDK--------SSW----SHLAVGALSKGWAVAMPS 100 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCCG--------GGC----GGGGHHHHHTTEEEEEEC
T ss_pred CccccccCCCCCceEEEEccCC------CCCCEEEEEcCcccccCCh--------HHH----HHHHHHHHhCCCEEEEeC
Confidence 3444554566667778888864 2379999999975322111 112 134567888999999966
Q ss_pred CCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC------CCcccEEEEeccC
Q 002194 720 TTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA------PHLFCCGIARSGA 793 (954)
Q Consensus 720 ~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~------p~~~~a~v~~~~~ 793 (954)
++ |.+. ......++|+.++++++..+.. ++++|+||||||.+++.++.+. |++++++|+++|+
T Consensus 101 ~~---~~~~-----~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~ 169 (262)
T 2pbl_A 101 YE---LCPE-----VRISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPL 169 (262)
T ss_dssp CC---CTTT-----SCHHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCC
T ss_pred CC---CCCC-----CChHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCc
Confidence 64 4332 2356778999999999988753 6899999999999999999887 7899999999998
Q ss_pred CCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002194 794 YNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (954)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 873 (954)
++.......+ ...........+...+|...+.++++|+|++||++|..++ .++++++++.++ +++++++++
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~-----~~~~~~~~~ 240 (262)
T 2pbl_A 170 SDLRPLLRTS--MNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEK 240 (262)
T ss_dssp CCCGGGGGST--THHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTC
T ss_pred cCchHHHhhh--hhhhhCCCHHHHHhcCcccccCCCCCCEEEEEeCCCCccc--HHHHHHHHHHhC-----CeEEEeCCC
Confidence 7642211011 0111122344556778888888899999999999999988 899999999886 689999999
Q ss_pred CCcCC
Q 002194 874 SHGYA 878 (954)
Q Consensus 874 ~H~~~ 878 (954)
+|...
T Consensus 241 ~H~~~ 245 (262)
T 2pbl_A 241 HHFNV 245 (262)
T ss_dssp CTTTT
T ss_pred CcchH
Confidence 99874
No 96
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.76 E-value=4.2e-17 Score=165.89 Aligned_cols=180 Identities=14% Similarity=0.083 Sum_probs=132.7
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCC----------CCCCCCccc---chhh
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP----------IIGEGDEEA---NDRF 735 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~----------~~G~G~~~~---~~~~ 735 (954)
+.| ||++||..... ..| ......|+ .||.|+.++... ..|+|.... ....
T Consensus 16 ~~p-vv~lHG~g~~~-----------~~~----~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~ 78 (209)
T 3og9_A 16 LAP-LLLLHSTGGDE-----------HQL----VEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLES 78 (209)
T ss_dssp SCC-EEEECCTTCCT-----------TTT----HHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHH
T ss_pred CCC-EEEEeCCCCCH-----------HHH----HHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHH
Confidence 478 99999953111 111 12344444 899999966321 223333211 1223
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHH
Q 002194 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATS 815 (954)
Q Consensus 736 ~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (954)
.....+++.+.++.+.++..+|+++++|+||||||.+++.++.++|++++++|+++|.......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~---------------- 142 (209)
T 3og9_A 79 LDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE---------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC----------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc----------------
Confidence 4556777778888887776789999999999999999999999999999999999986442110
Q ss_pred HHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 816 TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 816 ~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
.......+|+|++||++|.+|| +++++++++.|+..+.++++.+|+ ++|.+. .+..+.+.+||+
T Consensus 143 --------~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~ 206 (209)
T 3og9_A 143 --------QTVQLDDKHVFLSYAPNDMIVP--QKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLT 206 (209)
T ss_dssp --------CCCCCTTCEEEEEECTTCSSSC--HHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHH
T ss_pred --------ccccccCCCEEEEcCCCCCccC--HHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHH
Confidence 1123457899999999999999 999999999999999999999998 699984 345688899998
Q ss_pred Hh
Q 002194 896 KY 897 (954)
Q Consensus 896 ~~ 897 (954)
++
T Consensus 207 ~~ 208 (209)
T 3og9_A 207 ET 208 (209)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 97
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.76 E-value=2.7e-17 Score=174.07 Aligned_cols=227 Identities=13% Similarity=0.088 Sum_probs=153.9
Q ss_pred ceEEEEE-EcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 638 QKELIKY-QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~-~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
..+.+++ .+.+|.++.+..+.+++ .+.|+||++||+.... ..+ ........++++||.|+
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~------~~~~~vv~~HG~~~~~-----------~~~--~~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ------DERPTCIWLGGYRSDM-----------TGT--KALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS------TTSCEEEEECCTTCCT-----------TSH--HHHHHHHHHHHHTCEEE
T ss_pred CcceEEEeeccCcceEEEEeccCCC------CCCCeEEEECCCcccc-----------ccc--hHHHHHHHHHhCCCcEE
Confidence 3455555 56699999888776542 1268999999963110 000 01124556678999999
Q ss_pred EcCCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh---CC---CcccEEE
Q 002194 717 GGPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH---AP---HLFCCGI 788 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~---~p---~~~~a~v 788 (954)
. .+..|+|.+... ........+|+.++++++. .++++++|||+||.+++.++.+ +| ++++++|
T Consensus 71 ~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~i 141 (270)
T 3llc_A 71 R---FDYSGHGASGGAFRDGTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMV 141 (270)
T ss_dssp E---ECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEE
T ss_pred E---eccccCCCCCCccccccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeE
Confidence 9 555677776443 2345667888888888873 5689999999999999999999 99 8999999
Q ss_pred EeccCCCCCCCC-C-CCcc--------------------c-cchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCC
Q 002194 789 ARSGAYNRTLTP-F-GFQN--------------------E-DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSG 845 (954)
Q Consensus 789 ~~~~~~~~~~~~-~-~~~~--------------------~-~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~ 845 (954)
+++|..+..... + .+.. . ..........+........+.++++|+|++||++|..+|
T Consensus 142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 221 (270)
T 3llc_A 142 LIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVP 221 (270)
T ss_dssp EESCCTTHHHHTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSC
T ss_pred EecCcccchhhhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCC
Confidence 999875421100 0 0000 0 000001112233334455677889999999999999998
Q ss_pred CchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 846 TLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 846 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
.+.+.++++.+.. .+++++++++++|.+...+....+.+.+.+||++
T Consensus 222 --~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 222 --YQHALKLVEHLPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp --HHHHHHHHHTSCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHhcCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 8888888877643 3589999999999876556666666777777654
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.76 E-value=1.9e-15 Score=169.81 Aligned_cols=357 Identities=14% Similarity=0.091 Sum_probs=215.6
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
+.|++|++.. ++.... +..+..+..++|||||++|+++.. ....|+++|+.+++.......+..
T Consensus 12 ~~v~v~d~~~----~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~-- 75 (391)
T 1l0q_A 12 DNISVIDVTS----NKVTAT--IPVGSNPMGAVISPDGTKVYVANA--------HSNDVSIIDTATNNVIATVPAGSS-- 75 (391)
T ss_dssp TEEEEEETTT----TEEEEE--EECSSSEEEEEECTTSSEEEEEEG--------GGTEEEEEETTTTEEEEEEECSSS--
T ss_pred CEEEEEECCC----CeEEEE--eecCCCcceEEECCCCCEEEEECC--------CCCeEEEEECCCCeEEEEEECCCC--
Confidence 4799999854 333222 222335788999999999877642 246899999988887665554442
Q ss_pred cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-
Q 002194 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (954)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~- 321 (954)
+..++|+|||+.|+++.. ....|+++|+
T Consensus 76 ---v~~~~~spdg~~l~~~~~------------------------------------------------~~~~v~v~d~~ 104 (391)
T 1l0q_A 76 ---PQGVAVSPDGKQVYVTNM------------------------------------------------ASSTLSVIDTT 104 (391)
T ss_dssp ---EEEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEETT
T ss_pred ---ccceEECCCCCEEEEEEC------------------------------------------------CCCEEEEEECC
Confidence 678999999999987610 1245888898
Q ss_pred CCceeEcCC-CccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccC
Q 002194 322 DGTVKEIGP-PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (954)
Q Consensus 322 ~G~~~~l~~-~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g 400 (954)
+++...... ...+..++|+|||++|+++... .+.+++||+.+++........ ..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~-------------~~ 159 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG------------DKTVSVINTVTKAVINTVSVG-------------RS 159 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEEECC-------------SS
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCC------------CCEEEEEECCCCcEEEEEecC-------------CC
Confidence 775544333 3567889999999999877633 238999999876554332211 23
Q ss_pred ccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccc
Q 002194 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (954)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (954)
+..+.|+|||+.+++. . ...+.|++|++ .+++..........+..++|+|||+.|+....... .
T Consensus 160 ~~~~~~~~dg~~l~~~-~-----------~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~-~ 223 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVA-N-----------FDSMSISVIDT---VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKY-F 223 (391)
T ss_dssp EEEEEECTTSSEEEEE-E-----------TTTTEEEEEET---TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSS-C
T ss_pred cceEEECCCCCEEEEE-e-----------CCCCEEEEEEC---CCCeEEEEEecCCCccceEECCCCCEEEEEecCcC-C
Confidence 4578999999976554 1 22457999996 44444444444556678999999999988865211 2
Q ss_pred eEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECC
Q 002194 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN 560 (954)
Q Consensus 481 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 560 (954)
..|+++|+.++ +......... .... +.|+|||+++++... ....|++||++
T Consensus 224 ~~v~~~d~~~~--~~~~~~~~~~-~~~~------~~~s~dg~~l~~s~~--------------------~d~~v~v~d~~ 274 (391)
T 1l0q_A 224 NTVSMIDTGTN--KITARIPVGP-DPAG------IAVTPDGKKVYVALS--------------------FXNTVSVIDTA 274 (391)
T ss_dssp CEEEEEETTTT--EEEEEEECCS-SEEE------EEECTTSSEEEEEET--------------------TTTEEEEEETT
T ss_pred CcEEEEECCCC--eEEEEEecCC-CccE------EEEccCCCEEEEEcC--------------------CCCEEEEEECC
Confidence 56888888875 3333322221 1222 789999998876651 12359999999
Q ss_pred CCCeEEEeccCccccc-ceeEEeccCC---ccccccccC--C------EEEEEEecCCCCceEEEEECCCCceeEeecCC
Q 002194 561 TGSKERIWESDKEKYY-ETTVALMSDQ---TEGDLYLNQ--L------KILTSKESKTENTQYYIQSWPDKKSCQITDFP 628 (954)
Q Consensus 561 ~g~~~~l~~~~~~~~~-~~~~~~~~~~---~~~~~s~dg--~------~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt~~~ 628 (954)
+++...........+. .......... ....|+.+. . .+.+. +.......|+|+..+|.... ..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~--~~~~~~~~~~W~~~~g~~~~--~~- 349 (391)
T 1l0q_A 275 TNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFT--DLSKDATEWKWDFGDGSSSK--KQ- 349 (391)
T ss_dssp TTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEE--ECCBSCSEEEEECSSSCEEC--SS-
T ss_pred CCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEE--eCCCCceEEEEECCCCcccC--cC-
Confidence 9887655443321110 0000110000 011233322 1 13333 23334568899987776422 11
Q ss_pred CCCCCcC--CCceEEEEEEcCCC--eEEEEEEEcCCC
Q 002194 629 HPYPQLA--SLQKELIKYQRKDG--VQLSATLYLPPG 661 (954)
Q Consensus 629 ~~~~~~~--~~~~~~~~~~~~~g--~~l~~~l~~P~~ 661 (954)
.+...+. ..-...+++.+.+| .+++...+.+++
T Consensus 350 ~~~~~~~~~g~y~~~~~~~~~~g~~~~~~~~~v~~~~ 386 (391)
T 1l0q_A 350 NPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKG 386 (391)
T ss_dssp SCEECCSSCEEEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred CCeEEeCCCceEEEEEEEECCCCcEEEEEEEEEEcCC
Confidence 1211222 12245667778888 356666666543
No 99
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.76 E-value=3.7e-18 Score=185.45 Aligned_cols=226 Identities=16% Similarity=0.103 Sum_probs=154.4
Q ss_pred ceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH-HCCcEEE
Q 002194 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~ 716 (954)
..+.+++++.+| .+.+++| +. .++.|+||++|||.+..+. ...+ ..+...|+ ..||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVICS--------IESH----DALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTSCC--------TGGG----HHHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCcccccCC--------hhHh----HHHHHHHHHHhCCEEE
Confidence 478888988887 8999998 42 2348999999998543221 1111 23566677 5899999
Q ss_pred EcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhCCCc----ccEEEE
Q 002194 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIA 789 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~ 789 (954)
.+++ +|+|.+.. +....|+.++++|+.++ ..+|+++|+|+|+|+||++|+.++.+.+++ ++++|+
T Consensus 115 ~~dy---rg~g~~~~-----p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (311)
T 1jji_A 115 SVDY---RLAPEHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EEEC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred EecC---CCCCCCCC-----CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 9555 45555432 34567888999998875 247888999999999999999999887655 999999
Q ss_pred eccCCCCCCCCCCC---------cccc--chhhhc----H--HHHHhcCccc-ccCCCCCCEEEEEeCCCCCCCCchHHH
Q 002194 790 RSGAYNRTLTPFGF---------QNED--RTLWEA----T--STYVEMSPFM-SANKLKKPILLVHGEEDNNSGTLTMQS 851 (954)
Q Consensus 790 ~~~~~~~~~~~~~~---------~~~~--~~~~~~----~--~~~~~~sp~~-~~~~~~~P~Lii~G~~D~~v~~~~~~~ 851 (954)
++|..+.......+ .... ...|.. . ......+|+. .+..+ .|+||+||+.|..+ .++
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~----~~~ 261 (311)
T 1jji_A 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR----DEG 261 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH----HHH
T ss_pred eCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch----HHH
Confidence 99987743211000 0000 000000 0 0001123332 12222 59999999999874 567
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCCc----ccHHHHHHHHHHHHHH
Q 002194 852 DRFFNALKGHGALCRLVILPFESHGYAAR----ESIMHVLWETDRWLQK 896 (954)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~ 896 (954)
.+++++|+..|+++++++|++++|.+... +....+.+.+.+||++
T Consensus 262 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 262 EVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 88999999999999999999999987532 3456777888888864
No 100
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.76 E-value=3e-17 Score=169.73 Aligned_cols=198 Identities=13% Similarity=0.092 Sum_probs=143.0
Q ss_pred EEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCC--------------
Q 002194 656 LYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT-------------- 721 (954)
Q Consensus 656 l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~-------------- 721 (954)
++.|+. +.+.|+||++||+..... .| ......|+++||.|++++..
T Consensus 14 ~~~p~~-----~~~~~~vv~lHG~~~~~~-----------~~----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 73 (232)
T 1fj2_A 14 AIVPAA-----RKATAAVIFLHGLGDTGH-----------GW----AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73 (232)
T ss_dssp EEECCS-----SCCSEEEEEECCSSSCHH-----------HH----HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEEC
T ss_pred cccCCC-----CCCCceEEEEecCCCccc-----------hH----HHHHHHHhcCCcEEEecCCCcccccccccccccc
Confidence 456654 235799999999632100 01 12333445579999996332
Q ss_pred --CCCCCCCcc-cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC
Q 002194 722 --PIIGEGDEE-ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (954)
Q Consensus 722 --~~~G~G~~~-~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~ 798 (954)
+..|+.... ..........+|+.++++++.+ ..+|+++++++|||+||.+++.++.++|++++++|+++|..+...
T Consensus 74 w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp SSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 334441111 1223355677888888888887 557889999999999999999999999999999999998654211
Q ss_pred CCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCc--EEEEEeCCCCCc
Q 002194 799 TPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL--CRLVILPFESHG 876 (954)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~H~ 876 (954)
. + ......+.++++|+|++||++|..++ .+.++++++.++..+.+ ++++++++++|.
T Consensus 153 ~---~----------------~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~ 211 (232)
T 1fj2_A 153 S---F----------------PQGPIGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHS 211 (232)
T ss_dssp G---S----------------CSSCCCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSS
T ss_pred c---c----------------cccccccccCCCCEEEEecCCCccCC--HHHHHHHHHHHHHhCCCCceEEEEeCCCCcc
Confidence 0 0 00112345678999999999999998 89999999999988854 999999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHhccc
Q 002194 877 YAARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
+. .+..+.+.+||++++..
T Consensus 212 ~~-----~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 212 SC-----QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp CC-----HHHHHHHHHHHHHHSCC
T ss_pred cC-----HHHHHHHHHHHHHhcCC
Confidence 83 34458899999999853
No 101
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.76 E-value=8.6e-17 Score=196.65 Aligned_cols=330 Identities=11% Similarity=0.029 Sum_probs=198.5
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccC-CCCCCce
Q 002194 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFP-DGKLGQE 179 (954)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-~g~~~~~ 179 (954)
++.+++.....+ .++|||++++|...+ .+... ..||+.+... ++ +..
T Consensus 101 ~~~~~~~~~~~~--~p~pdG~~~~~~~~~----------------------~~~~~------~~l~~~~~~~~~~--~~~ 148 (741)
T 1yr2_A 101 RMKALIDYERFG--LPQRRGASVFYSWNS----------------------GLMNQ------SQLLVRPADAPVG--TKG 148 (741)
T ss_dssp HHHHHSCCCEEC--CCEEETTEEEEEEEC----------------------SSCSS------CEEEEEETTSCTT--CCC
T ss_pred HHHHhhcccccC--CCEEECCEEEEEEEc----------------------CCCeE------EEEEEEcCCccCC--CCC
Confidence 344555543433 346999999999875 11111 3678777531 02 344
Q ss_pred eeeec---CCCCC--cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecC
Q 002194 180 IEIQG---FPDGA--KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN 254 (954)
Q Consensus 180 ~~lt~---~~~~~--~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD 254 (954)
+.|.. ++.+. .+..++|||||++|||..+.. +++..+||++|+++|+..+.+..... +..++||||
T Consensus 149 ~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~----G~e~~~i~v~dl~tg~~~~~~~~~~~-----~~~~~wspD 219 (741)
T 1yr2_A 149 RVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG----GSDWRTVKFVGVADGKPLADELKWVK-----FSGLAWLGN 219 (741)
T ss_dssp EEEECGGGCC----EEEEEEEECTTSSEEEEEEEET----TCSEEEEEEEETTTCCEEEEEEEEEE-----SCCCEESTT
T ss_pred EEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC----CCceEEEEEEECCCCCCCCccCCCce-----eccEEEECC
Confidence 55421 12222 567899999999999998643 44457999999999987654221111 357999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--eeEcCCC
Q 002194 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP 331 (954)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--~~~l~~~ 331 (954)
+.|+|+....... +.. +... ....+||++++ ++. .+.+...
T Consensus 220 -~~l~~~~~~~~~~---------~~~------------------~~~~--------~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 220 -DALLYSRFAEPKE---------GQA------------------FQAL--------NYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp -SEEEEEECCCC-----------------------------------C--------CCCCEEEEEETTSCGGGCEEEECC
T ss_pred -CEEEEEEecCccc---------ccc------------------cccC--------CCCCEEEEEECCCCchhCEEEecc
Confidence 9999984322110 000 0000 02346889998 554 2334332
Q ss_pred ----ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCc--e-EEEeccCCCcccCCccccccccCccce
Q 002194 332 ----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--F-VRELCDLPLAEDIPIAFNSVRKGMRSI 404 (954)
Q Consensus 332 ----~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~--~-~~~l~~~~~~~~~p~~~~~~~~g~~~~ 404 (954)
..+.++.|||||++|++.+..... ...+++++|++++ + .+.|..... +...+
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~l~~~~~-------------~~~~~ 322 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTD--------PVNTVHVARVTNGKIGPVTALIPDLK-------------AQWDF 322 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTC--------SCCEEEEEEEETTEECCCEEEECSSS-------------SCEEE
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCC--------CcceEEEEECCCCCCcccEEecCCCC-------------ceEEE
Confidence 246789999999999998854311 1348999999876 5 566654321 11223
Q ss_pred eeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCC--CCceEEeec-ccccCceeeccCCceEEEEEeccccce
Q 002194 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG--EGPEILHKL-DLRYGGISWCDDSLALVYESWYKTRRT 481 (954)
Q Consensus 405 ~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g--~~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~ 481 (954)
++|||+.|++..+.. .....|+++++ ++ ++.+.+... +..+..++|+ +..|++....++ ..
T Consensus 323 -~~~dg~~l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg-~~ 386 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDG---------APLKKIVRVDL---SGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDA-KS 386 (741)
T ss_dssp -EEEETTEEEEEECTT---------CTTCEEEEEEC---SSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETT-EE
T ss_pred -EeccCCEEEEEECCC---------CCCCEEEEEeC---CCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECC-EE
Confidence 569999988874321 22568999996 44 244555433 2334456665 556777665554 37
Q ss_pred EEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCC
Q 002194 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (954)
Q Consensus 482 ~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 561 (954)
+||+++++++ ....+.-.....+.. ++++|||+.++|..... .....||+||+++
T Consensus 387 ~l~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~-----------------~~P~~i~~~d~~t 441 (741)
T 1yr2_A 387 QVLAFDLDGK--PAGAVSLPGIGSASG------LSGRPGDRHAYLSFSSF-----------------TQPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTSC--EEEECBCSSSCEEEE------EECCBTCSCEEEEEEET-----------------TEEEEEEEEETTT
T ss_pred EEEEEeCCCC--ceeeccCCCCeEEEE------eecCCCCCEEEEEEcCC-----------------CCCCEEEEEECCC
Confidence 8999998653 233332111122222 67889999888876322 1234599999999
Q ss_pred CCeEEEec
Q 002194 562 GSKERIWE 569 (954)
Q Consensus 562 g~~~~l~~ 569 (954)
++.+.+..
T Consensus 442 g~~~~l~~ 449 (741)
T 1yr2_A 442 AKTTPWEP 449 (741)
T ss_dssp TEEEECSC
T ss_pred CcEEEEec
Confidence 98766654
No 102
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.75 E-value=5.9e-18 Score=190.71 Aligned_cols=228 Identities=12% Similarity=0.061 Sum_probs=152.4
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
...+.++++. +|..++++++.|++ .++.|+||++||+.... ..........++++||.|+
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~~--------------~~~~~~~~~~l~~~G~~V~ 225 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSLQ--------------TDMWRLFRDHLAKHDIAML 225 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSCG--------------GGGHHHHHHTTGGGTCEEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCccH--------------HHHHHHHHHHHHhCCCEEE
Confidence 4577888886 88899999999975 23589999999963110 0011123456778999999
Q ss_pred EcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC
Q 002194 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (954)
. .+.+|+|.+...... .........+++++.+...+|+++|+|+|||+||++++.++..+|++++++|+++|+.+.
T Consensus 226 ~---~D~~G~G~s~~~~~~-~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~ 301 (415)
T 3mve_A 226 T---VDMPSVGYSSKYPLT-EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD 301 (415)
T ss_dssp E---ECCTTSGGGTTSCCC-SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH
T ss_pred E---ECCCCCCCCCCCCCC-CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc
Confidence 9 555667766432110 011122256778888887788999999999999999999999998999999999987541
Q ss_pred CCCCCC----Cccc---------cchhhhcH---HHHHhcCcccc----cCCCCCCEEEEEeCCCCCCCCchHHHHHHHH
Q 002194 797 TLTPFG----FQNE---------DRTLWEAT---STYVEMSPFMS----ANKLKKPILLVHGEEDNNSGTLTMQSDRFFN 856 (954)
Q Consensus 797 ~~~~~~----~~~~---------~~~~~~~~---~~~~~~sp~~~----~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~ 856 (954)
...... .... ........ ..+..+++... +.++++|+|++||++|.++| ..++..+++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~l~~ 379 (415)
T 3mve_A 302 IFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSP--YSDNQMVAF 379 (415)
T ss_dssp HHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSC--HHHHHHHHH
T ss_pred ccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCC--HHHHHHHHH
Confidence 110000 0000 00000000 11222333221 45788999999999999998 888777665
Q ss_pred HHHhCCCcEEEEEeCC-CCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 857 ALKGHGALCRLVILPF-ESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 857 ~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
.+.+++++++++ ..|. ........+.+||++++.
T Consensus 380 ----~~~~~~l~~i~g~~~h~-----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 ----FSTYGKAKKISSKTITQ-----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp ----TBTTCEEEEECCCSHHH-----HHHHHHHHHHHHHHHHHT
T ss_pred ----hCCCceEEEecCCCccc-----chHHHHHHHHHHHHHHhc
Confidence 456679999998 2232 456778899999999874
No 103
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.75 E-value=5.1e-16 Score=169.36 Aligned_cols=268 Identities=13% Similarity=0.141 Sum_probs=175.7
Q ss_pred CCCCceecCC----CCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecC
Q 002194 110 PLPALSFSPQ----RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (954)
Q Consensus 110 ~~~~~~~SPD----G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~ 185 (954)
.+..++|||+ |+.|+..+.+ ..|.||++.. +.......+.+
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D---------------------------------~~v~vW~~~~-~~~~~~~~l~g- 78 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLD---------------------------------DLVKVWKWRD-ERLDLQWSLEG- 78 (321)
T ss_dssp CEEEEEEC-------CEEEEEETT---------------------------------SCEEEEEEET-TEEEEEEEECC-
T ss_pred cEEEEEEecCCCCCCCEEEEEcCC---------------------------------CCEEEEECCC-CCeeeeeeecc-
Confidence 5678899885 5678877765 5788999853 11001112333
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCC
Q 002194 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (954)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (954)
+...+..+.|+|+++.++..+ ....|.++|+.+++........... +..++|+|||+.|+...
T Consensus 79 -h~~~v~~~~~~~~~~~l~s~s---------~D~~i~lWd~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~g~--- 141 (321)
T 3ow8_A 79 -HQLGVVSVDISHTLPIAASSS---------LDAHIRLWDLENGKQIKSIDAGPVD----AWTLAFSPDSQYLATGT--- 141 (321)
T ss_dssp -CSSCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCTTC----CCCEEECTTSSEEEEEC---
T ss_pred -CCCCEEEEEECCCCCEEEEEe---------CCCcEEEEECCCCCEEEEEeCCCcc----EEEEEECCCCCEEEEEc---
Confidence 223688899999999888754 2567888898887664443322222 55799999999998761
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccccccCCC
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPD 342 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~SpD 342 (954)
....+.++++ +++ ...+... ..+..++||||
T Consensus 142 ----------------------------------------------~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 142 ----------------------------------------------HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPD 175 (321)
T ss_dssp ----------------------------------------------TTSEEEEEETTTCSEEEEEECSSSCEEEEEECTT
T ss_pred ----------------------------------------------CCCcEEEEEcCCCceeEEecCCCceEEEEEECCC
Confidence 1234667777 553 3333333 56788999999
Q ss_pred CcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002194 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 343 Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~ 421 (954)
|++|+..+.+ +.|.+||+.+++. ..+..+ ...+..++|+|||+.|+..
T Consensus 176 g~~lasg~~d-------------g~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spd~~~l~s~----- 224 (321)
T 3ow8_A 176 GKYLASGAID-------------GIINIFDIATGKLLHTLEGH-------------AMPIRSLTFSPDSQLLVTA----- 224 (321)
T ss_dssp SSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCCCEEEECTTSCEEEEE-----
T ss_pred CCEEEEEcCC-------------CeEEEEECCCCcEEEEEccc-------------CCceeEEEEcCCCCEEEEE-----
Confidence 9999988743 3899999986654 333322 1345789999999976655
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 501 (954)
+..+.|.+|++ ..+.....+..+...+..++|+|||+.|+..+.++. |.++|+.++ +.......
T Consensus 225 --------s~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~----v~iwd~~~~--~~~~~~~~ 288 (321)
T 3ow8_A 225 --------SDDGYIKIYDV--QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS----VKVWDVGTR--TCVHTFFD 288 (321)
T ss_dssp --------CTTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC----EEEEETTTT--EEEEEECC
T ss_pred --------cCCCeEEEEEC--CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc----EEEEeCCCC--EEEEEEcC
Confidence 44567899996 233334455666677888999999999888765543 444455553 33333333
Q ss_pred CCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 502 SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
+...+.. ++|+|||++|+...
T Consensus 289 h~~~v~~------v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 289 HQDQVWG------VKYNGNGSKIVSVG 309 (321)
T ss_dssp CSSCEEE------EEECTTSSEEEEEE
T ss_pred CCCcEEE------EEECCCCCEEEEEe
Confidence 4444444 88999999988765
No 104
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.74 E-value=4.4e-17 Score=170.25 Aligned_cols=203 Identities=15% Similarity=0.075 Sum_probs=144.9
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---h-hHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---R-FVEQLVACAEA 745 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~-~~~~~~~D~~~ 745 (954)
.|+||++||..... ..| ...+..|+++||.|++ .+..|+|.+.... . ......+|+.+
T Consensus 22 ~~~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 22 DTGVVLLHAYTGSP-----------NDM----NFMARALQRSGYGVYV---PLFSGHGTVEPLDILTKGNPDIWWAESSA 83 (251)
T ss_dssp SEEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---CCCTTCSSSCTHHHHHHCCHHHHHHHHHH
T ss_pred CceEEEeCCCCCCH-----------HHH----HHHHHHHHHCCCEEEe---cCCCCCCCCChhhhcCcccHHHHHHHHHH
Confidence 68899999963211 111 3467778889999999 6667788774321 2 34566889999
Q ss_pred HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccc-------------cch---
Q 002194 746 AVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-------------DRT--- 809 (954)
Q Consensus 746 av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~-------------~~~--- 809 (954)
+++++.++ .++++++|||+||.+++.++.++|++++++++.+|.............. ...
T Consensus 84 ~i~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 3dkr_A 84 AVAHMTAK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQIL 159 (251)
T ss_dssp HHHHHHTT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHH
Confidence 99999876 5699999999999999999999999999999998876532110000000 000
Q ss_pred --hhhcHHHHHhc--CcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHH
Q 002194 810 --LWEATSTYVEM--SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMH 885 (954)
Q Consensus 810 --~~~~~~~~~~~--sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 885 (954)
.......+... .....+.++++|+|++||++|..+| +..+.++++.+... .+++++++++++|.+....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~ 236 (251)
T 3dkr_A 160 AYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVD--GRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHA 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBC--TTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHH
T ss_pred hhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccC--hHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhH
Confidence 00000000000 1234567789999999999999998 89999999988764 56899999999999865555888
Q ss_pred HHHHHHHHHHHh
Q 002194 886 VLWETDRWLQKY 897 (954)
Q Consensus 886 ~~~~i~~fl~~~ 897 (954)
+.+.+.+||+++
T Consensus 237 ~~~~i~~fl~~~ 248 (251)
T 3dkr_A 237 LEEDVIAFMQQE 248 (251)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 105
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.74 E-value=5.5e-16 Score=185.23 Aligned_cols=408 Identities=10% Similarity=0.058 Sum_probs=213.8
Q ss_pred CCCCceecCCCCEEEEEecCCC-----------CCccccccccceeeeeeecCCCCC-CcceeeEeceEEEEccCCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRAL-----------PPLEELARPEEKLAGLRIDGKCNT-RSRMSFYTGIGIHQLFPDGKLG 177 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~~~~~g~~~ 177 (954)
.+..++|||||++||....+.. ..+..+..+...+..+.+++++.. ....+.+..|.+|+... +
T Consensus 105 ~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~----~ 180 (611)
T 1nr0_A 105 PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP----F 180 (611)
T ss_dssp CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT----B
T ss_pred ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC----C
Confidence 5678999999999998765311 112233444555667778877643 34444457899999743 2
Q ss_pred c-eeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCC---CccccccccceeEec
Q 002194 178 Q-EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSP---DIYLNAIFDNFVWVN 253 (954)
Q Consensus 178 ~-~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~---~~~~~~~~~~~~wsp 253 (954)
+ ...+.+ +...+..++|||||+.|+... ....|.++|+.+++........ .......+..++|+|
T Consensus 181 ~~~~~l~~--H~~~V~~v~fspdg~~las~s---------~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 181 KFKSTFGE--HTKFVHSVRYNPDGSLFASTG---------GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp EEEEEECC--CSSCEEEEEECTTSSEEEEEE---------TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred eEeeeecc--ccCceEEEEECCCCCEEEEEE---------CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC
Confidence 2 223333 224688999999999988765 2456777788777654433110 001122377899999
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh-hccCcccc-ccccccccceEEEEEe-CCcee-EcC
Q 002194 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD-LLKDEYDE-DLFDYYATTQLVLVSL-DGTVK-EIG 329 (954)
Q Consensus 254 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d-~l~~~~d~-~~~~~~~~~~l~~~~~-~G~~~-~l~ 329 (954)
||+.|+....+..-.... ...+.....-... ....+ .+....++ ..+.......+..++. ++... .+.
T Consensus 250 dg~~l~s~s~D~~v~lWd---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~ 321 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWN---VATLKVEKTIPVG-----TRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY 321 (611)
T ss_dssp TSSEEEEEETTSEEEEEE---TTTTEEEEEEECC-----SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEe---CCCCceeeeecCC-----CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc
Confidence 999998774322111000 0000000000000 00000 00000000 0111112334556666 55433 233
Q ss_pred CC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEecc--CCCc--------cc---------
Q 002194 330 PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD--LPLA--------ED--------- 389 (954)
Q Consensus 330 ~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~--~~~~--------~~--------- 389 (954)
.. ..+..++|||||++|+..+.+. .+.+||+.+++...+.. +... ..
T Consensus 322 gh~~~v~~l~~spdg~~l~s~s~D~-------------~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~ 388 (611)
T 1nr0_A 322 GHNKAITALSSSADGKTLFSADAEG-------------HINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDD 388 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTT
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCC-------------cEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCC
Confidence 33 6788999999999999887443 67778776543322210 0000 00
Q ss_pred ------------------------CCc--cc--c-----------------------ccccCccceeeccCCCCceEEEE
Q 002194 390 ------------------------IPI--AF--N-----------------------SVRKGMRSINWRSDKPSTLYWAE 418 (954)
Q Consensus 390 ------------------------~p~--~~--~-----------------------~~~~g~~~~~wspDg~~i~~~~~ 418 (954)
.+. .+ + .....+..++|||||+.++..
T Consensus 389 ~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasg-- 466 (611)
T 1nr0_A 389 HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG-- 466 (611)
T ss_dssp EEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE--
T ss_pred ceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEe--
Confidence 000 00 0 000112345666666654443
Q ss_pred eccCCCccccccCCCeEEEEecCCCCCCCceEE--eecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcE
Q 002194 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL--HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (954)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l--~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (954)
+..+.|.+|++ .++....+ ..+...+..++|||||+.|+..+.+.. .+||.+... + +..
T Consensus 467 -----------s~D~~v~lwd~---~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~--v~~w~~~~~-~--~~~ 527 (611)
T 1nr0_A 467 -----------GQDSKVHVYKL---SGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRK--VIPYSVANN-F--ELA 527 (611)
T ss_dssp -----------ETTSEEEEEEE---ETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSC--EEEEEGGGT-T--EES
T ss_pred -----------CCCCeEEEEEc---cCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCC--EEEEEcCCC-C--cee
Confidence 34567888886 44433222 345667888999999999988765543 556654421 1 110
Q ss_pred E--EecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeE--EEeccCc
Q 002194 497 I--LFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE--RIWESDK 572 (954)
Q Consensus 497 ~--l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~--~l~~~~~ 572 (954)
. +...+...+.. ++|||||++|+.... ...+++||++++... .+.....
T Consensus 528 ~~~~~~~H~~~V~~------v~fspdg~~lasgs~---------------------D~~v~lW~~~~~~~~~~~~~~~h~ 580 (611)
T 1nr0_A 528 HTNSWTFHTAKVAC------VSWSPDNVRLATGSL---------------------DNSVIVWNMNKPSDHPIIIKGAHA 580 (611)
T ss_dssp CCCCCCCCSSCEEE------EEECTTSSEEEEEET---------------------TSCEEEEETTCTTSCCEEETTSST
T ss_pred eeeeeeecccceeE------EEECCCCCEEEEEEC---------------------CCcEEEEECCCcccccchhhccCc
Confidence 0 11112233333 899999999988762 124999999876532 2211110
Q ss_pred ccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002194 573 EKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (954)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~ 616 (954)
. ..+.. .+|+||+. ++ +... -..+.+|++
T Consensus 581 ~---~~v~~-------v~fs~d~~-l~-s~~~---D~~i~lW~~ 609 (611)
T 1nr0_A 581 M---SSVNS-------VIWLNETT-IV-SAGQ---DSNIKFWNV 609 (611)
T ss_dssp T---SCEEE-------EEEEETTE-EE-EEET---TSCEEEEEC
T ss_pred c---cCeeE-------EEEcCCCE-EE-EecC---CCCEEEEec
Confidence 0 01222 46899986 43 3332 234777765
No 106
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.74 E-value=1.1e-15 Score=182.64 Aligned_cols=329 Identities=11% Similarity=0.067 Sum_probs=198.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
....++|||||++||+.... .+.+|++.. + ...+.++++. .
T Consensus 20 ~~~~~~~spdg~~l~~~~~~----------------------------------~v~l~~~~~-~--~~~~~~~~h~--~ 60 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNGT----------------------------------SVYTVPVGS-L--TDTEIYTEHS--H 60 (611)
T ss_dssp CCCCCEECTTSSEEEEEETT----------------------------------EEEEEETTC-S--SCCEEECCCS--S
T ss_pred ceeEEeeCCCCCEEEeCCCC----------------------------------EEEEecCCC-c--ccCeEecCCC--C
Confidence 45678999999999998753 789999853 2 2334454433 4
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCcee---ecccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
.+...+|||||++||.... ...|.++|+.+++.. .+..... .+..++|+|||+.|+.+.....
T Consensus 61 ~v~~~~~spdg~~lasg~~---------d~~v~lWd~~~~~~~~~~~~~~~~~-----~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDV---------HGNVRIWDTTQTTHILKTTIPVFSG-----PVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSEEEEEESSSTTCCEEEEEECSSS-----CEEEEEECTTSCEEEEEECCSS
T ss_pred ceEEEEECCCCcEEEEEeC---------CCCEEEeECCCCcceeeEeecccCC-----ceEEEEECCCCCEEEEEECCCC
Confidence 6889999999999998652 456777787654322 1211222 2778999999999987621000
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCCC-ccccccccCCCCcE
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKY 345 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~ 345 (954)
....|+.++.......+... ..+..++|+|||+.
T Consensus 127 ---------------------------------------------~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~ 161 (611)
T 1nr0_A 127 ---------------------------------------------RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPF 161 (611)
T ss_dssp ---------------------------------------------CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSC
T ss_pred ---------------------------------------------ceeEEEEeeCCCCcceecCCCCCceEEEECCCCCe
Confidence 11235555532223334444 67889999999985
Q ss_pred -EEEEeecCCcccccccCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002194 346 -ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (954)
Q Consensus 346 -l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~ 423 (954)
|+..+.+ +.+.+||....+.. .+.. +...+..++|+|||+.++..
T Consensus 162 ~l~s~s~D-------------~~v~lwd~~~~~~~~~l~~-------------H~~~V~~v~fspdg~~las~------- 208 (611)
T 1nr0_A 162 RIISGSDD-------------NTVAIFEGPPFKFKSTFGE-------------HTKFVHSVRYNPDGSLFAST------- 208 (611)
T ss_dssp EEEEEETT-------------SCEEEEETTTBEEEEEECC-------------CSSCEEEEEECTTSSEEEEE-------
T ss_pred EEEEEeCC-------------CeEEEEECCCCeEeeeecc-------------ccCceEEEEECCCCCEEEEE-------
Confidence 5555532 38999998765432 2322 22456789999999966554
Q ss_pred CccccccCCCeEEEEecCCCCCCCceEEe-------ecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcE
Q 002194 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILH-------KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (954)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-------~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (954)
+..+.|.+|++ .++.....+. .+...+..++|+|||+.|+..+.++. |.++|+.++ +..
T Consensus 209 ------s~D~~i~lwd~--~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~----v~lWd~~~~--~~~ 274 (611)
T 1nr0_A 209 ------GGDGTIVLYNG--VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT----IKIWNVATL--KVE 274 (611)
T ss_dssp ------ETTSCEEEEET--TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE----EEEEETTTT--EEE
T ss_pred ------ECCCcEEEEEC--CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe----EEEEeCCCC--cee
Confidence 34567889985 2333333332 35567788999999999988765543 444455554 212
Q ss_pred EEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccccc
Q 002194 497 ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYY 576 (954)
Q Consensus 497 ~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 576 (954)
........ ... .......+++.++.... ...+.+||..+++..+.......
T Consensus 275 ~~~~~~~~-~~~----~~~~~~~~~~~l~s~s~---------------------d~~i~~~~~~~~~~~~~~~gh~~--- 325 (611)
T 1nr0_A 275 KTIPVGTR-IED----QQLGIIWTKQALVSISA---------------------NGFINFVNPELGSIDQVRYGHNK--- 325 (611)
T ss_dssp EEEECCSS-GGG----CEEEEEECSSCEEEEET---------------------TCCEEEEETTTTEEEEEECCCSS---
T ss_pred eeecCCCC-ccc----eeEEEEEcCCEEEEEeC---------------------CCcEEEEeCCCCCcceEEcCCCC---
Confidence 21111100 000 00122235665555441 12488999988765444322211
Q ss_pred ceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEe
Q 002194 577 ETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (954)
Q Consensus 577 ~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~L 624 (954)
.+.. .+|+|||+.++..... ..+.+|++.+++...+
T Consensus 326 -~v~~-------l~~spdg~~l~s~s~D----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 326 -AITA-------LSSSADGKTLFSADAE----GHINSWDISTGISNRV 361 (611)
T ss_dssp -CEEE-------EEECTTSSEEEEEETT----SCEEEEETTTCCEEEC
T ss_pred -CEEE-------EEEeCCCCEEEEEeCC----CcEEEEECCCCceeee
Confidence 1222 4689999987644433 4699999988865443
No 107
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.74 E-value=1.8e-16 Score=163.32 Aligned_cols=185 Identities=14% Similarity=0.154 Sum_probs=137.9
Q ss_pred CCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH--CCcEEEEcCCC----------------CCCCCCCc
Q 002194 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPTT----------------PIIGEGDE 729 (954)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~V~~~~~~----------------~~~G~G~~ 729 (954)
.+.|+||++||+.... ..| ......|++ +||.|+.++.. +..|+|.+
T Consensus 22 ~~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 86 (226)
T 3cn9_A 22 NADACIIWLHGLGADR-----------TDF----KPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA 86 (226)
T ss_dssp TCCEEEEEECCTTCCG-----------GGG----HHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST
T ss_pred CCCCEEEEEecCCCCh-----------HHH----HHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc
Confidence 3589999999964211 011 245667777 99999996543 34456543
Q ss_pred ccc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH-hCCCcccEEEEeccCCCCCCCCCCCcccc
Q 002194 730 EAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA-HAPHLFCCGIARSGAYNRTLTPFGFQNED 807 (954)
Q Consensus 730 ~~~-~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~~~~~~~~~~~~~~~~~ 807 (954)
... ........+|+..+++.+.+ ..+++++++++|||+||.+++.++. ++|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~-------- 157 (226)
T 3cn9_A 87 RAIDEDQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD-------- 157 (226)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG--------
T ss_pred ccccchhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh--------
Confidence 222 23345567777777777766 3477889999999999999999999 999999999999986432100
Q ss_pred chhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHH
Q 002194 808 RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVL 887 (954)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 887 (954)
+ .. ...++++|+|+++|++|..+| ++.++++++.++..|.++++++++ ++|.+. .+..
T Consensus 158 ---~-------~~----~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~ 215 (226)
T 3cn9_A 158 ---L-------AL----DERHKRIPVLHLHGSQDDVVD--PALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEI 215 (226)
T ss_dssp ---C-------CC----CTGGGGCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHH
T ss_pred ---h-------hh----cccccCCCEEEEecCCCCccC--HHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhH
Confidence 0 01 114567899999999999998 999999999999998899999999 999874 3446
Q ss_pred HHHHHHHHHhc
Q 002194 888 WETDRWLQKYC 898 (954)
Q Consensus 888 ~~i~~fl~~~l 898 (954)
+.+.+||+++|
T Consensus 216 ~~i~~~l~~~l 226 (226)
T 3cn9_A 216 HDIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 78999998874
No 108
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.74 E-value=2.1e-17 Score=179.01 Aligned_cols=228 Identities=16% Similarity=0.147 Sum_probs=148.3
Q ss_pred eEEEEEE---cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEE
Q 002194 639 KELIKYQ---RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (954)
Q Consensus 639 ~~~~~~~---~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (954)
...++|. ..+|..+.+++|.|++.. .+.|+||++||+..... .+.......++++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~----~~~p~vv~lHG~~~~~~--------------~~~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYT----PDRPVVVVQHGVLRNGA--------------DYRDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCC----TTSCEEEEECCTTCCHH--------------HHHHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCC----CCCcEEEEeCCCCCCHH--------------HHHHHHHHHHHHCCcEE
Confidence 3456666 678899999999998642 24799999999742211 01012355677899999
Q ss_pred EEcCCCCC---------CCC--CCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-c
Q 002194 716 LGGPTTPI---------IGE--GDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-L 783 (954)
Q Consensus 716 ~~~~~~~~---------~G~--G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~ 783 (954)
+.++++.. .|+ |.+..........+.|+.++++++.++..+|+++|+|+|||+||.+++.++.++|+ +
T Consensus 86 ~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 86 VAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp EEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred EEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 99777632 033 33322211222345678899999998877899999999999999999999999985 7
Q ss_pred ccEEEEec-cCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCC--Cc-------------
Q 002194 784 FCCGIARS-GAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSG--TL------------- 847 (954)
Q Consensus 784 ~~a~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~--~~------------- 847 (954)
++++|+.+ |.++.......+...... ...+|......+++|+|++||++|.++. .+
T Consensus 166 ~~~~vl~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~ 237 (304)
T 3d0k_A 166 FHAVTAANPGWYTLPTFEHRFPEGLDG--------VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHR 237 (304)
T ss_dssp CSEEEEESCSSCCCSSTTSBTTTSSBT--------TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSH
T ss_pred eEEEEEecCcccccCCccccCccccCC--------CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccH
Confidence 88888655 554432111000000000 0112322233446899999999998741 00
Q ss_pred hHHHHHHHHHHH----hCCCc--EEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 848 TMQSDRFFNALK----GHGAL--CRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 848 ~~~~~~~~~~l~----~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
...+.++++.++ ..|++ ++++++|+++|.+ ......+.+||....
T Consensus 238 ~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~------~~~~~~~~~~~~~~~ 288 (304)
T 3d0k_A 238 YARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDG------QAMSQVCASLWFDGR 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCH------HHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCch------HHHHHHHHHHHhhhh
Confidence 245667777776 56766 9999999999987 244567778876543
No 109
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.74 E-value=1.3e-16 Score=164.41 Aligned_cols=181 Identities=15% Similarity=0.112 Sum_probs=135.6
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCccc---------chhhHHHH
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---------NDRFVEQL 739 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~---------~~~~~~~~ 739 (954)
+.|+||++||+... ...| ......|+. ||.|+.+++ +..|+|.+.. ........
T Consensus 37 ~~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~-g~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 99 (226)
T 2h1i_A 37 SKPVLLLLHGTGGN-----------ELDL----LPLAEIVDS-EASVLSVRG-NVLENGMPRFFRRLAEGIFDEEDLIFR 99 (226)
T ss_dssp TSCEEEEECCTTCC-----------TTTT----HHHHHHHHT-TSCEEEECC-SEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCcEEEEEecCCCC-----------hhHH----HHHHHHhcc-CceEEEecC-cccCCcchhhccccCccCcChhhHHHH
Confidence 47999999996411 1112 234555555 999999532 4556665421 11223344
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHh
Q 002194 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVE 819 (954)
Q Consensus 740 ~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (954)
+.++.+.++++.++..+++++++++|||+||.+++.++.++|++++++|+++|......
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------- 158 (226)
T 2h1i_A 100 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------
T ss_pred HHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------
Confidence 66677777777777777889999999999999999999999999999999998754211
Q ss_pred cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 820 ~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
......+++|+|+++|+.|..++ ...++++++.++..+.++++ ++++++|.+. .+..+.+.+||.++|
T Consensus 159 ---~~~~~~~~~p~l~~~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 ---MQLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ---CCCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred ---cccccccCCcEEEEeCCCCCcCC--HHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 11123347899999999999998 89999999999998888998 9999999984 455788999998864
No 110
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.73 E-value=1.3e-16 Score=165.93 Aligned_cols=189 Identities=14% Similarity=0.126 Sum_probs=132.6
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC-----CcEEEEcCC----------------CCCCCCC
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-----GFAILGGPT----------------TPIIGEG 727 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-----G~~V~~~~~----------------~~~~G~G 727 (954)
+.|+||++||...... .| ..+...|+.+ ||.|+.++. ++..|.+
T Consensus 22 ~~p~vv~lHG~g~~~~-----------~~----~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 86 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQ-----------GL----RMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKIT 86 (239)
T ss_dssp CCEEEEEECCTTCCHH-----------HH----HHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSS
T ss_pred CCcEEEEEecCCCchh-----------hH----HHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCC
Confidence 4799999999531100 01 1244555554 688888554 1222222
Q ss_pred Cccc-chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccc
Q 002194 728 DEEA-NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE 806 (954)
Q Consensus 728 ~~~~-~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~ 806 (954)
.... .........+++...++.+.+ ..+|.++++|+|||+||++|+.++.++|++++++|+++|..+...
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------- 157 (239)
T 3u0v_A 87 NDCPEHLESIDVMCQVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKAS-------- 157 (239)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTC--------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchh--------
Confidence 2211 112334455666666666554 347889999999999999999999999999999999998754211
Q ss_pred cchhhhcHHHHHhcCcccccCCCCCC-EEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHH
Q 002194 807 DRTLWEATSTYVEMSPFMSANKLKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMH 885 (954)
Q Consensus 807 ~~~~~~~~~~~~~~sp~~~~~~~~~P-~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 885 (954)
.... .+. .....+| +|++||++|..+| +++++++++.|+..+.+++++++++++|.+. .+
T Consensus 158 --~~~~---~~~-------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~ 218 (239)
T 3u0v_A 158 --AVYQ---ALQ-------KSNGVLPELFQCHGTADELVL--HSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KT 218 (239)
T ss_dssp --HHHH---HHH-------HCCSCCCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HH
T ss_pred --HHHH---HHH-------hhccCCCCEEEEeeCCCCccC--HHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HH
Confidence 0000 000 1234566 9999999999999 9999999999999999999999999999985 45
Q ss_pred HHHHHHHHHHHhccc
Q 002194 886 VLWETDRWLQKYCVS 900 (954)
Q Consensus 886 ~~~~i~~fl~~~l~~ 900 (954)
..+.+.+||.+++..
T Consensus 219 ~~~~~~~~l~~~l~~ 233 (239)
T 3u0v_A 219 ELDILKLWILTKLPG 233 (239)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhCCC
Confidence 678899999999854
No 111
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.73 E-value=5.4e-17 Score=177.53 Aligned_cols=216 Identities=8% Similarity=0.018 Sum_probs=146.4
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH-HCCcEEEEcCCCCCCCCCCcc
Q 002194 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEE 730 (954)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~~~G~G~~~ 730 (954)
+.++++.|.+ ++.|+||++|||++..+.. .. ...+...|+ +.||.|+.+++++.. .
T Consensus 84 ~~~~~~~p~~------~~~p~vv~lHGgg~~~~~~--------~~----~~~~~~~la~~~g~~vi~~D~r~~~---~-- 140 (326)
T 3d7r_A 84 MQVFRFNFRH------QIDKKILYIHGGFNALQPS--------PF----HWRLLDKITLSTLYEVVLPIYPKTP---E-- 140 (326)
T ss_dssp EEEEEEESTT------CCSSEEEEECCSTTTSCCC--------HH----HHHHHHHHHHHHCSEEEEECCCCTT---T--
T ss_pred EEEEEEeeCC------CCCeEEEEECCCcccCCCC--------HH----HHHHHHHHHHHhCCEEEEEeCCCCC---C--
Confidence 5667788864 2369999999985322110 00 112345566 469999997765432 1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc----ccEEEEeccCCCCCCCCCCCc-c
Q 002194 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQ-N 805 (954)
Q Consensus 731 ~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~~~~~~~~~~~-~ 805 (954)
......++|+.++++++.++ +++++++|+||||||.+|+.++.+.|++ ++++|+++|.++......... .
T Consensus 141 ---~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 215 (326)
T 3d7r_A 141 ---FHIDDTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA 215 (326)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH
T ss_pred ---CCchHHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh
Confidence 12356789999999999887 6788999999999999999999887666 999999999876543211111 0
Q ss_pred c-cchhh-------hcHHHHH--------hcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEE
Q 002194 806 E-DRTLW-------EATSTYV--------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (954)
Q Consensus 806 ~-~~~~~-------~~~~~~~--------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (954)
. ....+ .....|. ..+|+...-+.-+|+||+||++|.. ..++.++.++++..+.++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~----~~~~~~~~~~l~~~~~~~~~~~ 291 (326)
T 3d7r_A 216 LIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMT----HPDMKLFEQMMLQHHQYIEFYD 291 (326)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccc----hHHHHHHHHHHHHCCCcEEEEE
Confidence 0 00000 0001111 1123221111225999999999963 5678889999999999999999
Q ss_pred eCCCCCcCCC--cccHHHHHHHHHHHHHHhcc
Q 002194 870 LPFESHGYAA--RESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 870 ~~~~~H~~~~--~~~~~~~~~~i~~fl~~~l~ 899 (954)
+|+++|.+.. .+....+.+.+.+||++++.
T Consensus 292 ~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 292 YPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp ETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred eCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 9999998753 25567888999999987763
No 112
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.73 E-value=6.2e-18 Score=180.01 Aligned_cols=200 Identities=13% Similarity=0.117 Sum_probs=135.9
Q ss_pred CCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHH----HHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHH
Q 002194 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW----LARGFAILGGPTTPIIGEGDEEANDRFVEQLVACA 743 (954)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----a~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~ 743 (954)
++.|+||++|||++..+.. +... ....+..| +++||.|+.+++++. +.. .....++|+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~------~~~~----~~~~~~~L~~~a~~~g~~vi~~d~r~~---~~~-----~~~~~~~d~ 100 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPEN------TPND----FNQLANTIKSMDTESTVCQYSIEYRLS---PEI-----TNPRNLYDA 100 (273)
T ss_dssp TCCEEEEEECCSTTTCTTC------CGGG----GHHHHHHHHHHCTTCCEEEEEECCCCT---TTS-----CTTHHHHHH
T ss_pred CCCeEEEEECCCcccCCcC------ChHH----HHHHHHHHhhhhccCCcEEEEeecccC---CCC-----CCCcHHHHH
Confidence 3589999999975432110 0001 12345556 479999999776432 221 123567899
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-----------------CCcccEEEEeccCCCCCCCCCCCcc-
Q 002194 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-----------------PHLFCCGIARSGAYNRTLTPFGFQN- 805 (954)
Q Consensus 744 ~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----------------p~~~~a~v~~~~~~~~~~~~~~~~~- 805 (954)
.++++++.++ ++.++++|+||||||.+|+.++.+. |++++++|+++|+++..........
T Consensus 101 ~~~~~~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 178 (273)
T 1vkh_A 101 VSNITRLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEY 178 (273)
T ss_dssp HHHHHHHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGG
T ss_pred HHHHHHHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccH
Confidence 9999999887 5678999999999999999999885 6889999999987652110000000
Q ss_pred ---------ccchhhh-cHHHHHhcCccc--ccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002194 806 ---------EDRTLWE-ATSTYVEMSPFM--SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (954)
Q Consensus 806 ---------~~~~~~~-~~~~~~~~sp~~--~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 873 (954)
.....|. .. ...++.. ...++++|+||+||++|..|| ++++++++++++..+.++++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~ 253 (273)
T 1vkh_A 179 DCFTRLAFPDGIQMYEEEP---SRVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLG 253 (273)
T ss_dssp HHHHHHHCTTCGGGCCCCH---HHHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHhcccccchhhcc---cccChhhhhcccccCCCEEEEecCCcCCCC--hHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 0000011 00 0111110 112267899999999999998 99999999999999999999999999
Q ss_pred CCcCCCcccHHHHHHHHHHHH
Q 002194 874 SHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 874 ~H~~~~~~~~~~~~~~i~~fl 894 (954)
+|.+. .+. .++.+.|.+||
T Consensus 254 gH~~~-~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 254 LHNDV-YKN-GKVAKYIFDNI 272 (273)
T ss_dssp SGGGG-GGC-HHHHHHHHHTC
T ss_pred ccccc-ccC-hHHHHHHHHHc
Confidence 99974 333 67777777775
No 113
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.72 E-value=2.6e-16 Score=159.36 Aligned_cols=197 Identities=15% Similarity=0.119 Sum_probs=139.0
Q ss_pred eEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccH--HHHHHHHCCcEEE
Q 002194 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGST--SVLLWLARGFAIL 716 (954)
Q Consensus 639 ~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~la~~G~~V~ 716 (954)
.+...+. .+|.++++++|.|.+ +.|+||++||+.... ..| .. ....|+++||.|+
T Consensus 4 ~~~~~~~-~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~~-----------~~~----~~~~~~~~l~~~G~~v~ 60 (207)
T 3bdi_A 4 LQEEFID-VNGTRVFQRKMVTDS-------NRRSIALFHGYSFTS-----------MDW----DKADLFNNYSKIGYNVY 60 (207)
T ss_dssp CEEEEEE-ETTEEEEEEEECCTT-------CCEEEEEECCTTCCG-----------GGG----GGGTHHHHHHTTTEEEE
T ss_pred ceeEEEe-eCCcEEEEEEEeccC-------CCCeEEEECCCCCCc-----------ccc----chHHHHHHHHhCCCeEE
Confidence 3444444 489999999999864 268999999974211 111 23 5678889999999
Q ss_pred EcCCCCCCCCCCc---ccchhhHHH-HHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEecc
Q 002194 717 GGPTTPIIGEGDE---EANDRFVEQ-LVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (954)
Q Consensus 717 ~~~~~~~~G~G~~---~~~~~~~~~-~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (954)
.+ +..|+|.+ ..... .. ..+++.+.+..+.+. .+.++++++|||+||.+++.++.++|++++++|+++|
T Consensus 61 ~~---d~~g~g~s~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~ 133 (207)
T 3bdi_A 61 AP---DYPGFGRSASSEKYGI--DRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAP 133 (207)
T ss_dssp EE---CCTTSTTSCCCTTTCC--TTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred EE---cCCcccccCcccCCCC--CcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCC
Confidence 94 44566666 33211 11 233444444444443 2446999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC
Q 002194 793 AYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (954)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 872 (954)
.... . + ...+.++++|+|+++|++|..++ ....+++++.+. +++++++++
T Consensus 134 ~~~~---~--~-------------------~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~ 183 (207)
T 3bdi_A 134 AWVE---S--L-------------------KGDMKKIRQKTLLVWGSKDHVVP--IALSKEYASIIS----GSRLEIVEG 183 (207)
T ss_dssp CSCG---G--G-------------------HHHHTTCCSCEEEEEETTCTTTT--HHHHHHHHHHST----TCEEEEETT
T ss_pred cccc---c--h-------------------hHHHhhccCCEEEEEECCCCccc--hHHHHHHHHhcC----CceEEEeCC
Confidence 5210 0 0 12345678999999999999998 888888887763 458999999
Q ss_pred CCCcCCCcccHHHHHHHHHHHHHH
Q 002194 873 ESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 873 ~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
++|.+. .+....+.+.+.+||++
T Consensus 184 ~~H~~~-~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 184 SGHPVY-IEKPEEFVRITVDFLRN 206 (207)
T ss_dssp CCSCHH-HHSHHHHHHHHHHHHHT
T ss_pred CCCCcc-ccCHHHHHHHHHHHHhh
Confidence 999863 34456677778888764
No 114
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.72 E-value=4e-17 Score=191.70 Aligned_cols=237 Identities=19% Similarity=0.167 Sum_probs=162.5
Q ss_pred eEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHH-HHHHHCCcEEEE
Q 002194 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWLARGFAILG 717 (954)
Q Consensus 639 ~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~G~~V~~ 717 (954)
.+.++++..||.+|.+.+|.|++ .+++|+||+.||....... . ..|. ..+ ..|+++||+|+.
T Consensus 9 ~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~~~-----~---~~y~----~~~~~~la~~Gy~vv~ 71 (587)
T 3i2k_A 9 ASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDVF-----A---WSTQ----STNWLEFVRDGYAVVI 71 (587)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCHH-----H---HHTT----TCCTHHHHHTTCEEEE
T ss_pred EEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCccc-----c---ccch----hhHHHHHHHCCCEEEE
Confidence 46789999999999999999975 2358999999874211000 0 0010 023 688999999999
Q ss_pred cCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC-CCC
Q 002194 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA-YNR 796 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~-~~~ 796 (954)
.+ .+|+|.+.+....+....+|+.++++||.+++..+ .+|+++|+||||++++.++++.|+.++|+|+.++. .+.
T Consensus 72 ~D---~RG~G~S~g~~~~~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 72 QD---TRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp EE---CTTSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred Ec---CCCCCCCCCccccccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 44 45666654432223567899999999999887665 79999999999999999999988999999999988 664
Q ss_pred CCCC---CCCccc-cchhhh------------------------------------------------------------
Q 002194 797 TLTP---FGFQNE-DRTLWE------------------------------------------------------------ 812 (954)
Q Consensus 797 ~~~~---~~~~~~-~~~~~~------------------------------------------------------------ 812 (954)
.... -+.... ....|.
T Consensus 148 ~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (587)
T 3i2k_A 148 RAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVD 227 (587)
T ss_dssp CCCCSCTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTT
T ss_pred ccceeecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhc
Confidence 3210 000000 000010
Q ss_pred ---cHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC---------Cc
Q 002194 813 ---ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA---------AR 880 (954)
Q Consensus 813 ---~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---------~~ 880 (954)
..+.|...++...+++|++|+|+++|..|.. ...+.++|++|+..++ .++++-|. .|... ..
T Consensus 228 ~~~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~----~~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~ 301 (587)
T 3i2k_A 228 HPDNDESWQSISLFERLGGLATPALITAGWYDGF----VGESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGI 301 (587)
T ss_dssp CCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTT----HHHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCG
T ss_pred CCCCChHHhcCChhhhhccCCCCEEEEccCCCcc----chHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCC
Confidence 0112333455567889999999999999976 3457889999987765 47777665 46521 11
Q ss_pred cc---HHHHHHHHHHHHHHhcccCC
Q 002194 881 ES---IMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 881 ~~---~~~~~~~i~~fl~~~l~~~~ 902 (954)
.. ..+..+.+++||++||+...
T Consensus 302 ~~~~~~~~~~~~~~~wFD~~Lkg~~ 326 (587)
T 3i2k_A 302 AATYPIQEATTMHKAFFDRHLRGET 326 (587)
T ss_dssp GGSCCHHHHHHHHHHHHHHHHSCCT
T ss_pred ccccccchhhHHHHHHHHHHhcCCC
Confidence 11 12334889999999998654
No 115
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.72 E-value=2.6e-16 Score=161.78 Aligned_cols=196 Identities=14% Similarity=0.100 Sum_probs=138.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002194 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (954)
Q Consensus 648 ~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G 727 (954)
++..+...++.|.. .+.|+||++||+... ...| ......|+ .||.|+.++.....+.|
T Consensus 14 ~~~~l~~~~~~~~~------~~~p~vv~lHG~g~~-----------~~~~----~~~~~~l~-~~~~vv~~d~~~~~~~g 71 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK------ESRECLFLLHGSGVD-----------ETTL----VPLARRIA-PTATLVAARGRIPQEDG 71 (223)
T ss_dssp CSSSSCEEEESTTS------SCCCEEEEECCTTBC-----------TTTT----HHHHHHHC-TTSEEEEECCSEEETTE
T ss_pred cCCCceEEEeCCCC------CCCCEEEEEecCCCC-----------HHHH----HHHHHhcC-CCceEEEeCCCCCcCCc
Confidence 34456655554432 124899999996311 1111 12344444 49999996643211111
Q ss_pred Ccc--------cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC
Q 002194 728 DEE--------ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT 799 (954)
Q Consensus 728 ~~~--------~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~ 799 (954)
.++ ..........+|+.+.++++.++..+|+++++++|||+||.+|+.++.++|++++++|+++|.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 151 (223)
T 3b5e_A 72 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV 151 (223)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC
T ss_pred cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc
Confidence 111 112234556788888888888775678899999999999999999999999999999999986542100
Q ss_pred CCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCC
Q 002194 800 PFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA 879 (954)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 879 (954)
.....+++|+|++||++|..|| .+.++ +++.++..|.++++++|+ ++|.+.
T Consensus 152 ------------------------~~~~~~~~P~li~~G~~D~~v~--~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~- 202 (223)
T 3b5e_A 152 ------------------------PATDLAGIRTLIIAGAADETYG--PFVPA-LVTLLSRHGAEVDARIIP-SGHDIG- 202 (223)
T ss_dssp ------------------------CCCCCTTCEEEEEEETTCTTTG--GGHHH-HHHHHHHTTCEEEEEEES-CCSCCC-
T ss_pred ------------------------ccccccCCCEEEEeCCCCCcCC--HHHHH-HHHHHHHCCCceEEEEec-CCCCcC-
Confidence 1223457899999999999998 89999 999999999999999999 899984
Q ss_pred cccHHHHHHHHHHHHHHhc
Q 002194 880 RESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 880 ~~~~~~~~~~i~~fl~~~l 898 (954)
.+..+.+.+||.+.+
T Consensus 203 ----~~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 203 ----DPDAAIVRQWLAGPI 217 (223)
T ss_dssp ----HHHHHHHHHHHHCC-
T ss_pred ----HHHHHHHHHHHHhhh
Confidence 233567889987654
No 116
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.72 E-value=3.4e-16 Score=165.94 Aligned_cols=202 Identities=15% Similarity=0.146 Sum_probs=142.9
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAV 747 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av 747 (954)
.|+||++||..... ..| ...+..|+++||.|+. .+..|+|.+... ........+|+.+++
T Consensus 40 ~~~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~v~~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 40 PVGVLLVHGFTGTP-----------HSM----RPLAEAYAKAGYTVCL---PRLKGHGTHYEDMERTTFHDWVASVEEGY 101 (270)
T ss_dssp SEEEEEECCTTCCG-----------GGT----HHHHHHHHHTTCEEEE---CCCTTCSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCh-----------hHH----HHHHHHHHHCCCEEEE---eCCCCCCCCccccccCCHHHHHHHHHHHH
Confidence 58999999963211 011 2457778889999999 666788877542 233566789999999
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC-----------CC------CCccc--c-
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-----------PF------GFQNE--D- 807 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-----------~~------~~~~~--~- 807 (954)
+++.++ .++++++|||+||.+++.++.++|+ ++++|+++|..+.... .+ .+... .
T Consensus 102 ~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3rm3_A 102 GWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176 (270)
T ss_dssp HHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCC
T ss_pred HHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHh
Confidence 999876 5699999999999999999999999 9999999986542100 00 00000 0
Q ss_pred ----chhhhcHHHHHh--cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcc
Q 002194 808 ----RTLWEATSTYVE--MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE 881 (954)
Q Consensus 808 ----~~~~~~~~~~~~--~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 881 (954)
.........+.. .+....+.++++|+|+++|++|..+| +..+.++++.+.. .+++++++|+++|.+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3rm3_A 177 LAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVP--PGNADIIFQGISS--TEKEIVRLRNSYHVATLDY 252 (270)
T ss_dssp CCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHSCC--SSEEEEEESSCCSCGGGST
T ss_pred hcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccC--HHHHHHHHHhcCC--CcceEEEeCCCCcccccCc
Confidence 000000000000 01223566789999999999999998 8889888887753 4679999999999986544
Q ss_pred cHHHHHHHHHHHHHHhc
Q 002194 882 SIMHVLWETDRWLQKYC 898 (954)
Q Consensus 882 ~~~~~~~~i~~fl~~~l 898 (954)
....+.+.+.+||+++.
T Consensus 253 ~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 253 DQPMIIERSLEFFAKHA 269 (270)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 55788999999999864
No 117
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.72 E-value=1.6e-15 Score=183.57 Aligned_cols=273 Identities=14% Similarity=0.103 Sum_probs=177.8
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..++|||||++|||+.+.. +++...||++|+++|+..+.+..... ...++|+ ||+.|+|+.......
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~----G~~~~~i~v~dl~tg~~~~~~~~~~k-----~~~~~Ws-Dg~~l~y~~~~~~~~- 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA----GSDWREIHLMDVESKQPLETPLKDVK-----FSGISWL-GNEGFFYSSYDKPDG- 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS----SCCEEEEEEEETTTCSEEEEEEEEEE-----SCCCEEE-TTTEEEEEESSCCC--
T ss_pred EEEEEEECCCCCEEEEEEecC----CCceEEEEEEECCCCCCCccccCCce-----eccEEEe-CCCEEEEEEecCccc-
Confidence 466789999999999988633 55568999999999987665321110 3578999 999999984332100
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC--ceeEcCCC-c----cccccccCC
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG--TVKEIGPP-A----VYTSLDPSP 341 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G--~~~~l~~~-~----~~~~~~~Sp 341 (954)
+ . +... ....+||++++ ++ +.+.+... . ...++.|||
T Consensus 199 --------~-~------------------~~~~--------~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp 243 (693)
T 3iuj_A 199 --------S-E------------------LSAR--------TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE 243 (693)
T ss_dssp -----------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT
T ss_pred --------c-c------------------cccc--------CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC
Confidence 0 0 0000 02356899988 54 33455443 3 356789999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCc--eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~--~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~ 419 (954)
||++|++.+..... ..+++++|++++ +.+.++.... .... .|++||+.++|..+.
T Consensus 244 Dg~~l~~~~~~~~~---------~~~i~~~d~~~~~~~~~~l~~~~~-------------~~~~-~~~~~g~~l~~~t~~ 300 (693)
T 3iuj_A 244 DDRFLLISAANSTS---------GNRLYVKDLSQENAPLLTVQGDLD-------------ADVS-LVDNKGSTLYLLTNR 300 (693)
T ss_dssp TSCEEEEEEESSSS---------CCEEEEEETTSTTCCCEEEECSSS-------------SCEE-EEEEETTEEEEEECT
T ss_pred CCCEEEEEEccCCC---------CcEEEEEECCCCCCceEEEeCCCC-------------ceEE-EEeccCCEEEEEECC
Confidence 99999998754321 248999999865 5566654321 1112 288999988887432
Q ss_pred ccCCCccccccCCCeEEEEecCCCCCCCc---eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcE
Q 002194 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (954)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (954)
. .....|+++++ +++.. +.++.....+. .|+++|+.|++....++ ..+|++++++++ ...
T Consensus 301 ~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g-~~~l~~~d~~g~--~~~ 363 (693)
T 3iuj_A 301 D---------APNRRLVTVDA---ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA-TARVEQFDYEGK--RVR 363 (693)
T ss_dssp T---------CTTCEEEEEET---TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT-EEEEEEECTTSC--EEE
T ss_pred C---------CCCCEEEEEeC---CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC-eeEEEEEECCCC--eeE
Confidence 1 12568999996 44444 56665544433 89999999999887665 378999999864 333
Q ss_pred EEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccC
Q 002194 497 ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (954)
Q Consensus 497 ~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 571 (954)
.+.-.....+.. +.+++|++.++|.... .+ ..+.||.+|+++++.+.+....
T Consensus 364 ~l~~p~~~~~~~------~~~~~d~~~l~~~~ss--------------~~---tP~~l~~~d~~~g~~~~l~~~~ 415 (693)
T 3iuj_A 364 EVALPGLGSVSG------FNGKHDDPALYFGFEN--------------YA---QPPTLYRFEPKSGAISLYRASA 415 (693)
T ss_dssp EECCSSSSEEEE------CCCCTTCSCEEEEEEC--------------SS---SCCEEEEECTTTCCEEEEECCC
T ss_pred EeecCCCceEEe------eecCCCCCEEEEEecC--------------CC---CCCEEEEEECCCCeEEEEEeCC
Confidence 332211111111 4578899988887632 11 2346999999999988887655
No 118
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.72 E-value=1.8e-16 Score=171.30 Aligned_cols=238 Identities=13% Similarity=0.076 Sum_probs=154.4
Q ss_pred ceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
+.+.+++.+. .|.++.++ +.|. + .++|+||++||++... ....|... ......+++.||+|+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~-~-----~~~p~vvllHG~~~~~---------~~~~w~~~-~~~~~~~~~~~~~vv 70 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSG-G-----ANSPALYLLDGLRAQD---------DFSGWDIN-TPAFEWYDQSGLSVV 70 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC-S-----TTBCEEEEECCTTCCS---------SSCHHHHH-CCHHHHHTTSSCEEE
T ss_pred eEEEEEEECccCCCceEEE-ECCC-C-----CCCCEEEEeCCCCCCC---------CcchhhcC-CCHHHHHhcCCeEEE
Confidence 4677788775 46777776 4443 2 2489999999963100 00011100 012345667899999
Q ss_pred EcCCCCCCCCCCccc---------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEE
Q 002194 717 GGPTTPIIGEGDEEA---------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~---------~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (954)
.++..+..++..... ...+.....+|+... +.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 71 ~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 147 (304)
T 1sfr_A 71 MPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGW---LQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYA 147 (304)
T ss_dssp EECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHH---HHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred EECCCCCccccccCCccccccccccccHHHHHHHHHHHH---HHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEE
Confidence 977754433321100 112222223444444 44433477789999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCC---------c-cccchhhh--cHHHHHhcCcccccCCC---CCCEEEEEeCCCC----------
Q 002194 788 IARSGAYNRTLTPFGF---------Q-NEDRTLWE--ATSTYVEMSPFMSANKL---KKPILLVHGEEDN---------- 842 (954)
Q Consensus 788 v~~~~~~~~~~~~~~~---------~-~~~~~~~~--~~~~~~~~sp~~~~~~~---~~P~Lii~G~~D~---------- 842 (954)
|+++|.++.....+.. . ......|. ....+...+|...+.++ ++|+||+||+.|.
T Consensus 148 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~ 227 (304)
T 1sfr_A 148 GAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPA 227 (304)
T ss_dssp EEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHH
T ss_pred EEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCcccccccccc
Confidence 9999987643211000 0 00000111 12345666777666555 5899999999998
Q ss_pred ----CCCCchHHHHHHHHHHHhCC-CcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhccc
Q 002194 843 ----NSGTLTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 843 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
.++ ..++++++++|+..| +++++.+|++++|.+. .....+..++.||.++|..
T Consensus 228 ~~~e~~~--~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~~ 285 (304)
T 1sfr_A 228 KFLEGFV--RTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGA 285 (304)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTC
T ss_pred chhHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcCC
Confidence 556 889999999999999 9999999977799753 2345567889999999864
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.6e-15 Score=168.29 Aligned_cols=287 Identities=8% Similarity=0.045 Sum_probs=189.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+....+ +.|.+|++.. + .....+.. +..
T Consensus 34 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~vwd~~~-~--~~~~~~~~--h~~ 75 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKD---------------------------------SSASVWYSLN-G--ERLGTLDG--HTG 75 (369)
T ss_dssp CEEEEEECTTSCEEEEEESS---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred eEEEEEEcCCCCEEEEEeCC---------------------------------CEEEEEeCCC-c--hhhhhhhh--cCC
Confidence 46678999999999988765 4799999854 2 22333432 234
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..+.|+|||+.|+.... ...|.++|+++++.......... +..+.|+|||+.|++......
T Consensus 76 ~v~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~~--- 138 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSA---------DYSIKLWDVSNGQCVATWKSPVP-----VKRVEFSPCGNYFLAILDNVM--- 138 (369)
T ss_dssp CEEEEEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECSSC-----EEEEEECTTSSEEEEEECCBT---
T ss_pred cEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCcEEEEeecCCC-----eEEEEEccCCCEEEEecCCcc---
Confidence 6889999999999988652 45788889988877665553332 678999999999987721100
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC------------ceeEcCCC---cc
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG------------TVKEIGPP---AV 333 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G------------~~~~l~~~---~~ 333 (954)
. ....|.++++ .+ ....+... ..
T Consensus 139 --------------------------------~---------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 139 --------------------------------K---------NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp --------------------------------T---------BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred --------------------------------C---------CCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 0 1123444454 22 11112111 26
Q ss_pred ccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC-ceE-EEeccCCCcccCCccccccccCccceeeccCCC
Q 002194 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (954)
Q Consensus 334 ~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g-~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~ 411 (954)
+..++|+|||+.|+....+ +.|.+||+.. ... ..+..+. ..+..+.|+|||+
T Consensus 178 ~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKD-------------GKISKYDVSNNYEYVDSIDLHE-------------KSISDMQFSPDLT 231 (369)
T ss_dssp EEEEEECGGGCEEEEEETT-------------SEEEEEETTTTTEEEEEEECCS-------------SCEEEEEECTTSS
T ss_pred eeEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCcEeEEEEecCC-------------CceeEEEECCCCC
Confidence 7788999999999887733 3899999986 333 3333221 3456799999999
Q ss_pred CceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEecccc----------ce
Q 002194 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTR----------RT 481 (954)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~----------~~ 481 (954)
.++.. +..+.|.+|++ ..++..........+..+.|+|+++.+++....+.. ..
T Consensus 232 ~l~~~-------------~~d~~i~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 232 YFITS-------------SRDTNSFLVDV---STLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp EEEEE-------------ETTSEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred EEEEe-------------cCCceEEEEEC---CCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 77665 33568999996 545554444466667889999999999998755421 11
Q ss_pred EEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCC
Q 002194 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (954)
Q Consensus 482 ~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 561 (954)
.+.+++..++ +.......+...+.. ++|+|||++|+.... ...|++|++++
T Consensus 296 ~i~~~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~---------------------dg~v~iw~~~~ 346 (369)
T 3zwl_B 296 EARFYHKIFE--EEIGRVQGHFGPLNT------VAISPQGTSYASGGE---------------------DGFIRLHHFEK 346 (369)
T ss_dssp EEEEEETTTC--CEEEEEECCSSCEEE------EEECTTSSEEEEEET---------------------TSEEEEEEECH
T ss_pred eeEEEecCCC--cchhheecccCcEEE------EEECCCCCEEEEEcC---------------------CCeEEEEECcc
Confidence 5666777664 333333333333333 789999998887762 23488888875
Q ss_pred CC
Q 002194 562 GS 563 (954)
Q Consensus 562 g~ 563 (954)
+.
T Consensus 347 ~~ 348 (369)
T 3zwl_B 347 SY 348 (369)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 120
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.71 E-value=2.2e-16 Score=165.59 Aligned_cols=180 Identities=16% Similarity=0.103 Sum_probs=130.6
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCccc---------chhhHHHH
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---------NDRFVEQL 739 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~---------~~~~~~~~ 739 (954)
+.|+||++||+..... .| ......|+ .+|.|+.+++ +..|+|.+.. ........
T Consensus 61 ~~p~vv~~HG~~~~~~-----------~~----~~~~~~l~-~~~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 123 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDEN-----------QF----FDFGARLL-PQATILSPVG-DVSEHGAARFFRRTGEGVYDMVDLERA 123 (251)
T ss_dssp TSCEEEEECCTTCCHH-----------HH----HHHHHHHS-TTSEEEEECC-SEEETTEEESSCBCGGGCBCHHHHHHH
T ss_pred CCcEEEEEeCCCCCHh-----------HH----HHHHHhcC-CCceEEEecC-CcCCCCCcccccCCCCCcCCHHHHHHH
Confidence 4799999999631100 01 12333344 4699999632 3445554321 11223455
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHh
Q 002194 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVE 819 (954)
Q Consensus 740 ~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (954)
++|+.++++++.++. +.++++|+|||+||++++.++.++|++++++|+++|..+...
T Consensus 124 ~~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------------------- 180 (251)
T 2r8b_A 124 TGKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------------------
T ss_pred HHHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------------------
Confidence 788888888887764 678999999999999999999999999999999999754321
Q ss_pred cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 820 ~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
......+++|+|++||++|.++| ++++++++++++..+.++++ .+++++|.+. .+..+.+.+||.+++.
T Consensus 181 ---~~~~~~~~~P~li~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 181 ---KISPAKPTRRVLITAGERDPICP--VQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp ---CCCCCCTTCEEEEEEETTCTTSC--HHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC-
T ss_pred ---cccccccCCcEEEeccCCCccCC--HHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhcC
Confidence 01223457899999999999998 99999999999987777777 5666799984 3446789999998875
No 121
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.71 E-value=1.7e-15 Score=167.21 Aligned_cols=289 Identities=12% Similarity=0.120 Sum_probs=174.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce--eeeecCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE--IEIQGFPD 187 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~--~~lt~~~~ 187 (954)
.+..++|||||++||..+.+ ..|.||++.. +.. .......+
T Consensus 18 ~v~~l~~sp~g~~las~~~D---------------------------------~~i~iw~~~~----~~~~~~~~~~~~h 60 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD---------------------------------RRIRIWGTEG----DSWICKSVLSEGH 60 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT---------------------------------SCEEEEEEET----TEEEEEEEECSSC
T ss_pred cEEEEEECCCCCEEEEEcCC---------------------------------CeEEEEEcCC----Ccceeeeeecccc
Confidence 45678999999999998876 5799999854 221 11111112
Q ss_pred CCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeec--ccCCCccccccccceeEecCCeEEEEEecCC
Q 002194 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (954)
Q Consensus 188 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l--t~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (954)
...+..++|||||++|+... .++...|| +.+++....+ ...... .+..++|+|||+.|+...
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s-------~D~~v~iw--~~~~~~~~~~~~~~~h~~----~v~~v~~sp~~~~l~s~s--- 124 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASAS-------FDATTCIW--KKNQDDFECVTTLEGHEN----EVKSVAWAPSGNLLATCS--- 124 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEE-------TTSCEEEE--EECCC-EEEEEEECCCSS----CEEEEEECTTSSEEEEEE---
T ss_pred CCcEEEEEECCCCCEEEEEE-------CCCcEEEE--EccCCCeEEEEEccCCCC----CceEEEEeCCCCEEEEEE---
Confidence 24688999999999998865 33444555 5445432222 122222 277899999999998761
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc----eeEcCCC-cccccccc
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP-AVYTSLDP 339 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~----~~~l~~~-~~~~~~~~ 339 (954)
. ...|.++++ ++. ...+... ..+..++|
T Consensus 125 ------------------~----------------------------D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 125 ------------------R----------------------------DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp ------------------T----------------------------TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred ------------------C----------------------------CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 1 123556666 432 2233333 66788999
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~ 419 (954)
+|||++|+..+.+ +.+.+|+...+....+.... ++...+..++|+|||+.|+..
T Consensus 159 ~p~~~~l~s~s~d-------------~~i~~w~~~~~~~~~~~~~~----------~h~~~v~~l~~sp~g~~l~s~--- 212 (345)
T 3fm0_A 159 HPSQELLASASYD-------------DTVKLYREEEDDWVCCATLE----------GHESTVWSLAFDPSGQRLASC--- 212 (345)
T ss_dssp CSSSSCEEEEETT-------------SCEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECTTSSEEEEE---
T ss_pred CCCCCEEEEEeCC-------------CcEEEEEecCCCEEEEEEec----------CCCCceEEEEECCCCCEEEEE---
Confidence 9999999988743 38999998866533222211 122445789999999976654
Q ss_pred ccCCCccccccCCCeEEEEecCCCCCCCc-----------e---EEee-cccccCceeeccCCceEEEEEeccccceEEE
Q 002194 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGP-----------E---ILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTW 484 (954)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-----------~---~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~ 484 (954)
+..+.|.+|+.. ..+... + .+.. +...+..++|+|++..|+.++.++. .++|
T Consensus 213 ----------s~D~~v~iW~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~--i~vw 279 (345)
T 3fm0_A 213 ----------SDDRTVRIWRQY-LPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA--IRVF 279 (345)
T ss_dssp ----------ETTSCEEEEEEE-CTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC--EEEE
T ss_pred ----------eCCCeEEEeccc-cCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe--EEEE
Confidence 334466666630 111110 1 1111 3445677999999999988876554 7788
Q ss_pred EEcCCCCCCCcEE-E----ecCCCCCccCCCCCCCeeeccCCc-EEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEE
Q 002194 485 VISPGSKDVAPRI-L----FDRSSEDVYSDPGSPMMRRTSTGT-YVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFD 558 (954)
Q Consensus 485 ~~d~~~~~~~~~~-l----~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 558 (954)
..+.......+.. + ...+...+.. ++|+|++. .|+.... ...|++|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~------v~~~p~~~~~laS~s~---------------------Dg~v~~W~ 332 (345)
T 3fm0_A 280 QEDPNSDPQQPTFSLTAHLHQAHSQDVNC------VAWNPKEPGLLASCSD---------------------DGEVAFWK 332 (345)
T ss_dssp EECTTSCTTSCCEEEEEEETTSSSSCEEE------EEECSSSTTEEEEEET---------------------TSCEEEEE
T ss_pred EeCCCCCcceeeEEEEeeecccccCcEeE------eEEeCCCceEEEEcCC---------------------CCcEEEEE
Confidence 8775542112211 1 1223333333 88999985 6655541 22488999
Q ss_pred CCCCC
Q 002194 559 INTGS 563 (954)
Q Consensus 559 ~~~g~ 563 (954)
+.+++
T Consensus 333 ~~~~~ 337 (345)
T 3fm0_A 333 YQRPE 337 (345)
T ss_dssp ECC--
T ss_pred ecCCC
Confidence 87665
No 122
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.71 E-value=8.8e-16 Score=164.89 Aligned_cols=208 Identities=15% Similarity=0.126 Sum_probs=137.0
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCC---cccHHHHHHHHC--
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPR---IGSTSVLLWLAR-- 711 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~---~~~~~~~~la~~-- 711 (954)
.+.+.+++.+.+| .+.+++|+|+++++.+ ++|+||++||++.... .|.. .....+..|+++
T Consensus 39 g~~~~~~~~s~~~-~~~~~vy~P~~~~~~~--~~Pvlv~lHG~~~~~~-----------~~~~~~~~~~~~~~~l~~~g~ 104 (297)
T 1gkl_A 39 GRIVKETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGGGENEN-----------TIFSNDVKLQNILDHAIMNGE 104 (297)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTCCTTS--CCEEEEEECCTTCCTT-----------STTSTTTCHHHHHHHHHHTTS
T ss_pred ceEEEEEEEcCCC-EEEEEEEeCCCCCCCC--CCCEEEEECCCCCCcc-----------hhhcccchHHHHHHHHHHcCC
Confidence 4567888988876 8999999999986543 5999999999753211 1111 012345566776
Q ss_pred --CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---------CCCCCcEEEEeeChHHHHHHHHHHhC
Q 002194 712 --GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---------VAHPSKIAVGGHSYGAFMTANLLAHA 780 (954)
Q Consensus 712 --G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---------~~d~~ri~l~G~S~GG~~a~~~a~~~ 780 (954)
+|+|+.+++++..+ ....+....++|++..++...... ..|+++++|+|+||||++|+.++.++
T Consensus 105 ~~~~ivv~pd~~~~~~-----~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~ 179 (297)
T 1gkl_A 105 LEPLIVVTPTFNGGNC-----TAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNC 179 (297)
T ss_dssp SCCEEEEECCSCSTTC-----CTTTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCcCCcc-----chHHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhC
Confidence 49999977654322 122333444555555544321111 13677899999999999999999999
Q ss_pred CCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHh
Q 002194 781 PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG 860 (954)
Q Consensus 781 p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~ 860 (954)
|++|+++++++|.+.... ...........+... ..+.....++++.+|+.|.. ..+++++.++|+.
T Consensus 180 p~~f~~~v~~sg~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~----~~~~~~l~~~L~~ 245 (297)
T 1gkl_A 180 LDYVAYFMPLSGDYWYGN-------SPQDKANSIAEAINR---SGLSKREYFVFAATGSEDIA----YANMNPQIEAMKA 245 (297)
T ss_dssp TTTCCEEEEESCCCCBSS-------SHHHHHHHHHHHHHH---HTCCTTSCEEEEEEETTCTT----HHHHHHHHHHHHT
T ss_pred chhhheeeEeccccccCC-------ccchhhhHHHHHHhh---ccCCcCcEEEEEEeCCCccc----chhHHHHHHHHHH
Confidence 999999999999753211 000000011111111 11222345677789999975 5678999999999
Q ss_pred CC----------CcEEEEEeCCCCCcC
Q 002194 861 HG----------ALCRLVILPFESHGY 877 (954)
Q Consensus 861 ~g----------~~~~~~~~~~~~H~~ 877 (954)
.| +++++.++|+++|.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 246 LPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp STTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred cCCccccccccCCceEEEECCCCCcCH
Confidence 98 699999999999975
No 123
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.4e-15 Score=170.41 Aligned_cols=282 Identities=11% Similarity=0.135 Sum_probs=175.4
Q ss_pred CCCCCceecCCCC-EEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEc----cCCCCC----Cce
Q 002194 109 PPLPALSFSPQRD-KILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQL----FPDGKL----GQE 179 (954)
Q Consensus 109 ~~~~~~~~SPDG~-~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~----~~~g~~----~~~ 179 (954)
..+..++|||||+ +||....+ +.|.+|++ .. +.. ...
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~~~-~~~~~~~~~~ 91 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKN---------------------------------SVARLARIVETDQE-GKKYWKLTII 91 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETB---------------------------------TEEEEEEEEEC-------CEEEEEE
T ss_pred CceEEEEECCCCCcEEEEecCC---------------------------------ceEEEEEEecccCC-cccccccccc
Confidence 4688999999999 99887764 46888888 43 210 012
Q ss_pred eeeec-CC-------CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeE
Q 002194 180 IEIQG-FP-------DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW 251 (954)
Q Consensus 180 ~~lt~-~~-------~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w 251 (954)
..+.. +. +...+..+.|||||+.|+.... ...|.+++.++.....+...... +..+.|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~i~~~~~~~~~~~~~~~~~-----v~~~~~ 157 (425)
T 1r5m_A 92 AELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE---------NGELRLWNKTGALLNVLNFHRAP-----IVSVKW 157 (425)
T ss_dssp EEEECCCCCC------CBCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCCSC-----EEEEEE
T ss_pred ccccccccccccccCCCCceEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCeeeeccCCCcc-----EEEEEE
Confidence 22221 00 1226888999999999998652 34566667555555555433332 678999
Q ss_pred ecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcC
Q 002194 252 VNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIG 329 (954)
Q Consensus 252 spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~ 329 (954)
+|||+.|++.. ....|.++++ +++.. .+.
T Consensus 158 ~~~~~~l~~~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 158 NKDGTHIISMD-------------------------------------------------VENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CTTSSEEEEEE-------------------------------------------------TTCCEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEe-------------------------------------------------cCCeEEEEECCCCcEEEEee
Confidence 99999888761 1123556666 55332 222
Q ss_pred CC-cc---------------ccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCc
Q 002194 330 PP-AV---------------YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPI 392 (954)
Q Consensus 330 ~~-~~---------------~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~ 392 (954)
.. .. +..+.|+|++. ++....+ +.+.+||+..++. ..+..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------g~i~~~d~~~~~~~~~~~~~-------- 246 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK-------------GAIFVYQITEKTPTGKLIGH-------- 246 (425)
T ss_dssp CC---------------CCCBSCCEEEETTE-EEEECGG-------------GCEEEEETTCSSCSEEECCC--------
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC-------------CeEEEEEcCCCceeeeeccC--------
Confidence 22 22 78899999876 4443322 3899999986533 222221
Q ss_pred cccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEE
Q 002194 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVY 472 (954)
Q Consensus 393 ~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~ 472 (954)
...+..++|+||++.++.. +..+.|.+|++ ..+.....+..+...+..+.|+||| .|+.
T Consensus 247 -----~~~i~~~~~~~~~~~l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 247 -----HGPISVLEFNDTNKLLLSA-------------SDDGTLRIWHG--GNGNSQNCFYGHSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp -----SSCEEEEEEETTTTEEEEE-------------ETTSCEEEECS--SSBSCSEEECCCSSCEEEEEEETTT-EEEE
T ss_pred -----CCceEEEEECCCCCEEEEE-------------cCCCEEEEEEC--CCCccceEecCCCccEEEEEECCCC-EEEE
Confidence 1345679999999966654 33557889986 3334445555567778889999999 5555
Q ss_pred EEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCC
Q 002194 473 ESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIP 552 (954)
Q Consensus 473 ~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (954)
...+ ..|.++++.++ +...........+.. +.|+|+|++|+.... ..
T Consensus 306 ~~~d----~~i~i~d~~~~--~~~~~~~~~~~~i~~------~~~s~~~~~l~~~~~---------------------dg 352 (425)
T 1r5m_A 306 CSMD----GSVRLWSLKQN--TLLALSIVDGVPIFA------GRISQDGQKYAVAFM---------------------DG 352 (425)
T ss_dssp EETT----SEEEEEETTTT--EEEEEEECTTCCEEE------EEECTTSSEEEEEET---------------------TS
T ss_pred EeCC----CcEEEEECCCC--cEeEecccCCccEEE------EEEcCCCCEEEEEEC---------------------CC
Confidence 5433 34677777664 333333333333333 789999998887762 12
Q ss_pred eEEEEECCCCC
Q 002194 553 FLDLFDINTGS 563 (954)
Q Consensus 553 ~l~~~d~~~g~ 563 (954)
.|++||+.+++
T Consensus 353 ~i~i~~~~~~~ 363 (425)
T 1r5m_A 353 QVNVYDLKKLN 363 (425)
T ss_dssp CEEEEECHHHH
T ss_pred eEEEEECCCCc
Confidence 48899987665
No 124
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=1e-14 Score=161.05 Aligned_cols=275 Identities=9% Similarity=-0.032 Sum_probs=175.4
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
...++|||||++|++..... ........|+++|+++++.......... ...++|+|||+.++++..
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~--~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~------- 108 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQS--RKLDKGGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNT------- 108 (353)
T ss_dssp EEEEEEETTTTEEEEEECCC--TTTEESEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEET-------
T ss_pred ccceEECCCCCEEEEEcCCC--cCCCCCccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEec-------
Confidence 45689999999997765311 0001267899999998877655443332 458899999998887611
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-c---------cccccc
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-A---------VYTSLD 338 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~---------~~~~~~ 338 (954)
....|+++|+ +|+. ..+... . ....+.
T Consensus 109 -----------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 109 -----------------------------------------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp -----------------------------------------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred -----------------------------------------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 1235888888 6654 333222 1 145689
Q ss_pred cCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002194 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (954)
Q Consensus 339 ~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~ 418 (954)
|||||++|++..... ...|++||.++++......... ..+..++|+|||+.+++.
T Consensus 148 ~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~s~dg~~l~~~-- 202 (353)
T 3vgz_A 148 ADDATNTVYISGIGK-----------ESVIWVVDGGNIKLKTAIQNTG------------KMSTGLALDSEGKRLYTT-- 202 (353)
T ss_dssp EETTTTEEEEEEESS-----------SCEEEEEETTTTEEEEEECCCC------------TTCCCCEEETTTTEEEEE--
T ss_pred ECCCCCEEEEEecCC-----------CceEEEEcCCCCceEEEecCCC------------CccceEEECCCCCEEEEE--
Confidence 999999988876322 2379999998766543322110 123568999999977665
Q ss_pred eccCCCccccccCCCeEEEEecCCCCCCCce-EEee----cccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCC
Q 002194 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-ILHK----LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (954)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~-~l~~----~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (954)
...+.+++++. .+++.. .+.. .......++|+|||+.|++....+ ..|+++|+.++
T Consensus 203 -----------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---~~v~~~d~~~~-- 263 (353)
T 3vgz_A 203 -----------NADGELITIDT---ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---AEVLVVDTRNG-- 263 (353)
T ss_dssp -----------CTTSEEEEEET---TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS---SEEEEEETTTC--
T ss_pred -----------cCCCeEEEEEC---CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC---CEEEEEECCCC--
Confidence 23457889985 444333 3322 122234589999999987765433 46899999875
Q ss_pred CcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcc
Q 002194 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (954)
Q Consensus 494 ~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 573 (954)
+........ ... .+.|+|||++++.... ....|++||+++++..........
T Consensus 264 ~~~~~~~~~--~~~------~~~~s~dg~~l~v~~~--------------------~~~~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 264 NILAKVAAP--ESL------AVLFNPARNEAYVTHR--------------------QAGKVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp CEEEEEECS--SCC------CEEEETTTTEEEEEET--------------------TTTEEEEEETTTTEEEEEEECCSE
T ss_pred cEEEEEEcC--CCc------eEEECCCCCEEEEEEC--------------------CCCeEEEEECCCCeEEEEEecCCC
Confidence 222222211 111 1789999998776651 123599999998887665543321
Q ss_pred cccceeEEeccCCccccccccCCEEEEEEec
Q 002194 574 KYYETTVALMSDQTEGDLYLNQLKILTSKES 604 (954)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s 604 (954)
.. ..+|+|||+.+++....
T Consensus 316 -----~~-------~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 -----PN-------SLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----EE-------EEEECTTSCEEEEEEEC
T ss_pred -----CC-------eEEEcCCCCEEEEEEcc
Confidence 11 25689999988887776
No 125
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.70 E-value=1.1e-15 Score=168.39 Aligned_cols=243 Identities=17% Similarity=0.153 Sum_probs=154.4
Q ss_pred CceEEEEEEcCC--C--eEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH-HC
Q 002194 637 LQKELIKYQRKD--G--VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-AR 711 (954)
Q Consensus 637 ~~~~~~~~~~~~--g--~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~ 711 (954)
....++.|.+.| | ..+.+++++|.+. +++.|+|++.||...... ..+.........++..|+ ++
T Consensus 41 ~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~~~~-------~~ps~~~~~~~~~~~~lal~~ 109 (377)
T 4ezi_A 41 LQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRFERN-------DVPSRNNEKNYIYLAAYGNSA 109 (377)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCCSTT-------CSGGGCCGGGHHHHHHHTTTT
T ss_pred cEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcCCcc-------cCCCcCcccchHHHHHHHHhC
Confidence 456778887765 4 4688999999862 246999999999752110 001000001123456688 99
Q ss_pred CcEEEEcCCCCCCCCCCccc-c-----hhhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCCC--
Q 002194 712 GFAILGGPTTPIIGEGDEEA-N-----DRFVEQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPH-- 782 (954)
Q Consensus 712 G~~V~~~~~~~~~G~G~~~~-~-----~~~~~~~~~D~~~av~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-- 782 (954)
||+|+.+|++ |+|.+.. . .......+.|.+.++..+.+. +..+.++|+++|||+||+++++++...|+
T Consensus 110 Gy~Vv~~D~r---G~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~ 186 (377)
T 4ezi_A 110 GYMTVMPDYL---GLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEY 186 (377)
T ss_dssp CCEEEEECCT---TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEeCCC---CCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhC
Confidence 9999995554 5554432 1 111223345555555444443 44467899999999999999999887543
Q ss_pred ---cccEEEEeccCCCCCCC-------C--C-----C------------Ccc-------ccchhhh--------------
Q 002194 783 ---LFCCGIARSGAYNRTLT-------P--F-----G------------FQN-------EDRTLWE-------------- 812 (954)
Q Consensus 783 ---~~~a~v~~~~~~~~~~~-------~--~-----~------------~~~-------~~~~~~~-------------- 812 (954)
.++++++.++++|.... . . + +.. ......+
T Consensus 187 ~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (377)
T 4ezi_A 187 PDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQ 266 (377)
T ss_dssp TTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHH
T ss_pred CCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhh
Confidence 58899999887662110 0 0 0 000 0000000
Q ss_pred ----------cHH---HHH-hcCc-cc--------ccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEE
Q 002194 813 ----------ATS---TYV-EMSP-FM--------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (954)
Q Consensus 813 ----------~~~---~~~-~~sp-~~--------~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (954)
... .+. ..+| +. .-.++++|+||+||++|.+|| +.++++++++++..|. ++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp--~~~~~~l~~~l~~~G~-v~~~~ 343 (377)
T 4ezi_A 267 ALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVP--YAGAEMAYHSFRKYSD-FVWIK 343 (377)
T ss_dssp HSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSC--HHHHHHHHHHHHTTCS-CEEEE
T ss_pred ccCCCHHHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCC--HHHHHHHHHHHHhcCC-EEEEE
Confidence 000 000 0111 10 012457899999999999999 9999999999999999 99999
Q ss_pred eCC--CCCcCCCcccHHHHHHHHHHHHHHhccc
Q 002194 870 LPF--ESHGYAARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 870 ~~~--~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
|++ .+|... .......+++||++++..
T Consensus 344 ~~~~~~~H~~~----~~~~~~~~~~wl~~~~~~ 372 (377)
T 4ezi_A 344 SVSDALDHVQA----HPFVLKEQVDFFKQFERQ 372 (377)
T ss_dssp ESCSSCCTTTT----HHHHHHHHHHHHHHHHTS
T ss_pred cCCCCCCccCh----HHHHHHHHHHHHHHhhcc
Confidence 999 899764 245678899999999864
No 126
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.70 E-value=6e-16 Score=167.68 Aligned_cols=227 Identities=15% Similarity=0.145 Sum_probs=145.2
Q ss_pred ceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 638 ~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
..+.+++.. +|..+....+.+.. .++..|+||++||++.... .| ...+..|+++||.|++
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~p~vv~~hG~~~~~~-----------~~----~~~~~~l~~~g~~v~~ 78 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAP----KKANGRTILLMHGKNFCAG-----------TW----ERTIDVLADAGYRVIA 78 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECC----SSCCSCEEEEECCTTCCGG-----------GG----HHHHHHHHHTTCEEEE
T ss_pred cceeEEEec-CCCCeeEEEeecCC----CCCCCCeEEEEcCCCCcch-----------HH----HHHHHHHHHCCCeEEE
Confidence 466777764 56666655554422 1224699999999642111 11 2456778889999999
Q ss_pred cCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCC
Q 002194 718 GPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (954)
.+.+|+|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|+++|..
T Consensus 79 ---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 79 ---VDQVGFCKSSKPAHYQYSFQQLAANTHALLERL------GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp ---ECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred ---eecCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 5666777775432 23344455555554442 44689999999999999999999999999999999853
Q ss_pred CCCCC----CCCC-------------------------cc---ccchhhh---------------------cHHHHHhcC
Q 002194 795 NRTLT----PFGF-------------------------QN---EDRTLWE---------------------ATSTYVEMS 821 (954)
Q Consensus 795 ~~~~~----~~~~-------------------------~~---~~~~~~~---------------------~~~~~~~~s 821 (954)
..... .... .. .....|. ........+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (315)
T 4f0j_A 150 LEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQP 229 (315)
T ss_dssp SSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCC
T ss_pred cCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccch
Confidence 21100 0000 00 0000000 001112223
Q ss_pred cccccCCCCCCEEEEEeCCCCCCCCchHHH------------HHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHH
Q 002194 822 PFMSANKLKKPILLVHGEEDNNSGTLTMQS------------DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (954)
Q Consensus 822 p~~~~~~~~~P~Lii~G~~D~~v~~~~~~~------------~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 889 (954)
....+.++++|+|++||++|..+| ..+. .+..+.+.....++++++++++||... .++...+.+.
T Consensus 230 ~~~~l~~~~~P~lii~G~~D~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~~ 306 (315)
T 4f0j_A 230 VVYELDRLQMPTLLLIGEKDNTAI--GKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQ-IQAPERFHQA 306 (315)
T ss_dssp CGGGGGGCCSCEEEEEETTCCCCT--TGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHH-HHSHHHHHHH
T ss_pred hhhhcccCCCCeEEEEecCCCcCc--cccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchh-hhCHHHHHHH
Confidence 445678889999999999999987 5444 455555555556789999999999863 5566777788
Q ss_pred HHHHHHH
Q 002194 890 TDRWLQK 896 (954)
Q Consensus 890 i~~fl~~ 896 (954)
|.+||++
T Consensus 307 i~~fl~~ 313 (315)
T 4f0j_A 307 LLEGLQT 313 (315)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 8888764
No 127
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.70 E-value=5.1e-16 Score=172.13 Aligned_cols=284 Identities=10% Similarity=0.050 Sum_probs=161.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++||..+.+ .. ...+..|++|+... +...............
T Consensus 44 ~V~~v~fSpDG~~las~s~d----------------------~~-----~~wd~~v~~~~~~~-~~~~~~~~~~~~~~~~ 95 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSL----------------------SS-----RTWGGSIWVFKDPE-GAPNESLCTAGVQTEA 95 (357)
T ss_dssp EEEEEEECSSSCEEEEEECS----------------------SS-----SSCCEEEEEESSCC----CGGGCSEEEECSS
T ss_pred CEEEEEECCCCCEEEEEcCC----------------------CC-----ccccCeEEEEECCC-CCcceeEecccCCCCC
Confidence 46789999999999998764 00 01124688888743 2111111111111223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+...+|+||++.|+ .. . ...|.++|+.+++...+...........+..++|+|||+.|+...
T Consensus 96 ~V~~~~~s~d~~~l~-~s-------~--dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs------- 158 (357)
T 4g56_B 96 GVTDVAWVSEKGILV-AS-------D--SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG------- 158 (357)
T ss_dssp CEEEEEEETTTEEEE-EE-------T--TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-------
T ss_pred CEEEEEEcCCCCEEE-EE-------C--CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-------
Confidence 588899999987554 33 2 235666677666543322111111122267899999999998761
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCC-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~-~~~~~~~~SpDGk~l 346 (954)
....|.++|+ +++.. .+... ..+..++|+||++.+
T Consensus 159 ------------------------------------------~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 159 ------------------------------------------KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 1234667788 66543 34433 677889999999765
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
+++... ++.|.+||+..++........ .....+..++|+||+..++...
T Consensus 197 ~~s~~~------------dg~v~~wd~~~~~~~~~~~~~----------~~~~~v~~v~~sp~~~~~la~g--------- 245 (357)
T 4g56_B 197 FLSCGE------------DGRILLWDTRKPKPATRIDFC----------ASDTIPTSVTWHPEKDDTFACG--------- 245 (357)
T ss_dssp EEEEET------------TSCEEECCTTSSSCBCBCCCT----------TCCSCEEEEEECTTSTTEEEEE---------
T ss_pred eeeecc------------CCceEEEECCCCceeeeeeec----------cccccccchhhhhcccceEEEe---------
Confidence 444422 237999999855432211111 1112346789999987655541
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCc
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDV 506 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~ 506 (954)
+..+.|.+|++ .++...+.+......+..++|+|||+.++++...++ .|+++|++++ +... +..+...+
T Consensus 246 ---~~d~~i~~wd~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~---~i~iwd~~~~--~~~~-~~~H~~~V 314 (357)
T 4g56_B 246 ---DETGNVSLVNI--KNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC---TVAVLDADFS--EVFR-DLSHRDFV 314 (357)
T ss_dssp ---ESSSCEEEEES--SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS---CEEEECTTSC--EEEE-ECCCSSCE
T ss_pred ---ecccceeEEEC--CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC---EEEEEECCCC--cEeE-ECCCCCCE
Confidence 23457889996 344445566666777889999999866544444433 2555677764 2222 22333334
Q ss_pred cCCCCCCCeeecc-CCcEEEEEE
Q 002194 507 YSDPGSPMMRRTS-TGTYVIAKI 528 (954)
Q Consensus 507 ~~~~~~~~~~~sp-dG~~l~~~~ 528 (954)
.. ++|+| ||++|+...
T Consensus 315 ~~------vafsP~d~~~l~s~s 331 (357)
T 4g56_B 315 TG------VAWSPLDHSKFTTVG 331 (357)
T ss_dssp EE------EEECSSSTTEEEEEE
T ss_pred EE------EEEeCCCCCEEEEEc
Confidence 44 88998 788887665
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.70 E-value=2.6e-15 Score=168.67 Aligned_cols=241 Identities=12% Similarity=0.075 Sum_probs=163.1
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCc
Q 002194 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (954)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~ 190 (954)
+..++|||||++|+++... + ..|++|++.+ ++.... +..+..
T Consensus 34 ~~~~~~s~dg~~l~~~~~~----------------------d----------~~i~v~d~~~----~~~~~~--~~~~~~ 75 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAH----------------------S----------NDVSIIDTAT----NNVIAT--VPAGSS 75 (391)
T ss_dssp EEEEEECTTSSEEEEEEGG----------------------G----------TEEEEEETTT----TEEEEE--EECSSS
T ss_pred cceEEECCCCCEEEEECCC----------------------C----------CeEEEEECCC----CeEEEE--EECCCC
Confidence 4578999999998776531 0 3799999854 333222 222236
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
+..++|||||++|+++.. ....|+++|+.+++.......... +..++|+|||+.|+++..
T Consensus 76 v~~~~~spdg~~l~~~~~--------~~~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~------- 135 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNM--------ASSTLSVIDTTSNTVAGTVKTGKS-----PLGLALSPDGKKLYVTNN------- 135 (391)
T ss_dssp EEEEEECTTSSEEEEEET--------TTTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEET-------
T ss_pred ccceEECCCCCEEEEEEC--------CCCEEEEEECCCCeEEEEEeCCCC-----cceEEECCCCCEEEEEeC-------
Confidence 788999999999988642 246799999999887666554432 568999999998876610
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCC-CccccccccCCCCcEEEE
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-PAVYTSLDPSPDEKYILI 348 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~-~~~~~~~~~SpDGk~l~~ 348 (954)
....|+++|+ +++...... ......++|+|||++|++
T Consensus 136 -----------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 136 -----------------------------------------GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp -----------------------------------------TTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEE
T ss_pred -----------------------------------------CCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEE
Confidence 2245888898 775444333 355678899999999977
Q ss_pred EeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002194 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (954)
Q Consensus 349 ~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (954)
+... .+.+++||+.+++........ ..+..++|+|||+.+++....
T Consensus 175 ~~~~------------~~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~--------- 220 (391)
T 1l0q_A 175 ANFD------------SMSISVIDTVTNSVIDTVKVE-------------AAPSGIAVNPEGTKAYVTNVD--------- 220 (391)
T ss_dssp EETT------------TTEEEEEETTTTEEEEEEECS-------------SEEEEEEECTTSSEEEEEEEC---------
T ss_pred EeCC------------CCEEEEEECCCCeEEEEEecC-------------CCccceEECCCCCEEEEEecC---------
Confidence 6533 237999999876654433221 234578999999977665210
Q ss_pred ccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 429 VTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 429 ~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
...+.|++|++ .+++..........+..++|+|||+.|+++...+ ..|+++|+.++
T Consensus 221 -~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~ 276 (391)
T 1l0q_A 221 -KYFNTVSMIDT---GTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATN 276 (391)
T ss_dssp -SSCCEEEEEET---TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTT
T ss_pred -cCCCcEEEEEC---CCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 13568999996 4444333333344466789999999998776544 35777888775
No 129
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.70 E-value=2.8e-16 Score=167.51 Aligned_cols=237 Identities=14% Similarity=0.147 Sum_probs=153.4
Q ss_pred CCceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcE
Q 002194 636 SLQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (954)
Q Consensus 636 ~~~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (954)
..+.+.+++.+. .|.++.++ |+|++ .|+||++||+.... ....|... ....+.+++.||+
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~-~~P~~--------~p~vvllHG~~~~~---------~~~~w~~~-~~~~~~~~~~~~~ 68 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVA-FLAGG--------PHAVYLLDAFNAGP---------DVSNWVTA-GNAMNTLAGKGIS 68 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-EECCS--------SSEEEEECCSSCCS---------SSCHHHHT-SCHHHHHTTSSSE
T ss_pred CCCEEEEEEECcccCCcceEE-EeCCC--------CCEEEEECCCCCCC---------Chhhhhhc-ccHHHHHhcCCeE
Confidence 345778888875 68899998 78864 27999999973100 00011000 0134556778999
Q ss_pred EEEcCCCCCCCCCCccc--chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEecc
Q 002194 715 ILGGPTTPIIGEGDEEA--NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (954)
Q Consensus 715 V~~~~~~~~~G~G~~~~--~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (954)
|+.++..+..++..... ...+.....+|+... +.++..+|+++++|+|+||||++|+.++.++|++|+++|+++|
T Consensus 69 vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg 145 (280)
T 1r88_A 69 VVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDW---LAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSG 145 (280)
T ss_dssp EEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHH---HHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred EEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHH---HHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECC
Confidence 99977744333321111 122323334454444 4443447888999999999999999999999999999999999
Q ss_pred CCCCCCCCC-C-----Ccc----ccchhhhc--HHHHHhcCcccccCCC---CCCEEEEE----eCCCCC-------CCC
Q 002194 793 AYNRTLTPF-G-----FQN----EDRTLWEA--TSTYVEMSPFMSANKL---KKPILLVH----GEEDNN-------SGT 846 (954)
Q Consensus 793 ~~~~~~~~~-~-----~~~----~~~~~~~~--~~~~~~~sp~~~~~~~---~~P~Lii~----G~~D~~-------v~~ 846 (954)
.++...... . ... .....|.. ...+...+|+..+.++ ..|+||+| |+.|.. ++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~- 224 (280)
T 1r88_A 146 FLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEA- 224 (280)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHH-
T ss_pred ccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHH-
Confidence 876422100 0 000 00001111 1234556777666555 57999999 999983 46
Q ss_pred chHHHHHHHHHHHhCC-CcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 847 LTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 847 ~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
..++++++++|+..| +++++.+|++++|.+.. ....+...+.||.+-+.
T Consensus 225 -~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~~---w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 225 -MGNSRMFYNQYRSVGGHNGHFDFPASGDNGWGS---WAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp -HHHHHHHHHHHHHTTCCSEEEECCSSCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHCCCcceEEEecCCCCcChhH---HHHHHHHHHHHHHHHHh
Confidence 889999999999999 99999999888998632 23445566677766553
No 130
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.70 E-value=5.3e-15 Score=167.79 Aligned_cols=278 Identities=9% Similarity=0.043 Sum_probs=172.1
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCc
Q 002194 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (954)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~ 190 (954)
...++|||||++|+....+ +.+++|++.. +..... +.....
T Consensus 59 ~~~~~~s~~g~~l~~~~~d---------------------------------~~v~i~d~~~----~~~~~~--~~~~~~ 99 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLD---------------------------------GHDFLFNTII----RDGSKM--LKRADY 99 (420)
T ss_dssp CTTCEEEEEETTEEEEEET---------------------------------TEEEEEECCS----EETTTT--SCSCCE
T ss_pred ccceeeeecCCeEEEEEcC---------------------------------CcEEEEEecc----cceeeE--EecCCc
Confidence 4578999999999998875 4789999853 221111 222234
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
.....|+|||+.|+.... ...|.++++++++........... +..++|+|||+.|+...
T Consensus 100 ~~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s-------- 158 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTT---------EGDIKVLDSNFNLQREIDQAHVSE----ITKLKFFPSGEALISSS-------- 158 (420)
T ss_dssp EEEEEECSSSCEEEEEET---------TSCEEEECTTSCEEEEETTSSSSC----EEEEEECTTSSEEEEEE--------
T ss_pred eEEEEEecCCCEEEEEEC---------CCCEEEEeCCCcceeeecccccCc----cEEEEECCCCCEEEEEe--------
Confidence 455679999999998652 456788888888776664333322 77899999999888761
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccccccCCCCcEEE
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYIL 347 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l~ 347 (954)
....|.++++ +++ ...+... ..+..++|+|||+.|+
T Consensus 159 -----------------------------------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 159 -----------------------------------------QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp -----------------------------------------TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred -----------------------------------------CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 1235778888 664 4445444 7788999999999999
Q ss_pred EEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCccc-C-Ccc---------ccccccCccceeeccCCCCceE
Q 002194 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAED-I-PIA---------FNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 348 ~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~-~-p~~---------~~~~~~g~~~~~wspDg~~i~~ 415 (954)
..+.+ +.+.+||+..++. ..+........ + ... .......+..++|+|||+.++.
T Consensus 198 s~~~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 198 SASLD-------------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEETT-------------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEcCC-------------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 87743 3799999986554 33332211100 0 000 0011234567889999987765
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe-ecccccCceeeccCCc-eEEEEEeccccceEEEEEcCCCCCC
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDDSL-ALVYESWYKTRRTRTWVISPGSKDV 493 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (954)
. ...+.|.+|++ ..+.....+. .+...+..++|+|+|+ .|+.. ..++ .|.++|+.++..
T Consensus 265 ~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g-~~dg---~i~vwd~~~~~~ 325 (420)
T 3vl1_A 265 G-------------HVSGVITVHNV--FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAG-YENG---MLAQWDLRSPEC 325 (420)
T ss_dssp E-------------ETTSCEEEEET--TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEE-ETTS---EEEEEETTCTTS
T ss_pred E-------------cCCCeEEEEEC--CCCceeEEcccccCCCceeEEEeCCCCCEEEEE-eCCC---eEEEEEcCCCcC
Confidence 5 33557899996 2333333332 2455678899999999 55554 3332 466667766522
Q ss_pred CcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 494 ~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
....+.......+. ..++++|++++...
T Consensus 326 ~~~~~~~~~~~~v~-------~~~~~~~~~l~s~~ 353 (420)
T 3vl1_A 326 PVGEFLINEGTPIN-------NVYFAAGALFVSSG 353 (420)
T ss_dssp CSEEEEESTTSCEE-------EEEEETTEEEEEET
T ss_pred chhhhhccCCCCce-------EEEeCCCCEEEEec
Confidence 22333322222222 23566777666543
No 131
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.70 E-value=9.2e-17 Score=170.86 Aligned_cols=225 Identities=13% Similarity=0.079 Sum_probs=143.2
Q ss_pred CceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHH-HHHCC--
Q 002194 637 LQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLL-WLARG-- 712 (954)
Q Consensus 637 ~~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-la~~G-- 712 (954)
...+.+++.+. .|.++.+++|+|+++++.+ ++|+|+++||++... ... .+ ...... .++.|
T Consensus 16 ~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~~~~~-----~~~----~~----~~~~~~~~~~~g~~ 80 (275)
T 2qm0_A 16 SNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGNAFFQ-----TFH----EA----VKIQSVRAEKTGVS 80 (275)
T ss_dssp TTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHHHHHH-----HHH----HH----HHHHGGGHHHHCCC
T ss_pred CCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecChHHHH-----HHH----HH----HHHHhhcchhcCCC
Confidence 35778888886 7899999999999987654 599999999963100 000 00 001111 23467
Q ss_pred -cEEEEcCCCCCCCC---------CCccc-------------chhhHHHHHHH-H-HHHHHHHHHcCCCCCCcEEEEeeC
Q 002194 713 -FAILGGPTTPIIGE---------GDEEA-------------NDRFVEQLVAC-A-EAAVEEVVRRGVAHPSKIAVGGHS 767 (954)
Q Consensus 713 -~~V~~~~~~~~~G~---------G~~~~-------------~~~~~~~~~~D-~-~~av~~l~~~~~~d~~ri~l~G~S 767 (954)
++|+.+++.+...+ +.... ........+.+ + .+.+.++.++..+|+++++|+|||
T Consensus 81 ~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S 160 (275)
T 2qm0_A 81 PAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHX 160 (275)
T ss_dssp CCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEET
T ss_pred CeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEec
Confidence 99998666442111 10000 00000111222 1 234556666666888999999999
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCc
Q 002194 768 YGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTL 847 (954)
Q Consensus 768 ~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~ 847 (954)
|||++|+.++.++|+.|+++++.+|.+.+. . .......+.+.... .......|++++||+.|..++
T Consensus 161 ~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~-------~--~~~~~~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~-- 226 (275)
T 2qm0_A 161 LGGLFALHILFTNLNAFQNYFISSPSIWWN-------N--KSVLEKEENLIIEL---NNAKFETGVFLTVGSLEREHM-- 226 (275)
T ss_dssp HHHHHHHHHHHHCGGGCSEEEEESCCTTHH-------H--HGGGGGTTHHHHHH---HTCSSCEEEEEEEETTSCHHH--
T ss_pred chhHHHHHHHHhCchhhceeEEeCceeeeC-------h--HHHHHHHHHHHhhh---cccCCCceEEEEeCCcccchh--
Confidence 999999999999999999999999874210 0 00001111111110 023456799999999999877
Q ss_pred hHHHHHHHHHH---HhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 848 TMQSDRFFNAL---KGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 848 ~~~~~~~~~~l---~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
..++++++++| +..|+++++.++|+++|+... ...+...++||
T Consensus 227 ~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~~----~~~l~~~l~~l 272 (275)
T 2qm0_A 227 VVGANELSERLLQVNHDKLKFKFYEAEGENHASVV----PTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTHH----HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcccCCceEEEEECCCCCccccH----HHHHHHHHHHH
Confidence 89999999999 567889999999999996531 22334455554
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=1.3e-14 Score=158.81 Aligned_cols=276 Identities=9% Similarity=-0.021 Sum_probs=166.5
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce-eecccCCCcc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDIY 241 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~ 241 (954)
..|.+|++.+ ++........ .... .++|||||++|+++.. +...|+++|+++++. .........
T Consensus 20 ~~v~~~d~~~----~~~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~- 84 (331)
T 3u4y_A 20 RRISFFSTDT----LEILNQITLG-YDFV-DTAITSDCSNVVVTSD--------FCQTLVQIETQLEPPKVVAIQEGQS- 84 (331)
T ss_dssp TEEEEEETTT----CCEEEEEECC-CCEE-EEEECSSSCEEEEEES--------TTCEEEEEECSSSSCEEEEEEECSS-
T ss_pred CeEEEEeCcc----cceeeeEEcc-CCcc-eEEEcCCCCEEEEEeC--------CCCeEEEEECCCCceeEEecccCCC-
Confidence 3789999854 3333222222 2245 8999999998887653 245999999998875 332222222
Q ss_pred ccccccc-eeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEE
Q 002194 242 LNAIFDN-FVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (954)
Q Consensus 242 ~~~~~~~-~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~ 320 (954)
... ++|+|||++|+.. . . .+ +...|++++
T Consensus 85 ----~~~~~~~s~dg~~l~~~-~---------------------~-----------------~~-------~~~~i~v~d 114 (331)
T 3u4y_A 85 ----SMADVDITPDDQFAVTV-T---------------------G-----------------LN-------HPFNMQSYS 114 (331)
T ss_dssp ----CCCCEEECTTSSEEEEC-C---------------------C-----------------SS-------SSCEEEEEE
T ss_pred ----CccceEECCCCCEEEEe-c---------------------C-----------------CC-------CcccEEEEE
Confidence 335 8999999999832 0 0 00 112688899
Q ss_pred e-CCceeEc-CCCccccccccCCCCcEEEEEeecCCcccccccCCCCcc-eEEEeccCc-eEEEeccCCCcccCCccccc
Q 002194 321 L-DGTVKEI-GPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQ-VGVWTTDGI-FVRELCDLPLAEDIPIAFNS 396 (954)
Q Consensus 321 ~-~G~~~~l-~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~-l~l~d~~g~-~~~~l~~~~~~~~~p~~~~~ 396 (954)
+ +++.... ........++|||||++|++..... .. +.+|+++.. .......... .
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~~---------~ 173 (331)
T 3u4y_A 115 FLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEFI---------S 173 (331)
T ss_dssp TTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEEE---------C
T ss_pred CCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCccc---------c
Confidence 8 6754443 3335567899999999988776432 25 888888732 2211100000 0
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc---eEEeecccccCceeeccCCceEEEE
Q 002194 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYE 473 (954)
Q Consensus 397 ~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~~~~~~~~~~spDg~~l~~~ 473 (954)
...++..++|+|||+.+++. . ...+.|++|++ .+++. .........+..++|+|||++|+++
T Consensus 174 ~~~~~~~~~~spdg~~l~v~-~-----------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVA-N-----------LIGNSIGILET---QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEE-E-----------TTTTEEEEEEC---SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEE
T ss_pred CCCCccceEECCCCCEEEEE-e-----------CCCCeEEEEEC---CCCcccceeeeccCCCCCceEEECCCCCEEEEE
Confidence 01234678999999976654 1 12457899996 44443 2223344556789999999988876
Q ss_pred EeccccceEEEEEcCCCCCCCcEEEe--cCC----CCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCC
Q 002194 474 SWYKTRRTRTWVISPGSKDVAPRILF--DRS----SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATP 547 (954)
Q Consensus 474 ~~~~~~~~~l~~~d~~~~~~~~~~l~--~~~----~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~ 547 (954)
...+ ..|+++|+.++ +...+. ... ..... ....+.|+|||++|++...
T Consensus 239 ~~~~---~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~v~~~------------------ 292 (331)
T 3u4y_A 239 TEST---VDVFNFNQLSG--TLSFVKSFGHGLLIDPRPLF---GANQMALNKTETKLFISAN------------------ 292 (331)
T ss_dssp CSSE---EEEEEEETTTT--EEEEEEEEECCCCCCCGGGT---TCCCEEECTTSSEEEEEET------------------
T ss_pred EcCC---CEEEEEECCCC--ceeeecccccccccCCCCcc---cccceEECCCCCEEEEecC------------------
Confidence 5432 45889998875 221121 111 00001 0112689999999887762
Q ss_pred CCCCCeEEEEECCCCCeEEE
Q 002194 548 EGNIPFLDLFDINTGSKERI 567 (954)
Q Consensus 548 ~~~~~~l~~~d~~~g~~~~l 567 (954)
+...|.+||+++.....+
T Consensus 293 --~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 293 --ISRELKVFTISGKVVGYV 310 (331)
T ss_dssp --TTTEEEEEETTSCEEEEC
T ss_pred --CCCcEEEEEecCCcccce
Confidence 123599999987665444
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.69 E-value=7.1e-15 Score=162.30 Aligned_cols=283 Identities=10% Similarity=-0.016 Sum_probs=175.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce-eeeecCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGFPDG 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~-~~lt~~~~~ 188 (954)
.+..++|||||++|++.... .... .....|++|+..+ ++. +.+. .+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~---------------------~~~~-----~~~~~v~~~d~~~----~~~~~~~~---~~ 88 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQ---------------------SRKL-----DKGGVVYRLDPVT----LEVTQAIH---ND 88 (353)
T ss_dssp SEEEEEEETTTTEEEEEECC---------------------CTTT-----EESEEEEEECTTT----CCEEEEEE---ES
T ss_pred CccceEECCCCCEEEEEcCC---------------------CcCC-----CCCccEEEEcCCC----CeEEEEEe---cC
Confidence 34578999999999776642 0000 0014789988753 332 2232 22
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc-----cccccceeEecCCeEEEEEec
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-----NAIFDNFVWVNNSTLLVCTIP 263 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~-----~~~~~~~~wspDG~~l~~~~~ 263 (954)
.....+.|+|||++|+++.. ....|+++|+++++.......+.... ......+.|+|||+.++++..
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNT--------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp SCCCSEEEETTTTEEEEEET--------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred CCcceEEECCCCCEEEEEec--------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec
Confidence 35678999999998887642 24589999999888754443322100 001346899999999887610
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCC-C-ccccccccC
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-P-AVYTSLDPS 340 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~-~-~~~~~~~~S 340 (954)
. ....|+++|+ +++...... . .....++||
T Consensus 161 ---------------------~--------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 161 ---------------------G--------------------------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp ---------------------S--------------------------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEE
T ss_pred ---------------------C--------------------------CCceEEEEcCCCCceEEEecCCCCccceEEEC
Confidence 0 1245889998 776544433 3 457789999
Q ss_pred CCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002194 341 PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (954)
Q Consensus 341 pDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~ 420 (954)
|||++|++... .+.+++||+.+++.......... +.......++|+|||+.+++. .
T Consensus 194 ~dg~~l~~~~~-------------~~~i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~-~-- 249 (353)
T 3vgz_A 194 SEGKRLYTTNA-------------DGELITIDTADNKILSRKKLLDD--------GKEHFFINISLDTARQRAFIT-D-- 249 (353)
T ss_dssp TTTTEEEEECT-------------TSEEEEEETTTTEEEEEEECCCS--------SSCCCEEEEEEETTTTEEEEE-E--
T ss_pred CCCCEEEEEcC-------------CCeEEEEECCCCeEEEEEEcCCC--------CCCcccceEEECCCCCEEEEE-e--
Confidence 99999888763 23789999987665433221110 001223468999999976544 1
Q ss_pred cCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec
Q 002194 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (954)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~ 500 (954)
...+.|++++. .+++......... ...++|+|||++|+++...+ ..|+++|+.++ +......
T Consensus 250 ---------~~~~~v~~~d~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~~--~~~~~~~ 311 (353)
T 3vgz_A 250 ---------SKAAEVLVVDT---RNGNILAKVAAPE-SLAVLFNPARNEAYVTHRQA---GKVSVIDAKSY--KVVKTFD 311 (353)
T ss_dssp ---------SSSSEEEEEET---TTCCEEEEEECSS-CCCEEEETTTTEEEEEETTT---TEEEEEETTTT--EEEEEEE
T ss_pred ---------CCCCEEEEEEC---CCCcEEEEEEcCC-CceEEECCCCCEEEEEECCC---CeEEEEECCCC--eEEEEEe
Confidence 12458999996 4444433322222 35699999999887775443 46888998875 2222222
Q ss_pred CCCCCccCCCCCCCeeeccCCcEEEEEEe
Q 002194 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (954)
Q Consensus 501 ~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 529 (954)
... .... ++|+|||++|+....
T Consensus 312 ~~~-~~~~------~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 312 TPT-HPNS------LALSADGKTLYVSVK 333 (353)
T ss_dssp CCS-EEEE------EEECTTSCEEEEEEE
T ss_pred cCC-CCCe------EEEcCCCCEEEEEEc
Confidence 211 1122 789999998887764
No 134
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.69 E-value=1.1e-16 Score=184.97 Aligned_cols=248 Identities=13% Similarity=0.136 Sum_probs=160.1
Q ss_pred CceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccc------cCC--CCCCCCcccHHHHHH
Q 002194 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQV------RGS--PNEFPRIGSTSVLLW 708 (954)
Q Consensus 637 ~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~l 708 (954)
+..+.+.++..||.+|.+.+|+|++ .+++|+||+.||...........+ .+. ...+..+....++.|
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 113 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFW 113 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHH
T ss_pred EEEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHH
Confidence 4467899999999999999999975 246999999987432210000000 000 000110101136789
Q ss_pred HHCCcEEEEcCCCCCCCCCCcccc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEE
Q 002194 709 LARGFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (954)
Q Consensus 709 a~~G~~V~~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (954)
+++||+|+..+. +|+|.+.+. ..+.....+|+.++++||.+++.+| .||+++|+||||++++.+|+..|+.++|+
T Consensus 114 a~~Gy~vv~~D~---RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ai 189 (560)
T 3iii_A 114 VPNDYVVVKVAL---RGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAM 189 (560)
T ss_dssp GGGTCEEEEEEC---TTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEE
T ss_pred HhCCCEEEEEcC---CCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEE
Confidence 999999999555 455555432 2334578999999999999998877 89999999999999999999999999999
Q ss_pred EEeccCCCCCC---CCCCCcccc-chhh----------------------h--cH-HHHHhcCcccccCCCCCCEEEEEe
Q 002194 788 IARSGAYNRTL---TPFGFQNED-RTLW----------------------E--AT-STYVEMSPFMSANKLKKPILLVHG 838 (954)
Q Consensus 788 v~~~~~~~~~~---~~~~~~~~~-~~~~----------------------~--~~-~~~~~~sp~~~~~~~~~P~Lii~G 838 (954)
|+.+|+.|... ..-+..... ...| + .. +.|...++ .+++|++|+|+++|
T Consensus 190 v~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I~vPvl~v~G 267 (560)
T 3iii_A 190 IPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQIKTPLLTCAS 267 (560)
T ss_dssp EEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGCCSCEEEEEE
T ss_pred EecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhCCCCEEEeCC
Confidence 99999877321 000000000 0001 0 00 12222233 57889999999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcccCC
Q 002194 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
-.|..+. ...+.+.|++++..+ +.+.+.++ +|+.. .......+.+++||++||+...
T Consensus 268 w~D~~~~--~~g~l~~y~~l~~~~--k~l~ih~~-~~~~~--~~~~~~~~~~~~wfD~~LkG~~ 324 (560)
T 3iii_A 268 WSTQGLH--NRGSFEGFKQAASEE--KWLYVHGR-KEWES--YYARENLERQKSFFDFYLKEEN 324 (560)
T ss_dssp GGGTTTT--HHHHHHHHHHCCCSS--EEEEEESS-CHHHH--HHSHHHHHHHHHHHHHHTSCCC
T ss_pred cCCCccc--chhHHHHHHhccccC--cEEEECCC-CCcCc--ccChhHHHHHHHHHHHHhCCCC
Confidence 9997554 677778888776443 34544332 23210 0012456788999999998654
No 135
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.69 E-value=1.1e-15 Score=162.59 Aligned_cols=218 Identities=10% Similarity=0.144 Sum_probs=140.2
Q ss_pred EEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC
Q 002194 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (954)
+...+|..+ .+|.|++ ++.|+||++|||.|..++. ..+ .......+++.||.|+.++|+..
T Consensus 9 ~~~~~~~~~--~~y~p~~------~~~p~iv~~HGGg~~~g~~--------~~~---~~~~~~~l~~~g~~Vi~vdYrla 69 (274)
T 2qru_A 9 QTLANGATV--TIYPTTT------EPTNYVVYLHGGGMIYGTK--------SDL---PEELKELFTSNGYTVLALDYLLA 69 (274)
T ss_dssp EECTTSCEE--EEECCSS------SSCEEEEEECCSTTTSCCG--------GGC---CHHHHHHHHTTTEEEEEECCCCT
T ss_pred ccccCCeeE--EEEcCCC------CCCcEEEEEeCccccCCCh--------hhc---hHHHHHHHHHCCCEEEEeCCCCC
Confidence 344466544 6787753 2479999999986543321 111 12344556778999999777632
Q ss_pred CCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH---hCCCcccEEEEeccCCCCCCCC
Q 002194 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA---HAPHLFCCGIARSGAYNRTLTP 800 (954)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~~~~~~~~~~ 800 (954)
+...++..++|+.++++|+.++.. ++++|+|+|+|+||++|+.++. ..+.+++++|+++|..+.....
T Consensus 70 --------Pe~~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~ 140 (274)
T 2qru_A 70 --------PNTKIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIK 140 (274)
T ss_dssp --------TTSCHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGG
T ss_pred --------CCCCCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccC
Confidence 223567889999999999998743 2689999999999999999987 3467789999888876521100
Q ss_pred C----CCc---c---------c--cchhhhc-H------------HHHHhc--------Cccc--ccCCCCCCEEEEEeC
Q 002194 801 F----GFQ---N---------E--DRTLWEA-T------------STYVEM--------SPFM--SANKLKKPILLVHGE 839 (954)
Q Consensus 801 ~----~~~---~---------~--~~~~~~~-~------------~~~~~~--------sp~~--~~~~~~~P~Lii~G~ 839 (954)
. .+. . . ....+.. . ..+... .++. .+.++ .|+||++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~ 219 (274)
T 2qru_A 141 EPRKLLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASS 219 (274)
T ss_dssp SCCCSCSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEET
T ss_pred CchhhccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEec
Confidence 0 000 0 0 0000000 0 001000 0010 12345 799999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc---ccHHHHHHHHHHHHHH
Q 002194 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR---ESIMHVLWETDRWLQK 896 (954)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~ 896 (954)
.|..++ ..+++++.+++. +++++++++++|++... ....++.+.+.+||++
T Consensus 220 ~D~~~~--~~~~~~l~~~~~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 220 SDEEVP--FRYSKKIGRTIP----ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp TCSSSC--THHHHHHHHHST----TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCcC--HHHHHHHHHhCC----CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 999988 788877776553 46999999999998422 2234667888888875
No 136
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.69 E-value=1.5e-16 Score=178.54 Aligned_cols=222 Identities=12% Similarity=0.100 Sum_probs=138.0
Q ss_pred cCCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCC----CCCCCCcccHHHHHHH
Q 002194 634 LASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGS----PNEFPRIGSTSVLLWL 709 (954)
Q Consensus 634 ~~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~la 709 (954)
...+..+.+++++.+|.++++++++|++. +++.|+||++||+........+ ..+. ...|.......++.|+
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vv~~HG~g~~~~~~~~-~~g~~~~~~~~y~~~~~~~a~~la 161 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI----NKPVPAILCIPGSGGNKEGLAG-EPGIAPKLNDRYKDPKLTQALNFV 161 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC----CSCEEEEEEECCTTCCHHHHHT-CCCSSSTTCCSTTCTTTCHHHHHH
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC----CCCccEEEEEcCCCCCcccccc-cccccccccccccchHHHHHHHHH
Confidence 34456788999999999999999999863 3469999999997432110000 0000 0011100013678899
Q ss_pred HCCcEEEEcCCCCCCCCCCccc----------------------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeC
Q 002194 710 ARGFAILGGPTTPIIGEGDEEA----------------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHS 767 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~----------------------~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S 767 (954)
++||+|++++++ |+|.+.. ...+....+.|+.++++||.+++.+|++||+|+|||
T Consensus 162 ~~Gy~Vl~~D~r---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S 238 (398)
T 3nuz_A 162 KEGYIAVAVDNP---AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFS 238 (398)
T ss_dssp TTTCEEEEECCT---TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEG
T ss_pred HCCCEEEEecCC---CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEC
Confidence 999999996554 4444421 112334456899999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCcccEEEEeccCCCCCC-----CC---C---CCccccchhhhcHHHHHhcCcccccCC-CCCCEEE
Q 002194 768 YGAFMTANLLAHAPHLFCCGIARSGAYNRTL-----TP---F---GFQNEDRTLWEATSTYVEMSPFMSANK-LKKPILL 835 (954)
Q Consensus 768 ~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~-----~~---~---~~~~~~~~~~~~~~~~~~~sp~~~~~~-~~~P~Li 835 (954)
|||++|+.+++.. ++++|+|+.+++..... .. . .+....... .+..+...+....+.. ...|+||
T Consensus 239 ~GG~~a~~~aa~~-~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~ap~PlLi 315 (398)
T 3nuz_A 239 LGTEPMMVLGTLD-TSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHL--IPDFWKNFNFPDIVAALAPRPIIL 315 (398)
T ss_dssp GGHHHHHHHHHHC-TTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGC--CTTHHHHCCHHHHHHHTTTSCEEE
T ss_pred HhHHHHHHHHhcC-CcEEEEEEecccccchhhhhhhccccccccccCCccHHHh--cchHhhhCCHHHHHHhhCCCcEEE
Confidence 9999999998887 57899988765433100 00 0 000000000 0001111121111111 2469999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeC
Q 002194 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILP 871 (954)
Q Consensus 836 i~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 871 (954)
+||+.|.. ..+.+++++++.. ..++++++||
T Consensus 316 i~G~~D~~----v~~~~~~y~~~g~-~~~~~~~~~p 346 (398)
T 3nuz_A 316 TEGGLDRD----LDLVRKAYAIVGT-PDNVKIYHYK 346 (398)
T ss_dssp CSCBCHHH----HHHHHHHHHHHTC-TTSEEECCCG
T ss_pred eeCCchHH----HHHHHHHHHHcCC-CcceEEEEeC
Confidence 99999954 5667777776643 2567887777
No 137
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.68 E-value=1.8e-15 Score=163.16 Aligned_cols=229 Identities=11% Similarity=0.082 Sum_probs=143.2
Q ss_pred eEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEc
Q 002194 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (954)
Q Consensus 639 ~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (954)
.+...+...+|.+++++.+.|++-.+ .+.|+||++||..... ..| ...+..|+++||.|++
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~~~---~~~~~VvllHG~g~~~-----------~~~----~~~~~~L~~~G~~Vi~- 67 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKENVP---FKNNTILIASGFARRM-----------DHF----AGLAEYLSTNGFHVFR- 67 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSC---CCSCEEEEECTTCGGG-----------GGG----HHHHHHHHTTTCCEEE-
T ss_pred ceEEEEEcCCCCEEEEEEecCcccCC---CCCCEEEEecCCccCc-----------hHH----HHHHHHHHHCCCEEEE-
Confidence 35566788899999999988753111 1358899999953110 011 2456678889999999
Q ss_pred CCCCCCCC-CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCC
Q 002194 719 PTTPIIGE-GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (954)
Q Consensus 719 ~~~~~~G~-G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (954)
+|.+|+ |.+... ........+|+.++++++.+.+ .++++++||||||.+|+.++.+ | +++++|+.++..+
T Consensus 68 --~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~ 140 (305)
T 1tht_A 68 --YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVN 140 (305)
T ss_dssp --ECCCBCC--------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSC
T ss_pred --eeCCCCCCCCCCcccceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchh
Confidence 566676 766442 1224566789999999997543 4689999999999999999988 6 7999998877533
Q ss_pred CCC-----CCCCC---c----ccc-chh-h-hcHHHH----Hhc------CcccccCCCCCCEEEEEeCCCCCCCCchHH
Q 002194 796 RTL-----TPFGF---Q----NED-RTL-W-EATSTY----VEM------SPFMSANKLKKPILLVHGEEDNNSGTLTMQ 850 (954)
Q Consensus 796 ~~~-----~~~~~---~----~~~-~~~-~-~~~~~~----~~~------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~ 850 (954)
... ....+ . ... ... . .....+ ... +....+.++++|+|++||++|..+| +..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp--~~~ 218 (305)
T 1tht_A 141 LRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEE 218 (305)
T ss_dssp HHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HHH
T ss_pred HHHHHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccC--HHH
Confidence 100 00000 0 000 000 0 000111 111 1234567899999999999999998 888
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCcCCCcc-cHHHHHHHHHHHHHHh
Q 002194 851 SDRFFNALKGHGALCRLVILPFESHGYAARE-SIMHVLWETDRWLQKY 897 (954)
Q Consensus 851 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~~~ 897 (954)
++++++.+.. .+++++++|++||.+.... ....+++.+.+|....
T Consensus 219 ~~~l~~~i~~--~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~~ 264 (305)
T 1tht_A 219 VYDMLAHIRT--GHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIAM 264 (305)
T ss_dssp HHHHHTTCTT--CCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--CCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHHh
Confidence 8877765432 3479999999999974211 1223445555555444
No 138
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.1e-15 Score=172.95 Aligned_cols=306 Identities=9% Similarity=0.105 Sum_probs=176.9
Q ss_pred hcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce-eeeec
Q 002194 106 VDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQG 184 (954)
Q Consensus 106 ~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~-~~lt~ 184 (954)
...+.+..++|||||+.++++... .+......+.++.|++|++.. +.. +.+..
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~----------------------~g~~~~~~~~d~~v~iw~~~~----~~~~~~~~~ 63 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTV----------------------SGTVDANFSTDSSLELWSLLA----ADSEKPIAS 63 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCB----------------------SSCCCSSCCCCCCCEEEESSS----GGGCSCSCC
T ss_pred hhhhhcceEeeCCCCCCEEEEEec----------------------CcccccccCCCCeEEEEEccC----CCCCcEEEE
Confidence 344467889999999944444421 000000011124789999854 221 12222
Q ss_pred CCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCC----C-ceeecccCCCccccccccceeEecC-CeEE
Q 002194 185 FPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT----G-KARPLFQSPDIYLNAIFDNFVWVNN-STLL 258 (954)
Q Consensus 185 ~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~----g-~~~~lt~~~~~~~~~~~~~~~wspD-G~~l 258 (954)
+.....+..+.|||||+.|+.... ...|.++++.+ . ....+..+.. .+..+.|+|| +++|
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~---------dg~v~vw~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l 129 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALD---------NGSLELYSTNEANNAINSMARFSNHSS-----SVKTVKFNAKQDNVL 129 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEES---------SSCEEEECCSSTTSCCCEEEECCCSSS-----CCCEEEECSSSTTBE
T ss_pred EecCCceEEEEECCCCCeEEEEcc---------CCeEEEeecccccccccchhhccCCcc-----ceEEEEEcCCCCCEE
Confidence 333347889999999999988652 34566666665 2 2233332222 2778999999 7777
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-------eeEc--
Q 002194 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-------VKEI-- 328 (954)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-------~~~l-- 328 (954)
+... ....|.++++ +++ ...+
T Consensus 130 ~s~~-------------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 130 ASGG-------------------------------------------------NNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp EEEC-------------------------------------------------SSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred EEEc-------------------------------------------------CCCeEEEEECCCCcccccccccccccc
Confidence 7651 1123556666 443 1111
Q ss_pred -CCC-ccccccccCCCC-cEEEEEeecCCcccccccCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccce
Q 002194 329 -GPP-AVYTSLDPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSI 404 (954)
Q Consensus 329 -~~~-~~~~~~~~SpDG-k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~ 404 (954)
... ..+..++|+||| +.|+..+. ++.+.+||++.++.. .+...... .+....+..+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~v~iwd~~~~~~~~~~~~~~~~-------~~~~~~v~~~ 220 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGS-------------SNFASIWDLKAKKEVIHLSYTSPN-------SGIKQQLSVV 220 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESS-------------SSCEEEEETTTTEEEEEECCCCCS-------SCCCCCEEEE
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcC-------------CCCEEEEECCCCCcceEEeccccc-------cccCCceEEE
Confidence 122 667889999994 55555542 238999999876543 33321100 0112345779
Q ss_pred eeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC-ceEEe-ecccccCceeecc-CCceEEEEEeccccce
Q 002194 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILH-KLDLRYGGISWCD-DSLALVYESWYKTRRT 481 (954)
Q Consensus 405 ~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~-~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~ 481 (954)
+|+|||+.+++..... .....|.+|++ ..+.. ...+. .+...+..++|+| |++.|+....++
T Consensus 221 ~~~~~~~~~l~~~~~d---------~~~~~i~~~d~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg---- 285 (416)
T 2pm9_A 221 EWHPKNSTRVATATGS---------DNDPSILIWDL--RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN---- 285 (416)
T ss_dssp EECSSCTTEEEEEECC---------SSSCCCCEEET--TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS----
T ss_pred EECCCCCCEEEEEECC---------CCCceEEEEeC--CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC----
Confidence 9999997665552110 01127888886 23223 34444 5667788899999 888888776443
Q ss_pred EEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCC-cEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECC
Q 002194 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTG-TYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN 560 (954)
Q Consensus 482 ~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 560 (954)
.|.++++.++ +.......+...+.. +.|+||| +.++... ....|.+||+.
T Consensus 286 ~v~~wd~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~---------------------~d~~i~iw~~~ 336 (416)
T 2pm9_A 286 TVLLWNPESA--EQLSQFPARGNWCFK------TKFAPEAPDLFACAS---------------------FDNKIEVQTLQ 336 (416)
T ss_dssp EEEEECSSSC--CEEEEEECSSSCCCC------EEECTTCTTEEEECC---------------------SSSEEEEEESC
T ss_pred CEEEeeCCCC--ccceeecCCCCceEE------EEECCCCCCEEEEEe---------------------cCCcEEEEEcc
Confidence 4666777764 333333333333333 8999999 5665544 12348888887
Q ss_pred CCCe
Q 002194 561 TGSK 564 (954)
Q Consensus 561 ~g~~ 564 (954)
+++.
T Consensus 337 ~~~~ 340 (416)
T 2pm9_A 337 NLTN 340 (416)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6653
No 139
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.68 E-value=1.8e-14 Score=164.18 Aligned_cols=306 Identities=11% Similarity=0.025 Sum_probs=185.4
Q ss_pred CCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCC-ccccccccceeEecCCeEEEEEecCCC
Q 002194 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 188 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
+..+..++|+| ++.++++.. ....|+++|+++++..+...... ......+..++|+|||+.++...
T Consensus 122 ~~~~~~~~~s~-~~~~~~~~~--------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~---- 188 (433)
T 3bws_A 122 GFQPKSVRFID-NTRLAIPLL--------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM---- 188 (433)
T ss_dssp SSCBCCCEESS-SSEEEEEBT--------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG----
T ss_pred CCCceEEEEeC-CCeEEEEeC--------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC----
Confidence 34566899999 556766542 23468999999888766433211 00111256789999998777550
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCC
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDE 343 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDG 343 (954)
....|+++++ +++. ..+... ..+..++|+|||
T Consensus 189 ---------------------------------------------~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (433)
T 3bws_A 189 ---------------------------------------------QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIR 223 (433)
T ss_dssp ---------------------------------------------GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTT
T ss_pred ---------------------------------------------CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCC
Confidence 2245788888 6643 334333 567789999999
Q ss_pred cEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002194 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (954)
Q Consensus 344 k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~ 423 (954)
++++++... .+.|++||+++++........ ..+..++|+|||+.+++.......
T Consensus 224 ~~l~~~~~~------------~~~i~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~~~~- 277 (433)
T 3bws_A 224 DLVYCSNWI------------SEDISVIDRKTKLEIRKTDKI-------------GLPRGLLLSKDGKELYIAQFSASN- 277 (433)
T ss_dssp TEEEEEETT------------TTEEEEEETTTTEEEEECCCC-------------SEEEEEEECTTSSEEEEEEEESCT-
T ss_pred CEEEEEecC------------CCcEEEEECCCCcEEEEecCC-------------CCceEEEEcCCCCEEEEEECCCCc-
Confidence 999877632 238999999866543322211 234678999999977665221110
Q ss_pred CccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCC
Q 002194 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS 503 (954)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 503 (954)
. ....+.|++|++ .+++..........+..++|+|||+.|++....+ ..|++++++++ +....... .
T Consensus 278 -~---~~~dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~---~~v~v~d~~~~--~~~~~~~~-~ 344 (433)
T 3bws_A 278 -Q---ESGGGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC---SKIEVYDLKEK--KVQKSIPV-F 344 (433)
T ss_dssp -T---CSCCEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT---TEEEEEETTTT--EEEEEEEC-S
T ss_pred -c---ccCCCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEecCC---CEEEEEECCCC--cEEEEecC-C
Confidence 0 013558999996 4444444444444667899999999988876554 35777888764 22222221 1
Q ss_pred CCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEec
Q 002194 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALM 583 (954)
Q Consensus 504 ~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 583 (954)
..+.. +.|+|||++++......+......+.. .+....|++||+++++.......... +.
T Consensus 345 ~~~~~------~~~s~dg~~l~~~~~~~~~~~~~~~~~------g~~dg~v~~~d~~~~~~~~~~~~~~~-----~~--- 404 (433)
T 3bws_A 345 DKPNT------IALSPDGKYLYVSCRGPNHPTEGYLKK------GLVLGKVYVIDTTTDTVKEFWEAGNQ-----PT--- 404 (433)
T ss_dssp SSEEE------EEECTTSSEEEEEECCCCCTTTCTTSC------CSSCCEEEEEETTTTEEEEEEECSSS-----EE---
T ss_pred CCCCe------EEEcCCCCEEEEEecCCCccccccccc------cccceEEEEEECCCCcEEEEecCCCC-----Cc---
Confidence 22222 789999998888763211000000000 01134699999999887766554321 11
Q ss_pred cCCccccccccCCEEEEEEecCCCCceEEEEECC
Q 002194 584 SDQTEGDLYLNQLKILTSKESKTENTQYYIQSWP 617 (954)
Q Consensus 584 ~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~ 617 (954)
..+|+|||+.+++.... ...++++++.
T Consensus 405 ----~~~~s~dg~~l~~~~~~---d~~i~v~~~~ 431 (433)
T 3bws_A 405 ----GLDVSPDNRYLVISDFL---DHQIRVYRRD 431 (433)
T ss_dssp ----EEEECTTSCEEEEEETT---TTEEEEEEET
T ss_pred ----eEEEcCCCCEEEEEECC---CCeEEEEEec
Confidence 25689999888765432 2467777753
No 140
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.68 E-value=1e-14 Score=160.57 Aligned_cols=263 Identities=10% Similarity=0.073 Sum_probs=170.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+..+.+ +.|.+|++.. + .....+.. ...
T Consensus 57 ~v~~~~~s~d~~~l~s~s~D---------------------------------g~v~iWd~~~-~--~~~~~~~~--~~~ 98 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQD---------------------------------GKLIIWDSYT-T--NKVHAIPL--RSS 98 (340)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------TEEEEEETTT-C--CEEEEEEC--SSS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CcEEEEECCC-C--CcceEeec--CCc
Confidence 46678999999999998876 5799999854 2 22233332 223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce-----eecccCCCccccccccceeEecCCeEEEEEecC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-----RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (954)
.+....|+|||+.|+.... ...+.++++.+++. +.+..+.. .+..+.|+++++++...
T Consensus 99 ~v~~~~~s~~~~~l~s~~~---------d~~v~iw~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~l~s~s--- 161 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGL---------DNICSIYNLKTREGNVRVSRELAGHTG-----YLSCCRFLDDNQIVTSS--- 161 (340)
T ss_dssp CEEEEEECTTSSEEEEEET---------TCEEEEEETTTCSBSCEEEEEEECCSS-----CEEEEEEEETTEEEEEE---
T ss_pred cEEEEEECCCCCEEEEEeC---------CCeEEEEECccCCCcceeEEEecCCCc-----cEEEEEECCCCcEEEEE---
Confidence 6788999999999887542 45667777765431 11222222 26678899999844332
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCC
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSP 341 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~Sp 341 (954)
....|.++|+ +++. ..+... +.+..++|+|
T Consensus 162 -----------------------------------------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 162 -----------------------------------------------GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp -----------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred -----------------------------------------------CCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 2234777788 6653 344444 7788999999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~ 420 (954)
||+.|+..+.+ +.+.+||+..+. ...+..+ ...+..++|+|||+.++..
T Consensus 195 ~~~~l~sg~~d-------------~~v~~wd~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~l~s~---- 244 (340)
T 1got_B 195 DTRLFVSGACD-------------ASAKLWDVREGMCRQTFTGH-------------ESDINAICFFPNGNAFATG---- 244 (340)
T ss_dssp TSSEEEEEETT-------------SCEEEEETTTCSEEEEECCC-------------SSCEEEEEECTTSSEEEEE----
T ss_pred CCCEEEEEeCC-------------CcEEEEECCCCeeEEEEcCC-------------cCCEEEEEEcCCCCEEEEE----
Confidence 99998887743 389999998554 3333322 1345689999999876554
Q ss_pred cCCCccccccCCCeEEEEecCCCCCCCceEEeecc---cccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002194 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (954)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~---~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (954)
+..+.|.+|++ ..++........ ..+..++|+|||+.|+....+. .|.++|..++ ....
T Consensus 245 ---------s~d~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~----~i~vwd~~~~--~~~~ 306 (340)
T 1got_B 245 ---------SDDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF----NCNVWDALKA--DRAG 306 (340)
T ss_dssp ---------ETTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC--CEEE
T ss_pred ---------cCCCcEEEEEC---CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC----eEEEEEcccC--cEee
Confidence 34557889996 333322222222 2456789999999988876543 3555666554 3333
Q ss_pred EecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 498 LFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 498 l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
....+...+.. +.|+|||++|+...
T Consensus 307 ~~~~h~~~v~~------~~~s~dg~~l~s~s 331 (340)
T 1got_B 307 VLAGHDNRVSC------LGVTDDGMAVATGS 331 (340)
T ss_dssp EEECCSSCEEE------EEECTTSSCEEEEE
T ss_pred EeecCCCcEEE------EEEcCCCCEEEEEc
Confidence 33444444443 78999999988776
No 141
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.68 E-value=3.7e-16 Score=175.03 Aligned_cols=153 Identities=8% Similarity=0.047 Sum_probs=106.7
Q ss_pred CCCceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCC---CCCCCCcccHHHHHHHHC
Q 002194 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGS---PNEFPRIGSTSVLLWLAR 711 (954)
Q Consensus 635 ~~~~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~la~~ 711 (954)
..+..+.+++++.+|..+++++++|++. +++.|+||++||+........+..... ...+......++..|+++
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~ 158 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL----KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKE 158 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC----CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTT
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC----CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHC
Confidence 4466788999999999999999999763 345899999999643211000000000 000110011467889999
Q ss_pred CcEEEEcCCCCCCCCCCcccch----------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChH
Q 002194 712 GFAILGGPTTPIIGEGDEEAND----------------------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYG 769 (954)
Q Consensus 712 G~~V~~~~~~~~~G~G~~~~~~----------------------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~G 769 (954)
||+|+++++ +|+|.+.... .+....+.|+.+++++|.+++.+|++||+|+|+|||
T Consensus 159 G~~Vl~~D~---rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~G 235 (391)
T 3g8y_A 159 GYVAVAVDN---AAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLG 235 (391)
T ss_dssp TCEEEECCC---TTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGG
T ss_pred CCEEEEecC---CCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChh
Confidence 999999554 4555543210 112233589999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEeccCCC
Q 002194 770 AFMTANLLAHAPHLFCCGIARSGAYN 795 (954)
Q Consensus 770 G~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (954)
|++|+.+++.. ++++++|+.+++..
T Consensus 236 G~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 236 TEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred HHHHHHHHHcC-CceeEEEEccCCCC
Confidence 99999998887 67999998877654
No 142
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.68 E-value=8.4e-16 Score=168.02 Aligned_cols=127 Identities=16% Similarity=0.145 Sum_probs=100.2
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCc
Q 002194 743 AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSP 822 (954)
Q Consensus 743 ~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 822 (954)
+.+++..+.+.. .++.++|||+||.+++.++.++|++++++|+++|... ..+
T Consensus 186 ~~~~l~~l~~~~----~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------~~~ 237 (328)
T 1qlw_A 186 TVANLSKLAIKL----DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------PKP 237 (328)
T ss_dssp HHHHHHHHHHHH----TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------CCG
T ss_pred HHHHHHHHHHHh----CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------CCH
Confidence 344444554432 2899999999999999999999999999999987531 011
Q ss_pred ccccCCCCCCEEEEEeCCCCCCCCch-----HHHHHHHHHHHhCCCcEEEEEeCCCC-----CcCCCcccHHHHHHHHHH
Q 002194 823 FMSANKLKKPILLVHGEEDNNSGTLT-----MQSDRFFNALKGHGALCRLVILPFES-----HGYAARESIMHVLWETDR 892 (954)
Q Consensus 823 ~~~~~~~~~P~Lii~G~~D~~v~~~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~-----H~~~~~~~~~~~~~~i~~ 892 (954)
......+++|+|++||++|..+| . ++++++++.++..|.+++++++|++| |.+....+..++.+.+.+
T Consensus 238 ~~~~~~~~~PvLii~G~~D~~~p--~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~ 315 (328)
T 1qlw_A 238 EDVKPLTSIPVLVVFGDHIEEFP--RWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILD 315 (328)
T ss_dssp GGCGGGTTSCEEEEECSSCTTCT--TTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHH
T ss_pred HHHhhccCCCEEEEeccCCcccc--chhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHH
Confidence 11122356899999999999998 7 88999999999999999999999665 987655557889999999
Q ss_pred HHHHhcc
Q 002194 893 WLQKYCV 899 (954)
Q Consensus 893 fl~~~l~ 899 (954)
||++++.
T Consensus 316 fl~~~~~ 322 (328)
T 1qlw_A 316 WIGRNTA 322 (328)
T ss_dssp HHHHTCC
T ss_pred HHHhccc
Confidence 9999864
No 143
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.67 E-value=2.3e-15 Score=159.72 Aligned_cols=213 Identities=15% Similarity=0.143 Sum_probs=136.4
Q ss_pred EEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCC
Q 002194 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (954)
Q Consensus 643 ~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (954)
++...||.+++...+- + -|.||++||.+.... .| ......|+++||.|++ ++
T Consensus 2 ~~~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~~~-----------~w----~~~~~~l~~~g~~vi~---~D 53 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG--------S--GKPVLFSHGWLLDAD-----------MW----EYQMEYLSSRGYRTIA---FD 53 (271)
T ss_dssp EEECTTSCEEEEEEES--------S--SSEEEEECCTTCCGG-----------GG----HHHHHHHHTTTCEEEE---EC
T ss_pred eEEcCCCCEEEEEccC--------C--CCeEEEECCCCCcHH-----------HH----HHHHHHHHhCCceEEE---ec
Confidence 3567899998776652 1 245888999642110 11 1345567789999999 66
Q ss_pred CCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh-CCCcccEEEEeccCCCCCC-
Q 002194 723 IIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTL- 798 (954)
Q Consensus 723 ~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~~- 798 (954)
.+|+|.+..+ ........+|+.+.++.+ +.+++.++||||||.+++.+++. .|++++++|++++......
T Consensus 54 ~~G~G~S~~~~~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~ 127 (271)
T 3ia2_A 54 RRGFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127 (271)
T ss_dssp CTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBC
T ss_pred CCCCccCCCCCCCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccC
Confidence 6788887543 233456677877777765 34689999999999977666555 4889999999876432110
Q ss_pred ---CCCCCcccc-----chhhhc--------------------------------------------HHHHHhcCccccc
Q 002194 799 ---TPFGFQNED-----RTLWEA--------------------------------------------TSTYVEMSPFMSA 826 (954)
Q Consensus 799 ---~~~~~~~~~-----~~~~~~--------------------------------------------~~~~~~~sp~~~~ 826 (954)
.+....... ...... ...+...+....+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (271)
T 3ia2_A 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDM 207 (271)
T ss_dssp BTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHH
T ss_pred CCCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccc
Confidence 000000000 000000 0001111222345
Q ss_pred CCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
.++++|+|++||++|.++| ++.+.+++..+.. ..++.++|++||.+. .+..+.+.+.+.+||.
T Consensus 208 ~~i~~P~Lvi~G~~D~~~p--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 208 AKIDVPTLVIHGDGDQIVP--FETTGKVAAELIK---GAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK 270 (271)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHST---TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEEeCCCCcCC--hHHHHHHHHHhCC---CceEEEEcCCCCccc-ccCHHHHHHHHHHHhh
Confidence 7889999999999999998 7775555554422 368999999999874 5667788888888875
No 144
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.67 E-value=8.3e-16 Score=162.00 Aligned_cols=187 Identities=14% Similarity=0.141 Sum_probs=131.0
Q ss_pred EEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch
Q 002194 654 ATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND 733 (954)
Q Consensus 654 ~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~ 733 (954)
+.+|+|+....+ .++.|+||++||+.... ......+..|+++||.|+.+++++. +.
T Consensus 34 ~~~~~p~~~~~~-g~~~p~vv~~HG~~~~~---------------~~~~~~~~~l~~~G~~v~~~d~~~s---~~----- 89 (258)
T 2fx5_A 34 CRIYRPRDLGQG-GVRHPVILWGNGTGAGP---------------STYAGLLSHWASHGFVVAAAETSNA---GT----- 89 (258)
T ss_dssp EEEEEESSTTGG-GCCEEEEEEECCTTCCG---------------GGGHHHHHHHHHHTCEEEEECCSCC---TT-----
T ss_pred EEEEeCCCCccc-CCCceEEEEECCCCCCc---------------hhHHHHHHHHHhCCeEEEEecCCCC---cc-----
Confidence 778888752211 12589999999974210 1122456778899999999766521 11
Q ss_pred hhHHHHHHHHHHHHHHHHHc---------CCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCc
Q 002194 734 RFVEQLVACAEAAVEEVVRR---------GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQ 804 (954)
Q Consensus 734 ~~~~~~~~D~~~av~~l~~~---------~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~ 804 (954)
..|+..+++++.+. ..+|.++++++||||||.+++.++ .+++++++|+++|..... .
T Consensus 90 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~----~-- 155 (258)
T 2fx5_A 90 ------GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL----G-- 155 (258)
T ss_dssp ------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST----T--
T ss_pred ------HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc----c--
Confidence 12334455555442 246778999999999999999887 446899999998753210 0
Q ss_pred cccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHH-HHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccH
Q 002194 805 NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHGALCRLVILPFESHGYAARESI 883 (954)
Q Consensus 805 ~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 883 (954)
.....+.++++|+|++||++|..+| ... +.++++. .+.+++++++++++|.+.. +..
T Consensus 156 ----------------~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~ 213 (258)
T 2fx5_A 156 ----------------HDSASQRRQQGPMFLMSGGGDTIAF--PYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSG 213 (258)
T ss_dssp ----------------CCGGGGGCCSSCEEEEEETTCSSSC--HHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTC
T ss_pred ----------------cchhhhccCCCCEEEEEcCCCcccC--chhhHHHHHhc---cCCCeEEEEECCCCCcccc-chH
Confidence 0112456688999999999999998 775 7777766 4567999999999998753 334
Q ss_pred HHHHHHHHHHHHHhccc
Q 002194 884 MHVLWETDRWLQKYCVS 900 (954)
Q Consensus 884 ~~~~~~i~~fl~~~l~~ 900 (954)
..+.+.+.+||++++..
T Consensus 214 ~~~~~~i~~fl~~~l~~ 230 (258)
T 2fx5_A 214 GAYRGPSTAWFRFQLMD 230 (258)
T ss_dssp GGGHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 57788899999988854
No 145
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.67 E-value=8.8e-16 Score=151.17 Aligned_cols=172 Identities=12% Similarity=0.058 Sum_probs=123.0
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (954)
.|+||++||.... ...+ ........|+++||.|+. .+.+|+|.+..... .....+++..++++
T Consensus 4 ~~~vv~~HG~~~~-----------~~~~--~~~~~~~~l~~~g~~v~~---~d~~g~g~s~~~~~-~~~~~~~~~~~~~~ 66 (176)
T 2qjw_A 4 RGHCILAHGFESG-----------PDAL--KVTALAEVAERLGWTHER---PDFTDLDARRDLGQ-LGDVRGRLQRLLEI 66 (176)
T ss_dssp SCEEEEECCTTCC-----------TTSH--HHHHHHHHHHHTTCEEEC---CCCHHHHTCGGGCT-TCCHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCC-----------ccHH--HHHHHHHHHHHCCCEEEE---eCCCCCCCCCCCCC-CCCHHHHHHHHHHH
Confidence 6899999996311 0111 112456678889999999 55566666543211 12233444555666
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCC
Q 002194 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL 829 (954)
Q Consensus 750 l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~ 829 (954)
+.+.. +.++++++|||+||.+++.++.++| ++++|+++|..+.... ....++
T Consensus 67 ~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~------------------------~~~~~~ 118 (176)
T 2qjw_A 67 ARAAT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL------------------------PALDAA 118 (176)
T ss_dssp HHHHH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB------------------------CCCCCC
T ss_pred HHhcC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc------------------------Cccccc
Confidence 66553 3479999999999999999999997 9999999987542110 004567
Q ss_pred CCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 830 KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 830 ~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
++|+|++||++|..+| ...+.++++.+ +++++++ +++|.+ .+....+.+.+.+||++
T Consensus 119 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~-~~~H~~--~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 119 AVPISIVHAWHDELIP--AADVIAWAQAR-----SARLLLV-DDGHRL--GAHVQAASRAFAELLQS 175 (176)
T ss_dssp SSCEEEEEETTCSSSC--HHHHHHHHHHH-----TCEEEEE-SSCTTC--TTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCccC--HHHHHHHHHhC-----CceEEEe-CCCccc--cccHHHHHHHHHHHHHh
Confidence 8999999999999998 89999998887 3588888 889998 35667777888888764
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=3.2e-14 Score=155.64 Aligned_cols=297 Identities=9% Similarity=-0.007 Sum_probs=175.1
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCC
Q 002194 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (954)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (954)
.+.|+++++.++.+.. ....|.++|+++++.......+... . .++|+|||+.|+++..
T Consensus 2 ~~~~~~~~~~~~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~~----~-~~~~s~dg~~l~~~~~--------- 59 (331)
T 3u4y_A 2 NAMFQTTSNFGIVVEQ--------HLRRISFFSTDTLEILNQITLGYDF----V-DTAITSDCSNVVVTSD--------- 59 (331)
T ss_dssp -----CCCCEEEEEEG--------GGTEEEEEETTTCCEEEEEECCCCE----E-EEEECSSSCEEEEEES---------
T ss_pred ceeEcCCCCEEEEEec--------CCCeEEEEeCcccceeeeEEccCCc----c-eEEEcCCCCEEEEEeC---------
Confidence 3567788877666542 2568999999998886665544322 4 7899999998887610
Q ss_pred CCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--eeEcCCCccccc-cccCCCCcEEEE
Q 002194 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPPAVYTS-LDPSPDEKYILI 348 (954)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--~~~l~~~~~~~~-~~~SpDGk~l~~ 348 (954)
....|+++|+ +++ ...+........ ++|||||++|+
T Consensus 60 ---------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~- 99 (331)
T 3u4y_A 60 ---------------------------------------FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV- 99 (331)
T ss_dssp ---------------------------------------TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-
T ss_pred ---------------------------------------CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-
Confidence 2346889999 776 344444444455 89999999999
Q ss_pred EeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002194 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (954)
Q Consensus 349 ~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (954)
...... ....+++||+++++........ .....++|+|||+.+++. ..
T Consensus 100 ~~~~~~---------~~~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~spdg~~l~~~-~~--------- 147 (331)
T 3u4y_A 100 TVTGLN---------HPFNMQSYSFLKNKFISTIPIP-------------YDAVGIAISPNGNGLILI-DR--------- 147 (331)
T ss_dssp ECCCSS---------SSCEEEEEETTTTEEEEEEECC-------------TTEEEEEECTTSSCEEEE-EE---------
T ss_pred EecCCC---------CcccEEEEECCCCCeEEEEECC-------------CCccceEECCCCCEEEEE-ec---------
Confidence 442211 0127999999876654332211 223578999999976554 11
Q ss_pred ccCCCe-EEEEecCCCCCCCce----EEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCc-EEEecCC
Q 002194 429 VTPRDI-IYTQQAEPVQGEGPE----ILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP-RILFDRS 502 (954)
Q Consensus 429 ~~~~~~-l~~~~~~~~~g~~~~----~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~-~~l~~~~ 502 (954)
..+. +++|+++ ..+... ...........++|+|||++|+++...+ ..|+++++.++.... .......
T Consensus 148 --~~~~~i~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~---~~v~v~d~~~~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 148 --SSANTVRRFKID--ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG---NSIGILETQNPENITLLNAVGTN 220 (331)
T ss_dssp --TTTTEEEEEEEC--TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT---TEEEEEECSSTTSCEEEEEEECS
T ss_pred --CCCceEEEEEEC--CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC---CeEEEEECCCCcccceeeeccCC
Confidence 1234 7777752 223321 1122233456789999999988876544 357788887752100 2222211
Q ss_pred CCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEe
Q 002194 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (954)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 582 (954)
..... ++|+|||++++.... ....|++||+++++.+.+.......... ...
T Consensus 221 -~~~~~------~~~spdg~~l~v~~~--------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~ 271 (331)
T 3u4y_A 221 -NLPGT------IVVSRDGSTVYVLTE--------------------STVDVFNFNQLSGTLSFVKSFGHGLLID--PRP 271 (331)
T ss_dssp -SCCCC------EEECTTSSEEEEECS--------------------SEEEEEEEETTTTEEEEEEEEECCCCCC--CGG
T ss_pred -CCCce------EEECCCCCEEEEEEc--------------------CCCEEEEEECCCCceeeecccccccccC--CCC
Confidence 11112 789999998877642 1224899999999876554322110000 000
Q ss_pred ccCCccccccccCCEEEEEEecCCCCceEEEEECCCCcee
Q 002194 583 MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (954)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~ 622 (954)
.......+|||||+++++.... ...+.++++.+....
T Consensus 272 ~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 272 LFGANQMALNKTETKLFISANI---SRELKVFTISGKVVG 308 (331)
T ss_dssp GTTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCEEE
T ss_pred cccccceEECCCCCEEEEecCC---CCcEEEEEecCCccc
Confidence 0000124799999988776543 346889997665433
No 147
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.67 E-value=3.6e-15 Score=164.07 Aligned_cols=231 Identities=10% Similarity=0.067 Sum_probs=142.4
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+...+||||+ +|+... . ...|.++|+++++...............+..++|+|||++|+...
T Consensus 84 ~v~~~~~s~d~-~l~~~s-------~--dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs------- 146 (344)
T 4gqb_B 84 GVADLTWVGER-GILVAS-------D--SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS------- 146 (344)
T ss_dssp CEEEEEEETTT-EEEEEE-------T--TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------
T ss_pred CEEEEEEeCCC-eEEEEE-------C--CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-------
Confidence 57889999996 566543 2 346667777776543222110001112277899999999998761
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~l 346 (954)
....|.++|+ +|+. ..+... ..+..++|+|||+.+
T Consensus 147 ------------------------------------------~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 147 ------------------------------------------KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 1234667788 7754 344444 778899999999866
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~ 425 (954)
+++... ++.|.+||+..++ ...+..... ...+..++|+|++..++...
T Consensus 185 l~s~s~------------D~~v~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~p~~~~~l~sg-------- 233 (344)
T 4gqb_B 185 FLSCSE------------DNRILLWDTRCPKPASQIGCSAP-----------GYLPTSLAWHPQQSEVFVFG-------- 233 (344)
T ss_dssp EEEEET------------TSCEEEEETTSSSCEEECC---------------CCCEEEEEECSSCTTEEEEE--------
T ss_pred eeeecc------------ccccccccccccceeeeeeccee-----------eccceeeeecCCCCcceEEe--------
Confidence 554422 2389999998654 333322110 01235789999877665541
Q ss_pred cccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCC
Q 002194 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSED 505 (954)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~ 505 (954)
+..+.|.+||+ .++.....+..+...+..++|+|||..++++...++ .|.++|+.++ + ...+..+...
T Consensus 234 ----~~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~---~i~vwd~~~~--~-~~~~~~H~~~ 301 (344)
T 4gqb_B 234 ----DENGTVSLVDT--KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC---SLAVLDSSLS--E-LFRSQAHRDF 301 (344)
T ss_dssp ----ETTSEEEEEES--CC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS---CEEEECTTCC--E-EEEECCCSSC
T ss_pred ----ccCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC---eEEEEECCCC--c-EEEEcCCCCC
Confidence 23457899996 345555677777788899999999976444443333 2555577664 2 2233444444
Q ss_pred ccCCCCCCCeeeccCCcEEEEEE
Q 002194 506 VYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 506 ~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
+.. ++|+|||+.++...
T Consensus 302 V~~------v~~sp~~~~llas~ 318 (344)
T 4gqb_B 302 VRD------ATWSPLNHSLLTTV 318 (344)
T ss_dssp EEE------EEECSSSTTEEEEE
T ss_pred EEE------EEEeCCCCeEEEEE
Confidence 554 89999998766554
No 148
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.66 E-value=4.6e-15 Score=164.94 Aligned_cols=203 Identities=10% Similarity=0.062 Sum_probs=135.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..++|||||+.|+..+ ++....|.++|+.+++.......... +..++|||||++|+...
T Consensus 135 ~~~~v~fSpDg~~la~as-------~~~d~~i~iwd~~~~~~~~~~~~~~~-----V~~v~fspdg~~l~s~s------- 195 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIAS-------SKVPAIMRIIDPSDLTEKFEIETRGE-----VKDLHFSTDGKVVAYIT------- 195 (365)
T ss_dssp CEEEEEECTTSSCEEEEE-------SCSSCEEEEEETTTTEEEEEEECSSC-----CCEEEECTTSSEEEEEC-------
T ss_pred CEEEEEEcCCCCEEEEEE-------CCCCCEEEEeECCCCcEEEEeCCCCc-----eEEEEEccCCceEEecc-------
Confidence 355689999999998865 33356788899998877655443332 77899999999998761
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-E-cCC-C-ccccccccCCCCc
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-E-IGP-P-AVYTSLDPSPDEK 344 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~-l~~-~-~~~~~~~~SpDGk 344 (954)
...+.+++. +|... . ... . ..+..++|||||+
T Consensus 196 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 196 -------------------------------------------GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp -------------------------------------------SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred -------------------------------------------ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 123556666 55322 2 222 2 5678899999999
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
.++..+..... ...+++|++.......+..... .+....+..++|||||+.|+..
T Consensus 233 ~l~~~s~d~~~---------~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~V~~~~~Spdg~~lasg-------- 287 (365)
T 4h5i_A 233 VLIAASLKKGK---------GIVLTKISIKSGNTSVLRSKQV--------TNRFKGITSMDVDMKGELAVLA-------- 287 (365)
T ss_dssp EEEEEEESSSC---------CEEEEEEEEETTEEEEEEEEEE--------ESSCSCEEEEEECTTSCEEEEE--------
T ss_pred EEEEEecCCcc---------eeEEeecccccceecceeeeee--------cCCCCCeEeEEECCCCCceEEE--------
Confidence 99988755321 1257788877554322211100 0112345789999999977765
Q ss_pred ccccccCCCeEEEEecCCCCCCCc-eEE-eecccccCceeeccCCceEEEEEeccccceEEEEEcCC
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGEGP-EIL-HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPG 489 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~-~~l-~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~ 489 (954)
+..+.|.+|++ .+++. ..+ ..+...+..++|||||++|+..+.++. .+||.++.+
T Consensus 288 -----s~D~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t--vrvw~ip~~ 344 (365)
T 4h5i_A 288 -----SNDNSIALVKL---KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT--IHIIKLPLN 344 (365)
T ss_dssp -----ETTSCEEEEET---TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE--EEEEECCTT
T ss_pred -----cCCCEEEEEEC---CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe--EEEEEcCCC
Confidence 34567999996 44433 333 456778899999999999998877665 777777543
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=9.9e-15 Score=161.06 Aligned_cols=284 Identities=11% Similarity=0.048 Sum_probs=156.4
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcccc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~ 243 (954)
.|++|.+... .++...+...........++|||||+ |+++... ++...|+++++++++.+.+...... .
T Consensus 17 ~i~v~~~d~~--tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~------~~~~~v~~~~~~~g~~~~~~~~~~~--~ 85 (347)
T 3hfq_A 17 GIYQGTLDTT--AKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE------DDEGGIAAWQIDGQTAHKLNTVVAP--G 85 (347)
T ss_dssp EEEEEEEETT--TTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE------TTEEEEEEEEEETTEEEEEEEEEEE--S
T ss_pred CEEEEEEcCC--CCeEEEeeeeeccCCcceEEEccCCe-EEEEEec------CCCceEEEEEecCCcEEEeeeeecC--C
Confidence 5666666322 24444433222223577789999999 7665531 2357899999888877666541110 0
Q ss_pred ccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe--
Q 002194 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-- 321 (954)
Q Consensus 244 ~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-- 321 (954)
..+..++|+|||+.|+++.. ....+.++++
T Consensus 86 ~~p~~~a~spdg~~l~~~~~------------------------------------------------~~~~v~v~~~~~ 117 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANY------------------------------------------------HKGTAEVMKIAA 117 (347)
T ss_dssp CCCSEEEEETTTTEEEEEET------------------------------------------------TTTEEEEEEECT
T ss_pred CCCEEEEECCCCCEEEEEeC------------------------------------------------CCCEEEEEEeCC
Confidence 11457899999999987711 1122334444
Q ss_pred CCceeEcCC---C----------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc-CceEEEeccCCCc
Q 002194 322 DGTVKEIGP---P----------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLA 387 (954)
Q Consensus 322 ~G~~~~l~~---~----------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~-g~~~~~l~~~~~~ 387 (954)
+|..+.+.. . .....++|||||+ +++.... ...+++|+++ ++....+......
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~ 184 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG------------SDKVYVYNVSDAGQLSEQSVLTME 184 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT------------TTEEEEEEECTTSCEEEEEEEECC
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC------------CCEEEEEEECCCCcEEEeeeEEcC
Confidence 443332211 1 1245689999999 5554422 2379999998 5544433221110
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec---c------ccc
Q 002194 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL---D------LRY 458 (954)
Q Consensus 388 ~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~---~------~~~ 458 (954)
...+++.++|+|||+.+++. . ...+.+.+++++. .+++.+.+... . ...
T Consensus 185 ---------~g~~p~~~~~spdg~~l~v~-~-----------~~~~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 185 ---------AGFGPRHLVFSPDGQYAFLA-G-----------ELSSQIASLKYDT-QTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp ---------TTCCEEEEEECTTSSEEEEE-E-----------TTTTEEEEEEEET-TTTEEEEEEEEESSCTTCCSCCEE
T ss_pred ---------CCCCCceEEECCCCCEEEEE-e-----------CCCCEEEEEEecC-CCCceEEeeeeeecCCCCCCCCcc
Confidence 01244578999999966554 1 1234666666521 23343333211 1 224
Q ss_pred CceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec--CCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCc
Q 002194 459 GGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD--RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGT 536 (954)
Q Consensus 459 ~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~ 536 (954)
..++|||||++|+++...++ ...+|.++.++ ....+.. ........ ++|+|||++|+......
T Consensus 243 ~~i~~spdG~~l~v~~~~~~-~v~v~~~~~~g---~~~~~~~~~~~~~~~~~------~~~spdg~~l~v~~~~~----- 307 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYN-TLAVFAVTADG---HLTLIQQISTEGDFPRD------FDLDPTEAFVVVVNQNT----- 307 (347)
T ss_dssp EEEEECTTSCEEEEEEETTT-EEEEEEECGGG---CEEEEEEEECSSSCCCE------EEECTTSSEEEEEETTT-----
T ss_pred eeEEECCCCCEEEEEeCCCC-EEEEEEECCCC---cEEEeEEEecCCCCcCe------EEECCCCCEEEEEEcCC-----
Confidence 55899999999877655433 24555555332 2222221 11111111 78999999988776210
Q ss_pred EEEEecCCCCCCCCCCeEEEEECCCCCeEEEec
Q 002194 537 YILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (954)
Q Consensus 537 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 569 (954)
+.-.+|.+|.++|+.+.+..
T Consensus 308 -------------~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 308 -------------DNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp -------------TEEEEEEECTTTCCEEEEEE
T ss_pred -------------CcEEEEEEeCCCCeEEeccc
Confidence 12234555788888776643
No 150
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.66 E-value=1e-14 Score=189.73 Aligned_cols=378 Identities=11% Similarity=0.024 Sum_probs=219.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||+.++..... .+.+|++.. + .....+. .....
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~----------------------------------~v~~~d~~~-~--~~~~~~~-~~~~~ 841 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKN----------------------------------KVLLFDIHT-S--GLLAEIH-TGHHS 841 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETT----------------------------------EEEEEETTT-C--CEEEEEE-CSSSS
T ss_pred eEEEEEECCCCCEEEEEcCC----------------------------------cEEEEEecC-C--CceeEEc-CCCCC
Confidence 45678999999999998763 789999854 2 1222222 12334
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+....|||||+.++... ....|.+++.+++............ +..++|+|||+.|+....+..-..
T Consensus 842 ~v~~~~~sp~~~~l~~~~---------~dg~v~vwd~~~~~~~~~~~~h~~~----v~~v~~spdg~~l~s~s~dg~v~v 908 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIAL---------SQYCVELWNIDSRLKVADCRGHLSW----VHGVMFSPDGSSFLTASDDQTIRV 908 (1249)
T ss_dssp CCCEEEECSSTTEEEEEC---------SSSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceEEEEEcCCCCEEEEEe---------CCCeEEEEEcCCCceeeecCCCccc----eEEEEECCCCCEEEEEeCCCeEEE
Confidence 788999999999988854 2456788888887665443333322 778999999999887744322110
Q ss_pred CC------CCCCCCCCc-----------eeecc-----------CCce-eeechhhhhccCcccccccc-ccccceEEEE
Q 002194 270 PK------KPLVPLGPK-----------MQSNE-----------KRDI-IQVRTFQDLLKDEYDEDLFD-YYATTQLVLV 319 (954)
Q Consensus 270 ~~------~~~~~~~~~-----------~~~~~-----------~~~~-~~~r~~~d~l~~~~d~~~~~-~~~~~~l~~~ 319 (954)
.. ......... ..... .... .........+....++..+. -...+.|+++
T Consensus 909 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~ 988 (1249)
T 3sfz_A 909 WETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKII 988 (1249)
T ss_dssp EEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEE
T ss_pred EEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEE
Confidence 00 000000000 00000 0000 00000000000111111111 1133567777
Q ss_pred Ee-CCcee-EcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccc
Q 002194 320 SL-DGTVK-EIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNS 396 (954)
Q Consensus 320 ~~-~G~~~-~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~ 396 (954)
++ ++... .+... ..+..++|||||++|+..+.+ +.+.+|++.+++...+..+.
T Consensus 989 d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-------------g~i~vwd~~~~~~~~~~~~~----------- 1044 (1249)
T 3sfz_A 989 ELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-------------SVIQVWNWQTGDYVFLQAHQ----------- 1044 (1249)
T ss_dssp ETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-------------SBEEEEETTTTEEECCBCCS-----------
T ss_pred EcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCceEEEecCC-----------
Confidence 87 66433 33333 778899999999999988743 38999999987655433221
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEec
Q 002194 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWY 476 (954)
Q Consensus 397 ~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~ 476 (954)
..+..+.|+||++ ++.. +..+.+.+|++ .++.....+..+...+..++|+|||+.|+..+.+
T Consensus 1045 --~~v~~~~~~~~~~-l~~~-------------~~dg~v~vwd~--~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1045 --ETVKDFRLLQDSR-LLSW-------------SFDGTVKVWNV--ITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD 1106 (1249)
T ss_dssp --SCEEEEEECSSSE-EEEE-------------ESSSEEEEEET--TTTCCCEEEECCSSCCCCEEECSSSSSCEEECCS
T ss_pred --CcEEEEEEcCCCc-EEEE-------------ECCCcEEEEEC--CCCceeEEEcccCCcEEEEEECCCCCEEEEEcCC
Confidence 3456789999886 2222 33557999996 4455556677778888999999999999887655
Q ss_pred cccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEE
Q 002194 477 KTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDL 556 (954)
Q Consensus 477 ~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 556 (954)
+. |.+++..++ .+......+...+.. ++|||||++++.... ...|++
T Consensus 1107 ~~----v~iwd~~~~--~~~~~l~~h~~~v~~------~~~s~dg~~lat~~~---------------------dg~i~v 1153 (1249)
T 3sfz_A 1107 KT----AKIWSFDLL--SPLHELKGHNGCVRC------SAFSLDGILLATGDD---------------------NGEIRI 1153 (1249)
T ss_dssp SC----CCEECSSSS--SCSBCCCCCSSCEEE------EEECSSSSEEEEEET---------------------TSCCCE
T ss_pred Cc----EEEEECCCc--ceeeeeccCCCcEEE------EEECCCCCEEEEEeC---------------------CCEEEE
Confidence 43 445555554 222222222222333 789999999988762 123889
Q ss_pred EECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCce
Q 002194 557 FDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (954)
Q Consensus 557 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~ 621 (954)
||+.+++.......... ..........-...+|||||+.++.. + ..+.+|++.+++.
T Consensus 1154 wd~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~fs~dg~~l~s~--~----g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1154 WNVSDGQLLHSCAPISV--EEGTATHGGWVTDVCFSPDSKTLVSA--G----GYLKWWNVATGDS 1210 (1249)
T ss_dssp EESSSSCCCCCCCCCC---------CCSCCCEEEECTTSSCEEEE--S----SSEEEBCSSSCBC
T ss_pred EECCCCceEEEeccccc--cccccccCceEEEEEECCCCCEEEEC--C----CeEEEEECCCCce
Confidence 99988775433211100 00000000111236799999988643 2 5799999888764
No 151
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.66 E-value=1.5e-14 Score=160.27 Aligned_cols=289 Identities=10% Similarity=0.067 Sum_probs=167.4
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+..++|||||++|+..+... .+--...|++++...+................+..++|+||+++|+..
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~---~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s------- 112 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLS---SRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS------- 112 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSS---SSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-------
T ss_pred CCEEEEEECCCCCEEEEEcCCC---CccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-------
Confidence 4688999999999998865311 111145788888776654322111111111226789999999877644
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeE-----cCCC-ccccccccCC
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-----IGPP-AVYTSLDPSP 341 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~-----l~~~-~~~~~~~~Sp 341 (954)
....|.++|+ +++... .... ..+..++|||
T Consensus 113 -------------------------------------------~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 113 -------------------------------------------DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp -------------------------------------------TTSCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred -------------------------------------------CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 1123555566 543221 1122 6678899999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~ 420 (954)
||++|+..+.+ +.|.+||+.+++.. .+..+ ...+..++|+|+++.+++..
T Consensus 150 dg~~l~sgs~d-------------g~v~iwd~~~~~~~~~~~~h-------------~~~v~~v~~s~~~~~~~~s~--- 200 (357)
T 4g56_B 150 DGTQAVSGGKD-------------FSVKVWDLSQKAVLKSYNAH-------------SSEVNCVAACPGKDTIFLSC--- 200 (357)
T ss_dssp SSSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTCSSCEEEE---
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCC-------------CCCEEEEEEccCCCceeeee---
Confidence 99999987743 38999999876543 33322 13456789999998665541
Q ss_pred cCCCccccccCCCeEEEEecCCCCCCCceEEe--ecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002194 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (954)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 498 (954)
+..+.|.+|++ ..+.....+. .....+..++|+|++..++.....++ .|.++|+.++ +....
T Consensus 201 ---------~~dg~v~~wd~--~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~---~i~~wd~~~~--~~~~~ 264 (357)
T 4g56_B 201 ---------GEDGRILLWDT--RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG---NVSLVNIKNP--DSAQT 264 (357)
T ss_dssp ---------ETTSCEEECCT--TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS---CEEEEESSCG--GGCEE
T ss_pred ---------ccCCceEEEEC--CCCceeeeeeeccccccccchhhhhcccceEEEeeccc---ceeEEECCCC--cEeEE
Confidence 23457889986 2333223222 23445677999999766555544433 3556666664 33333
Q ss_pred ecCCCCCccCCCCCCCeeeccCCcE-EEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccc
Q 002194 499 FDRSSEDVYSDPGSPMMRRTSTGTY-VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYE 577 (954)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 577 (954)
.......+.. ++|+|+|+. |+.... ...|++||+++++..+.....+.
T Consensus 265 ~~~~~~~v~~------l~~sp~~~~~lasgs~---------------------D~~i~iwd~~~~~~~~~~~H~~~---- 313 (357)
T 4g56_B 265 SAVHSQNITG------LAYSYHSSPFLASISE---------------------DCTVAVLDADFSEVFRDLSHRDF---- 313 (357)
T ss_dssp ECCCSSCEEE------EEECSSSSCCEEEEET---------------------TSCEEEECTTSCEEEEECCCSSC----
T ss_pred EeccceeEEE------EEEcCCCCCEEEEEeC---------------------CCEEEEEECCCCcEeEECCCCCC----
Confidence 4444444443 789999864 544431 12499999999877665433321
Q ss_pred eeEEeccCCccccccc-cCCEEEEEEecCCCCceEEEEECCC
Q 002194 578 TTVALMSDQTEGDLYL-NQLKILTSKESKTENTQYYIQSWPD 618 (954)
Q Consensus 578 ~~~~~~~~~~~~~~s~-dg~~l~~~~~s~~~p~~l~~~~~~~ 618 (954)
+.. .+||| |++.|+. .+. -..+++|++..
T Consensus 314 -V~~-------vafsP~d~~~l~s-~s~---Dg~v~iW~~~~ 343 (357)
T 4g56_B 314 -VTG-------VAWSPLDHSKFTT-VGW---DHKVLHHHLPS 343 (357)
T ss_dssp -EEE-------EEECSSSTTEEEE-EET---TSCEEEEECC-
T ss_pred -EEE-------EEEeCCCCCEEEE-EcC---CCeEEEEECCC
Confidence 222 46898 6665543 332 24588888754
No 152
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.66 E-value=2.1e-15 Score=168.85 Aligned_cols=186 Identities=16% Similarity=0.115 Sum_probs=128.6
Q ss_pred CCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcc-----------------
Q 002194 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE----------------- 730 (954)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~----------------- 730 (954)
+++|+||++||+.... .. ....+..|+++||+|+++++++ +|.+.
T Consensus 96 ~~~P~Vv~~HG~~~~~-----------~~----~~~~a~~La~~Gy~V~~~d~~g---~g~s~~~~~~~~~~~~~~~~~~ 157 (383)
T 3d59_A 96 EKYPLVVFSHGLGAFR-----------TL----YSAIGIDLASHGFIVAAVEHRD---RSASATYYFKDQSAAEIGDKSW 157 (383)
T ss_dssp SCEEEEEEECCTTCCT-----------TT----THHHHHHHHHTTCEEEEECCCS---SCSSEEEECSSHHHHHHTCCEE
T ss_pred CCCCEEEEcCCCCCCc-----------hH----HHHHHHHHHhCceEEEEeccCC---CCccceeecCCccccccCCcee
Confidence 3699999999963110 11 2356788999999999966654 33221
Q ss_pred -------cch------hhHHHHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEeeChHHHHHHHHH
Q 002194 731 -------AND------RFVEQLVACAEAAVEEVVR--------------------RGVAHPSKIAVGGHSYGAFMTANLL 777 (954)
Q Consensus 731 -------~~~------~~~~~~~~D~~~av~~l~~--------------------~~~~d~~ri~l~G~S~GG~~a~~~a 777 (954)
... .......+|+..++++|.+ ...+|++||+++|||+||.+++.++
T Consensus 158 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 237 (383)
T 3d59_A 158 LYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTL 237 (383)
T ss_dssp EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHH
Confidence 000 1122336799999999976 4557888999999999999999998
Q ss_pred HhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHH
Q 002194 778 AHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (954)
Q Consensus 778 ~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~ 857 (954)
.+.+ +|+++|+++|... +. . .....++++|+|++||++|..+ ... +..++
T Consensus 238 ~~~~-~v~a~v~~~~~~~----p~----~----------------~~~~~~i~~P~Lii~g~~D~~~----~~~-~~~~~ 287 (383)
T 3d59_A 238 SEDQ-RFRCGIALDAWMF----PL----G----------------DEVYSRIPQPLFFINSEYFQYP----ANI-IKMKK 287 (383)
T ss_dssp HHCT-TCCEEEEESCCCT----TC----C----------------GGGGGSCCSCEEEEEETTTCCH----HHH-HHHHT
T ss_pred hhCC-CccEEEEeCCccC----CC----c----------------hhhhccCCCCEEEEecccccch----hhH-HHHHH
Confidence 8874 6999999987421 00 0 0122567899999999999753 332 33466
Q ss_pred HHhCCCcEEEEEeCCCCCcCCC------------------cccH----HHHHHHHHHHHHHhcccC
Q 002194 858 LKGHGALCRLVILPFESHGYAA------------------RESI----MHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 858 l~~~g~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~i~~fl~~~l~~~ 901 (954)
+...+.+++++++++++|.+.. ..+. +.+.+.+++||+++|+..
T Consensus 288 l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 288 CYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp TCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 6666788999999999998621 1112 233356999999999654
No 153
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.66 E-value=5.4e-15 Score=157.21 Aligned_cols=214 Identities=17% Similarity=0.203 Sum_probs=138.6
Q ss_pred EEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC
Q 002194 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (954)
+.+.+|.+++...+-|+ + .|.||++||.+... ..| ...+..|+++||.|++ .+.
T Consensus 3 ~~~~~g~~l~y~~~g~~------~--~~~vvllHG~~~~~-----------~~w----~~~~~~l~~~g~~vi~---~D~ 56 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPR------D--GLPVVFHHGWPLSA-----------DDW----DNQMLFFLSHGYRVIA---HDR 56 (275)
T ss_dssp EECTTSCEEEEEEESCT------T--SCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEEcCCC------C--CceEEEECCCCCch-----------hhH----HHHHHHHHHCCceEEE---EcC
Confidence 45678988887766442 1 36799999964211 111 2345678889999999 667
Q ss_pred CCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCcccEEEEeccCCCCCC--
Q 002194 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (954)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (954)
+|+|.+... ........+|+.+.++.+ +.+++.++||||||.+++.+++++ |++++++|++++......
T Consensus 57 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 130 (275)
T 1a88_A 57 RGHGRSDQPSTGHDMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKS 130 (275)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCB
T ss_pred CcCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccC
Confidence 788887543 223556677888877776 235899999999999999988776 899999999886421100
Q ss_pred --CCCCCccc----------------------------c-------ch----hhhc-----H-------HHHHhcCcccc
Q 002194 799 --TPFGFQNE----------------------------D-------RT----LWEA-----T-------STYVEMSPFMS 825 (954)
Q Consensus 799 --~~~~~~~~----------------------------~-------~~----~~~~-----~-------~~~~~~sp~~~ 825 (954)
.+...... . .. .|.. . ..+...+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T 1a88_A 131 DTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDD 210 (275)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccc
Confidence 00000000 0 00 0000 0 00111122234
Q ss_pred cCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 826 ~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+.++++|+|+++|++|..+| +....+.+..+. .++++++++++||... .+..+.+.+.|.+||.
T Consensus 211 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 211 LKRIDVPVLVAHGTDDQVVP--YADAAPKSAELL---ANATLKSYEGLPHGML-STHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCccCC--cHHHHHHHHhhC---CCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhh
Confidence 56789999999999999998 665544443332 2479999999999874 5667788888999985
No 154
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.65 E-value=2.8e-14 Score=160.39 Aligned_cols=239 Identities=15% Similarity=0.123 Sum_probs=145.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..+.|||||+.|+... ....|.++|+++++........... +..++|+|||+.|+...
T Consensus 125 ~v~~v~~s~dg~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~p~~~~l~s~s------- 184 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGA---------EDRLIRIWDIENRKIVMILQGHEQD----IYSLDYFPSGDKLVSGS------- 184 (393)
T ss_dssp BEEEEEECTTSSEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEE-------
T ss_pred eEEEEEECCCCCEEEEEc---------CCCeEEEEECCCCcEEEEEccCCCC----EEEEEEcCCCCEEEEec-------
Confidence 367899999999998855 2457788898888765554433332 67899999999988661
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeE-cCCCccccccccCC-CCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPPAVYTSLDPSP-DEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~-l~~~~~~~~~~~Sp-DGk~l 346 (954)
....|.++|+ +++... +.....+..++|+| ||++|
T Consensus 185 ------------------------------------------~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 185 ------------------------------------------GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp ------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred ------------------------------------------CCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 1234667788 665433 33335677889999 99999
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~ 425 (954)
+..+.+ +.+.+||+.++.. ..+...... ..++...+..++|+|||+.++..
T Consensus 223 ~~~s~d-------------~~v~iwd~~~~~~~~~~~~~~~~------~~~h~~~v~~v~~~~~g~~l~s~--------- 274 (393)
T 1erj_A 223 AAGSLD-------------RAVRVWDSETGFLVERLDSENES------GTGHKDSVYSVVFTRDGQSVVSG--------- 274 (393)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSEEEEE---------
T ss_pred EEEcCC-------------CcEEEEECCCCcEEEeecccccC------CCCCCCCEEEEEECCCCCEEEEE---------
Confidence 888743 3899999986543 333211000 01222446789999999876554
Q ss_pred cccccCCCeEEEEecCCCC----------CCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCc
Q 002194 426 KVEVTPRDIIYTQQAEPVQ----------GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP 495 (954)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~----------g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 495 (954)
+..+.|.+|++.... +.....+..+...+..++|+|++++|+..+.++ .|.++|..++ ++
T Consensus 275 ----s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~----~v~iwd~~~~--~~ 344 (393)
T 1erj_A 275 ----SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR----GVLFWDKKSG--NP 344 (393)
T ss_dssp ----ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS----EEEEEETTTC--CE
T ss_pred ----eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC----eEEEEECCCC--eE
Confidence 335578888861110 000122334555677899999999988776543 3666677664 33
Q ss_pred EEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 496 RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 496 ~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
......+...+......+...|+|++.+++...
T Consensus 345 ~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 345 LLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred EEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 444444444333300000012345777777665
No 155
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.6e-16 Score=176.60 Aligned_cols=269 Identities=10% Similarity=-0.040 Sum_probs=163.0
Q ss_pred CCCCceecCCCCEEEEEecCCCC----CccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecC
Q 002194 110 PLPALSFSPQRDKILFLKRRALP----PLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~ 185 (954)
.+.+++|||||+.||..+.+... ....+..+...+..+.++|++. ..+|++.. + +...+..+
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~----------~~~~~~~~-~---~~~~~~~~ 82 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEF----------ENKLDFEL-A---QQNGLLNS 82 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCC----------CCTTTTSC-C---CSSCSSTT
T ss_pred cEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCC----------cceEEEEe-C---CCceEeec
Confidence 68899999999999998876221 1112223334445566666651 11222221 1 11112112
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCC
Q 002194 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (954)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (954)
.....+...+|||||++||-.. . ...+.+++.++ ....+. ....--...+..++|||||+.|+.+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s-------~--dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs--- 148 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLS-------N--NGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN--- 148 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEE-------T--TSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE---
T ss_pred CCCCcEEEEEECCCCCEEEEEe-------C--CCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEc---
Confidence 2234789999999999999876 3 33455556443 222232 22100011266899999999999871
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--------eeEc----CCC-
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--------VKEI----GPP- 331 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--------~~~l----~~~- 331 (954)
..+.|.++++ ++. ...+ ...
T Consensus 149 ----------------------------------------------~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 149 ----------------------------------------------EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK 182 (588)
T ss_dssp ----------------------------------------------TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC
T ss_pred ----------------------------------------------CCCEEEEEECCCCccccccceeeeeeeccccccc
Confidence 1234556676 553 2333 222
Q ss_pred ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEE----EeccCCCcccCCccccccccCccceeec
Q 002194 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR----ELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (954)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~----~l~~~~~~~~~p~~~~~~~~g~~~~~ws 407 (954)
..+.+++||||| |+..+.+ +.+++|+++++... .+.. +.+..+.+++|+
T Consensus 183 ~~V~sVawSPdg--Laass~D-------------~tVrlWd~~~~~~~~~~~tL~~------------~h~~~V~svaFs 235 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALSN-------------NSVFSMTVSASSHQPVSRMIQN------------ASRRKITDLKIV 235 (588)
T ss_dssp CCEEEEEEETTE--EEEEETT-------------CCEEEECCCSSSSCCCEEEEEC------------CCSSCCCCEEEE
T ss_pred ccEEEEEEcCCc--EEEEeCC-------------CeEEEEECCCCccccceeeecc------------cccCcEEEEEEE
Confidence 578899999999 5555533 38999999976532 2321 112346788999
Q ss_pred cCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe-ecccccCceee--ccCCceEEEEEeccccceEEE
Q 002194 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISW--CDDSLALVYESWYKTRRTRTW 484 (954)
Q Consensus 408 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~--spDg~~l~~~~~~~~~~~~l~ 484 (954)
|+.|+.. . .+.|.+|+. .+++...+. ++...+..++| |||++.|+.+.+. + . +||
T Consensus 236 --g~~LASa-------------~-~~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed-G-~-klw 293 (588)
T 2j04_A 236 --DYKVVLT-------------C-PGYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKT-S-Y-KVL 293 (588)
T ss_dssp --TTEEEEE-------------C-SSEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSC-E-E-EEE
T ss_pred --CCEEEEE-------------e-CCeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC-C-C-EEE
Confidence 5555444 2 358999996 555553443 56667888999 9999887776433 2 2 688
Q ss_pred EEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEE
Q 002194 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAK 527 (954)
Q Consensus 485 ~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 527 (954)
..+ . ++++|||..+++.
T Consensus 294 ~~d--~------------------------~~~spd~~l~a~~ 310 (588)
T 2j04_A 294 LED--E------------------------LHVTADNIIAPYL 310 (588)
T ss_dssp ESS--S------------------------EEEECCCSSHHHH
T ss_pred eec--c------------------------EEECCCceEEEEc
Confidence 765 1 5688999877764
No 156
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.65 E-value=2.4e-14 Score=177.50 Aligned_cols=262 Identities=11% Similarity=0.082 Sum_probs=175.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++||+...+ +.|.+|++.+ + .....+.. +..
T Consensus 15 ~v~~i~~sp~~~~la~~~~~---------------------------------g~v~iwd~~~-~--~~~~~~~~--~~~ 56 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYS---------------------------------GRVEIWNYET-Q--VEVRSIQV--TET 56 (814)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CSS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CEEEEEECCC-C--ceEEEEec--CCC
Confidence 56789999999999998865 5799999854 2 23344443 334
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..+.|||||++|++... ...|.+++..+++........... +..++|+|||+.|+...
T Consensus 57 ~v~~~~~s~~~~~l~~~~~---------dg~i~vw~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~------- 116 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSD---------DFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGS------- 116 (814)
T ss_dssp CEEEEEEEGGGTEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEeCCCCEEEEEeC---------CCeEEEEECCCCcEEEEEecCCCC----EEEEEEeCCCCEEEEEc-------
Confidence 7899999999999998652 567888898887765443322222 77899999999988661
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC-ce-eEcCCC-ccccccccCC-CCc
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TV-KEIGPP-AVYTSLDPSP-DEK 344 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G-~~-~~l~~~-~~~~~~~~Sp-DGk 344 (954)
....|.++++ ++ .. ..+... ..+..++|+| ||+
T Consensus 117 ------------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 117 ------------------------------------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp ------------------------------------------TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred ------------------------------------------CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 1234667777 44 32 333333 6788899999 888
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeecc--CCCCceEEEEecc
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS--DKPSTLYWAETQD 421 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp--Dg~~i~~~~~~~~ 421 (954)
.|+..+.+ +.+.+||+.++.. ..+... ....+..+.|+| ||+.++..
T Consensus 155 ~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~l~~~----- 204 (814)
T 3mkq_A 155 TFASGCLD-------------RTVKVWSLGQSTPNFTLTTG------------QERGVNYVDYYPLPDKPYMITA----- 204 (814)
T ss_dssp EEEEEETT-------------SEEEEEETTCSSCSEEEECC------------CTTCCCEEEECCSTTCCEEEEE-----
T ss_pred EEEEEeCC-------------CeEEEEECCCCcceeEEecC------------CCCCEEEEEEEECCCCCEEEEE-----
Confidence 88887743 3899999975432 222221 113456789999 88866655
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 501 (954)
+..+.|.+|+. .++.....+..+...+..++|+|||+.|+..+.++ .|.++++.++ ........
T Consensus 205 --------~~dg~i~~~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~v~vwd~~~~--~~~~~~~~ 268 (814)
T 3mkq_A 205 --------SDDLTIKIWDY--QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG----TLKIWNSSTY--KVEKTLNV 268 (814)
T ss_dssp --------CTTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTC--SEEEEECC
T ss_pred --------eCCCEEEEEEC--CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--cEEEEeec
Confidence 34568999996 23333444555667788899999999888776443 2555666664 33333333
Q ss_pred CCCCccCCCCCCCeeeccCCcE
Q 002194 502 SSEDVYSDPGSPMMRRTSTGTY 523 (954)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~ 523 (954)
....+.. ++|+|+|+.
T Consensus 269 ~~~~v~~------~~~~~~~~~ 284 (814)
T 3mkq_A 269 GLERSWC------IATHPTGRK 284 (814)
T ss_dssp SSSSEEE------EEECTTCGG
T ss_pred CCCcEEE------EEEccCCCc
Confidence 3333333 788999974
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.65 E-value=2.6e-14 Score=158.61 Aligned_cols=284 Identities=14% Similarity=0.123 Sum_probs=161.1
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
..|++|.+.... ++.+.++.. .......++|||||++|+++...+ +.++...+|.++.++|+.+++.......
T Consensus 27 ~~i~~~~~d~~~--g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~---~~~~~v~~~~~~~~~g~~~~~~~~~~~~- 99 (361)
T 3scy_A 27 KGIYTFRFNEET--GESLPLSDA-EVANPSYLIPSADGKFVYSVNEFS---KDQAAVSAFAFDKEKGTLHLLNTQKTMG- 99 (361)
T ss_dssp CEEEEEEEETTT--CCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCS---STTCEEEEEEEETTTTEEEEEEEEECSS-
T ss_pred CCEEEEEEeCCC--CCEEEeecc-cCCCCceEEECCCCCEEEEEEccC---CCCCcEEEEEEeCCCCcEEEeeEeccCC-
Confidence 367888774322 555555433 334667789999999998876411 1234566788887777776665432111
Q ss_pred cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-
Q 002194 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (954)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~- 321 (954)
.....+++ ||+.|+++.. ....+.++++
T Consensus 100 -~~p~~~~~--dg~~l~~~~~------------------------------------------------~~~~v~~~~~~ 128 (361)
T 3scy_A 100 -ADPCYLTT--NGKNIVTANY------------------------------------------------SGGSITVFPIG 128 (361)
T ss_dssp -SCEEEEEE--CSSEEEEEET------------------------------------------------TTTEEEEEEBC
T ss_pred -CCcEEEEE--CCCEEEEEEC------------------------------------------------CCCEEEEEEeC
Confidence 00223444 9998887611 1223555555
Q ss_pred -CCceeEcCC-----C----------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce-------E
Q 002194 322 -DGTVKEIGP-----P----------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-------V 378 (954)
Q Consensus 322 -~G~~~~l~~-----~----------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-------~ 378 (954)
+|....+.. + .....++|||||++|++..... ..+++|+++... .
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~v~v~~~~~~~~~~~~~~l 196 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT------------DQIHKFNINPNANADNKEKF 196 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTCCTTTCCCC
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC------------CEEEEEEEcCCCCcccccce
Confidence 333222210 0 1224589999999998876322 378888877322 2
Q ss_pred EEe-----ccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEee
Q 002194 379 REL-----CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK 453 (954)
Q Consensus 379 ~~l-----~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~ 453 (954)
... ...+ ...+++.++|+|||+.+++. . ...+.|.+|++ .+++.+.+..
T Consensus 197 ~~~~~~~~~~~~-----------~~~~~~~~~~spdg~~l~v~-~-----------~~~~~v~v~~~---~~g~~~~~~~ 250 (361)
T 3scy_A 197 LTKGTPEAFKVA-----------PGSGPRHLIFNSDGKFAYLI-N-----------EIGGTVIAFRY---ADGMLDEIQT 250 (361)
T ss_dssp EEEEEEEEEECC-----------TTCCEEEEEECTTSSEEEEE-E-----------TTTCEEEEEEE---ETTEEEEEEE
T ss_pred eecccccceecC-----------CCCCCeEEEEcCCCCEEEEE-c-----------CCCCeEEEEEe---cCCceEEeEE
Confidence 111 1110 11345679999999966554 1 12457888886 3444433322
Q ss_pred cc------cccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCC-CCCccCCCCCCCeeeccCCcEEEE
Q 002194 454 LD------LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIA 526 (954)
Q Consensus 454 ~~------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~spdG~~l~~ 526 (954)
.. .....++|||||++|+++.........+|.++..++ ....+.... ...... ++|+|||++|+.
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~g~~~~~------~~~spdg~~l~~ 322 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLTGIHPRN------FIITPNGKYLLV 322 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEECSSCCCE------EEECTTSCEEEE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecCCCCCce------EEECCCCCEEEE
Confidence 11 123478999999998776544123467777776654 222222111 111111 789999999887
Q ss_pred EEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEe
Q 002194 527 KIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (954)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 568 (954)
.... .+.-.+|.+|.++|+.+.+.
T Consensus 323 ~~~~------------------~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 323 ACRD------------------TNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EETT------------------TTEEEEEEECTTTCCEEECS
T ss_pred EECC------------------CCCEEEEEEECCCCcEeecc
Confidence 7621 12234666788888876653
No 158
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.65 E-value=3.7e-15 Score=154.60 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=100.2
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCc
Q 002194 743 AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSP 822 (954)
Q Consensus 743 ~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 822 (954)
+...++...+. .+|++||+++|+|+||.+++.++.++|+.|+++|+++|..... ..+. .
T Consensus 117 i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~-----------------~~~~---~ 175 (246)
T 4f21_A 117 VNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAW-----------------DNFK---G 175 (246)
T ss_dssp HHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTH-----------------HHHS---T
T ss_pred HHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcc-----------------cccc---c
Confidence 33333433333 5899999999999999999999999999999999999853210 0000 0
Q ss_pred ccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 823 FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 823 ~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
.......++|+|++||+.|.+|| ++.++++++.|+..|.++++..||++||.+. .+.++.+.+||++.|+
T Consensus 176 ~~~~~~~~~Pvl~~HG~~D~vVp--~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 176 KITSINKGLPILVCHGTDDQVLP--EVLGHDLSDKLKVSGFANEYKHYVGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp TCCGGGTTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEESSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred cccccccCCchhhcccCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 00011235899999999999999 9999999999999999999999999999985 3456789999999874
No 159
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.65 E-value=5.2e-15 Score=157.51 Aligned_cols=214 Identities=16% Similarity=0.230 Sum_probs=138.7
Q ss_pred EEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC
Q 002194 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (954)
+...+|.+++...+-|+ + .|.||++||.+... ..| ...+..|+++||.|++ .|.
T Consensus 4 ~~~~~g~~l~y~~~g~~------~--~~~vvllHG~~~~~-----------~~w----~~~~~~L~~~g~~vi~---~D~ 57 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPR------D--APVIHFHHGWPLSA-----------DDW----DAQLLFFLAHGYRVVA---HDR 57 (276)
T ss_dssp EECTTSCEEEEEEESCT------T--SCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EECCCCcEEEEEecCCC------C--CCeEEEECCCCcch-----------hHH----HHHHHHHHhCCCEEEE---ecC
Confidence 45678988887766442 1 36799999964211 111 2345678889999999 677
Q ss_pred CCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCcccEEEEeccCCCCCC--
Q 002194 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (954)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (954)
+|+|.+... ........+|+.+.++.+ +.+++.++||||||.+++.+++++ |++++++|++++......
T Consensus 58 ~G~G~S~~~~~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 131 (276)
T 1zoi_A 58 RGHGRSSQVWDGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQT 131 (276)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccc
Confidence 788888543 223556678888887776 235899999999999999988876 899999999886421100
Q ss_pred --CCCCCc----------------------------c-c------cch----hhhc-----H-------HHHHhcCcccc
Q 002194 799 --TPFGFQ----------------------------N-E------DRT----LWEA-----T-------STYVEMSPFMS 825 (954)
Q Consensus 799 --~~~~~~----------------------------~-~------~~~----~~~~-----~-------~~~~~~sp~~~ 825 (954)
.+.... . . ... .|.. . ..+...+....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (276)
T 1zoi_A 132 PGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTED 211 (276)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHH
T ss_pred ccccccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhh
Confidence 000000 0 0 000 0000 0 00011122234
Q ss_pred cCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 826 ~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+.++++|+|+++|++|..+| +....+.+..+. .+.+++++|++||... .++...+.+.|.+||+
T Consensus 212 l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 212 LKGIQQPVLVMHGDDDQIVP--YENSGVLSAKLL---PNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEEcCCCcccC--hHHHHHHHHhhC---CCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 56789999999999999998 764444443332 2479999999999874 4567788888888874
No 160
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.65 E-value=2.2e-14 Score=162.19 Aligned_cols=279 Identities=15% Similarity=0.148 Sum_probs=177.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||+.|+..+.+ +.|.+|++.+ + ...+.+.++ ..
T Consensus 110 ~V~~~~~~p~~~~l~s~s~D---------------------------------g~i~vwd~~~-~--~~~~~l~~h--~~ 151 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASED---------------------------------ATIKVWDYET-G--DFERTLKGH--TD 151 (410)
T ss_dssp CEEEEEECSSSSEEEEEESS---------------------------------SCEEEEETTT-C--CCCEEECCC--SS
T ss_pred cEEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--cEEEEEecc--CC
Confidence 46678999999999988876 5799999854 2 223344433 24
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+....|+|||+.|+... . ...|.++|+.+++........... +..+.|+|||+.|+...
T Consensus 152 ~V~~v~~~~~~~~l~sgs-------~--D~~i~iwd~~~~~~~~~~~~h~~~----V~~v~~~p~~~~l~s~s------- 211 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCS-------A--DMTIKLWDFQGFECIRTMHGHDHN----VSSVSIMPNGDHIVSAS------- 211 (410)
T ss_dssp CEEEEEECTTSSEEEEEE-------T--TSCCCEEETTSSCEEECCCCCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEcCCCCEEEEEe-------C--CCeEEEEeCCCCceeEEEcCCCCC----EEEEEEeCCCCEEEEEe-------
Confidence 688999999999888755 2 345666688777665443333322 77899999999888661
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l 346 (954)
....|.++|+ +|. ...+... ..+..+.|+|||+.|
T Consensus 212 ------------------------------------------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 212 ------------------------------------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp ------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 1234777788 664 3344444 667788999999999
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEE-------
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE------- 418 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~------- 418 (954)
+..+.+ +.+.+||+.+++.. .+..+. ..+..++|+|++........
T Consensus 250 ~s~s~D-------------~~v~vwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 250 ASCSND-------------QTVRVWVVATKECKAELREHR-------------HVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred EEEcCC-------------CeEEEEECCCCceeeEecCCC-------------ceEEEEEEcCcccccchhhhccccccc
Confidence 888744 38999999865443 332221 23456788887532100000
Q ss_pred eccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002194 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (954)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 498 (954)
....+..-+..+..+.|.+|++ .++.....+..+...+..++|+|+|++|+..+.++ .|.++|..++ +....
T Consensus 304 ~~~~g~~l~sgs~D~~i~iwd~--~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~----~i~vwd~~~~--~~~~~ 375 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDKTIKMWDV--STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK----TLRVWDYKNK--RCMKT 375 (410)
T ss_dssp ----CCEEEEEETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTT----EEEEECCTTS--CCCEE
T ss_pred cCCCCCEEEEEeCCCeEEEEEC--CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--ceEEE
Confidence 0000000011134567999996 33333455566677788899999999998776543 3555566554 22333
Q ss_pred ecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
...+...+.. +.|+|+|.+|+...
T Consensus 376 ~~~h~~~v~~------l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 376 LNAHEHFVTS------LDFHKTAPYVVTGS 399 (410)
T ss_dssp EECCSSCEEE------EEECSSSSCEEEEE
T ss_pred EcCCCCcEEE------EEEcCCCCEEEEEe
Confidence 3334444444 88999999988766
No 161
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.65 E-value=1.7e-14 Score=157.90 Aligned_cols=267 Identities=11% Similarity=-0.023 Sum_probs=178.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCcccccc--------------ccceeeeeeecCCCCCCcceeeEeceEEEEccCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELAR--------------PEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK 175 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~ 175 (954)
.+..++|||||+.|+... ++...++++.. ....+..+.+++++......+..+.|.+|++.. +.
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~ 130 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA-PT 130 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC-C-
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCC-CC
Confidence 577899999999999887 44444443332 223345566777655444344446799999854 21
Q ss_pred CCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCC
Q 002194 176 LGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNS 255 (954)
Q Consensus 176 ~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG 255 (954)
......+.. ....+..+.|+|||+.|+.... ...|+++|+.+++........... +..+.|+|||
T Consensus 131 ~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~---------dg~v~~~d~~~~~~~~~~~~~~~~----i~~~~~~~~~ 195 (337)
T 1gxr_A 131 PRIKAELTS--SAPACYALAISPDSKVCFSCCS---------DGNIAVWDLHNQTLVRQFQGHTDG----ASCIDISNDG 195 (337)
T ss_dssp -EEEEEEEC--SSSCEEEEEECTTSSEEEEEET---------TSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTS
T ss_pred cceeeeccc--CCCceEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCceeeeeecccCc----eEEEEECCCC
Confidence 001222322 2236788999999999888652 457888898887765544333322 6789999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeE-cCCCcc
Q 002194 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPPAV 333 (954)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~-l~~~~~ 333 (954)
+.|+... ....|.++|+ +++... +.....
T Consensus 196 ~~l~~~~-------------------------------------------------~dg~i~~~d~~~~~~~~~~~~~~~ 226 (337)
T 1gxr_A 196 TKLWTGG-------------------------------------------------LDNTVRSWDLREGRQLQQHDFTSQ 226 (337)
T ss_dssp SEEEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECSSC
T ss_pred CEEEEEe-------------------------------------------------cCCcEEEEECCCCceEeeecCCCc
Confidence 9888761 1235778888 665433 333366
Q ss_pred ccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002194 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (954)
Q Consensus 334 ~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i 413 (954)
+..++|+|||+.|++.+.+ +.+.+|++.+++...+..+. ..+..++|+|||+.+
T Consensus 227 v~~~~~s~~~~~l~~~~~~-------------~~i~~~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l 280 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGMES-------------SNVEVLHVNKPDKYQLHLHE-------------SCVLSLKFAYCGKWF 280 (337)
T ss_dssp EEEEEECTTSSEEEEEETT-------------SCEEEEETTSSCEEEECCCS-------------SCEEEEEECTTSSEE
T ss_pred eEEEEECCCCCEEEEEcCC-------------CcEEEEECCCCCeEEEcCCc-------------cceeEEEECCCCCEE
Confidence 7889999999999988743 37999999977655444322 345689999999976
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEE
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (954)
+.. +..+.|.+|++ ..++..........+..++|+|||+.|+....++. .++|.+
T Consensus 281 ~~~-------------~~dg~i~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--i~iw~~ 335 (337)
T 1gxr_A 281 VST-------------GKDNLLNAWRT---PYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKK--ATVYEV 335 (337)
T ss_dssp EEE-------------ETTSEEEEEET---TTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSC--EEEEEE
T ss_pred EEe-------------cCCCcEEEEEC---CCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCe--EEEEEE
Confidence 655 33568999996 55555444556667788999999999888765432 566654
No 162
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.65 E-value=4.1e-14 Score=161.23 Aligned_cols=258 Identities=10% Similarity=0.078 Sum_probs=164.7
Q ss_pred ceEEEEccCCCCCCceeeeec---C-CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCC
Q 002194 164 GIGIHQLFPDGKLGQEIEIQG---F-PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD 239 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~---~-~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~ 239 (954)
.|++|++.+ ++..+... + .....+..++|+|||+.++... ....|+++|+++++.........
T Consensus 145 ~i~~~d~~~----g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~---------~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 145 GMDVLDINS----GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM---------QANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SEEEEETTT----CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG---------GGTEEEEEETTTCCEEEEEECSS
T ss_pred eEEEEECCC----CeEeeecCcccccccCCceeEEEEcCCCEEEEEEC---------CCCEEEEEECCCceEEEEEcCCC
Confidence 689999854 33333211 1 1122577789999997655532 25689999998877654433222
Q ss_pred ccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEE
Q 002194 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (954)
Q Consensus 240 ~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~ 319 (954)
.. +..++|+|||+.++++.. ....|+++
T Consensus 212 ~~----~~~~~~~~~~~~l~~~~~------------------------------------------------~~~~i~~~ 239 (433)
T 3bws_A 212 KW----SKILLYDPIRDLVYCSNW------------------------------------------------ISEDISVI 239 (433)
T ss_dssp SS----EEEEEEETTTTEEEEEET------------------------------------------------TTTEEEEE
T ss_pred CC----eeEEEEcCCCCEEEEEec------------------------------------------------CCCcEEEE
Confidence 22 568899999998887610 12358889
Q ss_pred Ee-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCcccccc
Q 002194 320 SL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSV 397 (954)
Q Consensus 320 ~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~ 397 (954)
|+ +++....... ..+..++|+|||++|++.......-. ..++.|++||+.+++.......+
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-----~~dg~i~~~d~~~~~~~~~~~~~------------ 302 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQE-----SGGGRLGIYSMDKEKLIDTIGPP------------ 302 (433)
T ss_dssp ETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTC-----SCCEEEEEEETTTTEEEEEEEEE------------
T ss_pred ECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccc-----cCCCeEEEEECCCCcEEeeccCC------------
Confidence 98 7765444433 66788999999999998874331000 01348999999876554333211
Q ss_pred ccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEecc
Q 002194 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (954)
Q Consensus 398 ~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 477 (954)
..+..++|+|||+.+++.. ...+.|++|++ .+++..........+..++|+|||+.|+......
T Consensus 303 -~~~~~~~~~~~g~~l~~~~------------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 303 -GNKRHIVSGNTENKIYVSD------------MCCSKIEVYDL---KEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp -ECEEEEEECSSTTEEEEEE------------TTTTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEEEEEECCC
T ss_pred -CCcceEEECCCCCEEEEEe------------cCCCEEEEEEC---CCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCC
Confidence 2345789999998766541 23458999996 4444444444555677899999999988876543
Q ss_pred cc-----------ceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 478 TR-----------RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 478 ~~-----------~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
+. ...|+++|+.++ +........ ..+.. ++|+|||++|+...
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTD--TVKEFWEAG-NQPTG------LDVSPDNRYLVISD 419 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTT--EEEEEEECS-SSEEE------EEECTTSCEEEEEE
T ss_pred CccccccccccccceEEEEEECCCC--cEEEEecCC-CCCce------EEEcCCCCEEEEEE
Confidence 21 137999998875 333333221 12222 78999999988765
No 163
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.65 E-value=1e-14 Score=166.72 Aligned_cols=223 Identities=12% Similarity=0.048 Sum_probs=148.7
Q ss_pred ceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 638 ~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
+...+.+.+.+|..++.... + ..|+||++||++.... .| ...+..|+++||.|+.
T Consensus 2 p~i~~~~~~~dG~~l~y~~~---G-------~gp~VV~lHG~~~~~~-----------~~----~~l~~~La~~Gy~Vi~ 56 (456)
T 3vdx_A 2 PFITVGQENSTSIDLYYEDH---G-------TGVPVVLIHGFPLSGH-----------SW----ERQSAALLDAGYRVIT 56 (456)
T ss_dssp CEEEEEEETTEEEEEEEEEE---S-------SSEEEEEECCTTCCGG-----------GG----TTHHHHHHHHTEEEEE
T ss_pred CeEeecccccCCeEEEEEEe---C-------CCCEEEEECCCCCcHH-----------HH----HHHHHHHHHCCcEEEE
Confidence 34556667788888875443 1 2588999999742211 12 1356678899999999
Q ss_pred cCCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCcccEEEEeccCC
Q 002194 718 GPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAY 794 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~ 794 (954)
.+.+|+|.+... ........+|+.++++++ +.++++++|||+||.+++.+++.+ |++++++|++++..
T Consensus 57 ---~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~ 127 (456)
T 3vdx_A 57 ---YDRRGFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLE 127 (456)
T ss_dssp ---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCC
T ss_pred ---ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcc
Confidence 566678877543 234566788888888876 346899999999999999988887 89999999999865
Q ss_pred CCCCCCCCCcccc--chh--------------h------------------hcHHHHH---------------------h
Q 002194 795 NRTLTPFGFQNED--RTL--------------W------------------EATSTYV---------------------E 819 (954)
Q Consensus 795 ~~~~~~~~~~~~~--~~~--------------~------------------~~~~~~~---------------------~ 819 (954)
............. ... + .....+. .
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (456)
T 3vdx_A 128 PFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWY 207 (456)
T ss_dssp SCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTT
T ss_pred cccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhh
Confidence 4221110000000 000 0 0000000 1
Q ss_pred cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 820 ~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
.+....+.++++|+|+++|++|..+| +....+.+.... .+++++++++++|.+. .+....+.+.+.+||++++.
T Consensus 208 ~d~~~~l~~i~~PvLiI~G~~D~~vp--~~~~~~~l~~~~---~~~~~~~i~gagH~~~-~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 208 TDFRADIPRIDVPALILHGTGDRTLP--IENTARVFHKAL---PSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp CCCTTTSTTCCSCCEEEEETTCSSSC--GGGTHHHHHHHC---TTSEEEEETTCCSCTT-TTTHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhCCCCEEEEEeCCCCCcC--HHHHHHHHHHHC---CCceEEEeCCCCCcch-hhCHHHHHHHHHHHHHHhhc
Confidence 12234467789999999999999998 774433333321 2368999999999875 46778899999999998875
Q ss_pred c
Q 002194 900 S 900 (954)
Q Consensus 900 ~ 900 (954)
.
T Consensus 282 ~ 282 (456)
T 3vdx_A 282 A 282 (456)
T ss_dssp H
T ss_pred c
Confidence 3
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.65 E-value=9.6e-14 Score=151.90 Aligned_cols=290 Identities=11% Similarity=-0.019 Sum_probs=168.9
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCC-cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGA-KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~-~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 241 (954)
..|++|++.+ ++........... ....++|||||++|+++.. ....|+++|+.+++.......+...
T Consensus 11 ~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 11 DKLVVIDTEK----MAVDKVITIADAGPTPMVPMVAPGGRIAYATVN--------KSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp TEEEEEETTT----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEET--------TTTEEEEEETTTCCEEEEEECCBTT
T ss_pred CeEEEEECCC----CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC--------CCCeEEEEECCCCCeEeeEEcCCcc
Confidence 4789999853 3332221122211 3678999999999887642 2468999999988765433322200
Q ss_pred -ccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEE
Q 002194 242 -LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (954)
Q Consensus 242 -~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~ 320 (954)
....+..++|+|||+.|+++....... ..... .....|++++
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~-------------------------------~~~~~------~~~~~i~v~d 121 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLE-------------------------------LTHFE------VQPTRVALYD 121 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEEC-------------------------------SSCEE------ECCCEEEEEE
T ss_pred cccccccceEECCCCCEEEEEecccccc-------------------------------ccccc------ccCceEEEEE
Confidence 000155899999999988772100000 00000 0125688999
Q ss_pred e-CCcee-EcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccc
Q 002194 321 L-DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVR 398 (954)
Q Consensus 321 ~-~G~~~-~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~ 398 (954)
+ +++.. .+..+.....++|||||++|++.+ +.+++||+++++.........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~~~~~------------ 174 (337)
T 1pby_B 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQS------------ 174 (337)
T ss_dssp TTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECSTT------------
T ss_pred CCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeeeeccc------------
Confidence 8 66543 333345567889999999998872 179999998776543322110
Q ss_pred cCccceeeccCCCCceEEE------------EeccCCCccccccCCCeEEEEecCCCCCCCceEEe--ecccccCceeec
Q 002194 399 KGMRSINWRSDKPSTLYWA------------ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWC 464 (954)
Q Consensus 399 ~g~~~~~wspDg~~i~~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~s 464 (954)
....+.|+|||+.+++.. ....++.... ......|+++++ .+++...+. ........++|+
T Consensus 175 -~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~s 249 (337)
T 1pby_B 175 -WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP-TAYRTGLLTMDL---ETGEMAMREVRIMDVFYFSTAVN 249 (337)
T ss_dssp -TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG-GGEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEEC
T ss_pred -cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc-cccccceEEEeC---CCCCceEeecCCCCCceeeEEEC
Confidence 012347999999765431 0000000000 011126788886 555554332 223344568999
Q ss_pred cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCC
Q 002194 465 DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNG 544 (954)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~ 544 (954)
|||++|++. + ..|+++|+.++ +........ ..... ++|+|||++|+....
T Consensus 250 ~dg~~l~~~---~---~~v~~~d~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~--------------- 299 (337)
T 1pby_B 250 PAKTRAFGA---Y---NVLESFDLEKN--ASIKRVPLP-HSYYS------VNVSTDGSTVWLGGA--------------- 299 (337)
T ss_dssp TTSSEEEEE---E---SEEEEEETTTT--EEEEEEECS-SCCCE------EEECTTSCEEEEESB---------------
T ss_pred CCCCEEEEe---C---CeEEEEECCCC--cCcceecCC-Cceee------EEECCCCCEEEEEcC---------------
Confidence 999998877 1 46888998875 222222211 11122 789999998876531
Q ss_pred CCCCCCCCeEEEEECCCCCeEEEec
Q 002194 545 ATPEGNIPFLDLFDINTGSKERIWE 569 (954)
Q Consensus 545 ~~~~~~~~~l~~~d~~~g~~~~l~~ 569 (954)
...|++||+++++......
T Consensus 300 ------~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 300 ------LGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ------SSEEEEEETTTCCEEEEEE
T ss_pred ------CCcEEEEECcCCcEEEEEE
Confidence 2359999999887655443
No 165
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.64 E-value=5.4e-14 Score=182.80 Aligned_cols=278 Identities=12% Similarity=0.062 Sum_probs=177.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++||..+.+ +.|.+|++.+ + .....+.+ +..
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d---------------------------------~~i~vw~~~~-~--~~~~~~~~--h~~ 658 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGAD---------------------------------KTLQVFKAET-G--EKLLDIKA--HED 658 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred cEEEEEECCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--CEEEEecc--CCC
Confidence 45678999999999988775 5799999854 2 22334433 334
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCe--EEEEEecCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNST--LLVCTIPLLRG 267 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~--~l~~~~~~~~~ 267 (954)
.+..++|||||+.|+.... ...|.++|+.+++........... +..+.|+|+++ .++..
T Consensus 659 ~v~~~~~s~~~~~l~s~~~---------d~~v~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~sg------ 719 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSA---------DKKVKIWDSATGKLVHTYDEHSEQ----VNCCHFTNKSNHLLLATG------ 719 (1249)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSCCEEEEE------
T ss_pred CEEEEEEecCCCEEEEEeC---------CCeEEEEECCCCceEEEEcCCCCc----EEEEEEecCCCceEEEEE------
Confidence 7889999999999988652 457888899888765544333322 67899999654 44433
Q ss_pred CCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccccccCCCCc
Q 002194 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEK 344 (954)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk 344 (954)
+ ....|.++|+ +++ ...+... ..+..++|+|||+
T Consensus 720 ---------------~----------------------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 720 ---------------S----------------------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp ---------------E----------------------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT
T ss_pred ---------------e----------------------------CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC
Confidence 0 1234777788 664 3344444 7788999999999
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~ 423 (954)
+|+..+.+ +.+.+||+..+.. ..+...................+..++|+|||+.++..
T Consensus 757 ~l~s~s~d-------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~------- 816 (1249)
T 3sfz_A 757 LLASCSAD-------------GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA------- 816 (1249)
T ss_dssp EEEEEESS-------------SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE-------
T ss_pred EEEEEECC-------------CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE-------
Confidence 99988744 3899999986543 33322111100000000112245678999999977765
Q ss_pred CccccccCCCeEEEEecCCCCCCCceEEe-ecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCC
Q 002194 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (954)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 502 (954)
..+.+++|++ .++.....+. .+...+..++|+|+|+.++....+.. +.+++..++ ........+
T Consensus 817 -------~~~~v~~~d~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~----v~vwd~~~~--~~~~~~~~h 881 (1249)
T 3sfz_A 817 -------AKNKVLLFDI--HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYC----VELWNIDSR--LKVADCRGH 881 (1249)
T ss_dssp -------ETTEEEEEET--TTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSC----EEEEETTTT--EEEEEECCC
T ss_pred -------cCCcEEEEEe--cCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCe----EEEEEcCCC--ceeeecCCC
Confidence 1357888986 3333333332 45667888999999999888755432 455555553 223333334
Q ss_pred CCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 503 SEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
...+.. +.|+|||++++...
T Consensus 882 ~~~v~~------v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 882 LSWVHG------VMFSPDGSSFLTAS 901 (1249)
T ss_dssp SSCEEE------EEECTTSSEEEEEE
T ss_pred ccceEE------EEECCCCCEEEEEe
Confidence 333433 78899998887765
No 166
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.64 E-value=9.7e-15 Score=159.19 Aligned_cols=234 Identities=11% Similarity=0.092 Sum_probs=161.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|+|++..++..+.+ ..|.+|++.. + ...+.+.. ...
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D---------------------------------~~i~lWd~~~-~--~~~~~~~~--~~~ 123 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLD---------------------------------AHIRLWDLEN-G--KQIKSIDA--GPV 123 (321)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CTT
T ss_pred CEEEEEECCCCCEEEEEeCC---------------------------------CcEEEEECCC-C--CEEEEEeC--CCc
Confidence 35578899999999888775 5899999854 2 12233332 223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+...+|||||+.|+... ....|.++++++++........... +..++|+|||+.|+...
T Consensus 124 ~~~~~~~spdg~~l~~g~---------~dg~v~i~~~~~~~~~~~~~~~~~~----v~~~~~spdg~~lasg~------- 183 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGT---------HVGKVNIFGVESGKKEYSLDTRGKF----ILSIAYSPDGKYLASGA------- 183 (321)
T ss_dssp CCCCEEECTTSSEEEEEC---------TTSEEEEEETTTCSEEEEEECSSSC----EEEEEECTTSSEEEEEE-------
T ss_pred cEEEEEECCCCCEEEEEc---------CCCcEEEEEcCCCceeEEecCCCce----EEEEEECCCCCEEEEEc-------
Confidence 577899999999998854 3567888888877654433333222 66899999999998761
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~l 346 (954)
....|.++|+ +++. ..+... ..+..++|||||++|
T Consensus 184 ------------------------------------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l 221 (321)
T 3ow8_A 184 ------------------------------------------IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 221 (321)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEE
Confidence 1234777888 7754 344444 678899999999999
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~ 425 (954)
+..+.+ +.|.+||+..+.. ..+..+. ..+..++|+|||+.++..
T Consensus 222 ~s~s~d-------------g~i~iwd~~~~~~~~~~~~h~-------------~~v~~~~~sp~~~~l~s~--------- 266 (321)
T 3ow8_A 222 VTASDD-------------GYIKIYDVQHANLAGTLSGHA-------------SWVLNVAFCPDDTHFVSS--------- 266 (321)
T ss_dssp EEECTT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSEEEEE---------
T ss_pred EEEcCC-------------CeEEEEECCCcceeEEEcCCC-------------CceEEEEECCCCCEEEEE---------
Confidence 887743 3899999985543 3333321 345679999999976654
Q ss_pred cccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEE
Q 002194 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (954)
+..+.|.+|++ .++.....+..+...+..++|+|||+.|+..+.++. .+||..
T Consensus 267 ----s~D~~v~iwd~--~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~--i~vwd~ 319 (321)
T 3ow8_A 267 ----SSDKSVKVWDV--GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE--IHIYDC 319 (321)
T ss_dssp ----ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCC--EEEEEC
T ss_pred ----eCCCcEEEEeC--CCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCe--EEEEeC
Confidence 34557899996 233333445566677888999999999987765543 666653
No 167
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.64 E-value=4.7e-15 Score=158.25 Aligned_cols=235 Identities=13% Similarity=0.098 Sum_probs=147.9
Q ss_pred ceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEE
Q 002194 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (954)
Q Consensus 638 ~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (954)
+.+.+++.+. .|.++..+ +|+++ + |+||++||++.. .....|.... .....++++||+|+
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~------~-~~v~llHG~~~~---------~~~~~w~~~~-~~~~~l~~~~~~vv 65 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG------P-HAVYLLDGLRAQ---------DDYNGWDINT-PAFEEYYQSGLSVI 65 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS------S-SEEEECCCTTCC---------SSSCHHHHHS-CHHHHHTTSSSEEE
T ss_pred eEEEEEEECcccCceeEEE--EcCCC------C-CEEEEECCCCCC---------CCcccccccC-cHHHHHhcCCeEEE
Confidence 4566777655 56677655 45443 1 489999996310 0001111000 12345667899999
Q ss_pred EcCCCCCCCCCCccc---------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEE
Q 002194 717 GGPTTPIIGEGDEEA---------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (954)
Q Consensus 717 ~~~~~~~~G~G~~~~---------~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (954)
.++..+..++..... ...+.....+|+... +.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 66 ~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 142 (280)
T 1dqz_A 66 MPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAW---LQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYA 142 (280)
T ss_dssp EECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHH---HHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEE
T ss_pred EECCCCCccccCCCCCCccccccccccHHHHHHHHHHHH---HHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEE
Confidence 977654333321100 112222223444444 44433467789999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCC-Cc-----c----ccchhhhc--HHHHHhcCcccccCCC---CCCEEEEEeCCCC----------
Q 002194 788 IARSGAYNRTLTPFG-FQ-----N----EDRTLWEA--TSTYVEMSPFMSANKL---KKPILLVHGEEDN---------- 842 (954)
Q Consensus 788 v~~~~~~~~~~~~~~-~~-----~----~~~~~~~~--~~~~~~~sp~~~~~~~---~~P~Lii~G~~D~---------- 842 (954)
|+++|.++....... +. . .....|.. ...+...+|...+.++ .+|+++.||+.|.
T Consensus 143 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~ 222 (280)
T 1dqz_A 143 ASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPA 222 (280)
T ss_dssp EEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHH
T ss_pred EEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccch
Confidence 999998764321000 00 0 00011111 1345666777666554 5799999999997
Q ss_pred ----CCCCchHHHHHHHHHHHhCC-CcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 843 ----NSGTLTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 843 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
.++ ..++++++++|+..| +++++.++++++|.+. .....+...+.||.+.|+
T Consensus 223 ~~~e~~~--~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 223 KFLEGLT--LRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHHhC
Confidence 455 789999999999999 9999999988899863 234455677788877663
No 168
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.64 E-value=9.1e-16 Score=172.97 Aligned_cols=234 Identities=13% Similarity=0.110 Sum_probs=153.9
Q ss_pred EEcCCCeEEEEEEEcCCCC-CCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH----HCCc---EE
Q 002194 644 YQRKDGVQLSATLYLPPGY-DPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL----ARGF---AI 715 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~-~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la----~~G~---~V 715 (954)
+...||.++.+..+.|.+- .+...++.|+||++||.+.... .|. ..+..|+ ..|| .|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-----------~~~----~~~~~L~~~~~~~G~~~~~v 89 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-----------VWE----YYLPRLVAADAEGNYAIDKV 89 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-----------GGG----GGGGGSCCCBTTTTEEEEEE
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-----------HHH----HHHHHHHHhhhhcCcceeEE
Confidence 4567999999999988641 0111234689999999743221 111 2233455 3489 99
Q ss_pred EEcCCCCCCCCCCcccc-------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEE
Q 002194 716 LGGPTTPIIGEGDEEAN-------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGI 788 (954)
Q Consensus 716 ~~~~~~~~~G~G~~~~~-------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v 788 (954)
++ .+..|+|.+... ........+|+.++++.+.....+++.++.++||||||.+++.++.++|++++++|
T Consensus 90 i~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 166 (398)
T 2y6u_A 90 LL---IDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLI 166 (398)
T ss_dssp EE---ECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEE
T ss_pred EE---EcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEE
Confidence 99 666788877542 12345667777777776532212444569999999999999999999999999999
Q ss_pred EeccCCCCCC--------CCCC---Ccc-----------c---c----------chhhh--c---HHHHHh---------
Q 002194 789 ARSGAYNRTL--------TPFG---FQN-----------E---D----------RTLWE--A---TSTYVE--------- 819 (954)
Q Consensus 789 ~~~~~~~~~~--------~~~~---~~~-----------~---~----------~~~~~--~---~~~~~~--------- 819 (954)
+++|...... .... ... . . ...+. . .+.+..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T 2y6u_A 167 LIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGD 246 (398)
T ss_dssp EESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC----
T ss_pred EeccccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCcccccc
Confidence 9998755311 0000 000 0 0 00000 0 001100
Q ss_pred ---------------------------cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC
Q 002194 820 ---------------------------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (954)
Q Consensus 820 ---------------------------~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 872 (954)
.+....+.++++|+|++||++|..+| +..++++++.+. .++++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~--~~~~~~l~~~~~----~~~~~~~~~ 320 (398)
T 2y6u_A 247 DEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCP--PQNQLFLQKTLQ----NYHLDVIPG 320 (398)
T ss_dssp ----CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEETT
T ss_pred ccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCC--HHHHHHHHHhCC----CceEEEeCC
Confidence 01123456789999999999999998 888887777653 479999999
Q ss_pred CCCcCCCcccHHHHHHHHHHHHHHhcccCC
Q 002194 873 ESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 873 ~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
+||... .+....+.+.|.+||.+++...+
T Consensus 321 ~gH~~~-~e~p~~~~~~i~~fl~~~~~~~~ 349 (398)
T 2y6u_A 321 GSHLVN-VEAPDLVIERINHHIHEFVLTSP 349 (398)
T ss_dssp CCTTHH-HHSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccch-hcCHHHHHHHHHHHHHHHHHhHH
Confidence 999864 45677889999999999886543
No 169
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.64 E-value=4.4e-14 Score=156.63 Aligned_cols=317 Identities=9% Similarity=0.032 Sum_probs=191.2
Q ss_pred eeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEE
Q 002194 179 EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (954)
Q Consensus 179 ~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (954)
...+.++ ...+..++|||||+.|+.... ...|.++++.+++........... +..++|+|||+.|
T Consensus 25 ~~~l~~h--~~~v~~~~~s~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l 89 (369)
T 3zwl_B 25 AIKLTGH--ERPLTQVKYNKEGDLLFSCSK---------DSSASVWYSLNGERLGTLDGHTGT----IWSIDVDCFTKYC 89 (369)
T ss_dssp EEEEECC--SSCEEEEEECTTSCEEEEEES---------SSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEE
T ss_pred cEEEEEe--eceEEEEEEcCCCCEEEEEeC---------CCEEEEEeCCCchhhhhhhhcCCc----EEEEEEcCCCCEE
Confidence 3445443 346899999999999888652 457888888887765544333322 6789999999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCCccccc
Q 002194 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPAVYTS 336 (954)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~~~~~~ 336 (954)
+... ....|.++++ +++.. .+.....+..
T Consensus 90 ~s~~-------------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~v~~ 120 (369)
T 3zwl_B 90 VTGS-------------------------------------------------ADYSIKLWDVSNGQCVATWKSPVPVKR 120 (369)
T ss_dssp EEEE-------------------------------------------------TTTEEEEEETTTCCEEEEEECSSCEEE
T ss_pred EEEe-------------------------------------------------CCCeEEEEECCCCcEEEEeecCCCeEE
Confidence 8761 1235778888 66543 3333377888
Q ss_pred cccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccc--cCccceeeccCCCCc
Q 002194 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVR--KGMRSINWRSDKPST 413 (954)
Q Consensus 337 ~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~--~g~~~~~wspDg~~i 413 (954)
+.|+|||+.|+....... ...+.+.+|++..... ..+....... ........ ..+..++|+|||+.+
T Consensus 121 ~~~~~~~~~l~~~~~~~~--------~~~g~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDNVM--------KNPGSINIYEIERDSATHELTKVSEEP--IHKIITHEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp EEECTTSSEEEEEECCBT--------TBCCEEEEEEEEECTTTCCEEEECSSC--SEEEECCTTCCCEEEEEECGGGCEE
T ss_pred EEEccCCCEEEEecCCcc--------CCCCEEEEEEecCCccceeecccccce--eeeccCCcCccceeEEEEcCCCCEE
Confidence 999999999998874310 1124889999874321 1111100000 00000111 145678999999977
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCC-CCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCC
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKD 492 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~ 492 (954)
+.. +..+.|.+|++ .. +.....+..+...+..++|+|||+.|+....++ .|+++|+.++
T Consensus 191 ~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~- 250 (369)
T 3zwl_B 191 IAG-------------HKDGKISKYDV--SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDT----NSFLVDVSTL- 250 (369)
T ss_dssp EEE-------------ETTSEEEEEET--TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC-
T ss_pred EEE-------------cCCCEEEEEEC--CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCc----eEEEEECCCC-
Confidence 665 33568999996 22 222344455667788899999999998875443 4777777765
Q ss_pred CCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCc
Q 002194 493 VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDK 572 (954)
Q Consensus 493 ~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 572 (954)
+....... ...+.. +.|+|+|++++...... ...++.... ......+++||+.+++.........
T Consensus 251 -~~~~~~~~-~~~~~~------~~~~~~~~~l~~~~~~~---~~~~~~~~~----~~~~~~i~~~d~~~~~~~~~~~~~~ 315 (369)
T 3zwl_B 251 -QVLKKYET-DCPLNT------AVITPLKEFIILGGGQE---AKDVTTTSA----NEGKFEARFYHKIFEEEIGRVQGHF 315 (369)
T ss_dssp -CEEEEEEC-SSCEEE------EEECSSSSEEEEEECCC--------------------CEEEEEETTTCCEEEEEECCS
T ss_pred -ceeeeecC-CCCcee------EEecCCCceEEEeecCC---CceEEEEec----CCCcceeEEEecCCCcchhheeccc
Confidence 23333321 122222 78999999999887321 112221111 1123469999999887765554332
Q ss_pred ccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002194 573 EKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (954)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g 619 (954)
. .+. ..+|+||++.++.... ...+.+|++.++
T Consensus 316 ~----~v~-------~~~~s~~~~~l~s~~~----dg~v~iw~~~~~ 347 (369)
T 3zwl_B 316 G----PLN-------TVAISPQGTSYASGGE----DGFIRLHHFEKS 347 (369)
T ss_dssp S----CEE-------EEEECTTSSEEEEEET----TSEEEEEEECHH
T ss_pred C----cEE-------EEEECCCCCEEEEEcC----CCeEEEEECccc
Confidence 1 122 2468999987765433 356888887654
No 170
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.64 E-value=8.4e-15 Score=155.50 Aligned_cols=212 Identities=16% Similarity=0.184 Sum_probs=135.9
Q ss_pred EEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC
Q 002194 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (954)
+++.+|.+++...+- + .|.||++||.+... ..| ...+..|+++||.|++ .+.
T Consensus 3 ~~~~~g~~l~y~~~g--------~--~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~ 54 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG--------S--GQPIVFSHGWPLNA-----------DSW----ESQMIFLAAQGYRVIA---HDR 54 (273)
T ss_dssp EECTTSCEEEEEEES--------C--SSEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EecCCCcEEEEEEcC--------C--CCEEEEECCCCCcH-----------HHH----hhHHhhHhhCCcEEEE---ECC
Confidence 566788888755441 1 36799999964211 111 2345678889999999 666
Q ss_pred CCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCcccEEEEeccCCCCCC--
Q 002194 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (954)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (954)
+|+|.+... ........+|+.++++.+ +.+++.++||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (273)
T 1a8s_A 55 RGHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128 (273)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccC
Confidence 788887543 223456677777777664 346899999999999999877765 899999999886321100
Q ss_pred --CCCCCccc----------------------------c-------ch----hhhc------------HHHHHhcCcccc
Q 002194 799 --TPFGFQNE----------------------------D-------RT----LWEA------------TSTYVEMSPFMS 825 (954)
Q Consensus 799 --~~~~~~~~----------------------------~-------~~----~~~~------------~~~~~~~sp~~~ 825 (954)
........ . .. .|.. ...+...+....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (273)
T 1a8s_A 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTED 208 (273)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhh
Confidence 00000000 0 00 0000 000111122334
Q ss_pred cCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 826 ~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+.++++|+|+++|++|..+| +....+.+..+. .++++++++++||... .+..+.+.+.|.+||.
T Consensus 209 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 209 LKKIDVPTLVVHGDADQVVP--IEASGIASAALV---KGSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHTCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEECCCCccCC--hHHHHHHHHHhC---CCcEEEEeCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 56889999999999999998 765544444332 2368999999999874 5567788888999985
No 171
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.64 E-value=4.5e-14 Score=159.28 Aligned_cols=267 Identities=12% Similarity=0.137 Sum_probs=168.2
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
+.|++|++.+ +....+....+...+..++|+|||+.|+.... ...|.++++++++...........
T Consensus 113 ~~v~lw~~~~----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~- 178 (401)
T 4aez_A 113 RNVYVWNADS----GSVSALAETDESTYVASVKWSHDGSFLSVGLG---------NGLVDIYDVESQTKLRTMAGHQAR- 178 (401)
T ss_dssp TEEEEEETTT----CCEEEEEECCTTCCEEEEEECTTSSEEEEEET---------TSCEEEEETTTCCEEEEECCCSSC-
T ss_pred CeEEEeeCCC----CcEeEeeecCCCCCEEEEEECCCCCEEEEECC---------CCeEEEEECcCCeEEEEecCCCCc-
Confidence 4799999954 44433332323347889999999999988652 457788888877655444333322
Q ss_pred cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-
Q 002194 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (954)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~- 321 (954)
+..+.| +++.|+... ....|.++++
T Consensus 179 ---v~~~~~--~~~~l~~~~-------------------------------------------------~dg~i~i~d~~ 204 (401)
T 4aez_A 179 ---VGCLSW--NRHVLSSGS-------------------------------------------------RSGAIHHHDVR 204 (401)
T ss_dssp ---EEEEEE--ETTEEEEEE-------------------------------------------------TTSEEEEEETT
T ss_pred ---eEEEEE--CCCEEEEEc-------------------------------------------------CCCCEEEEecc
Confidence 667888 556666551 1234667777
Q ss_pred CC--ceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCcccccc
Q 002194 322 DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSV 397 (954)
Q Consensus 322 ~G--~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~ 397 (954)
.+ ....+... ..+..++|+|||++|+..+.+ +.+.+||+..+.. ..+..+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~------------- 258 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND-------------NVVQIWDARSSIPKFTKTNH------------- 258 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTCSSEEEEECCC-------------
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC-------------CeEEEccCCCCCccEEecCC-------------
Confidence 22 23344444 778899999999999988743 3899999986543 333322
Q ss_pred ccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEecc
Q 002194 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (954)
Q Consensus 398 ~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 477 (954)
...+..++|+|+|+.+++.... +..+.|.+|++ ..++..........+..++|+|+|+.|+.+....
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~g----------s~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGG----------TMDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECC----------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT
T ss_pred cceEEEEEECCCCCCEEEEecC----------CCCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC
Confidence 1345789999999987775110 13568999996 4455444445566788899999999999876433
Q ss_pred ccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEE
Q 002194 478 TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (954)
Q Consensus 478 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 557 (954)
.+...||.+. ++..........+...+.. +.|+|||++|+.... ...|++|
T Consensus 326 dg~i~v~~~~--~~~~~~~~~~~~h~~~v~~------~~~s~dg~~l~s~~~---------------------dg~i~iw 376 (401)
T 4aez_A 326 DNNLSIWSYS--SSGLTKQVDIPAHDTRVLY------SALSPDGRILSTAAS---------------------DENLKFW 376 (401)
T ss_dssp TCEEEEEEEE--TTEEEEEEEEECCSSCCCE------EEECTTSSEEEEECT---------------------TSEEEEE
T ss_pred CCcEEEEecC--CccceeEEEecCCCCCEEE------EEECCCCCEEEEEeC---------------------CCcEEEE
Confidence 3234555544 4211111112233333333 789999999887652 2359999
Q ss_pred ECCCCCeE
Q 002194 558 DINTGSKE 565 (954)
Q Consensus 558 d~~~g~~~ 565 (954)
|+.+++..
T Consensus 377 ~~~~~~~~ 384 (401)
T 4aez_A 377 RVYDGDHV 384 (401)
T ss_dssp ECCC----
T ss_pred ECCCCccc
Confidence 99877643
No 172
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.64 E-value=5.3e-15 Score=154.67 Aligned_cols=200 Identities=12% Similarity=0.079 Sum_probs=130.4
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAV 747 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av 747 (954)
.|.||++||..... ..| ......|+++||.|++ .+.+|+|.+.... .......+|+.+++
T Consensus 16 ~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~~GhG~s~~~~~~~~~~~~~~d~~~~~ 77 (247)
T 1tqh_A 16 ERAVLLLHGFTGNS-----------ADV----RMLGRFLESKGYTCHA---PIYKGHGVPPEELVHTGPDDWWQDVMNGY 77 (247)
T ss_dssp SCEEEEECCTTCCT-----------HHH----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCh-----------HHH----HHHHHHHHHCCCEEEe---cccCCCCCCHHHhcCCCHHHHHHHHHHHH
Confidence 36788999953110 011 1345567789999999 6777888663321 12445567788888
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC-C--CC---ccc-------cchhh-hc
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-F--GF---QNE-------DRTLW-EA 813 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~--~~---~~~-------~~~~~-~~ 813 (954)
+++.+.+ .+++.|+||||||.+++.++.++| ++++|++++........ . .+ ... ..... ..
T Consensus 78 ~~l~~~~---~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (247)
T 1tqh_A 78 EFLKNKG---YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 152 (247)
T ss_dssp HHHHHHT---CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHcC---CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhh
Confidence 8887654 258999999999999999999997 88888765432210000 0 00 000 00000 00
Q ss_pred HH-----------HHHh--cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc
Q 002194 814 TS-----------TYVE--MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR 880 (954)
Q Consensus 814 ~~-----------~~~~--~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 880 (954)
.. .+.. .+....+.++++|+|++||++|..+| ++.++++++.+.. ..++++++|++||.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 153 MEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIES--PVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCCC--SSEEEEEETTCCSSGGGS
T ss_pred hhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCC--cchHHHHHHhcCC--CceEEEEeCCCceeeccC
Confidence 00 0000 01223567789999999999999998 8888888776643 347999999999997544
Q ss_pred ccHHHHHHHHHHHHHH
Q 002194 881 ESIMHVLWETDRWLQK 896 (954)
Q Consensus 881 ~~~~~~~~~i~~fl~~ 896 (954)
+..+.+.+.+.+||++
T Consensus 229 ~~~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 229 QEKDQLHEDIYAFLES 244 (247)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh
Confidence 4467888999999976
No 173
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.64 E-value=8.4e-14 Score=153.36 Aligned_cols=270 Identities=10% Similarity=0.066 Sum_probs=164.1
Q ss_pred CCCCcee-----cC-CCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCC---Cc-e
Q 002194 110 PLPALSF-----SP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL---GQ-E 179 (954)
Q Consensus 110 ~~~~~~~-----SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~---~~-~ 179 (954)
.+..++| +| ||+.|+..+.+ ..|.+|++...... +. .
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D---------------------------------~~v~iWd~~~~~~~~~~~~~~ 69 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRD---------------------------------KTVMIWKLYEEEQNGYFGIPH 69 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETT---------------------------------SCEEEEEECSSCCSSBSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCC---------------------------------CEEEEEECCcCCccccccccc
Confidence 3456667 66 99999988876 57899998532111 11 1
Q ss_pred eeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEE
Q 002194 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (954)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (954)
..+.+ +...+...+|+|||+.|+... ....|.++|+.+++........... +..++|+|||+.|+
T Consensus 70 ~~l~~--h~~~V~~~~~~~~~~~l~s~s---------~D~~v~lwd~~~~~~~~~~~~h~~~----v~~v~~sp~~~~l~ 134 (343)
T 2xzm_R 70 KALTG--HNHFVSDLALSQENCFAISSS---------WDKTLRLWDLRTGTTYKRFVGHQSE----VYSVAFSPDNRQIL 134 (343)
T ss_dssp EEECC--CSSCEEEEEECSSTTEEEEEE---------TTSEEEEEETTSSCEEEEEECCCSC----EEEEEECSSTTEEE
T ss_pred chhcc--CCCceEEEEECCCCCEEEEEc---------CCCcEEEEECCCCcEEEEEcCCCCc----EEEEEECCCCCEEE
Confidence 22333 224688899999999888754 2557788898887664433322222 67899999999988
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCC-ceeEcC---CC-ccc
Q 002194 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIG---PP-AVY 334 (954)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l~---~~-~~~ 334 (954)
... ....|.++++.+ ....+. .. ..+
T Consensus 135 s~~-------------------------------------------------~d~~i~~wd~~~~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 135 SAG-------------------------------------------------AEREIKLWNILGECKFSSAEKENHSDWV 165 (343)
T ss_dssp EEE-------------------------------------------------TTSCEEEEESSSCEEEECCTTTSCSSCE
T ss_pred EEc-------------------------------------------------CCCEEEEEeccCCceeeeecccCCCcee
Confidence 661 112355666633 222222 12 456
Q ss_pred cccccCCCC----------cEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccce
Q 002194 335 TSLDPSPDE----------KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSI 404 (954)
Q Consensus 335 ~~~~~SpDG----------k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~ 404 (954)
..+.|+|++ .+|+..+. ++.+.+||..+.....+..+. ..+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~-------------d~~i~iwd~~~~~~~~~~~h~-------------~~v~~~ 219 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGW-------------DGRLKVWNTNFQIRYTFKAHE-------------SNVNHL 219 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEET-------------TSEEEEEETTTEEEEEEECCS-------------SCEEEE
T ss_pred eeeeeccccccccccCCCCCEEEEEcC-------------CCEEEEEcCCCceeEEEcCcc-------------ccceEE
Confidence 778888887 56666653 348999996654444433322 345679
Q ss_pred eeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEE
Q 002194 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTW 484 (954)
Q Consensus 405 ~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~ 484 (954)
+|+|||+.|+.. +..+.|.+|++ ...............+..++|+||++.|+... +++ .+||
T Consensus 220 ~~s~~g~~l~sg-------------s~dg~v~iwd~--~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~--v~iw 281 (343)
T 2xzm_R 220 SISPNGKYIATG-------------GKDKKLLIWDI--LNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQG--VKIF 281 (343)
T ss_dssp EECTTSSEEEEE-------------ETTCEEEEEES--SCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSC--EEEE
T ss_pred EECCCCCEEEEE-------------cCCCeEEEEEC--CCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCC--EEEE
Confidence 999999976655 44568899995 23333333333344578899999998776543 322 5555
Q ss_pred EEcCCCCCCCcEEEec-C----------CCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 485 VISPGSKDVAPRILFD-R----------SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 485 ~~d~~~~~~~~~~l~~-~----------~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
.+ .++......... . ....+. .++|+|||++|+...
T Consensus 282 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 282 NL--MTQSKAPVCTIEAEPITKAEGQKGKNPQCT------SLAWNALGKKLFAGF 328 (343)
T ss_dssp ES--SSCCSCSEEECCCCSGGGBTTBCCSCCCEE------EEEECSSSCCEEEEE
T ss_pred Ee--CCCCCCceEEeecCcchhhhhhcCCCCceE------EEEECCCCCeEEEec
Confidence 44 433112211111 0 111111 278999999998776
No 174
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.63 E-value=1.6e-13 Score=150.63 Aligned_cols=264 Identities=12% Similarity=0.091 Sum_probs=149.2
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
..|++|++..++ ..+.+........+..++|||||++|++... .++...+|.++.++++.+.+.......
T Consensus 15 ~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 15 QQIHVWNLNHEG---ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR------PEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp TEEEEEEECTTS---CEEEEEEEECSSCCCCEEECTTSSEEEEEET------TTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred CeEEEEEECCCC---cEEEeeeEecCCCCceEEECCCCCEEEEeec------CCCeEEEEEecCCCCceeeccccccCC-
Confidence 478999985322 2233322223346788999999999888653 223444444544477765543322111
Q ss_pred cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-
Q 002194 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (954)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~- 321 (954)
.+..++|+|||+.|+++.. ....|+++++
T Consensus 85 --~~~~~~~s~dg~~l~~~~~------------------------------------------------~~~~i~~~d~~ 114 (343)
T 1ri6_A 85 --SLTHISTDHQGQFVFVGSY------------------------------------------------NAGNVSVTRLE 114 (343)
T ss_dssp --CCSEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEEEE
T ss_pred --CCcEEEEcCCCCEEEEEec------------------------------------------------CCCeEEEEECC
Confidence 1568999999998887611 1123555565
Q ss_pred CCc---ee-EcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC-ceEEEec--cCCCcccCCccc
Q 002194 322 DGT---VK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFVRELC--DLPLAEDIPIAF 394 (954)
Q Consensus 322 ~G~---~~-~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g-~~~~~l~--~~~~~~~~p~~~ 394 (954)
+|. .. .+........++|||||++|++..... ..+.+|+++. +....+. .....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~------- 175 (343)
T 1ri6_A 115 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ------------DRICLFTVSDDGHLVAQDPAEVTTV------- 175 (343)
T ss_dssp TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG------------TEEEEEEECTTSCEEEEEEEEEECS-------
T ss_pred CCccccccccccCCCCceEEEECCCCCEEEEecCCC------------CEEEEEEecCCCceeeecccccccC-------
Confidence 442 22 222225577899999999998776222 2799999986 5544322 11100
Q ss_pred cccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec---c------cccCceeecc
Q 002194 395 NSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL---D------LRYGGISWCD 465 (954)
Q Consensus 395 ~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~---~------~~~~~~~~sp 465 (954)
....++.++|+|||+.+++. . ...+.+.+|+++. .+++.+.+... . .....++|+|
T Consensus 176 --~~~~~~~~~~~pdg~~l~~~-~-----------~~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 176 --EGAGPRHMVFHPNEQYAYCV-N-----------ELNSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp --TTCCEEEEEECTTSSEEEEE-E-----------TTTTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred --CCCCcceEEECCCCCEEEEE-e-----------CCCCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceEECC
Confidence 01234578999999976554 1 1245788888621 22333322111 1 1223589999
Q ss_pred CCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
||++|+++...++ ...+|.++..++............ .+.. ++|+|||++|+...
T Consensus 241 dg~~l~v~~~~~~-~i~v~d~~~~~~~~~~~~~~~~~~-~~~~------~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 241 DGRHLYACDRTAS-LITVFSVSEDGSVLSKEGFQPTET-QPRG------FNVDHSGKYLIAAG 295 (343)
T ss_dssp TSSEEEEEETTTT-EEEEEEECTTSCCEEEEEEEECSS-SCCC------EEECTTSSEEEEEC
T ss_pred CCCEEEEEecCCC-EEEEEEEcCCCCceEEeeeecCCC-ccce------EEECCCCCEEEEec
Confidence 9999877654332 355555554343212121121111 1222 78999999888765
No 175
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.63 E-value=8.6e-14 Score=153.02 Aligned_cols=289 Identities=10% Similarity=0.049 Sum_probs=167.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce-eecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
.+...+|||||+.|+-.++.. .+--...+|.++...... ...... .......+..++|+||++++...
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~---~r~Wd~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~d~~l~~~s------- 100 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLS---GRCWAGSLWLFKDPCAAPNEGFCSA-GVQTEAGVADLTWVGERGILVAS------- 100 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCS---SSCCCEEEEEESSGGGTTCGGGCSE-EEEESSCEEEEEEETTTEEEEEE-------
T ss_pred CEEEEEECCCCCEEEEEeCCc---eEEeeceeeeeccccccCCcceeee-eeccCCCEEEEEEeCCCeEEEEE-------
Confidence 577889999999888655211 111123455554221111 101000 00001126689999998755433
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeE-----cCCC-ccccccccCC
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-----IGPP-AVYTSLDPSP 341 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~-----l~~~-~~~~~~~~Sp 341 (954)
..+.|.++|+ +|+... +... ..+..++|||
T Consensus 101 -------------------------------------------~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp 137 (344)
T 4gqb_B 101 -------------------------------------------DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS 137 (344)
T ss_dssp -------------------------------------------TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT
T ss_pred -------------------------------------------CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC
Confidence 1234666677 553221 1122 6788999999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~ 420 (954)
||++|+..+.+ +.|.+||+.+++. +.+..+ ...+..++|+||++.+++..
T Consensus 138 dg~~l~sgs~d-------------~~i~iwd~~~~~~~~~~~~h-------------~~~V~~~~~~~~~~~~l~s~--- 188 (344)
T 4gqb_B 138 SGTQAVSGSKD-------------ICIKVWDLAQQVVLSSYRAH-------------AAQVTCVAASPHKDSVFLSC--- 188 (344)
T ss_dssp TSSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCEEEEEECSSCTTEEEEE---
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCc-------------CCceEEEEecCCCCCceeee---
Confidence 99999988743 3899999986654 333322 24457799999998765541
Q ss_pred cCCCccccccCCCeEEEEecCCCCCCCceEEe--ecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002194 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (954)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 498 (954)
+..+.|.+||+ ..+.....+. .....+..++|+|++..++.....++ .|.++|+.++ +....
T Consensus 189 ---------s~D~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg---~v~~wd~~~~--~~~~~ 252 (344)
T 4gqb_B 189 ---------SEDNRILLWDT--RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG---TVSLVDTKST--SCVLS 252 (344)
T ss_dssp ---------ETTSCEEEEET--TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS---EEEEEESCC----CCEE
T ss_pred ---------ccccccccccc--cccceeeeeecceeeccceeeeecCCCCcceEEeccCC---cEEEEECCCC--cEEEE
Confidence 23457889996 3333334442 22334567899997665554444432 3556677664 33333
Q ss_pred ecCCCCCccCCCCCCCeeeccCCcE-EEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccc
Q 002194 499 FDRSSEDVYSDPGSPMMRRTSTGTY-VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYE 577 (954)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 577 (954)
...+...+.. ++|+|||.. |+.... ...|++||+.+++..++....+.
T Consensus 253 ~~~h~~~v~~------v~fsp~g~~~lasgs~---------------------D~~i~vwd~~~~~~~~~~~H~~~---- 301 (344)
T 4gqb_B 253 SAVHSQCVTG------LVFSPHSVPFLASLSE---------------------DCSLAVLDSSLSELFRSQAHRDF---- 301 (344)
T ss_dssp EECCSSCEEE------EEECSSSSCCEEEEET---------------------TSCEEEECTTCCEEEEECCCSSC----
T ss_pred EcCCCCCEEE------EEEccCCCeEEEEEeC---------------------CCeEEEEECCCCcEEEEcCCCCC----
Confidence 4444444444 889999964 554441 22499999999876655433321
Q ss_pred eeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002194 578 TTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (954)
Q Consensus 578 ~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g 619 (954)
+.. .+|+||++.++.+.+.. ..+.+|+++++
T Consensus 302 -V~~-------v~~sp~~~~llas~s~D---~~v~~w~v~~~ 332 (344)
T 4gqb_B 302 -VRD-------ATWSPLNHSLLTTVGWD---HQVVHHVVPTE 332 (344)
T ss_dssp -EEE-------EEECSSSTTEEEEEETT---SCEEEEECCC-
T ss_pred -EEE-------EEEeCCCCeEEEEEcCC---CeEEEEECCCC
Confidence 222 47999998877665532 34777876553
No 176
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.63 E-value=3.6e-16 Score=158.86 Aligned_cols=190 Identities=15% Similarity=0.125 Sum_probs=132.2
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccH-HHHHHHHCCcEEEEcCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGST-SVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~G~~V~~~~~~~~~G 725 (954)
.+|.+++++.+.|++ ..+.|+||++||+..... .| ... ....|+++||.|+. .+..|
T Consensus 14 ~~g~~l~~~~~~p~~-----~~~~~~vv~~hG~~~~~~-----------~~---~~~~~~~~l~~~G~~v~~---~d~~g 71 (210)
T 1imj_A 14 VQGQALFFREALPGS-----GQARFSVLLLHGIRFSSE-----------TW---QNLGTLHRLAQAGYRAVA---IDLPG 71 (210)
T ss_dssp ETTEEECEEEEECSS-----SCCSCEEEECCCTTCCHH-----------HH---HHHTHHHHHHHTTCEEEE---ECCTT
T ss_pred eCCeEEEEEEeCCCC-----CCCCceEEEECCCCCccc-----------ee---ecchhHHHHHHCCCeEEE---ecCCC
Confidence 489999999998864 123789999999642110 01 111 36678889999999 45556
Q ss_pred CCCcccch--hhHHHHH--HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCC
Q 002194 726 EGDEEAND--RFVEQLV--ACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF 801 (954)
Q Consensus 726 ~G~~~~~~--~~~~~~~--~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~ 801 (954)
+|.+.... ....... +|+..+++.+ +.++++++|||+||.+++.++.++|++++++|+++|.....
T Consensus 72 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~---- 141 (210)
T 1imj_A 72 LGHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK---- 141 (210)
T ss_dssp SGGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----
T ss_pred CCCCCCCCCcchhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc----
Confidence 66654322 1112222 5555555554 34689999999999999999999999999999999864310
Q ss_pred CCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcc
Q 002194 802 GFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE 881 (954)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 881 (954)
.....+.++++|+|+++|++|. ++ .+.++++ +.+ .+++++++++++|.+. .+
T Consensus 142 -------------------~~~~~~~~~~~p~l~i~g~~D~-~~--~~~~~~~-~~~----~~~~~~~~~~~~H~~~-~~ 193 (210)
T 1imj_A 142 -------------------INAANYASVKTPALIVYGDQDP-MG--QTSFEHL-KQL----PNHRVLIMKGAGHPCY-LD 193 (210)
T ss_dssp -------------------SCHHHHHTCCSCEEEEEETTCH-HH--HHHHHHH-TTS----SSEEEEEETTCCTTHH-HH
T ss_pred -------------------ccchhhhhCCCCEEEEEcCccc-CC--HHHHHHH-hhC----CCCCEEEecCCCcchh-hc
Confidence 0112334578999999999999 87 7776665 433 3579999999999863 34
Q ss_pred cHHHHHHHHHHHHHH
Q 002194 882 SIMHVLWETDRWLQK 896 (954)
Q Consensus 882 ~~~~~~~~i~~fl~~ 896 (954)
....+.+.+.+||++
T Consensus 194 ~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 194 KPEEWHTGLLDFLQG 208 (210)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHh
Confidence 456677888888865
No 177
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.63 E-value=4.9e-14 Score=153.50 Aligned_cols=273 Identities=10% Similarity=0.078 Sum_probs=167.4
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCC-C-ceeeeecCC
Q 002194 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-G-QEIEIQGFP 186 (954)
Q Consensus 110 ~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~-~-~~~~lt~~~ 186 (954)
.+..++|||++ +.|+..+.+ ..|.+|++..+... + ..+.+.++
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D---------------------------------~~v~~W~~~~~~~~~~~~~~~~~~h- 64 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRD---------------------------------KTLISWKLTGDDQKFGVPVRSFKGH- 64 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETT---------------------------------SEEEEEEEEEETTEEEEEEEEEECC-
T ss_pred eEEEEEccCCCccEEEEecCC---------------------------------ccEEEecCCCCCccccccceEEeCC-
Confidence 45678999976 677777765 57899998532100 0 11233332
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
...+....|+|||++|+.... ...|.++|+.+++..+........ +..+.|+|+++.|+...
T Consensus 65 -~~~v~~~~~s~dg~~l~s~s~---------D~~v~~wd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s---- 126 (319)
T 3frx_A 65 -SHIVQDCTLTADGAYALSASW---------DKTLRLWDVATGETYQRFVGHKSD----VMSVDIDKKASMIISGS---- 126 (319)
T ss_dssp -SSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSCEEEEEE----
T ss_pred -cccEEEEEECCCCCEEEEEeC---------CCEEEEEECCCCCeeEEEccCCCc----EEEEEEcCCCCEEEEEe----
Confidence 246888999999999888652 567888899888765443333322 67899999999888761
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-ccccccccCCC--
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPD-- 342 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpD-- 342 (954)
. ...|.++++ ......+... ..+..+.|+|+
T Consensus 127 -----------------~----------------------------D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 127 -----------------R----------------------------DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp -----------------T----------------------------TSCEEEEETTSCEEEEECCCSSCEEEEEECCC--
T ss_pred -----------------C----------------------------CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCC
Confidence 1 123556677 3344444444 66677788885
Q ss_pred ----CcEEEEEeecCCcccccccCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002194 343 ----EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (954)
Q Consensus 343 ----Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~ 417 (954)
+..|+..+.+ +.+.+||+...+.. .+..+ ...+..++|+|||+.|+..
T Consensus 162 ~~~~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~sp~g~~l~s~- 214 (319)
T 3frx_A 162 ADDDSVTIISAGND-------------KMVKAWNLNQFQIEADFIGH-------------NSNINTLTASPDGTLIASA- 214 (319)
T ss_dssp ----CCEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------CSCEEEEEECTTSSEEEEE-
T ss_pred CCCCccEEEEEeCC-------------CEEEEEECCcchhheeecCC-------------CCcEEEEEEcCCCCEEEEE-
Confidence 4466666533 38999999865543 22222 2345679999999976655
Q ss_pred EeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002194 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (954)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (954)
+..+.|.+|++ ..++..........+..++|+|||..|+..... + .++|.++... ...
T Consensus 215 ------------~~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~--i~v~~~~~~~----~~~ 272 (319)
T 3frx_A 215 ------------GKDGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-G--IKVFSLDPQY----LVD 272 (319)
T ss_dssp ------------ETTCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-E--EEEEEETTEE----EEE
T ss_pred ------------eCCCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-C--cEEEEeCcCe----eee
Confidence 44568999996 444332223344567889999999988876532 2 5666655321 111
Q ss_pred EecCCCCCcc--CCCCCCCeeeccCCcEEEEEE
Q 002194 498 LFDRSSEDVY--SDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 498 l~~~~~~~~~--~~~~~~~~~~spdG~~l~~~~ 528 (954)
.......... .......++|||||++|+...
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 1111100000 000011278999999998776
No 178
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.9e-14 Score=163.07 Aligned_cols=268 Identities=10% Similarity=0.105 Sum_probs=170.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+....+ +.|.+|+. ++ .....+.. +..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~i~~~--~~--~~~~~~~~--~~~ 150 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN---------------------------------GELRLWNK--TG--ALLNVLNF--HRA 150 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEET--TS--CEEEEECC--CCS
T ss_pred ceEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEeC--CC--CeeeeccC--CCc
Confidence 56788999999999998775 47899985 22 33444433 234
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc-----------cccccceeEecCCeEE
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-----------NAIFDNFVWVNNSTLL 258 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~-----------~~~~~~~~wspDG~~l 258 (954)
.+..+.|+|||+.|+.... ...|.++++.+++............ ...+..+.|+|++.++
T Consensus 151 ~v~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDV---------ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFV 221 (425)
T ss_dssp CEEEEEECTTSSEEEEEET---------TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEE
T ss_pred cEEEEEECCCCCEEEEEec---------CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEE
Confidence 7889999999999988652 4578888888776654433322110 0004578899998744
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-cccc
Q 002194 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYT 335 (954)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~ 335 (954)
+.. ....|+++++ +++. ..+... ..+.
T Consensus 222 ~~~--------------------------------------------------~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 222 IPG--------------------------------------------------PKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp EEC--------------------------------------------------GGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred EEc--------------------------------------------------CCCeEEEEEcCCCceeeeeccCCCceE
Confidence 432 2345888888 6543 334333 6778
Q ss_pred ccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCce
Q 002194 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (954)
Q Consensus 336 ~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~ 414 (954)
.++|+|||++|+..+.+ +.+.+||+..++. ..+..+ ...+..+.|+||| .++
T Consensus 252 ~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDD-------------GTLRIWHGGNGNSQNCFYGH-------------SQSIVSASWVGDD-KVI 304 (425)
T ss_dssp EEEEETTTTEEEEEETT-------------SCEEEECSSSBSCSEEECCC-------------SSCEEEEEEETTT-EEE
T ss_pred EEEECCCCCEEEEEcCC-------------CEEEEEECCCCccceEecCC-------------CccEEEEEECCCC-EEE
Confidence 89999999999887733 3899999886532 333221 1345679999999 333
Q ss_pred EEEEeccCCCccccccCCCeEEEEecCCCCCCC-ceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCC
Q 002194 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (954)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (954)
.. +..+.|.+|++ ..++ ...+..+...+..++|+|||+.|+....++. ..+|. +.++..
T Consensus 305 ~~-------------~~d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--i~i~~--~~~~~~ 364 (425)
T 1r5m_A 305 SC-------------SMDGSVRLWSL---KQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ--VNVYD--LKKLNS 364 (425)
T ss_dssp EE-------------ETTSEEEEEET---TTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC--EEEEE--CHHHHC
T ss_pred EE-------------eCCCcEEEEEC---CCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe--EEEEE--CCCCcc
Confidence 33 33558999996 3333 3344455667788999999999888764432 44554 443210
Q ss_pred ------------------CcEEEecCCCC--CccCCCCCCCeeeccCCcEEEEEE
Q 002194 494 ------------------APRILFDRSSE--DVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 494 ------------------~~~~l~~~~~~--~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
........+.. .+.. +.|+|||++|+...
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 365 KSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFD------LSWNCAGNKISVAY 413 (425)
T ss_dssp --------------CEECCEEEEECCTTCCCCEEE------EEECTTSSEEEEEE
T ss_pred ceeeeecccccccCcccchhhhhhcCcccCCceEE------EEccCCCceEEEEe
Confidence 02222222211 3333 88999999888776
No 179
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.63 E-value=1.6e-14 Score=154.10 Aligned_cols=210 Identities=11% Similarity=0.135 Sum_probs=132.4
Q ss_pred EcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCC
Q 002194 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (954)
Q Consensus 645 ~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~ 724 (954)
...+|.+++.... + + -|.||++||++.... .|. .....|+++||.|++ +|.+
T Consensus 12 ~~~~g~~l~y~~~---G-----~--g~~vvllHG~~~~~~-----------~w~----~~~~~l~~~g~~vi~---~D~~ 63 (281)
T 3fob_A 12 ENQAPIEIYYEDH---G-----T--GKPVVLIHGWPLSGR-----------SWE----YQVPALVEAGYRVIT---YDRR 63 (281)
T ss_dssp ETTEEEEEEEEEE---S-----S--SEEEEEECCTTCCGG-----------GGT----TTHHHHHHTTEEEEE---ECCT
T ss_pred CCCCceEEEEEEC---C-----C--CCeEEEECCCCCcHH-----------HHH----HHHHHHHhCCCEEEE---eCCC
Confidence 4556777765443 1 1 356888999752211 121 235567889999999 6777
Q ss_pred CCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh-CCCcccEEEEeccCCCCCC---
Q 002194 725 GEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTL--- 798 (954)
Q Consensus 725 G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~~--- 798 (954)
|+|.+..+ ........+|+.+.++.+ +.+++.|+||||||.+++.+++. .|++++++|++++......
T Consensus 64 G~G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 137 (281)
T 3fob_A 64 GFGKSSQPWEGYEYDTFTSDLHQLLEQL------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSE 137 (281)
T ss_dssp TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCS
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHc------CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccc
Confidence 88887543 223455667777766654 33589999999999988776665 5899999998875421110
Q ss_pred -CCCCCcc-c------------------------------cc--------hhhh------------cHHHHHhcCccccc
Q 002194 799 -TPFGFQN-E------------------------------DR--------TLWE------------ATSTYVEMSPFMSA 826 (954)
Q Consensus 799 -~~~~~~~-~------------------------------~~--------~~~~------------~~~~~~~~sp~~~~ 826 (954)
.+..... . .. ..|. ....+...+....+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l 217 (281)
T 3fob_A 138 DHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDL 217 (281)
T ss_dssp SSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred cccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhh
Confidence 0000000 0 00 0000 00011122333456
Q ss_pred CCCCCCEEEEEeCCCCCCCCchHHHHHHH-HHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFF-NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
.++++|+||+||++|..+| ++.+.+++ +.+. +.++++++++||... .+..+.+.+.+.+||+
T Consensus 218 ~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 218 EKFNIPTLIIHGDSDATVP--FEYSGKLTHEAIP----NSKVALIKGGPHGLN-ATHAKEFNEALLLFLK 280 (281)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHST----TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred hhcCCCEEEEecCCCCCcC--HHHHHHHHHHhCC----CceEEEeCCCCCchh-hhhHHHHHHHHHHHhh
Confidence 7899999999999999998 77664443 3332 358999999999863 5667788888888874
No 180
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.63 E-value=1.1e-15 Score=154.30 Aligned_cols=183 Identities=12% Similarity=0.075 Sum_probs=111.2
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC--CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR--GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~--G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av 747 (954)
.|+|||+||... ++..+ ........+.++ +|.|++ .+..|+|.+ .. +.+
T Consensus 2 mptIl~lHGf~s-----------s~~s~--k~~~l~~~~~~~~~~~~v~~---pdl~~~g~~---------~~----~~l 52 (202)
T 4fle_A 2 MSTLLYIHGFNS-----------SPSSA--KATTFKSWLQQHHPHIEMQI---PQLPPYPAE---------AA----EML 52 (202)
T ss_dssp -CEEEEECCTTC-----------CTTCH--HHHHHHHHHHHHCTTSEEEC---CCCCSSHHH---------HH----HHH
T ss_pred CcEEEEeCCCCC-----------CCCcc--HHHHHHHHHHHcCCCcEEEE---eCCCCCHHH---------HH----HHH
Confidence 389999999421 11111 011233445554 589998 445555432 22 223
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCC----CCccccchhhhcHHHHHhcCcc
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF----GFQNEDRTLWEATSTYVEMSPF 823 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~sp~ 823 (954)
+.+.+. .+.++|+|+|+||||++|+.++.++|....+++...+..+...... ......................
T Consensus 53 ~~~~~~--~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (202)
T 4fle_A 53 ESIVMD--KAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQ 130 (202)
T ss_dssp HHHHHH--HTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTC
T ss_pred HHHHHh--cCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhh
Confidence 333332 2457999999999999999999999887766665544322110000 0000000001111112223445
Q ss_pred cccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
..+.++++|+||+||++|.+|| ++++.++++ ++++.+++|++|.+... +++++.|.+||+
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp--~~~s~~l~~-------~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~ 190 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLD--YRQAVAYYT-------PCRQTVESGGNHAFVGF---DHYFSPIVTFLG 190 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSC--HHHHHHHTT-------TSEEEEESSCCTTCTTG---GGGHHHHHHHHT
T ss_pred hhhhccCceEEEEEeCCCCCCC--HHHHHHHhh-------CCEEEEECCCCcCCCCH---HHHHHHHHHHHh
Confidence 5677889999999999999999 999888763 35889999999987543 356788888886
No 181
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.63 E-value=2.8e-14 Score=152.17 Aligned_cols=281 Identities=10% Similarity=0.084 Sum_probs=190.7
Q ss_pred eeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCC
Q 002194 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (954)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~ 273 (954)
-.++.||++|+|.... +...||.++.+|+..++|+... .--++++|++|+|+.......
T Consensus 19 g~~~~~g~~iy~~n~~-------d~~~ly~~~~dg~~~~~l~~~~---------~~~i~~~g~~Iyy~~~~~~~~----- 77 (302)
T 3s25_A 19 GLFCESDGEVFFSNTN-------DNGRLYAMNIDGSNIHKLSNDT---------AMYINADKNYVYYVRNNNQKI----- 77 (302)
T ss_dssp TCEEEETTEEEEEEGG-------GTTEEEEEETTSCSCEEEEEEE---------EEEEEECSSEEEEEEECC--------
T ss_pred eEEEEeCCEEEEEeCC-------CCceEEEEcCCCCCCEEccCCc---------eeeEEEcCCEEEEEECCCCcc-----
Confidence 3567899999997632 2578999999999999997532 123679999999983221100
Q ss_pred CCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCCccccccccCCCCcEEEEEeec
Q 002194 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIH 352 (954)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~~~~~~~~~SpDGk~l~~~s~~ 352 (954)
+...+.......|+++++ +++.++|..... ..|+++|++|+|+...
T Consensus 78 ------------------------------~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~~---~~~s~~g~~Iy~~~~~ 124 (302)
T 3s25_A 78 ------------------------------TSQTFFSYDRNSLCRIKRNGHGSTVLDPDPC---IYASLIGNYIYYLHYD 124 (302)
T ss_dssp ---------------------------------CCSSCCSEEEEEEETTSCCCEEEECSCE---EEEEEETTEEEEEEES
T ss_pred ------------------------------cccceeccCCCeEEEEeCCCCcceEeecCCc---cEEEEeCCEEEEEeec
Confidence 000000012456999999 456666765421 2689999999998721
Q ss_pred CCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCC
Q 002194 353 RPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR 432 (954)
Q Consensus 353 ~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~ 432 (954)
... ...|+..+++|+..++|+.... ..|+++|+.|+|. . .+.
T Consensus 125 ~~~---------~~~Iy~~~~dGs~~~~lt~~~~-----------------~~~~~~g~~iy~t-~-----------~g~ 166 (302)
T 3s25_A 125 TQT---------ATSLYRIRIDGEEKKKIKNHYL-----------------FTCNTSDRYFYYN-N-----------PKN 166 (302)
T ss_dssp SSS---------CEEEEEEETTSCCCEEEESSCC-----------------CCSEEETTEEEEE-C-----------TTT
T ss_pred CCC---------CceEEEEECCCCCeEEEeCCCc-----------------eEeeEECCEEEEE-e-----------CCC
Confidence 111 2389999999988888887421 3478899987765 1 125
Q ss_pred CeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCC
Q 002194 433 DIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGS 512 (954)
Q Consensus 433 ~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (954)
..|+++++ +|+..++|..... .. .++|+|++|+|..+.++ .+|+++++++. ..++|++...
T Consensus 167 ~~Iy~~~l---~g~~~~~l~~~~~--~~-~~~P~g~~iy~t~~~~~--~~I~~~~ldG~--~~~~Lt~~~~--------- 227 (302)
T 3s25_A 167 GQLYRYDT---ASQSEALFYDCNC--YK-PVVLDDTNVYYMDVNRD--NAIVHVNINNP--NPVVLTEANI--------- 227 (302)
T ss_dssp CCEEEEET---TTTEEEEEECSCE--EE-EEEEETTEEEEEEGGGT--TEEEEECSSSC--CCEECSCSCE---------
T ss_pred ceEEEEEC---CCCCEEEEeCCCc--cc-eeeecCCEEEEEEcCCC--cEEEEEECCCC--CeEEEeCCCc---------
Confidence 58999996 7777777754322 22 35699999999877654 68999999985 4566654321
Q ss_pred CCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCcccccc
Q 002194 513 PMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLY 592 (954)
Q Consensus 513 ~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s 592 (954)
+.++|+|++|+|... +....|+.+++++...++|...+. .+++
T Consensus 228 --~~~~~~g~~Iy~~~~-------------------~~~~~i~~~~~DG~~r~~l~~~~~----------------~~i~ 270 (302)
T 3s25_A 228 --EHYNVYGSLIFYQRG-------------------GDNPALCVVKNDGTGFKELAKGEF----------------CNIN 270 (302)
T ss_dssp --EEEEEETTEEEEEEC-------------------SSSCEEEEEETTSCCCEEEEESCE----------------EEEE
T ss_pred --ceEEECCCEEEEEEC-------------------CCCcEEEEEECCCCccEEeeCCcc----------------ceEE
Confidence 458999999988751 112579999999988888876531 1345
Q ss_pred ccCCEEEEEEecCCCCceEEEEECCCCceeEee
Q 002194 593 LNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (954)
Q Consensus 593 ~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt 625 (954)
+.+++++|+..... .|+++.+++...++|.
T Consensus 271 i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 271 VTSQYVYFTDFVSN---KEYCTSTQNPDTIKAL 300 (302)
T ss_dssp ECSSEEEEEETTTC---CEEEEESSSCCSCEEC
T ss_pred EeCCEEEEEECCCC---eEEEEECCCCCceEec
Confidence 66789998775433 3888887666556654
No 182
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.63 E-value=1.3e-14 Score=152.48 Aligned_cols=206 Identities=12% Similarity=0.008 Sum_probs=136.5
Q ss_pred EEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCC
Q 002194 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (954)
Q Consensus 643 ~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (954)
++...+|.++....+-+ .|.||++||+..... .| ......|+ +||.|++ .+
T Consensus 6 ~~~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~~~-----------~~----~~~~~~l~-~~~~vi~---~d 56 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSGS----------GPPVVLVGGALSTRA-----------GG----APLAERLA-PHFTVIC---YD 56 (262)
T ss_dssp EEECTTSCEEEEEEEEC----------SSEEEEECCTTCCGG-----------GG----HHHHHHHT-TTSEEEE---EC
T ss_pred eEEcCCCcEEEEEEcCC----------CCcEEEECCCCcChH-----------HH----HHHHHHHh-cCcEEEE---Ee
Confidence 35667898888666421 367999999642211 11 23444555 9999999 66
Q ss_pred CCCCCCcccch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCC
Q 002194 723 IIGEGDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF 801 (954)
Q Consensus 723 ~~G~G~~~~~~-~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~ 801 (954)
..|+|.+.... .......+|+.++++.+ + +++.++|||+||.+++.++.++| +++++|+++|.........
T Consensus 57 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~l------~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~ 128 (262)
T 3r0v_A 57 RRGRGDSGDTPPYAVEREIEDLAAIIDAA------G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRP 128 (262)
T ss_dssp CTTSTTCCCCSSCCHHHHHHHHHHHHHHT------T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSC
T ss_pred cCCCcCCCCCCCCCHHHHHHHHHHHHHhc------C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccc
Confidence 67888775543 22455566666666554 3 68999999999999999999999 9999999998654322110
Q ss_pred CCcccc-------------------------chhhhcHHHHH------------------------hcCcccccCCCCCC
Q 002194 802 GFQNED-------------------------RTLWEATSTYV------------------------EMSPFMSANKLKKP 832 (954)
Q Consensus 802 ~~~~~~-------------------------~~~~~~~~~~~------------------------~~sp~~~~~~~~~P 832 (954)
...... ....+..+.+. ...+...+.++++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 208 (262)
T 3r0v_A 129 PVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIP 208 (262)
T ss_dssp CCCTTHHHHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSC
T ss_pred hhhhHHHHHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCC
Confidence 000000 00000000000 01234456788999
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 833 ~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+|+++|++|..+| .+.+.++.+.+. .+++++++++||. +....+.+.+.+||+
T Consensus 209 ~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~----~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 209 TLVMDGGASPAWI--RHTAQELADTIP----NARYVTLENQTHT----VAPDAIAPVLVEFFT 261 (262)
T ss_dssp EEEEECTTCCHHH--HHHHHHHHHHST----TEEEEECCCSSSS----CCHHHHHHHHHHHHC
T ss_pred EEEEeecCCCCCC--HHHHHHHHHhCC----CCeEEEecCCCcc----cCHHHHHHHHHHHHh
Confidence 9999999999988 888888877663 3689999999993 356778888888875
No 183
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.62 E-value=3e-14 Score=151.36 Aligned_cols=212 Identities=14% Similarity=0.143 Sum_probs=135.6
Q ss_pred EEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC
Q 002194 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (954)
+.+.+|.+++...+- + .|.||++||.+.... .| ...+..|+++||.|++ .+.
T Consensus 3 ~~~~~g~~l~y~~~g--------~--g~~vvllHG~~~~~~-----------~w----~~~~~~l~~~g~~vi~---~D~ 54 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG--------Q--GRPVVFIHGWPLNGD-----------AW----QDQLKAVVDAGYRGIA---HDR 54 (274)
T ss_dssp EECTTSCEEEEEEEC--------S--SSEEEEECCTTCCGG-----------GG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEecC--------C--CceEEEECCCcchHH-----------HH----HHHHHHHHhCCCeEEE---EcC
Confidence 456788888765541 1 367999999642111 11 1345678889999999 677
Q ss_pred CCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCcccEEEEeccCCCCCC--
Q 002194 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (954)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (954)
+|+|.+... ........+|+.+.++.+ +.+++.++||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (274)
T 1a8q_A 55 RGHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS 128 (274)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccc
Confidence 788887543 223456677777776664 345899999999999999877775 899999999886421100
Q ss_pred --CCCCCcccc------------------------c--------------hhhhc-----H-------HHHHhcCccccc
Q 002194 799 --TPFGFQNED------------------------R--------------TLWEA-----T-------STYVEMSPFMSA 826 (954)
Q Consensus 799 --~~~~~~~~~------------------------~--------------~~~~~-----~-------~~~~~~sp~~~~ 826 (954)
.+....... . ..|.. . ..+...+....+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (274)
T 1a8q_A 129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL 208 (274)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred ccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHh
Confidence 000000000 0 00000 0 001111223356
Q ss_pred CCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcc--cHHHHHHHHHHHHH
Q 002194 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE--SIMHVLWETDRWLQ 895 (954)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~i~~fl~ 895 (954)
.++++|+|+++|++|..+| ++...+.+..+. .++++++++++||... .+ ..+.+.+.|.+||+
T Consensus 209 ~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQII---PNAELKVYEGSSHGIA-MVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTTT-TSTTHHHHHHHHHHHHHT
T ss_pred hcCCCCEEEEecCcCCCCC--cHHHHHHHHhhC---CCceEEEECCCCCcee-cccCCHHHHHHHHHHHhc
Confidence 7889999999999999998 775544443332 2368999999999875 34 67788888998874
No 184
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.62 E-value=1.8e-13 Score=148.29 Aligned_cols=266 Identities=15% Similarity=0.122 Sum_probs=171.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+....+ +.|.+|++.. + .....+.. +..
T Consensus 25 ~v~~~~~s~~~~~l~s~~~d---------------------------------g~i~iw~~~~-~--~~~~~~~~--h~~ 66 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSAD---------------------------------KLIKIWGAYD-G--KFEKTISG--HKL 66 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred cEEEEEECCCCCEEEEeeCC---------------------------------CeEEEEeCCC-c--ccchhhcc--CCC
Confidence 46678999999999998875 5789999853 2 22333433 224
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+....|+|||+.|+.... ...|.++|+++++........... +..+.|+|+++.|+...
T Consensus 67 ~v~~~~~~~~~~~l~s~~~---------d~~i~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~~------- 126 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASD---------DKTLKIWDVSSGKCLKTLKGHSNY----VFCCNFNPQSNLIVSGS------- 126 (312)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred ceEEEEEcCCCCEEEEECC---------CCEEEEEECCCCcEEEEEcCCCCC----EEEEEEcCCCCEEEEEe-------
Confidence 6888999999999988652 557888898887765443333322 66889999999888761
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l 346 (954)
....|.++|+ +++ ...+... ..+..+.|+|||+.|
T Consensus 127 ------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 127 ------------------------------------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp ------------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ------------------------------------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence 1234777788 664 3444444 677889999999999
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~ 425 (954)
+..+.+ +.+.+||+..++. ..+.... ...+..++|+|||+.++..
T Consensus 165 ~~~~~d-------------~~i~~wd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~--------- 210 (312)
T 4ery_A 165 VSSSYD-------------GLCRIWDTASGQCLKTLIDDD------------NPPVSFVKFSPNGKYILAA--------- 210 (312)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEECCSS------------CCCEEEEEECTTSSEEEEE---------
T ss_pred EEEeCC-------------CcEEEEECCCCceeeEEeccC------------CCceEEEEECCCCCEEEEE---------
Confidence 887743 3899999986543 3332211 1223568999999976665
Q ss_pred cccccCCCeEEEEecCCCCCCC-ceEEeeccccc--Cceeec-cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC
Q 002194 426 KVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRY--GGISWC-DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (954)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~--~~~~~s-pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 501 (954)
+..+.|.+|++ ..++ ...+..+.... ....|+ ++++.|+..+.++ .|.++++.++ +.......
T Consensus 211 ----~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~--~~~~~~~~ 277 (312)
T 4ery_A 211 ----TLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN----LVYIWNLQTK--EIVQKLQG 277 (312)
T ss_dssp ----ETTTEEEEEET---TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS----CEEEEETTTC--CEEEEECC
T ss_pred ----cCCCeEEEEEC---CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC----EEEEEECCCc--hhhhhhhc
Confidence 34568899996 3333 23333332222 223455 4566666554332 3555666664 33333444
Q ss_pred CCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 502 SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
+...+.. ++|+|++..++...
T Consensus 278 h~~~v~~------~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 278 HTDVVIS------TACHPTENIIASAA 298 (312)
T ss_dssp CSSCEEE------EEECSSSSEEEEEE
T ss_pred cCCcEEE------EeecCcCCceEEEE
Confidence 4444444 78999999888765
No 185
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=3.4e-13 Score=157.59 Aligned_cols=322 Identities=8% Similarity=0.016 Sum_probs=184.1
Q ss_pred eceEEEEccCCCCCCce-eeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEEC--CCCceeecccCCC
Q 002194 163 TGIGIHQLFPDGKLGQE-IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV--DTGKARPLFQSPD 239 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~-~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~--~~g~~~~lt~~~~ 239 (954)
..|.+||..+ ++. ..+. .+..+..++|||||++|+.... ...|.++|+ .+++...-.....
T Consensus 159 ~~V~v~D~~t----~~~~~~i~---~g~~~~~v~~spdg~~l~v~~~---------d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 159 GQIALVDGDS----KKIVKVID---TGYAVHISRMSASGRYLLVIGR---------DARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp TEEEEEETTT----CCEEEEEE---CSTTEEEEEECTTSCEEEEEET---------TSEEEEEETTSSSCEEEEEEECCS
T ss_pred CeEEEEECCC----ceEEEEEe---cCcccceEEECCCCCEEEEECC---------CCeEEEEECcCCCCcEEEEEecCC
Confidence 4688998743 332 2232 2223667889999999887652 267899998 6665543333222
Q ss_pred ccccccccceeEec----CCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccce
Q 002194 240 IYLNAIFDNFVWVN----NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQ 315 (954)
Q Consensus 240 ~~~~~~~~~~~wsp----DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~ 315 (954)
. ...++||| ||++|+++.. ...+
T Consensus 223 ~-----p~~va~sp~~~~dg~~l~v~~~------------------------------------------------~~~~ 249 (543)
T 1nir_A 223 E-----ARSVESSKFKGYEDRYTIAGAY------------------------------------------------WPPQ 249 (543)
T ss_dssp E-----EEEEEECCSTTCTTTEEEEEEE------------------------------------------------ESSE
T ss_pred C-----cceEEeCCCcCCCCCEEEEEEc------------------------------------------------cCCe
Confidence 1 56889999 9999987610 1234
Q ss_pred EEEEEe-CCceeE-cCCC------------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEe
Q 002194 316 LVLVSL-DGTVKE-IGPP------------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVREL 381 (954)
Q Consensus 316 l~~~~~-~G~~~~-l~~~------------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l 381 (954)
|.++|. +++... +... ..+..+.+||||+.++++... .+.|++||....+...+
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~ 317 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTV 317 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCccee
Confidence 566676 554322 2211 144568899999988776532 23899999875332111
Q ss_pred ccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE-Eeeccc--cc
Q 002194 382 CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLDL--RY 458 (954)
Q Consensus 382 ~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~-l~~~~~--~~ 458 (954)
+..+. ...+..+.|+|||+.++.. . ...+.|.+||+ .+++... +..... ..
T Consensus 318 ~~i~~-----------~~~~~~~~~spdg~~l~va-~-----------~~~~~v~v~D~---~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 318 TSIGA-----------APFLHDGGWDSSHRYFMTA-A-----------NNSNKVAVIDS---KDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp EEEEC-----------CSSCCCEEECTTSCEEEEE-E-----------GGGTEEEEEET---TTTEEEEEEECSSSBCCT
T ss_pred EEecc-----------CcCccCceECCCCCEEEEE-e-----------cCCCeEEEEEC---CCCeEEEeeccCCCCCCC
Confidence 11111 1234578999999966443 1 22457888996 4444333 221111 11
Q ss_pred Cceee-ccCCceEEEEEeccccceEEEEEcCCCCC-----CCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeecc
Q 002194 459 GGISW-CDDSLALVYESWYKTRRTRTWVISPGSKD-----VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKEN 532 (954)
Q Consensus 459 ~~~~~-spDg~~l~~~~~~~~~~~~l~~~d~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 532 (954)
....| +||+..++.+..... ..|.++++++.. .+............ ..+.++|||++|+.....
T Consensus 372 ~g~~~~~p~~g~~~~s~~~~d--~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~------~~v~~~pdg~~l~v~~~~-- 441 (543)
T 1nir_A 372 RGANFVHPKYGPVWSTSHLGD--GSISLIGTDPKNHPQYAWKKVAELQGQGGGS------LFIKTHPKSSHLYVDTTF-- 441 (543)
T ss_dssp TCEEEEETTTEEEEEEEBSSS--SEEEEEECCTTTCTTTBTSEEEEEECSCSCC------CCEECCTTCCEEEECCTT--
T ss_pred CCcccCCCCCccEEEeccCCC--ceEEEEEeCCCCCchhcCeEEEEEEcCCCCc------eEEEcCCCCCcEEEecCC--
Confidence 23344 688777665543222 235555555411 12222222222111 227899999998765410
Q ss_pred CCCcEEEEecCCCCCCC-CCCeEEEEECCCCCeE-EEec-------cCcccccceeEEeccCCccccccccCCEEEEEEe
Q 002194 533 DEGTYILLNGNGATPEG-NIPFLDLFDINTGSKE-RIWE-------SDKEKYYETTVALMSDQTEGDLYLNQLKILTSKE 603 (954)
Q Consensus 533 ~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~g~~~-~l~~-------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 603 (954)
.+.. ....|.+||+++++.. .+.. .++. ..+. .+.|++||++++++.+
T Consensus 442 -------------~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~---~~~~-------~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 442 -------------NPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA---KRVV-------QPEYNKRGDEVWFSVW 498 (543)
T ss_dssp -------------CSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC---CEEE-------EEEECSSSSEEEEEEE
T ss_pred -------------CCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC---CceE-------eccCCCCCCEEEEEee
Confidence 0000 0235999999988754 3321 0100 0111 2579999999999887
Q ss_pred cC-CCCceEEEEECCCCceeEe
Q 002194 604 SK-TENTQYYIQSWPDKKSCQI 624 (954)
Q Consensus 604 s~-~~p~~l~~~~~~~g~~~~L 624 (954)
+. .....|.++|..+++....
T Consensus 499 ~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 499 NGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp CCTTSCCEEEEEETTTTEEEEE
T ss_pred cCCCCCCeEEEEECCCceEEEe
Confidence 54 3467899999988876543
No 186
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.61 E-value=4.6e-14 Score=156.91 Aligned_cols=236 Identities=12% Similarity=0.149 Sum_probs=154.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|++...+ +.|++|++.. +.......+.. +..
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d---------------------------------~~v~i~~~~~-~~~~~~~~~~~--h~~ 53 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNN---------------------------------HEVHIYEKSG-NKWVQVHELKE--HNG 53 (372)
T ss_dssp CCCEEEECTTSSEEEEECSS---------------------------------SEEEEEEEET-TEEEEEEEEEC--CSS
T ss_pred CeEEEEECCCCCEEEEEeCC---------------------------------CEEEEEeCCC-CcEEeeeeecC--CCC
Confidence 67889999999999988664 4799999854 10002333433 234
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeec---ccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL---FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l---t~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
.+..+.|+|||+.|+... . ...|.++++++++.... ..... .+..+.|+|||+.|++..
T Consensus 54 ~v~~~~~~~~~~~l~~~~-------~--dg~i~vwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~---- 115 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCG-------T--DRNAYVWTLKGRTWKPTLVILRINR-----AARCVRWAPNEKKFAVGS---- 115 (372)
T ss_dssp CEEEEEEETTTTEEEEEE-------T--TSCEEEEEEETTEEEEEEECCCCSS-----CEEEEEECTTSSEEEEEE----
T ss_pred cccEEEEeCCCCEEEEEc-------C--CCeEEEEECCCCeeeeeEEeecCCC-----ceeEEEECCCCCEEEEEe----
Confidence 788999999999998865 2 34566667667653322 22222 267899999999998761
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc----eeEcCCC--cccccccc
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP--AVYTSLDP 339 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~----~~~l~~~--~~~~~~~~ 339 (954)
....|.++++ .+. ...+... ..+..++|
T Consensus 116 ---------------------------------------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 116 ---------------------------------------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp ---------------------------------------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred ---------------------------------------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 1123555555 333 2333222 67889999
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccC-------------------ceEEEeccCCCcccCCccccccccC
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-------------------IFVRELCDLPLAEDIPIAFNSVRKG 400 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g-------------------~~~~~l~~~~~~~~~p~~~~~~~~g 400 (954)
+|||++|+..+.+ +.+.+||+.. .....+. .....
T Consensus 151 ~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 204 (372)
T 1k8k_C 151 HPNSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-------------SSCGW 204 (372)
T ss_dssp CTTSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-------------CCSSC
T ss_pred cCCCCEEEEEcCC-------------CCEEEEEcccccccccccccccccccchhhheEecC-------------CCCCe
Confidence 9999999988743 3899999642 1222221 12234
Q ss_pred ccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccc
Q 002194 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (954)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (954)
+..+.|+|||+.++.. +..+.|.+|++ .++.....+..+...+..++|+|||+.|+.. . ++ .
T Consensus 205 v~~~~~~~~~~~l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-d~-~ 266 (372)
T 1k8k_C 205 VHGVCFSANGSRVAWV-------------SHDSTVCLADA--DKKMAVATLASETLPLLAVTFITESSLVAAG-H-DC-F 266 (372)
T ss_dssp EEEEEECSSSSEEEEE-------------ETTTEEEEEEG--GGTTEEEEEECSSCCEEEEEEEETTEEEEEE-T-TS-S
T ss_pred EEEEEECCCCCEEEEE-------------eCCCEEEEEEC--CCCceeEEEccCCCCeEEEEEecCCCEEEEE-e-CC-e
Confidence 5679999999866655 33557899996 2333445555566677889999999977765 3 22 3
Q ss_pred eEEEEEcC
Q 002194 481 TRTWVISP 488 (954)
Q Consensus 481 ~~l~~~d~ 488 (954)
..+|.++.
T Consensus 267 i~i~~~~~ 274 (372)
T 1k8k_C 267 PVLFTYDS 274 (372)
T ss_dssp CEEEEEET
T ss_pred EEEEEccC
Confidence 67777765
No 187
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.61 E-value=1.2e-14 Score=155.55 Aligned_cols=214 Identities=16% Similarity=0.102 Sum_probs=140.5
Q ss_pred EEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCC
Q 002194 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (954)
Q Consensus 642 ~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~ 721 (954)
..+...+|.+++...+-|+ + .|.||++||++..... .| ...+..| ++||.|++ .
T Consensus 5 ~~~~~~~g~~l~~~~~G~~------~--~~~vvllHG~~~~~~~----------~w----~~~~~~L-~~~~~vi~---~ 58 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPV------E--GPALFVLHGGPGGNAY----------VL----REGLQDY-LEGFRVVY---F 58 (286)
T ss_dssp EEEEECSSCEEEEEEESCT------T--SCEEEEECCTTTCCSH----------HH----HHHHGGG-CTTSEEEE---E
T ss_pred eeEEeECCEEEEEEeecCC------C--CCEEEEECCCCCcchh----------HH----HHHHHHh-cCCCEEEE---E
Confidence 3455568888988776542 1 3679999996421100 01 1223334 57999999 6
Q ss_pred CCCCCCCccc-c----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC
Q 002194 722 PIIGEGDEEA-N----DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (954)
Q Consensus 722 ~~~G~G~~~~-~----~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (954)
|.+|+|.+.. + ........+|+.+.++.+ +.+++.|+||||||.+|+.++.++|+ ++++|++++....
T Consensus 59 Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~ 131 (286)
T 2yys_A 59 DQRGSGRSLELPQDPRLFTVDALVEDTLLLAEAL------GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNF 131 (286)
T ss_dssp CCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBH
T ss_pred CCCCCCCCCCCccCcccCcHHHHHHHHHHHHHHh------CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCc
Confidence 7778888865 3 223556677777777665 23589999999999999999999999 9999999875421
Q ss_pred CCC--CC-------C-------Ccc----cc-----c------hhh-hc----------------HHH--H---HhcCcc
Q 002194 797 TLT--PF-------G-------FQN----ED-----R------TLW-EA----------------TST--Y---VEMSPF 823 (954)
Q Consensus 797 ~~~--~~-------~-------~~~----~~-----~------~~~-~~----------------~~~--~---~~~sp~ 823 (954)
... .. . +.. .. . ..+ .. ... + ...+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (286)
T 2yys_A 132 PWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYT 211 (286)
T ss_dssp HHHHHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCG
T ss_pred HHHHHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChh
Confidence 000 00 0 000 00 0 000 00 000 0 011222
Q ss_pred cccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
..+.++++|+|+++|++|..+| .. ++++.+ +... +++++|++||... .+..+.+.+.|.+||.+.
T Consensus 212 ~~l~~i~~P~lvi~G~~D~~~~--~~-~~~~~~-~~~~----~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 212 PYLTPERRPLYVLVGERDGTSY--PY-AEEVAS-RLRA----PIRVLPEAGHYLW-IDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp GGCCCCSSCEEEEEETTCTTTT--TT-HHHHHH-HHTC----CEEEETTCCSSHH-HHCHHHHHHHHHHHHHTT
T ss_pred hhhhhcCCCEEEEEeCCCCcCC--Hh-HHHHHh-CCCC----CEEEeCCCCCCcC-hhhHHHHHHHHHHHHHhh
Confidence 3466789999999999999998 78 888877 7543 7889999999864 556778889999999763
No 188
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.61 E-value=7.8e-15 Score=154.00 Aligned_cols=212 Identities=17% Similarity=0.133 Sum_probs=131.2
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++...+-+ + .|.||++||++... ...| ...+..|+++||.|++ .+.+|+
T Consensus 9 ~~g~~l~~~~~g~------~---~~~vvllHG~~~~~----------~~~~----~~~~~~l~~~g~~vi~---~D~~G~ 62 (254)
T 2ocg_A 9 VNGVQLHYQQTGE------G---DHAVLLLPGMLGSG----------ETDF----GPQLKNLNKKLFTVVA---WDPRGY 62 (254)
T ss_dssp ETTEEEEEEEEEC------C---SEEEEEECCTTCCH----------HHHC----HHHHHHSCTTTEEEEE---ECCTTS
T ss_pred ECCEEEEEEEecC------C---CCeEEEECCCCCCC----------ccch----HHHHHHHhhCCCeEEE---ECCCCC
Confidence 3788887655421 1 35788999953110 0011 1345566778999999 666788
Q ss_pred CCcccch-hhH-HHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC------
Q 002194 727 GDEEAND-RFV-EQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL------ 798 (954)
Q Consensus 727 G~~~~~~-~~~-~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~------ 798 (954)
|.+.... .+. ....+++..+++++.+. +.+++.++||||||.+|+.++.++|++++++|++++......
T Consensus 63 G~S~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 139 (254)
T 2ocg_A 63 GHSRPPDRDFPADFFERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIY 139 (254)
T ss_dssp TTCCSSCCCCCTTHHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHH
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHH
Confidence 8775421 110 11223334444444443 346899999999999999999999999999999886422110
Q ss_pred ---CCCC-Cccccch-------------hhhc-HHHHHhc-------CcccccCCCCCCEEEEEeCCCCCCCCchHHHHH
Q 002194 799 ---TPFG-FQNEDRT-------------LWEA-TSTYVEM-------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDR 853 (954)
Q Consensus 799 ---~~~~-~~~~~~~-------------~~~~-~~~~~~~-------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~ 853 (954)
.... +...... .|.. ...+... .....+.++++|+|++||++|..+| ...++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~ 217 (254)
T 2ocg_A 140 EGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP--RFHADF 217 (254)
T ss_dssp HTTSCGGGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC--HHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC--HHHHHH
Confidence 0000 0000000 0000 0001110 1123567889999999999999998 888887
Q ss_pred HHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
+.+.+.. .+++++|++||... .+..+.+.+.+.+||
T Consensus 218 ~~~~~~~----~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 218 IHKHVKG----SRLHLMPEGKHNLH-LRFADEFNKLAEDFL 253 (254)
T ss_dssp HHHHSTT----CEEEEETTCCTTHH-HHTHHHHHHHHHHHH
T ss_pred HHHhCCC----CEEEEcCCCCCchh-hhCHHHHHHHHHHHh
Confidence 7776543 48899999999874 456677788888887
No 189
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.61 E-value=7.6e-15 Score=158.45 Aligned_cols=213 Identities=12% Similarity=0.088 Sum_probs=140.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002194 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (954)
Q Consensus 648 ~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G 727 (954)
+|.++.....-+ .|+||++||.+.... .|. ..+..|+++||.|++ .+..|+|
T Consensus 17 ~g~~l~~~~~g~----------~~~vv~~HG~~~~~~-----------~~~----~~~~~l~~~g~~v~~---~d~~G~G 68 (309)
T 3u1t_A 17 EGATIAYVDEGS----------GQPVLFLHGNPTSSY-----------LWR----NIIPYVVAAGYRAVA---PDLIGMG 68 (309)
T ss_dssp TTEEEEEEEEEC----------SSEEEEECCTTCCGG-----------GGT----TTHHHHHHTTCEEEE---ECCTTST
T ss_pred CCeEEEEEEcCC----------CCEEEEECCCcchhh-----------hHH----HHHHHHHhCCCEEEE---EccCCCC
Confidence 788887655421 478999999642211 121 235567889999999 5666788
Q ss_pred Ccccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCcc
Q 002194 728 DEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN 805 (954)
Q Consensus 728 ~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~ 805 (954)
.+.... .......+|+.++++.+ +.+++.|+|||+||.+++.++.++|++++++|++++..........+..
T Consensus 69 ~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 142 (309)
T 3u1t_A 69 DSAKPDIEYRLQDHVAYMDGFIDAL------GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEA 142 (309)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHH------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGG
T ss_pred CCCCCCcccCHHHHHHHHHHHHHHc------CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccc
Confidence 775532 33456667777766665 3358999999999999999999999999999999876442210000000
Q ss_pred --------------c------------------------cchhhhcHHHHHh-----------------c----------
Q 002194 806 --------------E------------------------DRTLWEATSTYVE-----------------M---------- 820 (954)
Q Consensus 806 --------------~------------------------~~~~~~~~~~~~~-----------------~---------- 820 (954)
. .....+....+.. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T 3u1t_A 143 MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAE 222 (309)
T ss_dssp GHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHH
T ss_pred cchhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhh
Confidence 0 0000000000000 0
Q ss_pred ----CcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 821 ----SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 821 ----sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
+....+.++++|+|+++|++|..+| ...+.++.+.+.. .++++++++||... .+....+.+.|.+||++
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 295 (309)
T 3u1t_A 223 AEVLKNGEWLMASPIPKLLFHAEPGALAP--KPVVDYLSENVPN----LEVRFVGAGTHFLQ-EDHPHLIGQGIADWLRR 295 (309)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSTT----EEEEEEEEESSCHH-HHCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCEEEEecCCCCCCC--HHHHHHHHhhCCC----CEEEEecCCcccch-hhCHHHHHHHHHHHHHh
Confidence 0112245678999999999999998 8888788776643 47777799999763 56678889999999999
Q ss_pred hcccC
Q 002194 897 YCVSN 901 (954)
Q Consensus 897 ~l~~~ 901 (954)
.....
T Consensus 296 ~~~~~ 300 (309)
T 3u1t_A 296 NKPHA 300 (309)
T ss_dssp HCCCC
T ss_pred cchhh
Confidence 86543
No 190
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.61 E-value=6.7e-15 Score=158.11 Aligned_cols=213 Identities=19% Similarity=0.147 Sum_probs=136.1
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++...+-+. . +.|.||++||++.... .| . .....++++||.|++ .|.+|+
T Consensus 12 ~~g~~l~~~~~g~~-----~--~~~~vvllHG~~~~~~-----------~~---~-~~~~~l~~~g~~vi~---~D~~G~ 66 (293)
T 1mtz_A 12 VNGIYIYYKLCKAP-----E--EKAKLMTMHGGPGMSH-----------DY---L-LSLRDMTKEGITVLF---YDQFGC 66 (293)
T ss_dssp ETTEEEEEEEECCS-----S--CSEEEEEECCTTTCCS-----------GG---G-GGGGGGGGGTEEEEE---ECCTTS
T ss_pred ECCEEEEEEEECCC-----C--CCCeEEEEeCCCCcch-----------hH---H-HHHHHHHhcCcEEEE---ecCCCC
Confidence 46888876665321 1 1367899999642111 11 1 112234678999999 677788
Q ss_pred CCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC-----
Q 002194 727 GDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL----- 798 (954)
Q Consensus 727 G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~----- 798 (954)
|.+.... .......+|+.+.++.+. +.+++.|+||||||.+|+.+|.++|++++++|++++......
T Consensus 67 G~S~~~~~~~~~~~~~~~dl~~~~~~l~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (293)
T 1mtz_A 67 GRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEM 141 (293)
T ss_dssp TTSCCCCGGGCSHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHH
T ss_pred ccCCCCCCCcccHHHHHHHHHHHHHHhc-----CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHH
Confidence 8876542 234566777777777662 124899999999999999999999999999999987643100
Q ss_pred ------CCCC-------------Cccc-c--------------chhhhcH-----------HHHH---------------
Q 002194 799 ------TPFG-------------FQNE-D--------------RTLWEAT-----------STYV--------------- 818 (954)
Q Consensus 799 ------~~~~-------------~~~~-~--------------~~~~~~~-----------~~~~--------------- 818 (954)
.+.. +... . ...|... ..+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 142 NRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred HHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceeccccccc
Confidence 0000 0000 0 0000000 0010
Q ss_pred hcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 819 EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 819 ~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
..+....+.++++|+|+++|++| .++ +..++++.+.+. ++++++++++||... .+..+.+.+.+.+||.++
T Consensus 222 ~~~~~~~l~~i~~P~lii~G~~D-~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 222 DWDITDKISAIKIPTLITVGEYD-EVT--PNVARVIHEKIA----GSELHVFRDCSHLTM-WEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTC-SSC--HHHHHHHHHHST----TCEEEEETTCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred CCChhhhhccCCCCEEEEeeCCC-CCC--HHHHHHHHHhCC----CceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHhc
Confidence 01112345567899999999999 666 777777777653 358999999999864 456778889999999765
No 191
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.61 E-value=1.8e-13 Score=151.47 Aligned_cols=264 Identities=10% Similarity=0.070 Sum_probs=165.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+..+.+ +.|.+|+..+ + .....+.. ...
T Consensus 66 ~V~~~~~s~d~~~l~s~s~D---------------------------------g~v~vWd~~~-~--~~~~~~~~--~~~ 107 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQD---------------------------------GKVIVWDSFT-T--NKEHAVTM--PCT 107 (354)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SEEEEEETTT-C--CEEEEEEC--SSS
T ss_pred eEEEEEECCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--CcceEEec--CCC
Confidence 46789999999999998876 5799999854 2 22333332 223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc-------eeecccCCCccccccccceeEecCCeEEEEEe
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (954)
.+...+|||||+.|+... . ...+.++++..+. ...+..+.. .+..+.|+||++.|+...
T Consensus 108 ~v~~~~~sp~g~~lasg~-------~--d~~i~v~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~t~s 173 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGG-------L--DNKCSVYPLTFDKNENMAAKKKSVAMHTN-----YLSACSFTNSDMQILTAS 173 (354)
T ss_dssp CCCEEEECTTSSEEEEES-------T--TSEEEEEECCCCTTCCSGGGCEEEEECSS-----CEEEEEECSSSSEEEEEE
T ss_pred CEEEEEECCCCCEEEEee-------C--CCCEEEEEEeccccccccccceeeeccCC-----cEEEEEEeCCCCEEEEEe
Confidence 688899999999988753 3 3344455543321 111211111 266889999999888661
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-cccccccc
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDP 339 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~ 339 (954)
....|.++|+ +|+. ..+... ..+...+|
T Consensus 174 -------------------------------------------------~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~ 204 (354)
T 2pbi_B 174 -------------------------------------------------GDGTCALWDVESGQLLQSFHGHGADVLCLDL 204 (354)
T ss_dssp -------------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred -------------------------------------------------CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE
Confidence 2234667788 6653 334333 55666666
Q ss_pred CC--CCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEE
Q 002194 340 SP--DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYW 416 (954)
Q Consensus 340 Sp--DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~ 416 (954)
+| +|+.|+..+.+ +.+.+||+..++. ..+..+ ...+..++|+|||+.++..
T Consensus 205 ~~~~~g~~l~sgs~D-------------g~v~~wd~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~l~s~ 258 (354)
T 2pbi_B 205 APSETGNTFVSGGCD-------------KKAMVWDMRSGQCVQAFETH-------------ESDVNSVRYYPSGDAFASG 258 (354)
T ss_dssp CCCSSCCEEEEEETT-------------SCEEEEETTTCCEEEEECCC-------------SSCEEEEEECTTSSEEEEE
T ss_pred EeCCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEecCC-------------CCCeEEEEEeCCCCEEEEE
Confidence 66 67888887743 3899999986543 333322 1345689999999866554
Q ss_pred EEeccCCCccccccCCCeEEEEecCCCCCCCce-EEeec--ccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCC
Q 002194 417 AETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-ILHKL--DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (954)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~-~l~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (954)
+..+.|.+|++ ..+... .+... ...+..++|+|||+.|+....+.. |.++|+.++
T Consensus 259 -------------s~D~~v~lwd~---~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~----i~vwd~~~~-- 316 (354)
T 2pbi_B 259 -------------SDDATCRLYDL---RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT----INVWDVLKG-- 316 (354)
T ss_dssp -------------ETTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC----EEEEETTTC--
T ss_pred -------------eCCCeEEEEEC---CCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc----EEEEECCCC--
Confidence 34557889986 333222 22221 123457899999999888765433 455565554
Q ss_pred CcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 494 ~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
........+...+.. ++|+|||++|+...
T Consensus 317 ~~~~~l~~h~~~v~~------l~~spdg~~l~sgs 345 (354)
T 2pbi_B 317 SRVSILFGHENRVST------LRVSPDGTAFCSGS 345 (354)
T ss_dssp SEEEEECCCSSCEEE------EEECTTSSCEEEEE
T ss_pred ceEEEEECCCCcEEE------EEECCCCCEEEEEc
Confidence 233333344444444 88999999998876
No 192
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.61 E-value=4.5e-15 Score=166.02 Aligned_cols=225 Identities=12% Similarity=0.012 Sum_probs=144.0
Q ss_pred CceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcE-
Q 002194 637 LQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA- 714 (954)
Q Consensus 637 ~~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~- 714 (954)
.+.+.+++.+. .|..+.+++|+|++++ +.++|+|+++||+.+. .. .........|+++|++
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~---~~~~PvlvllHG~~~~--------~~------~~~~~~~~~l~~~g~~~ 228 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWA--------QS------MPVWPVLTSLTHRQQLP 228 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHH--------HT------SCCHHHHHHHHHTTSSC
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC---CCCCCEEEEeCCHHHh--------hc------CcHHHHHHHHHHcCCCC
Confidence 45678888775 6789999999998764 2359999999995211 10 0012356678888875
Q ss_pred ---EEEcCCCCCCCCCCccc-chhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEE
Q 002194 715 ---ILGGPTTPIIGEGDEEA-NDRFVEQLVACAEAAVEEVVRRG--VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGI 788 (954)
Q Consensus 715 ---V~~~~~~~~~G~G~~~~-~~~~~~~~~~D~~~av~~l~~~~--~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v 788 (954)
|+.+++.+..++..... ...+.....+ +++.++.++. ..|+++++|+|+||||++|+.++.++|++|++++
T Consensus 229 p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~---el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~ 305 (403)
T 3c8d_A 229 PAVYVLIDAIDTTHRAHELPCNADFWLAVQQ---ELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVL 305 (403)
T ss_dssp SCEEEEECCCSHHHHHHHSSSCHHHHHHHHH---THHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEE
T ss_pred CeEEEEECCCCCccccccCCChHHHHHHHHH---HHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 88765532111100000 1112222222 4556666653 3588999999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002194 789 ARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (954)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (954)
+++|.+.+.... -. ...... +.+.. . .......|+||+||+.|..+ ..++++++++|+..|+++++.
T Consensus 306 ~~sg~~~~~~~~--~~-~~~~~~---~~~~~-~---~~~~~~~~i~l~~G~~D~~~---~~~~~~l~~~L~~~G~~v~~~ 372 (403)
T 3c8d_A 306 SQSGSYWWPHRG--GQ-QEGVLL---EKLKA-G---EVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESIFWR 372 (403)
T ss_dssp EESCCTTTTCTT--SS-SCCHHH---HHHHT-T---SSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSEEEE
T ss_pred EeccccccCCCC--CC-cHHHHH---HHHHh-c---cccCCCceEEEEeeCCCchh---HHHHHHHHHHHHhCCCCEEEE
Confidence 999976532110 00 001111 11111 1 12345678999999998653 688999999999999999999
Q ss_pred EeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 869 ILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 869 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
+||| +|.+. .....+...+.||.+..
T Consensus 373 ~~~G-gH~~~---~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 373 QVDG-GHDAL---CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp EESC-CSCHH---HHHHHHHHHHHHHHGGG
T ss_pred EeCC-CCCHH---HHHHHHHHHHHHHhccc
Confidence 9999 69752 23345666777876653
No 193
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.61 E-value=2.4e-14 Score=154.27 Aligned_cols=210 Identities=15% Similarity=0.096 Sum_probs=137.4
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++...+-|+ + .|.||++||.+... ..|....+..|+++||.|++ .|.+|+
T Consensus 8 ~~g~~l~y~~~G~~------~--~~~vvllHG~~~~~--------------~~w~~~~~~~L~~~G~~vi~---~D~rG~ 62 (298)
T 1q0r_A 8 SGDVELWSDDFGDP------A--DPALLLVMGGNLSA--------------LGWPDEFARRLADGGLHVIR---YDHRDT 62 (298)
T ss_dssp ETTEEEEEEEESCT------T--SCEEEEECCTTCCG--------------GGSCHHHHHHHHTTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEeccCC------C--CCeEEEEcCCCCCc--------------cchHHHHHHHHHhCCCEEEe---eCCCCC
Confidence 57888887766432 1 36799999964211 11122234678889999999 667788
Q ss_pred CCccc--c---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCC-CC----
Q 002194 727 GDEEA--N---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY-NR---- 796 (954)
Q Consensus 727 G~~~~--~---~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~-~~---- 796 (954)
|.+.. + ........+|+.+.++.+ +.+++.++||||||.+++.++.++|++++++|++++.. ..
T Consensus 63 G~S~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (298)
T 1q0r_A 63 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA 136 (298)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCccccc
Confidence 88764 1 123556677777777765 34589999999999999999999999999999987644 21
Q ss_pred -------------CCCCCC------C-c----cccc------------------hhhhcH-------HHHHhc-------
Q 002194 797 -------------TLTPFG------F-Q----NEDR------------------TLWEAT-------STYVEM------- 820 (954)
Q Consensus 797 -------------~~~~~~------~-~----~~~~------------------~~~~~~-------~~~~~~------- 820 (954)
...... + . .... ..+... ..+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (298)
T 1q0r_A 137 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP 216 (298)
T ss_dssp HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred chhhhhhhhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchh
Confidence 000000 0 0 0000 000000 000000
Q ss_pred ----------Ccccc-cCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHH
Q 002194 821 ----------SPFMS-ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (954)
Q Consensus 821 ----------sp~~~-~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 889 (954)
+.... +.++++|+|+++|++|..+| +..++++.+.+. ..+++++|++||.. ...+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gHe~-----p~~~~~~ 285 (298)
T 1q0r_A 217 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLIP----TARLAEIPGMGHAL-----PSSVHGP 285 (298)
T ss_dssp CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTST----TEEEEEETTCCSSC-----CGGGHHH
T ss_pred hhhhhhhcCcccccccccccCCCEEEEEeCCCccCC--HHHHHHHHHhCC----CCEEEEcCCCCCCC-----cHHHHHH
Confidence 01123 66789999999999999998 888777766543 46999999999932 2467788
Q ss_pred HHHHHHHhc
Q 002194 890 TDRWLQKYC 898 (954)
Q Consensus 890 i~~fl~~~l 898 (954)
+.+||.+++
T Consensus 286 i~~fl~~~~ 294 (298)
T 1q0r_A 286 LAEVILAHT 294 (298)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998875
No 194
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.61 E-value=8.8e-15 Score=155.64 Aligned_cols=202 Identities=13% Similarity=0.130 Sum_probs=130.0
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.++.+..+.|++ .|+||++||++.... .| ......|+++||.|++ .+..|+
T Consensus 11 ~~g~~l~~~~~g~~~--------~~~vv~~hG~~~~~~-----------~~----~~~~~~l~~~G~~v~~---~d~~G~ 64 (286)
T 3qit_A 11 FGGNQICLCSWGSPE--------HPVVLCIHGILEQGL-----------AW----QEVALPLAAQGYRVVA---PDLFGH 64 (286)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCCGG-----------GG----HHHHHHHHHTTCEEEE---ECCTTS
T ss_pred cCCceEEEeecCCCC--------CCEEEEECCCCcccc-----------hH----HHHHHHhhhcCeEEEE---ECCCCC
Confidence 588999988886432 578999999742211 11 2456778899999999 566677
Q ss_pred CCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCC
Q 002194 727 GDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG 802 (954)
Q Consensus 727 G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~ 802 (954)
|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++..........
T Consensus 65 G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 138 (286)
T 3qit_A 65 GRSSHLEMVTSYSSLTFLAQIDRVIQEL------PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKE 138 (286)
T ss_dssp TTSCCCSSGGGCSHHHHHHHHHHHHHHS------CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---C
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHhc------CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccch
Confidence 7775432 22344455555554443 3468999999999999999999999999999999987553221100
Q ss_pred ---------------------Cccccc---------hhh--hcHHHH---------------------------------
Q 002194 803 ---------------------FQNEDR---------TLW--EATSTY--------------------------------- 817 (954)
Q Consensus 803 ---------------------~~~~~~---------~~~--~~~~~~--------------------------------- 817 (954)
+..... ..+ .....+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 3qit_A 139 SAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPG 218 (286)
T ss_dssp CHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTT
T ss_pred hhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhcccccccccccc
Confidence 000000 000 000000
Q ss_pred HhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHH
Q 002194 818 VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (954)
Q Consensus 818 ~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 888 (954)
...+....+.++++|+|+++|++|..+| .+...++.+.+.. ++++++++ ||... .++...+.+
T Consensus 219 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~----~~~~~~~g-gH~~~-~e~p~~~~~ 281 (286)
T 3qit_A 219 GRSQYLEMLKSIQVPTTLVYGDSSKLNR--PEDLQQQKMTMTQ----AKRVFLSG-GHNLH-IDAAAALAS 281 (286)
T ss_dssp HHHHHHHHHHHCCSCEEEEEETTCCSSC--HHHHHHHHHHSTT----SEEEEESS-SSCHH-HHTHHHHHH
T ss_pred chhHHHHHHhccCCCeEEEEeCCCcccC--HHHHHHHHHHCCC----CeEEEeeC-CchHh-hhChHHHHH
Confidence 1111222346789999999999999998 8888887776643 48899999 99863 334444433
No 195
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.61 E-value=1.8e-14 Score=153.47 Aligned_cols=209 Identities=15% Similarity=0.104 Sum_probs=137.3
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (954)
..+|.+++...+ + + .|.||++||.+... ..| ...+..|+++||.|++ .|.+|
T Consensus 9 ~~~g~~l~y~~~---g-----~--g~pvvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~~G 60 (277)
T 1brt_A 9 NSTSIDLYYEDH---G-----T--GQPVVLIHGFPLSG-----------HSW----ERQSAALLDAGYRVIT---YDRRG 60 (277)
T ss_dssp TTEEEEEEEEEE---C-----S--SSEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECCTT
T ss_pred cCCCcEEEEEEc---C-----C--CCeEEEECCCCCcH-----------HHH----HHHHHHHhhCCCEEEE---eCCCC
Confidence 456777765544 1 1 23488899964211 111 2356678889999999 67778
Q ss_pred CCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-cccEEEEeccCCCCCCC---
Q 002194 726 EGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLT--- 799 (954)
Q Consensus 726 ~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~~~~~~--- 799 (954)
+|.+..+. .......+|+.+.++.+ +.+++.++||||||.+++.++.++|+ +++++|++++.......
T Consensus 61 ~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~ 134 (277)
T 1brt_A 61 FGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD 134 (277)
T ss_dssp STTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTT
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCcccccccc
Confidence 88886532 23456678888887776 23589999999999999999999998 99999999874321110
Q ss_pred -CCC-Cccc-----------cc-h--------hhh---------cH---HHHH------------------hcCcccccC
Q 002194 800 -PFG-FQNE-----------DR-T--------LWE---------AT---STYV------------------EMSPFMSAN 827 (954)
Q Consensus 800 -~~~-~~~~-----------~~-~--------~~~---------~~---~~~~------------------~~sp~~~~~ 827 (954)
+.. .... .. . .+. .. +.+. ..+....+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (277)
T 1brt_A 135 NPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIP 214 (277)
T ss_dssp BTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGG
T ss_pred CccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcc
Confidence 000 0000 00 0 000 00 0000 112223456
Q ss_pred CCCCCEEEEEeCCCCCCCCchHHH-HHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 828 KLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 828 ~~~~P~Lii~G~~D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
++++|+|+++|++|..+| ++.+ +.+.+.+. +.+++++|++||... .+..+.+.+.|.+||.
T Consensus 215 ~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 215 RIDVPALILHGTGDRTLP--IENTARVFHKALP----SAEYVEVEGAPHGLL-WTHAEEVNTALLAFLA 276 (277)
T ss_dssp GCCSCEEEEEETTCSSSC--GGGTHHHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred cCCCCeEEEecCCCccCC--hHHHHHHHHHHCC----CCcEEEeCCCCcchh-hhCHHHHHHHHHHHHh
Confidence 789999999999999998 7877 77766654 248899999999864 4567788888999885
No 196
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.61 E-value=1.1e-13 Score=149.51 Aligned_cols=261 Identities=11% Similarity=0.086 Sum_probs=167.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+....+ +.|.+|++.+ + ...+.+.. ...
T Consensus 15 ~V~~~~fsp~~~~l~s~~~d---------------------------------g~v~lWd~~~-~--~~~~~~~~--~~~ 56 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYS---------------------------------GRVELWNYET-Q--VEVRSIQV--TET 56 (304)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CSS
T ss_pred ceEEEEECCCCCEEEEEcCC---------------------------------CcEEEEECCC-C--ceeEEeec--cCC
Confidence 56789999999999998876 5799999854 1 12333432 223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+....|+|||++|+.... ...|.++|+++++........... +..++|+||++.|+...
T Consensus 57 ~v~~~~~~~~~~~l~s~s~---------d~~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~sgs------- 116 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSD---------DFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGS------- 116 (304)
T ss_dssp CEEEEEEEGGGTEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEeCCCCEEEEECC---------CCEEEEEECCCCcEEEEEeCCCCc----EEEEEEcCCCCEEEEEC-------
Confidence 6788899999999988652 567888898887765443333322 77899999999888661
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC-cee-EcCCC-ccccccccCC-CCc
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVK-EIGPP-AVYTSLDPSP-DEK 344 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G-~~~-~l~~~-~~~~~~~~Sp-DGk 344 (954)
....|.++|+ ++ ... .+... ..+..++|+| |++
T Consensus 117 ------------------------------------------~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 117 ------------------------------------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp ------------------------------------------TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred ------------------------------------------CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 1234666777 55 333 33333 6778899999 677
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeecc--CCCCceEEEEecc
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS--DKPSTLYWAETQD 421 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp--Dg~~i~~~~~~~~ 421 (954)
.|+..+.+ +.+.+||+..... ..+... ...++..+.|+| |++.++..
T Consensus 155 ~l~sgs~D-------------~~v~iwd~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~l~s~----- 204 (304)
T 2ynn_A 155 TFASGCLD-------------RTVKVWSLGQSTPNFTLTTG------------QERGVNYVDYYPLPDKPYMITA----- 204 (304)
T ss_dssp EEEEEETT-------------SEEEEEETTCSSCSEEEECC------------CTTCEEEEEECCSTTCCEEEEE-----
T ss_pred EEEEEeCC-------------CeEEEEECCCCCccceeccC------------CcCcEEEEEEEEcCCCCEEEEE-----
Confidence 88777633 3899999974432 222211 112334567776 55544433
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 501 (954)
+..+.|.+|++ .++.....+..+...+..++|+|+++.|+..+.++. |.++|+.++ +.......
T Consensus 205 --------s~D~~i~iWd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~----i~iWd~~~~--~~~~~~~~ 268 (304)
T 2ynn_A 205 --------SDDLTIKIWDY--QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT----LKIWNSSTY--KVEKTLNV 268 (304)
T ss_dssp --------ETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC----EEEEETTTC--CEEEEECC
T ss_pred --------cCCCeEEEEeC--CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe----EEEEECCCC--ceeeeccC
Confidence 34568999996 233334555666777888999999998887765543 444456554 22333333
Q ss_pred CCCCccCCCCCCCeeeccCCc
Q 002194 502 SSEDVYSDPGSPMMRRTSTGT 522 (954)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~ 522 (954)
....+.. ++|+|+|.
T Consensus 269 ~~~~~~~------~~~~~~~~ 283 (304)
T 2ynn_A 269 GLERSWC------IATHPTGR 283 (304)
T ss_dssp SSSSEEE------EEECTTCG
T ss_pred CCccEEE------EEECCCCC
Confidence 3333333 67888885
No 197
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.61 E-value=4.1e-14 Score=157.72 Aligned_cols=249 Identities=13% Similarity=0.113 Sum_probs=152.4
Q ss_pred ceEEEEEEcCC--Ce--EEEEEEEcCCCCCCCCCCCccEEEEECCCCCc--CcccCccccCCCCC-C---CCcccHHHHH
Q 002194 638 QKELIKYQRKD--GV--QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFK--SKDAAGQVRGSPNE-F---PRIGSTSVLL 707 (954)
Q Consensus 638 ~~~~~~~~~~~--g~--~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~--~~~~~~~~~~~~~~-~---~~~~~~~~~~ 707 (954)
...++.|.+.| |. .+.+.++.|.+.. .+.|+|.|.||-... ...++-....+... . ..+.......
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~ 149 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG 149 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence 56677776654 54 4889999998632 248999999995311 11111111110000 0 0111234556
Q ss_pred H-HHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC----C
Q 002194 708 W-LARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP----H 782 (954)
Q Consensus 708 l-a~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p----~ 782 (954)
| +++||+|+. .|+.|.|............+.|.++++..+. +.-...+++++|||+||.++++++...| +
T Consensus 150 ~~l~~G~~Vv~---~Dy~G~G~~y~~~~~~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~yape 224 (462)
T 3guu_A 150 WALQQGYYVVS---SDHEGFKAAFIAGYEEGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAESYAPE 224 (462)
T ss_dssp HHHHTTCEEEE---ECTTTTTTCTTCHHHHHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTT
T ss_pred HHHhCCCEEEE---ecCCCCCCcccCCcchhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChhhcCc
Confidence 7 899999999 5555666554433332334445555554443 2212479999999999999999887543 3
Q ss_pred -cccEEEEeccCCCCCCC-------C------------------C------CCccc----------c-------------
Q 002194 783 -LFCCGIARSGAYNRTLT-------P------------------F------GFQNE----------D------------- 807 (954)
Q Consensus 783 -~~~a~v~~~~~~~~~~~-------~------------------~------~~~~~----------~------------- 807 (954)
.++++++.++.+|.... . + .+... .
T Consensus 225 l~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~ 304 (462)
T 3guu_A 225 LNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPF 304 (462)
T ss_dssp SEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTT
T ss_pred cceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhcc
Confidence 58888888876652100 0 0 00000 0
Q ss_pred ---------chhhhc---HHHHHhcCccc-----ccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEe
Q 002194 808 ---------RTLWEA---TSTYVEMSPFM-----SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVIL 870 (954)
Q Consensus 808 ---------~~~~~~---~~~~~~~sp~~-----~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~ 870 (954)
..+... .+.+.++..-. .-.+.++|+||+||++|.+|| +.++++++++++..|.+++++.|
T Consensus 305 ~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP--~~~s~~l~~~l~~~G~~V~~~~y 382 (462)
T 3guu_A 305 LNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVP--YQPAATYVKEQCAKGANINFSPY 382 (462)
T ss_dssp CCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCC--HHHHHHHHHHHHHcCCCeEEEEE
Confidence 000000 01111111100 123567899999999999999 99999999999999999999999
Q ss_pred CCCCCcCCCcccHHHHHHHHHHHHHHhcccC
Q 002194 871 PFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (954)
Q Consensus 871 ~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (954)
++++|.... ...+..+++||++++...
T Consensus 383 ~~~~H~~~~----~~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 383 PIAEHLTAE----IFGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp SSCCHHHHH----HHTHHHHHHHHHHHHHTC
T ss_pred CcCCccCch----hhhHHHHHHHHHHHhCCC
Confidence 999998642 123678899999998754
No 198
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.61 E-value=2.3e-14 Score=151.62 Aligned_cols=211 Identities=16% Similarity=0.148 Sum_probs=139.0
Q ss_pred EEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC
Q 002194 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (954)
Q Consensus 644 ~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (954)
+...+|.+++...+-+. ..|+||++||..... ..| . .....| +++|.|++ .|.
T Consensus 9 ~~~~~g~~l~y~~~G~~--------~~p~lvl~hG~~~~~-----------~~w---~-~~~~~L-~~~~~vi~---~D~ 61 (266)
T 3om8_A 9 LATSDGASLAYRLDGAA--------EKPLLALSNSIGTTL-----------HMW---D-AQLPAL-TRHFRVLR---YDA 61 (266)
T ss_dssp EECTTSCEEEEEEESCT--------TSCEEEEECCTTCCG-----------GGG---G-GGHHHH-HTTCEEEE---ECC
T ss_pred EeccCCcEEEEEecCCC--------CCCEEEEeCCCccCH-----------HHH---H-HHHHHh-hcCcEEEE---EcC
Confidence 45679999987776432 158899999964211 112 1 223344 45899999 677
Q ss_pred CCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC-
Q 002194 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP- 800 (954)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~- 800 (954)
+|+|.+.... .......+|+.+.++.+ ..+++.++||||||.+++.++.++|++++++|++++........
T Consensus 62 rG~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~ 135 (266)
T 3om8_A 62 RGHGASSVPPGPYTLARLGEDVLELLDAL------EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQ 135 (266)
T ss_dssp TTSTTSCCCCSCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhH
Confidence 7888886432 23456677777776665 23589999999999999999999999999999987642211000
Q ss_pred C-----------CCcccc--------chhh--------hc---------H-------HHHHhcCcccccCCCCCCEEEEE
Q 002194 801 F-----------GFQNED--------RTLW--------EA---------T-------STYVEMSPFMSANKLKKPILLVH 837 (954)
Q Consensus 801 ~-----------~~~~~~--------~~~~--------~~---------~-------~~~~~~sp~~~~~~~~~P~Lii~ 837 (954)
+ ...... ...+ +. . ..+...+....+.++++|+|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~ 215 (266)
T 3om8_A 136 WDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIA 215 (266)
T ss_dssp HHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEE
T ss_pred HHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEE
Confidence 0 000000 0000 00 0 00111122335677899999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
|++|..+| +..++.+.+.+.. .++++++ +||.. ..+..+.+.+.+.+||.
T Consensus 216 G~~D~~~~--~~~~~~l~~~ip~----a~~~~i~-~gH~~-~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 216 GAYDTVTA--ASHGELIAASIAG----ARLVTLP-AVHLS-NVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp ETTCSSSC--HHHHHHHHHHSTT----CEEEEES-CCSCH-HHHCHHHHHHHHHHHHT
T ss_pred eCCCCCCC--HHHHHHHHHhCCC----CEEEEeC-CCCCc-cccCHHHHHHHHHHHhc
Confidence 99999998 8888888877654 3888888 69976 46777888888888874
No 199
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.60 E-value=1.2e-14 Score=154.02 Aligned_cols=197 Identities=15% Similarity=0.125 Sum_probs=131.0
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (954)
.|+||++||.+... ..| ......| +++|.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 15 ~~~vvllHG~~~~~-----------~~w----~~~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 75 (268)
T 3v48_A 15 APVVVLISGLGGSG-----------SYW----LPQLAVL-EQEYQVVC---YDQRGTGNNPDTLAEDYSIAQMAAELHQA 75 (268)
T ss_dssp CCEEEEECCTTCCG-----------GGG----HHHHHHH-HTTSEEEE---CCCTTBTTBCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCccH-----------HHH----HHHHHHH-hhcCeEEE---ECCCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 58899999963211 111 1233334 56899999 7778888885431 2345556666665
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC-CCCcc--------------c-----
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FGFQN--------------E----- 806 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~~~~~--------------~----- 806 (954)
++.+ +.+++.++||||||.+++.++.++|++++++|++++........ ..+.. .
T Consensus 76 l~~l------~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 76 LVAA------GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp HHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc------CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhh
Confidence 5543 23589999999999999999999999999999988743211000 00000 0
Q ss_pred -cchhhh--------------------------cHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHH
Q 002194 807 -DRTLWE--------------------------ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALK 859 (954)
Q Consensus 807 -~~~~~~--------------------------~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~ 859 (954)
....|. ....+...+....+.++++|+|+++|++|..+| ...++++.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~l~~~~p 227 (268)
T 3v48_A 150 LYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVP--TACSSELHAALP 227 (268)
T ss_dssp HSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred cCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccC--HHHHHHHHHhCC
Confidence 000000 000111222334567889999999999999998 888888877654
Q ss_pred hCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 860 GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 860 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
..++++++++||.. ..+..+.+.+.|.+||.+.+
T Consensus 228 ----~~~~~~~~~~GH~~-~~e~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 228 ----DSQKMVMPYGGHAC-NVTDPETFNALLLNGLASLL 261 (268)
T ss_dssp ----SEEEEEESSCCTTH-HHHCHHHHHHHHHHHHHHHH
T ss_pred ----cCeEEEeCCCCcch-hhcCHHHHHHHHHHHHHHhc
Confidence 35889999999986 46778889999999998764
No 200
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.60 E-value=2.1e-13 Score=150.28 Aligned_cols=300 Identities=10% Similarity=0.049 Sum_probs=164.6
Q ss_pred CCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechh
Q 002194 216 SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTF 295 (954)
Q Consensus 216 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 295 (954)
+....+|.+|.++|+...+...... .....++|+|||+ |+++... .
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~-l~~~~~~--------------------~---------- 60 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDC-LYSVDKE--------------------D---------- 60 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCE-EEEEEEE--------------------T----------
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCe-EEEEEec--------------------C----------
Confidence 3456678888888877664322111 1145799999999 6655100 0
Q ss_pred hhhccCccccccccccccceEEEEEe-CCceeEcCC---C-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEE
Q 002194 296 QDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP---P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (954)
Q Consensus 296 ~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~---~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l 370 (954)
....|+++++ +|+.+.+.. . .....++|||||++|++..... +.+.+
T Consensus 61 ----------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------------~~v~v 112 (347)
T 3hfq_A 61 ----------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------------GTAEV 112 (347)
T ss_dssp ----------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------------TEEEE
T ss_pred ----------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------------CEEEE
Confidence 1346888888 776555543 2 5567789999999998887332 37889
Q ss_pred Eecc-CceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCce
Q 002194 371 WTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE 449 (954)
Q Consensus 371 ~d~~-g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~ 449 (954)
|+++ ++..+.+.........|. .......+..++|+|||+ +++. . ...+.|++|++ ..+++..
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~spdg~-l~v~-~-----------~~~~~v~~~~~--~~~g~~~ 176 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPR-PEQDGSHIHYTDLTPDNR-LAVI-D-----------LGSDKVYVYNV--SDAGQLS 176 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSS-TTCSSCCEEEEEECTTSC-EEEE-E-----------TTTTEEEEEEE--CTTSCEE
T ss_pred EEeCCCCCeeecceeecCCCCCC-ccccCCCceEEEECCCCc-EEEE-e-----------CCCCEEEEEEE--CCCCcEE
Confidence 9985 334443332211110110 000011234689999999 4332 2 12457888886 2244444
Q ss_pred EEeec----ccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEE--ecCCCCCccCCCCCCCeeeccCCcE
Q 002194 450 ILHKL----DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL--FDRSSEDVYSDPGSPMMRRTSTGTY 523 (954)
Q Consensus 450 ~l~~~----~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~spdG~~ 523 (954)
.+... ......++|+|||++|++....++ ...+|.++..++ +...+ ................++|||||++
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS-QIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-EEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC-EEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 33211 113456899999998887654443 356777766444 22222 1111110000000011789999998
Q ss_pred EEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECC-CCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEE
Q 002194 524 VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN-TGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSK 602 (954)
Q Consensus 524 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 602 (954)
|+..... ...|.+|+++ +|+.+.+...... -..-...+|||||+++++..
T Consensus 254 l~v~~~~--------------------~~~v~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 254 LYVSNRG--------------------YNTLAVFAVTADGHLTLIQQISTE---------GDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEET--------------------TTEEEEEEECGGGCEEEEEEEECS---------SSCCCEEEECTTSSEEEEEE
T ss_pred EEEEeCC--------------------CCEEEEEEECCCCcEEEeEEEecC---------CCCcCeEEECCCCCEEEEEE
Confidence 8766521 2348888876 3344433221110 00011357999999877655
Q ss_pred ecCCCCceEEEEECCCCceeEeec
Q 002194 603 ESKTENTQYYIQSWPDKKSCQITD 626 (954)
Q Consensus 603 ~s~~~p~~l~~~~~~~g~~~~Lt~ 626 (954)
.... .-.+|.++..+|+.+.+..
T Consensus 305 ~~~~-~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 305 QNTD-NATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp TTTT-EEEEEEECTTTCCEEEEEE
T ss_pred cCCC-cEEEEEEeCCCCeEEeccc
Confidence 4322 2345555777888776653
No 201
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.60 E-value=4.8e-13 Score=146.29 Aligned_cols=276 Identities=11% Similarity=0.028 Sum_probs=168.8
Q ss_pred ceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh
Q 002194 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (954)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (954)
...|+++|+.+++.......+... .....++|+|||+.++++..
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~---------------------------------- 53 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAG--PTPMVPMVAPGGRIAYATVN---------------------------------- 53 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCT--TCCCCEEECTTSSEEEEEET----------------------------------
T ss_pred CCeEEEEECCCCcEEEEEEcCCCC--CCccceEEcCCCCEEEEEeC----------------------------------
Confidence 568999999988776554433310 00457999999998887610
Q ss_pred hccCccccccccccccceEEEEEe-CCcee-EcCCCc------cccccccCCCCcEEEEEeecCCcccccccCC--CCcc
Q 002194 298 LLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPA------VYTSLDPSPDEKYILISSIHRPYSFIVPCGR--FPRQ 367 (954)
Q Consensus 298 ~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~~------~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~--~~~~ 367 (954)
....|+++|+ +|+.. .+.... ....++|||||++|++........ +... ....
T Consensus 54 --------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~---~~~~~~~~~~ 116 (337)
T 1pby_B 54 --------------KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE---LTHFEVQPTR 116 (337)
T ss_dssp --------------TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC---SSCEEECCCE
T ss_pred --------------CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccc---cccccccCce
Confidence 1245888898 77543 333222 567889999999998875221000 0000 1348
Q ss_pred eEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC
Q 002194 368 VGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG 447 (954)
Q Consensus 368 l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 447 (954)
+++||+++++........ ..+..++|+|||+.+++. .+.|+++++ .+++
T Consensus 117 i~v~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~l~~~---------------~~~i~~~d~---~~~~ 165 (337)
T 1pby_B 117 VALYDAETLSRRKAFEAP-------------RQITMLAWARDGSKLYGL---------------GRDLHVMDP---EAGT 165 (337)
T ss_dssp EEEEETTTTEEEEEEECC-------------SSCCCEEECTTSSCEEEE---------------SSSEEEEET---TTTE
T ss_pred EEEEECCCCcEEEEEeCC-------------CCcceeEECCCCCEEEEe---------------CCeEEEEEC---CCCc
Confidence 999999876544322211 234578899999987665 246889996 4444
Q ss_pred ceEEeecccccCceeeccCCceEEEEEecccc--------------------ceEEEEEcCCCCCCCcEEEe-cCCCCCc
Q 002194 448 PEILHKLDLRYGGISWCDDSLALVYESWYKTR--------------------RTRTWVISPGSKDVAPRILF-DRSSEDV 506 (954)
Q Consensus 448 ~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~--------------------~~~l~~~d~~~~~~~~~~l~-~~~~~~~ 506 (954)
.............+.|+|||+.|++....... ...|+++|+.++. ...+. .......
T Consensus 166 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~ 243 (337)
T 1pby_B 166 LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--MAMREVRIMDVFY 243 (337)
T ss_dssp EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--EEEEEEEECSSCE
T ss_pred EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC--ceEeecCCCCCce
Confidence 43322222222456899999988665432211 0158899988863 22221 1111111
Q ss_pred cCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCC
Q 002194 507 YSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQ 586 (954)
Q Consensus 507 ~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 586 (954)
.+ ++|+|||++++... ..|++||+++++.......... +
T Consensus 244 ~~------~~~s~dg~~l~~~~-----------------------~~v~~~d~~~~~~~~~~~~~~~-----~------- 282 (337)
T 1pby_B 244 FS------TAVNPAKTRAFGAY-----------------------NVLESFDLEKNASIKRVPLPHS-----Y------- 282 (337)
T ss_dssp EE------EEECTTSSEEEEEE-----------------------SEEEEEETTTTEEEEEEECSSC-----C-------
T ss_pred ee------EEECCCCCEEEEeC-----------------------CeEEEEECCCCcCcceecCCCc-----e-------
Confidence 12 78999999887662 1499999998876554443211 1
Q ss_pred ccccccccCCEEEEEEecCCCCceEEEEECCCCceeEe
Q 002194 587 TEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (954)
Q Consensus 587 ~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~L 624 (954)
...+|+|||+.+++. + ....++++++.+++....
T Consensus 283 ~~~~~s~dg~~l~~~--~--~~~~i~v~d~~~~~~~~~ 316 (337)
T 1pby_B 283 YSVNVSTDGSTVWLG--G--ALGDLAAYDAETLEKKGQ 316 (337)
T ss_dssp CEEEECTTSCEEEEE--S--BSSEEEEEETTTCCEEEE
T ss_pred eeEEECCCCCEEEEE--c--CCCcEEEEECcCCcEEEE
Confidence 125789999977764 2 246799999988875543
No 202
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.60 E-value=9.8e-14 Score=168.90 Aligned_cols=265 Identities=9% Similarity=-0.021 Sum_probs=162.9
Q ss_pred cccceeec-CCCCeEEEEEeeccccCCCCceEEEEEECCCC-ceeecccCCCccccccccceeEecCCeEEEEEecCCCC
Q 002194 190 KLNFVTWS-QDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (954)
Q Consensus 190 ~~~~~~wS-PDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (954)
....++|| |||++|||+.+.. +++..+||++|+++| +. +... +......+.|||||+.|+|+......
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~----G~~~~~l~v~dl~~g~~~--l~~~----~~~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS----GNEVYTIEFKRISDPSQT--IADK----VSGTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS----SSSCEEEEEEETTCTTCC--CCCC----EEEECSCCEECSSTTEEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCC----CCceEEEEEEECCCCCEe--CCcc----ccCceeeEEEecCCCEEEEEEECCCC
Confidence 45779999 9999999998632 445678999999998 62 2111 11114589999999999988221000
Q ss_pred CCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--eeEcCC--C-ccccccccCC
Q 002194 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGP--P-AVYTSLDPSP 341 (954)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--~~~l~~--~-~~~~~~~~Sp 341 (954)
...+||++++ ++. .+.+.. . ....++.|||
T Consensus 245 --------------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp 280 (751)
T 2xe4_A 245 --------------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA 280 (751)
T ss_dssp --------------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred --------------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence 1246999999 553 234422 1 4456789999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCc--eE--EEeccCCCcccCCccccccccCccceeeccC---CCCce
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSD---KPSTL 414 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~--~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspD---g~~i~ 414 (954)
||++|++.+.... ..+++++|++++ +. +.++... ....|++| |+.++
T Consensus 281 Dg~~l~~~~~~~~----------~~~l~~~d~~~~~~~~~~~~l~~~~----------------~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 281 DTNTLCIGSQSPE----------TAEVHLLDLRKGNAHNTLEIVRPRE----------------KGVRYDVQMHGTSHLV 334 (751)
T ss_dssp TSSEEEEEEECSS----------CEEEEEEESSSCTTCCCEEESSCCC----------------TTCCEEEEEETTTEEE
T ss_pred CCCEEEEEecCCC----------CceEEEEECCCCCCCceeEEeecCC----------------CCceEEEeeeeCCEEE
Confidence 9999999885431 348999999864 34 4444321 23446676 88887
Q ss_pred EEEEeccCCCccccccCCCeEEEEecCCCCC-CCceE-EeecccccCceeeccCCceEEEEEeccccceEEEEEcC----
Q 002194 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQG-EGPEI-LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP---- 488 (954)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g-~~~~~-l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~---- 488 (954)
|..+.. + ..+..|+++++ ++ ++.+. +.....+..-..|+++++.|++....++ ..+|+++++
T Consensus 335 ~~t~~~-~-------a~~~~L~~~d~---~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g-~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 335 ILTNEG-G-------AVNHKLLIAPR---GQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG-LTRIWTMMADSQD 402 (751)
T ss_dssp EEECTT-T-------CTTCEEEEEET---TSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT-EEEEEEEECCTTT
T ss_pred EEeCCC-C-------CCCcEEEEEcC---CCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC-EEEEEEEeccccc
Confidence 774332 0 12458999986 33 34344 4433333332345667888988877665 478999996
Q ss_pred ---CCCCCC-cEEEecCCCCCccCCCCCCCeee----ccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECC
Q 002194 489 ---GSKDVA-PRILFDRSSEDVYSDPGSPMMRR----TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN 560 (954)
Q Consensus 489 ---~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~----spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 560 (954)
+++ + ...+.-.......+ +.+ +++++.++|..... ...+.+|.+|++
T Consensus 403 ~~~~~g--~~~~~l~l~~~~~~~~------~~~~~~~~~~~~~l~~~~ss~-----------------~~P~~~~~~d~~ 457 (751)
T 2xe4_A 403 GVFKAG--TGLREVVMEEPIFTVH------LVESQMLEYEEPTFRMEYSSL-----------------ATPNTWFDVSPQ 457 (751)
T ss_dssp SCCCTT--TCCEECCCCCSSCEEE------ECGGGCCCTTCSCEEEEEEET-----------------TEEEEEEEECTT
T ss_pred ccccCC--ccceEECCCCceeEEE------eccCcccCCCCCEEEEEEeCC-----------------CCCCEEEEEECC
Confidence 443 3 34332111100001 212 45777777766321 123469999999
Q ss_pred CCCeEEEeccC
Q 002194 561 TGSKERIWESD 571 (954)
Q Consensus 561 ~g~~~~l~~~~ 571 (954)
+++.+.++...
T Consensus 458 ~~~~~~l~~~~ 468 (751)
T 2xe4_A 458 DHSRTAVKVRE 468 (751)
T ss_dssp TCCEEEEEECC
T ss_pred CCcEEEEeccc
Confidence 99988887544
No 203
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.60 E-value=1e-13 Score=158.25 Aligned_cols=294 Identities=13% Similarity=0.111 Sum_probs=174.5
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce-eeeecCCC
Q 002194 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGFPD 187 (954)
Q Consensus 110 ~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~-~~lt~~~~ 187 (954)
.+..++|+| +++.||..+.+ +.|.||++.. +.. ..++...+
T Consensus 121 ~V~~l~~~P~~~~~lasGs~d---------------------------------g~i~lWd~~~----~~~~~~~~~~gH 163 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKG---------------------------------GDIMLWNFGI----KDKPTFIKGIGA 163 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETT---------------------------------SCEEEECSSC----CSCCEEECCCSS
T ss_pred CEEEEEEeCCCCCEEEEEeCC---------------------------------CEEEEEECCC----CCceeEEEccCC
Confidence 366789999 56677777665 5899999854 222 22221223
Q ss_pred CCcccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 188 GAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 188 ~~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
...+..+.|+| ||+.|+..+ . ...|.++|++++..+.+...... ...+..+.|+|||+.|+...
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s-------~--D~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~---- 228 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASS-------M--EGTTRLQDFKGNILRVFASSDTI--NIWFCSLDVSASSRMVVTGD---- 228 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEEC-------S--SSCEEEEETTSCEEEEEECCSSC--SCCCCCEEEETTTTEEEEEC----
T ss_pred CCCEEEEEEeCCCCCEEEEEe-------C--CCEEEEeeccCCceeEEeccCCC--CccEEEEEECCCCCEEEEEe----
Confidence 34789999999 677776643 2 34566778887766554433221 11245789999999988761
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeC-CceeEcCCC-ccccccccCCCCc
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLD-GTVKEIGPP-AVYTSLDPSPDEK 344 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~-G~~~~l~~~-~~~~~~~~SpDGk 344 (954)
....|.++|++ .....+... ..+..++|+|+++
T Consensus 229 ---------------------------------------------~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 229 ---------------------------------------------NVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp ---------------------------------------------SSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCS
T ss_pred ---------------------------------------------CCCcEeeeccCcceeEEEecccceEEeeeecCCCc
Confidence 12347777884 444445444 7788999999998
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~ 423 (954)
.++++... ++.|.+||+..... ..+... .++...+..++|+|||+.|+..
T Consensus 264 ~~~~s~s~------------d~~v~iwd~~~~~~~~~~~~~----------~~h~~~v~~~~~spdg~~l~s~------- 314 (435)
T 4e54_B 264 WFLATASV------------DQTVKIWDLRQVRGKASFLYS----------LPHRHPVNAACFSPDGARLLTT------- 314 (435)
T ss_dssp SEEEEEET------------TSBCCEEETTTCCSSSCCSBC----------CBCSSCEEECCBCTTSSEEEEE-------
T ss_pred eEEEEecC------------cceeeEEecccccccceEEEe----------eeccccccceeECCCCCeeEEE-------
Confidence 76665433 23788999875332 111110 1222456788999999977655
Q ss_pred CccccccCCCeEEEEecCCCCCCCceEEeeccc------ccCceeeccCCceEEEEEeccc--------cceEEEEEcCC
Q 002194 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYKT--------RRTRTWVISPG 489 (954)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~~~~~~~--------~~~~l~~~d~~ 489 (954)
+..+.|.+|++ .++.....+..+.. ......|+|++..++.....++ ....|.+++..
T Consensus 315 ------~~D~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~ 386 (435)
T 4e54_B 315 ------DQKSEIRVYSA--SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGN 386 (435)
T ss_dssp ------ESSSCEEEEES--SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSS
T ss_pred ------cCCCEEEEEEC--CCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECC
Confidence 34567889986 33333444432211 1234678888888877653321 11236667777
Q ss_pred CCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeE
Q 002194 490 SKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (954)
Q Consensus 490 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 565 (954)
++. ....+...+...+.. ...|+|||++|+... ...|++||+++|+.+
T Consensus 387 ~g~-~~~~l~~~~~~~v~s-----~~~fspdg~~lasg~----------------------d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 387 SGK-MMCQLYDPESSGISS-----LNEFNPMGDTLASAM----------------------GYHILIWSQQEARTR 434 (435)
T ss_dssp SCC-EEEEECCSSCCCCCC-----EEEECTTSSCEEEEC----------------------SSEEEECCCC-----
T ss_pred CCc-EEEEEeCCCCCcEEE-----EEEECCCCCEEEEEc----------------------CCcEEEEECCcCeee
Confidence 652 122233333333222 136999999887643 124999999988765
No 204
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.59 E-value=3.2e-14 Score=158.11 Aligned_cols=177 Identities=15% Similarity=0.111 Sum_probs=119.7
Q ss_pred HHHCCcEEEEcCCCCCCC--CCCcccc---------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEeeChH
Q 002194 708 WLARGFAILGGPTTPIIG--EGDEEAN---------------DRFVEQLVACAEAAVEEVVRRGVAHPSKI-AVGGHSYG 769 (954)
Q Consensus 708 la~~G~~V~~~~~~~~~G--~G~~~~~---------------~~~~~~~~~D~~~av~~l~~~~~~d~~ri-~l~G~S~G 769 (954)
|+++||.|++++ .+| +|.+... ........+|+.++++.+ +.+++ .|+|||||
T Consensus 85 l~~~g~~vi~~D---~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~G 155 (366)
T 2pl5_A 85 FDTNQYFIICSN---VIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL------GIEKLFCVAGGSMG 155 (366)
T ss_dssp EETTTCEEEEEC---CTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEEETHH
T ss_pred ccccccEEEEec---CCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc------CCceEEEEEEeCcc
Confidence 457899999944 455 5554321 113455566666665543 34688 79999999
Q ss_pred HHHHHHHHHhCCCcccEEEEeccCCCCCCC----------------CCC---C--------------------cc-----
Q 002194 770 AFMTANLLAHAPHLFCCGIARSGAYNRTLT----------------PFG---F--------------------QN----- 805 (954)
Q Consensus 770 G~~a~~~a~~~p~~~~a~v~~~~~~~~~~~----------------~~~---~--------------------~~----- 805 (954)
|.+++.++.++|++++++|++++....... .+. + ..
T Consensus 156 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (366)
T 2pl5_A 156 GMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMR 235 (366)
T ss_dssp HHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHH
T ss_pred HHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHH
Confidence 999999999999999999999986432100 000 0 00
Q ss_pred ----------------ccchhhh-----------c-------HHHHHhcCc------ccccCCCCCCEEEEEeCCCCCCC
Q 002194 806 ----------------EDRTLWE-----------A-------TSTYVEMSP------FMSANKLKKPILLVHGEEDNNSG 845 (954)
Q Consensus 806 ----------------~~~~~~~-----------~-------~~~~~~~sp------~~~~~~~~~P~Lii~G~~D~~v~ 845 (954)
.....+. . ...+...+. ...+.++++|+|++||++|..+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 315 (366)
T 2pl5_A 236 EKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYP 315 (366)
T ss_dssp HHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC
T ss_pred HHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccC
Confidence 0000000 0 011111111 12567889999999999999998
Q ss_pred CchHHHHHHHHHHHhCCCcEEEEEe-CCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 846 TLTMQSDRFFNALKGHGALCRLVIL-PFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 846 ~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
++.++++.+.+...+.+++++++ +++||... .+....+.+.|.+||++
T Consensus 316 --~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 316 --PAQSREIVKSLEAADKRVFYVELQSGEGHDSF-LLKNPKQIEILKGFLEN 364 (366)
T ss_dssp --HHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG-GSCCHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHhhhcccCeEEEEeCCCCCcchh-hcChhHHHHHHHHHHcc
Confidence 99999999999987767899999 89999875 34556888889999875
No 205
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.59 E-value=1e-14 Score=154.64 Aligned_cols=206 Identities=15% Similarity=0.099 Sum_probs=130.6
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++.... + ..|+||++||++... ..|.. ....|++ ||.|++ .+..|+
T Consensus 10 ~~~~~~~y~~~---g-------~~~~vv~~HG~~~~~-----------~~~~~----~~~~L~~-~~~vi~---~d~~G~ 60 (278)
T 3oos_A 10 TPRGKFEYFLK---G-------EGPPLCVTHLYSEYN-----------DNGNT----FANPFTD-HYSVYL---VNLKGC 60 (278)
T ss_dssp ETTEEEEEEEE---C-------SSSEEEECCSSEECC-----------TTCCT----TTGGGGG-TSEEEE---ECCTTS
T ss_pred cCCceEEEEec---C-------CCCeEEEEcCCCcch-----------HHHHH----HHHHhhc-CceEEE---EcCCCC
Confidence 46677765443 1 147899999964221 11221 2234444 999999 666788
Q ss_pred CCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC--
Q 002194 727 GDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-- 800 (954)
Q Consensus 727 G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-- 800 (954)
|.+.... .......+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++........
T Consensus 61 G~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~ 134 (278)
T 3oos_A 61 GNSDSAKNDSEYSMTETIKDLEAIREAL------YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHK 134 (278)
T ss_dssp TTSCCCSSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGST
T ss_pred CCCCCCCCcccCcHHHHHHHHHHHHHHh------CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCcccccccccc
Confidence 8775532 12344555555555443 34589999999999999999999999999999999875511000
Q ss_pred ---CCCcccc---------------------ch---hh-------------------------hcHHHH-----HhcCcc
Q 002194 801 ---FGFQNED---------------------RT---LW-------------------------EATSTY-----VEMSPF 823 (954)
Q Consensus 801 ---~~~~~~~---------------------~~---~~-------------------------~~~~~~-----~~~sp~ 823 (954)
+...... .. .| .....+ ...+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (278)
T 3oos_A 135 DSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVR 214 (278)
T ss_dssp TSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCH
T ss_pred chhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHH
Confidence 0000000 00 00 000001 122333
Q ss_pred cccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
..+.++++|+|+++|++|..+| .+.++++.+.+. ++++++++++||... .++...+.+.|.+||
T Consensus 215 ~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 215 QKLKFVKIPSFIYCGKHDVQCP--YIFSCEIANLIP----NATLTKFEESNHNPF-VEEIDKFNQFVNDTL 278 (278)
T ss_dssp HHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHST----TEEEEEETTCSSCHH-HHSHHHHHHHHHHTC
T ss_pred HHHhCCCCCEEEEEeccCCCCC--HHHHHHHHhhCC----CcEEEEcCCcCCCcc-cccHHHHHHHHHhhC
Confidence 4567889999999999999998 888888887663 469999999999864 445666666666653
No 206
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.59 E-value=3.2e-13 Score=151.75 Aligned_cols=289 Identities=12% Similarity=0.123 Sum_probs=169.7
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc--------------ccccccceeEecC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY--------------LNAIFDNFVWVNN 254 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~--------------~~~~~~~~~wspD 254 (954)
..+..++|||||++||... ...+.++++.+|+........... ....+..++|+||
T Consensus 65 ~~V~~v~fspdg~~la~g~----------~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC----------NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC----------BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CEEEEEEECCCCCEEEEEc----------CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 4688899999999998743 234566677666543322111100 0001557899999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCC-
Q 002194 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP- 331 (954)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~- 331 (954)
|+.|+... ....|.++|+ +++.. .+...
T Consensus 135 g~~l~s~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~h~ 165 (393)
T 1erj_A 135 GKFLATGA-------------------------------------------------EDRLIRIWDIENRKIVMILQGHE 165 (393)
T ss_dssp SSEEEEEE-------------------------------------------------TTSCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEc-------------------------------------------------CCCeEEEEECCCCcEEEEEccCC
Confidence 99998761 1234777788 66543 34434
Q ss_pred ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc-CC
Q 002194 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DK 410 (954)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp-Dg 410 (954)
..+..++|+|||++|+..+.+ +.+.+||+.+++........ .++..++|+| ||
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 219 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGD-------------RTVRIWDLRTGQCSLTLSIE-------------DGVTTVAVSPGDG 219 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEECSTTC
T ss_pred CCEEEEEEcCCCCEEEEecCC-------------CcEEEEECCCCeeEEEEEcC-------------CCcEEEEEECCCC
Confidence 678899999999999887743 38999999876543322211 2446788999 88
Q ss_pred CCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEE-------eecccccCceeeccCCceEEEEEeccccceE
Q 002194 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL-------HKLDLRYGGISWCDDSLALVYESWYKTRRTR 482 (954)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l-------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 482 (954)
+.++.. +..+.|.+|++ ..+.. ..+ ..+...+..++|+|||+.|+..+.++. .+
T Consensus 220 ~~l~~~-------------s~d~~v~iwd~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~--v~ 281 (393)
T 1erj_A 220 KYIAAG-------------SLDRAVRVWDS---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS--VK 281 (393)
T ss_dssp CEEEEE-------------ETTSCEEEEET---TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE--EE
T ss_pred CEEEEE-------------cCCCcEEEEEC---CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE--EE
Confidence 766554 33557888886 33332 333 234456778999999999887765432 55
Q ss_pred EEEEcCCCCC--------CCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeE
Q 002194 483 TWVISPGSKD--------VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (954)
Q Consensus 483 l~~~d~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 554 (954)
||.+...... .........+...+.. +.|+|+|++|+.... ...|
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------~~~~~~~~~l~sgs~---------------------D~~v 334 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS------VATTQNDEYILSGSK---------------------DRGV 334 (393)
T ss_dssp EEEC---------------CEEEEEECCSSCEEE------EEECGGGCEEEEEET---------------------TSEE
T ss_pred EEECCCCCCcccccCCCCCcceEEEecccCcEEE------EEECCCCCEEEEEeC---------------------CCeE
Confidence 5554322100 0111112222222333 788999998877652 2359
Q ss_pred EEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002194 555 DLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (954)
Q Consensus 555 ~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~ 616 (954)
++||+.+++.......... .+..+ .......++|+++.++.... -..+.+|+.
T Consensus 335 ~iwd~~~~~~~~~l~~h~~----~v~~v-~~~~~~~~~p~~~~l~sgs~----Dg~i~iW~~ 387 (393)
T 1erj_A 335 LFWDKKSGNPLLMLQGHRN----SVISV-AVANGSSLGPEYNVFATGSG----DCKARIWKY 387 (393)
T ss_dssp EEEETTTCCEEEEEECCSS----CEEEE-EECSSCTTCTTCEEEEEEET----TSEEEEEEE
T ss_pred EEEECCCCeEEEEECCCCC----CEEEE-EecCCcCcCCCCCEEEEECC----CCcEEECcc
Confidence 9999998886654443221 12221 11122346677765543322 245777764
No 207
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.59 E-value=1.4e-14 Score=152.07 Aligned_cols=198 Identities=10% Similarity=-0.024 Sum_probs=130.5
Q ss_pred cEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHH
Q 002194 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAV 747 (954)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av 747 (954)
|+||++||.+... ..| ......|+++||.|++ .+..|+|.+.... .......+|+.+.+
T Consensus 5 ~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 66 (258)
T 3dqz_A 5 HHFVLVHNAYHGA-----------WIW----YKLKPLLESAGHRVTA---VELAASGIDPRPIQAVETVDEYSKPLIETL 66 (258)
T ss_dssp CEEEEECCTTCCG-----------GGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSSCGGGCCSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcc-----------ccH----HHHHHHHHhCCCEEEE---ecCCCCcCCCCCCCccccHHHhHHHHHHHH
Confidence 8899999974221 112 1356778889999999 6667888875432 23455566665555
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCC-------------Cccccc------
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-------------FQNEDR------ 808 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~-------------~~~~~~------ 808 (954)
+.+ + . .+++.++|||+||.+++.++.++|++++++|++++.......... ......
T Consensus 67 ~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T 3dqz_A 67 KSL---P-E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRN 141 (258)
T ss_dssp HTS---C-T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETT
T ss_pred HHh---c-c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhc
Confidence 443 1 1 268999999999999999999999999999999885432111100 000000
Q ss_pred ---------h------h-----hhcHHHH--------------HhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHH
Q 002194 809 ---------T------L-----WEATSTY--------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (954)
Q Consensus 809 ---------~------~-----~~~~~~~--------------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (954)
. . .+....+ ............++|+|+++|++|..+| ++..+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~ 219 (258)
T 3dqz_A 142 GTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIP--CDFIRWM 219 (258)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHHHHH
T ss_pred cChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeC--HHHHHHH
Confidence 0 0 0000000 0011122222236899999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
.+.+.. .+++++|++||... .+..+.+.+.|.+|+++|+
T Consensus 220 ~~~~~~----~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 220 IDNFNV----SKVYEIDGGDHMVM-LSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HHHSCC----SCEEEETTCCSCHH-HHSHHHHHHHHHHHHHHTC
T ss_pred HHhCCc----ccEEEcCCCCCchh-hcChHHHHHHHHHHHHHhC
Confidence 776643 38889999999864 5677888999999999874
No 208
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.59 E-value=1.1e-14 Score=157.67 Aligned_cols=216 Identities=15% Similarity=0.076 Sum_probs=134.9
Q ss_pred EEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcC
Q 002194 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (954)
Q Consensus 640 ~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (954)
+...++. +|.++..+.+-|+ ..|+||++||++.... .|. ..+..|++ ||.|++
T Consensus 46 ~~~~v~~-~~~~~~~~~~g~~--------~~~~vv~lHG~~~~~~-----------~~~----~~~~~L~~-g~~vi~-- 98 (306)
T 2r11_A 46 KSFYIST-RFGQTHVIASGPE--------DAPPLVLLHGALFSST-----------MWY----PNIADWSS-KYRTYA-- 98 (306)
T ss_dssp EEEEECC-TTEEEEEEEESCT--------TSCEEEEECCTTTCGG-----------GGT----TTHHHHHH-HSEEEE--
T ss_pred ceEEEec-CCceEEEEeeCCC--------CCCeEEEECCCCCCHH-----------HHH----HHHHHHhc-CCEEEE--
Confidence 4444543 5567776664321 2578999999742211 121 23445665 999999
Q ss_pred CCCCCCC-CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC
Q 002194 720 TTPIIGE-GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (954)
Q Consensus 720 ~~~~~G~-G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (954)
.+..|+ |.+... ........+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|+++|....
T Consensus 99 -~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (306)
T 2r11_A 99 -VDIIGDKNKSIPENVSGTRTDYANWLLDVFDNL------GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETF 171 (306)
T ss_dssp -ECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBT
T ss_pred -ecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCcccc
Confidence 555566 555432 223455566666665553 3468999999999999999999999999999999987653
Q ss_pred CCCCCCCc--------c---c-----------cc-hhhhcHHHH-H-----------------hcCcccccCCCCCCEEE
Q 002194 797 TLTPFGFQ--------N---E-----------DR-TLWEATSTY-V-----------------EMSPFMSANKLKKPILL 835 (954)
Q Consensus 797 ~~~~~~~~--------~---~-----------~~-~~~~~~~~~-~-----------------~~sp~~~~~~~~~P~Li 835 (954)
........ . . .. ......+.. . .......+.++++|+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 251 (306)
T 2r11_A 172 LPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILL 251 (306)
T ss_dssp SCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEE
T ss_pred CcccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEE
Confidence 21110000 0 0 00 000000000 0 00112234577899999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 836 i~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
++|++|..+| +..+.++++.+. .++++++++++||... .+....+.+.|.+||+
T Consensus 252 i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 252 LLGEHEVIYD--PHSALHRASSFV---PDIEAEVIKNAGHVLS-MEQPTYVNERVMRFFN 305 (306)
T ss_dssp EEETTCCSSC--HHHHHHHHHHHS---TTCEEEEETTCCTTHH-HHSHHHHHHHHHHHHC
T ss_pred EEeCCCcccC--HHHHHHHHHHHC---CCCEEEEeCCCCCCCc-ccCHHHHHHHHHHHHh
Confidence 9999999998 887776665442 2368999999999763 4556777888888875
No 209
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.59 E-value=3.2e-13 Score=148.14 Aligned_cols=254 Identities=13% Similarity=0.108 Sum_probs=154.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|++...+ . ..|.+|++..++ +..+.+..++...
T Consensus 39 ~~~~~~~spdg~~l~~~~~~----------------------~----------~~v~~~~~~~~~--~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRP----------------------E----------FRVLAYRIAPDD--GALTFAAESALPG 84 (343)
T ss_dssp CCCCEEECTTSSEEEEEETT----------------------T----------TEEEEEEECTTT--CCEEEEEEEECSS
T ss_pred CCceEEECCCCCEEEEeecC----------------------C----------CeEEEEEecCCC--CceeeccccccCC
Confidence 56689999999999887763 0 267888885212 3434443333223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCC---ceeecccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG---KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g---~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
.+..++|||||++|+++.. . ...|++++++.+ +..+....... +..++|+|||+.|+++..
T Consensus 85 ~~~~~~~s~dg~~l~~~~~------~--~~~i~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~--- 148 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSY------N--AGNVSVTRLEDGLPVGVVDVVEGLDG-----CHSANISPDNRTLWVPAL--- 148 (343)
T ss_dssp CCSEEEECTTSSEEEEEET------T--TTEEEEEEEETTEEEEEEEEECCCTT-----BCCCEECTTSSEEEEEEG---
T ss_pred CCcEEEEcCCCCEEEEEec------C--CCeEEEEECCCCccccccccccCCCC-----ceEEEECCCCCEEEEecC---
Confidence 6788899999999888652 1 335666666322 22222222221 568899999998887610
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C-CceeE-----cCC--Ccccccc
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-GTVKE-----IGP--PAVYTSL 337 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~-G~~~~-----l~~--~~~~~~~ 337 (954)
....|+++++ + |+... +.. ......+
T Consensus 149 ---------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 149 ---------------------------------------------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp ---------------------------------------------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred ---------------------------------------------CCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 2245778887 4 65432 221 2455678
Q ss_pred ccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC--ceEEE---eccCCCcccCCccccccccCccceeeccCCCC
Q 002194 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG--IFVRE---LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (954)
Q Consensus 338 ~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g--~~~~~---l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~ 412 (954)
+|+|||++|++.... ...+.+|+++. ++.+. +...+.. + .....+..++|+|||+.
T Consensus 184 ~~~pdg~~l~~~~~~------------~~~i~~~~~~~~~g~~~~~~~~~~~~~~------~-~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 184 VFHPNEQYAYCVNEL------------NSSVDVWELKDPHGNIECVQTLDMMPEN------F-SDTRWAADIHITPDGRH 244 (343)
T ss_dssp EECTTSSEEEEEETT------------TTEEEEEESSCTTSCCEEEEEEECSCTT------C-CSCCCEEEEEECTTSSE
T ss_pred EECCCCCEEEEEeCC------------CCEEEEEEecCCCCcEEEEeeccccCcc------c-cccCCccceEECCCCCE
Confidence 999999999887632 23789999853 33322 2211110 0 00012346899999997
Q ss_pred ceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe--ecccccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
+++. . ...+.|.+|+++. .++..+.+. .....+..++|+|||++|+++...++ ...+|.++.++
T Consensus 245 l~v~-~-----------~~~~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~v~v~~~d~~~ 310 (343)
T 1ri6_A 245 LYAC-D-----------RTASLITVFSVSE-DGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH-HISVYEIVGEQ 310 (343)
T ss_dssp EEEE-E-----------TTTTEEEEEEECT-TSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC-EEEEEEEETTT
T ss_pred EEEE-e-----------cCCCEEEEEEEcC-CCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC-eEEEEEEcCCC
Confidence 6554 1 1245788888611 134444432 22334778999999999888764443 47788888877
Q ss_pred C
Q 002194 491 K 491 (954)
Q Consensus 491 ~ 491 (954)
+
T Consensus 311 g 311 (343)
T 1ri6_A 311 G 311 (343)
T ss_dssp T
T ss_pred c
Confidence 5
No 210
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.59 E-value=7.6e-15 Score=156.00 Aligned_cols=197 Identities=10% Similarity=0.063 Sum_probs=131.4
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch----h--hHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND----R--FVEQLVACA 743 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~----~--~~~~~~~D~ 743 (954)
.|+||++||.+.... .|. ..+..|++ ||.|++ .+..|+|.+.... . ......+|+
T Consensus 28 ~~~vv~lHG~~~~~~-----------~~~----~~~~~l~~-g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 88 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQN-----------MWR----FMLPELEK-QFTVIV---FDYVGSGQSDLESFSTKRYSSLEGYAKDV 88 (282)
T ss_dssp SCEEEEECCTTCCGG-----------GGT----TTHHHHHT-TSEEEE---CCCTTSTTSCGGGCCTTGGGSHHHHHHHH
T ss_pred CCeEEEECCCCCCcc-----------hHH----HHHHHHhc-CceEEE---EecCCCCCCCCCCCCccccccHHHHHHHH
Confidence 389999999642211 121 23445555 999999 6667888875542 1 245556666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCC----ccc-----------cc
Q 002194 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGF----QNE-----------DR 808 (954)
Q Consensus 744 ~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~----~~~-----------~~ 808 (954)
.+.++.+ +.+++.++|||+||.+++.++.++|++++++|+++|..........+ ... ..
T Consensus 89 ~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 3qvm_A 89 EEILVAL------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNY 162 (282)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcch
Confidence 6665554 34689999999999999999999999999999999864321110000 000 00
Q ss_pred hhh------------------h---------c-------HHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHH
Q 002194 809 TLW------------------E---------A-------TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (954)
Q Consensus 809 ~~~------------------~---------~-------~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (954)
..| . . ...+...+....+.++++|+|+++|++|..+| .+.+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~ 240 (282)
T 3qvm_A 163 IGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS--PEVGQYM 240 (282)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCC--HHHHHHH
T ss_pred hhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCC--HHHHHHH
Confidence 000 0 0 00011123335567889999999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
.+.+. ..+++++++++|... .+....+.+.|.+||++..
T Consensus 241 ~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 241 AENIP----NSQLELIQAEGHCLH-MTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHC-
T ss_pred HHhCC----CCcEEEecCCCCccc-ccCHHHHHHHHHHHHHhcC
Confidence 77663 369999999999874 4557788889999998754
No 211
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.59 E-value=5.4e-13 Score=146.67 Aligned_cols=265 Identities=11% Similarity=0.088 Sum_probs=165.6
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+....|||||+.|+..+. ...|.++|..+++........... +..++|+|||+.|+...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~---------Dg~v~iWd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~s~~------ 116 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQ---------DGKLIIWDSYTTNKVHAIPLRSSW----VMTCAYAPSGNYVACGG------ 116 (340)
T ss_dssp SCEEEEEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECSSSC----EEEEEECTTSSEEEEEE------
T ss_pred CceEEEEECCCCCEEEEEeC---------CCcEEEEECCCCCcceEeecCCcc----EEEEEECCCCCEEEEEe------
Confidence 46888999999999887552 457778888877654433333322 66889999999988761
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-----eeEcCCC-ccccccccCC
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-----VKEIGPP-AVYTSLDPSP 341 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-----~~~l~~~-~~~~~~~~Sp 341 (954)
. ...+.++++ +++ .+.+... +.+....|++
T Consensus 117 ---------------~----------------------------d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 117 ---------------L----------------------------DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153 (340)
T ss_dssp ---------------T----------------------------TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE
T ss_pred ---------------C----------------------------CCeEEEEECccCCCcceeEEEecCCCccEEEEEECC
Confidence 1 123455555 321 1223333 5667788999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~ 420 (954)
|++ |+..+. ++.+.+||+.+++. ..+..+ ...+..++|+|||+.++..
T Consensus 154 ~~~-l~s~s~-------------d~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~l~sg---- 202 (340)
T 1got_B 154 DNQ-IVTSSG-------------DTTCALWDIETGQQTTTFTGH-------------TGDVMSLSLAPDTRLFVSG---- 202 (340)
T ss_dssp TTE-EEEEET-------------TSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTSSEEEEE----
T ss_pred CCc-EEEEEC-------------CCcEEEEECCCCcEEEEEcCC-------------CCceEEEEECCCCCEEEEE----
Confidence 887 554442 23899999986654 333322 1345689999999855544
Q ss_pred cCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec
Q 002194 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (954)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~ 500 (954)
+..+.|.+|++ .++.....+..+...+..++|+|||+.|+..+.++. .+| +|+..+ .......
T Consensus 203 ---------~~d~~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~--v~i--wd~~~~--~~~~~~~ 265 (340)
T 1got_B 203 ---------ACDASAKLWDV--REGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT--CRL--FDLRAD--QELMTYS 265 (340)
T ss_dssp ---------ETTSCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEE--EETTTT--EEEEEEC
T ss_pred ---------eCCCcEEEEEC--CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc--EEE--EECCCC--cEEEEEc
Confidence 33567899996 233334455666777889999999999888765543 444 455543 2222221
Q ss_pred CC--CCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccce
Q 002194 501 RS--SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (954)
Q Consensus 501 ~~--~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 578 (954)
.. ...+.. ++|+|||++++.... ...|++||+.+++.......... .
T Consensus 266 ~~~~~~~v~~------~~~s~~g~~l~~g~~---------------------d~~i~vwd~~~~~~~~~~~~h~~----~ 314 (340)
T 1got_B 266 HDNIICGITS------VSFSKSGRLLLAGYD---------------------DFNCNVWDALKADRAGVLAGHDN----R 314 (340)
T ss_dssp CTTCCSCEEE------EEECTTSSEEEEEET---------------------TSEEEEEETTTCCEEEEEECCSS----C
T ss_pred cCCcccceEE------EEECCCCCEEEEECC---------------------CCeEEEEEcccCcEeeEeecCCC----c
Confidence 11 111222 789999999887762 23599999988776544332211 1
Q ss_pred eEEeccCCccccccccCCEEEEE
Q 002194 579 TVALMSDQTEGDLYLNQLKILTS 601 (954)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~ 601 (954)
+.. .+|+|||..++..
T Consensus 315 v~~-------~~~s~dg~~l~s~ 330 (340)
T 1got_B 315 VSC-------LGVTDDGMAVATG 330 (340)
T ss_dssp EEE-------EEECTTSSCEEEE
T ss_pred EEE-------EEEcCCCCEEEEE
Confidence 222 4688999876643
No 212
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.59 E-value=6.2e-15 Score=153.13 Aligned_cols=195 Identities=11% Similarity=0.060 Sum_probs=127.6
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchh-hHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR-FVEQLVACAEAAVE 748 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~-~~~~~~~D~~~av~ 748 (954)
.|+||++||...... .|. ....|+ +||.|++ .+..|+|.+..... ......+|+.++++
T Consensus 16 ~~~vv~~hG~~~~~~-----------~~~-----~~~~l~-~g~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e0x_A 16 PNTLLFVHGSGCNLK-----------IFG-----ELEKYL-EDYNCIL---LDLKGHGESKGQCPSTVYGYIDNVANFIT 75 (245)
T ss_dssp SCEEEEECCTTCCGG-----------GGT-----TGGGGC-TTSEEEE---ECCTTSTTCCSCCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHH-----------HHH-----HHHHHH-hCCEEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 689999999643211 111 112233 8999999 55667777754322 34566777777764
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHHh-CCCcccEEEEeccCCCCCCCCCCC-------------cc----cc---
Q 002194 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTLTPFGF-------------QN----ED--- 807 (954)
Q Consensus 749 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~~~~~~~-------------~~----~~--- 807 (954)
+...+...+ ++.++|||+||.+++.++.+ +|+ ++++|+++|..........+ .. ..
T Consensus 76 ~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T 3e0x_A 76 NSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNP 152 (245)
T ss_dssp HCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSH
T ss_pred hhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchH
Confidence 443333344 89999999999999999999 999 99999999876541110000 00 00
Q ss_pred -------------chhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 002194 808 -------------RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFES 874 (954)
Q Consensus 808 -------------~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 874 (954)
.............+....+.++++|+|+++|++|..+| .+.++++++.+. +++++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~g 226 (245)
T 3e0x_A 153 LSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTL--VEYSEIIKKEVE----NSELKIFETGK 226 (245)
T ss_dssp HHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHSS----SEEEEEESSCG
T ss_pred HHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCC--HHHHHHHHHHcC----CceEEEeCCCC
Confidence 00001111123344556678889999999999999998 888888877763 37999999999
Q ss_pred CcCCCcccHHHHHHHHHHHH
Q 002194 875 HGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl 894 (954)
|... .++...+.+.+.+||
T Consensus 227 H~~~-~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 227 HFLL-VVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGHH-HHTHHHHHHHHHTTC
T ss_pred cceE-EecHHHHHHHHHhhC
Confidence 9863 345555666666553
No 213
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.59 E-value=6.3e-15 Score=156.51 Aligned_cols=208 Identities=13% Similarity=0.106 Sum_probs=126.7
Q ss_pred ceEEEEEEcCC-CeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEE
Q 002194 638 QKELIKYQRKD-GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (954)
Q Consensus 638 ~~~~~~~~~~~-g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (954)
..+.+++.+.. |.++..++|+|++|++.+ ++|+|++.||+.. +..........+++ .+.+|
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~--~yPvly~l~G~~~---------------~~~~~~~~~~~l~~~~~~iv 74 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDGNAV---------------MDRLDDELLKQLSEKTPPVI 74 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTT--CEEEEEESSHHHH---------------HHHCCHHHHHHHTTSCCCEE
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCC--CCCEEEEeeChhH---------------HHHHHHHHHHHhccCCCeEE
Confidence 46778888775 689999999999987644 5998877777421 00001122344554 56777
Q ss_pred EEcCCCCCCC-----CCCcccchh----------------hHHHHHHHH--HHHHHHHHHcCCCCCCcEEEEeeChHHHH
Q 002194 716 LGGPTTPIIG-----EGDEEANDR----------------FVEQLVACA--EAAVEEVVRRGVAHPSKIAVGGHSYGAFM 772 (954)
Q Consensus 716 ~~~~~~~~~G-----~G~~~~~~~----------------~~~~~~~D~--~~av~~l~~~~~~d~~ri~l~G~S~GG~~ 772 (954)
+..++.+... ++....+.. -....+.+. .+.+.++.++..+|++|++|+|+||||++
T Consensus 75 V~v~~~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~ 154 (278)
T 2gzs_A 75 VAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLF 154 (278)
T ss_dssp EEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHH
T ss_pred EEEcCCCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHH
Confidence 7533321100 000000000 001111111 12344455556688889999999999999
Q ss_pred HHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCC------C
Q 002194 773 TANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSG------T 846 (954)
Q Consensus 773 a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~------~ 846 (954)
|+.++.+ |+.|+++++++|.+.+. . ..... ......+. ..-..|+++.||+.|..++ +
T Consensus 155 a~~~~~~-p~~f~~~~~~s~~~~~~-------~--~~~~~---~~~~~~~~---~~~~~~i~l~~G~~d~~~~~~~~~~~ 218 (278)
T 2gzs_A 155 VLDSWLS-SSYFRSYYSASPSLGRG-------Y--DALLS---RVTAVEPL---QFCTKHLAIMEGSATQGDNRETHAVG 218 (278)
T ss_dssp HHHHHHH-CSSCSEEEEESGGGSTT-------H--HHHHH---HHHTSCTT---TTTTCEEEEEECCC-----------C
T ss_pred HHHHHhC-ccccCeEEEeCcchhcC-------c--chHHH---HHHHhhcc---CCCCCcEEEEecCccccccccchhhh
Confidence 9999999 99999999999863211 0 00000 01111110 1124689999999997631 0
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEeCCCCCcCC
Q 002194 847 LTMQSDRFFNALKGHGALCRLVILPFESHGYA 878 (954)
Q Consensus 847 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 878 (954)
+..++++++++|+..|+++++.++|+++|.+.
T Consensus 219 ~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~ 250 (278)
T 2gzs_A 219 VLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM 250 (278)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH
T ss_pred hHHHHHHHHHHHHcCCCeeEEEEcCCCCccch
Confidence 16889999999999999999999999999853
No 214
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.59 E-value=1e-13 Score=153.06 Aligned_cols=291 Identities=6% Similarity=-0.016 Sum_probs=172.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||+.++.+... + . .++.|.+|++.. ++...+.......
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~--------------------~-~--------~d~~v~iw~~~~----~~~~~~~~~~~~~ 66 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNF--------------------A-R--------GTGVIQLYEIQH----GDLKLLREIEKAK 66 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC-----------------------C--------CCEEEEEEEECS----SSEEEEEEEEESS
T ss_pred ceEEEEEcCCCceEEEecCc--------------------c-C--------CCcEEEEEeCCC----CcccceeeecccC
Confidence 56788999999888766531 0 0 005799999964 3333332222334
Q ss_pred cccceeecCC---CCeEEEEEeeccccCCCCceEEEEEECCCCc-eeecccCCCccccccccce------eEecCCeEEE
Q 002194 190 KLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-ARPLFQSPDIYLNAIFDNF------VWVNNSTLLV 259 (954)
Q Consensus 190 ~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~-~~~lt~~~~~~~~~~~~~~------~wspDG~~l~ 259 (954)
.+..+.|+|| |+.|+... ....|.++++++++ ........... +..+ +|+|||+.|+
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~s~~~~~l~ 133 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGD---------FGGNLHIWNLEAPEMPVYSVKGHKEI----INAIDGIGGLGIGEGAPEIV 133 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEE---------TTSCEEEECTTSCSSCSEEECCCSSC----EEEEEEESGGGCC-CCCEEE
T ss_pred cEEEEEEcCCCCCCceEEEec---------CCCeEEEEeCCCCCccEEEEEecccc----eEEEeeccccccCCCccEEE
Confidence 6889999999 68888754 24567788888765 33222222222 4445 5689999888
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--eeEcCCC-c---
Q 002194 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP-A--- 332 (954)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--~~~l~~~-~--- 332 (954)
... ....|.++++ ++. ...+... +
T Consensus 134 ~~~-------------------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 134 TGS-------------------------------------------------RDGTVKVWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp EEE-------------------------------------------------TTSCEEEECTTSCSSCSEEECCCTTSCC
T ss_pred EEe-------------------------------------------------CCCeEEEEeCCCCCCcceeccccCCCCC
Confidence 761 1123666676 443 3333321 1
Q ss_pred -ccccc----ccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeec
Q 002194 333 -VYTSL----DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (954)
Q Consensus 333 -~~~~~----~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~ws 407 (954)
.+..+ +|+|||++|+..+.+ +.+.+||+.+++......+. ..+..+.|+
T Consensus 165 ~~v~~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~-------------~~v~~~~~~ 218 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEERVVCAGYDN-------------GDIKLFDLRNMALRWETNIK-------------NGVCSLEFD 218 (357)
T ss_dssp CCEEEEEEECCCC-CCCEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEES
T ss_pred CceEEEEEEeccCCCCCEEEEEccC-------------CeEEEEECccCceeeecCCC-------------CceEEEEcC
Confidence 33333 489999999988743 38999999987654443322 345679999
Q ss_pred c---CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe-----ecccccCceeeccCCceEEEEEecccc
Q 002194 408 S---DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-----KLDLRYGGISWCDDSLALVYESWYKTR 479 (954)
Q Consensus 408 p---Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-----~~~~~~~~~~~spDg~~l~~~~~~~~~ 479 (954)
| +++.++.. +..+.|.+|++ ..+.....+. .+...+..++|+|+|+.++++...++
T Consensus 219 ~~~~~~~~l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg- 282 (357)
T 3i2n_A 219 RKDISMNKLVAT-------------SLEGKFHVFDM--RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG- 282 (357)
T ss_dssp CSSSSCCEEEEE-------------ESTTEEEEEEE--EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-
T ss_pred CCCCCCCEEEEE-------------CCCCeEEEEeC--cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC-
Confidence 9 88876665 33557888886 2222222332 56667788999999995444444443
Q ss_pred ceEEEEEcCCCCCC---------------CcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCC
Q 002194 480 RTRTWVISPGSKDV---------------APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNG 544 (954)
Q Consensus 480 ~~~l~~~d~~~~~~---------------~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~ 544 (954)
..+||.+....... ........+...+.. ++|+|||+++++...
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~s~~--------------- 341 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS------LDWSPDKRGLCVCSS--------------- 341 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE------EEECSSSTTEEEEEE---------------
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE------EEEcCCCCeEEEEec---------------
Confidence 36677666433210 011122223333333 789999999985431
Q ss_pred CCCCCCCCeEEEEECCCCC
Q 002194 545 ATPEGNIPFLDLFDINTGS 563 (954)
Q Consensus 545 ~~~~~~~~~l~~~d~~~g~ 563 (954)
....|++||+.+.+
T Consensus 342 -----~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 342 -----FDQTVRVLIVTKLN 355 (357)
T ss_dssp -----TTSEEEEEEECC--
T ss_pred -----CCCcEEEEECCCcc
Confidence 12358889887543
No 215
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.59 E-value=3.7e-13 Score=148.32 Aligned_cols=230 Identities=13% Similarity=0.129 Sum_probs=141.8
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCcee--e-cccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR--P-LFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~--~-lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
.+...+|||||+.||... . ...|.++++++++.. . +...... .+..++|+|||++|+...
T Consensus 18 ~v~~l~~sp~g~~las~~-------~--D~~i~iw~~~~~~~~~~~~~~~~h~~----~v~~~~~sp~g~~l~s~s---- 80 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG-------G--DRRIRIWGTEGDSWICKSVLSEGHQR----TVRKVAWSPCGNYLASAS---- 80 (345)
T ss_dssp CEEEEEECTTSSCEEEEE-------T--TSCEEEEEEETTEEEEEEEECSSCSS----CEEEEEECTTSSEEEEEE----
T ss_pred cEEEEEECCCCCEEEEEc-------C--CCeEEEEEcCCCcceeeeeeccccCC----cEEEEEECCCCCEEEEEE----
Confidence 577899999999999865 3 334555565565422 1 2122222 277899999999998761
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc---eeEcCCC-ccccccccCC
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDPSP 341 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~---~~~l~~~-~~~~~~~~Sp 341 (954)
.+ ..+.++++ .+. ...+... ..+..++|+|
T Consensus 81 -----------------~D----------------------------~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 81 -----------------FD----------------------------ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp -----------------TT----------------------------SCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred -----------------CC----------------------------CcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence 11 12334454 332 3334444 6788999999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~ 420 (954)
||++|+..+.+ +.+.+||++.+. ...+.... +....+..++|+|||+.++..
T Consensus 116 ~~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~l~s~---- 168 (345)
T 3fm0_A 116 SGNLLATCSRD-------------KSVWVWEVDEEDEYECVSVLN----------SHTQDVKHVVWHPSQELLASA---- 168 (345)
T ss_dssp TSSEEEEEETT-------------SCEEEEEECTTSCEEEEEEEC----------CCCSCEEEEEECSSSSCEEEE----
T ss_pred CCCEEEEEECC-------------CeEEEEECCCCCCeEEEEEec----------CcCCCeEEEEECCCCCEEEEE----
Confidence 99999988744 389999998542 22221111 112345679999999977665
Q ss_pred cCCCccccccCCCeEEEEecCCCCCCCc---eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCC---
Q 002194 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA--- 494 (954)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~--- 494 (954)
+..+.|.+|+. ..++. ..+..+...+..++|+|||+.|+..+.++. .+||.....+....
T Consensus 169 ---------s~d~~i~~w~~---~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~--v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 169 ---------SYDDTVKLYRE---EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT--VRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp ---------ETTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEEEEECTTCTTCCCC
T ss_pred ---------eCCCcEEEEEe---cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe--EEEeccccCCCCcccee
Confidence 33456777775 33322 234556667888999999999988876554 78887644332110
Q ss_pred ------cEEE---ecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 495 ------PRIL---FDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 495 ------~~~l---~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
...+ ...+...++. ++|+|++..++...
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~------v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYD------IAWCQLTGALATAC 271 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEE------EEECTTTCCEEEEE
T ss_pred eccCCccceeEEecCCCCCcEEE------EEEecCCCEEEEEe
Confidence 0111 1112222333 78999999888766
No 216
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.59 E-value=2.6e-13 Score=150.78 Aligned_cols=204 Identities=12% Similarity=0.072 Sum_probs=126.8
Q ss_pred cccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCC
Q 002194 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (954)
Q Consensus 333 ~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~ 412 (954)
....++|||||++|++.+... ++.|.+||+.+++......+. ..+..++|||||+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~-----------d~~i~iwd~~~~~~~~~~~~~-------------~~V~~v~fspdg~~ 190 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKV-----------PAIMRIIDPSDLTEKFEIETR-------------GEVKDLHFSTDGKV 190 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCS-----------SCEEEEEETTTTEEEEEEECS-------------SCCCEEEECTTSSE
T ss_pred CEEEEEEcCCCCEEEEEECCC-----------CCEEEEeECCCCcEEEEeCCC-------------CceEEEEEccCCce
Confidence 345689999999999876332 348999999976544322221 23578999999997
Q ss_pred ceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEE--eecccccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL--HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l--~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
++.. + .+.+.+|+. .++...... ..+...+..++|+|||+.++..+..++....++.++...
T Consensus 191 l~s~-------------s-~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 191 VAYI-------------T-GSSLEVIST--VTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp EEEE-------------C-SSCEEEEET--TTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET
T ss_pred EEec-------------c-ceeEEEEEe--ccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc
Confidence 7665 2 234555653 233332222 234456778999999999998877665445667776655
Q ss_pred CCCCcEE--EecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEe
Q 002194 491 KDVAPRI--LFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (954)
Q Consensus 491 ~~~~~~~--l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 568 (954)
....... ........+.. ++|||||++|+.... ...|++||+.+++...-.
T Consensus 255 ~~~~~~~~~~~~~~~~~V~~------~~~Spdg~~lasgs~---------------------D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRFKGITS------MDVDMKGELAVLASN---------------------DNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp TEEEEEEEEEEESSCSCEEE------EEECTTSCEEEEEET---------------------TSCEEEEETTTTEEEEEE
T ss_pred ceecceeeeeecCCCCCeEe------EEECCCCCceEEEcC---------------------CCEEEEEECCCCcEEEEe
Confidence 3111111 12222233333 789999999988762 124999999988765432
Q ss_pred -ccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002194 569 -ESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (954)
Q Consensus 569 -~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~ 618 (954)
..-.. .+.. .+|||||++|+-... -..+.+++++.
T Consensus 308 ~~gH~~----~V~~-------v~fSpdg~~laS~S~----D~tvrvw~ip~ 343 (365)
T 4h5i_A 308 KQAHSF----AITE-------VTISPDSTYVASVSA----ANTIHIIKLPL 343 (365)
T ss_dssp TTSSSS----CEEE-------EEECTTSCEEEEEET----TSEEEEEECCT
T ss_pred cCcccC----CEEE-------EEECCCCCEEEEEeC----CCeEEEEEcCC
Confidence 22111 1222 579999987763322 24588888754
No 217
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.59 E-value=2.9e-13 Score=151.50 Aligned_cols=274 Identities=14% Similarity=0.116 Sum_probs=164.3
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCcee-eeecCCC
Q 002194 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI-EIQGFPD 187 (954)
Q Consensus 110 ~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~-~lt~~~~ 187 (954)
.+..++||||| +.|+..+.+ +.|.+|++.. +... .+.....
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~d---------------------------------g~i~iwd~~~----~~~~~~~~~~~h 117 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKG---------------------------------GDIILWDYDV----QNKTSFIQGMGP 117 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBT---------------------------------SCEEEEETTS----TTCEEEECCCST
T ss_pred CEEEEEECCCCCCEEEEEcCC---------------------------------CeEEEEeCCC----cccceeeecCCc
Confidence 46678999999 888887765 5799999954 2322 2221123
Q ss_pred CCcccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 188 GAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 188 ~~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
...+..+.|+| |++.|+... ....|.++|+.++....+..... ....+..++|+|||+.|+...
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~---- 182 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSS---------IRGATTLRDFSGSVIQVFAKTDS--WDYWYCCVDVSVSRQMLATGD---- 182 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEE---------TTTEEEEEETTSCEEEEEECCCC--SSCCEEEEEEETTTTEEEEEE----
T ss_pred CCceeEEEeCCCCCCEEEEEe---------CCCEEEEEECCCCceEEEeccCC--CCCCeEEEEECCCCCEEEEEC----
Confidence 34788999999 666666644 24577888888766555543331 112267899999999888761
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCC-ceeEcCCC-ccccccccCCCCc
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIGPP-AVYTSLDPSPDEK 344 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk 344 (954)
....|.++|+++ ....+... ..+..++|+|||+
T Consensus 183 ---------------------------------------------~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 183 ---------------------------------------------STGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp ---------------------------------------------TTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCT
T ss_pred ---------------------------------------------CCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCC
Confidence 124577778844 44555544 7788999999999
Q ss_pred -EEEEEeecCCcccccccCCCCcceEEEeccC----ceEEEeccCCCcccCCccccccccCccceeecc-CCCCceEEEE
Q 002194 345 -YILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYWAE 418 (954)
Q Consensus 345 -~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g----~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp-Dg~~i~~~~~ 418 (954)
.|+..+. ++.+.+||+.. +.......+ ...+..++|+| ||+.++..
T Consensus 218 ~~l~s~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~~l~~~-- 269 (383)
T 3ei3_B 218 WLMATSSV-------------DATVKLWDLRNIKDKNSYIAEMPH-------------EKPVNAAYFNPTDSTKLLTT-- 269 (383)
T ss_dssp TEEEEEET-------------TSEEEEEEGGGCCSTTCEEEEEEC-------------SSCEEEEEECTTTSCEEEEE--
T ss_pred CEEEEEeC-------------CCEEEEEeCCCCCcccceEEEecC-------------CCceEEEEEcCCCCCEEEEE--
Confidence 5555542 23899999985 222211111 13456899999 99877655
Q ss_pred eccCCCccccccCCCeEEEEecCCCCCCCceEEeeccc------ccCceeeccCCceEEEEEecc-----ccceEEEEEc
Q 002194 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYK-----TRRTRTWVIS 487 (954)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~~~~~~-----~~~~~l~~~d 487 (954)
+..+.|.+|++ .++.....+..... ..-...|+|++..++.....+ .....|.++|
T Consensus 270 -----------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd 336 (383)
T 3ei3_B 270 -----------DQRNEIRVYSS--YDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYD 336 (383)
T ss_dssp -----------ESSSEEEEEET--TBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEE
T ss_pred -----------cCCCcEEEEEC--CCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEe
Confidence 33568999996 33334444433211 111235555555544332110 0113466677
Q ss_pred CCCCCCCcEEEecCC-CCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 488 PGSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 488 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
+.++ +........ ...... .++|+|||++|+...
T Consensus 337 ~~~~--~~~~~l~~~~~~~~~~-----~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 337 ANSG--GLVHQLRDPNAAGIIS-----LNKFSPTGDVLASGM 371 (383)
T ss_dssp TTTC--CEEEEECBTTBCSCCC-----EEEECTTSSEEEEEE
T ss_pred cCCC--ceeeeecCCCCCceEE-----EEEEecCccEEEEec
Confidence 7665 223222221 111111 158999999887774
No 218
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.59 E-value=1.5e-14 Score=170.44 Aligned_cols=221 Identities=14% Similarity=0.051 Sum_probs=148.6
Q ss_pred ceEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEE
Q 002194 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (954)
Q Consensus 638 ~~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (954)
..+...+...||.+++....- ..|+||++||++.... .| ...+..|+++||.|++
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g----------~~p~vv~~HG~~~~~~-----------~~----~~~~~~l~~~G~~v~~ 290 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGFPESWY-----------SW----RYQIPALAQAGYRVLA 290 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEEC----------SSSEEEEECCTTCCGG-----------GG----TTHHHHHHHTTCEEEE
T ss_pred ccceeEEEeCCCcEEEEEEcC----------CCCEEEEEeCCCCchh-----------HH----HHHHHHHHhCCCEEEE
Confidence 345556666799998866541 2588999999742211 12 1356678899999999
Q ss_pred cCCCCCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 718 GPTTPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
.+.+|+|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++.
T Consensus 291 ---~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 291 ---MDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp ---ECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ---ecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 5666778775432 22455667777777665 3468999999999999999999999999999998875
Q ss_pred CCCCCCCCCCc-----------------------------------------------------------c-c---c-ch
Q 002194 794 YNRTLTPFGFQ-----------------------------------------------------------N-E---D-RT 809 (954)
Q Consensus 794 ~~~~~~~~~~~-----------------------------------------------------------~-~---~-~~ 809 (954)
........... . . . ..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (555)
T 3i28_A 362 FIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM 441 (555)
T ss_dssp CCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTT
T ss_pred CCCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccc
Confidence 43211100000 0 0 0 00
Q ss_pred h-hhcHHHH----------------------HhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEE
Q 002194 810 L-WEATSTY----------------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCR 866 (954)
Q Consensus 810 ~-~~~~~~~----------------------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 866 (954)
. .+....| ...+....+.++++|+|++||++|..+| ...++.+.+.+. +++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~----~~~ 515 (555)
T 3i28_A 442 VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWIP----HLK 515 (555)
T ss_dssp CCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGGTCT----TCE
T ss_pred cCHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcC--HHHHHHHHhhCC----Cce
Confidence 0 0000000 0012223445788999999999999998 888877766553 358
Q ss_pred EEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 867 LVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 867 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+++++++||... .+....+.+.|.+||++...
T Consensus 516 ~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 547 (555)
T 3i28_A 516 RGHIEDCGHWTQ-MDKPTEVNQILIKWLDSDAR 547 (555)
T ss_dssp EEEETTCCSCHH-HHSHHHHHHHHHHHHHHHTC
T ss_pred EEEeCCCCCCcc-hhCHHHHHHHHHHHHHhccC
Confidence 899999999763 46677888999999998764
No 219
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.59 E-value=5.7e-13 Score=155.63 Aligned_cols=311 Identities=13% Similarity=0.086 Sum_probs=184.8
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEc--cCCCCCCceeeeecCCCC
Q 002194 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQL--FPDGKLGQEIEIQGFPDG 188 (954)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~~~g~~~~~~~lt~~~~~ 188 (954)
+..++|||||++|+....+ +.|.+|++ .+ ++ .+..++.+
T Consensus 181 ~~~v~~spdg~~l~v~~~d---------------------------------~~V~v~D~~~~t----~~--~~~~i~~g 221 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD---------------------------------ARIDMIDLWAKE----PT--KVAEIKIG 221 (543)
T ss_dssp EEEEEECTTSCEEEEEETT---------------------------------SEEEEEETTSSS----CE--EEEEEECC
T ss_pred cceEEECCCCCEEEEECCC---------------------------------CeEEEEECcCCC----Cc--EEEEEecC
Confidence 3467799999998877654 47899998 32 22 12223344
Q ss_pred CcccceeecC----CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc-------cccccceeEecCCeE
Q 002194 189 AKLNFVTWSQ----DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-------NAIFDNFVWVNNSTL 257 (954)
Q Consensus 189 ~~~~~~~wSP----DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~-------~~~~~~~~wspDG~~ 257 (954)
....+++||| ||++|+.... ....|.++|..+++..+......... ...+..+.+|||++.
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~--------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAY--------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEE--------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEc--------cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 5678899999 9999877653 14578888988887765443221000 001456789999887
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce---eEcCCCcc
Q 002194 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV---KEIGPPAV 333 (954)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~---~~l~~~~~ 333 (954)
++++.. ....|+++|. +++. ..+.....
T Consensus 294 ~~vs~~------------------------------------------------~~g~i~vvd~~~~~~l~~~~i~~~~~ 325 (543)
T 1nir_A 294 FIVNVK------------------------------------------------ETGKVLLVNYKDIDNLTVTSIGAAPF 325 (543)
T ss_dssp EEEEET------------------------------------------------TTTEEEEEECTTSSSCEEEEEECCSS
T ss_pred EEEEEC------------------------------------------------CCCeEEEEEecCCCcceeEEeccCcC
Confidence 776510 2356888998 5432 23333355
Q ss_pred ccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCcccee-eccCCCC
Q 002194 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN-WRSDKPS 412 (954)
Q Consensus 334 ~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~-wspDg~~ 412 (954)
..++.|||||++++...... ++|.+||+++++........ ..|. .+ +... ++||+..
T Consensus 326 ~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg~l~~~i~~g---~~ph------~g-~g~~~~~p~~g~ 383 (543)
T 1nir_A 326 LHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDRRLSALVDVG---KTPH------PG-RGANFVHPKYGP 383 (543)
T ss_dssp CCCEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECS---SSBC------CT-TCEEEEETTTEE
T ss_pred ccCceECCCCCEEEEEecCC------------CeEEEEECCCCeEEEeeccC---CCCC------CC-CCcccCCCCCcc
Confidence 67889999999987776432 28999999977654322210 1111 11 2233 3688655
Q ss_pred ceEEEEeccCCCccccccCCCeEEEEecCCCC-----CCCceEEeecccccCceeeccCCceEEEEEeccc---cceEEE
Q 002194 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-----GEGPEILHKLDLRYGGISWCDDSLALVYESWYKT---RRTRTW 484 (954)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~---~~~~l~ 484 (954)
+++. .. ...+.|.+|+.++.. ....+.+.........+.++|||++|+....-+. ....|.
T Consensus 384 ~~~s-~~----------~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 384 VWST-SH----------LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp EEEE-EB----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE
T ss_pred EEEe-cc----------CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEE
Confidence 4333 11 124578889873311 1222344433444567999999999988652111 013588
Q ss_pred EEcCCCCCCCcEEEe-------cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEE
Q 002194 485 VISPGSKDVAPRILF-------DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (954)
Q Consensus 485 ~~d~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 557 (954)
++|++++......+. ......+.. +.|+|||++|++..... . .....|.+|
T Consensus 453 v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~g~~~~~s~~~~-------------~---~~~~~i~v~ 510 (543)
T 1nir_A 453 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ------PEYNKRGDEVWFSVWNG-------------K---NDSSALVVV 510 (543)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCEEEE------EEECSSSSEEEEEEECC-------------T---TSCCEEEEE
T ss_pred EEECCCCCCCeEEeechhhcccCCCCCceEe------ccCCCCCCEEEEEeecC-------------C---CCCCeEEEE
Confidence 888887632213321 011111112 78999999999886321 0 112358999
Q ss_pred ECCCCCeEEEeccC
Q 002194 558 DINTGSKERIWESD 571 (954)
Q Consensus 558 d~~~g~~~~l~~~~ 571 (954)
|.+|++........
T Consensus 511 D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 511 DDKTLKLKAVVKDP 524 (543)
T ss_dssp ETTTTEEEEEECCT
T ss_pred ECCCceEEEeecCC
Confidence 99999877665543
No 220
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.59 E-value=1.1e-14 Score=153.69 Aligned_cols=196 Identities=15% Similarity=0.133 Sum_probs=129.5
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccc----hh--hHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN----DR--FVEQLVACA 743 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~----~~--~~~~~~~D~ 743 (954)
.|+||++||.+.... .|. .....|++ ||.|++ .+..|+|.+... .. ......+|+
T Consensus 20 ~p~vv~~HG~~~~~~-----------~~~----~~~~~l~~-g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 20 ERVLVLAHGFGTDQS-----------AWN----RILPFFLR-DYRVVL---YDLVCAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp SSEEEEECCTTCCGG-----------GGT----TTGGGGTT-TCEEEE---ECCTTSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred CCEEEEEeCCCCcHH-----------HHH----HHHHHHhC-CcEEEE---EcCCCCCCCCCCCCCccccCcHHHHHHHH
Confidence 589999999642211 121 12334555 999999 666678877441 11 245556666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC-C--CCcccc-----------ch
Q 002194 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-F--GFQNED-----------RT 809 (954)
Q Consensus 744 ~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~--~~~~~~-----------~~ 809 (954)
.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++........ + .+.... ..
T Consensus 81 ~~~~~~~------~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 81 LHILDAL------GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhc------CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHH
Confidence 6666554 34589999999999999999999999999999999864321110 0 000000 00
Q ss_pred hh-----------------h----------------cHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHH
Q 002194 810 LW-----------------E----------------ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFN 856 (954)
Q Consensus 810 ~~-----------------~----------------~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~ 856 (954)
.| . ....+...+....+.++++|+|+++|++|..+| ...+.++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~ 232 (269)
T 4dnp_A 155 AWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVP--ASVATYLKN 232 (269)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBC--HHHHHHHHH
T ss_pred HHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccC--HHHHHHHHH
Confidence 00 0 000111223445667889999999999999998 888888877
Q ss_pred HHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 857 ALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 857 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
.+... ++++++++++|... .++.+.+.+.|.+||++
T Consensus 233 ~~~~~---~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 233 HLGGK---NTVHWLNIEGHLPH-LSAPTLLAQELRRALSH 268 (269)
T ss_dssp HSSSC---EEEEEEEEESSCHH-HHCHHHHHHHHHHHHC-
T ss_pred hCCCC---ceEEEeCCCCCCcc-ccCHHHHHHHHHHHHhh
Confidence 76432 79999999999864 45667788888888765
No 221
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.58 E-value=2.9e-13 Score=144.33 Aligned_cols=275 Identities=11% Similarity=0.050 Sum_probs=184.9
Q ss_pred eecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCcccce
Q 002194 115 SFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFV 194 (954)
Q Consensus 115 ~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~ 194 (954)
-|+.||++|.|.... +. ..|+..+. || ...++|+. ...-
T Consensus 20 ~~~~~g~~iy~~n~~----------------------d~---------~~ly~~~~--dg--~~~~~l~~------~~~~ 58 (302)
T 3s25_A 20 LFCESDGEVFFSNTN----------------------DN---------GRLYAMNI--DG--SNIHKLSN------DTAM 58 (302)
T ss_dssp CEEEETTEEEEEEGG----------------------GT---------TEEEEEET--TS--CSCEEEEE------EEEE
T ss_pred EEEEeCCEEEEEeCC----------------------CC---------ceEEEEcC--CC--CCCEEccC------Ccee
Confidence 478999999998652 10 26777766 65 55677753 1124
Q ss_pred eecCCCCeEEEEEeeccccCC-----CCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 195 TWSQDGKHLAFSIRIDAEDSS-----SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~-----~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
-+++||++|+|+......... .....||+++++|++.++|+... ...|+++|++|+++...
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~---------~~~~s~~g~~Iy~~~~~----- 124 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP---------CIYASLIGNYIYYLHYD----- 124 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC---------EEEEEEETTEEEEEEES-----
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC---------ccEEEEeCCEEEEEeec-----
Confidence 568999999999753210000 12578999999999888886533 23689999999998100
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCC-ceeEcCCCccccccccCCCCcEEEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIGPPAVYTSLDPSPDEKYILI 348 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l~~~~~~~~~~~SpDGk~l~~ 348 (954)
.. +...||+++++| ..++|+.... ..++|||++|+|
T Consensus 125 --------------~~--------------------------~~~~Iy~~~~dGs~~~~lt~~~~---~~~~~~g~~iy~ 161 (302)
T 3s25_A 125 --------------TQ--------------------------TATSLYRIRIDGEEKKKIKNHYL---FTCNTSDRYFYY 161 (302)
T ss_dssp --------------SS--------------------------SCEEEEEEETTSCCCEEEESSCC---CCSEEETTEEEE
T ss_pred --------------CC--------------------------CCceEEEEECCCCCeEEEeCCCc---eEeeEECCEEEE
Confidence 00 345799999955 6677776522 567999999999
Q ss_pred EeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002194 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (954)
Q Consensus 349 ~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (954)
++... .+|++.+++|+..+.|.... ....++|+|+.|+|. +..
T Consensus 162 t~~g~------------~~Iy~~~l~g~~~~~l~~~~----------------~~~~~~P~g~~iy~t-~~~-------- 204 (302)
T 3s25_A 162 NNPKN------------GQLYRYDTASQSEALFYDCN----------------CYKPVVLDDTNVYYM-DVN-------- 204 (302)
T ss_dssp ECTTT------------CCEEEEETTTTEEEEEECSC----------------EEEEEEEETTEEEEE-EGG--------
T ss_pred EeCCC------------ceEEEEECCCCCEEEEeCCC----------------ccceeeecCCEEEEE-EcC--------
Confidence 98522 28999999998877775421 112355999987664 221
Q ss_pred ccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccC
Q 002194 429 VTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYS 508 (954)
Q Consensus 429 ~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~ 508 (954)
....|++.++ +|+..++|+.... +.|+|+|++|+|...... ..|+.+++++. ..+.+.....
T Consensus 205 --~~~~I~~~~l---dG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~--~r~~l~~~~~----- 266 (302)
T 3s25_A 205 --RDNAIVHVNI---NNPNPVVLTEANI----EHYNVYGSLIFYQRGGDN--PALCVVKNDGT--GFKELAKGEF----- 266 (302)
T ss_dssp --GTTEEEEECS---SSCCCEECSCSCE----EEEEEETTEEEEEECSSS--CEEEEEETTSC--CCEEEEESCE-----
T ss_pred --CCcEEEEEEC---CCCCeEEEeCCCc----ceEEECCCEEEEEECCCC--cEEEEEECCCC--ccEEeeCCcc-----
Confidence 1247999986 7888888865432 569999999998865543 68999999985 4455554321
Q ss_pred CCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEe
Q 002194 509 DPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (954)
Q Consensus 509 ~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 568 (954)
...++.+.+|+|.... ...|+++.+++...++|.
T Consensus 267 ------~~i~i~~d~Iy~td~~--------------------~~~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 267 ------CNINVTSQYVYFTDFV--------------------SNKEYCTSTQNPDTIKAL 300 (302)
T ss_dssp ------EEEEECSSEEEEEETT--------------------TCCEEEEESSSCCSCEEC
T ss_pred ------ceEEEeCCEEEEEECC--------------------CCeEEEEECCCCCceEec
Confidence 3467788888887621 113778887765555543
No 222
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.58 E-value=1e-14 Score=156.43 Aligned_cols=197 Identities=16% Similarity=0.147 Sum_probs=132.5
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch-hhHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND-RFVEQLVACAEAAVE 748 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~av~ 748 (954)
.|+||++||.+.... .| .......++++||.|++ .+.+|+|.+.... .......+|+.++++
T Consensus 43 ~~~vv~lHG~~~~~~-----------~~---~~~~~~~l~~~g~~vi~---~D~~G~G~s~~~~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 43 GDPVVFIAGRGGAGR-----------TW---HPHQVPAFLAAGYRCIT---FDNRGIGATENAEGFTTQTMVADTAALIE 105 (293)
T ss_dssp SEEEEEECCTTCCGG-----------GG---TTTTHHHHHHTTEEEEE---ECCTTSGGGTTCCSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchh-----------hc---chhhhhhHhhcCCeEEE---EccCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 578999999642211 11 11235677899999999 5556777765433 234566777777777
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCC--------------CCcccc-------
Q 002194 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF--------------GFQNED------- 807 (954)
Q Consensus 749 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~--------------~~~~~~------- 807 (954)
.+ +.+++.++|||+||.+++.++.++|++++++|+++|......... ......
T Consensus 106 ~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (293)
T 3hss_A 106 TL------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL 179 (293)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hc------CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHh
Confidence 66 335899999999999999999999999999999998643211000 000000
Q ss_pred ----chhhhcH---H----HH------------------HhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002194 808 ----RTLWEAT---S----TY------------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNAL 858 (954)
Q Consensus 808 ----~~~~~~~---~----~~------------------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l 858 (954)
....... . .+ ...+....+.++++|+|+++|++|..+| .+.++++.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~ 257 (293)
T 3hss_A 180 ENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTP--PYLGREVADAL 257 (293)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCC--HHHHHHHHHHC
Confidence 0000000 0 00 0112233457789999999999999998 88888887766
Q ss_pred HhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 859 KGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 859 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
. ++++++++++||... .++...+.+.|.+||++
T Consensus 258 ~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 P----NGRYLQIPDAGHLGF-FERPEAVNTAMLKFFAS 290 (293)
T ss_dssp T----TEEEEEETTCCTTHH-HHSHHHHHHHHHHHHHT
T ss_pred C----CceEEEeCCCcchHh-hhCHHHHHHHHHHHHHh
Confidence 3 369999999999863 45667788888888875
No 223
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.58 E-value=2.2e-13 Score=152.26 Aligned_cols=278 Identities=11% Similarity=0.083 Sum_probs=169.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+..+.+ ..|.+|++.+ + .....+.. +..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D---------------------------------~~v~iWd~~~-~--~~~~~~~~--h~~ 109 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQD---------------------------------GRLIVWNALT-S--QKTHAIKL--HCP 109 (380)
T ss_dssp CEEEEEECTTSSCEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CCT
T ss_pred EEEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--ccceEEec--CCC
Confidence 56788999999999998876 5899999854 2 22333433 224
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce--------eecccCCCccccccccceeEecCCe-EEEE
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFVWVNNST-LLVC 260 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~--------~~lt~~~~~~~~~~~~~~~wspDG~-~l~~ 260 (954)
.+...+|+|||+.|+... .++...|| ++.+... +.++.+. +.+..+.|+|++. .|+.
T Consensus 110 ~v~~~~~s~~g~~las~~-------~d~~v~iw--~~~~~~~~~~~~~~~~~~~gh~-----~~v~~~~~~~~~~~~l~s 175 (380)
T 3iz6_a 110 WVMECAFAPNGQSVACGG-------LDSACSIF--NLSSQADRDGNMPVSRVLTGHK-----GYASSCQYVPDQETRLIT 175 (380)
T ss_dssp TCCCCEECTTSSEEEECC-------SSSCCEEE--ECCCCSSCCCSSTTCCBCCCCS-----SCCCCCBCCSSSSSCEEE
T ss_pred CEEEEEECCCCCEEEEee-------CCCcEEEE--ECCCCccccCCccceeeccCCC-----cceEEEEEecCCCCEEEE
Confidence 688899999999988743 33344444 5443211 1121111 1266788998754 4554
Q ss_pred EecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcC------CC-c
Q 002194 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG------PP-A 332 (954)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~------~~-~ 332 (954)
.. ....|.++|+ +|+..... .. .
T Consensus 176 ~s-------------------------------------------------~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 176 GS-------------------------------------------------GDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp EC-------------------------------------------------TTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred EC-------------------------------------------------CCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 41 1234666777 66433221 11 4
Q ss_pred cccccccCC-CCcEEEEEeecCCcccccccCCCCcceEEEecc-Cc-eEEEeccCCCcccCCccccccccCccceeeccC
Q 002194 333 VYTSLDPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (954)
Q Consensus 333 ~~~~~~~Sp-DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~-g~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspD 409 (954)
.+..+.|+| |++.|+..+.+ +.+.+||+. ++ ..+.+.. +...+..++|+||
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D-------------~~v~~wd~~~~~~~~~~~~~-------------h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCD-------------TTVRLWDLRITSRAVRTYHG-------------HEGDINSVKFFPD 260 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETT-------------SCEEEEETTTTCCCCEEECC-------------CSSCCCEEEECTT
T ss_pred CeEEEEeecCCCCEEEEEECC-------------CeEEEEECCCCCcceEEECC-------------cCCCeEEEEEecC
Confidence 566778866 88888877633 389999987 32 2233332 2245678999999
Q ss_pred CCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEeecc-------cccCceeeccCCceEEEEEeccccce
Q 002194 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLD-------LRYGGISWCDDSLALVYESWYKTRRT 481 (954)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~-------~~~~~~~~spDg~~l~~~~~~~~~~~ 481 (954)
|+.++.. +..+.|.+|++ ..++. ..+.... ..+..++|+|+|+.|+....++
T Consensus 261 ~~~l~s~-------------s~D~~i~lwd~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg---- 320 (380)
T 3iz6_a 261 GQRFGTG-------------SDDGTCRLFDM---RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG---- 320 (380)
T ss_dssp SSEEEEE-------------CSSSCEEEEET---TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS----
T ss_pred CCeEEEE-------------cCCCeEEEEEC---CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC----
Confidence 9876554 44568899996 33332 2222211 1256789999999988775433
Q ss_pred EEEEEcCCCCCCCcEEEe----cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEE
Q 002194 482 RTWVISPGSKDVAPRILF----DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (954)
Q Consensus 482 ~l~~~d~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 557 (954)
.|+++|...+ +..... ..+...+.. +.|+|||++|+.... ...|.+|
T Consensus 321 ~i~vwd~~~~--~~~~~~~~~~~~h~~~v~~------l~~s~dg~~l~sgs~---------------------D~~i~iW 371 (380)
T 3iz6_a 321 DCYVWDTLLA--EMVLNLGTLQNSHEGRISC------LGLSSDGSALCTGSW---------------------DKNLKIW 371 (380)
T ss_dssp CEEEEETTTC--CEEEEECCSCSSCCCCCCE------EEECSSSSEEEEECT---------------------TSCEEEE
T ss_pred CEEEEECCCC--ceEEEEecccCCCCCceEE------EEECCCCCEEEEeeC---------------------CCCEEEE
Confidence 3556666554 222111 122222222 789999999887652 2248999
Q ss_pred ECCCCC
Q 002194 558 DINTGS 563 (954)
Q Consensus 558 d~~~g~ 563 (954)
++.+++
T Consensus 372 ~~~~~~ 377 (380)
T 3iz6_a 372 AFSGHR 377 (380)
T ss_dssp ECCSSS
T ss_pred ecCCCc
Confidence 987654
No 224
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.57 E-value=1.8e-14 Score=152.03 Aligned_cols=198 Identities=10% Similarity=0.005 Sum_probs=130.1
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (954)
.|+||++||.+... ..| ......|+++||.|++ .+..|+|.+.... .......+|+.+.
T Consensus 12 ~~~vvllHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (267)
T 3sty_A 12 KKHFVLVHAAFHGA-----------WCW----YKIVALMRSSGHNVTA---LDLGASGINPKQALQIPNFSDYLSPLMEF 73 (267)
T ss_dssp CCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCc-----------chH----HHHHHHHHhcCCeEEE---eccccCCCCCCcCCccCCHHHHHHHHHHH
Confidence 68999999964211 111 2456678889999999 6667888876542 2345556666655
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC--------------CC---Cc--cc-
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--------------FG---FQ--NE- 806 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--------------~~---~~--~~- 806 (954)
++.+ + +.+++.|+|||+||.+++.++.++|++++++|++++........ +. +. ..
T Consensus 74 l~~l---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (267)
T 3sty_A 74 MASL---P--ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGP 148 (267)
T ss_dssp HHTS---C--TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCT
T ss_pred HHhc---C--CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhh
Confidence 5543 1 34689999999999999999999999999999988754211100 00 00 00
Q ss_pred ---cchhh-----------h--cH------------------HHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHH
Q 002194 807 ---DRTLW-----------E--AT------------------STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSD 852 (954)
Q Consensus 807 ---~~~~~-----------~--~~------------------~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~ 852 (954)
....+ . .. ..+............++|+|+++|++|..+| ++..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~ 226 (267)
T 3sty_A 149 TNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALK--KEFLK 226 (267)
T ss_dssp TSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHH--HHHHH
T ss_pred hcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccC--HHHHH
Confidence 00000 0 00 0011111222222235899999999999988 88888
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 853 RFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 853 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
++.+.+.. ++++++|++||... .++.+.+.+.|.+|++++
T Consensus 227 ~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 227 LMIEKNPP----DEVKEIEGSDHVTM-MSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHSCC----SEEEECTTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHhCCC----ceEEEeCCCCcccc-ccChHHHHHHHHHHHHhc
Confidence 87776632 58999999999863 566788889999999874
No 225
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.57 E-value=2.1e-13 Score=155.97 Aligned_cols=126 Identities=8% Similarity=0.045 Sum_probs=76.3
Q ss_pred ccccccccCCCC-cEEEEEeecCCcccccccCCCCcceEEEeccCceE-----EEeccCCCcccCCccccccccCcccee
Q 002194 332 AVYTSLDPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-----RELCDLPLAEDIPIAFNSVRKGMRSIN 405 (954)
Q Consensus 332 ~~~~~~~~SpDG-k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-----~~l~~~~~~~~~p~~~~~~~~g~~~~~ 405 (954)
..+..++|+||| +.|+..+.+ +.|.+||+..+.. +.+..+...... ..+......+..++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~ 292 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSK-------------GTIRLCDMRASALCDRHSKLFEEPEDPSNR-SFFSEIISSISDVK 292 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETT-------------SCEEEEETTTCSSSCTTCEEECCC-----C-CHHHHHTTCEEEEE
T ss_pred cceEEEEECCCCCcEEEEEeCC-------------CeEEEEECcCCccccceeeEeccCCCcccc-ccccccCceEEEEE
Confidence 667889999999 788877743 3899999986542 333332110000 00111122567899
Q ss_pred eccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCC-CCCceEEeecccc---------------cCceeeccCCce
Q 002194 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLR---------------YGGISWCDDSLA 469 (954)
Q Consensus 406 wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~~~l~~~~~~---------------~~~~~~spDg~~ 469 (954)
|+|||+.++.. +. +.|.+|++ .. +.....+..+... ...++|+|||+.
T Consensus 293 ~s~~g~~l~~~-------------~~-~~v~iwd~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~ 356 (447)
T 3dw8_B 293 FSHSGRYMMTR-------------DY-LSVKVWDL--NMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV 356 (447)
T ss_dssp ECTTSSEEEEE-------------ES-SEEEEEET--TCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE
T ss_pred ECCCCCEEEEe-------------eC-CeEEEEeC--CCCccccceeeccccccccccccccccccccceEEEECCCCCE
Confidence 99999976654 33 68999996 22 3333444433321 123899999999
Q ss_pred EEEEEeccccceEEEEEcCCCC
Q 002194 470 LVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
|+..+.++ .|+++|+.++
T Consensus 357 l~s~s~dg----~v~iwd~~~~ 374 (447)
T 3dw8_B 357 VMTGSYNN----FFRMFDRNTK 374 (447)
T ss_dssp EEEECSTT----EEEEEETTTC
T ss_pred EEEeccCC----EEEEEEcCCC
Confidence 97665432 4666676664
No 226
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.57 E-value=3.9e-14 Score=155.09 Aligned_cols=216 Identities=14% Similarity=0.130 Sum_probs=137.1
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIG 725 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G 725 (954)
.+|.++++..+-|++- ..+.+.||++||++.... .|. .....|+. .||.|++ .|.+|
T Consensus 35 ~~g~~l~y~~~G~~~~----~~~g~plvllHG~~~~~~-----------~w~----~~~~~l~~~~~~~Via---~D~rG 92 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA----QPHALPLIVLHGGPGMAH-----------NYV----ANIAALADETGRTVIH---YDQVG 92 (330)
T ss_dssp ETTEEEEEEEECCSSC----CTTCCCEEEECCTTTCCS-----------GGG----GGGGGHHHHHTCCEEE---ECCTT
T ss_pred ecCcEEEEEEecCccC----CCCCCcEEEECCCCCCch-----------hHH----HHHHHhccccCcEEEE---ECCCC
Confidence 4788998888866321 101124777899753211 111 12234554 6999999 67778
Q ss_pred CCCccc--ch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC-
Q 002194 726 EGDEEA--ND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL- 798 (954)
Q Consensus 726 ~G~~~~--~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~- 798 (954)
+|.+.. .. .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|++++......
T Consensus 93 ~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~ 166 (330)
T 3nwo_A 93 CGNSTHLPDAPADFWTPQLFVDEFHAVCTAL------GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLW 166 (330)
T ss_dssp STTSCCCTTSCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHH
T ss_pred CCCCCCCCCCccccccHHHHHHHHHHHHHHc------CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHH
Confidence 888754 11 12455677777777765 235899999999999999999999999999998876432100
Q ss_pred ----------CCC-------------CCcc-cc--------------chhhh------------cHHHHH----------
Q 002194 799 ----------TPF-------------GFQN-ED--------------RTLWE------------ATSTYV---------- 818 (954)
Q Consensus 799 ----------~~~-------------~~~~-~~--------------~~~~~------------~~~~~~---------- 818 (954)
.+. .+.. .. ...+. .+..|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 3nwo_A 167 SEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHV 246 (330)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhh
Confidence 000 0000 00 00000 000011
Q ss_pred -----hcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHH
Q 002194 819 -----EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRW 893 (954)
Q Consensus 819 -----~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 893 (954)
.++....+.++++|+||++|++|..+| ..+.++.+.+ .+.+++++|++||... .+..+.+.+.|.+|
T Consensus 247 ~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p---~~~~~~~~~i----p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~F 318 (330)
T 3nwo_A 247 VGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP---KTWQPFVDHI----PDVRSHVFPGTSHCTH-LEKPEEFRAVVAQF 318 (330)
T ss_dssp CSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH---HHHHHHHHHC----SSEEEEEETTCCTTHH-HHSHHHHHHHHHHH
T ss_pred hccccCCchhhhcccCCCCeEEEeeCCCccCh---HHHHHHHHhC----CCCcEEEeCCCCCchh-hcCHHHHHHHHHHH
Confidence 112223456789999999999998765 4566665544 2479999999999864 56778889999999
Q ss_pred HHHhc
Q 002194 894 LQKYC 898 (954)
Q Consensus 894 l~~~l 898 (954)
|.++.
T Consensus 319 L~~~~ 323 (330)
T 3nwo_A 319 LHQHD 323 (330)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98864
No 227
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.57 E-value=1.3e-12 Score=148.04 Aligned_cols=257 Identities=9% Similarity=0.032 Sum_probs=146.1
Q ss_pred ceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCcccc
Q 002194 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (954)
Q Consensus 114 ~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~ 193 (954)
..|+|||++|+....+ +.|.+|++.. +....+. ..+...+..
T Consensus 103 ~~~~~~~~~l~~~~~d---------------------------------g~i~iwd~~~----~~~~~~~-~~h~~~v~~ 144 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTE---------------------------------GDIKVLDSNF----NLQREID-QAHVSEITK 144 (420)
T ss_dssp EEECSSSCEEEEEETT---------------------------------SCEEEECTTS----CEEEEET-TSSSSCEEE
T ss_pred EEEecCCCEEEEEECC---------------------------------CCEEEEeCCC----cceeeec-ccccCccEE
Confidence 4689999999998775 5789999853 3333331 113347899
Q ss_pred eeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCC
Q 002194 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (954)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~ 273 (954)
+.|+|||+.|+... ....|.++|+++++........... +..++|+|||+.|+....+..-.
T Consensus 145 ~~~~~~~~~l~s~s---------~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~d~~v~----- 206 (420)
T 3vl1_A 145 LKFFPSGEALISSS---------QDMQLKIWSVKDGSNPRTLIGHRAT----VTDIAIIDRGRNVLSASLDGTIR----- 206 (420)
T ss_dssp EEECTTSSEEEEEE---------TTSEEEEEETTTCCCCEEEECCSSC----EEEEEEETTTTEEEEEETTSCEE-----
T ss_pred EEECCCCCEEEEEe---------CCCeEEEEeCCCCcCceEEcCCCCc----EEEEEEcCCCCEEEEEcCCCcEE-----
Confidence 99999999888755 2557888898876654333322222 67899999999998762211100
Q ss_pred CCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe--CCceeEcC-CCccccccccCCCCcEEEEEe
Q 002194 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIG-PPAVYTSLDPSPDEKYILISS 350 (954)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~--~G~~~~l~-~~~~~~~~~~SpDGk~l~~~s 350 (954)
.| ........ +. +..+.+ ....+..+.. .+...... ....+..++|||||++|+..+
T Consensus 207 ------iw-d~~~~~~~--~~----~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (420)
T 3vl1_A 207 ------LW-ECGTGTTI--HT----FNRKEN-------PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH 266 (420)
T ss_dssp ------EE-ETTTTEEE--EE----ECBTTB-------TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE
T ss_pred ------Ee-ECCCCcee--EE----eecCCC-------CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc
Confidence 00 00000000 00 000000 0011112211 11111111 125567899999999998877
Q ss_pred ecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccc
Q 002194 351 IHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEV 429 (954)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~ 429 (954)
.+ +.+.+||+..++ ...+... ....+..++|+|||+.+++..
T Consensus 267 ~d-------------g~i~i~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~l~~g------------ 309 (420)
T 3vl1_A 267 VS-------------GVITVHNVFSKEQTIQLPSK------------FTCSCNSLTVDGNNANYIYAG------------ 309 (420)
T ss_dssp TT-------------SCEEEEETTTCCEEEEECCT------------TSSCEEEEEECSSCTTEEEEE------------
T ss_pred CC-------------CeEEEEECCCCceeEEcccc------------cCCCceeEEEeCCCCCEEEEE------------
Confidence 43 379999998654 3333221 113456899999999544431
Q ss_pred cCCCeEEEEecCCCCCCC-ceEEee-cccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 430 TPRDIIYTQQAEPVQGEG-PEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 430 ~~~~~l~~~~~~~~~g~~-~~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
+..+.|.+|++ .++.. ...+.. ....+..+ ++++|+.|+..+.++ ..+||.+..
T Consensus 310 ~~dg~i~vwd~--~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~--~v~iw~~~~ 365 (420)
T 3vl1_A 310 YENGMLAQWDL--RSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDT--SIKLDIISD 365 (420)
T ss_dssp ETTSEEEEEET--TCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTE--EEEEEEECC
T ss_pred eCCCeEEEEEc--CCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCc--cEEEEeccC
Confidence 33568999996 33333 345544 34444555 567888777664433 266776654
No 228
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.56 E-value=5.7e-14 Score=152.48 Aligned_cols=207 Identities=14% Similarity=0.098 Sum_probs=135.1
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|..+.....-| .|+||++||++... ..| ...+..|++ ||.|++ .+.+|+
T Consensus 55 ~~~~~~~~~~~g~----------~p~vv~lhG~~~~~-----------~~~----~~~~~~L~~-~~~v~~---~D~~G~ 105 (314)
T 3kxp_A 55 IGRITLNVREKGS----------GPLMLFFHGITSNS-----------AVF----EPLMIRLSD-RFTTIA---VDQRGH 105 (314)
T ss_dssp CSSCEEEEEEECC----------SSEEEEECCTTCCG-----------GGG----HHHHHTTTT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEecCC----------CCEEEEECCCCCCH-----------HHH----HHHHHHHHc-CCeEEE---EeCCCc
Confidence 4777777665422 47899999964211 111 123444444 799999 555677
Q ss_pred CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC-----
Q 002194 727 GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT----- 799 (954)
Q Consensus 727 G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~----- 799 (954)
|.+... ........+|+.++++++ +.++++++|||+||.+++.++.++|++++++|++++.......
T Consensus 106 G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 106 GLSDKPETGYEANDYADDIAGLIRTL------ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp TTSCCCSSCCSHHHHHHHHHHHHHHH------TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 776432 223456667777776665 2368999999999999999999999999999999875431100
Q ss_pred -------CCCCcccc--chhh---------hcHHHHH---------------------------hcCcccccCCCCCCEE
Q 002194 800 -------PFGFQNED--RTLW---------EATSTYV---------------------------EMSPFMSANKLKKPIL 834 (954)
Q Consensus 800 -------~~~~~~~~--~~~~---------~~~~~~~---------------------------~~sp~~~~~~~~~P~L 834 (954)
...+.... ...+ .....+. ..+....+.++++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 259 (314)
T 3kxp_A 180 EARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVL 259 (314)
T ss_dssp HHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEE
T ss_pred HHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEE
Confidence 00000000 0000 0000000 0033344567899999
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 835 LVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 835 ii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+++|++|..+| .+.+.++.+.+.. ++++++|++||.+. .++...+.+.|.+||+
T Consensus 260 ii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~~g~gH~~~-~e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 260 IVRGESSKLVS--AAALAKTSRLRPD----LPVVVVPGADHYVN-EVSPEITLKAITNFID 313 (314)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHCTT----SCEEEETTCCSCHH-HHCHHHHHHHHHHHHH
T ss_pred EEecCCCccCC--HHHHHHHHHhCCC----ceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 99999999998 8888888877643 48889999999873 5556778888888886
No 229
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.56 E-value=8e-14 Score=147.42 Aligned_cols=211 Identities=18% Similarity=0.152 Sum_probs=138.7
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++...+-|++ .+.|.||++||..... ..|. ..+..|+ .+|.|++ .|.+|+
T Consensus 9 ~~g~~l~y~~~g~~~------~~~~~vvllHG~~~~~-----------~~~~----~~~~~L~-~~~~vi~---~D~~G~ 63 (266)
T 2xua_A 9 VNGTELHYRIDGERH------GNAPWIVLSNSLGTDL-----------SMWA----PQVAALS-KHFRVLR---YDTRGH 63 (266)
T ss_dssp CSSSEEEEEEESCSS------SCCCEEEEECCTTCCG-----------GGGG----GGHHHHH-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcCCcc------CCCCeEEEecCccCCH-----------HHHH----HHHHHHh-cCeEEEE---ecCCCC
Confidence 478889887774421 0147899999953211 1121 2344454 5699999 677788
Q ss_pred CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC-CC-
Q 002194 727 GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FG- 802 (954)
Q Consensus 727 G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~~- 802 (954)
|.+... ........+|+.+.++.+ ..+++.++||||||.+++.+|.++|++++++|++++........ +.
T Consensus 64 G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 137 (266)
T 2xua_A 64 GHSEAPKGPYTIEQLTGDVLGLMDTL------KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVP 137 (266)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHH
Confidence 887643 223556677777777665 23589999999999999999999999999999998754321000 00
Q ss_pred ---------Ccc---ccchhh-------hc---------------HH-------HHHhcCcccccCCCCCCEEEEEeCCC
Q 002194 803 ---------FQN---EDRTLW-------EA---------------TS-------TYVEMSPFMSANKLKKPILLVHGEED 841 (954)
Q Consensus 803 ---------~~~---~~~~~~-------~~---------------~~-------~~~~~sp~~~~~~~~~P~Lii~G~~D 841 (954)
... .....| .. .. .+...+....+.++++|+|+++|++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 217 (266)
T 2xua_A 138 RAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHD 217 (266)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTC
T ss_pred HHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCC
Confidence 000 000000 00 00 01122333456778999999999999
Q ss_pred CCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 842 NNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 842 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
..+| ++.++++.+.+.. .++++++ +||... .+..+.+.+.+.+||.+
T Consensus 218 ~~~~--~~~~~~~~~~~~~----~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 218 LAAT--PAQGRELAQAIAG----ARYVELD-ASHISN-IERADAFTKTVVDFLTE 264 (266)
T ss_dssp SSSC--HHHHHHHHHHSTT----CEEEEES-CCSSHH-HHTHHHHHHHHHHHHTC
T ss_pred CcCC--HHHHHHHHHhCCC----CEEEEec-CCCCch-hcCHHHHHHHHHHHHHh
Confidence 9998 8888888776643 4889999 999864 45567788888888853
No 230
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.56 E-value=9.6e-15 Score=155.98 Aligned_cols=191 Identities=14% Similarity=0.043 Sum_probs=127.4
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHHhCCCccc-EEEEeccCCCCCCCC---CCCccc---cchhhhcHHHHHhcCccccc
Q 002194 754 GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC-CGIARSGAYNRTLTP---FGFQNE---DRTLWEATSTYVEMSPFMSA 826 (954)
Q Consensus 754 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~-a~v~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~sp~~~~ 826 (954)
..+|++||+|+|+|+||+||+.+++.+|+.|+ +++++++........ ..+... ....++........+++..+
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChh
Confidence 45899999999999999999999999999999 887777632111100 000000 00011111111111455555
Q ss_pred CCCC-CCEEEEEeCCCCCCCCchHHHHHHHHHHHhCC--CcEEEEEeCCCCCcCCCccc------------------HHH
Q 002194 827 NKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHG--ALCRLVILPFESHGYAARES------------------IMH 885 (954)
Q Consensus 827 ~~~~-~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~~~~------------------~~~ 885 (954)
.+++ .|+||+||++|.+|| +.++++++++|+..+ .+++++.+++++|.+..... ..+
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP--~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d 163 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred HcCCCCcEEEEeCCCCCCcC--HHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCCh
Confidence 5554 599999999999999 999999999999887 37999999999998742221 245
Q ss_pred HHHHHHHHHHHhcccCCC-CCCc---ccccC-cccccCCCCCCCCcEEEecCCCCc-Cc-ceeeeeeccCc
Q 002194 886 VLWETDRWLQKYCVSNTA-DRST---DLKVS-KDDESKGAPHLQNKTVAASGGGGT-EA-DFEHDGCHLAP 949 (954)
Q Consensus 886 ~~~~i~~fl~~~l~~~~~-~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~ 949 (954)
....|++||...+.+... .... .++|. .+ ..........++++.+|.. .. |..|+++|--.
T Consensus 164 ~~~~i~~ff~g~~~~~~~~~~~~~~~~~~q~~~f---~~~~~~~~~~~yvP~~~~~~~~~~~l~v~lHGc~ 231 (318)
T 2d81_A 164 GAGAALKWIYGSLNARNTGTLSGSVLSFAQSGSY---GANGMDTTGYLYVPQSCASGATVCSLHVALHGCL 231 (318)
T ss_dssp HHHHHHHHHHSSCCCCCCSSCSSEEEEEECCGGG---CCTTBCSEEEEEECHHHHSSSSCEEEEEEECCTT
T ss_pred HHHHHHHHHhccCCCCccccccccccccccccCc---CCCCCCcceEEEecCCCCCCCCCCCEEEEecCCC
Confidence 677899999887654322 1211 13443 22 1223555667889988864 44 89999999654
No 231
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.56 E-value=4e-14 Score=150.85 Aligned_cols=209 Identities=16% Similarity=0.123 Sum_probs=134.2
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (954)
..+|.+++...+ + + -|.||++||.+... ..| ...+..|+++||.|++ .+.+|
T Consensus 9 ~~~g~~l~y~~~---g-----~--~~pvvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~~G 60 (279)
T 1hkh_A 9 NSTPIELYYEDQ---G-----S--GQPVVLIHGYPLDG-----------HSW----ERQTRELLAQGYRVIT---YDRRG 60 (279)
T ss_dssp TTEEEEEEEEEE---S-----S--SEEEEEECCTTCCG-----------GGG----HHHHHHHHHTTEEEEE---ECCTT
T ss_pred CCCCeEEEEEec---C-----C--CCcEEEEcCCCchh-----------hHH----hhhHHHHHhCCcEEEE---eCCCC
Confidence 346677765443 1 1 23488899964211 111 2355678889999999 66678
Q ss_pred CCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-cccEEEEeccCCCCCCC---
Q 002194 726 EGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLT--- 799 (954)
Q Consensus 726 ~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~~~~~~--- 799 (954)
+|.+.... .......+|+.++++.+ +.+++.++||||||.+++.++.++|+ +++++|++++.......
T Consensus 61 ~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~ 134 (279)
T 1hkh_A 61 FGGSSKVNTGYDYDTFAADLHTVLETL------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDD 134 (279)
T ss_dssp STTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcC
Confidence 88875432 23456678888887776 33589999999999999999999998 99999999874321100
Q ss_pred -CCCCcccc-----------c-hh--------hh---------cH---HHHH------------------hcCcccccCC
Q 002194 800 -PFGFQNED-----------R-TL--------WE---------AT---STYV------------------EMSPFMSANK 828 (954)
Q Consensus 800 -~~~~~~~~-----------~-~~--------~~---------~~---~~~~------------------~~sp~~~~~~ 828 (954)
........ . .. +. .. +.+. ..+....+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (279)
T 1hkh_A 135 NPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEA 214 (279)
T ss_dssp BTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHH
T ss_pred CcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHH
Confidence 00000000 0 00 00 00 0000 0111123455
Q ss_pred C---CCCEEEEEeCCCCCCCCchHHH-HHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 829 L---KKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 829 ~---~~P~Lii~G~~D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+ ++|+|++||++|..+| ++.+ +.+.+.+. +++++++++++|... .++.+.+.+.|.+||.
T Consensus 215 i~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 215 VRAAGKPTLILHGTKDNILP--IDATARRFHQAVP----EADYVEVEGAPHGLL-WTHADEVNAALKTFLA 278 (279)
T ss_dssp HHHHCCCEEEEEETTCSSSC--TTTTHHHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred hccCCCCEEEEEcCCCccCC--hHHHHHHHHHhCC----CeeEEEeCCCCccch-hcCHHHHHHHHHHHhh
Confidence 6 8999999999999998 7776 66666553 358899999999874 4567788888888885
No 232
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.56 E-value=6.8e-13 Score=150.53 Aligned_cols=266 Identities=15% Similarity=0.116 Sum_probs=166.3
Q ss_pred eceEEEEccCCCCCCceeeeecC-CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGF-PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~-~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 241 (954)
..|+||++.+ ++..++..+ .+...+..++|||||++|+... ....|.++|+++++...........
T Consensus 125 ~tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs---------~Dg~v~iWd~~~~~~~~~~~~h~~~ 191 (420)
T 4gga_A 125 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---------SSAEVQLWDVQQQKRLRNMTSHSAR 191 (420)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEE---------CCCeEEEEEcCCCcEEEEEeCCCCc
Confidence 4899999864 444433222 2334689999999999998854 2456777788887765443333322
Q ss_pred ccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe
Q 002194 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (954)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~ 321 (954)
+ ..++.|++.|+... ....++.++.
T Consensus 192 ----v--~~~s~~~~~l~sgs-------------------------------------------------~d~~i~~~d~ 216 (420)
T 4gga_A 192 ----V--GSLSWNSYILSSGS-------------------------------------------------RSGHIHHHDV 216 (420)
T ss_dssp ----E--EEEEEETTEEEEEE-------------------------------------------------TTSEEEEEET
T ss_pred ----e--EEEeeCCCEEEEEe-------------------------------------------------CCCceeEeee
Confidence 3 34455677777551 1123555565
Q ss_pred -CC--ceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEE--EeccCCCcccCCcccc
Q 002194 322 -DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR--ELCDLPLAEDIPIAFN 395 (954)
Q Consensus 322 -~G--~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~--~l~~~~~~~~~p~~~~ 395 (954)
.. ....+... ..+....|+|+|+.++....++ .+.+|+...++.. .+.. ..
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~-------------~v~i~~~~~~~~~~~~~~~----------~~ 273 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-------------LVNVWPSAPGEGGWVPLQT----------FT 273 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEESSCCSSCSCCSEE----------EC
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeeccc-------------cceEEeeccccccceeeee----------ec
Confidence 22 23333333 6677889999999999887443 7889998754311 1110 01
Q ss_pred ccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEe
Q 002194 396 SVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESW 475 (954)
Q Consensus 396 ~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~ 475 (954)
.....+..++|+|++..+++.... +..+.|.+|++ ..++..........+..+.|+|+++.|+.+..
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~g----------s~D~~I~iwd~---~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEEC----------TTTCEEEEEET---TTTEEEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred ccCCceeeeeeCCCcccEEEEEee----------cCCCEEEEEeC---CccccceeeccccceeeeeecCCCCeEEEEEe
Confidence 122345678999999988765211 23457899996 44444333444556678899999999998865
Q ss_pred ccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEE
Q 002194 476 YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (954)
Q Consensus 476 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 555 (954)
... ..|.++|..++ ++......+...+.. ++|||||++|+.... ...|+
T Consensus 341 ~~d--~~I~iwd~~~~--~~v~~l~gH~~~V~~------l~~spdg~~l~S~s~---------------------D~tvr 389 (420)
T 4gga_A 341 FAQ--NQLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAAA---------------------DETLR 389 (420)
T ss_dssp TTT--CCEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEET---------------------TTEEE
T ss_pred cCC--CEEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEec---------------------CCeEE
Confidence 333 23666666664 344444455555544 889999999887662 23489
Q ss_pred EEECCCCC
Q 002194 556 LFDINTGS 563 (954)
Q Consensus 556 ~~d~~~g~ 563 (954)
+||+.+..
T Consensus 390 iWdv~~~~ 397 (420)
T 4gga_A 390 LWRCFELD 397 (420)
T ss_dssp EECCSCSS
T ss_pred EEECCCCC
Confidence 99986543
No 233
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.56 E-value=1e-14 Score=154.19 Aligned_cols=211 Identities=12% Similarity=0.123 Sum_probs=136.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCC
Q 002194 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGE 726 (954)
Q Consensus 648 ~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~ 726 (954)
+|.+++....- +.|.||++||.+.... .| ......|+. +||.|++ .+.+|+
T Consensus 9 ~g~~l~y~~~g----------~~~~vv~lhG~~~~~~-----------~~----~~~~~~l~~~~g~~v~~---~d~~G~ 60 (272)
T 3fsg_A 9 TRSNISYFSIG----------SGTPIIFLHGLSLDKQ-----------ST----CLFFEPLSNVGQYQRIY---LDLPGM 60 (272)
T ss_dssp CTTCCEEEEEC----------CSSEEEEECCTTCCHH-----------HH----HHHHTTSTTSTTSEEEE---ECCTTS
T ss_pred cCCeEEEEEcC----------CCCeEEEEeCCCCcHH-----------HH----HHHHHHHhccCceEEEE---ecCCCC
Confidence 66666654431 1467999999632110 01 112223444 6999999 666778
Q ss_pred CCcccch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCC----
Q 002194 727 GDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF---- 801 (954)
Q Consensus 727 G~~~~~~-~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~---- 801 (954)
|.+.... .......+|+.++++.+. +.+++.++|||+||.+++.++.++|++++++|+++|.........
T Consensus 61 G~s~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 135 (272)
T 3fsg_A 61 GNSDPISPSTSDNVLETLIEAIEEII-----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGK 135 (272)
T ss_dssp TTCCCCSSCSHHHHHHHHHHHHHHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCcccccccc
Confidence 8775543 345666777777777642 336899999999999999999999999999999998753211000
Q ss_pred -------CCcc----cc------------chhhhcH-------------HHHHh--------cCcccccCCCCCCEEEEE
Q 002194 802 -------GFQN----ED------------RTLWEAT-------------STYVE--------MSPFMSANKLKKPILLVH 837 (954)
Q Consensus 802 -------~~~~----~~------------~~~~~~~-------------~~~~~--------~sp~~~~~~~~~P~Lii~ 837 (954)
.+.. .. ...+... ..+.. ..+...+.++++|+|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 215 (272)
T 3fsg_A 136 HINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMV 215 (272)
T ss_dssp CCCEECSCCCCCTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEE
T ss_pred chhhhhhhhhcccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEE
Confidence 0000 00 0000000 00000 001113467899999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
|++|..+| ++.+.++.+.+ .++++++++++||... .+....+.+.+.+||++..
T Consensus 216 g~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 216 GRNDQVVG--YQEQLKLINHN----ENGEIVLLNRTGHNLM-IDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp ETTCTTTC--SHHHHHHHTTC----TTEEEEEESSCCSSHH-HHTHHHHHHHHHHHHHHHH
T ss_pred eCCCCcCC--HHHHHHHHHhc----CCCeEEEecCCCCCch-hcCHHHHHHHHHHHHHHhh
Confidence 99999998 88887776654 3479999999999874 4567788889999998764
No 234
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.55 E-value=2.1e-14 Score=152.36 Aligned_cols=220 Identities=10% Similarity=0.055 Sum_probs=134.4
Q ss_pred eEEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEc
Q 002194 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (954)
Q Consensus 639 ~~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (954)
.+...++..+| .+..+...+ +.|+||++||.+... ..| ......++++||.|++
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~---------~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~- 56 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG---------EGAPLLMIHGNSSSG-----------AIF----APQLEGEIGKKWRVIA- 56 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC---------CEEEEEEECCTTCCG-----------GGG----HHHHHSHHHHHEEEEE-
T ss_pred eEEEEEEcCCc-eEEEEecCC---------CCCeEEEECCCCCch-----------hHH----HHHHhHHHhcCCeEEe-
Confidence 44556665555 554433211 258899999964211 111 2345556788999999
Q ss_pred CCCCCCCCCCcccch-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 719 PTTPIIGEGDEEAND-----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 719 ~~~~~~G~G~~~~~~-----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
.+..|+|.+.... .......+|+.+.++.+ +.+++.++|||+||.+++.++.++|+ +.++|++++.
T Consensus 57 --~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~ 127 (279)
T 4g9e_A 57 --PDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL------GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTP 127 (279)
T ss_dssp --ECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH------TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCC
T ss_pred --ecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh------CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCC
Confidence 6667888775421 12344455555555544 33589999999999999999999998 6777766654
Q ss_pred CCCCCC-------CCCC--cccc-------------------chhh-hc------------HHHHH---hcCcccccCCC
Q 002194 794 YNRTLT-------PFGF--QNED-------------------RTLW-EA------------TSTYV---EMSPFMSANKL 829 (954)
Q Consensus 794 ~~~~~~-------~~~~--~~~~-------------------~~~~-~~------------~~~~~---~~sp~~~~~~~ 829 (954)
...... .... .... ...+ .. ...+. ..+....+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 207 (279)
T 4g9e_A 128 PVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEA 207 (279)
T ss_dssp CCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHC
T ss_pred CCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhc
Confidence 221100 0000 0000 0000 00 00000 01222235667
Q ss_pred CCCEEEEEeCCCCCCCCchHHHHHHH-HHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhccc
Q 002194 830 KKPILLVHGEEDNNSGTLTMQSDRFF-NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (954)
Q Consensus 830 ~~P~Lii~G~~D~~v~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (954)
++|+|+++|++|..+| .+.+.++. +.+ .++++++++++||... .+....+.+.+.+||++....
T Consensus 208 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 208 QLPIAVVNGRDEPFVE--LDFVSKVKFGNL----WEGKTHVIDNAGHAPF-REAPAEFDAYLARFIRDCTQL 272 (279)
T ss_dssp CSCEEEEEETTCSSBC--HHHHTTCCCSSB----GGGSCEEETTCCSCHH-HHSHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEcCCCcccc--hHHHHHHhhccC----CCCeEEEECCCCcchH-HhCHHHHHHHHHHHHHHhhhh
Confidence 8999999999999998 77766654 322 2357889999999863 566788899999999987643
No 235
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.55 E-value=2.9e-12 Score=138.28 Aligned_cols=245 Identities=9% Similarity=0.039 Sum_probs=158.2
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+...+|||||++|+.... ...|.++|+++++........... +..+.|+|||+.|+...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~---------dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s------ 74 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLY---------SGRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGS------ 74 (304)
T ss_dssp SCEEEEEECSSSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEE------
T ss_pred CceEEEEECCCCCEEEEEcC---------CCcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEEC------
Confidence 36889999999999988652 456777788887654433333222 66889999999998761
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCCcE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~ 345 (954)
....|.++|+ +|+. ..+... ..+..++|+|||++
T Consensus 75 -------------------------------------------~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 75 -------------------------------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp -------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred -------------------------------------------CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 1234677788 6643 344444 77889999999999
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCc-eEEE-eccCCCcccCCccccccccCccceeeccC-CCCceEEEEeccC
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSD-KPSTLYWAETQDG 422 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~-~~~~-l~~~~~~~~~p~~~~~~~~g~~~~~wspD-g~~i~~~~~~~~~ 422 (954)
|+..+.+ +.+.+||++.+ .... +..+ ...+..++|+|+ ++.++..
T Consensus 112 l~sgs~D-------------~~v~lWd~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~l~sg------ 159 (304)
T 2ynn_A 112 VLSGSDD-------------LTVKLWNWENNWALEQTFEGH-------------EHFVMCVAFNPKDPSTFASG------ 159 (304)
T ss_dssp EEEEETT-------------SCEEEEEGGGTTEEEEEECCC-------------CSCEEEEEECTTCTTEEEEE------
T ss_pred EEEECCC-------------CeEEEEECCCCcchhhhhccc-------------CCcEEEEEECCCCCCEEEEE------
Confidence 9887743 38999999854 3322 2221 234567899995 5544433
Q ss_pred CCccccccCCCeEEEEecCCCCCCCceEEe-ecccccCceeecc--CCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002194 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCD--DSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (954)
Q Consensus 423 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~sp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 499 (954)
+..+.|.+|++ ..+.....+. .....+..+.|+| |++.|+..+.++ .|.++|+.++ +.....
T Consensus 160 -------s~D~~v~iwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~----~i~iWd~~~~--~~~~~~ 224 (304)
T 2ynn_A 160 -------CLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQTK--SCVATL 224 (304)
T ss_dssp -------ETTSEEEEEET--TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS----EEEEEETTTT--EEEEEE
T ss_pred -------eCCCeEEEEEC--CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC----eEEEEeCCCC--ccceee
Confidence 33557899996 2333333443 2334556677776 677777765543 3555566654 333333
Q ss_pred cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEec
Q 002194 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (954)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 569 (954)
..+...+.. +.|+|++++|+.... ...|.+||+.+++..+...
T Consensus 225 ~~h~~~v~~------~~~~p~~~~l~s~s~---------------------Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 225 EGHMSNVSF------AVFHPTLPIIISGSE---------------------DGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp ECCSSCEEE------EEECSSSSEEEEEET---------------------TSCEEEEETTTCCEEEEEC
T ss_pred CCCCCCEEE------EEECCCCCEEEEEcC---------------------CCeEEEEECCCCceeeecc
Confidence 444443333 789999998887662 2249999999988765544
No 236
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.55 E-value=1.1e-12 Score=148.31 Aligned_cols=276 Identities=11% Similarity=0.084 Sum_probs=174.9
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+....|+|||+.|+.... ...|.++|.++++........... +..++|+|||+.|+...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~---------Dg~i~vwd~~~~~~~~~l~~h~~~----V~~v~~~~~~~~l~sgs------ 169 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASE---------DATIKVWDYETGDFERTLKGHTDS----VQDISFDHSGKLLASCS------ 169 (410)
T ss_dssp SCEEEEEECSSSSEEEEEES---------SSCEEEEETTTCCCCEEECCCSSC----EEEEEECTTSSEEEEEE------
T ss_pred CcEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCcEEEEEeccCCc----EEEEEEcCCCCEEEEEe------
Confidence 46888999999998887552 457778888887765444333322 67899999999888762
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCCcE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~ 345 (954)
. ...|.++|+ +++. +.+... ..+..++|+|||++
T Consensus 170 ---------------~----------------------------D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 170 ---------------A----------------------------DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp ---------------T----------------------------TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred ---------------C----------------------------CCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 1 123445676 5543 333333 67889999999999
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
|+..+.+ +.+.+||+..+. .+.+..+. ..+..+.|+|||+.++..
T Consensus 207 l~s~s~D-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~g~~l~s~-------- 252 (410)
T 1vyh_C 207 IVSASRD-------------KTIKMWEVQTGYCVKTFTGHR-------------EWVRMVRPNQDGTLIASC-------- 252 (410)
T ss_dssp EEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEEeCC-------------CeEEEEECCCCcEEEEEeCCC-------------ccEEEEEECCCCCEEEEE--------
Confidence 9887743 389999998554 34443321 345678999999866554
Q ss_pred ccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccC--------------------CceEEEEEeccccceEEE
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDD--------------------SLALVYESWYKTRRTRTW 484 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spD--------------------g~~l~~~~~~~~~~~~l~ 484 (954)
+..+.|.+|++ ..+.....+..+...+..++|+|+ |..|+..+.++ .|.
T Consensus 253 -----s~D~~v~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~----~i~ 321 (410)
T 1vyh_C 253 -----SNDQTVRVWVV--ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK----TIK 321 (410)
T ss_dssp -----ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS----EEE
T ss_pred -----cCCCeEEEEEC--CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC----eEE
Confidence 33557888986 233333445566667788999997 44566554433 366
Q ss_pred EEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCe
Q 002194 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSK 564 (954)
Q Consensus 485 ~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 564 (954)
++|+.++ ........+...+.. +.|+|+|++|+.... ...|++||+.+++.
T Consensus 322 iwd~~~~--~~~~~~~~h~~~v~~------v~~~~~g~~l~s~s~---------------------D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 322 MWDVSTG--MCLMTLVGHDNWVRG------VLFHSGGKFILSCAD---------------------DKTLRVWDYKNKRC 372 (410)
T ss_dssp EEETTTT--EEEEEEECCSSCEEE------EEECSSSSCEEEEET---------------------TTEEEEECCTTSCC
T ss_pred EEECCCC--ceEEEEECCCCcEEE------EEEcCCCCEEEEEeC---------------------CCeEEEEECCCCce
Confidence 6676664 223333333333333 789999999887652 23599999988765
Q ss_pred EEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEE
Q 002194 565 ERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQS 615 (954)
Q Consensus 565 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~ 615 (954)
......... .+.. .+|+|++..++.... -..+.+|+
T Consensus 373 ~~~~~~h~~----~v~~-------l~~~~~~~~l~sgs~----D~~i~vW~ 408 (410)
T 1vyh_C 373 MKTLNAHEH----FVTS-------LDFHKTAPYVVTGSV----DQTVKVWE 408 (410)
T ss_dssp CEEEECCSS----CEEE-------EEECSSSSCEEEEET----TSEEEEEC
T ss_pred EEEEcCCCC----cEEE-------EEEcCCCCEEEEEeC----CCcEEEEe
Confidence 433322211 1222 468888886653322 23466655
No 237
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.55 E-value=3.4e-14 Score=158.39 Aligned_cols=71 Identities=10% Similarity=0.116 Sum_probs=60.5
Q ss_pred ccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC-CCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 825 SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF-ESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 825 ~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
.+.++++|+|+++|++|..+| +..++++++.++..+.+++++++++ +||... .+..+.+.+.|.+||++++
T Consensus 302 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 302 ALSNVEANVLMIPCKQDLLQP--SRYNYKMVDLLQKQGKYAEVYEIESINGHMAG-VFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHTCCSEEEEECBTTCSSSC--THHHHHHHHHHHHTTCCEEECCBCCTTGGGHH-HHCGGGTHHHHHHHHHSCC
T ss_pred HHhhCCCCEEEEecCCccccC--HHHHHHHHHHHHhcCCCceEEEcCCCCCCcch-hcCHHHHHHHHHHHHHhhh
Confidence 456789999999999999998 8999999999988777799999998 999763 3455678888999998765
No 238
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.55 E-value=9.2e-13 Score=150.97 Aligned_cols=192 Identities=11% Similarity=0.038 Sum_probs=124.3
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECC--CCceeeccc---CCCccccccccceeEecCCeEEEEEecC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKARPLFQ---SPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~--~g~~~~lt~---~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (954)
.+..++|||||++|+++.. . ...|.++++. +++..+... .+.. +..++|+|||+.|++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~------~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~-----v~~~~~sp~~~~l~~~~-- 168 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD------S--DKSLLVFDVDKTSKNVLKLRKRFCFSKR-----PNAISIAEDDTTVIIAD-- 168 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG------G--GTEEEEEEECSSSSSCEEEEEEEECSSC-----EEEEEECTTSSEEEEEE--
T ss_pred ceEEEEEcCCCCEEEEEEC------C--CCeEEEEECcCCCCceeeeeecccCCCC-----ceEEEEcCCCCEEEEEe--
Confidence 4788999999999866542 2 2345555555 665544432 1221 66899999999998761
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-----EcCCC-cccccc
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-----EIGPP-AVYTSL 337 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-----~l~~~-~~~~~~ 337 (954)
....++.+++ ++... .+... ..+..+
T Consensus 169 -----------------------------------------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 201 (450)
T 2vdu_B 169 -----------------------------------------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDV 201 (450)
T ss_dssp -----------------------------------------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEE
T ss_pred -----------------------------------------------CCCcEEEEecCCcccccccceeeecccCceEEE
Confidence 1245788888 65433 22222 667889
Q ss_pred ccCCC---CcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002194 338 DPSPD---EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (954)
Q Consensus 338 ~~SpD---Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i 413 (954)
+|+|| |++|+..+.+ +.|.+||+..+. ...+.. +....+..++|+ ||+.+
T Consensus 202 ~~sp~~~~~~~l~s~~~d-------------~~i~vwd~~~~~~~~~~~~------------~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 202 HLIKDSDGHQFIITSDRD-------------EHIKISHYPQCFIVDKWLF------------GHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp EEEECTTSCEEEEEEETT-------------SCEEEEEESCTTCEEEECC------------CCSSCEEEEEEC-STTEE
T ss_pred EEcCCCCCCcEEEEEcCC-------------CcEEEEECCCCceeeeeec------------CCCCceEEEEEC-CCCEE
Confidence 99999 9888887743 389999998554 333221 112345789999 99876
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCCC-ceEEee-------------------------cccccCceeeccCC
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHK-------------------------LDLRYGGISWCDDS 467 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~-------------------------~~~~~~~~~~spDg 467 (954)
+.. +..+.|.+|++ ..++ ...+.. ....+..+.|+|||
T Consensus 256 ~s~-------------~~d~~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 256 LSA-------------GGDDKIFAWDW---KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp EEE-------------ESSSEEEEEET---TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred EEE-------------eCCCeEEEEEC---CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 655 34568999996 4444 333321 12345678999999
Q ss_pred ceEEEEEeccccceEEEEE
Q 002194 468 LALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 468 ~~l~~~~~~~~~~~~l~~~ 486 (954)
+.|+.....++ ...||.+
T Consensus 320 ~~l~~~~~~d~-~i~iw~~ 337 (450)
T 2vdu_B 320 PFVAFFVEATK-CIIILEM 337 (450)
T ss_dssp SEEEEEETTCS-EEEEEEE
T ss_pred CEEEEEECCCC-eEEEEEe
Confidence 99988874443 3667766
No 239
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.55 E-value=6.2e-14 Score=140.42 Aligned_cols=183 Identities=9% Similarity=-0.099 Sum_probs=114.7
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC-CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~ 748 (954)
.|+||++||+..... ....+.......|+++ ||.|+.++.+ |++.. ++...++
T Consensus 4 ~p~vv~lHG~~~~~~-----------~~~~~~~~~~~~l~~~~g~~vi~~d~~---g~~~~------------~~~~~~~ 57 (194)
T 2qs9_A 4 PSKAVIVPGNGGGDV-----------TTHGWYGWVKKELEKIPGFQCLAKNMP---DPITA------------RESIWLP 57 (194)
T ss_dssp CCEEEEECCSSSSCT-----------TTSTTHHHHHHHHTTSTTCCEEECCCS---STTTC------------CHHHHHH
T ss_pred CCEEEEECCCCCCCc-----------ccchHHHHHHHHHhhccCceEEEeeCC---CCCcc------------cHHHHHH
Confidence 689999999642100 0011111245566666 9999995554 43211 1122333
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCC
Q 002194 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANK 828 (954)
Q Consensus 749 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 828 (954)
.+.+.-.+ .+++.++||||||.+++.++.++| ++++|+++|........ .......+. .......+.+
T Consensus 58 ~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~ 125 (194)
T 2qs9_A 58 FMETELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDE---NERASGYFT------RPWQWEKIKA 125 (194)
T ss_dssp HHHHTSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCH---HHHHTSTTS------SCCCHHHHHH
T ss_pred HHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchh---hhHHHhhhc------ccccHHHHHh
Confidence 34443222 378999999999999999999997 99999999865421100 000000000 0011122233
Q ss_pred CCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 829 LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 829 ~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+..|+|++||++|..+| ++.++++.+.+ . .++.++++++|.+. .+.. +.+..+++||++...
T Consensus 126 ~~~p~lii~G~~D~~vp--~~~~~~~~~~~-~----~~~~~~~~~gH~~~-~~~p-~~~~~~~~fl~~~~~ 187 (194)
T 2qs9_A 126 NCPYIVQFGSTDDPFLP--WKEQQEVADRL-E----TKLHKFTDCGHFQN-TEFH-ELITVVKSLLKVPAL 187 (194)
T ss_dssp HCSEEEEEEETTCSSSC--HHHHHHHHHHH-T----CEEEEESSCTTSCS-SCCH-HHHHHHHHHHTCCCC
T ss_pred hCCCEEEEEeCCCCcCC--HHHHHHHHHhc-C----CeEEEeCCCCCccc-hhCH-HHHHHHHHHHHhhhh
Confidence 46799999999999999 99999998888 3 48899999999875 3443 445666799887543
No 240
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.55 E-value=5.1e-14 Score=158.31 Aligned_cols=151 Identities=19% Similarity=0.265 Sum_probs=92.2
Q ss_pred CceEEEEEEcCC--C--eEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCC
Q 002194 637 LQKELIKYQRKD--G--VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG 712 (954)
Q Consensus 637 ~~~~~~~~~~~~--g--~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G 712 (954)
+...++.|.+.+ | ..+.++++.|.+..+ .++.|+||++||+.............. .......+..|+++|
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~--~~~~P~vv~~HG~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~G 117 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGERC--SGPYPLLGWGHPTEALRAQEQAKEIRD----AKGDDPLVTRLASQG 117 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTTC--CSCEEEEEEECCCCCBTTCCHHHHHHH----TTTCSHHHHTTGGGT
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCCC--CCCCcEEEEeCCCcCCCCccccccccc----ccchHHHHHHHHHCC
Confidence 445667776554 4 468999999987533 245899999999753221100000000 001224567788999
Q ss_pred cEEEEcCCCCCCCCCCcccc-hh-----hHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHh-CC---
Q 002194 713 FAILGGPTTPIIGEGDEEAN-DR-----FVEQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAH-AP--- 781 (954)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~-~~-----~~~~~~~D~~~av~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~-~p--- 781 (954)
|.|+++++ +|+|.+... .. .....+.|...++..+.++ +..|+++|+++||||||.++++++.. .+
T Consensus 118 ~~V~~~D~---~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 194 (397)
T 3h2g_A 118 YVVVGSDY---LGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLS 194 (397)
T ss_dssp CEEEEECC---TTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred CEEEEecC---CCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcC
Confidence 99999555 566654211 11 1123455566666655554 54567899999999999999888732 22
Q ss_pred --CcccEEEEeccCCCC
Q 002194 782 --HLFCCGIARSGAYNR 796 (954)
Q Consensus 782 --~~~~a~v~~~~~~~~ 796 (954)
-.+.++++.++.++.
T Consensus 195 ~~~~~~~~~~~~~~~~l 211 (397)
T 3h2g_A 195 KEFHLVASAPISGPYAL 211 (397)
T ss_dssp TTSEEEEEEEESCCSSH
T ss_pred cCcceEEEecccccccH
Confidence 157788887776553
No 241
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.54 E-value=9e-13 Score=146.16 Aligned_cols=263 Identities=10% Similarity=0.021 Sum_probs=150.2
Q ss_pred cCCCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCC
Q 002194 107 DAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP 186 (954)
Q Consensus 107 ~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~ 186 (954)
....+..++|||||++|+++..+ . ... ..|.+|++..++ +..+.+....
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~----------------------~-~~~------~~v~~~~~~~~~--g~~~~~~~~~ 96 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEF----------------------S-KDQ------AAVSAFAFDKEK--GTLHLLNTQK 96 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECC----------------------S-STT------CEEEEEEEETTT--TEEEEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEcc----------------------C-CCC------CcEEEEEEeCCC--CcEEEeeEec
Confidence 34467789999999999888762 0 000 267777775432 3444443322
Q ss_pred -CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCC-Cceeeccc---CCCcc------ccccccceeEecCC
Q 002194 187 -DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKARPLFQ---SPDIY------LNAIFDNFVWVNNS 255 (954)
Q Consensus 187 -~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~-g~~~~lt~---~~~~~------~~~~~~~~~wspDG 255 (954)
.+......++ ||++|+++.. ....|.+++++. +....+.. ..... ....+..++|+|||
T Consensus 97 ~~~~~p~~~~~--dg~~l~~~~~--------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 97 TMGADPCYLTT--NGKNIVTANY--------SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp CSSSCEEEEEE--CSSEEEEEET--------TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred cCCCCcEEEEE--CCCEEEEEEC--------CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 2223444555 8998877542 234566666653 33322211 11100 00012458999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe---CC----c-e--
Q 002194 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL---DG----T-V-- 325 (954)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~---~G----~-~-- 325 (954)
++|+++.. +...|+++++ ++ + .
T Consensus 167 ~~l~~~~~------------------------------------------------~~~~v~v~~~~~~~~~~~~~~l~~ 198 (361)
T 3scy_A 167 KYLLADDL------------------------------------------------GTDQIHKFNINPNANADNKEKFLT 198 (361)
T ss_dssp SEEEEEET------------------------------------------------TTTEEEEEEECTTCCTTTCCCCEE
T ss_pred CEEEEEeC------------------------------------------------CCCEEEEEEEcCCCCcccccceee
Confidence 98887610 1223555554 22 2 1
Q ss_pred -----e-EcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCcccccccc
Q 002194 326 -----K-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRK 399 (954)
Q Consensus 326 -----~-~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~ 399 (954)
. .+........++|||||++|++.... .+.+.+|+++++..+.+....... ....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------------~~~v~v~~~~~g~~~~~~~~~~~~-------~~~~ 259 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI------------GGTVIAFRYADGMLDEIQTVAADT-------VNAQ 259 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TCEEEEEEEETTEEEEEEEEESCS-------SCCC
T ss_pred cccccceecCCCCCCeEEEEcCCCCEEEEEcCC------------CCeEEEEEecCCceEEeEEEecCC-------CCCC
Confidence 1 12222456688999999998887632 237999999877655443321110 0012
Q ss_pred CccceeeccCCCCceEEEEeccCCCccccccC-CCeEEEEecCCCCCCCceEEee--cccccCceeeccCCceEEEEEec
Q 002194 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTP-RDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWY 476 (954)
Q Consensus 400 g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~~ 476 (954)
+...++|||||+.|++. . .. .+.|.+|++++ .+++.+.+.. ....+..++|||||++|+++...
T Consensus 260 ~~~~i~~spdg~~l~v~-~-----------~~~~~~i~v~~~~~-~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYAS-N-----------RLKADGVAIFKVDE-TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp CEEEEEECTTSSEEEEE-E-----------CSSSCEEEEEEECT-TTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred CcccEEECCCCCEEEEE-C-----------CCCCCEEEEEEEcC-CCCcEEEeeEecCCCCCceEEECCCCCEEEEEECC
Confidence 34579999999976554 1 11 34677777522 2344444422 23356779999999999887644
Q ss_pred cccceEEEEEcCCCC
Q 002194 477 KTRRTRTWVISPGSK 491 (954)
Q Consensus 477 ~~~~~~l~~~d~~~~ 491 (954)
.+ ...+|.+|..++
T Consensus 327 ~~-~v~v~~~d~~~g 340 (361)
T 3scy_A 327 TN-VIQIFERDQATG 340 (361)
T ss_dssp TT-EEEEEEECTTTC
T ss_pred CC-CEEEEEEECCCC
Confidence 43 477888998775
No 242
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.54 E-value=5.4e-12 Score=141.01 Aligned_cols=300 Identities=9% Similarity=0.046 Sum_probs=181.0
Q ss_pred CcccceeecCCC-CeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEec-CCeEEEEEecCCC
Q 002194 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLLR 266 (954)
Q Consensus 189 ~~~~~~~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~~ 266 (954)
..+..+.|+||| +.|+.... ...|.++++.+++......... ....+..+.|+| |++.|+...
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~---- 138 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK---------GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVSS---- 138 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB---------TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEEE----
T ss_pred CCEEEEEECCCCCCEEEEEcC---------CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEEe----
Confidence 468889999999 77776542 4567788888776655443211 112277899999 677777651
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC----ccccccccCC
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP----AVYTSLDPSP 341 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~----~~~~~~~~Sp 341 (954)
....|.++++ ++....+... ..+..++|+|
T Consensus 139 ---------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 139 ---------------------------------------------IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp ---------------------------------------------TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred ---------------------------------------------CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 1234667777 4444444322 4577899999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~ 421 (954)
||+.|+..+.+ +.+.+||+++.....+..+. ..+..++|+||++.+++..
T Consensus 174 ~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~l~s~---- 223 (383)
T 3ei3_B 174 SRQMLATGDST-------------GRLLLLGLDGHEIFKEKLHK-------------AKVTHAEFNPRCDWLMATS---- 223 (383)
T ss_dssp TTTEEEEEETT-------------SEEEEEETTSCEEEEEECSS-------------SCEEEEEECSSCTTEEEEE----
T ss_pred CCCEEEEECCC-------------CCEEEEECCCCEEEEeccCC-------------CcEEEEEECCCCCCEEEEE----
Confidence 99999888743 38999999877666655432 3457899999999544441
Q ss_pred CCCccccccCCCeEEEEecCCCCC-CCceEEeecccccCceeecc-CCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQG-EGPEILHKLDLRYGGISWCD-DSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g-~~~~~l~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 499 (954)
+..+.|.+|++..... +.......+...+..++|+| ||+.|+..+.++ .|.++|+.++. ....+.
T Consensus 224 --------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~----~i~iwd~~~~~-~~~~~~ 290 (383)
T 3ei3_B 224 --------SVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRN----EIRVYSSYDWS-KPDQII 290 (383)
T ss_dssp --------ETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSS----EEEEEETTBTT-SCSEEE
T ss_pred --------eCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCC----cEEEEECCCCc-cccccc
Confidence 2345788998611110 23333345667788899999 999998776543 46666666652 222222
Q ss_pred cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccccccee
Q 002194 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (954)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 579 (954)
... ...+.........|+|++..++...... +.+ .+ +....|++||+.+++.......... ...
T Consensus 291 ~~~-~~~~~~~~~~~~~~~p~~~~~~~~~s~d----g~~--s~------s~d~~i~iwd~~~~~~~~~l~~~~~---~~~ 354 (383)
T 3ei3_B 291 IHP-HRQFQHLTPIKATWHPMYDLIVAGRYPD----DQL--LL------NDKRTIDIYDANSGGLVHQLRDPNA---AGI 354 (383)
T ss_dssp ECC-BCCCTTSCCCCCEECSSSSEEEEECBCC----TTT--CT------TCCCCEEEEETTTCCEEEEECBTTB---CSC
T ss_pred ccc-ccccccccceEEeccCCCCceEEEecCC----ccc--cc------CCCCeEEEEecCCCceeeeecCCCC---Cce
Confidence 111 1111111111256888888776554221 111 11 1244699999998887554443211 000
Q ss_pred EEeccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002194 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (954)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~ 618 (954)
. ...+|+||++.|+.. + -..+.+|++.+
T Consensus 355 ~------~~~~~s~~g~~l~s~-s----d~~i~iw~~~~ 382 (383)
T 3ei3_B 355 I------SLNKFSPTGDVLASG-M----GFNILIWNRED 382 (383)
T ss_dssp C------CEEEECTTSSEEEEE-E----TTEEEEEECC-
T ss_pred E------EEEEEecCccEEEEe-c----CCcEEEEecCC
Confidence 1 113689999877554 3 25688888653
No 243
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.54 E-value=5.6e-14 Score=150.28 Aligned_cols=215 Identities=16% Similarity=0.114 Sum_probs=133.5
Q ss_pred EcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCC
Q 002194 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (954)
Q Consensus 645 ~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~ 724 (954)
...+|.+++....-++ + .|+||++||...... ....+. .....|+ ++|.|++ .+.+
T Consensus 12 ~~~~g~~l~y~~~g~~-----g---~p~vvllHG~~~~~~-----------~~~~~~-~~~~~L~-~~~~vi~---~D~~ 67 (285)
T 1c4x_A 12 FPSGTLASHALVAGDP-----Q---SPAVVLLHGAGPGAH-----------AASNWR-PIIPDLA-ENFFVVA---PDLI 67 (285)
T ss_dssp ECCTTSCEEEEEESCT-----T---SCEEEEECCCSTTCC-----------HHHHHG-GGHHHHH-TTSEEEE---ECCT
T ss_pred EEECCEEEEEEecCCC-----C---CCEEEEEeCCCCCCc-----------chhhHH-HHHHHHh-hCcEEEE---ecCC
Confidence 3457777776554211 1 477999999521000 000111 1233444 4599999 6667
Q ss_pred CCCCcccch---hhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCC
Q 002194 725 GEGDEEAND---RFVEQL----VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (954)
Q Consensus 725 G~G~~~~~~---~~~~~~----~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (954)
|+|.+.... ...... .+|+.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++.....
T Consensus 68 G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 141 (285)
T 1c4x_A 68 GFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF------GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPM 141 (285)
T ss_dssp TSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC
T ss_pred CCCCCCCCCCcccchhhhhhhHHHHHHHHHHHh------CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCC
Confidence 888775432 223444 66666665554 23589999999999999999999999999999998754211
Q ss_pred CC--C-----CC------------------Cccccc----h----hhh---cHHHHH---h------------cCccccc
Q 002194 798 LT--P-----FG------------------FQNEDR----T----LWE---ATSTYV---E------------MSPFMSA 826 (954)
Q Consensus 798 ~~--~-----~~------------------~~~~~~----~----~~~---~~~~~~---~------------~sp~~~~ 826 (954)
.. . +. +..... . .+. .+..+. . ......+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (285)
T 1c4x_A 142 NARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATL 221 (285)
T ss_dssp SSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHH
T ss_pred CccchhHHHHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhh
Confidence 00 0 00 000000 0 000 000000 0 0112345
Q ss_pred CCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
.++++|+|+++|++|..+| +..++++.+.+. +.++++++++||... .+....+.+.+.+||.+
T Consensus 222 ~~i~~P~lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 222 GRLPHDVLVFHGRQDRIVP--LDTSLYLTKHLK----HAELVVLDRCGHWAQ-LERWDAMGPMLMEHFRA 284 (285)
T ss_dssp TTCCSCEEEEEETTCSSSC--THHHHHHHHHCS----SEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEEeCCCeeeC--HHHHHHHHHhCC----CceEEEeCCCCcchh-hcCHHHHHHHHHHHHhc
Confidence 7789999999999999998 888887776553 469999999999864 45667888888888863
No 244
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.54 E-value=4e-12 Score=142.03 Aligned_cols=297 Identities=9% Similarity=0.044 Sum_probs=173.2
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+....|||||++|+..+. ...|.++|+.+++........... +..++|+|||+.|+...
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~---------D~~v~iWd~~~~~~~~~~~~h~~~----v~~~~~s~~g~~las~~------ 127 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQ---------DGRLIVWNALTSQKTHAIKLHCPW----VMECAFAPNGQSVACGG------ 127 (380)
T ss_dssp SCEEEEEECTTSSCEEEEET---------TSEEEEEETTTTEEEEEEECCCTT----CCCCEECTTSSEEEECC------
T ss_pred cEEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCccceEEecCCCC----EEEEEECCCCCEEEEee------
Confidence 46889999999999988652 557788898887655443333322 67899999999988651
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC--------ceeEcCCC-ccccccc
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG--------TVKEIGPP-AVYTSLD 338 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G--------~~~~l~~~-~~~~~~~ 338 (954)
.+ + .+.++++ ++ ..+.+... +.+....
T Consensus 128 ---------------~d--------------------------~--~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 128 ---------------LD--------------------------S--ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp ---------------SS--------------------------S--CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred ---------------CC--------------------------C--cEEEEECCCCccccCCccceeeccCCCcceEEEE
Confidence 11 1 1233343 21 11223333 6677889
Q ss_pred cCCCCcE-EEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc-CCCCceEE
Q 002194 339 PSPDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYW 416 (954)
Q Consensus 339 ~SpDGk~-l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp-Dg~~i~~~ 416 (954)
|+|++.. |+..+. ++.+.+||+.+++.......... .+....+..+.|++ |++.++..
T Consensus 165 ~~~~~~~~l~s~s~-------------D~~i~~wd~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 165 YVPDQETRLITGSG-------------DQTCVLWDVTTGQRISIFGSEFP-------SGHTADVLSLSINSLNANMFISG 224 (380)
T ss_dssp CCSSSSSCEEEECT-------------TSCEEEECTTTCCEEEEECCCSS-------SSCCSCEEEEEECSSSCCEEEEE
T ss_pred EecCCCCEEEEECC-------------CCcEEEEEcCCCcEEEEeecccC-------CCCccCeEEEEeecCCCCEEEEE
Confidence 9998654 555442 23899999986654332211100 01223456678876 66544433
Q ss_pred EEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcE
Q 002194 417 AETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (954)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (954)
+..+.|.+|++ ...+...+.+..+...+..++|+|||+.|+..+.++. |.++|+.++ ...
T Consensus 225 -------------s~D~~v~~wd~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~----i~lwd~~~~--~~~ 284 (380)
T 3iz6_a 225 -------------SCDTTVRLWDL-RITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT----CRLFDMRTG--HQL 284 (380)
T ss_dssp -------------ETTSCEEEEET-TTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC----EEEEETTTT--EEE
T ss_pred -------------ECCCeEEEEEC-CCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe----EEEEECCCC--cEE
Confidence 33557889996 1122344566677888999999999999888765543 445555554 223
Q ss_pred EEecCCCCCcc-CCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccc
Q 002194 497 ILFDRSSEDVY-SDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKY 575 (954)
Q Consensus 497 ~l~~~~~~~~~-~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 575 (954)
........... ..+....++|+|+|++++.... ...|++||+.+++.......-..
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~---------------------dg~i~vwd~~~~~~~~~~~~~~~-- 341 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS---------------------NGDCYVWDTLLAEMVLNLGTLQN-- 341 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT---------------------TSCEEEEETTTCCEEEEECCSCS--
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEEC---------------------CCCEEEEECCCCceEEEEecccC--
Confidence 33222111000 0000112789999998887651 23499999988775433211100
Q ss_pred cceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002194 576 YETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (954)
Q Consensus 576 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g 619 (954)
.+.. .-...+|||||+.|+.... -..+.+|++.+.
T Consensus 342 --~h~~---~v~~l~~s~dg~~l~sgs~----D~~i~iW~~~~~ 376 (380)
T 3iz6_a 342 --SHEG---RISCLGLSSDGSALCTGSW----DKNLKIWAFSGH 376 (380)
T ss_dssp --SCCC---CCCEEEECSSSSEEEEECT----TSCEEEEECCSS
T ss_pred --CCCC---ceEEEEECCCCCEEEEeeC----CCCEEEEecCCC
Confidence 0000 0112579999987653222 345888887654
No 245
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.54 E-value=1.1e-12 Score=142.04 Aligned_cols=254 Identities=15% Similarity=0.105 Sum_probs=156.7
Q ss_pred eceEEEEccCCCCCCceee-eecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcc
Q 002194 163 TGIGIHQLFPDGKLGQEIE-IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~-lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 241 (954)
..|+||++.+ ++..+ +....+...+..++|+|||+.|+... ....|.++++++++..+.......
T Consensus 45 ~tV~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs---------~Dg~v~iw~~~~~~~~~~~~~h~~- 110 (318)
T 4ggc_A 45 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---------SSAEVQLWDVQQQKRLRNMTSHSA- 110 (318)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSS-
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEE---------CCCcEEEeecCCceeEEEecCccc-
Confidence 4799999864 44333 33222334688999999999998754 245788889888876554433332
Q ss_pred ccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe
Q 002194 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (954)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~ 321 (954)
....++++++.++... ....+...+.
T Consensus 111 -----~~~~~~~~~~~l~s~~-------------------------------------------------~~~~~~~~~~ 136 (318)
T 4ggc_A 111 -----RVGSLSWNSYILSSGS-------------------------------------------------RSGHIHHHDV 136 (318)
T ss_dssp -----CEEEEEEETTEEEEEE-------------------------------------------------TTSEEEEEET
T ss_pred -----eEEEeecCCCEEEEEe-------------------------------------------------cCCceEeeec
Confidence 2445777888777551 1112333343
Q ss_pred -CC--ceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCcccccc
Q 002194 322 -DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSV 397 (954)
Q Consensus 322 -~G--~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~ 397 (954)
.+ ....+... ..+....++++|+.|+..+.+ +.+.+||+..++....... .....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~--------~~~~~ 195 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQ--------TFTQH 195 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCBTTBSCCSE--------EECCC
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-------------cceeEEECCCCccccccee--------eeccc
Confidence 22 22223333 566778899999999887743 3899999885431110000 00011
Q ss_pred ccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEecc
Q 002194 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (954)
Q Consensus 398 ~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 477 (954)
...+..+.|+|++..+++.... +....|.+|+. ..............+....|+|+++.++.++...
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~----------~~~~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEEC----------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred CCceEEEEecCCCCcEEEEEec----------CCCCEEEEEec---ccccccccccceeeeeeeeecccccceEEEEEcC
Confidence 1334678899999887765221 23457888885 4444444455566677889999999998876433
Q ss_pred ccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 478 TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 478 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
. ..|+++|+.++ +.......+...+.. ++|+|||++|+...
T Consensus 263 d--~~i~iwd~~~~--~~~~~l~gH~~~V~~------l~~spdg~~l~S~s 303 (318)
T 4ggc_A 263 Q--NQLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAA 303 (318)
T ss_dssp T--CCEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEE
T ss_pred C--CEEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEe
Confidence 3 23666677664 444444555555554 88999999988766
No 246
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.54 E-value=6.9e-12 Score=135.81 Aligned_cols=279 Identities=10% Similarity=0.131 Sum_probs=171.5
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+..+.|+|||++|+.... ...|.+++..+++........... +..++|+|||+.|+...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~---------dg~i~iw~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~------ 84 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSA---------DKLIKIWGAYDGKFEKTISGHKLG----ISDVAWSSDSNLLVSAS------ 84 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET---------TSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEE------
T ss_pred CcEEEEEECCCCCEEEEeeC---------CCeEEEEeCCCcccchhhccCCCc----eEEEEEcCCCCEEEEEC------
Confidence 46888999999999988652 346677788777665544333322 67899999999998761
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccccccCCCCcE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKY 345 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~ 345 (954)
....|.++++ +++ ...+... ..+..+.|+|||+.
T Consensus 85 -------------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 85 -------------------------------------------DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp -------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred -------------------------------------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 1234677787 664 3344444 66788899999999
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
|+..+.+ +.+.+||+..++ ...+..+. ..+..+.|+|||+.++..
T Consensus 122 l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~-------- 167 (312)
T 4ery_A 122 IVSGSFD-------------ESVRIWDVKTGKCLKTLPAHS-------------DPVSAVHFNRDGSLIVSS-------- 167 (312)
T ss_dssp EEEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEEeCC-------------CcEEEEECCCCEEEEEecCCC-------------CcEEEEEEcCCCCEEEEE--------
Confidence 9888743 389999998554 34443321 234678999999866554
Q ss_pred ccccccCCCeEEEEecCCCCCCCc-eEEe-ecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCC
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGEGP-EILH-KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~-~~l~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 502 (954)
+..+.|.+|++ ..++. ..+. .....+..++|+|+|+.|+....++ .|.++|+.++ +........
T Consensus 168 -----~~d~~i~~wd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~--~~~~~~~~~ 233 (312)
T 4ery_A 168 -----SYDGLCRIWDT---ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN----TLKLWDYSKG--KCLKTYTGH 233 (312)
T ss_dssp -----ETTSCEEEEET---TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT----EEEEEETTTT--EEEEEECSS
T ss_pred -----eCCCcEEEEEC---CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC----eEEEEECCCC--cEEEEEEec
Confidence 33557899996 33332 3332 2334456789999999998876443 3666666664 222223222
Q ss_pred CCCccCCCCCCCeeec-cCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEE
Q 002194 503 SEDVYSDPGSPMMRRT-STGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVA 581 (954)
Q Consensus 503 ~~~~~~~~~~~~~~~s-pdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 581 (954)
...... ....++ ++|++++... ....|++||+.+++.......... .+..
T Consensus 234 ~~~~~~----~~~~~~~~~~~~l~sg~---------------------~dg~i~vwd~~~~~~~~~~~~h~~----~v~~ 284 (312)
T 4ery_A 234 KNEKYC----IFANFSVTGGKWIVSGS---------------------EDNLVYIWNLQTKEIVQKLQGHTD----VVIS 284 (312)
T ss_dssp CCSSSC----CCEEEECSSSCEEEECC---------------------TTSCEEEEETTTCCEEEEECCCSS----CEEE
T ss_pred CCceEE----EEEEEEeCCCcEEEEEC---------------------CCCEEEEEECCCchhhhhhhccCC----cEEE
Confidence 211111 012343 4566655443 123499999998876654443221 1121
Q ss_pred eccCCccccccccCCEEEEEEecCCCCceEEEEE
Q 002194 582 LMSDQTEGDLYLNQLKILTSKESKTENTQYYIQS 615 (954)
Q Consensus 582 ~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~ 615 (954)
.+|+|+++.++....+. -..+.+|+
T Consensus 285 -------~~~~p~~~~l~s~~~~~--d~~i~~W~ 309 (312)
T 4ery_A 285 -------TACHPTENIIASAALEN--DKTIKLWK 309 (312)
T ss_dssp -------EEECSSSSEEEEEECTT--TCCEEEEE
T ss_pred -------EeecCcCCceEEEEccC--CccEEEec
Confidence 46888888776543222 23455554
No 247
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.54 E-value=5.4e-14 Score=156.94 Aligned_cols=236 Identities=10% Similarity=0.098 Sum_probs=145.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCC-CC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~-~~ 188 (954)
.+..++|||||++||....+ +.|.+|++.. +..+.+..+. +.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d---------------------------------~~i~iw~~~~----~~~~~~~~~~~h~ 55 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT---------------------------------NQVELYEQDG----NGWKHARTFSDHD 55 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS---------------------------------SCBCEEEEET----TEEEECCCBCCCS
T ss_pred cEEEEEECCCCCEEEEecCC---------------------------------CEEEEEEccC----CceEEEEEEecCC
Confidence 67899999999999987664 4789999854 3212222232 23
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc----eeecccCCCccccccccceeEecCCeEEEEEecC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (954)
..+..+.|+|||+.|+.... ...|.++|+++++ ...+..... .+..+.|+|||+.|+....
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~---------d~~v~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~- 120 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQ---------DRNAYVYEKRPDGTWKQTLVLLRLNR-----AATFVRWSPNEDKFAVGSG- 120 (377)
T ss_dssp SCEEEEEECTTTCCEEEEET---------TSSEEEC------CCCCEEECCCCSS-----CEEEEECCTTSSCCEEEES-
T ss_pred ceEEEEEEeCCCCEEEEEeC---------CCeEEEEEcCCCCceeeeeEecccCC-----ceEEEEECCCCCEEEEEec-
Confidence 47889999999999988652 3456666776665 233333222 2778999999998887611
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc----eeEcCC-C-cccccc
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGP-P-AVYTSL 337 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~----~~~l~~-~-~~~~~~ 337 (954)
...|.++++ +++ .+.+.. . ..+..+
T Consensus 121 ------------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 121 ------------------------------------------------ARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp ------------------------------------------------SSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred ------------------------------------------------CCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 123555566 443 455554 3 778899
Q ss_pred ccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEecc-CCCccc----CC-ccccccccCccceeeccCCC
Q 002194 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD-LPLAED----IP-IAFNSVRKGMRSINWRSDKP 411 (954)
Q Consensus 338 ~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~-~~~~~~----~p-~~~~~~~~g~~~~~wspDg~ 411 (954)
+|+|||++|+..+.+ +.+.+||+..+....... .+.... .. ..+ .....+..++|+|||+
T Consensus 153 ~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 153 DWHPNNVLLAAGCAD-------------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp EECTTSSEEEEEESS-------------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred EEcCCCCEEEEEeCC-------------CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC
Confidence 999999999988744 379999986322110000 000000 00 011 2334567899999999
Q ss_pred CceEEEEeccCCCccccccCCCeEEEEecCCCCCCC----ceEEeecccccCceeeccCCceEEEEE
Q 002194 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYES 474 (954)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~----~~~l~~~~~~~~~~~~spDg~~l~~~~ 474 (954)
.++.. +..+.|.+|++ .++.. ...+..+...+..++|+|||+.|+...
T Consensus 219 ~l~~~-------------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 219 ALAYA-------------GHDSSVTIAYP--SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp CEEEE-------------ETTTEEC-CEE--CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred EEEEE-------------eCCCcEEEEEC--CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 77765 34557888886 33333 344556666788899999999887663
No 248
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.54 E-value=2.4e-13 Score=145.45 Aligned_cols=174 Identities=11% Similarity=0.098 Sum_probs=116.6
Q ss_pred HHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC
Q 002194 706 LLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (954)
Q Consensus 706 ~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 782 (954)
..|++ .|.|++ .|.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+|+.+|.++|+
T Consensus 58 ~~L~~-~~~vi~---~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~va~~~A~~~p~ 127 (286)
T 2puj_A 58 PFVDA-GYRVIL---KDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL------DIDRAHLVGNAMGGATALNFALEYPD 127 (286)
T ss_dssp HHHHT-TCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHhc-cCEEEE---ECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChH
Confidence 44554 599999 6677888886542 22445566666555543 34689999999999999999999999
Q ss_pred cccEEEEeccCCCCCC--C--CC-C------C---cc--------------cc-------chhhh----cHH---HHH--
Q 002194 783 LFCCGIARSGAYNRTL--T--PF-G------F---QN--------------ED-------RTLWE----ATS---TYV-- 818 (954)
Q Consensus 783 ~~~a~v~~~~~~~~~~--~--~~-~------~---~~--------------~~-------~~~~~----~~~---~~~-- 818 (954)
+++++|++++...... . .. . + .. .. ...+. .+. .+.
T Consensus 128 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (286)
T 2puj_A 128 RIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLIS 207 (286)
T ss_dssp GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 9999999987542110 0 00 0 0 00 00 00000 000 000
Q ss_pred -------hcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHH
Q 002194 819 -------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETD 891 (954)
Q Consensus 819 -------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 891 (954)
..+....+.++++|+|+++|++|..+| +..++++.+.+. ..++++++++||... .+....+.+.+.
T Consensus 208 ~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~ 280 (286)
T 2puj_A 208 AQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKLLWNID----DARLHVFSKCGAWAQ-WEHADEFNRLVI 280 (286)
T ss_dssp HHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHSS----SEEEEEESSCCSCHH-HHTHHHHHHHHH
T ss_pred HhhhhccccchhhHHhhcCCCEEEEEECCCCccC--HHHHHHHHHHCC----CCeEEEeCCCCCCcc-ccCHHHHHHHHH
Confidence 112233567789999999999999998 888887776653 369999999999864 556778888899
Q ss_pred HHHHH
Q 002194 892 RWLQK 896 (954)
Q Consensus 892 ~fl~~ 896 (954)
+||.+
T Consensus 281 ~fl~~ 285 (286)
T 2puj_A 281 DFLRH 285 (286)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99864
No 249
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.53 E-value=1.1e-13 Score=154.57 Aligned_cols=178 Identities=11% Similarity=0.036 Sum_probs=113.7
Q ss_pred HHHCCcEEEEcCCCCCCCCCCcccc----------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEeeChHH
Q 002194 708 WLARGFAILGGPTTPIIGEGDEEAN----------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIA-VGGHSYGA 770 (954)
Q Consensus 708 la~~G~~V~~~~~~~~~G~G~~~~~----------------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~-l~G~S~GG 770 (954)
|+++||.|++++.+|. +|.+..+ ........+|+.++++.+ +.+++. |+||||||
T Consensus 94 L~~~g~~vi~~D~~G~--~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~~lvGhS~Gg 165 (377)
T 2b61_A 94 LDTDRYFFISSNVLGG--CKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL------GISHLKAIIGGSFGG 165 (377)
T ss_dssp EETTTCEEEEECCTTC--SSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT------TCCCEEEEEEETHHH
T ss_pred cccCCceEEEecCCCC--CCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc------CCcceeEEEEEChhH
Confidence 4578999999555441 3333221 112344455555554432 345887 99999999
Q ss_pred HHHHHHHHhCCCcccEEEEeccCCCCCC--------------C--CCC---Ccc----c---------------cchhh-
Q 002194 771 FMTANLLAHAPHLFCCGIARSGAYNRTL--------------T--PFG---FQN----E---------------DRTLW- 811 (954)
Q Consensus 771 ~~a~~~a~~~p~~~~a~v~~~~~~~~~~--------------~--~~~---~~~----~---------------~~~~~- 811 (954)
.+|+.+|.++|++++++|++++...... . .+. +.. . ....+
T Consensus 166 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (377)
T 2b61_A 166 MQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLA 245 (377)
T ss_dssp HHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHH
Confidence 9999999999999999999998543210 0 000 000 0 00000
Q ss_pred -----------------hcH------------------------HHHHhcC-------cccccCCCCCCEEEEEeCCCCC
Q 002194 812 -----------------EAT------------------------STYVEMS-------PFMSANKLKKPILLVHGEEDNN 843 (954)
Q Consensus 812 -----------------~~~------------------------~~~~~~s-------p~~~~~~~~~P~Lii~G~~D~~ 843 (954)
... ..+...+ ....+.++++|+|+++|++|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~ 325 (377)
T 2b61_A 246 KAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQL 325 (377)
T ss_dssp HHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSS
T ss_pred HHhccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCccc
Confidence 000 0011111 1345678899999999999999
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEEEeC-CCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 844 SGTLTMQSDRFFNALKGHGALCRLVILP-FESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 844 v~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
+| +.+..+..+.+......+++++++ ++||... .+....+.+.|.+||++
T Consensus 326 ~~--~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 326 FK--PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF-LVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp SC--HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH-HHCHHHHHHHHHHHHHT
T ss_pred CC--ccchHHHHHHHHhcCCCceEEEeCCCCCchhh-hcCHHHHHHHHHHHHhc
Confidence 98 866556666666666678999999 9999874 45567888889999865
No 250
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.53 E-value=1.7e-12 Score=160.80 Aligned_cols=252 Identities=10% Similarity=0.044 Sum_probs=167.6
Q ss_pred eeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEE
Q 002194 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (954)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (954)
+.+.+++ ..+..++|||||++|++... ...|.++++.+++........... +..+.|+|||++|+
T Consensus 7 ~~~~~h~--~~v~~i~~sp~~~~la~~~~---------~g~v~iwd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~ 71 (814)
T 3mkq_A 7 KTFSNRS--DRVKGIDFHPTEPWVLTTLY---------SGRVEIWNYETQVEVRSIQVTETP----VRAGKFIARKNWII 71 (814)
T ss_dssp EEEEEEC--SCEEEEEECSSSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEE
T ss_pred eeeecCC--CceEEEEECCCCCEEEEEeC---------CCEEEEEECCCCceEEEEecCCCc----EEEEEEeCCCCEEE
Confidence 4444433 46889999999999998652 457888898887654443333222 77899999999999
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccc
Q 002194 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTS 336 (954)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~ 336 (954)
+.. ....|.++++ +|+ ...+... ..+..
T Consensus 72 ~~~-------------------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~~v~~ 102 (814)
T 3mkq_A 72 VGS-------------------------------------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRS 102 (814)
T ss_dssp EEE-------------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEe-------------------------------------------------CCCeEEEEECCCCcEEEEEecCCCCEEE
Confidence 771 1235777888 664 3444444 77889
Q ss_pred cccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCc-eE-EEeccCCCcccCCccccccccCccceeecc-CCCCc
Q 002194 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPST 413 (954)
Q Consensus 337 ~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~-~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp-Dg~~i 413 (954)
++|||||++|+..+.+ +.+.+|+++++ .. ..+..+. ..+..++|+| ||+.+
T Consensus 103 ~~~s~~~~~l~~~~~d-------------g~i~vw~~~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 103 IAVHPTKPYVLSGSDD-------------LTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EEECSSSSEEEEEETT-------------SEEEEEEGGGTSEEEEEEECCS-------------SCEEEEEEETTEEEEE
T ss_pred EEEeCCCCEEEEEcCC-------------CEEEEEECCCCceEEEEEcCCC-------------CcEEEEEEEcCCCCEE
Confidence 9999999999987733 38999999854 33 3333221 3356789999 77766
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-ccccCceeecc--CCceEEEEEeccccceEEEEEcCCC
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCD--DSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~sp--Dg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
+.. +..+.|.+|++ ..+.....+... ...+..++|+| ||..|+....+ ..|.+++..+
T Consensus 157 ~~~-------------~~dg~v~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----g~i~~~d~~~ 217 (814)
T 3mkq_A 157 ASG-------------CLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD----LTIKIWDYQT 217 (814)
T ss_dssp EEE-------------ETTSEEEEEET--TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT----SEEEEEETTT
T ss_pred EEE-------------eCCCeEEEEEC--CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC----CEEEEEECCC
Confidence 555 34568999996 233334444433 36678899999 89888877543 2466667766
Q ss_pred CCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEec
Q 002194 491 KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (954)
Q Consensus 491 ~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 569 (954)
+ ........+...+.. +.|+|+|++++.... ...|++||+.+++......
T Consensus 218 ~--~~~~~~~~~~~~v~~------~~~~~~~~~l~~~~~---------------------dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 218 K--SCVATLEGHMSNVSF------AVFHPTLPIIISGSE---------------------DGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp T--EEEEEEECCSSCEEE------EEECSSSSEEEEEET---------------------TSCEEEEETTTCSEEEEEC
T ss_pred C--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEeC---------------------CCeEEEEECCCCcEEEEee
Confidence 4 333333333333333 789999998887652 1248899998877655443
No 251
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.53 E-value=1.1e-13 Score=150.56 Aligned_cols=120 Identities=17% Similarity=0.035 Sum_probs=79.8
Q ss_pred EEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCC
Q 002194 641 LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT 720 (954)
Q Consensus 641 ~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~ 720 (954)
...+...+|.+++....-++ + .|.||++||++.... + ..+...+..+||.|++
T Consensus 16 ~~~~~~~~g~~l~~~~~g~~------~--g~~vvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~--- 68 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGNP------N--GKPAVFIHGGPGGGI------------S----PHHRQLFDPERYKVLL--- 68 (317)
T ss_dssp EEEEECSSSCEEEEEEEECT------T--SEEEEEECCTTTCCC------------C----GGGGGGSCTTTEEEEE---
T ss_pred eeEEEcCCCcEEEEEEcCCC------C--CCcEEEECCCCCccc------------c----hhhhhhccccCCeEEE---
Confidence 34466668888876555321 1 355889999742110 0 0011223357999999
Q ss_pred CCCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 721 TPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 721 ~~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
.|.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++.
T Consensus 69 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 69 FDQRGCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp ECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ECCCCCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 6777888875432 12345566665554443 3458999999999999999999999999999998754
No 252
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.53 E-value=8.4e-14 Score=154.06 Aligned_cols=180 Identities=14% Similarity=0.080 Sum_probs=118.1
Q ss_pred HHHHHHHHCCcEEEEcCCCCCCCCCCcccch---------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHH
Q 002194 703 TSVLLWLARGFAILGGPTTPIIGEGDEEAND---------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMT 773 (954)
Q Consensus 703 ~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a 773 (954)
.....|+++||.|+. .+.+|+|.+.... ......++|+.++++++.++ .+.+++.++|||+||.++
T Consensus 84 ~~~~~l~~~g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a 158 (354)
T 2rau_A 84 SIVLYLARNGFNVYT---IDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAA 158 (354)
T ss_dssp CHHHHHHHTTEEEEE---EECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHH
T ss_pred hHHHHHHhCCCEEEE---ecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHH
Confidence 356778889999999 4555677664321 12366788999999999876 344689999999999999
Q ss_pred HHHHHhC-CCcccEEEEeccCCCC--CCCCCC-----------------------Cc----------------c---ccc
Q 002194 774 ANLLAHA-PHLFCCGIARSGAYNR--TLTPFG-----------------------FQ----------------N---EDR 808 (954)
Q Consensus 774 ~~~a~~~-p~~~~a~v~~~~~~~~--~~~~~~-----------------------~~----------------~---~~~ 808 (954)
+.++.++ |++++++|++++.... ....+. +. . ...
T Consensus 159 ~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (354)
T 2rau_A 159 LNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSI 238 (354)
T ss_dssp HHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSH
T ss_pred HHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhH
Confidence 9999998 8999999999653211 000000 00 0 000
Q ss_pred hhhhcHHHH----------------------------------HhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHH
Q 002194 809 TLWEATSTY----------------------------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (954)
Q Consensus 809 ~~~~~~~~~----------------------------------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (954)
..|-....+ ...+....+.++++|+||+||++|.++| ..++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p---~~~~~l 315 (354)
T 2rau_A 239 SDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQI---FDSKIL 315 (354)
T ss_dssp HHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHH---BCGGGS
T ss_pred HHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCc---cchhhh
Confidence 000000000 0112233455889999999999998764 233222
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCC--CcccHHHHHHHHHHHHHHh
Q 002194 855 FNALKGHGALCRLVILPFESHGYA--ARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~--~~~~~~~~~~~i~~fl~~~ 897 (954)
....+++++|++||... ..+....+.+.+.+||+++
T Consensus 316 -------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 316 -------PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp -------CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred -------ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 23469999999999763 3345678899999999875
No 253
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.53 E-value=2.3e-12 Score=159.97 Aligned_cols=190 Identities=9% Similarity=0.024 Sum_probs=118.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCcccccccc--------ceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceee
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPE--------EKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~ 181 (954)
.+..++|||||++||....++...+++....+ ..+..+.+++ +......+.+..|.+|++.. + .....
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~-~--~~~~~ 94 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS-Q--KVLTT 94 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT-C--SEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC-C--cEEEE
Confidence 46689999999999998887555555443222 2345566676 33234444457899999954 2 12222
Q ss_pred eecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeeccc-------CCCccccccccceeEecC
Q 002194 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQ-------SPDIYLNAIFDNFVWVNN 254 (954)
Q Consensus 182 lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~-------~~~~~~~~~~~~~~wspD 254 (954)
+. ....+..+.|+|||++|+... ....|.++|+++++.....- .........+..++|+|+
T Consensus 95 ~~---~~~~V~~v~~sp~g~~l~sgs---------~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 95 VF---VPGKITSIDTDASLDWMLIGL---------QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp EE---CSSCEEEEECCTTCSEEEEEE---------TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred Ec---CCCCEEEEEECCCCCEEEEEc---------CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 32 224688899999999998854 25567888888876531110 000011223778999997
Q ss_pred C-eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCC
Q 002194 255 S-TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP 331 (954)
Q Consensus 255 G-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~ 331 (954)
+ ..|+... ....+ ++|+ +++.. .+...
T Consensus 163 ~~~~l~~g~-------------------------------------------------~dg~v-lWd~~~~~~~~~~~~~ 192 (902)
T 2oaj_A 163 DIGTVLISY-------------------------------------------------EYVTL-TYSLVENEIKQSFIYE 192 (902)
T ss_dssp EEEEEEEEC-------------------------------------------------SSCEE-EEETTTTEEEEEECCC
T ss_pred CCCEEEEEe-------------------------------------------------CCCcE-EEECCCCceEEEEecc
Confidence 5 5555441 12235 6666 55322 22111
Q ss_pred -------------------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE
Q 002194 332 -------------------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV 378 (954)
Q Consensus 332 -------------------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~ 378 (954)
..+..++|||||++|+..+.+ +.|.+||+..++.
T Consensus 193 ~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D-------------g~i~lWd~~~g~~ 245 (902)
T 2oaj_A 193 LPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED-------------NSLVFWDANSGHM 245 (902)
T ss_dssp BCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT-------------CCEEEEETTTCCE
T ss_pred cCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC-------------CeEEEEECCCCcE
Confidence 347789999999999988744 3899999986543
No 254
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.52 E-value=2.5e-13 Score=145.74 Aligned_cols=213 Identities=14% Similarity=0.146 Sum_probs=133.8
Q ss_pred cCCC-eEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCC
Q 002194 646 RKDG-VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (954)
Q Consensus 646 ~~~g-~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~ 724 (954)
..+| .+++....- +++.|.||++||....... . ..|. .....|++ .|.|++ .|.+
T Consensus 19 ~~~g~~~l~y~~~G--------~g~~~~vvllHG~~pg~~~---~-----~~w~----~~~~~L~~-~~~via---~Dl~ 74 (291)
T 2wue_A 19 DVDGPLKLHYHEAG--------VGNDQTVVLLHGGGPGAAS---W-----TNFS----RNIAVLAR-HFHVLA---VDQP 74 (291)
T ss_dssp ESSSEEEEEEEEEC--------TTCSSEEEEECCCCTTCCH---H-----HHTT----TTHHHHTT-TSEEEE---ECCT
T ss_pred EeCCcEEEEEEecC--------CCCCCcEEEECCCCCccch---H-----HHHH----HHHHHHHh-cCEEEE---ECCC
Confidence 3578 888766542 1224689999996210000 0 0111 12334544 599999 6777
Q ss_pred CCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCC--CC
Q 002194 725 GEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT--LT 799 (954)
Q Consensus 725 G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~--~~ 799 (954)
|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|++++..... ..
T Consensus 75 G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~ 148 (291)
T 2wue_A 75 GYGHSDKRAEHGQFNRYAAMALKGLFDQL------GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFA 148 (291)
T ss_dssp TSTTSCCCSCCSSHHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSS
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHh------CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccc
Confidence 888886542 23455566766666554 23589999999999999999999999999999998754211 00
Q ss_pred C--C-C------C---c--------------cccc---h----hhh---cHHHH---Hh-----cC-----cc--cccCC
Q 002194 800 P--F-G------F---Q--------------NEDR---T----LWE---ATSTY---VE-----MS-----PF--MSANK 828 (954)
Q Consensus 800 ~--~-~------~---~--------------~~~~---~----~~~---~~~~~---~~-----~s-----p~--~~~~~ 828 (954)
. . . + . .... . .+. .+..+ .. .+ .. ..+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (291)
T 2wue_A 149 PDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYR 228 (291)
T ss_dssp CSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGG
T ss_pred cccchhhHHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhh
Confidence 0 0 0 0 0 0000 0 000 00000 00 00 11 45667
Q ss_pred CCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 829 LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 829 ~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+++|+|+++|++|..+| +..++++.+.+. +.++++++++||... .+..+.+.+.|.+||.
T Consensus 229 i~~P~lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 229 LRQPVLLIWGREDRVNP--LDGALVALKTIP----RAQLHVFGQCGHWVQ-VEKFDEFNKLTIEFLG 288 (291)
T ss_dssp CCSCEEEEEETTCSSSC--GGGGHHHHHHST----TEEEEEESSCCSCHH-HHTHHHHHHHHHHHTT
T ss_pred CCCCeEEEecCCCCCCC--HHHHHHHHHHCC----CCeEEEeCCCCCChh-hhCHHHHHHHHHHHHh
Confidence 89999999999999998 888877766553 369999999999863 4556777778888874
No 255
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.52 E-value=9e-13 Score=145.74 Aligned_cols=238 Identities=12% Similarity=0.082 Sum_probs=160.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCC---CceeeeecCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL---GQEIEIQGFP 186 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~---~~~~~lt~~~ 186 (954)
.+..++|||||+.||....+ ..+.+|++..+... .....+..+
T Consensus 108 ~v~~~~~sp~g~~lasg~~d---------------------------------~~i~v~~~~~~~~~~~~~~~~~~~~h- 153 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLD---------------------------------NKCSVYPLTFDKNENMAAKKKSVAMH- 153 (354)
T ss_dssp CCCEEEECTTSSEEEEESTT---------------------------------SEEEEEECCCCTTCCSGGGCEEEEEC-
T ss_pred CEEEEEECCCCCEEEEeeCC---------------------------------CCEEEEEEeccccccccccceeeecc-
Confidence 56789999999999988775 46788887532111 112333332
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEec--CCeEEEEEecC
Q 002194 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN--NSTLLVCTIPL 264 (954)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp--DG~~l~~~~~~ 264 (954)
...+....|+||++.|+..+ ....|.++|+++++........... +..+.|+| +|+.|+...
T Consensus 154 -~~~v~~~~~~~~~~~l~t~s---------~D~~v~lwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~g~~l~sgs-- 217 (354)
T 2pbi_B 154 -TNYLSACSFTNSDMQILTAS---------GDGTCALWDVESGQLLQSFHGHGAD----VLCLDLAPSETGNTFVSGG-- 217 (354)
T ss_dssp -SSCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTCCEEEEEECCSSC----EEEEEECCCSSCCEEEEEE--
T ss_pred -CCcEEEEEEeCCCCEEEEEe---------CCCcEEEEeCCCCeEEEEEcCCCCC----eEEEEEEeCCCCCEEEEEe--
Confidence 24688899999999988765 2567888899888765544333322 55677776 577777651
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCC-ccccccccCC
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSP 341 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~-~~~~~~~~Sp 341 (954)
....|.++|+ +|+.. .+... ..+..++|+|
T Consensus 218 -----------------------------------------------~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p 250 (354)
T 2pbi_B 218 -----------------------------------------------CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP 250 (354)
T ss_dssp -----------------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred -----------------------------------------------CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC
Confidence 1234777788 66543 34333 6788999999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~ 421 (954)
||+.|+..+.+ +.+.+||+.......+..... ...++..+.|+|||+.++..
T Consensus 251 ~~~~l~s~s~D-------------~~v~lwd~~~~~~~~~~~~~~----------~~~~~~~~~~s~~g~~l~~g----- 302 (354)
T 2pbi_B 251 SGDAFASGSDD-------------ATCRLYDLRADREVAIYSKES----------IIFGASSVDFSLSGRLLFAG----- 302 (354)
T ss_dssp TSSEEEEEETT-------------SCEEEEETTTTEEEEEECCTT----------CCSCEEEEEECTTSSEEEEE-----
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCCC----------cccceeEEEEeCCCCEEEEE-----
Confidence 99999888743 389999998654333222110 11234678999999966554
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEE
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTW 484 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~ 484 (954)
+..+.|.+|++ .++.....+..+...+..++|||||+.|+..+.++. .+||
T Consensus 303 --------~~d~~i~vwd~--~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~--v~vW 353 (354)
T 2pbi_B 303 --------YNDYTINVWDV--LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT--LRVW 353 (354)
T ss_dssp --------ETTSCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSE--EEEE
T ss_pred --------ECCCcEEEEEC--CCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCC--EEec
Confidence 33557899996 344444556667778889999999999998876543 5555
No 256
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.52 E-value=5.6e-13 Score=142.24 Aligned_cols=211 Identities=12% Similarity=0.116 Sum_probs=134.5
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++.... + + .|.||++||...... .+..|.. ....| +++|.|++ .|..|+
T Consensus 12 ~~g~~l~y~~~---G-----~--g~~vvllHG~~~~~~-----------~~~~w~~-~~~~L-~~~~~vi~---~Dl~G~ 65 (282)
T 1iup_A 12 AAGVLTNYHDV---G-----E--GQPVILIHGSGPGVS-----------AYANWRL-TIPAL-SKFYRVIA---PDMVGF 65 (282)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCCTTCC-----------HHHHHTT-THHHH-TTTSEEEE---ECCTTS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCcc-----------HHHHHHH-HHHhh-ccCCEEEE---ECCCCC
Confidence 46877776543 1 1 356999999421100 0001111 12233 68999999 677788
Q ss_pred CCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC---
Q 002194 727 GDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--- 800 (954)
Q Consensus 727 G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--- 800 (954)
|.+.... .......+|+.+.++.+ +.+++.|+||||||.+|+.+|.++|++++++|++++........
T Consensus 66 G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 139 (282)
T 1iup_A 66 GFTDRPENYNYSKDSWVDHIIGIMDAL------EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGL 139 (282)
T ss_dssp TTSCCCTTCCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHH
Confidence 8876542 22455666666666553 33589999999999999999999999999999998754211000
Q ss_pred ---CCCc---------------cc---cch----hhh---c---HHHHHhc-------------CcccccCCCCCCEEEE
Q 002194 801 ---FGFQ---------------NE---DRT----LWE---A---TSTYVEM-------------SPFMSANKLKKPILLV 836 (954)
Q Consensus 801 ---~~~~---------------~~---~~~----~~~---~---~~~~~~~-------------sp~~~~~~~~~P~Lii 836 (954)
+.+. .. ... .+. . ...+... .+...+.++++|+|++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 219 (282)
T 1iup_A 140 NAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLII 219 (282)
T ss_dssp HHHHTCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEE
T ss_pred HHHhcCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEE
Confidence 0000 00 000 000 0 0001000 0113567889999999
Q ss_pred EeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
+|++|..+| ++.++++.+.+. +.++++++++||... .+..+.+.+.+.+||++
T Consensus 220 ~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 220 HGREDQVVP--LSSSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp EETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHT
T ss_pred ecCCCCCCC--HHHHHHHHHhCC----CCeEEEECCCCCCcc-ccCHHHHHHHHHHHHhc
Confidence 999999998 888887776653 369999999999863 56677888889999976
No 257
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.52 E-value=1.1e-12 Score=147.39 Aligned_cols=243 Identities=12% Similarity=-0.007 Sum_probs=147.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCC----CCceeeeecC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK----LGQEIEIQGF 185 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~----~~~~~~lt~~ 185 (954)
.+..++|+| +.|+..+.+ +.|++|++.. +. ......+..
T Consensus 18 ~i~~~~~~~--~~l~s~~~d---------------------------------g~i~iw~~~~-~~~~~~~~~~~~~~~- 60 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSGD---------------------------------GYLKVWDNKL-LDNENPKDKSYSHFV- 60 (397)
T ss_dssp CEEEEEECS--SEEEEEETT---------------------------------SEEEEEESBC-CTTCCGGGGEEEEEC-
T ss_pred CeEEEEecC--CeEEEEcCC---------------------------------CEEEEEECCC-cccccCCCcceEEec-
Confidence 456788988 677777665 5799999964 21 001334433
Q ss_pred CCCCcccceeecCC----C---CeEEEEEeeccccCCCCceEEEEEECCCCc------eeecccCCCccccccccceeEe
Q 002194 186 PDGAKLNFVTWSQD----G---KHLAFSIRIDAEDSSSSKLRVWVADVDTGK------ARPLFQSPDIYLNAIFDNFVWV 252 (954)
Q Consensus 186 ~~~~~~~~~~wSPD----G---~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~------~~~lt~~~~~~~~~~~~~~~ws 252 (954)
+...+..+.|+|| | +.|+... . ...|+++++++++ ...+.......-...+..+.|+
T Consensus 61 -h~~~v~~~~~~~~~~~~g~~~~~l~s~~-------~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 61 -HKSGLHHVDVLQAIERDAFELCLVATTS-------F--SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp -CTTCEEEEEEEEEEETTTEEEEEEEEEE-------T--TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred -CCCcEEEEEEecccccCCccccEEEEEc-------C--CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEe
Confidence 2346889999999 9 8888755 2 3456666666665 4444433200001126789999
Q ss_pred ----cCCeE-EEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C----
Q 002194 253 ----NNSTL-LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---- 322 (954)
Q Consensus 253 ----pDG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~---- 322 (954)
|||+. |+... ....|.++++ +
T Consensus 131 ~~~~~~~~~~l~~~~-------------------------------------------------~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 131 ASNDRLLSHRLVATD-------------------------------------------------VKGTTYIWKFHPFADE 161 (397)
T ss_dssp CCC----CEEEEEEE-------------------------------------------------TTSCEEEEEEESSSSH
T ss_pred eccCCCCceEEEEEe-------------------------------------------------CCCcEEEEeCCccccc
Confidence 99998 77651 1123555555 4
Q ss_pred --Cc-ee-----Ec-------CC-CccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEecc--
Q 002194 323 --GT-VK-----EI-------GP-PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCD-- 383 (954)
Q Consensus 323 --G~-~~-----~l-------~~-~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~-- 383 (954)
+. .. .+ .. ...+..++|+||| .|+..+.+ +.+.+||+..++. ..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~ 227 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-------------GTVQISELSTLRPLYNFESQH 227 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-------------SEEEEEETTTTEEEEEEECCC
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-------------CcEEEEECCCCceeEEEeccc
Confidence 32 22 33 11 2667889999999 76666532 3899999986543 33332
Q ss_pred -CCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCC---CeEEEEecCCCCCCCceEEee------
Q 002194 384 -LPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR---DIIYTQQAEPVQGEGPEILHK------ 453 (954)
Q Consensus 384 -~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~g~~~~~l~~------ 453 (954)
+... ...+..++|+|||+.++.. +.. +.|.+|++ .++.....+..
T Consensus 228 ~h~~~----------~~~i~~i~~~~~~~~l~~~-------------~~d~~~g~i~i~d~--~~~~~~~~~~~~~~~~~ 282 (397)
T 1sq9_A 228 SMINN----------SNSIRSVKFSPQGSLLAIA-------------HDSNSFGCITLYET--EFGERIGSLSVPTHSSQ 282 (397)
T ss_dssp ---CC----------CCCEEEEEECSSTTEEEEE-------------EEETTEEEEEEEET--TTCCEEEEECBC-----
T ss_pred ccccc----------CCccceEEECCCCCEEEEE-------------ecCCCCceEEEEEC--CCCcccceeccCccccc
Confidence 1000 1345689999999876655 223 58999996 23333344444
Q ss_pred -------cccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 454 -------LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 454 -------~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+...+..++|+|||+.|+..+.++ .|.++++.++
T Consensus 283 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~ 323 (397)
T 1sq9_A 283 ASLGEFAHSSWVMSLSFNDSGETLCSAGWDG----KLRFWDVKTK 323 (397)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTT
T ss_pred ccccccccCCcEEEEEECCCCCEEEEEeCCC----eEEEEEcCCC
Confidence 566778899999999988876433 4666677664
No 258
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.52 E-value=3.1e-13 Score=147.70 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=83.9
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (954)
..+|.+++...+- + .|.||++||.+... ..| ...+..|+++||.|++ .|.+|
T Consensus 17 ~~~g~~l~y~~~G--------~--g~~vvllHG~~~~~-----------~~w----~~~~~~L~~~g~~via---~Dl~G 68 (328)
T 2cjp_A 17 AVNGLNMHLAELG--------E--GPTILFIHGFPELW-----------YSW----RHQMVYLAERGYRAVA---PDLRG 68 (328)
T ss_dssp EETTEEEEEEEEC--------S--SSEEEEECCTTCCG-----------GGG----HHHHHHHHTTTCEEEE---ECCTT
T ss_pred cCCCcEEEEEEcC--------C--CCEEEEECCCCCch-----------HHH----HHHHHHHHHCCcEEEE---ECCCC
Confidence 3578888766541 1 36899999964211 111 1345567778999999 67778
Q ss_pred CCCcccc------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 726 EGDEEAN------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 726 ~G~~~~~------~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
+|.+..+ ........+|+.+.++.+.. +.+++.|+||||||.+|+.+|.++|++++++|++++.
T Consensus 69 ~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 69 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp STTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCCcCcCCcccccHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 8887543 12356677888888777621 2468999999999999999999999999999998754
No 259
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.52 E-value=1.1e-13 Score=153.30 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=85.2
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++...+-|++ + ..|+||++||.+... ..|. .....|+++||.|++ .+..|+
T Consensus 10 ~~g~~l~y~~~G~~~----~--~~~~vv~~hG~~~~~-----------~~~~----~~~~~l~~~g~~vi~---~d~~g~ 65 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD----Q--QGPLVVLLHGFPESW-----------YSWR----HQIPALAGAGYRVVA---IDQRGY 65 (356)
T ss_dssp ETTEEEEEEEECCTT----C--CSCEEEEECCTTCCG-----------GGGT----TTHHHHHHTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEEecCCC----C--CCCEEEEECCCCCcH-----------HHHH----HHHHHHHHcCCEEEE---EcCCCC
Confidence 578899888876542 1 257899999964211 1121 235677889999999 555677
Q ss_pred CCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCC
Q 002194 727 GDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (954)
Q Consensus 727 G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (954)
|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++..
T Consensus 66 g~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 66 GRSSKYRVQKAYRIKELVGDVVGVLDSY------GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp TTSCCCCSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHc------CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 7765432 23455666776666654 44689999999999999999999999999999988654
No 260
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.51 E-value=8.6e-14 Score=139.08 Aligned_cols=183 Identities=13% Similarity=-0.063 Sum_probs=114.4
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (954)
.|+||++||..... . ..+.......|+++||.|+.++++.+ + .+ ......+|+.+.++.
T Consensus 4 ~p~vv~~HG~~~~~-----------~--~~~~~~~~~~l~~~g~~v~~~d~~~~---~---~~--~~~~~~~~~~~~~~~ 62 (192)
T 1uxo_A 4 TKQVYIIHGYRASS-----------T--NHWFPWLKKRLLADGVQADILNMPNP---L---QP--RLEDWLDTLSLYQHT 62 (192)
T ss_dssp CCEEEEECCTTCCT-----------T--STTHHHHHHHHHHTTCEEEEECCSCT---T---SC--CHHHHHHHHHTTGGG
T ss_pred CCEEEEEcCCCCCc-----------c--hhHHHHHHHHHHhCCcEEEEecCCCC---C---CC--CHHHHHHHHHHHHHh
Confidence 58899999964211 1 01122223457789999999776511 1 11 123334443333322
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC--cccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccC
Q 002194 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH--LFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSAN 827 (954)
Q Consensus 750 l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~--~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 827 (954)
. .+++.++||||||.+++.++.++|+ +++++|+++|....... +. ........+ .....+.
T Consensus 63 ------~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~---~~-~~~~~~~~~------~~~~~~~ 125 (192)
T 1uxo_A 63 ------L-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT---LQ-MLDEFTQGS------FDHQKII 125 (192)
T ss_dssp ------C-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT---CG-GGGGGTCSC------CCHHHHH
T ss_pred ------c-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc---ch-hhhhhhhcC------CCHHHHH
Confidence 2 4689999999999999999999998 99999999986542110 00 000000000 0012234
Q ss_pred CCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 828 KLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 828 ~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
++++|+|++||++|..+| .+.++++.+.+ +.+++++++++|.+.... . ..+.++.+||.+++.
T Consensus 126 ~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~-~-~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 126 ESAKHRAVIASKDDQIVP--FSFSKDLAQQI-----DAALYEVQHGGHFLEDEG-F-TSLPIVYDVLTSYFS 188 (192)
T ss_dssp HHEEEEEEEEETTCSSSC--HHHHHHHHHHT-----TCEEEEETTCTTSCGGGT-C-SCCHHHHHHHHHHHH
T ss_pred hhcCCEEEEecCCCCcCC--HHHHHHHHHhc-----CceEEEeCCCcCcccccc-c-ccHHHHHHHHHHHHH
Confidence 456899999999999998 88888888877 248899999999874221 1 112345677766664
No 261
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.51 E-value=2.1e-13 Score=147.89 Aligned_cols=121 Identities=14% Similarity=-0.005 Sum_probs=81.0
Q ss_pred EEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcC
Q 002194 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (954)
Q Consensus 640 ~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (954)
+...+...+|.+++...+-++ + .|.||++||++.... + ..+...|..+||.|++
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~------~--g~pvvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~-- 65 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNP------H--GKPVVMLHGGPGGGC------------N----DKMRRFHDPAKYRIVL-- 65 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECT------T--SEEEEEECSTTTTCC------------C----GGGGGGSCTTTEEEEE--
T ss_pred ccceEEcCCCCEEEEEecCCC------C--CCeEEEECCCCCccc------------c----HHHHHhcCcCcceEEE--
Confidence 344456568888876655321 1 356889999642110 0 0011223357999999
Q ss_pred CCCCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 720 TTPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 720 ~~~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
.|.+|+|.+.... .......+|+.+.++.+ ..+++.|+||||||.+++.++.++|++++++|++++.
T Consensus 66 -~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 66 -FDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL------GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp -ECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -ECCCCCcCCCCCcccccccHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 6777888885432 22445566666655543 2358999999999999999999999999999998764
No 262
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.51 E-value=1.5e-13 Score=145.83 Aligned_cols=196 Identities=12% Similarity=0.158 Sum_probs=127.0
Q ss_pred cEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch------hhHHHHHHHHH
Q 002194 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND------RFVEQLVACAE 744 (954)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~------~~~~~~~~D~~ 744 (954)
|.||++||...... .|.. ....| +++|.|++ .|.+|+|.+.... .......+|+.
T Consensus 21 ~~vvllHG~~~~~~-----------~w~~----~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~ 81 (271)
T 1wom_A 21 ASIMFAPGFGCDQS-----------VWNA----VAPAF-EEDHRVIL---FDYVGSGHSDLRAYDLNRYQTLDGYAQDVL 81 (271)
T ss_dssp SEEEEECCTTCCGG-----------GGTT----TGGGG-TTTSEEEE---CCCSCCSSSCCTTCCTTGGGSHHHHHHHHH
T ss_pred CcEEEEcCCCCchh-----------hHHH----HHHHH-HhcCeEEE---ECCCCCCCCCCCcccccccccHHHHHHHHH
Confidence 78999999632211 1211 12234 34799999 7778888875421 12455667777
Q ss_pred HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC--C--CCccc-----------cch
Q 002194 745 AAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--F--GFQNE-----------DRT 809 (954)
Q Consensus 745 ~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--~--~~~~~-----------~~~ 809 (954)
+.++.+ +.+++.++||||||.+++.++.++|++++++|++++........ + .+... ...
T Consensus 82 ~~l~~l------~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T 1wom_A 82 DVCEAL------DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYI 155 (271)
T ss_dssp HHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHc------CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHH
Confidence 766554 34689999999999999999999999999999998642110000 0 00000 000
Q ss_pred hhh------------c---HH----HHHh---------------cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHH
Q 002194 810 LWE------------A---TS----TYVE---------------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (954)
Q Consensus 810 ~~~------------~---~~----~~~~---------------~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~ 855 (954)
.|. . .+ .+.. .+....+.++++|+|+++|++|..+| ...++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--~~~~~~~~ 233 (271)
T 1wom_A 156 GWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAP--ATVGKYMH 233 (271)
T ss_dssp HHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSC--HHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCC--HHHHHHHH
Confidence 000 0 00 0000 11223456789999999999999998 77777776
Q ss_pred HHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 856 NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 856 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
+.+. ..++++++++||... .+..+.+.+.|.+||++++
T Consensus 234 ~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 234 QHLP----YSSLKQMEARGHCPH-MSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp HHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHCC----CCEEEEeCCCCcCcc-ccCHHHHHHHHHHHHHhcC
Confidence 6543 369999999999863 5667788899999998763
No 263
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.51 E-value=1.1e-13 Score=148.66 Aligned_cols=210 Identities=14% Similarity=0.085 Sum_probs=132.1
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++...+-+++ .|+||++||++.... .|. .....| ++||.|++ .+.+|+
T Consensus 17 ~~g~~l~~~~~g~~~--------~~~vl~lHG~~~~~~-----------~~~----~~~~~l-~~~~~v~~---~d~~G~ 69 (299)
T 3g9x_A 17 VLGERMHYVDVGPRD--------GTPVLFLHGNPTSSY-----------LWR----NIIPHV-APSHRCIA---PDLIGM 69 (299)
T ss_dssp ETTEEEEEEEESCSS--------SCCEEEECCTTCCGG-----------GGT----TTHHHH-TTTSCEEE---ECCTTS
T ss_pred eCCeEEEEEecCCCC--------CCEEEEECCCCccHH-----------HHH----HHHHHH-ccCCEEEe---eCCCCC
Confidence 478888877764321 467999999742211 121 123344 57999999 566778
Q ss_pred CCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC-CC-
Q 002194 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FG- 802 (954)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~~- 802 (954)
|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++........ +.
T Consensus 70 G~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 143 (299)
T 3g9x_A 70 GKSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPE 143 (299)
T ss_dssp TTSCCCCCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCG
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHh------CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcch
Confidence 8775432 33455666666666654 44689999999999999999999999999999998543321000 00
Q ss_pred -C-------ccc---------cchh--------------hhcH-----------------HHHHhc--------------
Q 002194 803 -F-------QNE---------DRTL--------------WEAT-----------------STYVEM-------------- 820 (954)
Q Consensus 803 -~-------~~~---------~~~~--------------~~~~-----------------~~~~~~-------------- 820 (954)
. ... .... .+.. ..+...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (299)
T 3g9x_A 144 FARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVE 223 (299)
T ss_dssp GGHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred HHHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhh
Confidence 0 000 0000 0000 000000
Q ss_pred CcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 821 SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 821 sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
+....+.++++|+|+++|++|..+| .+.++++.+.+. .+++++++++||... .+..+.+.+.|.+++.+
T Consensus 224 ~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 224 AYMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPA 292 (299)
T ss_dssp HHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHSGG
T ss_pred hhhhhcccCCCCeEEEecCCCCCCC--HHHHHHHHhhCC----CCeEEEeCCCCCcch-hcCHHHHHHHHHHHHhh
Confidence 0111245678999999999999998 888888877663 368999999999863 45555565555555443
No 264
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.50 E-value=5.4e-12 Score=138.11 Aligned_cols=283 Identities=12% Similarity=0.057 Sum_probs=167.7
Q ss_pred CCCCceecCC-CCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCC--ceeeeecCC
Q 002194 110 PLPALSFSPQ-RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLG--QEIEIQGFP 186 (954)
Q Consensus 110 ~~~~~~~SPD-G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~--~~~~lt~~~ 186 (954)
.+..++|||| |+.||..+.+ ..|.||++....... ..+.+.+
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D---------------------------------~~i~vWd~~~~~~~~~~~~~~l~~-- 84 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRD---------------------------------KTIIMWKLTRDETNYGIPQRALRG-- 84 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETT---------------------------------SCEEEEEECCSSSCSEEEEEEECC--
T ss_pred CEEEEEEeCCCCCEEEEEcCC---------------------------------CeEEEEECCCCCcccceeeEEEeC--
Confidence 5678999998 5788877775 579999986422111 1122322
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
+...+....|+|||+.|+.... ...|.+++...+............ .....++++++.|+...
T Consensus 85 h~~~V~~~~~s~dg~~l~s~~~---------d~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~s~s---- 147 (340)
T 4aow_A 85 HSHFVSDVVISSDGQFALSGSW---------DGTLRLWDLTTGTTTRRFVGHTKD----VLSVAFSSDNRQIVSGS---- 147 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEE----
T ss_pred CCCCEEEEEECCCCCEEEEEcc---------cccceEEeecccceeeeecCCCCc----eeEEEEeecCccceeec----
Confidence 2246889999999999887542 456778887776554443333221 44677889999888651
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEc--CCC-ccccccccCCC
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEI--GPP-AVYTSLDPSPD 342 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l--~~~-~~~~~~~~SpD 342 (954)
. ...+.++++ ....... ... ..+....|+++
T Consensus 148 -----------------~----------------------------d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 148 -----------------R----------------------------DKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp -----------------T----------------------------TSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred -----------------C----------------------------CCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 1 122445555 3222222 112 55667788888
Q ss_pred CcEEEEEeecCCcccccccCCCCcceEEEeccCceEEE-eccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002194 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 343 Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~-l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~ 421 (954)
+...++.+... +..+.+||+..++... +..+ ...+..++|+|||+.++..
T Consensus 183 ~~~~~~~s~~~-----------d~~i~i~d~~~~~~~~~~~~h-------------~~~v~~~~~s~~~~~l~s~----- 233 (340)
T 4aow_A 183 SSNPIIVSCGW-----------DKLVKVWNLANCKLKTNHIGH-------------TGYLNTVTVSPDGSLCASG----- 233 (340)
T ss_dssp SSSCEEEEEET-----------TSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTSSEEEEE-----
T ss_pred CCCcEEEEEcC-----------CCEEEEEECCCCceeeEecCC-------------CCcEEEEEECCCCCEEEEE-----
Confidence 75543332111 2379999998765433 3222 1345679999999866554
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec-
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD- 500 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~- 500 (954)
+..+.|.+|++ ...+..........+..+.|+|++..++.. .++ .|.++++.++ .......
T Consensus 234 --------s~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~d~----~i~iwd~~~~--~~~~~~~~ 295 (340)
T 4aow_A 234 --------GKDGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAA-TGP----SIKIWDLEGK--IIVDELKQ 295 (340)
T ss_dssp --------ETTCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEE-ETT----EEEEEETTTT--EEEEEECC
T ss_pred --------eCCCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeecc-CCC----EEEEEECCCC--eEEEeccc
Confidence 34568899996 433333333344556788999998766544 222 3555566553 1111111
Q ss_pred --------CCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCC
Q 002194 501 --------RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (954)
Q Consensus 501 --------~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 563 (954)
.....+.. ++|+|||++|+.... ...|++||+++|+
T Consensus 296 ~~~~~~~~~h~~~v~~------l~~s~dg~~l~sgs~---------------------Dg~v~iW~~~tGt 339 (340)
T 4aow_A 296 EVISTSSKAEPPQCTS------LAWSADGQTLFAGYT---------------------DNLVRVWQVTIGT 339 (340)
T ss_dssp C-------CCCCCEEE------EEECTTSSEEEEEET---------------------TSCEEEEEEEC--
T ss_pred cceeeeccCCCCCEEE------EEECCCCCEEEEEeC---------------------CCEEEEEeCCCcC
Confidence 11112222 789999999887652 2249999999886
No 265
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.50 E-value=6.2e-14 Score=153.46 Aligned_cols=205 Identities=15% Similarity=0.112 Sum_probs=129.4
Q ss_pred CeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCC
Q 002194 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGD 728 (954)
Q Consensus 649 g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~ 728 (954)
+.++....+-+. .|+||++||.+... ..+...+...||.|++ .+..|+|.
T Consensus 69 ~~~~~~~~~g~~---------~~~vv~~hG~~~~~------------------~~~~~~~~~lg~~Vi~---~D~~G~G~ 118 (330)
T 3p2m_A 69 AGAISALRWGGS---------APRVIFLHGGGQNA------------------HTWDTVIVGLGEPALA---VDLPGHGH 118 (330)
T ss_dssp ETTEEEEEESSS---------CCSEEEECCTTCCG------------------GGGHHHHHHSCCCEEE---ECCTTSTT
T ss_pred CceEEEEEeCCC---------CCeEEEECCCCCcc------------------chHHHHHHHcCCeEEE---EcCCCCCC
Confidence 444666665321 46799999964211 0123334455999999 56667787
Q ss_pred cccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC---------
Q 002194 729 EEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR--------- 796 (954)
Q Consensus 729 ~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~--------- 796 (954)
+... ........+|+.++++.+ +.+++.|+|||+||.+++.++.++|++++++|++++....
T Consensus 119 S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 192 (330)
T 3p2m_A 119 SAWREDGNYSPQLNSETLAPVLREL------APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTA 192 (330)
T ss_dssp SCCCSSCBCCHHHHHHHHHHHHHHS------STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhh
Confidence 7532 223455566666666554 3468999999999999999999999999999999864210
Q ss_pred C---CC-----CCCCccccc--------hhhhcHHHHH----hc-------------C----------cccccCCCCCCE
Q 002194 797 T---LT-----PFGFQNEDR--------TLWEATSTYV----EM-------------S----------PFMSANKLKKPI 833 (954)
Q Consensus 797 ~---~~-----~~~~~~~~~--------~~~~~~~~~~----~~-------------s----------p~~~~~~~~~P~ 833 (954)
. .. ...+..... ........+. .. . ....+.++++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 272 (330)
T 3p2m_A 193 EQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPI 272 (330)
T ss_dssp C-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCE
T ss_pred hhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCE
Confidence 0 00 000000000 0000000000 00 0 012345678999
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEE-EEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCR-LVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 834 Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
|+++|++|..+| .+.++++.+.+. ..+ +++++++||... .+..+.+.+.|.+||++
T Consensus 273 Lii~G~~D~~v~--~~~~~~l~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 273 TLVRGGSSGFVT--DQDTAELHRRAT----HFRGVHIVEKSGHSVQ-SDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEEETTCCSCHH-HHCHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhCC----CCeeEEEeCCCCCCcc-hhCHHHHHHHHHHHHhc
Confidence 999999999998 888888777653 246 999999999873 55667777888888753
No 266
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.50 E-value=3.3e-12 Score=140.42 Aligned_cols=306 Identities=10% Similarity=-0.007 Sum_probs=163.8
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCccc
Q 002194 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (954)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~ 192 (954)
.++++++++.++....+ ..|++|++.+ ++..............
T Consensus 4 g~~~~~~~~~~v~~~~~---------------------------------~~v~~~d~~~----~~~~~~~~~~~~~~~~ 46 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYP---------------------------------NNLHVVDVAS----DTVYKSCVMPDKFGPG 46 (349)
T ss_dssp CCCCCTTCEEEEEEETT---------------------------------TEEEEEETTT----TEEEEEEECSSCCSSC
T ss_pred cccccCCCEEEEEeCCC---------------------------------CeEEEEECCC----CcEEEEEecCCCCCCc
Confidence 56788988877766654 4799999854 3332221122211467
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCc--cccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
.++|||||+.++++.. +...|+++|+++++.......+.. .....+..++|+|||+.|+++.......
T Consensus 47 ~~~~s~dg~~~~v~~~--------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~-- 116 (349)
T 1jmx_B 47 TAMMAPDNRTAYVLNN--------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL-- 116 (349)
T ss_dssp EEEECTTSSEEEEEET--------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEEC--
T ss_pred eeEECCCCCEEEEEeC--------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccc--
Confidence 8899999998777542 356899999998876544332210 0001145789999999999872110000
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeE----cCCCccccccccCCCCcE
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE----IGPPAVYTSLDPSPDEKY 345 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~----l~~~~~~~~~~~SpDGk~ 345 (954)
....+ .....|+++|+ +|+... ...+..+..++|||||+
T Consensus 117 -----------------------------~~~~~------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 117 -----------------------------NDHYV------VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS- 160 (349)
T ss_dssp -----------------------------SSCEE------ECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-
T ss_pred -----------------------------ccccc------cCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-
Confidence 00000 01356889998 654322 22224456777999999
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCceEEE-eccCCCccc---CC----ccccccc----cCccceeeccCCCCc
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAED---IP----IAFNSVR----KGMRSINWRSDKPST 413 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~-l~~~~~~~~---~p----~~~~~~~----~g~~~~~wspDg~~i 413 (954)
|++.+ .++++||+++++... +........ .+ .+..... .....+.+++|++..
T Consensus 161 l~~~~---------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 225 (349)
T 1jmx_B 161 LYVAG---------------PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD 225 (349)
T ss_dssp EEEES---------------SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC------
T ss_pred EEEcc---------------CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCC
Confidence 55432 168999998665433 322110000 00 0000000 001113333333211
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe--ecccccCceeecc-CCceEEEEEeccccceEEEEEcCCC
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCD-DSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
... ......++.++. .+++.+.+. ........++||| ||+.|+.. . ..|+++|+.+
T Consensus 226 ~~~------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~---~~v~~~d~~~ 284 (349)
T 1jmx_B 226 PAT------------ADLLYGYLSVDL---KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---L---NRLAKYDLKQ 284 (349)
T ss_dssp -CC------------CEEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---E---SEEEEEETTT
T ss_pred ccc------------cccceeEEEEec---cCCcEEecccccCCCcceeeEecCCCCCEEEEE---c---CeEEEEECcc
Confidence 000 011123344664 445554442 2233456789999 99988776 2 4689999887
Q ss_pred CCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEE
Q 002194 491 KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (954)
Q Consensus 491 ~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 567 (954)
+ +........ ..... ++|+|||++|+.... ...|++||+++++....
T Consensus 285 ~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~---------------------~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 285 R--KLIKAANLD-HTYYC------VAFDKKGDKLYLGGT---------------------FNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp T--EEEEEEECS-SCCCE------EEECSSSSCEEEESB---------------------SSEEEEEETTTTEEEEE
T ss_pred C--eEEEEEcCC-CCccc------eEECCCCCEEEEecC---------------------CCeEEEEeccccceeee
Confidence 5 322222211 11122 789999998877421 13599999988875433
No 267
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.50 E-value=9.3e-13 Score=148.85 Aligned_cols=297 Identities=8% Similarity=0.118 Sum_probs=172.8
Q ss_pred cccceeecCCCCeEEEEEeecc--ccCCCCceEEEEEECCCCcee---ecccCCCccccccccceeEecCCeEEEEEecC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDA--EDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~--~~~~~~~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (954)
.+..++|||||+.++++..... .........|.++++++++.. ....... .+..++|+|||++|+...
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~-- 86 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDS-----KFNDLDWSHNNKIIAGAL-- 86 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSS-----CEEEEEECSSSSCEEEEE--
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCC-----ceEEEEECCCCCeEEEEc--
Confidence 4677899999985555542110 000033556778888776532 2222222 277899999999998761
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C---C--ceeEcCCC-cccccc
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---G--TVKEIGPP-AVYTSL 337 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~---G--~~~~l~~~-~~~~~~ 337 (954)
....|.++++ + + ....+... ..+..+
T Consensus 87 -----------------------------------------------~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 119 (416)
T 2pm9_A 87 -----------------------------------------------DNGSLELYSTNEANNAINSMARFSNHSSSVKTV 119 (416)
T ss_dssp -----------------------------------------------SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEE
T ss_pred -----------------------------------------------cCCeEEEeecccccccccchhhccCCccceEEE
Confidence 1123556666 3 2 33444444 778899
Q ss_pred ccCCC-CcEEEEEeecCCcccccccCCCCcceEEEeccCceE-------EEeccCCCcccCCccccccccCccceeeccC
Q 002194 338 DPSPD-EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-------RELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (954)
Q Consensus 338 ~~SpD-Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-------~~l~~~~~~~~~p~~~~~~~~g~~~~~wspD 409 (954)
+|+|| ++.|+..+.+ +.|.+||+.+++. ..+.. .......+..++|+||
T Consensus 120 ~~~~~~~~~l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~----------~~~~~~~v~~~~~~~~ 176 (416)
T 2pm9_A 120 KFNAKQDNVLASGGNN-------------GEIFIWDMNKCTESPSNYTPLTPGQ----------SMSSVDEVISLAWNQS 176 (416)
T ss_dssp EECSSSTTBEEEECSS-------------SCEEBCBTTTTSSCTTTCCCBCCCC----------SCCSSCCCCEEEECSS
T ss_pred EEcCCCCCEEEEEcCC-------------CeEEEEECCCCcccccccccccccc----------ccCCCCCeeEEEeCCC
Confidence 99999 7777766633 3899999986541 11100 1122245678999999
Q ss_pred CCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEeec------ccccCceeeccCCceEEEEEeccccceE
Q 002194 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKL------DLRYGGISWCDDSLALVYESWYKTRRTR 482 (954)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~------~~~~~~~~~spDg~~l~~~~~~~~~~~~ 482 (954)
+..+++.. +..+.|.+|++ ..++. ..+... ...+..++|+|+|..+++....++....
T Consensus 177 ~~~~l~~~------------~~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 177 LAHVFASA------------GSSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CTTEEEEE------------SSSSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCcEEEEE------------cCCCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 65554441 33557899996 43333 333322 4567789999998655444443321124
Q ss_pred EEEEcCCCCCCCcEEEec-CCCCCccCCCCCCCeeecc-CCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECC
Q 002194 483 TWVISPGSKDVAPRILFD-RSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN 560 (954)
Q Consensus 483 l~~~d~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 560 (954)
|.++|+.++. .+..... .+...+.. +.|+| +|++++.... ...|++||+.
T Consensus 242 i~~~d~~~~~-~~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~~---------------------dg~v~~wd~~ 293 (416)
T 2pm9_A 242 ILIWDLRNAN-TPLQTLNQGHQKGILS------LDWCHQDEHLLLSSGR---------------------DNTVLLWNPE 293 (416)
T ss_dssp CCEEETTSTT-SCSBCCCSCCSSCEEE------EEECSSCSSCEEEEES---------------------SSEEEEECSS
T ss_pred EEEEeCCCCC-CCcEEeecCccCceeE------EEeCCCCCCeEEEEeC---------------------CCCEEEeeCC
Confidence 5556665531 2222222 23333333 78999 8888887762 2359999999
Q ss_pred CCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCc
Q 002194 561 TGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (954)
Q Consensus 561 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~ 620 (954)
+++.......... .+ ...+|+||+..++++... -..+.+|++.+++
T Consensus 294 ~~~~~~~~~~~~~----~v-------~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 294 SAEQLSQFPARGN----WC-------FKTKFAPEAPDLFACASF---DNKIEVQTLQNLT 339 (416)
T ss_dssp SCCEEEEEECSSS----CC-------CCEEECTTCTTEEEECCS---SSEEEEEESCCCC
T ss_pred CCccceeecCCCC----ce-------EEEEECCCCCCEEEEEec---CCcEEEEEccCCC
Confidence 8876554433211 01 125789999444443332 3568899987654
No 268
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.50 E-value=3.7e-13 Score=144.81 Aligned_cols=215 Identities=13% Similarity=0.139 Sum_probs=133.3
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++.... + . .|.||++||+....... ..|. .....|+ ++|.|++ .+.+|+
T Consensus 23 ~~g~~l~y~~~---g-----~--g~~vvllHG~~~~~~~~--------~~~~----~~~~~L~-~~~~vi~---~Dl~G~ 76 (296)
T 1j1i_A 23 AGGVETRYLEA---G-----K--GQPVILIHGGGAGAESE--------GNWR----NVIPILA-RHYRVIA---MDMLGF 76 (296)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCSTTCCHH--------HHHT----TTHHHHT-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCcchH--------HHHH----HHHHHHh-hcCEEEE---ECCCCC
Confidence 47888775543 1 1 35789999952110000 0011 1233444 4599999 666788
Q ss_pred CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC-----
Q 002194 727 GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT----- 799 (954)
Q Consensus 727 G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~----- 799 (954)
|.+... ........+|+.+.++.+ + + .+++.|+||||||.+|+.++.++|++++++|++++.......
T Consensus 77 G~S~~~~~~~~~~~~~~dl~~~l~~l---~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 151 (296)
T 1j1i_A 77 GKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR 151 (296)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHH
Confidence 887621 122445566665555443 2 2 158999999999999999999999999999999875421100
Q ss_pred C-CCCcc---------------cc-------chhhhc------HHHHHh-----------cCcccccCCCCCCEEEEEeC
Q 002194 800 P-FGFQN---------------ED-------RTLWEA------TSTYVE-----------MSPFMSANKLKKPILLVHGE 839 (954)
Q Consensus 800 ~-~~~~~---------------~~-------~~~~~~------~~~~~~-----------~sp~~~~~~~~~P~Lii~G~ 839 (954)
. +.+.. .. ...+.. ...+.. ......+.++++|+|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~ 231 (296)
T 1j1i_A 152 PIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 231 (296)
T ss_dssp ----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHhcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEEC
Confidence 0 00000 00 000000 000100 01223467889999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
+|..+| ++.+.++.+.+. +.++++++++||... .+..+.+.+.|.+||.+.+.
T Consensus 232 ~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 232 DDKVVP--VETAYKFLDLID----DSWGYIIPHCGHWAM-IEHPEDFANATLSFLSLRVD 284 (296)
T ss_dssp TCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHHC--
T ss_pred CCcccC--HHHHHHHHHHCC----CCEEEEECCCCCCch-hcCHHHHHHHHHHHHhccCC
Confidence 999998 888887776653 368999999999864 56678888999999998763
No 269
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.50 E-value=5e-12 Score=137.50 Aligned_cols=285 Identities=9% Similarity=0.069 Sum_probs=167.8
Q ss_pred CcccceeecCCC-CeEEEEEeeccccCCCCceEEEEEECCCC---ce-eecccCCCccccccccceeEecCCeEEEEEec
Q 002194 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTG---KA-RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIP 263 (954)
Q Consensus 189 ~~~~~~~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~d~~~g---~~-~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~ 263 (954)
..+...+|+|++ +.|+..+ .++...||-+..... .. +.+..+.. .+..+.|+|||++|+...
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s-------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~s- 84 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSAS-------RDKTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSAS- 84 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEE-------TTSEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEE-
T ss_pred ceEEEEEccCCCccEEEEec-------CCccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEEe-
Confidence 468889999977 5555433 334555554432221 11 12222222 267899999999998761
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccC
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPS 340 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~S 340 (954)
....|.++|+ +|+. +.+... ..+..++|+
T Consensus 85 ------------------------------------------------~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~ 116 (319)
T 3frx_A 85 ------------------------------------------------WDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116 (319)
T ss_dssp ------------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred ------------------------------------------------CCCEEEEEECCCCCeeEEEccCCCcEEEEEEc
Confidence 1234777788 7754 344444 778899999
Q ss_pred CCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC------Cce
Q 002194 341 PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP------STL 414 (954)
Q Consensus 341 pDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~------~i~ 414 (954)
|||+.|+..+.+ +.+.+||+++.....+..+. ..+..+.|+|+++ .++
T Consensus 117 ~~~~~l~s~s~D-------------~~i~vwd~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 117 KKASMIISGSRD-------------KTIKVWTIKGQCLATLLGHN-------------DWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp TTSCEEEEEETT-------------SCEEEEETTSCEEEEECCCS-------------SCEEEEEECCC------CCEEE
T ss_pred CCCCEEEEEeCC-------------CeEEEEECCCCeEEEEeccC-------------CcEEEEEEccCCCCCCCccEEE
Confidence 999999988744 38999999877665554332 2345677888543 222
Q ss_pred EEEEeccCCCccccccCCCeEEEEecCCCCCCC-ceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCC
Q 002194 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (954)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (954)
.. +..+.|.+|++ ...+ ...+..+...+..++|+|||+.|+..+.++ .|.++|+.++
T Consensus 171 s~-------------~~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg----~i~iwd~~~~-- 228 (319)
T 3frx_A 171 SA-------------GNDKMVKAWNL---NQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG----EIMLWNLAAK-- 228 (319)
T ss_dssp EE-------------ETTSCEEEEET---TTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC----EEEEEETTTT--
T ss_pred EE-------------eCCCEEEEEEC---CcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--
Confidence 22 33557889986 3332 234455667788899999999998876543 3555566654
Q ss_pred CcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcc
Q 002194 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (954)
Q Consensus 494 ~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 573 (954)
+....... ...+.. ++|+|||.+++.... ..+.+|+++++...........
T Consensus 229 ~~~~~~~~-~~~v~~------~~~sp~~~~la~~~~----------------------~~i~v~~~~~~~~~~~~~~~~~ 279 (319)
T 3frx_A 229 KAMYTLSA-QDEVFS------LAFSPNRYWLAAATA----------------------TGIKVFSLDPQYLVDDLRPEFA 279 (319)
T ss_dssp EEEEEEEC-CSCEEE------EEECSSSSEEEEEET----------------------TEEEEEEETTEEEEEEECCCCT
T ss_pred cEEEEecC-CCcEEE------EEEcCCCCEEEEEcC----------------------CCcEEEEeCcCeeeeccCcccc
Confidence 22222222 122333 889999999887651 1277777776544332222110
Q ss_pred cccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002194 574 KYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (954)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~ 618 (954)
.+..... ......+|||||+.|+..... ..+++|++.+
T Consensus 280 ~~~~~~~---~~v~~~~~spdg~~l~sg~~D----g~i~vWd~~t 317 (319)
T 3frx_A 280 GYSKAAE---PHAVSLAWSADGQTLFAGYTD----NVIRVWQVMT 317 (319)
T ss_dssp TCCGGGC---CCEEEEEECTTSSEEEEEETT----SCEEEEEEEE
T ss_pred ccccCcC---cceeEEEECCCCCEEEEeecC----ceEEEEEEee
Confidence 0000000 000125799999988754433 3477777544
No 270
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.49 E-value=3e-14 Score=154.12 Aligned_cols=222 Identities=15% Similarity=0.145 Sum_probs=138.4
Q ss_pred CceEEEEEEcC-CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-----
Q 002194 637 LQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA----- 710 (954)
Q Consensus 637 ~~~~~~~~~~~-~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~----- 710 (954)
...+.+++.+. -|.+...++|+|++|++. +.++|+|+++||... |.. .......+..
T Consensus 10 ~~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG~~~---------------f~~-~~~~~~~l~~~~~~~ 72 (331)
T 3gff_A 10 VEYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDGEDQ---------------FDH-MASLLQFLSQGTMPQ 72 (331)
T ss_dssp -CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSHHHH---------------HHH-HHHHHHHHTCSSSCS
T ss_pred ceEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecChhh---------------hHH-HHHHHHHHHhhhhcC
Confidence 34677777776 478999999999999763 235999999999410 100 0112223322
Q ss_pred -CCcEEEEcCCCC----CC-------CCCCc----c----cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHH
Q 002194 711 -RGFAILGGPTTP----II-------GEGDE----E----ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGA 770 (954)
Q Consensus 711 -~G~~V~~~~~~~----~~-------G~G~~----~----~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG 770 (954)
.+++||.+++.+ +. ..|.. . ....+.....+ +.+.++.++..+++.+ +|+|+||||
T Consensus 73 ~~~~IvV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~---el~p~i~~~~~~~~~r-~i~G~S~GG 148 (331)
T 3gff_A 73 IPKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEK---ELAPSIESQLRTNGIN-VLVGHSFGG 148 (331)
T ss_dssp SCCCEEEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHH---THHHHHHHHSCEEEEE-EEEEETHHH
T ss_pred CCCEEEEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHHH---HHHHHHHHHCCCCCCe-EEEEECHHH
Confidence 357777743310 00 00100 0 01122222232 4455666666666655 799999999
Q ss_pred HHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCC-------C
Q 002194 771 FMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDN-------N 843 (954)
Q Consensus 771 ~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~-------~ 843 (954)
++|++++.++|+.|+++++++|.+.+. .....+....+. ........|+++.||+.|. .
T Consensus 149 ~~al~~~~~~p~~F~~~~~~S~~~w~~---------~~~~~~~~~~~~-----~~~~~~~~~l~l~~G~~d~~~~~~~~~ 214 (331)
T 3gff_A 149 LVAMEALRTDRPLFSAYLALDTSLWFD---------SPHYLTLLEERV-----VKGDFKQKQLFMAIANNPLSPGFGVSS 214 (331)
T ss_dssp HHHHHHHHTTCSSCSEEEEESCCTTTT---------TTHHHHHHHHHH-----HHCCCSSEEEEEEECCCSEETTTEECC
T ss_pred HHHHHHHHhCchhhheeeEeCchhcCC---------hHHHHHHHHHHh-----hcccCCCCeEEEEeCCCCCCCccchHH
Confidence 999999999999999999999964211 011111111111 1112245799999999998 4
Q ss_pred CCCchHHHHHHHHHHHhC---CCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 844 SGTLTMQSDRFFNALKGH---GALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 844 v~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
++ ...+++++++|+.. |.++++.+||+++|.... ...+...++||-....
T Consensus 215 ~~--~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 215 YH--KDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp HH--HHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGGGC
T ss_pred HH--HHHHHHHHHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhhcC
Confidence 55 77889999999986 778999999999998632 2334455666655443
No 271
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.49 E-value=1.2e-13 Score=146.21 Aligned_cols=194 Identities=11% Similarity=0.136 Sum_probs=124.2
Q ss_pred cEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchh---hHHHHHHHHHHHH
Q 002194 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR---FVEQLVACAEAAV 747 (954)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~---~~~~~~~D~~~av 747 (954)
|.||++||.+.... .|. ..+..|++ +|.|++ .|.+|+|.+..... ......+|+.+.+
T Consensus 17 ~~vvllHG~~~~~~-----------~~~----~~~~~L~~-~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l 77 (269)
T 2xmz_A 17 QVLVFLHGFLSDSR-----------TYH----NHIEKFTD-NYHVIT---IDLPGHGEDQSSMDETWNFDYITTLLDRIL 77 (269)
T ss_dssp EEEEEECCTTCCGG-----------GGT----TTHHHHHT-TSEEEE---ECCTTSTTCCCCTTSCCCHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHH-----------HHH----HHHHHHhh-cCeEEE---ecCCCCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 45999999742211 121 23445554 599999 67778888865422 3455666666665
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC---------------------------
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--------------------------- 800 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--------------------------- 800 (954)
+.+ +.+++.++||||||.+|+.++.++|++++++|++++........
T Consensus 78 ~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T 2xmz_A 78 DKY------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVND 151 (269)
T ss_dssp GGG------TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHc------CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHH
Confidence 553 34689999999999999999999999999999998753321000
Q ss_pred CC----Cccc---cc----hhhh-----cHH----HHHh------cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHH
Q 002194 801 FG----FQNE---DR----TLWE-----ATS----TYVE------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (954)
Q Consensus 801 ~~----~~~~---~~----~~~~-----~~~----~~~~------~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (954)
+. +... .. ..+. ... .+.. .+....+.++++|+|+++|++|..+| .... ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~-~~ 228 (269)
T 2xmz_A 152 WEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAK-KM 228 (269)
T ss_dssp HTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHH--HHHH-HH
T ss_pred HHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccC--HHHH-HH
Confidence 00 0000 00 0000 000 0000 01123456789999999999999886 5543 34
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
.+.+ .++++++++++||... .+..+.+.+.|.+||++.
T Consensus 229 ~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 229 ANLI----PNSKCKLISATGHTIH-VEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHS----TTEEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred HhhC----CCcEEEEeCCCCCChh-hcCHHHHHHHHHHHHHHh
Confidence 4333 3479999999999874 456778889999999864
No 272
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.49 E-value=5.1e-13 Score=143.08 Aligned_cols=170 Identities=16% Similarity=0.119 Sum_probs=111.1
Q ss_pred HCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccE
Q 002194 710 ARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a 786 (954)
+++|.|++ .+.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|+++++
T Consensus 64 ~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~ 134 (289)
T 1u2e_A 64 EAGYRVIL---LDCPGWGKSDSVVNSGSRSDLNARILKSVVDQL------DIAKIHLLGNSMGGHSSVAFTLKWPERVGK 134 (289)
T ss_dssp HTTCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred hcCCeEEE---EcCCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHCHHhhhE
Confidence 45599999 6667888875532 22334445555544432 346899999999999999999999999999
Q ss_pred EEEeccCCCCCC--CCCC---------------------------Ccccc--ch----hhh----cHHHHH---------
Q 002194 787 GIARSGAYNRTL--TPFG---------------------------FQNED--RT----LWE----ATSTYV--------- 818 (954)
Q Consensus 787 ~v~~~~~~~~~~--~~~~---------------------------~~~~~--~~----~~~----~~~~~~--------- 818 (954)
+|++++...... .... +.... .. .+. .+..+.
T Consensus 135 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (289)
T 1u2e_A 135 LVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEAN 214 (289)
T ss_dssp EEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred EEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhc
Confidence 999987542100 0000 00000 00 000 000010
Q ss_pred ---hcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 819 ---EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 819 ---~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
..+....+.++++|+|+++|++|..+| ++.++++.+.+.. .++++++++||... .+....+.+.+.+||.
T Consensus 215 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 215 PKQFPDFGPRLAEIKAQTLIVWGRNDRFVP--MDAGLRLLSGIAG----SELHIFRDCGHWAQ-WEHADAFNQLVLNFLA 287 (289)
T ss_dssp SCCSCCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHSTT----CEEEEESSCCSCHH-HHTHHHHHHHHHHHHT
T ss_pred cccccchhhHHhhcCCCeEEEeeCCCCccC--HHHHHHHHhhCCC----cEEEEeCCCCCchh-hcCHHHHHHHHHHHhc
Confidence 011223567789999999999999998 8888888776643 48899999999863 4556677778888874
No 273
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.49 E-value=2.4e-13 Score=142.68 Aligned_cols=196 Identities=14% Similarity=0.103 Sum_probs=124.7
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch-hhHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND-RFVEQLVACAEAAVE 748 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~av~ 748 (954)
.|.||++||.+... ..| ......|++ .|.|++ .|.+|+|.+.... .......+|+.+.++
T Consensus 16 ~~~vvllHG~~~~~-----------~~w----~~~~~~L~~-~~~via---~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 16 NSPIVLVHGLFGSL-----------DNL----GVLARDLVN-DHNIIQ---VDVRNHGLSPREPVMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCTTCCT-----------TTT----HHHHHHHTT-TSCEEE---ECCTTSTTSCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCcccH-----------hHH----HHHHHHHHh-hCcEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46789999964211 112 123444544 499999 6677888875532 234566777777777
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCC-CCCCCCC-------------CCcccc--chh--
Q 002194 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY-NRTLTPF-------------GFQNED--RTL-- 810 (954)
Q Consensus 749 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~-~~~~~~~-------------~~~~~~--~~~-- 810 (954)
.+ +.+++.++||||||.+|+.++.++|++++++|++++.. ......+ .+.... ...
T Consensus 77 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T 3bf7_A 77 AL------QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150 (255)
T ss_dssp HH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHT
T ss_pred Hc------CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHh
Confidence 65 23589999999999999999999999999999875321 1000000 000000 000
Q ss_pred --------------------hhc-HHH----HHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcE
Q 002194 811 --------------------WEA-TST----YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALC 865 (954)
Q Consensus 811 --------------------~~~-~~~----~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 865 (954)
|.. ... +........+.++++|+|+++|++|..++ +..++++.+.+. +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~----~~ 224 (255)
T 3bf7_A 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS--EQYRDDLLAQFP----QA 224 (255)
T ss_dssp TTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTC--GGGHHHHHHHCT----TE
T ss_pred hhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCC--HHHHHHHHHHCC----CC
Confidence 000 000 00000001245788999999999999988 777777765543 37
Q ss_pred EEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 866 RLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 866 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
+++++|++||... .+....+.+.+.+||.+|
T Consensus 225 ~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp EECCBTTCCSCHH-HHCHHHHHHHHHHHHHTC
T ss_pred eEEEeCCCCCccc-cCCHHHHHHHHHHHHhcC
Confidence 9999999999863 556678888999998754
No 274
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.49 E-value=3.3e-12 Score=152.47 Aligned_cols=244 Identities=11% Similarity=0.037 Sum_probs=153.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCC-CceeeeecCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-GQEIEIQGFPDG 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~-~~~~~lt~~~~~ 188 (954)
.+..++|||||++||+.... .|.+|++.+.... .....+.. +.
T Consensus 20 ~v~~~~~spdg~~l~~~~~~----------------------------------~v~v~~~~~~~~~~~~~~~~~~--h~ 63 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGK----------------------------------SAFVRCLDDGDSKVPPVVQFTG--HG 63 (615)
T ss_dssp CCCCCEEETTTTEEEEEETT----------------------------------EEEEEECCSSCCSSCSEEEECT--TT
T ss_pred ceeEEEECCCCCEEEEecCC----------------------------------eEEEEECCCCCCccccceEEec--CC
Confidence 57789999999999998853 7899998641000 12334433 23
Q ss_pred Cc-ccceeecC--CCCeEEEEEeeccccCCCCceEEEEEECCCC--------ceeecccCCCccccccccceeEecCCeE
Q 002194 189 AK-LNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTG--------KARPLFQSPDIYLNAIFDNFVWVNNSTL 257 (954)
Q Consensus 189 ~~-~~~~~wSP--DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g--------~~~~lt~~~~~~~~~~~~~~~wspDG~~ 257 (954)
.. +..++||| ||++|+... . ...|.+++++++ +.......... .+..++|+|||+.
T Consensus 64 ~~~v~~~~~sp~~~~~~l~s~~-------~--dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~ 130 (615)
T 1pgu_A 64 SSVVTTVKFSPIKGSQYLCSGD-------E--SGKVIVWGWTFDKESNSVEVNVKSEFQVLAG----PISDISWDFEGRR 130 (615)
T ss_dssp TSCEEEEEECSSTTCCEEEEEE-------T--TSEEEEEEEEEEGGGTEEEEEEEEEEECCSS----CEEEEEECTTSSE
T ss_pred CceEEEEEECcCCCCCEEEEec-------C--CCEEEEEeCCCCcccccccccccchhhcccc----cEEEEEEeCCCCE
Confidence 46 88999999 999998865 2 345555565443 22221111221 2778999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCCC-ccccc
Q 002194 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTS 336 (954)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~~-~~~~~ 336 (954)
|++...... ....|+.++.......+... ..+..
T Consensus 131 l~~~~~~~~---------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 131 LCVVGEGRD---------------------------------------------NFGVFISWDSGNSLGEVSGHSQRINA 165 (615)
T ss_dssp EEEEECCSS---------------------------------------------CSEEEEETTTCCEEEECCSCSSCEEE
T ss_pred EEEeccCCC---------------------------------------------CccEEEEEECCCcceeeecCCccEEE
Confidence 987721100 11345555533334444444 77888
Q ss_pred cccCCCCcE-EEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccC-CCCc
Q 002194 337 LDPSPDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSD-KPST 413 (954)
Q Consensus 337 ~~~SpDGk~-l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspD-g~~i 413 (954)
++|+|||+. ++..+ . ++.+.+||+...+. ..+..+... ...+..++|+|| |+.+
T Consensus 166 ~~~~~~~~~~l~~~~-~------------d~~v~vwd~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l 222 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVG-D------------DGSVVFYQGPPFKFSASDRTHHKQ----------GSFVRDVEFSPDSGEFV 222 (615)
T ss_dssp EEECSSSSCEEEEEE-T------------TTEEEEEETTTBEEEEEECSSSCT----------TCCEEEEEECSTTCCEE
T ss_pred EEECCCCCcEEEEEe-C------------CCcEEEEeCCCcceeeeecccCCC----------CceEEEEEECCCCCCEE
Confidence 999999995 44444 2 23899999886554 333322110 014567999999 8866
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEE-e---ecccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL-H---KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l-~---~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
+.. +..+.|.+|++ ..++. ..+ . .+...+..+.|+ |++.|+....++ .|.++++
T Consensus 223 ~~~-------------~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~----~i~~wd~ 281 (615)
T 1pgu_A 223 ITV-------------GSDRKISCFDG---KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADA----TIRVWDV 281 (615)
T ss_dssp EEE-------------ETTCCEEEEET---TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTS----EEEEEET
T ss_pred EEE-------------eCCCeEEEEEC---CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCC----cEEEEEC
Confidence 655 33557899996 44443 444 3 556677889999 999888876443 3566666
Q ss_pred CCC
Q 002194 489 GSK 491 (954)
Q Consensus 489 ~~~ 491 (954)
.++
T Consensus 282 ~~~ 284 (615)
T 1pgu_A 282 TTS 284 (615)
T ss_dssp TTT
T ss_pred CCC
Confidence 654
No 275
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.49 E-value=2.7e-12 Score=140.70 Aligned_cols=267 Identities=6% Similarity=-0.014 Sum_probs=167.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++|+....+ +.|++|++...........+.. ...
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d---------------------------------~~v~iw~~~~~~~~~~~~~~~~--~~~ 57 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWD---------------------------------GSLTVYKFDIQAKNVDLLQSLR--YKH 57 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETT---------------------------------SEEEEEEEETTTTEEEEEEEEE--CSS
T ss_pred cEEEEEEcCCCCEEEEEcCC---------------------------------CeEEEEEeCCCCccccceeeee--cCC
Confidence 46678999999999988775 5799999864110001333333 334
Q ss_pred cccceeecCCCC-eEEEEEeeccccCCCCceEEEEEEC-CCCceeeccc--CCCccccccccceeEecCCeEEEEEecCC
Q 002194 190 KLNFVTWSQDGK-HLAFSIRIDAEDSSSSKLRVWVADV-DTGKARPLFQ--SPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (954)
Q Consensus 190 ~~~~~~wSPDG~-~iaf~~~~~~~~~~~~~~~l~~~d~-~~g~~~~lt~--~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (954)
.+..+.|+|||+ .|+.... ...|+++++ ++++...+.. .... +..+.|+| ++.|+...
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~---------dg~i~~wd~~~~~~~~~~~~~~~~~~-----v~~l~~~~-~~~l~s~~--- 119 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTV---------QGEILKVDLIGSPSFQALTNNEANLG-----ICRICKYG-DDKLIAAS--- 119 (342)
T ss_dssp CEEEEEEEESSSEEEEEEET---------TSCEEEECSSSSSSEEECBSCCCCSC-----EEEEEEET-TTEEEEEE---
T ss_pred ceEEEEECCCCCcEEEEEcC---------CCeEEEEEeccCCceEeccccCCCCc-----eEEEEeCC-CCEEEEEc---
Confidence 788999999999 8887542 457888898 8888776654 3332 77899999 88887661
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C---------Cce-eEcCCCccc
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---------GTV-KEIGPPAVY 334 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~---------G~~-~~l~~~~~~ 334 (954)
....|.++++ + ++. ..+.....+
T Consensus 120 ----------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 153 (342)
T 1yfq_A 120 ----------------------------------------------WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI 153 (342)
T ss_dssp ----------------------------------------------TTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred ----------------------------------------------CCCeEEEEcccccccccccccCCeeeEEeeCCce
Confidence 1233556665 4 432 223323677
Q ss_pred cccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC-ce--EEEeccCCCcccCCccccccccCccceeecc-CC
Q 002194 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IF--VRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DK 410 (954)
Q Consensus 335 ~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g-~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp-Dg 410 (954)
..++|+||+ ++..+.+ +.+.+||+.. .. ...... .....+..++|+| ||
T Consensus 154 ~~~~~~~~~--l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~~------------~~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 154 FTMDTNSSR--LIVGMNN-------------SQVQWFRLPLCEDDNGTIEES------------GLKYQIRDVALLPKEQ 206 (342)
T ss_dssp EEEEECSSE--EEEEEST-------------TEEEEEESSCCTTCCCEEEEC------------SCSSCEEEEEECSGGG
T ss_pred EEEEecCCc--EEEEeCC-------------CeEEEEECCccccccceeeec------------CCCCceeEEEECCCCC
Confidence 889999998 5555522 3899999986 32 111111 1113456789999 99
Q ss_pred CCceEEEEeccCCCccccccCCCeEEEEecCCCC----CCCceEEeeccc---------ccCceeeccCCceEEEEEecc
Q 002194 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ----GEGPEILHKLDL---------RYGGISWCDDSLALVYESWYK 477 (954)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----g~~~~~l~~~~~---------~~~~~~~spDg~~l~~~~~~~ 477 (954)
+.++.. +..+.+.+|+++... ......+..+.. .+..++|+|||+.|+....++
T Consensus 207 ~~l~~~-------------~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 273 (342)
T 1yfq_A 207 EGYACS-------------SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG 273 (342)
T ss_dssp CEEEEE-------------ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS
T ss_pred CEEEEE-------------ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc
Confidence 876665 334567777752110 133344444432 677899999999988776443
Q ss_pred ccceEEEEEcCCCCCCCcEEEecCC-CCCccCCCCCCCeeeccCCcEEEEEEe
Q 002194 478 TRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (954)
Q Consensus 478 ~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~spdG~~l~~~~~ 529 (954)
.|+++|+.++ +........ ...+.. ++ |||++|+....
T Consensus 274 ----~i~vwd~~~~--~~~~~~~~~h~~~v~~------~~--~~~~~l~s~s~ 312 (342)
T 1yfq_A 274 ----IISCWNLQTR--KKIKNFAKFNEDSVVK------IA--CSDNILCLATS 312 (342)
T ss_dssp ----CEEEEETTTT--EEEEECCCCSSSEEEE------EE--ECSSEEEEEEE
T ss_pred ----eEEEEcCccH--hHhhhhhcccCCCceE------ec--CCCCeEEEEec
Confidence 3666677664 222222222 222222 33 99999988874
No 276
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.49 E-value=1.9e-13 Score=146.45 Aligned_cols=209 Identities=8% Similarity=-0.071 Sum_probs=133.9
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (954)
..+|.+++...+-+ .|+||++||++.... .|.. .+..|+ ++|.|++ .+..|
T Consensus 14 ~~~g~~l~~~~~g~----------~~~vv~lHG~~~~~~-----------~~~~----~~~~l~-~~~~vi~---~D~~G 64 (297)
T 2qvb_A 14 EIAGKRMAYIDEGK----------GDAIVFQHGNPTSSY-----------LWRN----IMPHLE-GLGRLVA---CDLIG 64 (297)
T ss_dssp EETTEEEEEEEESS----------SSEEEEECCTTCCGG-----------GGTT----TGGGGT-TSSEEEE---ECCTT
T ss_pred EECCEEEEEEecCC----------CCeEEEECCCCchHH-----------HHHH----HHHHHh-hcCeEEE---EcCCC
Confidence 34788887665521 378999999743211 1111 122333 4599999 56667
Q ss_pred CCCcccch------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC
Q 002194 726 EGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (954)
Q Consensus 726 ~G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~ 798 (954)
+|.+.... .......+|+.++++.+ +. +++.++|||+||.+++.++.++|++++++|+++|......
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 138 (297)
T 2qvb_A 65 MGASDKLSPSGPDRYSYGEQRDFLFALWDAL------DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMT 138 (297)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBC
T ss_pred CCCCCCCCCccccCcCHHHHHHHHHHHHHHc------CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCcc
Confidence 77775432 23456667777766654 33 6899999999999999999999999999999998653110
Q ss_pred CC-CC--C---------c----------------------cccc---------------hhhhcH-HHHHhc--------
Q 002194 799 TP-FG--F---------Q----------------------NEDR---------------TLWEAT-STYVEM-------- 820 (954)
Q Consensus 799 ~~-~~--~---------~----------------------~~~~---------------~~~~~~-~~~~~~-------- 820 (954)
.. .. . . .... ...... ..+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2qvb_A 139 WADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAE 218 (297)
T ss_dssp GGGSCGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHH
T ss_pred CCCCChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchh
Confidence 00 00 0 0 0000 000000 000000
Q ss_pred ------CcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 821 ------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 821 ------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
+....+.++++|+|+++|++|..+| .+.++++.+.+ .. +++++ ++||... .++...+.+.|.+||
T Consensus 219 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~~~p~~~~~~i~~fl 289 (297)
T 2qvb_A 219 VVALVNEYRSWLEETDMPKLFINAEPGAIIT--GRIRDYVRSWP----NQ-TEITV-PGVHFVQ-EDSPEEIGAAIAQFV 289 (297)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHTSS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccccccEEEEecCCCCcCC--HHHHHHHHHHc----CC-eEEEe-cCccchh-hhCHHHHHHHHHHHH
Confidence 1123445688999999999999998 77776665543 23 78888 9999864 566788899999999
Q ss_pred HHhc
Q 002194 895 QKYC 898 (954)
Q Consensus 895 ~~~l 898 (954)
++..
T Consensus 290 ~~~~ 293 (297)
T 2qvb_A 290 RRLR 293 (297)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 277
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.49 E-value=2e-12 Score=143.00 Aligned_cols=260 Identities=12% Similarity=0.099 Sum_probs=153.1
Q ss_pred ceEEEEccCCCCCCceeeeecCC---CCCcccceeecCC----CCeEEEEEeeccccCCCCceEEEEEECCCCceeeccc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFP---DGAKLNFVTWSQD----GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQ 236 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~---~~~~~~~~~wSPD----G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~ 236 (954)
.|.+|++... ...+.+..+. ....+....|+|| |+.|+... ....|.++++++++......
T Consensus 45 ~v~vw~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~---------~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 45 RVTLYECHSQ---GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG---------SRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp EEEEEEECGG---GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE---------TTCEEEEECTTTCCEEEEEE
T ss_pred EEEEEEcCCC---cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec---------CCCEEEEEEchhceEeeeec
Confidence 6889998642 2223333221 2236888999999 55666644 25578888988877655443
Q ss_pred CCCccccccccceeEec-CCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccce
Q 002194 237 SPDIYLNAIFDNFVWVN-NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQ 315 (954)
Q Consensus 237 ~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~ 315 (954)
..... +..+.|+| |++.|+... ....
T Consensus 113 ~~~~~----i~~~~~~~~~~~~l~s~~-------------------------------------------------~dg~ 139 (366)
T 3k26_A 113 GHGNA----INELKFHPRDPNLLLSVS-------------------------------------------------KDHA 139 (366)
T ss_dssp SCCSC----EEEEEECSSCTTEEEEEE-------------------------------------------------TTSC
T ss_pred CCCCc----EEEEEECCCCCCEEEEEe-------------------------------------------------CCCe
Confidence 23222 77899999 898888661 1234
Q ss_pred EEEEEe-CCceeEc----CCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEE-ecc----C
Q 002194 316 LVLVSL-DGTVKEI----GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCD----L 384 (954)
Q Consensus 316 l~~~~~-~G~~~~l----~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~-l~~----~ 384 (954)
|.++++ +++.... ... ..+..++|+|||++|+..+.+ +.+.+||+..++... +.. .
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------------HSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESCSHHHHHHHHHHHTCC
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-------------CCEEEEECCCCccccccceeEEec
Confidence 778888 6654333 233 778899999999999888743 389999998643211 110 0
Q ss_pred CCcccCC---------c--cccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC------
Q 002194 385 PLAEDIP---------I--AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG------ 447 (954)
Q Consensus 385 ~~~~~~p---------~--~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~------ 447 (954)
+.....+ . ........+..++|+ |+.++.. +..+.|.+|++ ..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-------------~~d~~i~~wd~--~~~~~~~~~~~ 269 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK-------------SCENAIVCWKP--GKMEDDIDKIK 269 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE-------------CSSSEEEEEEE--SSTTCCGGGCC
T ss_pred CCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE-------------ecCCEEEEEeC--CCccccccccc
Confidence 0000000 0 011123445667887 4444333 34557888886 22211
Q ss_pred --------ceEEeecccccCceeeccC--CceEEEEEeccccceEEEEEcCCCCCCC--cEEEecCC--CCCccCCCCCC
Q 002194 448 --------PEILHKLDLRYGGISWCDD--SLALVYESWYKTRRTRTWVISPGSKDVA--PRILFDRS--SEDVYSDPGSP 513 (954)
Q Consensus 448 --------~~~l~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~l~~~d~~~~~~~--~~~l~~~~--~~~~~~~~~~~ 513 (954)
...+..+...+..++|+|| |+.|+....++ .|+++++.++... .......+ ...+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~----- 340 (366)
T 3k26_A 270 PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG----KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQ----- 340 (366)
T ss_dssp TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS----CEEEEECCSSSGGGCEEEEECCTTCCSCEEE-----
T ss_pred cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC----cEEEEECCCCCCccccceEEcccccCCceEE-----
Confidence 2233445556788999999 99888775443 3555555554211 11122222 223333
Q ss_pred CeeeccCCcEEEEEE
Q 002194 514 MMRRTSTGTYVIAKI 528 (954)
Q Consensus 514 ~~~~spdG~~l~~~~ 528 (954)
+.|+|||++|+...
T Consensus 341 -~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 341 -TSFSRDSSILIAVC 354 (366)
T ss_dssp -EEECTTSSEEEEEE
T ss_pred -EEeCCCCCeEEEEe
Confidence 78999999988776
No 278
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.48 E-value=2.7e-13 Score=145.92 Aligned_cols=210 Identities=12% Similarity=0.041 Sum_probs=126.4
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (954)
..+|.+++....- + .|.||++||...... .|. ..+..|++ ||.|++ .+..|
T Consensus 19 ~~~g~~l~~~~~g-------~---~~~vv~lHG~~~~~~-----------~~~----~~~~~l~~-~~~v~~---~D~~G 69 (306)
T 3r40_A 19 NTSSGRIFARVGG-------D---GPPLLLLHGFPQTHV-----------MWH----RVAPKLAE-RFKVIV---ADLPG 69 (306)
T ss_dssp CCTTCCEEEEEEE-------C---SSEEEEECCTTCCGG-----------GGG----GTHHHHHT-TSEEEE---ECCTT
T ss_pred EeCCEEEEEEEcC-------C---CCeEEEECCCCCCHH-----------HHH----HHHHHhcc-CCeEEE---eCCCC
Confidence 4578888766542 1 478999999742211 121 23445555 999999 66678
Q ss_pred CCCcccch-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCC-
Q 002194 726 EGDEEAND-------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT- 797 (954)
Q Consensus 726 ~G~~~~~~-------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~- 797 (954)
+|.+.... .......+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++.....
T Consensus 70 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 143 (306)
T 3r40_A 70 YGWSDMPESDEQHTPYTKRAMAKQLIEAMEQL------GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEY 143 (306)
T ss_dssp STTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHH
T ss_pred CCCCCCCCCCcccCCCCHHHHHHHHHHHHHHh------CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccc
Confidence 88775432 22455566666665553 34589999999999999999999999999999998642100
Q ss_pred --------------------CC---------------------------CCCCccccch----hhhcH-------HHHHh
Q 002194 798 --------------------LT---------------------------PFGFQNEDRT----LWEAT-------STYVE 819 (954)
Q Consensus 798 --------------------~~---------------------------~~~~~~~~~~----~~~~~-------~~~~~ 819 (954)
.. ...+...... .+..+ ..+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (306)
T 3r40_A 144 WQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRA 223 (306)
T ss_dssp HHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHh
Confidence 00 0000000000 00000 00000
Q ss_pred c---------CcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHH
Q 002194 820 M---------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWET 890 (954)
Q Consensus 820 ~---------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i 890 (954)
. .....+.++++|+|+++|++|..+| .....+.++.+. .+++++++ ++||.. ..++.+.+.+.|
T Consensus 224 ~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~-~~gH~~-~~e~p~~~~~~i 296 (306)
T 3r40_A 224 GAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQS--AATPLDVWRKWA---SDVQGAPI-ESGHFL-PEEAPDQTAEAL 296 (306)
T ss_dssp HHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC--------CHHHHHHHB---SSEEEEEE-SSCSCH-HHHSHHHHHHHH
T ss_pred cccccchhhhhhhhhccCCCcceEEEEecCCcccC--chhHHHHHHhhc---CCCeEEEe-cCCcCc-hhhChHHHHHHH
Confidence 0 0001347889999999999999987 566555555443 34677777 679976 356677888889
Q ss_pred HHHHHHh
Q 002194 891 DRWLQKY 897 (954)
Q Consensus 891 ~~fl~~~ 897 (954)
.+||++.
T Consensus 297 ~~fl~~~ 303 (306)
T 3r40_A 297 VRFFSAA 303 (306)
T ss_dssp HHHHHC-
T ss_pred HHHHHhc
Confidence 9998764
No 279
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.48 E-value=6.4e-13 Score=141.03 Aligned_cols=199 Identities=9% Similarity=0.009 Sum_probs=126.5
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (954)
.|.||++||.+... ..|. .....|+++||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 4 ~~~vvllHG~~~~~-----------~~w~----~~~~~L~~~g~rVia---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 65 (273)
T 1xkl_A 4 GKHFVLVHGACHGG-----------WSWY----KLKPLLEAAGHKVTA---LDLAASGTDLRKIEELRTLYDYTLPLMEL 65 (273)
T ss_dssp CCEEEEECCTTCCG-----------GGGT----THHHHHHHTTCEEEE---CCCTTSTTCCCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCc-----------chHH----HHHHHHHhCCCEEEE---ecCCCCCCCccCcccccCHHHHHHHHHHH
Confidence 36799999964211 1121 246677889999999 7778888885421 2345556666555
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC-CC---------------CC------Cc
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-TP---------------FG------FQ 804 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~-~~---------------~~------~~ 804 (954)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++...... .. +. +.
T Consensus 66 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T 1xkl_A 66 MESL---SA--DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYG 140 (273)
T ss_dssp HHTS---CS--SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECS
T ss_pred HHHh---cc--CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhcc
Confidence 4443 21 25899999999999999999999999999999886421100 00 00 00
Q ss_pred ----c-c---cch-h-----hh--cH--HHHH-h-cCcc----------ccc---CCCCCCEEEEEeCCCCCCCCchHHH
Q 002194 805 ----N-E---DRT-L-----WE--AT--STYV-E-MSPF----------MSA---NKLKKPILLVHGEEDNNSGTLTMQS 851 (954)
Q Consensus 805 ----~-~---~~~-~-----~~--~~--~~~~-~-~sp~----------~~~---~~~~~P~Lii~G~~D~~v~~~~~~~ 851 (954)
. . ... . +. .. ..+. . ..+. ... ...++|+|+|+|++|..+| +..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~ 218 (273)
T 1xkl_A 141 SPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQ 218 (273)
T ss_dssp CTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHH
T ss_pred CCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCC--HHHH
Confidence 0 0 000 0 00 00 0000 0 0010 000 1135799999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
+++.+.+.. .+++++|++||... .+..+.+.+.|.+|+.+..
T Consensus 219 ~~~~~~~p~----~~~~~i~~aGH~~~-~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 219 RWQIDNIGV----TEAIEIKGADHMAM-LCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp HHHHHHHCC----SEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHCC
T ss_pred HHHHHhCCC----CeEEEeCCCCCCch-hcCHHHHHHHHHHHHHHhc
Confidence 888776643 48889999999863 5667888999999998754
No 280
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.48 E-value=1.4e-12 Score=139.19 Aligned_cols=216 Identities=18% Similarity=0.201 Sum_probs=132.4
Q ss_pred EEEEEEcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcC
Q 002194 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (954)
Q Consensus 640 ~~~~~~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (954)
+...+...+|.+++...+-+++ +.|.||++||.+... ..| ...+..| ++||.|++
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~~-----------~~~----~~~~~~L-~~~~~vi~-- 60 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDI-------SRPPVLCLPGLTRNA-----------RDF----EDLATRL-AGDWRVLC-- 60 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCT-------TSCCEEEECCTTCCG-----------GGG----HHHHHHH-BBTBCEEE--
T ss_pred ccCeeecCCCceEEEEEcCCCC-------CCCcEEEECCCCcch-----------hhH----HHHHHHh-hcCCEEEe--
Confidence 4556777899999988775432 136688999964211 011 1233344 45999999
Q ss_pred CCCCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC--
Q 002194 720 TTPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA-- 793 (954)
Q Consensus 720 ~~~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~-- 793 (954)
.|.+|+|.+.... .......+|+.+.++.+ ..+++.++||||||.+|+.+|.++|++++++|+.++.
T Consensus 61 -~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 133 (285)
T 3bwx_A 61 -PEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQE------GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPE 133 (285)
T ss_dssp -ECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSS
T ss_pred -ecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcc
Confidence 6677888875421 23456677887777765 2358999999999999999999999999999986531
Q ss_pred CCCC-----------CC---CC-------------CCccccchhhhcH-H-HHHh---------cCc-----cc------
Q 002194 794 YNRT-----------LT---PF-------------GFQNEDRTLWEAT-S-TYVE---------MSP-----FM------ 824 (954)
Q Consensus 794 ~~~~-----------~~---~~-------------~~~~~~~~~~~~~-~-~~~~---------~sp-----~~------ 824 (954)
.... .. .+ .+.......|... . .+.. +++ +.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (285)
T 3bwx_A 134 VSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGAT 213 (285)
T ss_dssp CCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCC
T ss_pred cCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhcc
Confidence 1100 00 00 0000000001000 0 0000 000 00
Q ss_pred -------ccCCC-CCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 825 -------SANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 825 -------~~~~~-~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
.+.++ ++|+|+++|++|..++ +..++++.+ . .++++++++++||... .+..+. +..|.+||.+
T Consensus 214 ~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~----~-~~~~~~~i~~~gH~~~-~e~p~~-~~~i~~fl~~ 284 (285)
T 3bwx_A 214 PQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAKMAS----R-PGVELVTLPRIGHAPT-LDEPES-IAAIGRLLER 284 (285)
T ss_dssp CSSCCHHHHHHHTTSCEEEEEETTCSSSC--HHHHHHHHT----S-TTEEEEEETTCCSCCC-SCSHHH-HHHHHHHHTT
T ss_pred ccchhhHHHHHccCCCeEEEEeCCCCccC--HHHHHHHHh----C-CCcEEEEeCCCCccch-hhCchH-HHHHHHHHHh
Confidence 01223 7899999999999988 766655543 3 4589999999999864 344444 4678888753
No 281
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.48 E-value=4.1e-13 Score=142.63 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=146.4
Q ss_pred ceEEEEEEcC-CCeEEEEEEEcCCCCCCC---CCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCc
Q 002194 638 QKELIKYQRK-DGVQLSATLYLPPGYDPS---KDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (954)
Q Consensus 638 ~~~~~~~~~~-~g~~l~~~l~~P~~~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (954)
....+++.+. -|.++...+|+|++|... +++++|+|.++||..... ..|...+ ...+.+...|.
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~-----------~~w~~~~-~~~~~~~~~~~ 80 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTP-----------DNASEKA-FWQFQADKYGF 80 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCH-----------HHHHHHS-CHHHHHHHHTC
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCCh-----------HHHHHhc-hHhHHHHHcCc
Confidence 4556677654 578899999999988532 234699999999963110 1111111 12334456788
Q ss_pred EEEEcCCCCC----C---------CCCCccc----------chhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEee
Q 002194 714 AILGGPTTPI----I---------GEGDEEA----------NDRFVEQLVACAEAAVEEVVR----RGVAHPSKIAVGGH 766 (954)
Q Consensus 714 ~V~~~~~~~~----~---------G~G~~~~----------~~~~~~~~~~D~~~av~~l~~----~~~~d~~ri~l~G~ 766 (954)
+++.++.... . |.+..+. ...+....++|+...++.-.. +...+.++.+|+|+
T Consensus 81 ~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~ 160 (299)
T 4fol_A 81 AIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGI 160 (299)
T ss_dssp EEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEB
T ss_pred hhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEec
Confidence 8888443110 0 1111110 123345566666666553321 11234578999999
Q ss_pred ChHHHHHHHHHHhC--CCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCC---C-CCCEEEEEeCC
Q 002194 767 SYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANK---L-KKPILLVHGEE 840 (954)
Q Consensus 767 S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~---~-~~P~Lii~G~~ 840 (954)
||||+-|+.++.++ |++++++.+.+|+.+....++...............+..+++...+.+ . ..++||-+|+.
T Consensus 161 SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~ 240 (299)
T 4fol_A 161 SMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDS 240 (299)
T ss_dssp THHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETT
T ss_pred CchHHHHHHHHHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCC
Confidence 99999999999985 678999999999876433322211111111222333444555443333 2 35799999999
Q ss_pred CCCCCCchHH--HHHHHHHHHhCCCc--EEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcc
Q 002194 841 DNNSGTLTMQ--SDRFFNALKGHGAL--CRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (954)
Q Consensus 841 D~~v~~~~~~--~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (954)
|.... .+ ...+.++++.+|.+ +++...||.+|.+.. ....+++.+.|..++|+
T Consensus 241 D~f~~---~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 241 DPFLE---EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp CTTHH---HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred Ccchh---hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 98742 22 36788999988865 788899998998643 23456667888888874
No 282
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.48 E-value=6.4e-13 Score=143.90 Aligned_cols=209 Identities=13% Similarity=0.053 Sum_probs=133.8
Q ss_pred eEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCc
Q 002194 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDE 729 (954)
Q Consensus 650 ~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~ 729 (954)
.+++....-|++ +.|.||++||.+.... .|. .....|+++||.|++ .|.+|+|.+
T Consensus 34 ~~l~y~~~G~~~-------~g~~vvllHG~~~~~~-----------~w~----~~~~~L~~~g~rvia---~Dl~G~G~S 88 (310)
T 1b6g_A 34 LRAHYLDEGNSD-------AEDVFLCLHGEPTWSY-----------LYR----KMIPVFAESGARVIA---PDFFGFGKS 88 (310)
T ss_dssp CEEEEEEEECTT-------CSCEEEECCCTTCCGG-----------GGT----TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEeCCCC-------CCCEEEEECCCCCchh-----------hHH----HHHHHHHhCCCeEEE---eCCCCCCCC
Confidence 888776654421 0367999999752211 121 235578888999999 777889988
Q ss_pred ccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCC--CC------
Q 002194 730 EAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN--RT------ 797 (954)
Q Consensus 730 ~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~--~~------ 797 (954)
..+. .......+|+.+.++.| +.+++.|+||||||.+|+.+|.++|++++++|++++... ..
T Consensus 89 ~~~~~~~~y~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~ 162 (310)
T 1b6g_A 89 DKPVDEEDYTFEFHRNFLLALIERL------DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFS 162 (310)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHH
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHc------CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchh
Confidence 6542 23566677877777766 235899999999999999999999999999999987431 10
Q ss_pred ----CCCCCC---------cccc----------chhh-hcHHHHH----------------h--cC-----------ccc
Q 002194 798 ----LTPFGF---------QNED----------RTLW-EATSTYV----------------E--MS-----------PFM 824 (954)
Q Consensus 798 ----~~~~~~---------~~~~----------~~~~-~~~~~~~----------------~--~s-----------p~~ 824 (954)
.....+ .... ...- +..+.|. . .. ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 1b6g_A 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAIS 242 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred hhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhh
Confidence 000000 0000 0000 0000000 0 00 012
Q ss_pred ccC-CCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 825 SAN-KLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 825 ~~~-~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
.+. ++++|+|+++|++|..+| ..+.++.+.+... ....++++++||... . ..+.+.+.|.+||.+
T Consensus 243 ~l~~~i~~P~Lvi~G~~D~~~~---~~~~~~~~~ip~~--~~~~i~~~~~GH~~~-~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 243 FWQNDWNGQTFMAIGMKDKLLG---PDVMYPMKALING--CPEPLEIADAGHFVQ-E-FGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHTCCSEEEEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSCGG-G-GHHHHHHHHHHHHHH
T ss_pred hhhccccCceEEEeccCcchhh---hHHHHHHHhcccc--cceeeecCCcccchh-h-ChHHHHHHHHHHHhc
Confidence 345 899999999999999864 5666776666433 223333499999875 4 788899999999975
No 283
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.48 E-value=1.5e-12 Score=137.80 Aligned_cols=213 Identities=14% Similarity=0.135 Sum_probs=129.9
Q ss_pred eEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCC--------C
Q 002194 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT--------T 721 (954)
Q Consensus 650 ~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~--------~ 721 (954)
..+.+.||+|.+- ++|.|+||.+||+. + .+.+||+|+..++ .
T Consensus 90 ~~~~~~i~lP~~~----~~p~Pvii~i~~~~----------------~----------~~~~G~a~~~~~~~~v~~~~~~ 139 (375)
T 3pic_A 90 ISFTVTITYPSSG----TAPYPAIIGYGGGS----------------L----------PAPAGVAMINFNNDNIAAQVNT 139 (375)
T ss_dssp EEEEEEEECCSSS----CSSEEEEEEETTCS----------------S----------CCCTTCEEEEECHHHHSCCSSG
T ss_pred eEEEEEEECCCCC----CCCccEEEEECCCc----------------c----------ccCCCeEEEEecccccccccCC
Confidence 4688999999752 35799999999841 1 0357899988443 2
Q ss_pred CCCCCCCcccc-----h--hhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEecc
Q 002194 722 PIIGEGDEEAN-----D--RFVEQLVACAEAAVEEVVRRG--VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (954)
Q Consensus 722 ~~~G~G~~~~~-----~--~~~~~~~~D~~~av~~l~~~~--~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (954)
++.|+|. +.. . ........|+.++++||..++ .||++||+|+|||+||.+|+++++.+ ++|+++|+.++
T Consensus 140 gs~g~g~-f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~ 217 (375)
T 3pic_A 140 GSRGQGK-FYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQES 217 (375)
T ss_dssp GGTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESC
T ss_pred CCcccee-cccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccC
Confidence 2334442 110 0 112334579999999999998 99999999999999999999999999 68999999886
Q ss_pred CCCCCCC--------CCCCccc------cchhhhcHHHHHhcC------ccc---ccCC-CCCCEEEEEeCCCCCCCCch
Q 002194 793 AYNRTLT--------PFGFQNE------DRTLWEATSTYVEMS------PFM---SANK-LKKPILLVHGEEDNNSGTLT 848 (954)
Q Consensus 793 ~~~~~~~--------~~~~~~~------~~~~~~~~~~~~~~s------p~~---~~~~-~~~P~Lii~G~~D~~v~~~~ 848 (954)
..+-... .++.... ....|-.+ .|..+. |++ .++- ...|+||+.| .|..++ +
T Consensus 218 g~~G~~~~R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~-~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~--~ 293 (375)
T 3pic_A 218 GAGGSACWRISDYLKSQGANIQTASEIIGEDPWFST-TFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLG--P 293 (375)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCSCSCG-GGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGC--H
T ss_pred CCCchhhhhhhhhhcccCccccccccccCccccccc-chhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccC--c
Confidence 4331110 0000000 00112111 111111 111 1111 2579999999 888877 6
Q ss_pred HHHHHHHHHH----HhCC--CcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcccCC
Q 002194 849 MQSDRFFNAL----KGHG--ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (954)
Q Consensus 849 ~~~~~~~~~l----~~~g--~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (954)
......+.++ +..| .++.+.+..+.+|.....+ ..+.+.+||++||++..
T Consensus 294 ~g~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~fp~~----~~~~~~~F~~k~L~~~~ 349 (375)
T 3pic_A 294 QSCFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAFPSN----QQSQLTAFVQKFLLGQS 349 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCCCGG----GHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHcCCccceEEEeeCCCccccCCHH----HHHHHHHHHHHHhCCCC
Confidence 5544333333 3344 3567654334455322222 24678999999998743
No 284
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.48 E-value=6.9e-12 Score=142.95 Aligned_cols=305 Identities=10% Similarity=0.064 Sum_probs=172.0
Q ss_pred CcccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEec-CCeEEEEEecCCC
Q 002194 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLLR 266 (954)
Q Consensus 189 ~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~~ 266 (954)
..+..++|+| +++.||... ....|.++|+++++...+....+ ....+..++|+| |+++|+...
T Consensus 120 ~~V~~l~~~P~~~~~lasGs---------~dg~i~lWd~~~~~~~~~~~~~g--H~~~V~~l~f~p~~~~~l~s~s---- 184 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGS---------KGGDIMLWNFGIKDKPTFIKGIG--AGGSITGLKFNPLNTNQFYASS---- 184 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEE---------TTSCEEEECSSCCSCCEEECCCS--SSCCCCEEEECSSCTTEEEEEC----
T ss_pred CCEEEEEEeCCCCCEEEEEe---------CCCEEEEEECCCCCceeEEEccC--CCCCEEEEEEeCCCCCEEEEEe----
Confidence 3688899999 456676643 24567777887765433322111 112278999998 688887651
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC----ccccccccCC
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP----AVYTSLDPSP 341 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~----~~~~~~~~Sp 341 (954)
. ...|.++|+ ++..+.+... ..+..++|+|
T Consensus 185 -----------------~----------------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 185 -----------------M----------------------------EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp -----------------S----------------------------SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET
T ss_pred -----------------C----------------------------CCEEEEeeccCCceeEEeccCCCCccEEEEEECC
Confidence 1 123556677 4444443322 3456789999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~ 421 (954)
||+.|+..+.+ +.|.+||++++....+..+ ...+..++|+|+++.+++..
T Consensus 220 ~~~~l~~g~~d-------------g~i~~wd~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~~~s~---- 269 (435)
T 4e54_B 220 SSRMVVTGDNV-------------GNVILLNMDGKELWNLRMH-------------KKKVTHVALNPCCDWFLATA---- 269 (435)
T ss_dssp TTTEEEEECSS-------------SBEEEEESSSCBCCCSBCC-------------SSCEEEEEECTTCSSEEEEE----
T ss_pred CCCEEEEEeCC-------------CcEeeeccCcceeEEEecc-------------cceEEeeeecCCCceEEEEe----
Confidence 99999887643 3899999987654433322 24457899999998766541
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEE---eecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEIL---HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l---~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 498 (954)
+..+.|.+|++ ........+ ..+...+..++|+|||++|+..+.++. |.++++.++. .+..+
T Consensus 270 --------s~d~~v~iwd~--~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~----i~iwd~~~~~-~~~~~ 334 (435)
T 4e54_B 270 --------SVDQTVKIWDL--RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE----IRVYSASQWD-CPLGL 334 (435)
T ss_dssp --------ETTSBCCEEET--TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC----EEEEESSSSS-SEEEE
T ss_pred --------cCcceeeEEec--ccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE----EEEEECCCCc-cceEE
Confidence 22446778886 222222222 344566788999999999988765543 4445555542 22222
Q ss_pred ecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccce
Q 002194 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (954)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 578 (954)
...... ...........|+|++..++...... +..++.. ..+...|++||..+|+.......... ..
T Consensus 335 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~------~~~~~~i~iwd~~~g~~~~~l~~~~~---~~ 401 (435)
T 4e54_B 335 IPHPHR-HFQHLTPIKAAWHPRYNLIVVGRYPD---PNFKSCT------PYELRTIDVFDGNSGKMMCQLYDPES---SG 401 (435)
T ss_dssp CCCCCC-CCSSSCCCBCEECSSSSCEEEECCCC---TTSCCSS------TTCCCCEEEECSSSCCEEEEECCSSC---CC
T ss_pred eccccc-ccccceeEEEEEcCCCCEEEEEEcCC---CCeEEEE------ecCCCEEEEEECCCCcEEEEEeCCCC---Cc
Confidence 211111 00000111156889988877765321 1111111 11223589999998876544322211 00
Q ss_pred eEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCcee
Q 002194 579 TVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (954)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~ 622 (954)
+..+ ..|+|||+.|+. .. -..|++|++.+|+.+
T Consensus 402 v~s~------~~fspdg~~las-g~----d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 402 ISSL------NEFNPMGDTLAS-AM----GYHILIWSQQEARTR 434 (435)
T ss_dssp CCCE------EEECTTSSCEEE-EC----SSEEEECCCC-----
T ss_pred EEEE------EEECCCCCEEEE-Ec----CCcEEEEECCcCeee
Confidence 1111 258999987653 22 236999998887654
No 285
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.47 E-value=5.3e-12 Score=153.21 Aligned_cols=238 Identities=14% Similarity=0.095 Sum_probs=149.0
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCC-C-ceeeeecCC
Q 002194 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-G-QEIEIQGFP 186 (954)
Q Consensus 110 ~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~-~-~~~~lt~~~ 186 (954)
.+..++|+|++ +.|+..+.+ ..|.+|++..+... + ..+.+.++.
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D---------------------------------~~i~~W~~~~~~~~~~~~~~~~~~h~ 430 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRD---------------------------------KSIILWKLTKDDKAYGVAQRRLTGHS 430 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETT---------------------------------SEEEEEECCCSTTCSCEEEEEEECCS
T ss_pred eeEEEEecCCCCCEEEEEeCC---------------------------------CcEEEEEccCCCcccccccceecCCC
Confidence 35677888876 456666654 57999998643211 1 123454433
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCC
Q 002194 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (954)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (954)
..+..+.|||||+.|+..+. ...|.++|+.+++..+........ +..++|+|||+.|+...
T Consensus 431 --~~v~~v~~s~~g~~l~sgs~---------Dg~v~vwd~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s---- 491 (694)
T 3dm0_A 431 --HFVEDVVLSSDGQFALSGSW---------DGELRLWDLAAGVSTRRFVGHTKD----VLSVAFSLDNRQIVSAS---- 491 (694)
T ss_dssp --SCEEEEEECTTSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEE----
T ss_pred --CcEEEEEECCCCCEEEEEeC---------CCcEEEEECCCCcceeEEeCCCCC----EEEEEEeCCCCEEEEEe----
Confidence 46888999999999987552 567888898887664443333222 77899999999988761
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCC----C-ccccccccC
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP----P-AVYTSLDPS 340 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~----~-~~~~~~~~S 340 (954)
. ...|.+++. ......+.. . ..+..++|+
T Consensus 492 -----------------~----------------------------D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 492 -----------------R----------------------------DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp -----------------T----------------------------TSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred -----------------C----------------------------CCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 1 123445555 332222221 1 456788999
Q ss_pred CCCc--EEEEEeecCCcccccccCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002194 341 PDEK--YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (954)
Q Consensus 341 pDGk--~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~ 417 (954)
|++. .|+..+. ++.|.+||+.+.+.. .+..+ ...+..++|+|||+.++..
T Consensus 527 ~~~~~~~l~s~s~-------------d~~v~vwd~~~~~~~~~~~~h-------------~~~v~~v~~spdg~~l~sg- 579 (694)
T 3dm0_A 527 PNTLQPTIVSASW-------------DKTVKVWNLSNCKLRSTLAGH-------------TGYVSTVAVSPDGSLCASG- 579 (694)
T ss_dssp SCSSSCEEEEEET-------------TSCEEEEETTTCCEEEEECCC-------------SSCEEEEEECTTSSEEEEE-
T ss_pred CCCCcceEEEEeC-------------CCeEEEEECCCCcEEEEEcCC-------------CCCEEEEEEeCCCCEEEEE-
Confidence 9984 4555552 238999999865543 33322 2345789999999876654
Q ss_pred EeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+..+.|.+|++ ..++..........+..++||||+..|+.... + .|.++|+.++
T Consensus 580 ------------~~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~----~i~iwd~~~~ 633 (694)
T 3dm0_A 580 ------------GKDGVVLLWDL---AEGKKLYSLEANSVIHALCFSPNRYWLCAATE-H----GIKIWDLESK 633 (694)
T ss_dssp ------------ETTSBCEEEET---TTTEEEECCBCSSCEEEEEECSSSSEEEEEET-T----EEEEEETTTT
T ss_pred ------------eCCCeEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEEEEcC-C----CEEEEECCCC
Confidence 34567889996 33332222233445677999999988776542 2 2555566553
No 286
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.47 E-value=1.7e-11 Score=140.00 Aligned_cols=177 Identities=10% Similarity=0.127 Sum_probs=103.9
Q ss_pred ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc-CceEEEeccCCCcccCCccccccccCccceeeccCC
Q 002194 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (954)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~-g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg 410 (954)
..+..++|+|||++|+.. .+ +.+.+||++ ++....+.... +..+......+..++|+|||
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d-------------~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD-------------LRINLWHLEITDRSFNIVDIK-----PANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS-------------SEEEEEETTEEEEEEEEEECC-----CSSGGGCCCCEEEEEECSSC
T ss_pred cceEEEEEcCCCCEEEEe-CC-------------CeEEEEECCCCCceeeeeecc-----cccccccCcceEEEEECCCC
Confidence 678899999999999875 22 289999998 33332221110 11112233456789999999
Q ss_pred -CCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC-----ceEEeeccc------------ccCceeeccCCceEEE
Q 002194 411 -PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-----PEILHKLDL------------RYGGISWCDDSLALVY 472 (954)
Q Consensus 411 -~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-----~~~l~~~~~------------~~~~~~~spDg~~l~~ 472 (954)
+.++.. +..+.|.+|++ ..++ ...+..+.. .+..++|+|||+.|+.
T Consensus 239 ~~~l~s~-------------~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 239 CNTFVYS-------------SSKGTIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp TTEEEEE-------------ETTSCEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred CcEEEEE-------------eCCCeEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE
Confidence 544443 33557889996 3333 345544433 6788999999999987
Q ss_pred EEeccccceEEEEEcCCCCCCCcEEEecCCCCCcc------CCC---CCCCeeeccCCcEEEEEEeeccCCCcEEEEecC
Q 002194 473 ESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVY------SDP---GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (954)
Q Consensus 473 ~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~------~~~---~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~ 543 (954)
... + .|.++|+... ..+......+..... ... ....+.|+|||++|+...
T Consensus 303 ~~~-~----~v~iwd~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s--------------- 361 (447)
T 3dw8_B 303 RDY-L----SVKVWDLNME-NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS--------------- 361 (447)
T ss_dssp EES-S----EEEEEETTCC-SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC---------------
T ss_pred eeC-C----eEEEEeCCCC-ccccceeeccccccccccccccccccccceEEEECCCCCEEEEec---------------
Confidence 755 2 2444455431 122222221111000 000 001168999999986654
Q ss_pred CCCCCCCCCeEEEEECCCCCeEEEecc
Q 002194 544 GATPEGNIPFLDLFDINTGSKERIWES 570 (954)
Q Consensus 544 ~~~~~~~~~~l~~~d~~~g~~~~l~~~ 570 (954)
....|++||+.+++...+...
T Consensus 362 ------~dg~v~iwd~~~~~~~~~~~~ 382 (447)
T 3dw8_B 362 ------YNNFFRMFDRNTKRDITLEAS 382 (447)
T ss_dssp ------STTEEEEEETTTCCEEEEECC
T ss_pred ------cCCEEEEEEcCCCcceeeeec
Confidence 123599999999987765443
No 287
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.47 E-value=8.3e-13 Score=139.40 Aligned_cols=196 Identities=9% Similarity=0.008 Sum_probs=124.3
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (954)
.|.||++||..... ..|. .....|+++||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 10 g~~vvllHG~~~~~-----------~~w~----~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 71 (264)
T 2wfl_A 10 QKHFVLVHGGCLGA-----------WIWY----KLKPLLESAGHKVTA---VDLSAAGINPRRLDEIHTFRDYSEPLMEV 71 (264)
T ss_dssp CCEEEEECCTTCCG-----------GGGT----THHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCcccc-----------chHH----HHHHHHHhCCCEEEE---eecCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 57899999964211 1121 345677789999999 6777888875421 2345666776666
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC-CCCC---------------CC------Cc
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR-TLTP---------------FG------FQ 804 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~-~~~~---------------~~------~~ 804 (954)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++.... .... +. +.
T Consensus 72 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
T 2wfl_A 72 MASI---PP--DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYG 146 (264)
T ss_dssp HHHS---CT--TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEES
T ss_pred HHHh---CC--CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhcc
Confidence 6554 21 258999999999999999999999999999998864211 0000 00 00
Q ss_pred ---c--c----cchh-----hh--cHH--HHH-h-cCcc----------ccc--C-CCCCCEEEEEeCCCCCCCCchHHH
Q 002194 805 ---N--E----DRTL-----WE--ATS--TYV-E-MSPF----------MSA--N-KLKKPILLVHGEEDNNSGTLTMQS 851 (954)
Q Consensus 805 ---~--~----~~~~-----~~--~~~--~~~-~-~sp~----------~~~--~-~~~~P~Lii~G~~D~~v~~~~~~~ 851 (954)
. . .... +. ..+ .+. . ..+. ... . ..++|+|+++|++|..+| ...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~ 224 (264)
T 2wfl_A 147 NPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFP--VEFQ 224 (264)
T ss_dssp CTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHH
T ss_pred CCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCC--HHHH
Confidence 0 0 0000 00 000 000 0 0010 000 1 135799999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+++.+.+.. .++++++++||... .+..+.+.+.+.+|+.
T Consensus 225 ~~~~~~~p~----~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 225 KWFVESVGA----DKVKEIKEADHMGM-LSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHCC----SEEEEETTCCSCHH-HHSHHHHHHHHHHHHC
T ss_pred HHHHHhCCC----ceEEEeCCCCCchh-hcCHHHHHHHHHHHhh
Confidence 888777643 48899999999863 5667788888888864
No 288
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.47 E-value=6.6e-14 Score=145.82 Aligned_cols=148 Identities=13% Similarity=0.102 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC------CcccEEEEeccCCCCCCCCCCCccccchhhhc
Q 002194 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP------HLFCCGIARSGAYNRTLTPFGFQNEDRTLWEA 813 (954)
Q Consensus 740 ~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p------~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (954)
..|+.+++++|.+....+..+++|+||||||.+|+.++.+.+ ..+++++.+++........ .+... ..+..
T Consensus 83 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-~~~~~--~~~~~ 159 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-EHPGE--LRITE 159 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-TSTTC--EEECG
T ss_pred hhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-ccccc--cccch
Confidence 346666667766543234468999999999999999998742 2477888887754311000 00000 00000
Q ss_pred HHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCC---CcEEEEEeCCCCCcCCCcccHHHHHHHH
Q 002194 814 TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG---ALCRLVILPFESHGYAARESIMHVLWET 890 (954)
Q Consensus 814 ~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~H~~~~~~~~~~~~~~i 890 (954)
.+. ..+..+.++++|+|++||++|.+|| +.+++++++.++..+ .....++++++||.+... ..+.+.+
T Consensus 160 --~~~--~~~~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~---~~~~~~i 230 (243)
T 1ycd_A 160 --KFR--DSFAVKPDMKTKMIFIYGASDQAVP--SVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK---KDIIRPI 230 (243)
T ss_dssp --GGT--TTTCCCTTCCCEEEEEEETTCSSSC--HHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC---HHHHHHH
T ss_pred --hHH--HhccCcccCCCCEEEEEeCCCCccC--HHHHHHHHHHhhhhccccccccEEEecCCCCcCCch---HHHHHHH
Confidence 010 1223456688999999999999999 999999999998641 112334566679987532 3578899
Q ss_pred HHHHHHhcc
Q 002194 891 DRWLQKYCV 899 (954)
Q Consensus 891 ~~fl~~~l~ 899 (954)
.+||++++.
T Consensus 231 ~~fl~~~~~ 239 (243)
T 1ycd_A 231 VEQITSSLQ 239 (243)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhh
Confidence 999999875
No 289
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.46 E-value=8.2e-13 Score=142.09 Aligned_cols=208 Identities=11% Similarity=0.052 Sum_probs=131.9
Q ss_pred eEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCc
Q 002194 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDE 729 (954)
Q Consensus 650 ~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~ 729 (954)
.+++....-|.+ ..|.||++||.+.... .|. .....|+++||.|++ .|.+|+|.+
T Consensus 33 ~~l~y~~~G~~~-------~g~~vvllHG~~~~~~-----------~w~----~~~~~L~~~g~rvia---~Dl~G~G~S 87 (297)
T 2xt0_A 33 LRMHYVDEGPRD-------AEHTFLCLHGEPSWSF-----------LYR----KMLPVFTAAGGRVVA---PDLFGFGRS 87 (297)
T ss_dssp CCEEEEEESCTT-------CSCEEEEECCTTCCGG-----------GGT----TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEccCCC-------CCCeEEEECCCCCcce-----------eHH----HHHHHHHhCCcEEEE---eCCCCCCCC
Confidence 788776654321 0367899999742211 121 235577889999999 777889988
Q ss_pred ccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC-CCCC-
Q 002194 730 EAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-PFGF- 803 (954)
Q Consensus 730 ~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-~~~~- 803 (954)
..+. .......+|+.+.++.| +.+++.|+||||||.+++.+|.++|++++++|++++....... ...+
T Consensus 88 ~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 161 (297)
T 2xt0_A 88 DKPTDDAVYTFGFHRRSLLAFLDAL------QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFE 161 (297)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHh------CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHH
Confidence 6532 23556677777777765 2358999999999999999999999999999999874311100 0000
Q ss_pred --------cccc--------c-hhh--hcHHHHH----------------hcC--------------cccccC-CCCCCE
Q 002194 804 --------QNED--------R-TLW--EATSTYV----------------EMS--------------PFMSAN-KLKKPI 833 (954)
Q Consensus 804 --------~~~~--------~-~~~--~~~~~~~----------------~~s--------------p~~~~~-~~~~P~ 833 (954)
.... . ... +....|. ..- ....+. ++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 241 (297)
T 2xt0_A 162 SWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPT 241 (297)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCE
T ss_pred HHHHHhhcccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCe
Confidence 0000 0 000 0000000 000 011345 889999
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 834 Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
|+++|++|..+| ..+.++.+.+... ....+.++++||... . ..+.+.+.|.+||.
T Consensus 242 Lvi~G~~D~~~~---~~~~~~~~~~p~~--~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 242 FMAVGAQDPVLG---PEVMGMLRQAIRG--CPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp EEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred EEEEeCCCcccC---hHHHHHHHhCCCC--eeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 999999999875 5667777666433 334344799999875 4 66788888888874
No 290
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.46 E-value=8.8e-12 Score=137.10 Aligned_cols=300 Identities=12% Similarity=0.063 Sum_probs=166.6
Q ss_pred Ccccceee-----cC-CCCeEEEEEeeccccCCCCceEEEEEECCCCc-------ee-ecccCCCccccccccceeEecC
Q 002194 189 AKLNFVTW-----SQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------AR-PLFQSPDIYLNAIFDNFVWVNN 254 (954)
Q Consensus 189 ~~~~~~~w-----SP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~-------~~-~lt~~~~~~~~~~~~~~~wspD 254 (954)
..+..+.| +| ||+.|+..+ .++...|| ++..++ .. .+..+.. .+..++|+||
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs-------~D~~v~iW--d~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~~~~ 87 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGS-------RDKTVMIW--KLYEEEQNGYFGIPHKALTGHNH-----FVSDLALSQE 87 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEE-------TTSCEEEE--EECSSCCSSBSEEEEEEECCCSS-----CEEEEEECSS
T ss_pred hhhhheeeEEEeecCCCCCEEEEEc-------CCCEEEEE--ECCcCCcccccccccchhccCCC-----ceEEEEECCC
Confidence 35778888 77 998888755 33455555 543322 11 2222222 2678999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-
Q 002194 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP- 331 (954)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~- 331 (954)
+++|+... ....|.++|+ +|+. ..+...
T Consensus 88 ~~~l~s~s-------------------------------------------------~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 88 NCFAISSS-------------------------------------------------WDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp TTEEEEEE-------------------------------------------------TTSEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEc-------------------------------------------------CCCcEEEEECCCCcEEEEEcCCC
Confidence 99888651 1234667788 6643 344444
Q ss_pred ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC
Q 002194 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (954)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~ 411 (954)
..+..++|||||++|+..+.+ +.+.+||+.+.......... .....+..++|+|+++
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAE-------------REIKLWNILGECKFSSAEKE----------NHSDWVSCVRYSPIMK 175 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETT-------------SCEEEEESSSCEEEECCTTT----------SCSSCEEEEEECCCCC
T ss_pred CcEEEEEECCCCCEEEEEcCC-------------CEEEEEeccCCceeeeeccc----------CCCceeeeeeeccccc
Confidence 778899999999999887743 38999999865443332211 1113456788999885
Q ss_pred CceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
..... ...+..-+..+..+.|.+|+. .+.....+..+...+..++|+|||++|+..+.++ .|.++|+...
T Consensus 176 ~~~~~---~~~~~~l~s~~~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg----~v~iwd~~~~ 245 (343)
T 2xzm_R 176 SANKV---QPFAPYFASVGWDGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDK----KLLIWDILNL 245 (343)
T ss_dssp SCSCC---CSSCCEEEEEETTSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTC----EEEEEESSCC
T ss_pred ccccc---CCCCCEEEEEcCCCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEcCCC----eEEEEECCCC
Confidence 31000 000000001133557888984 4333344556677788899999999998876543 2444454222
Q ss_pred CCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccC
Q 002194 492 DVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (954)
Q Consensus 492 ~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 571 (954)
..+...... ...+.. ++|+|++++++... ...+++||+.+++...+..-.
T Consensus 246 -~~~~~~~~~-~~~v~~------v~~sp~~~~la~~~----------------------d~~v~iw~~~~~~~~~~~~~~ 295 (343)
T 2xzm_R 246 -TYPQREFDA-GSTINQ------IAFNPKLQWVAVGT----------------------DQGVKIFNLMTQSKAPVCTIE 295 (343)
T ss_dssp -SSCSEEEEC-SSCEEE------EEECSSSCEEEEEE----------------------SSCEEEEESSSCCSCSEEECC
T ss_pred -cccceeecC-CCcEEE------EEECCCCCEEEEEC----------------------CCCEEEEEeCCCCCCceEEee
Confidence 122222211 111222 88999998876543 113888998876543321111
Q ss_pred ccccc--ceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002194 572 KEKYY--ETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (954)
Q Consensus 572 ~~~~~--~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~ 618 (954)
..... .........-...+|+|||+.++.... -..+.+|++.+
T Consensus 296 ~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~----Dg~v~~w~~~~ 340 (343)
T 2xzm_R 296 AEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT----DGVIRTFSFET 340 (343)
T ss_dssp CCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET----TSEEEEEEEEE
T ss_pred cCcchhhhhhcCCCCceEEEEECCCCCeEEEecC----CceEEEEEEEc
Confidence 00000 000000000012579999987765433 24577777544
No 291
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.46 E-value=4.7e-13 Score=143.95 Aligned_cols=211 Identities=10% Similarity=-0.030 Sum_probs=134.2
Q ss_pred EcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCC
Q 002194 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (954)
Q Consensus 645 ~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~ 724 (954)
...+|.++....+-+ .|+||++||.+.... .|.. ....|+ ++|.|++ .+..
T Consensus 14 ~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~~~-----------~~~~----~~~~L~-~~~~vi~---~D~~ 64 (302)
T 1mj5_A 14 IEIKGRRMAYIDEGT----------GDPILFQHGNPTSSY-----------LWRN----IMPHCA-GLGRLIA---CDLI 64 (302)
T ss_dssp EEETTEEEEEEEESC----------SSEEEEECCTTCCGG-----------GGTT----TGGGGT-TSSEEEE---ECCT
T ss_pred EEECCEEEEEEEcCC----------CCEEEEECCCCCchh-----------hhHH----HHHHhc-cCCeEEE---EcCC
Confidence 345788887665421 378999999742211 1211 122344 4589999 5666
Q ss_pred CCCCcccch------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCC
Q 002194 725 GEGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (954)
Q Consensus 725 G~G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (954)
|+|.+.... .......+|+.++++.+ +. +++.++|||+||.+++.++.++|++++++|+++|.....
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 138 (302)
T 1mj5_A 65 GMGDSDKLDPSGPERYAYAEHRDYLDALWEAL------DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPI 138 (302)
T ss_dssp TSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCB
T ss_pred CCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCch
Confidence 778775432 23455666666666554 33 689999999999999999999999999999999865311
Q ss_pred CCC-CC--C---------c----------------------cccc----hhh--------hcHHHHH----h--------
Q 002194 798 LTP-FG--F---------Q----------------------NEDR----TLW--------EATSTYV----E-------- 819 (954)
Q Consensus 798 ~~~-~~--~---------~----------------------~~~~----~~~--------~~~~~~~----~-------- 819 (954)
... .. . . .... ..+ .....+. .
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (302)
T 1mj5_A 139 EWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPA 218 (302)
T ss_dssp CGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSH
T ss_pred hhhhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccch
Confidence 000 00 0 0 0000 000 0000000 0
Q ss_pred ------cCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHH
Q 002194 820 ------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRW 893 (954)
Q Consensus 820 ------~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 893 (954)
.+....+.++++|+|+++|++|..+| +..++++.+.+ .. +++++ ++||... .++.+.+.+.|.+|
T Consensus 219 ~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~e~p~~~~~~i~~f 289 (302)
T 1mj5_A 219 DVVAIARDYAGWLSESPIPKLFINAEPGALTT--GRMRDFCRTWP----NQ-TEITV-AGAHFIQ-EDSPDEIGAAIAAF 289 (302)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS--HHHHHHHTTCS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhhccCCCeEEEEeCCCCCCC--hHHHHHHHHhc----CC-ceEEe-cCcCccc-ccCHHHHHHHHHHH
Confidence 01123456789999999999999998 77766665443 23 78888 9999864 56678899999999
Q ss_pred HHHhcc
Q 002194 894 LQKYCV 899 (954)
Q Consensus 894 l~~~l~ 899 (954)
+.+...
T Consensus 290 l~~~~~ 295 (302)
T 1mj5_A 290 VRRLRP 295 (302)
T ss_dssp HHHHSC
T ss_pred HHhhcc
Confidence 988654
No 292
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.46 E-value=2.3e-12 Score=137.67 Aligned_cols=212 Identities=11% Similarity=0.103 Sum_probs=129.7
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCC--------CC
Q 002194 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT--------TP 722 (954)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~--------~~ 722 (954)
.+.+.||+|++ ++|.|+||.+||+. + .+.+||+++..++ .+
T Consensus 124 sf~~~i~lP~g-----~~P~Pvii~~~~~~----------------~----------~~~~G~A~i~f~~~~va~d~~~g 172 (433)
T 4g4g_A 124 SFSASIRKPSG-----AGPFPAIIGIGGAS----------------I----------PIPSNVATITFNNDEFGAQMGSG 172 (433)
T ss_dssp EEEEEEECCSS-----SCCEEEEEEESCCC----------------S----------CCCTTSEEEEECHHHHSCCSSGG
T ss_pred EEEEEEECCCC-----CCCccEEEEECCCc----------------c----------ccCCCeEEEEeCCcccccccCCC
Confidence 56999999975 46799999998741 0 0356999998443 22
Q ss_pred CCCCCCcccc-----hhh--HHHHHHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEec
Q 002194 723 IIGEGDEEAN-----DRF--VEQLVACAEAAVEEVVR----RGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (954)
Q Consensus 723 ~~G~G~~~~~-----~~~--~~~~~~D~~~av~~l~~----~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (954)
+.|+|. +.. ..+ ......|+.++++||.. ++.||++||+++|+|+||..|+++++.+ ++|+++|+.+
T Consensus 173 srG~g~-f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~ 250 (433)
T 4g4g_A 173 SRGQGK-FYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQE 250 (433)
T ss_dssp GTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEES
T ss_pred cCCccc-cccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEec
Confidence 344443 211 111 23346799999999999 8899999999999999999999999999 6899999998
Q ss_pred cCCCCCCCC--------CCCccc------cchhhhcHHHHHhcC------cccc---cCC-CCCCEEEEEeCCCCCCCCc
Q 002194 792 GAYNRTLTP--------FGFQNE------DRTLWEATSTYVEMS------PFMS---ANK-LKKPILLVHGEEDNNSGTL 847 (954)
Q Consensus 792 ~~~~~~~~~--------~~~~~~------~~~~~~~~~~~~~~s------p~~~---~~~-~~~P~Lii~G~~D~~v~~~ 847 (954)
+..+-...- ++.... ....|-.+ .|..+. |+++ ++- ...|+|++.| +|..++
T Consensus 251 sg~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~-~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~-- 326 (433)
T 4g4g_A 251 SGAGGAACWRISDQQKAAGANIQTAAQIITENPWFSR-NFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLG-- 326 (433)
T ss_dssp CCTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCT-TTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTC--
T ss_pred CCCCchhhhhhchhhcccCcchhhhhcccCCccccch-hhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCC--
Confidence 643311100 000000 00111111 011110 1111 011 1579999999 887776
Q ss_pred hHHHHHHHHHHH------hCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhcccCCC
Q 002194 848 TMQSDRFFNALK------GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNTA 903 (954)
Q Consensus 848 ~~~~~~~~~~l~------~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 903 (954)
+......+.+++ ....++.+.+.++.+|.....+ ..+.+.+||++||++...
T Consensus 327 p~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~----~r~~~~~F~~k~Lkg~~~ 384 (433)
T 4g4g_A 327 PVSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSS----QNQDLNSYINYFLLGQGS 384 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGG----GHHHHHHHHHHHTTCCSC
T ss_pred cHHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHH----HHHHHHHHHHHHhCCCCC
Confidence 654443333332 2234677766555566532222 246778999999987543
No 293
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.46 E-value=7.9e-13 Score=131.91 Aligned_cols=127 Identities=14% Similarity=0.105 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHH
Q 002194 737 EQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATST 816 (954)
Q Consensus 737 ~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (954)
....+|+.++++.+ + +++.++|||+||.+++.++.++|++++++|+++|...... .+
T Consensus 59 ~~~~~~~~~~~~~~------~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~~------------- 115 (191)
T 3bdv_A 59 DRWVLAIRRELSVC------T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF---EI------------- 115 (191)
T ss_dssp HHHHHHHHHHHHTC------S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG---TC-------------
T ss_pred HHHHHHHHHHHHhc------C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc---cC-------------
Confidence 44455555554432 3 6899999999999999999999999999999998643210 00
Q ss_pred HHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcc--cHHHHHHHHHHHH
Q 002194 817 YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE--SIMHVLWETDRWL 894 (954)
Q Consensus 817 ~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~i~~fl 894 (954)
.+...+.++++|+|++||++|..+| ++.++++.+.+ +++++++++++|...... ...+.++.+.+||
T Consensus 116 ----~~~~~~~~~~~P~lii~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 184 (191)
T 3bdv_A 116 ----DDRIQASPLSVPTLTFASHNDPLMS--FTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFS 184 (191)
T ss_dssp ----TTTSCSSCCSSCEEEEECSSBTTBC--HHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHH
T ss_pred ----ccccccccCCCCEEEEecCCCCcCC--HHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHH
Confidence 0113456788999999999999998 88888888876 258899999999874321 2344457788888
Q ss_pred HHh
Q 002194 895 QKY 897 (954)
Q Consensus 895 ~~~ 897 (954)
++.
T Consensus 185 ~~~ 187 (191)
T 3bdv_A 185 EIL 187 (191)
T ss_dssp HTT
T ss_pred HHh
Confidence 764
No 294
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.46 E-value=6e-13 Score=145.54 Aligned_cols=198 Identities=12% Similarity=0.074 Sum_probs=120.9
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCC-CCCCCCCcccchhhHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT-PIIGEGDEEANDRFVEQLVACAEAAVE 748 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~-~~~G~G~~~~~~~~~~~~~~D~~~av~ 748 (954)
.|+||++||.... ...+. +-...+..| ++||.|+.++.+ +..|+|.+.. .....|+.++++
T Consensus 38 ~~~vvllHG~~~~-----------~~~~~-~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~-----~~~~~d~~~~~~ 99 (335)
T 2q0x_A 38 RRCVLWVGGQTES-----------LLSFD-YFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDH-----AHDAEDVDDLIG 99 (335)
T ss_dssp SSEEEEECCTTCC-----------TTCST-THHHHHHHH-TTTCEEEEECCGGGBTTSCSCCH-----HHHHHHHHHHHH
T ss_pred CcEEEEECCCCcc-----------ccchh-HHHHHHHHH-HCCcEEEEEeccCCCCCCCCccc-----cCcHHHHHHHHH
Confidence 5789999995210 01111 111234444 789999985432 4578888732 345678888888
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHH--hCCCcccEEEEeccCCCCCCCCCCC-----------------------
Q 002194 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLA--HAPHLFCCGIARSGAYNRTLTPFGF----------------------- 803 (954)
Q Consensus 749 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~--~~p~~~~a~v~~~~~~~~~~~~~~~----------------------- 803 (954)
++.+. .+.+++.|+||||||.+|+.++. .+|++++++|+.+|..+.....+..
T Consensus 100 ~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (335)
T 2q0x_A 100 ILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSL 177 (335)
T ss_dssp HHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTCGG
T ss_pred HHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccCccccc
Confidence 88775 34578999999999999999998 5789999999998865422000000
Q ss_pred -----ccc--cchhhhc------HHH-HH------hcCcccccCCCCCCEEEEEeCCCCCCCCchHH-HHHHHHHHHhCC
Q 002194 804 -----QNE--DRTLWEA------TST-YV------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHG 862 (954)
Q Consensus 804 -----~~~--~~~~~~~------~~~-~~------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~-~~~~~~~l~~~g 862 (954)
... ....+.. ... +. ..+....+.++++|+||+||++|.++| +.. ...+.+.+...-
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp--~~~~~~~~~~~l~~~~ 255 (335)
T 2q0x_A 178 AMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKP--SDEEVGTVLEGVRDHT 255 (335)
T ss_dssp GGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCC--CHHHHHHHHHHHHHHS
T ss_pred cchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCC--hhhhHHHHHHHHHHhc
Confidence 000 0000000 000 00 001123466789999999999999998 654 223333333321
Q ss_pred CcEE--------E-----EEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 863 ALCR--------L-----VILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 863 ~~~~--------~-----~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
...+ + +++|++|| +..+.+.+||.+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 256 GCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADED 295 (335)
T ss_dssp SSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHHH
T ss_pred CccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhhh
Confidence 1122 5 78999999 23788899998764
No 295
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=2.1e-11 Score=139.53 Aligned_cols=213 Identities=7% Similarity=-0.005 Sum_probs=124.6
Q ss_pred ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEE--eccCCCcccCCccccccccCccceeeccC
Q 002194 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE--LCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (954)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~--l~~~~~~~~~p~~~~~~~~g~~~~~wspD 409 (954)
..+..++|+|||++|++.+.. +.+++|++....... +.. +.+....+..++|+||
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~-------------g~v~~~~~~~~~~~~~~~~~----------~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKF-------------GDVYSIDINSIPEEKFTQEP----------ILGHVSMLTDVHLIKD 206 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTSCCCSSCCCCC----------SEECSSCEEEEEEEEC
T ss_pred CCceEEEEcCCCCEEEEEeCC-------------CcEEEEecCCccccccccee----------eecccCceEEEEEcCC
Confidence 567889999999999988732 378999987543221 001 1122245678999999
Q ss_pred ---CCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE-EeecccccCceeeccCCceEEEEEeccccceEEEE
Q 002194 410 ---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWV 485 (954)
Q Consensus 410 ---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~-l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~ 485 (954)
|+.++.. +..+.|++|++ ..+..... +..+...+..++|+ ||+.|+..+.++ .|.+
T Consensus 207 ~~~~~~l~s~-------------~~d~~i~vwd~--~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~----~v~v 266 (450)
T 2vdu_B 207 SDGHQFIITS-------------DRDEHIKISHY--PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD----KIFA 266 (450)
T ss_dssp TTSCEEEEEE-------------ETTSCEEEEEE--SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSS----EEEE
T ss_pred CCCCcEEEEE-------------cCCCcEEEEEC--CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCC----eEEE
Confidence 7765554 33457889986 23333334 34566778889999 999998876443 4666
Q ss_pred EcCCCCCCCcEEEecCCC--CC------------------ccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCC
Q 002194 486 ISPGSKDVAPRILFDRSS--ED------------------VYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (954)
Q Consensus 486 ~d~~~~~~~~~~l~~~~~--~~------------------~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (954)
+|+.++ +......... .. .... ..-.+.|+|||++++....
T Consensus 267 wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~~~---------------- 327 (450)
T 2vdu_B 267 WDWKTG--KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEF-AVSKIIKSKNLPFVAFFVE---------------- 327 (450)
T ss_dssp EETTTC--CEEEEEECHHHHGGGCCTTSBC----------CBCC-CEEEEEECSSSSEEEEEET----------------
T ss_pred EECCCC--cEeeeecchhhhhhhhhhcccccccccccccccceE-EEEEEEEeCCCCEEEEEEC----------------
Confidence 677665 2222221100 00 0000 0011678999998877761
Q ss_pred CCCCCCCeEEEEEC--CCC-CeEEE--eccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCc------eEEEE
Q 002194 546 TPEGNIPFLDLFDI--NTG-SKERI--WESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENT------QYYIQ 614 (954)
Q Consensus 546 ~~~~~~~~l~~~d~--~~g-~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~------~l~~~ 614 (954)
....|++|++ .++ +.+.+ ....+ .+.. .+|+|+ .+++...+...|. .+|.+
T Consensus 328 ----~d~~i~iw~~~~~~~~~l~~~~~~~~~~-----~v~~-------~~~~~~--~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 328 ----ATKCIIILEMSEKQKGDLALKQIITFPY-----NVIS-------LSAHND--EFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp ----TCSEEEEEEECSSSTTCEEEEEEEECSS-----CEEE-------EEEETT--EEEEEECCTTCCSSCCCSEEEEEE
T ss_pred ----CCCeEEEEEeccCCCCceeeccEeccCC-----ceEE-------EEecCC--cEEEEEecccCCCCCCcceEEEEE
Confidence 1235888888 443 22222 11111 1122 457774 4666666655554 88888
Q ss_pred ECCCCceeEee
Q 002194 615 SWPDKKSCQIT 625 (954)
Q Consensus 615 ~~~~g~~~~Lt 625 (954)
+..+++.+ ++
T Consensus 390 ~~~~~~~~-~~ 399 (450)
T 2vdu_B 390 NLNENSFV-VN 399 (450)
T ss_dssp ETTTTEEE-EC
T ss_pred EcCCCeEE-Ec
Confidence 87777654 55
No 296
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.45 E-value=5.6e-13 Score=140.11 Aligned_cols=197 Identities=9% Similarity=-0.049 Sum_probs=125.2
Q ss_pred cEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHH
Q 002194 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAV 747 (954)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av 747 (954)
|.||++||..... ..|. .....|+++||.|++ .|.+|+|.+.... .......+|+.+.+
T Consensus 4 ~~vvllHG~~~~~-----------~~w~----~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l 65 (257)
T 3c6x_A 4 AHFVLIHTICHGA-----------WIWH----KLKPLLEALGHKVTA---LDLAASGVDPRQIEEIGSFDEYSEPLLTFL 65 (257)
T ss_dssp CEEEEECCTTCCG-----------GGGT----THHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHTHHHHHHH
T ss_pred CcEEEEcCCccCc-----------CCHH----HHHHHHHhCCCEEEE---eCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 5789999963211 1121 356678889999999 6777888875421 23455566666555
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCC-CCCCCC-----------CCccc---------
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN-RTLTPF-----------GFQNE--------- 806 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~-~~~~~~-----------~~~~~--------- 806 (954)
+.+ + ..+++.|+||||||.+++.++.++|++++++|.+++... ...... .+...
T Consensus 66 ~~l---~--~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 3c6x_A 66 EAL---P--PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDG 140 (257)
T ss_dssp HTS---C--TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETT
T ss_pred Hhc---c--ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCC
Confidence 443 1 125899999999999999999999999999999876421 000000 00000
Q ss_pred -------c-ch-----hhh-----cHHHHHh-cCccc----------cc--CC-CCCCEEEEEeCCCCCCCCchHHHHHH
Q 002194 807 -------D-RT-----LWE-----ATSTYVE-MSPFM----------SA--NK-LKKPILLVHGEEDNNSGTLTMQSDRF 854 (954)
Q Consensus 807 -------~-~~-----~~~-----~~~~~~~-~sp~~----------~~--~~-~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (954)
. .. .+. ....... ..+.. .. .. .++|+|+++|++|..+| +..++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~~~~ 218 (257)
T 3c6x_A 141 KEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLWQ 218 (257)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHHH
T ss_pred CccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccC--HHHHHHH
Confidence 0 00 000 0000000 01100 00 11 25799999999999998 8888877
Q ss_pred HHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
.+.+. +.+++++|++||... .+..+.+.+.+.+|++++
T Consensus 219 ~~~~~----~~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 219 IENYK----PDKVYKVEGGDHKLQ-LTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHSC----CSEEEECCSCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHCC----CCeEEEeCCCCCCcc-cCCHHHHHHHHHHHHHhc
Confidence 77654 248899999999863 667788889999998764
No 297
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.45 E-value=2.4e-11 Score=133.53 Aligned_cols=290 Identities=9% Similarity=-0.024 Sum_probs=157.9
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCC
Q 002194 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (954)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (954)
.++++++++.++... ....|+++|+++++..+....+... ....++|+|||+.++++..
T Consensus 4 g~~~~~~~~~~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~~~v~~~--------- 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN---------YPNNLHVVDVASDTVYKSCVMPDKF---GPGTAMMAPDNRTAYVLNN--------- 62 (349)
T ss_dssp CCCCCTTCEEEEEEE---------TTTEEEEEETTTTEEEEEEECSSCC---SSCEEEECTTSSEEEEEET---------
T ss_pred cccccCCCEEEEEeC---------CCCeEEEEECCCCcEEEEEecCCCC---CCceeEECCCCCEEEEEeC---------
Confidence 467788776554432 2578999999988776554433310 1457899999998887610
Q ss_pred CCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCCc-------cccccccCCCC
Q 002194 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPA-------VYTSLDPSPDE 343 (954)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~~-------~~~~~~~SpDG 343 (954)
....|+++++ +|+.. .+.... ....++|||||
T Consensus 63 ---------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg 103 (349)
T 1jmx_B 63 ---------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG 103 (349)
T ss_dssp ---------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS
T ss_pred ---------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC
Confidence 2345888898 77543 332221 25678999999
Q ss_pred cEEEEEeecCCcccccccCCCCcceEEEeccCceEEE-eccCCCcccCCccccccccCccceeeccCCCCceEEEEeccC
Q 002194 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDG 422 (954)
Q Consensus 344 k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~-l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~ 422 (954)
++|++.......... .+......+++||+++++... +.... ....+..++|+|||+ +++.
T Consensus 104 ~~l~~~~~~~~~~~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~s~dg~-l~~~------ 164 (349)
T 1jmx_B 104 KEVYATVNPTQRLND-HYVVKPPRLEVFSTADGLEAKPVRTFP-----------MPRQVYLMRAADDGS-LYVA------ 164 (349)
T ss_dssp SEEEEEEEEEEECSS-CEEECCCEEEEEEGGGGGGBCCSEEEE-----------CCSSCCCEEECTTSC-EEEE------
T ss_pred CEEEEEccccccccc-ccccCCCeEEEEECCCccccceeeecc-----------CCCcccceeECCCCc-EEEc------
Confidence 999988743100000 000012489999988643211 11110 012345678999998 4442
Q ss_pred CCccccccCCCeEEEEecCCCCCCCceE-Eeeccc------------------------ccCceeeccCCceEEEEEecc
Q 002194 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLDL------------------------RYGGISWCDDSLALVYESWYK 477 (954)
Q Consensus 423 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~-l~~~~~------------------------~~~~~~~spDg~~l~~~~~~~ 477 (954)
...|+++++ .+++... +..... ....+++++|+.......
T Consensus 165 ---------~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--- 229 (349)
T 1jmx_B 165 ---------GPDIYKMDV---KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA--- 229 (349)
T ss_dssp ---------SSSEEEECT---TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC---
T ss_pred ---------cCcEEEEeC---CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc---
Confidence 123888885 4444333 221110 011123333332111100
Q ss_pred ccceEEEEEcCCCCCCCcEEEe-cCCCCCccCCCCCCCeeecc-CCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEE
Q 002194 478 TRRTRTWVISPGSKDVAPRILF-DRSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (954)
Q Consensus 478 ~~~~~l~~~d~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 555 (954)
.....++.++..++. ...+. ........+ +.++| ||++++... ..|+
T Consensus 230 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~sp~dg~~l~~~~-----------------------~~v~ 278 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGK--THTQEFADLTELYFT------GLRSPKDPNQIYGVL-----------------------NRLA 278 (349)
T ss_dssp EEEEEEEEEETTTCC--EEEEEEEECSSCEEE------EEECSSCTTEEEEEE-----------------------SEEE
T ss_pred ccceeEEEEeccCCc--EEecccccCCCccee------eEecCCCCCEEEEEc-----------------------CeEE
Confidence 011234446766642 22221 111111112 67899 999877651 1499
Q ss_pred EEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeE
Q 002194 556 LFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (954)
Q Consensus 556 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~ 623 (954)
+||+++++.......... . ...+|++||+++++. +. ...++++++.+++...
T Consensus 279 ~~d~~~~~~~~~~~~~~~-----~-------~~~~~s~dg~~l~~~--~~--~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 279 KYDLKQRKLIKAANLDHT-----Y-------YCVAFDKKGDKLYLG--GT--FNDLAVFNPDTLEKVK 330 (349)
T ss_dssp EEETTTTEEEEEEECSSC-----C-------CEEEECSSSSCEEEE--SB--SSEEEEEETTTTEEEE
T ss_pred EEECccCeEEEEEcCCCC-----c-------cceEECCCCCEEEEe--cC--CCeEEEEeccccceee
Confidence 999999887655443321 1 125789999988763 22 2789999988876443
No 298
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.45 E-value=1e-12 Score=138.59 Aligned_cols=197 Identities=13% Similarity=0.090 Sum_probs=121.0
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (954)
+.|+||++||+.... ..| ...+..| +.+|.|++ .+..|+|.+.... .......+|+.++
T Consensus 19 ~~~~vv~~HG~~~~~-----------~~~----~~~~~~l-~~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 79 (267)
T 3fla_A 19 ARARLVCLPHAGGSA-----------SFF----FPLAKAL-APAVEVLA---VQYPGRQDRRHEPPVDSIGGLTNRLLEV 79 (267)
T ss_dssp CSEEEEEECCTTCCG-----------GGG----HHHHHHH-TTTEEEEE---ECCTTSGGGTTSCCCCSHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCc-----------hhH----HHHHHHh-ccCcEEEE---ecCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 478999999963210 111 1234344 45699999 5566777764322 2344555555555
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc----ccEEEEeccCCCCCCCCCCCccc-cc-------------
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQNE-DR------------- 808 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~~~~~~~~~~~~~-~~------------- 808 (954)
++.+ +.+++.|+|||+||.+++.++.++|++ ++++|+.++.............. ..
T Consensus 80 l~~~------~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
T 3fla_A 80 LRPF------GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSD 153 (267)
T ss_dssp TGGG------TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHH
T ss_pred HHhc------CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcc
Confidence 4443 346899999999999999999999986 88888887653221110000000 00
Q ss_pred -hhhhc--------------HHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002194 809 -TLWEA--------------TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (954)
Q Consensus 809 -~~~~~--------------~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 873 (954)
....+ ...+..+.+... .++++|+|+++|++|..+| .....++.+.+.. +++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~g- 226 (267)
T 3fla_A 154 AAMLADPELLAMVLPAIRSDYRAVETYRHEPG-RRVDCPVTVFTGDHDPRVS--VGEARAWEEHTTG---PADLRVLPG- 226 (267)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHCCCCTT-CCBSSCEEEEEETTCTTCC--HHHHHGGGGGBSS---CEEEEEESS-
T ss_pred hhhccCHHHHHHHHHHHHHHHHhhhccccccc-CcCCCCEEEEecCCCCCCC--HHHHHHHHHhcCC---CceEEEecC-
Confidence 00000 011111221111 5678999999999999998 7777776655432 489999998
Q ss_pred CCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 874 SHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 874 ~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
+|... .++...+.+.|.+||++..
T Consensus 227 gH~~~-~~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 227 GHFFL-VDQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp STTHH-HHTHHHHHHHHHHHTC---
T ss_pred Cceee-ccCHHHHHHHHHHHhcccc
Confidence 99864 4556677777888877654
No 299
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.45 E-value=4.2e-13 Score=141.08 Aligned_cols=190 Identities=11% Similarity=0.022 Sum_probs=116.5
Q ss_pred EEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHH
Q 002194 672 CLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVV 751 (954)
Q Consensus 672 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~ 751 (954)
.||++||...... .|. .....| +.+|.|++ .|.+|+|.+.....+ .++ ..++.+.
T Consensus 15 ~vvllHG~~~~~~-----------~w~----~~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~---~~~---~~~~~l~ 69 (258)
T 1m33_A 15 HLVLLHGWGLNAE-----------VWR----CIDEEL-SSHFTLHL---VDLPGFGRSRGFGAL---SLA---DMAEAVL 69 (258)
T ss_dssp EEEEECCTTCCGG-----------GGG----GTHHHH-HTTSEEEE---ECCTTSTTCCSCCCC---CHH---HHHHHHH
T ss_pred eEEEECCCCCChH-----------HHH----HHHHHh-hcCcEEEE---eeCCCCCCCCCCCCc---CHH---HHHHHHH
Confidence 7889999642111 121 123344 46899999 677788887554211 111 2233343
Q ss_pred HcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCC-CCCC-Cccc--------cc--------hhh--
Q 002194 752 RRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-TPFG-FQNE--------DR--------TLW-- 811 (954)
Q Consensus 752 ~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~-~~~~-~~~~--------~~--------~~~-- 811 (954)
+. ++ +++.|+||||||.+|+.+|.++|++++++|++++...... ..+. .... .. ...
T Consensus 70 ~~--l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (258)
T 1m33_A 70 QQ--AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLAL 146 (258)
T ss_dssp TT--SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HH--hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33 34 6899999999999999999999999999999876421110 0000 0000 00 000
Q ss_pred ---------hcHH----------------------HHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHh
Q 002194 812 ---------EATS----------------------TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG 860 (954)
Q Consensus 812 ---------~~~~----------------------~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~ 860 (954)
...+ .+...+....+.++++|+|+++|++|..+| ...++.+.+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~-- 222 (258)
T 1m33_A 147 QTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKLW-- 222 (258)
T ss_dssp TSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTTC--
T ss_pred HhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCC--HHHHHHHHHhC--
Confidence 0000 001112223456789999999999999988 77665554433
Q ss_pred CCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 861 HGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 861 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
.+.++++++++||... .+..+.+.+.|.+|+.+
T Consensus 223 --~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 223 --PHSESYIFAKAAHAPF-ISHPAEFCHLLVALKQR 255 (258)
T ss_dssp --TTCEEEEETTCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred --ccceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHh
Confidence 2358899999999864 45567788888888864
No 300
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.45 E-value=3e-13 Score=154.60 Aligned_cols=68 Identities=13% Similarity=0.124 Sum_probs=54.5
Q ss_pred cccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeC-CCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILP-FESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
..+.++++|+|+++|++|..+| ++.++++.+.+. ++++++++ ++||... .+....+.+.|.+||++++
T Consensus 375 ~~l~~i~~PvLvi~G~~D~~~p--~~~~~~l~~~~p----~~~~~~i~~~~GH~~~-~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 375 EALAMITQPALIICARSDGLYS--FDEHVEMGRSIP----NSRLCVVDTNEGHDFF-VMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHTTCCSCEEEEECTTCSSSC--HHHHHHHHHHST----TEEEEECCCSCGGGHH-HHTHHHHHHHHHHHHTC--
T ss_pred HHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHCC----CcEEEEeCCCCCcchH-HhCHHHHHHHHHHHHHHhc
Confidence 4467889999999999999998 888888877764 36999999 8999864 4556778888889987654
No 301
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.44 E-value=8.8e-13 Score=143.26 Aligned_cols=212 Identities=16% Similarity=0.107 Sum_probs=134.4
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++....-+ ++.|.||++||.+.... .|. .....| +.+|.|++ .|.+|+
T Consensus 14 ~~g~~l~y~~~G~--------g~~~pvvllHG~~~~~~-----------~w~----~~~~~L-~~~~~via---~Dl~G~ 66 (316)
T 3afi_E 14 VLGSSMAYRETGA--------QDAPVVLFLHGNPTSSH-----------IWR----NILPLV-SPVAHCIA---PDLIGF 66 (316)
T ss_dssp ETTEEEEEEEESC--------TTSCEEEEECCTTCCGG-----------GGT----TTHHHH-TTTSEEEE---ECCTTS
T ss_pred eCCEEEEEEEeCC--------CCCCeEEEECCCCCchH-----------HHH----HHHHHH-hhCCEEEE---ECCCCC
Confidence 3677777665421 22358999999753211 121 123344 45699999 677788
Q ss_pred CCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC---CCCC-
Q 002194 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR---TLTP- 800 (954)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~---~~~~- 800 (954)
|.+..+. .......+|+.+.++.+ +.+++.|+||||||.+|+.+|.++|++++++|++++.... ....
T Consensus 67 G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 140 (316)
T 3afi_E 67 GQSGKPDIAYRFFDHVRYLDAFIEQR------GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHH 140 (316)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHc------CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccc
Confidence 8885432 23455666766666654 2368999999999999999999999999999998863210 0000
Q ss_pred -------------------CCCcc------------------c--cchh-hhcHHHHHh-----------------cCc-
Q 002194 801 -------------------FGFQN------------------E--DRTL-WEATSTYVE-----------------MSP- 822 (954)
Q Consensus 801 -------------------~~~~~------------------~--~~~~-~~~~~~~~~-----------------~sp- 822 (954)
+.... . .... .+..+.|.. ...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (316)
T 3afi_E 141 TEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIA 220 (316)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBT
T ss_pred hhhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhcccc
Confidence 00000 0 0000 000000100 000
Q ss_pred -------------ccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHH
Q 002194 823 -------------FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (954)
Q Consensus 823 -------------~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 889 (954)
...+.++++|+|+++|++|..+| .+.++++.+.+. ..++++++++||... .+....+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~GH~~~-~e~p~~~~~~ 293 (316)
T 3afi_E 221 GEPADVYEALQSAHAALAASSYPKLLFTGEPGALVS--PEFAERFAASLT----RCALIRLGAGLHYLQ-EDHADAIGRS 293 (316)
T ss_dssp TBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSS----SEEEEEEEEECSCHH-HHHHHHHHHH
T ss_pred ccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccC--HHHHHHHHHhCC----CCeEEEcCCCCCCch-hhCHHHHHHH
Confidence 01123578999999999999988 777777766553 368999999999864 5667788899
Q ss_pred HHHHHHHhc
Q 002194 890 TDRWLQKYC 898 (954)
Q Consensus 890 i~~fl~~~l 898 (954)
|.+||.+..
T Consensus 294 i~~fl~~~~ 302 (316)
T 3afi_E 294 VAGWIAGIE 302 (316)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhhcC
Confidence 999998764
No 302
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.44 E-value=1.1e-11 Score=133.16 Aligned_cols=247 Identities=12% Similarity=0.122 Sum_probs=148.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||||++||..+.+ ..|.||++... +......+.++ ..
T Consensus 11 ~V~~~~~s~~g~~las~s~D---------------------------------~~v~iw~~~~~-~~~~~~~l~gH--~~ 54 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSD---------------------------------KTIKIFEVEGE-THKLIDTLTGH--EG 54 (297)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEEBCSS-CBCCCEEECCC--SS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CEEEEEecCCC-CcEEEEEEccc--cC
Confidence 45678999999999998876 57999998531 11122344432 24
Q ss_pred cccceeecCC--CCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecC--CeEEEEEecCC
Q 002194 190 KLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPLL 265 (954)
Q Consensus 190 ~~~~~~wSPD--G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~~~~ 265 (954)
.+..+.|+|+ |+.|+..+. ...|.++|+++++...+..... ....+..++|+|+ |+.|+...
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~---------D~~v~iWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s--- 120 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSY---------DGKVMIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPMLLVAS--- 120 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEET---------TTEEEEEEBSSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEE---
T ss_pred CeEEEEecCCCcCCEEEEEcC---------CCEEEEEEcCCCceEEEEEeec--CCCceeEEEeCcCCCCcEEEEEE---
Confidence 6888999874 888877552 4567777877764322211110 1112678999998 78887651
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc---eeEcCCC-ccccccccC
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDPS 340 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~---~~~l~~~-~~~~~~~~S 340 (954)
....|.++++ ++. ...+... ..+..++|+
T Consensus 121 ----------------------------------------------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 121 ----------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp ----------------------------------------------TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred ----------------------------------------------CCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence 1234556666 432 2223233 567788999
Q ss_pred CC-------------CcEEEEEeecCCcccccccCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCcccee
Q 002194 341 PD-------------EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (954)
Q Consensus 341 pD-------------Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~ 405 (954)
|+ ++.|+..+.+ +.|.+||++.+. ...+.... ++...+..++
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D-------------~~v~lwd~~~~~~~~~~~~~l~----------~H~~~V~~v~ 211 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQTYVLESTLE----------GHSDWVRDVA 211 (297)
T ss_dssp CCC------------CCEEEEEETT-------------SCEEEEEEETTTTEEEEEEEEC----------CCSSCEEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCC-------------CcEEEEEEcCCCceEEEEEEec----------CCCCceEEEE
Confidence 97 4677776633 389999987542 11111111 2224567899
Q ss_pred eccCC---CCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCce-EE--eecccccCceeeccCCceEEEEEecccc
Q 002194 406 WRSDK---PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-IL--HKLDLRYGGISWCDDSLALVYESWYKTR 479 (954)
Q Consensus 406 wspDg---~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~-~l--~~~~~~~~~~~~spDg~~l~~~~~~~~~ 479 (954)
|+||+ +.++.. +..+.|.+|+++...+.... .+ ......+..++|+|||+.|+..+.++.
T Consensus 212 ~sp~~~~~~~las~-------------s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~- 277 (297)
T 2pm7_B 212 WSPTVLLRSYMASV-------------SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK- 277 (297)
T ss_dssp ECCCCSSSEEEEEE-------------ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC-
T ss_pred ECCCCCCceEEEEE-------------ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc-
Confidence 99997 333322 33457888886111111111 22 123445677899999999998876543
Q ss_pred ceEEEEEcCCC
Q 002194 480 RTRTWVISPGS 490 (954)
Q Consensus 480 ~~~l~~~d~~~ 490 (954)
.+||..+..+
T Consensus 278 -v~lw~~~~~g 287 (297)
T 2pm7_B 278 -VTLWKENLEG 287 (297)
T ss_dssp -EEEEEECTTS
T ss_pred -EEEEEECCCC
Confidence 7888876553
No 303
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.44 E-value=1.1e-12 Score=141.57 Aligned_cols=196 Identities=14% Similarity=0.025 Sum_probs=124.3
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC--CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR--GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~--G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av 747 (954)
.|.||++||..... ..| ......|+++ ||.|+. .+..|+|.+.... ...++|+.+.+
T Consensus 36 ~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~~~g~~vi~---~D~~G~G~s~~~~---~~~~~~~~~~l 94 (302)
T 1pja_A 36 YKPVIVVHGLFDSS-----------YSF----RHLLEYINETHPGTVVTV---LDLFDGRESLRPL---WEQVQGFREAV 94 (302)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHHSTTCCEEE---CCSSCSGGGGSCH---HHHHHHHHHHH
T ss_pred CCeEEEECCCCCCh-----------hHH----HHHHHHHHhcCCCcEEEE---eccCCCccchhhH---HHHHHHHHHHH
Confidence 57889999963211 111 2356677888 999999 6677887765432 23456666666
Q ss_pred HHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-cccEEEEeccCCCCCCCCCCC-----cc----------------
Q 002194 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLTPFGF-----QN---------------- 805 (954)
Q Consensus 748 ~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~~~~~~~~~~-----~~---------------- 805 (954)
..+.+.. .+++.++||||||.+++.++.++|+ +++++|++++..........+ ..
T Consensus 95 ~~~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (302)
T 1pja_A 95 VPIMAKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQ 171 (302)
T ss_dssp HHHHHHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGG
T ss_pred HHHhhcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHH
Confidence 6665553 3689999999999999999999998 799999998764321110000 00
Q ss_pred --ccchhhhc---HHHHHhcC-----------------cccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHH------
Q 002194 806 --EDRTLWEA---TSTYVEMS-----------------PFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA------ 857 (954)
Q Consensus 806 --~~~~~~~~---~~~~~~~s-----------------p~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~------ 857 (954)
.....|.. .+.+.... ....+.+++ |+|+++|++|..+| +..+..+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~--~~~~~~~~~~~~~~~~ 248 (302)
T 1pja_A 172 EFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVIT--PWQSSFFGFYDANETV 248 (302)
T ss_dssp GSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSS--SGGGGGTCEECTTCCE
T ss_pred HhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccc--hhHhhHhhhcCCcccc
Confidence 00000100 01110000 022456788 99999999999998 7777665321
Q ss_pred ------------------HHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 858 ------------------LKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 858 ------------------l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
+... .+++++++|++||... .+..+.+.+.+.+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 249 LEMEEQLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTAW-HSNRTLYETCIEPWL 301 (302)
T ss_dssp ECGGGSHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTTT-TSCHHHHHHHTGGGC
T ss_pred cchhhhhhhhhhhhchhhHhhc-CCeEEEEecCcccccc-ccCHHHHHHHHHHhc
Confidence 2122 2389999999999864 455667777776664
No 304
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.44 E-value=4.9e-12 Score=140.38 Aligned_cols=226 Identities=13% Similarity=0.095 Sum_probs=145.2
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc---eeecccCCCccccccccceeEecCCeEEEEEecCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK---ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~---~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (954)
..+..++|+|||+.|++.. ....|+++++++++ ...+..... .+..+.|+|||+.|+...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~--- 71 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICP---------NNHEVHIYEKSGNKWVQVHELKEHNG-----QVTGVDWAPDSNRIVTCG--- 71 (372)
T ss_dssp SCCCEEEECTTSSEEEEEC---------SSSEEEEEEEETTEEEEEEEEECCSS-----CEEEEEEETTTTEEEEEE---
T ss_pred CCeEEEEECCCCCEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCCCC-----cccEEEEeCCCCEEEEEc---
Confidence 3688899999999998853 25578888888875 333332222 277899999999998761
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee---EcCCC-ccccccccC
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK---EIGPP-AVYTSLDPS 340 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~---~l~~~-~~~~~~~~S 340 (954)
....|.++++ +++.. .+... ..+..++|+
T Consensus 72 ----------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 72 ----------------------------------------------TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp ----------------------------------------------TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred ----------------------------------------------CCCeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 1234667777 66422 22333 678889999
Q ss_pred CCCcEEEEEeecCCcccccccCCCCcceEEEeccCce----EEEeccCCCcccCCccccccccCccceeeccCCCCceEE
Q 002194 341 PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYW 416 (954)
Q Consensus 341 pDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~----~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~ 416 (954)
|||++|+..+.+ +.+.+|+++.+. .+.+.. .....+..+.|+||++.++..
T Consensus 106 ~~~~~l~~~~~d-------------~~v~i~d~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 106 PNEKKFAVGSGS-------------RVISICYFEQENDWWVCKHIKK------------PIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp TTSSEEEEEETT-------------SSEEEEEEETTTTEEEEEEECT------------TCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEecCCCcceeeeeeec------------ccCCCeeEEEEcCCCCEEEEE
Confidence 999999988743 378999998654 122211 112345689999999866654
Q ss_pred EEeccCCCccccccCCCeEEEEecCC----------------CCCCCceEEeecccccCceeeccCCceEEEEEeccccc
Q 002194 417 AETQDGGDAKVEVTPRDIIYTQQAEP----------------VQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (954)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~~~~~----------------~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (954)
+..+.+.+|++.. ..+.....+..+...+..+.|+|||+.|+....++
T Consensus 161 -------------~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--- 224 (372)
T 1k8k_C 161 -------------SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS--- 224 (372)
T ss_dssp -------------ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT---
T ss_pred -------------cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC---
Confidence 3345788888410 01222233345566678899999999888876443
Q ss_pred eEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEE
Q 002194 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAK 527 (954)
Q Consensus 481 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 527 (954)
.|.++|+.++ +.......+...+.. +.|+|||++++..
T Consensus 225 -~i~i~d~~~~--~~~~~~~~~~~~v~~------~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 225 -TVCLADADKK--MAVATLASETLPLLA------VTFITESSLVAAG 262 (372)
T ss_dssp -EEEEEEGGGT--TEEEEEECSSCCEEE------EEEEETTEEEEEE
T ss_pred -EEEEEECCCC--ceeEEEccCCCCeEE------EEEecCCCEEEEE
Confidence 3556666554 333333333333333 7899999877655
No 305
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.44 E-value=1.9e-11 Score=135.64 Aligned_cols=273 Identities=8% Similarity=-0.046 Sum_probs=139.6
Q ss_pred ceEEEEccCCCCCCceeeeecC--CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECC-CCceeecccCCCc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGF--PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD-TGKARPLFQSPDI 240 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~--~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~-~g~~~~lt~~~~~ 240 (954)
.|+++.+..+. ++.+.+... ........++|||||++|+.+.. . .|.+++++ +|+..++......
T Consensus 15 ~i~~~~~d~~~--g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~---------~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 15 AIFTVQFDDEK--LTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM---------K-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEEEETTT--TEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB---------T-EEEEEEEEETTEEEEEEEEECC
T ss_pred cEEEEEEECCC--CCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc---------c-eEEEEEECCCCCEEEeeEeecC
Confidence 57777663222 444444321 11125778899999998876542 1 67777765 6666544322110
Q ss_pred cccccccceeEecCCeEE-EEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEE
Q 002194 241 YLNAIFDNFVWVNNSTLL-VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (954)
Q Consensus 241 ~~~~~~~~~~wspDG~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~ 319 (954)
. ....++|+|||+.| +++... +. +....+. .+.....+.++
T Consensus 83 g---~~~~~~~spdg~~l~~~~~~~--~~------------------------------~~~~~~~---~~~~~g~v~v~ 124 (365)
T 1jof_A 83 G---HPRANDADTNTRAIFLLAAKQ--PP------------------------------YAVYANP---FYKFAGYGNVF 124 (365)
T ss_dssp S---SGGGGCTTSCCEEEEEEECSS--TT------------------------------CCEEEEE---ESSSCCEEEEE
T ss_pred C---CCccEEECCCCCEEEEEEecC--Cc------------------------------ceeccce---eecCCceEEEE
Confidence 0 13468899999964 333110 00 0000000 00001223444
Q ss_pred Ee--CCcee-EcC-----CCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc-CceEEEeccCCCcccC
Q 002194 320 SL--DGTVK-EIG-----PPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDI 390 (954)
Q Consensus 320 ~~--~G~~~-~l~-----~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~-g~~~~~l~~~~~~~~~ 390 (954)
++ +|+.. .+. .......++|||||++|++.... ...|++|+++ +++.+.+......
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~--- 189 (365)
T 1jof_A 125 SVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT------------ANKLWTHRKLASGEVELVGSVDAP--- 189 (365)
T ss_dssp EECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTSCEEEEEEEECS---
T ss_pred ccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC------------CCEEEEEEECCCCCEEEeeeEecC---
Confidence 44 45432 222 12456788999999998765422 1379999998 5655433221100
Q ss_pred CccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCce----EEeec--c----c----
Q 002194 391 PIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE----ILHKL--D----L---- 456 (954)
Q Consensus 391 p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~----~l~~~--~----~---- 456 (954)
....+++.++|||||+.+++. .. ..+.+.+++.++ .+++.. .+... . .
T Consensus 190 -----~~g~~p~~~~~spdg~~l~v~-~~-----------~~~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~ 251 (365)
T 1jof_A 190 -----DPGDHPRWVAMHPTGNYLYAL-ME-----------AGNRICEYVIDP-ATHMPVYTHHSFPLIPPGIPDRDPETG 251 (365)
T ss_dssp -----STTCCEEEEEECTTSSEEEEE-ET-----------TTTEEEEEEECT-TTCCEEEEEEEEESSCTTCCCBCTTTS
T ss_pred -----CCCCCCCEeEECCCCCEEEEE-EC-----------CCCeEEEEEEeC-CCCcEEEccceEEcCCCCcCCcccccc
Confidence 001345789999999977554 11 123555555422 233332 12111 1 1
Q ss_pred ---ccCcee-eccCCceEEEEEecccc----ceEEEEEcCCCCCCCcEEE---ecCCCCCccCCCCCCCeeecc---CCc
Q 002194 457 ---RYGGIS-WCDDSLALVYESWYKTR----RTRTWVISPGSKDVAPRIL---FDRSSEDVYSDPGSPMMRRTS---TGT 522 (954)
Q Consensus 457 ---~~~~~~-~spDg~~l~~~~~~~~~----~~~l~~~d~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~sp---dG~ 522 (954)
....++ |||||++|+.+....+. ...+|.++. ++ +...+ .......... ++|+| ||+
T Consensus 252 ~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g--~~~~~~~~~~~~~~~~~~------~a~sp~~~dg~ 322 (365)
T 1jof_A 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CG--SIEKQLFLSPTPTSGGHS------NAVSPCPWSDE 322 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TS--CEEEEEEEEECSSCCTTC------CCEEECTTCTT
T ss_pred cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CC--CEEEeeeeeecCCCCccc------ceecCCCcCCC
Confidence 355688 99999988655432210 355666653 33 33321 1111111111 67899 899
Q ss_pred EEEEEE
Q 002194 523 YVIAKI 528 (954)
Q Consensus 523 ~l~~~~ 528 (954)
+|+...
T Consensus 323 ~l~v~~ 328 (365)
T 1jof_A 323 WMAITD 328 (365)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 987765
No 306
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.43 E-value=7.3e-12 Score=141.09 Aligned_cols=271 Identities=14% Similarity=0.049 Sum_probs=160.9
Q ss_pred eceEEEEccCCCCCCc-eeeeecCCCCCcccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCc-------e-e
Q 002194 163 TGIGIHQLFPDGKLGQ-EIEIQGFPDGAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------A-R 232 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~-~~~lt~~~~~~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~-------~-~ 232 (954)
+.|.||++...+.... ...+.+ +...+..+.|+| |++.|+.... ...|.++++.++. . .
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~---------dg~v~vw~~~~~~~~~~~~~~~~ 125 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCG--HTAPVLDIAWCPHNDNVIASGSE---------DCTVMVWEIPDGGLVLPLREPVI 125 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCC--CSSCEEEEEECTTCTTEEEEEET---------TSEEEEEECCTTCCSSCBCSCSE
T ss_pred CEEEEEECccCCCCCCCCceEec--CCCCEEEEEeCCCCCCEEEEEeC---------CCeEEEEEccCCCCccccCCceE
Confidence 4789999854332111 112222 234789999999 8888877542 4567777777653 2 2
Q ss_pred ecccCCCccccccccceeEecCC-eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCcccccccccc
Q 002194 233 PLFQSPDIYLNAIFDNFVWVNNS-TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYY 311 (954)
Q Consensus 233 ~lt~~~~~~~~~~~~~~~wspDG-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~ 311 (954)
.+..+.. .+..+.|+||| ++|+...
T Consensus 126 ~~~~h~~-----~v~~~~~~p~~~~~l~s~~------------------------------------------------- 151 (402)
T 2aq5_A 126 TLEGHTK-----RVGIVAWHPTAQNVLLSAG------------------------------------------------- 151 (402)
T ss_dssp EEECCSS-----CEEEEEECSSBTTEEEEEE-------------------------------------------------
T ss_pred EecCCCC-----eEEEEEECcCCCCEEEEEc-------------------------------------------------
Confidence 2222222 26789999999 4666541
Q ss_pred ccceEEEEEe-CCce-eEc--CCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEe-ccC
Q 002194 312 ATTQLVLVSL-DGTV-KEI--GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-REL-CDL 384 (954)
Q Consensus 312 ~~~~l~~~~~-~G~~-~~l--~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l-~~~ 384 (954)
....|.++|+ +++. ..+ ... ..+..++|+|||+.|+..+.+ +.+.+||+..++. ..+ ..+
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~ 218 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------------KRVRVIEPRKGTVVAEKDRPH 218 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------------SEEEEEETTTTEEEEEEECSS
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------------CcEEEEeCCCCceeeeeccCC
Confidence 1234778888 6653 344 333 778899999999999988743 3899999986554 333 221
Q ss_pred CCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEE-e-ecccccCcee
Q 002194 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL-H-KLDLRYGGIS 462 (954)
Q Consensus 385 ~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l-~-~~~~~~~~~~ 462 (954)
.. ..+..+.|+|||+.++.... .+..+.|.+|++ ..+..+..+ . .....+..+.
T Consensus 219 ~~------------~~~~~~~~~~~~~~l~~g~~----------~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 219 EG------------TRPVHAVFVSEGKILTTGFS----------RMSERQVALWDT--KHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp CS------------SSCCEEEECSTTEEEEEEEC----------TTCCEEEEEEET--TBCSSCSEEEECCCCSSCEEEE
T ss_pred CC------------CcceEEEEcCCCcEEEEecc----------CCCCceEEEEcC--ccccCCceEEeccCCCceeEEE
Confidence 10 12457899999985444311 023558899996 233332222 2 3445567899
Q ss_pred eccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC-CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEe
Q 002194 463 WCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR-SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLN 541 (954)
Q Consensus 463 ~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~ 541 (954)
|+|||+.|+.+...++ ..++|.+. ++......+... ....+.. +.|+|||..++...
T Consensus 275 ~s~~~~~l~~~g~~dg-~i~i~d~~--~~~~~~~~l~~~~~~~~v~~------~~~sp~~~~~~s~~------------- 332 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDS-SIRYFEIT--SEAPFLHYLSMFSSKESQRG------MGYMPKRGLEVNKC------------- 332 (402)
T ss_dssp EETTTTEEEEEETTCS-CEEEEEEC--SSTTCEEEEEEECCSSCCSE------EEECCGGGSCGGGT-------------
T ss_pred EcCCCCEEEEEEcCCC-eEEEEEec--CCCcceEeecccccCCcccc------eEEecccccceecc-------------
Confidence 9999999987765443 25555554 431112223221 1222233 88999998764211
Q ss_pred cCCCCCCCCCCeEEEEECCCCCeEEE
Q 002194 542 GNGATPEGNIPFLDLFDINTGSKERI 567 (954)
Q Consensus 542 ~~~~~~~~~~~~l~~~d~~~g~~~~l 567 (954)
..+.+|++.+++.+.+
T Consensus 333 ----------~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 333 ----------EIARFYKLHERKCEPI 348 (402)
T ss_dssp ----------EEEEEEEEETTEEEEE
T ss_pred ----------eeEEEEEcCCCcEEEE
Confidence 1377788877766554
No 307
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.43 E-value=4e-11 Score=134.44 Aligned_cols=250 Identities=9% Similarity=-0.013 Sum_probs=154.8
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc-------eeecccCCCccccccccceeEecC----C--
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------ARPLFQSPDIYLNAIFDNFVWVNN----S-- 255 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~lt~~~~~~~~~~~~~~~wspD----G-- 255 (954)
..+....|+| +.|+... ....|.++++++++ ...+...... +..+.|+|| |
T Consensus 17 ~~i~~~~~~~--~~l~s~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCS---------GDGYLKVWDNKLLDNENPKDKSYSHFVHKSG-----LHHVDVLQAIERDAFE 80 (397)
T ss_dssp SCEEEEEECS--SEEEEEE---------TTSEEEEEESBCCTTCCGGGGEEEEECCTTC-----EEEEEEEEEEETTTEE
T ss_pred cCeEEEEecC--CeEEEEc---------CCCEEEEEECCCcccccCCCcceEEecCCCc-----EEEEEEecccccCCcc
Confidence 4688899999 6666654 24678888888876 3444322222 678999999 9
Q ss_pred -eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc------eeE
Q 002194 256 -TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT------VKE 327 (954)
Q Consensus 256 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~------~~~ 327 (954)
+.|+... ....|.++++ +++ ...
T Consensus 81 ~~~l~s~~-------------------------------------------------~dg~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTS-------------------------------------------------FSGDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEE-------------------------------------------------TTSCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEc-------------------------------------------------CCCCEEEEEccCCccccccccee
Confidence 8888761 1133666666 444 455
Q ss_pred cCCC------ccccccccC----CCCcE-EEEEeecCCcccccccCCCCcceEEEeccC------ceE-E-----EeccC
Q 002194 328 IGPP------AVYTSLDPS----PDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDG------IFV-R-----ELCDL 384 (954)
Q Consensus 328 l~~~------~~~~~~~~S----pDGk~-l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g------~~~-~-----~l~~~ 384 (954)
+... ..+..++|+ |||+. |+..+.+ +.+.+||+.. +.. . .+...
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------GTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------CcEEEEeCCccccccccceeeccCcceeeee
Confidence 5443 567789999 99999 7777633 3899999886 321 1 11100
Q ss_pred CCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEee---c---ccc
Q 002194 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHK---L---DLR 457 (954)
Q Consensus 385 ~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~---~---~~~ 457 (954)
.. ........+..++|+||| .++.. ...+.|.+|++ ..++. ..+.. + ...
T Consensus 179 ---~~---~~~~~~~~i~~~~~~~~~-~l~~~-------------~~dg~i~i~d~---~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 179 ---VE---SPMTPSQFATSVDISERG-LIATG-------------FNNGTVQISEL---STLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp ---EC---CSSSSCCCCCEEEECTTS-EEEEE-------------CTTSEEEEEET---TTTEEEEEEECCC---CCCCC
T ss_pred ---ec---cccCCCCCceEEEECCCc-eEEEE-------------eCCCcEEEEEC---CCCceeEEEeccccccccCCc
Confidence 00 000112445789999999 44443 34568999996 33333 33444 4 667
Q ss_pred cCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC-------------CCCCccCCCCCCCeeeccCCcEE
Q 002194 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR-------------SSEDVYSDPGSPMMRRTSTGTYV 524 (954)
Q Consensus 458 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-------------~~~~~~~~~~~~~~~~spdG~~l 524 (954)
+..++|+||++.|+....++. ...|.++|+.++ +....... ....+.. +.|+|||++|
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~-~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~l 306 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNS-FGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMS------LSFNDSGETL 306 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETT-EEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEE------EEECSSSSEE
T ss_pred cceEEECCCCCEEEEEecCCC-CceEEEEECCCC--cccceeccCcccccccccccccCCcEEE------EEECCCCCEE
Confidence 888999999999988765421 135777777764 33333332 2222333 7899999988
Q ss_pred EEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEec
Q 002194 525 IAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (954)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 569 (954)
+.... ...|++||+.+++......
T Consensus 307 ~~~~~---------------------dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 307 CSAGW---------------------DGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEET---------------------TSEEEEEETTTTEEEEEEE
T ss_pred EEEeC---------------------CCeEEEEEcCCCceeEEEe
Confidence 87652 2359999999887665554
No 308
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.43 E-value=4.5e-11 Score=134.54 Aligned_cols=281 Identities=11% Similarity=0.119 Sum_probs=177.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
......|++ +.++.... ...|+++++++++...+...... ..+..++|+|||+.|++..
T Consensus 95 ~~~~~~~s~--~~l~~~~~---------d~~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~------- 153 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVAL---------ERNVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGL------- 153 (401)
T ss_dssp TCBCEEECT--TSEEEEEE---------TTEEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEE-------
T ss_pred eEEEEeecC--CCEEEEEC---------CCeEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEEC-------
Confidence 455677775 44555442 56799999999887766554221 1277899999999998761
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l 346 (954)
..+.|.++++ +++ ...+... ..+..++| +++.|
T Consensus 154 ------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 189 (401)
T 4aez_A 154 ------------------------------------------GNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL 189 (401)
T ss_dssp ------------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred ------------------------------------------CCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence 1234677787 554 4444444 66777778 56777
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccC-c-eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDG-I-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g-~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
+..+.+ +.+.+||+.. + ....+..+. ..+..+.|+|||+.++..
T Consensus 190 ~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~s~-------- 235 (401)
T 4aez_A 190 SSGSRS-------------GAIHHHDVRIANHQIGTLQGHS-------------SEVCGLAWRSDGLQLASG-------- 235 (401)
T ss_dssp EEEETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEcCC-------------CCEEEEecccCcceeeEEcCCC-------------CCeeEEEEcCCCCEEEEE--------
Confidence 777633 3899999983 3 233333321 345679999999876665
Q ss_pred ccccccCCCeEEEEecCCCCCCC-ceEEeecccccCceeeccCCceEEEEEe--ccccceEEEEEcCCCCCCCcEEEecC
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESW--YKTRRTRTWVISPGSKDVAPRILFDR 501 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~--~~~~~~~l~~~d~~~~~~~~~~l~~~ 501 (954)
+..+.|.+|++ ..++ ...+..+...+..++|+|++..+++... .+ ..|.++|+.++ +.......
T Consensus 236 -----~~d~~v~iwd~---~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~~--~~~~~~~~ 302 (401)
T 4aez_A 236 -----GNDNVVQIWDA---RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAATG--ARVNTVDA 302 (401)
T ss_dssp -----ETTSCEEEEET---TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTTC--CEEEEEEC
T ss_pred -----eCCCeEEEccC---CCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCCC--CEEEEEeC
Confidence 33568999996 4333 3445566777889999999988887754 23 35777777765 33333322
Q ss_pred CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEE
Q 002194 502 SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVA 581 (954)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 581 (954)
. ..+.. +.|+|+|+.++..... ....|++||+.+++...+..-.+..
T Consensus 303 ~-~~v~~------~~~s~~~~~l~~~~g~-------------------~dg~i~v~~~~~~~~~~~~~~~~h~------- 349 (401)
T 4aez_A 303 G-SQVTS------LIWSPHSKEIMSTHGF-------------------PDNNLSIWSYSSSGLTKQVDIPAHD------- 349 (401)
T ss_dssp S-SCEEE------EEECSSSSEEEEEECT-------------------TTCEEEEEEEETTEEEEEEEEECCS-------
T ss_pred C-CcEEE------EEECCCCCeEEEEeec-------------------CCCcEEEEecCCccceeEEEecCCC-------
Confidence 1 22333 7899999998886410 1235999999887666553321110
Q ss_pred eccCCccccccccCCEEEEEEecCCCCceEEEEECCCCce
Q 002194 582 LMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (954)
Q Consensus 582 ~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~ 621 (954)
..-...+|+|||+.++.... ...+.+|++.+++.
T Consensus 350 --~~v~~~~~s~dg~~l~s~~~----dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 350 --TRVLYSALSPDGRILSTAAS----DENLKFWRVYDGDH 383 (401)
T ss_dssp --SCCCEEEECTTSSEEEEECT----TSEEEEEECCC---
T ss_pred --CCEEEEEECCCCCEEEEEeC----CCcEEEEECCCCcc
Confidence 00112578999987764332 35799999877754
No 309
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.43 E-value=2.6e-12 Score=126.91 Aligned_cols=169 Identities=13% Similarity=-0.036 Sum_probs=110.7
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCc---EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF---AILGGPTTPIIGEGDEEANDRFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~---~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~a 746 (954)
.|+||++||..... ..| ..+...|+++|| .|+. .+..|+|.+.. ...+++.+.
T Consensus 3 ~~~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~~~~v~~---~d~~g~g~s~~------~~~~~~~~~ 58 (181)
T 1isp_A 3 HNPVVMVHGIGGAS-----------FNF----AGIKSYLVSQGWSRDKLYA---VDFWDKTGTNY------NNGPVLSRF 58 (181)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHTTCCGGGEEE---CCCSCTTCCHH------HHHHHHHHH
T ss_pred CCeEEEECCcCCCH-----------hHH----HHHHHHHHHcCCCCccEEE---EecCCCCCchh------hhHHHHHHH
Confidence 47799999963111 111 245667888998 5888 55566666532 122333333
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC--CCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCccc
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFM 824 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 824 (954)
++.+.+. .+.+++.++||||||.+++.++.++ |++++++|++++........ .+ ....
T Consensus 59 ~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~-~~--------------~~~~--- 118 (181)
T 1isp_A 59 VQKVLDE--TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK-AL--------------PGTD--- 118 (181)
T ss_dssp HHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB-CC--------------CCSC---
T ss_pred HHHHHHH--cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccccc-cC--------------CCCC---
Confidence 4334333 2446899999999999999999987 88999999999864321110 00 0000
Q ss_pred ccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 825 SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 825 ~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
...++|+|++||++|..|| +..++ -...+++++++++|.... ++ ..+.+.+.+||.+.
T Consensus 119 --~~~~~p~l~i~G~~D~~v~--~~~~~---------~~~~~~~~~~~~gH~~~~-~~-~~~~~~i~~fl~~~ 176 (181)
T 1isp_A 119 --PNQKILYTSIYSSADMIVM--NYLSR---------LDGARNVQIHGVGHIGLL-YS-SQVNSLIKEGLNGG 176 (181)
T ss_dssp --TTCCCEEEEEEETTCSSSC--HHHHC---------CBTSEEEEESSCCTGGGG-GC-HHHHHHHHHHHTTT
T ss_pred --CccCCcEEEEecCCCcccc--ccccc---------CCCCcceeeccCchHhhc-cC-HHHHHHHHHHHhcc
Confidence 1235799999999999998 65321 233588899999998753 33 36778888888654
No 310
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.43 E-value=8.2e-12 Score=138.64 Aligned_cols=262 Identities=8% Similarity=-0.014 Sum_probs=141.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
....++|||||++|+.+..+ .|.+|++..+ ++...+...+.+.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~----------------------------------~v~~~~~~~~---g~~~~~~~~~~~g 83 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK----------------------------------KWSSFAVKSP---TEIVHEASHPIGG 83 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT----------------------------------EEEEEEEEET---TEEEEEEEEECCS
T ss_pred CCcEEEECCCCCEEEEEccc----------------------------------eEEEEEECCC---CCEEEeeEeecCC
Confidence 45678999999988765542 5778887422 3333332221112
Q ss_pred cccceeecCCCCe-EEEEEeecc---ccC----CCCceEEEEEECCCCcee-eccc---CCCccccccccceeEecCCeE
Q 002194 190 KLNFVTWSQDGKH-LAFSIRIDA---EDS----SSSKLRVWVADVDTGKAR-PLFQ---SPDIYLNAIFDNFVWVNNSTL 257 (954)
Q Consensus 190 ~~~~~~wSPDG~~-iaf~~~~~~---~~~----~~~~~~l~~~d~~~g~~~-~lt~---~~~~~~~~~~~~~~wspDG~~ 257 (954)
....++|||||++ ++|+...+. ... .++...+|.++.+ |+.. .+.. .... .+..++|+|||++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~-g~~~~~~~~~~~~~~~----~~~~~~~spdG~~ 158 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET-GKLEKNVQNYEYQENT----GIHGMVFDPTETY 158 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT-CCEEEEEEEEECCTTC----CEEEEEECTTSSE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC-CcCcceEeeEEeCCCC----cceEEEECCCCCE
Confidence 3567899999997 345432000 000 2233445544433 4432 2221 0111 1558899999998
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe--CCceeEc---C--C
Q 002194 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEI---G--P 330 (954)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~--~G~~~~l---~--~ 330 (954)
|+++.. +...|+++++ +|+...+ . .
T Consensus 159 l~~~~~------------------------------------------------~~~~v~~~~~~~~g~~~~~~~~~~~~ 190 (365)
T 1jof_A 159 LYSADL------------------------------------------------TANKLWTHRKLASGEVELVGSVDAPD 190 (365)
T ss_dssp EEEEET------------------------------------------------TTTEEEEEEECTTSCEEEEEEEECSS
T ss_pred EEEEcC------------------------------------------------CCCEEEEEEECCCCCEEEeeeEecCC
Confidence 876510 2235777777 3654322 1 1
Q ss_pred -CccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc--CceEE----EeccCCCcccCCcccccccc----
Q 002194 331 -PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD--GIFVR----ELCDLPLAEDIPIAFNSVRK---- 399 (954)
Q Consensus 331 -~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~--g~~~~----~l~~~~~~~~~p~~~~~~~~---- 399 (954)
......++|||||++|++..... +.+.+|+.+ +++.. .+...+.. +.+...
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~------------~~v~v~~~~~~~g~~~~~~~~~~~~~~~------~~g~~~~~~~ 252 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAG------------NRICEYVIDPATHMPVYTHHSFPLIPPG------IPDRDPETGK 252 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTTCCEEEEEEEEESSCTT------CCCBCTTTSS
T ss_pred CCCCCCEeEECCCCCEEEEEECCC------------CeEEEEEEeCCCCcEEEccceEEcCCCC------cCCccccccc
Confidence 24567789999999998776322 267777654 34322 23222211 000000
Q ss_pred --Ccccee-eccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe---e-cccccCceeecc---CCce
Q 002194 400 --GMRSIN-WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH---K-LDLRYGGISWCD---DSLA 469 (954)
Q Consensus 400 --g~~~~~-wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~---~-~~~~~~~~~~sp---Dg~~ 469 (954)
.+..++ |||||+.|+.. +...+. ...+.|.+|+++ ..++.+.+. . .......++||| ||++
T Consensus 253 ~~~~~~i~~~spdG~~l~v~-~~~~~~------~~~~~i~v~~~~--~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~ 323 (365)
T 1jof_A 253 GLYRADVCALTFSGKYMFAS-SRANKF------ELQGYIAGFKLR--DCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW 323 (365)
T ss_dssp BSEEEEEEEECTTSSEEEEE-EEESST------TSCCEEEEEEEC--TTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE
T ss_pred ccccccEEEECCCCCEEEEE-CCCCCC------CCCCeEEEEEEC--CCCCEEEeeeeeecCCCCcccceecCCCcCCCE
Confidence 245789 99999976443 221110 012367777762 234554321 1 233467789999 8999
Q ss_pred EEEEEeccccceEEEEEcCC
Q 002194 470 LVYESWYKTRRTRTWVISPG 489 (954)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~ 489 (954)
|+++...++ ...||.++.+
T Consensus 324 l~v~~~~~~-~v~v~~~~~~ 342 (365)
T 1jof_A 324 MAITDDQEG-WLEIYRWKDE 342 (365)
T ss_dssp EEEECSSSC-EEEEEEEETT
T ss_pred EEEEEcCCC-eEEEEEEchh
Confidence 887754332 3566666543
No 311
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.42 E-value=1.1e-11 Score=136.50 Aligned_cols=302 Identities=8% Similarity=-0.008 Sum_probs=172.3
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecC---CeEEEEEecCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN---STLLVCTIPLL 265 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD---G~~l~~~~~~~ 265 (954)
..+..+.|+|||+.++.+... ..+...|.++++++++...+..... ...+..+.|+|+ |+.|+...
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~-----~~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~--- 87 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNF-----ARGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGD--- 87 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC-------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEE---
T ss_pred CceEEEEEcCCCceEEEecCc-----cCCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEec---
Confidence 468899999999888876521 1125678888888877654432111 112678999999 68888661
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--eeEcCCC-cccccc----
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP-AVYTSL---- 337 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--~~~l~~~-~~~~~~---- 337 (954)
....|.++++ +++ ...+... ..+..+
T Consensus 88 ----------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 88 ----------------------------------------------FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp ----------------------------------------------TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred ----------------------------------------------CCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 1234666676 443 3444433 444444
Q ss_pred --ccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCcccee----eccC
Q 002194 338 --DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSIN----WRSD 409 (954)
Q Consensus 338 --~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~----wspD 409 (954)
+|||||+.|+..+.+ +.+.+||+..+. ...+........ ..+..+. |+||
T Consensus 122 ~~~~s~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRD-------------GTVKVWDPRQKDDPVANMEPVQGENK---------RDCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETT-------------SCEEEECTTSCSSCSEEECCCTTSCC---------CCEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCC-------------CeEEEEeCCCCCCcceeccccCCCCC---------CceEEEEEEeccCCC
Confidence 789999999988743 389999998543 344433221111 1223444 8899
Q ss_pred CCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeecc---CCceEEEEEeccccceEEEEE
Q 002194 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCD---DSLALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~sp---Dg~~l~~~~~~~~~~~~l~~~ 486 (954)
++.++.. ...+.|.+|++ ..++..........+..+.|+| ++..|+....++. ..+|.+
T Consensus 180 ~~~l~~~-------------~~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~--i~i~d~ 241 (357)
T 3i2n_A 180 ERVVCAG-------------YDNGDIKLFDL---RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK--FHVFDM 241 (357)
T ss_dssp CCEEEEE-------------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE--EEEEEE
T ss_pred CCEEEEE-------------ccCCeEEEEEC---ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe--EEEEeC
Confidence 9876665 33568999996 5555555566677788999999 9998888764432 455554
Q ss_pred cCCCCCCCcEE---EecCCCCCccCCCCCCCeeeccCCcE-EEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002194 487 SPGSKDVAPRI---LFDRSSEDVYSDPGSPMMRRTSTGTY-VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (954)
Q Consensus 487 d~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 562 (954)
..... .... ........+.. +.|+|+|+. ++... ....|++||+..+
T Consensus 242 ~~~~~--~~~~~~~~~~~~~~~v~~------~~~~~~~~~~l~~~~---------------------~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 242 RTQHP--TKGFASVSEKAHKSTVWQ------VRHLPQNRELFLTAG---------------------GAGGLHLWKYEYP 292 (357)
T ss_dssp EEEET--TTEEEEEEEECCSSCEEE------EEEETTEEEEEEEEE---------------------TTSEEEEEEEECC
T ss_pred cCCCc--ccceeeeccCCCcCCEEE------EEECCCCCcEEEEEe---------------------CCCcEEEeecCCC
Confidence 43221 1111 11123333333 789999984 44443 1234888888765
Q ss_pred CeEEEeccCccccc-----ceeEEecc---CCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002194 563 SKERIWESDKEKYY-----ETTVALMS---DQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (954)
Q Consensus 563 ~~~~l~~~~~~~~~-----~~~~~~~~---~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g 619 (954)
........++.... .....+.. .-...+|+||++.++++... -..+++|++.+.
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~---d~~i~iw~~~~~ 354 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF---DQTVRVLIVTKL 354 (357)
T ss_dssp SCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET---TSEEEEEEECC-
T ss_pred cccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC---CCcEEEEECCCc
Confidence 54332222111000 00000000 00125799999988765543 246888886544
No 312
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.42 E-value=2.2e-12 Score=135.75 Aligned_cols=209 Identities=15% Similarity=0.107 Sum_probs=127.3
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002194 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (954)
Q Consensus 648 ~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G 727 (954)
+|.+++...+-+++ .|+||++||.+.... .|. ..+..| +++|.|++ .+..|+|
T Consensus 7 ~g~~l~~~~~g~~~--------~~~vv~lHG~~~~~~-----------~~~----~~~~~L-~~~~~v~~---~D~~G~G 59 (264)
T 3ibt_A 7 NGTLMTYSESGDPH--------APTLFLLSGWCQDHR-----------LFK----NLAPLL-ARDFHVIC---PDWRGHD 59 (264)
T ss_dssp TTEECCEEEESCSS--------SCEEEEECCTTCCGG-----------GGT----THHHHH-TTTSEEEE---ECCTTCS
T ss_pred CCeEEEEEEeCCCC--------CCeEEEEcCCCCcHh-----------HHH----HHHHHH-HhcCcEEE---EccccCC
Confidence 67777766654321 478999999742211 121 234444 55699999 6667888
Q ss_pred Ccccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCcccEEEEeccCCCCCCC-----
Q 002194 728 DEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTLT----- 799 (954)
Q Consensus 728 ~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~~----- 799 (954)
.+... ........+|+.++++.+ +.+++.++|||+||.+++.++.++ |++++++|++++... ...
T Consensus 60 ~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~-~~~~~~~~ 132 (264)
T 3ibt_A 60 AKQTDSGDFDSQTLAQDLLAFIDAK------GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQ-PHPGFWQQ 132 (264)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSS-CCHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCC-cChhhcch
Confidence 77543 223456667777666654 335899999999999999999999 999999999987651 100
Q ss_pred ------CCCCc------------cc-cchh---------hhcHHHHH------------hcCcccccCCCCCCEEEEEeC
Q 002194 800 ------PFGFQ------------NE-DRTL---------WEATSTYV------------EMSPFMSANKLKKPILLVHGE 839 (954)
Q Consensus 800 ------~~~~~------------~~-~~~~---------~~~~~~~~------------~~sp~~~~~~~~~P~Lii~G~ 839 (954)
..... .. .... ......+. ..++...+.++++|+|++||.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~ 212 (264)
T 3ibt_A 133 LAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIY 212 (264)
T ss_dssp HHHTTCTTTHHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEE
T ss_pred hhcccChhhHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEec
Confidence 00000 00 0000 00000000 011225567889999999875
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
.|...+......+.+.+. -...++++++++||... .+..+.+.+.|.+||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 213 SQPLSQDYRQLQLEFAAG----HSWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp CCSCCHHHHHHHHHHHHH----CTTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred CCccchhhHHHHHHHHHh----CCCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 554332113333343332 33479999999999763 5566777788888864
No 313
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.41 E-value=3.3e-11 Score=132.02 Aligned_cols=244 Identities=8% Similarity=0.035 Sum_probs=154.4
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc----eeecccCCCccccccccceeEecCCe-EEEEEec
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNST-LLVCTIP 263 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~~~~wspDG~-~l~~~~~ 263 (954)
..+..++|+|||+.|+.... ...|+++++++++ .+.+...... +..++|+|||+ .|++..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~---------d~~v~iw~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~- 76 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSW---------DGSLTVYKFDIQAKNVDLLQSLRYKHP-----LLCCNFIDNTDLQIYVGT- 76 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEET---------TSEEEEEEEETTTTEEEEEEEEECSSC-----EEEEEEEESSSEEEEEEE-
T ss_pred CcEEEEEEcCCCCEEEEEcC---------CCeEEEEEeCCCCccccceeeeecCCc-----eEEEEECCCCCcEEEEEc-
Confidence 46888999999999988652 4566667776666 4444433322 77899999999 888761
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C-CceeEcCC--C-ccccccc
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-GTVKEIGP--P-AVYTSLD 338 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~-G~~~~l~~--~-~~~~~~~ 338 (954)
....|.++++ . +....+.. . ..+..++
T Consensus 77 ------------------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 77 ------------------------------------------------VQGEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp ------------------------------------------------TTSCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred ------------------------------------------------CCCeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 1234666676 3 45556655 5 7788899
Q ss_pred cCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC---------ceEEEeccCCCcccCCccccccccCccceeeccC
Q 002194 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG---------IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (954)
Q Consensus 339 ~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g---------~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspD 409 (954)
|+| ++.|+..+.+ +.+.+||+.. ++. +.... ....+..++|+|+
T Consensus 109 ~~~-~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~--~~~~~-----------~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 109 KYG-DDKLIAASWD-------------GLIEVIDPRNYGDGVIAVKNLN--SNNTK-----------VKNKIFTMDTNSS 161 (342)
T ss_dssp EET-TTEEEEEETT-------------SEEEEECHHHHTTBCEEEEESC--SSSSS-----------SCCCEEEEEECSS
T ss_pred eCC-CCEEEEEcCC-------------CeEEEEcccccccccccccCCe--eeEEe-----------eCCceEEEEecCC
Confidence 999 8888887743 3899999874 221 11111 1234567899998
Q ss_pred CCCceEEEEeccCCCccccccCCCeEEEEecCCCC-CCC-ce-EEeecccccCceeecc-CCceEEEEEeccccceEEEE
Q 002194 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEG-PE-ILHKLDLRYGGISWCD-DSLALVYESWYKTRRTRTWV 485 (954)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~-~~-~l~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~ 485 (954)
+ ++.. ...+.|.+|++ .. +.. .. ........+..++|+| |++.|+....++ ..+||.
T Consensus 162 ~--l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg--~i~i~~ 222 (342)
T 1yfq_A 162 R--LIVG-------------MNNSQVQWFRL--PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG--RVAVEF 222 (342)
T ss_dssp E--EEEE-------------ESTTEEEEEES--SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS--EEEEEE
T ss_pred c--EEEE-------------eCCCeEEEEEC--CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC--cEEEEE
Confidence 8 4333 33558999996 22 222 22 2234456678899999 999888876543 366777
Q ss_pred EcCCCCC--CCcEEEecCCCC---------CccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeE
Q 002194 486 ISPGSKD--VAPRILFDRSSE---------DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (954)
Q Consensus 486 ~d~~~~~--~~~~~l~~~~~~---------~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 554 (954)
++..+.. ............ .+.. +.|+|||++|+.... ...|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~s~~~~~l~~~~~---------------------dg~i 275 (342)
T 1yfq_A 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS------IEFSPRHKFLYTAGS---------------------DGII 275 (342)
T ss_dssp CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE------EEECTTTCCEEEEET---------------------TSCE
T ss_pred EcCCCcccccccceeeecccccccccccceeEEE------EEEcCCCCEEEEecC---------------------CceE
Confidence 7665100 122222222211 2222 789999998887652 2249
Q ss_pred EEEECCCCCeEEEe
Q 002194 555 DLFDINTGSKERIW 568 (954)
Q Consensus 555 ~~~d~~~g~~~~l~ 568 (954)
++||+.+++.....
T Consensus 276 ~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 276 SCWNLQTRKKIKNF 289 (342)
T ss_dssp EEEETTTTEEEEEC
T ss_pred EEEcCccHhHhhhh
Confidence 99999988765443
No 314
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.5e-11 Score=134.36 Aligned_cols=271 Identities=10% Similarity=0.057 Sum_probs=146.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~ 189 (954)
.+..++|||| .||..+.+ ..|.+|++..+. ......+....+..
T Consensus 16 ~v~~~~~s~~--~las~~~D---------------------------------~~i~lw~~~~~~-~~~~~~~~~~~h~~ 59 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTD---------------------------------RKIKLVSVKYDD-FTLIDVLDETAHKK 59 (330)
T ss_dssp CEEEEEEETT--EEEEEESS---------------------------------SCEEEEECSSSC-CEEEEEECTTCCCS
T ss_pred ceeeeccCCC--EEEEEcCC---------------------------------CEEEEEEecCCC-eEEEEEEecCCccC
Confidence 4567888888 67776664 578999985411 01111221111233
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCC-------ceeecccCCCccccccccceeEecCCeEEEEEe
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-------KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g-------~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (954)
.+..++|+|||+.|+... .++ .|.+++++.+ +.......... .+..++|+|||++|+...
T Consensus 60 ~v~~v~~sp~~~~las~s-------~D~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~----~V~~v~~sp~g~~las~s 126 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGS-------FDS--TVSIWAKEESADRTFEMDLLAIIEGHEN----EVKGVAWSNDGYYLATCS 126 (330)
T ss_dssp CEEEEEECTTSSEEEEEE-------TTS--CEEEEEC-------CCCEEEEEEC--------CEEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEe-------CCC--cEEEEEcccCcCccccceeEEEEcCCCC----cEEEEEECCCCCEEEEEe
Confidence 688899999999888755 233 4455555322 11111111221 267899999999998761
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-C-Cc----eeEcCCC-cccc
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-GT----VKEIGPP-AVYT 335 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~-G~----~~~l~~~-~~~~ 335 (954)
. ...|.++++ . +. ...+... ..+.
T Consensus 127 ---------------------~----------------------------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 127 ---------------------R----------------------------DKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp ---------------------T----------------------------TSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred ---------------------C----------------------------CCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 1 123555565 2 21 2233434 6788
Q ss_pred ccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 336 ~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
.++|+|||+.|+..+.+ +.+.+|+...+..+.+.... ++...+..++|+||+....+
T Consensus 158 ~v~~~p~~~~l~s~s~D-------------~~i~iW~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 158 HVIWHPSEALLASSSYD-------------DTVRIWKDYDDDWECVAVLN----------GHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp EEEECSSSSEEEEEETT-------------SCEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECCSSSSCEE
T ss_pred EEEECCCCCEEEEEcCC-------------CeEEEEECCCCCeeEEEEcc----------CCCCcEEEEEecCCCCeeEE
Confidence 89999999999888743 38999998765332222211 12234567899999433222
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCC----c--e---EEee-cccccCceeeccCCceEEEEEeccccceEEEE
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----P--E---ILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWV 485 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~----~--~---~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~ 485 (954)
... +..+.|.+|++ .++. . . .+.. +...+..++|++++ .|+..+.++ ..+||.
T Consensus 215 ~s~-----------s~D~~v~iw~~---~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg--~v~iw~ 277 (330)
T 2hes_X 215 CSG-----------SDDSTVRVWKY---MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADG--VLAVYE 277 (330)
T ss_dssp EEE-----------ETTSCEEEEEE---EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTS--CEEEEE
T ss_pred EEE-----------eCCCeEEEEEe---cCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCC--EEEEEE
Confidence 211 23446777765 2110 0 1 1111 45567789999776 566554433 266776
Q ss_pred EcCCCCCCCcEEE-e--cCCCC-CccCCCCCCCeeecc--CCcEEEEEE
Q 002194 486 ISPGSKDVAPRIL-F--DRSSE-DVYSDPGSPMMRRTS--TGTYVIAKI 528 (954)
Q Consensus 486 ~d~~~~~~~~~~l-~--~~~~~-~~~~~~~~~~~~~sp--dG~~l~~~~ 528 (954)
.. ++ +...+ . ..+.. .+.. ++|+| ||+.|+...
T Consensus 278 ~~--~~--~~~~~~~~~~~h~~~~v~~------v~~~~~~~~~~las~s 316 (330)
T 2hes_X 278 EV--DG--EWKVFAKRALCHGVYEINV------VKWLELNGKTILATGG 316 (330)
T ss_dssp EE--TT--EEEEEEEESCTTTTSCEEE------EEEC-----CCEEEEE
T ss_pred cC--CC--ceEEEeccccccccceEEE------EEEecCCCceEEEEec
Confidence 54 22 11111 1 11111 2222 77898 788887765
No 315
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.41 E-value=9.7e-13 Score=146.70 Aligned_cols=226 Identities=14% Similarity=0.083 Sum_probs=133.4
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc--eeecccCCCccccccccceeEecCCeEEEEEecCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK--ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (954)
.+..++|||||+.|+... . ...|.+++++++. .......... .+..++|+|||++|+...
T Consensus 13 ~v~~~~~s~~g~~l~~~~-------~--d~~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s----- 74 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTT-------A--TNQVELYEQDGNGWKHARTFSDHDK----IVTCVDWAPKSNRIVTCS----- 74 (377)
T ss_dssp CCSCCEECSSSSEEECCC-------S--SSCBCEEEEETTEEEECCCBCCCSS----CEEEEEECTTTCCEEEEE-----
T ss_pred cEEEEEECCCCCEEEEec-------C--CCEEEEEEccCCceEEEEEEecCCc----eEEEEEEeCCCCEEEEEe-----
Confidence 588899999999988743 2 3455555666663 3222222222 277899999999888761
Q ss_pred CCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc----eeEcCCC-ccccccccCC
Q 002194 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP-AVYTSLDPSP 341 (954)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~----~~~l~~~-~~~~~~~~Sp 341 (954)
....|.++++ ++. ...+... ..+..++|+|
T Consensus 75 --------------------------------------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (377)
T 3dwl_C 75 --------------------------------------------QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP 110 (377)
T ss_dssp --------------------------------------------TTSSEEEC------CCCCEEECCCCSSCEEEEECCT
T ss_pred --------------------------------------------CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC
Confidence 1123556666 544 3334444 7788999999
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCce----EEEeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~----~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~ 417 (954)
||+.|+..+.+ +.+.+||+++++ .+.+... ....+..++|+|||+.++..
T Consensus 111 ~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~~l~~~- 164 (377)
T 3dwl_C 111 NEDKFAVGSGA-------------RVISVCYFEQENDWWVSKHLKRP------------LRSTILSLDWHPNNVLLAAG- 164 (377)
T ss_dssp TSSCCEEEESS-------------SCEEECCC-----CCCCEEECSS------------CCSCEEEEEECTTSSEEEEE-
T ss_pred CCCEEEEEecC-------------CeEEEEEECCcccceeeeEeecc------------cCCCeEEEEEcCCCCEEEEE-
Confidence 99999988743 379999998654 2333320 12345789999999876665
Q ss_pred EeccCCCccccccCCCeEEEEecCCCCCCC----------------ceEE--eecccccCceeeccCCceEEEEEecccc
Q 002194 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----------------PEIL--HKLDLRYGGISWCDDSLALVYESWYKTR 479 (954)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~----------------~~~l--~~~~~~~~~~~~spDg~~l~~~~~~~~~ 479 (954)
+..+.|.+|++ .... ...+ ..+...+..++|+|||+.|+..+.++.
T Consensus 165 ------------~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~- 228 (377)
T 3dwl_C 165 ------------CADRKAYVLSA---YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSS- 228 (377)
T ss_dssp ------------ESSSCEEEEEE---CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTE-
T ss_pred ------------eCCCEEEEEEE---EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCc-
Confidence 33456788875 2110 1111 134555778999999999988865432
Q ss_pred ceEEEEEcCCCCCCCcE--EEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 480 RTRTWVISPGSKDVAPR--ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 480 ~~~l~~~d~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
.+||.+ .++...+. .....+...+.. +.|+|||++|+...
T Consensus 229 -i~iwd~--~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 229 -VTIAYP--SAPEQPPRALITVKLSQLPLRS------LLWANESAIVAAGY 270 (377)
T ss_dssp -EC-CEE--CSTTSCEEECCCEECSSSCEEE------EEEEETTEEEEEES
T ss_pred -EEEEEC--CCCCCcceeeEeecCCCCceEE------EEEcCCCCEEEEEc
Confidence 445554 44321111 112222222333 78999999887654
No 316
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.41 E-value=1.5e-12 Score=140.02 Aligned_cols=208 Identities=14% Similarity=0.082 Sum_probs=130.3
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (954)
..+|.+++...+- ..|+||++||++... ..|. .....|+++ |.|++ .+..|
T Consensus 16 ~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~~----~~~~~L~~~-~~vi~---~D~~G 66 (301)
T 3kda_A 16 EVDGVKLHYVKGG----------QGPLVMLVHGFGQTW-----------YEWH----QLMPELAKR-FTVIA---PDLPG 66 (301)
T ss_dssp EETTEEEEEEEEE----------SSSEEEEECCTTCCG-----------GGGT----TTHHHHTTT-SEEEE---ECCTT
T ss_pred eeCCeEEEEEEcC----------CCCEEEEECCCCcch-----------hHHH----HHHHHHHhc-CeEEE---EcCCC
Confidence 3488888866652 147899999974221 1121 234556666 99999 66678
Q ss_pred CCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC---
Q 002194 726 EGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSK-IAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT--- 799 (954)
Q Consensus 726 ~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~r-i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~--- 799 (954)
+|.+... ........+|+.+.++.+ +.++ +.++||||||.+++.++.++|++++++|++++.......
T Consensus 67 ~G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 140 (301)
T 3kda_A 67 LGQSEPPKTGYSGEQVAVYLHKLARQF------SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRF 140 (301)
T ss_dssp STTCCCCSSCSSHHHHHHHHHHHHHHH------CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGS
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHc------CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccch
Confidence 8877543 223456677777777665 2346 999999999999999999999999999999975321000
Q ss_pred ----------CCCC------cccc------------chh---------hhcH---HHH-----------------H----
Q 002194 800 ----------PFGF------QNED------------RTL---------WEAT---STY-----------------V---- 818 (954)
Q Consensus 800 ----------~~~~------~~~~------------~~~---------~~~~---~~~-----------------~---- 818 (954)
.+.+ .... ... +... +.+ .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (301)
T 3kda_A 141 PAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNE 220 (301)
T ss_dssp BSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHH
T ss_pred hhhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhcc
Confidence 0000 0000 000 0000 000 0
Q ss_pred ----hcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 819 ----EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 819 ----~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
.......+.++++|+|+++|++| ++ ......+. ..-.++++++++++||... .+..+.+.+.|.+|+
T Consensus 221 ~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~--~~~~~~~~----~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~~l 291 (301)
T 3kda_A 221 SVRQNAELAKTRLQMPTMTLAGGGAGG--MG--TFQLEQMK----AYAEDVEGHVLPGCGHWLP-EECAAPMNRLVIDFL 291 (301)
T ss_dssp HHHHHHHHTTSCBCSCEEEEEECSTTS--CT--THHHHHHH----TTBSSEEEEEETTCCSCHH-HHTHHHHHHHHHHHH
T ss_pred chhhcccchhhccccCcceEEEecCCC--CC--hhHHHHHH----hhcccCeEEEcCCCCcCch-hhCHHHHHHHHHHHH
Confidence 00001122378999999999999 44 55555543 3334589999999999873 566677777777777
Q ss_pred HHh
Q 002194 895 QKY 897 (954)
Q Consensus 895 ~~~ 897 (954)
++.
T Consensus 292 ~~~ 294 (301)
T 3kda_A 292 SRG 294 (301)
T ss_dssp TTS
T ss_pred hhC
Confidence 653
No 317
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.41 E-value=5.3e-11 Score=133.68 Aligned_cols=298 Identities=12% Similarity=0.028 Sum_probs=174.8
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeec----
Q 002194 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQG---- 184 (954)
Q Consensus 110 ~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~---- 184 (954)
.+..++||| ||++|+....+ +.|.+|++.. +..........
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~d---------------------------------g~i~iw~~~~-~~~~~~~~~~~~~~~ 90 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSD---------------------------------GVIVLYDLEN-SSRQSYYTCKAVCSI 90 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETT---------------------------------SCEEEEECCC-CSSSSCEEECEEEEE
T ss_pred cEEEEEEecCCCCEEEEEcCC---------------------------------CeEEEEECCC-CcccceEeccccccc
Confidence 566789999 99999998875 4789999854 21111111000
Q ss_pred -----CCCCCcccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecC---C
Q 002194 185 -----FPDGAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN---S 255 (954)
Q Consensus 185 -----~~~~~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD---G 255 (954)
......+..+.|+| +++.|+... ....|.++++++++.......... +..+.|+|+ +
T Consensus 91 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 156 (408)
T 4a11_B 91 GRDHPDVHRYSVETVQWYPHDTGMFTSSS---------FDKTLKVWDTNTLQTADVFNFEET-----VYSHHMSPVSTKH 156 (408)
T ss_dssp CTTCTTCCSSCEEEEEECTTCTTCEEEEE---------TTSEEEEEETTTTEEEEEEECSSC-----EEEEEECSSCSSC
T ss_pred cccccccCCCcEEEEEEccCCCcEEEEEe---------CCCeEEEeeCCCCccceeccCCCc-----eeeeEeecCCCCC
Confidence 01234788899999 666666644 245788889988877666554432 557778874 4
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-c
Q 002194 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-A 332 (954)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~ 332 (954)
..|+... ....|.++++ +++ ...+... .
T Consensus 157 ~~~~~~~-------------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~ 187 (408)
T 4a11_B 157 CLVAVGT-------------------------------------------------RGPKVQLCDLKSGSCSHILQGHRQ 187 (408)
T ss_dssp CEEEEEE-------------------------------------------------SSSSEEEEESSSSCCCEEECCCCS
T ss_pred cEEEEEc-------------------------------------------------CCCeEEEEeCCCcceeeeecCCCC
Confidence 4777651 1234778888 664 4444444 7
Q ss_pred cccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce--EEEeccCCCcc--cCCccccccccCccceeecc
Q 002194 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAE--DIPIAFNSVRKGMRSINWRS 408 (954)
Q Consensus 333 ~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~--~~~l~~~~~~~--~~p~~~~~~~~g~~~~~wsp 408 (954)
.+..++|+|||++++++... ++.+.+||+.... ...+....... ............+..++|+|
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASA------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp CEEEEEECSSCTTEEEEEET------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cEEEEEECCCCCcEEEEEcC------------CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 78899999999975544433 2389999997542 23322211110 01111223345567899999
Q ss_pred CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCce-EEeec----ccccCceee-ccCCceEEEEEeccccceE
Q 002194 409 DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-ILHKL----DLRYGGISW-CDDSLALVYESWYKTRRTR 482 (954)
Q Consensus 409 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~-~l~~~----~~~~~~~~~-spDg~~l~~~~~~~~~~~~ 482 (954)
||+.++.. +..+.|.+|++ ..++.. .+... ........+ ...+..+++.... ..
T Consensus 256 ~~~~l~~~-------------~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 315 (408)
T 4a11_B 256 DGLHLLTV-------------GTDNRMRLWNS---SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG----ST 315 (408)
T ss_dssp TSSEEEEE-------------ETTSCEEEEET---TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET----TE
T ss_pred CCCEEEEe-------------cCCCeEEEEEC---CCCccceeccccccccccccceeEEecCCCceEEEEecC----CE
Confidence 99977665 33557899996 333322 11111 111111222 2334556665443 24
Q ss_pred EEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002194 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (954)
Q Consensus 483 l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 562 (954)
|.++++.++ +.......+...+.. +.|+|||++|+.... ...|++||++++
T Consensus 316 i~v~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~---------------------dg~i~iw~~~~~ 366 (408)
T 4a11_B 316 IAVYTVYSG--EQITMLKGHYKTVDC------CVFQSNFQELYSGSR---------------------DCNILAWVPSLY 366 (408)
T ss_dssp EEEEETTTC--CEEEEECCCSSCEEE------EEEETTTTEEEEEET---------------------TSCEEEEEECC-
T ss_pred EEEEECcCC--cceeeeccCCCeEEE------EEEcCCCCEEEEECC---------------------CCeEEEEeCCCC
Confidence 777777764 344444444444444 889999999887762 224999999887
Q ss_pred CeE
Q 002194 563 SKE 565 (954)
Q Consensus 563 ~~~ 565 (954)
+..
T Consensus 367 ~~~ 369 (408)
T 4a11_B 367 EPV 369 (408)
T ss_dssp ---
T ss_pred Ccc
Confidence 643
No 318
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.40 E-value=1.4e-11 Score=132.21 Aligned_cols=206 Identities=12% Similarity=0.010 Sum_probs=125.8
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++....- + .|.||++||.+.... .| ......|++ .|.|++ .|.+|+
T Consensus 16 ~~g~~l~y~~~G--------~--g~~lvllHG~~~~~~-----------~w----~~~~~~L~~-~~~via---~Dl~G~ 66 (294)
T 1ehy_A 16 LPDVKIHYVREG--------A--GPTLLLLHGWPGFWW-----------EW----SKVIGPLAE-HYDVIV---PDLRGF 66 (294)
T ss_dssp CSSCEEEEEEEE--------C--SSEEEEECCSSCCGG-----------GG----HHHHHHHHT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcC--------C--CCEEEEECCCCcchh-----------hH----HHHHHHHhh-cCEEEe---cCCCCC
Confidence 578888765531 1 367999999642111 11 123444544 599999 677788
Q ss_pred CCcccch------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC
Q 002194 727 GDEEAND------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (954)
Q Consensus 727 G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~ 800 (954)
|.+..+. .......+|+.+.++.| ..+++.++||||||.+++.+|.++|++++++|++++........
T Consensus 67 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~ 140 (294)
T 1ehy_A 67 GDSEKPDLNDLSKYSLDKAADDQAALLDAL------GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPV 140 (294)
T ss_dssp TTSCCCCTTCGGGGCHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC---
T ss_pred CCCCCCccccccCcCHHHHHHHHHHHHHHc------CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchh
Confidence 8886542 22455566666666554 23589999999999999999999999999999998632110000
Q ss_pred ----------CC--Ccc--------ccch-------------------hh--hcHHHHHh-----------------c--
Q 002194 801 ----------FG--FQN--------EDRT-------------------LW--EATSTYVE-----------------M-- 820 (954)
Q Consensus 801 ----------~~--~~~--------~~~~-------------------~~--~~~~~~~~-----------------~-- 820 (954)
+. +.. .... .+ +..+.+.. .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (294)
T 1ehy_A 141 YFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIR 220 (294)
T ss_dssp --------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSS
T ss_pred hccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHh
Confidence 00 000 0000 00 00000100 0
Q ss_pred Cccc-----ccCCCCCCEEEEEeCCCCCCCCch-HHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 821 SPFM-----SANKLKKPILLVHGEEDNNSGTLT-MQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 821 sp~~-----~~~~~~~P~Lii~G~~D~~v~~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
.... .+.++++|+|+++|++|..+| . .....+.+.+ ...+++++|++||... .++...+.+.|.+||
T Consensus 221 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 221 PDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKYY----SNYTMETIEDCGHFLM-VEKPEIAIDRIKTAF 293 (294)
T ss_dssp SSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHHB----SSEEEEEETTCCSCHH-HHCHHHHHHHHHHHC
T ss_pred hhhhhcCCcccCcCCCCEEEEEeCCCCCcc--hHHHHHHHHHHc----CCCceEEeCCCCCChh-hhCHHHHHHHHHHHh
Confidence 0000 122788999999999999876 4 3344443322 3479999999999863 566777778888875
No 319
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.39 E-value=1.8e-10 Score=125.81 Aligned_cols=292 Identities=8% Similarity=0.032 Sum_probs=164.8
Q ss_pred CcccceeecCCC-CeEEEEEeeccccCCCCceEEEEEECCCCce-----eecccCCCccccccccceeEecCCeEEEEEe
Q 002194 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-----RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (954)
Q Consensus 189 ~~~~~~~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (954)
..+..++|+||+ +.|+..+ .|+...|| |+..++. .+....... .+..+.|+|||+.|+...
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s-------~D~~i~vW--d~~~~~~~~~~~~~~l~~h~~----~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSAS-------RDKTIIMW--KLTRDETNYGIPQRALRGHSH----FVSDVVISSDGQFALSGS 105 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEE-------TTSCEEEE--EECCSSSCSEEEEEEECCCSS----CEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEEeCCCCCEEEEEc-------CCCeEEEE--ECCCCCcccceeeEEEeCCCC----CEEEEEECCCCCEEEEEc
Confidence 479999999985 5555543 33444455 5444321 111111121 277899999999998761
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeE-cCCC-cccccccc
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPP-AVYTSLDP 339 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~-l~~~-~~~~~~~~ 339 (954)
....|..++. .+.... .... .......+
T Consensus 106 -------------------------------------------------~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (340)
T 4aow_A 106 -------------------------------------------------WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 136 (340)
T ss_dssp -------------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred -------------------------------------------------ccccceEEeecccceeeeecCCCCceeEEEE
Confidence 1123555565 332222 2222 45566789
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~ 419 (954)
+++++.|+..+.+ +.+.+||+.+.......... ....+..+.|++++...++...
T Consensus 137 ~~~~~~l~s~s~d-------------~~~~~~d~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~s~- 191 (340)
T 4aow_A 137 SSDNRQIVSGSRD-------------KTIKLWNTLGVCKYTVQDES-----------HSEWVSCVRFSPNSSNPIIVSC- 191 (340)
T ss_dssp CTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSS-----------CSSCEEEEEECSCSSSCEEEEE-
T ss_pred eecCccceeecCC-------------CeEEEEEeCCCceEEEEecc-----------ccCcccceEEccCCCCcEEEEE-
Confidence 9999999887743 37889998865443332211 1133456789998876655422
Q ss_pred ccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002194 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (954)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 499 (954)
+....|.+|++ ..+.....+..+...+..++|+|||+.|+..+.++ .|.++|+.+. +.....
T Consensus 192 ----------~~d~~i~i~d~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg----~i~iwd~~~~--~~~~~~ 253 (340)
T 4aow_A 192 ----------GWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG----QAMLWDLNEG--KHLYTL 253 (340)
T ss_dssp ----------ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC----EEEEEETTTT--EEEEEE
T ss_pred ----------cCCCEEEEEEC--CCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC----eEEEEEeccC--ceeeee
Confidence 22446888886 23323344455666788899999999988775443 3555566653 222222
Q ss_pred cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccccccee
Q 002194 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (954)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 579 (954)
... ..+.. +.|+|++..++... ...|++||++++........... ....
T Consensus 254 ~~~-~~v~~------~~~~~~~~~~~~~~----------------------d~~i~iwd~~~~~~~~~~~~~~~--~~~~ 302 (340)
T 4aow_A 254 DGG-DIINA------LCFSPNRYWLCAAT----------------------GPSIKIWDLEGKIIVDELKQEVI--STSS 302 (340)
T ss_dssp ECS-SCEEE------EEECSSSSEEEEEE----------------------TTEEEEEETTTTEEEEEECCC--------
T ss_pred cCC-ceEEe------eecCCCCceeeccC----------------------CCEEEEEECCCCeEEEeccccce--eeec
Confidence 221 11222 67899987665543 12489999987765433322210 0000
Q ss_pred EEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCc
Q 002194 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (954)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~ 620 (954)
......-...+|+|||+.|+..... ..+++|++.+|+
T Consensus 303 ~~h~~~v~~l~~s~dg~~l~sgs~D----g~v~iW~~~tGt 339 (340)
T 4aow_A 303 KAEPPQCTSLAWSADGQTLFAGYTD----NLVRVWQVTIGT 339 (340)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEC--
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCC----CEEEEEeCCCcC
Confidence 0000000125799999877643332 458899987774
No 320
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.39 E-value=8.8e-13 Score=149.12 Aligned_cols=230 Identities=10% Similarity=0.056 Sum_probs=136.5
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCC
Q 002194 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (954)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~ 188 (954)
+.+..++|||||++||..+.+ +.+.+|+.. + .+..+.+.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~d---------------------------------g~V~iwd~~-----~---~l~~l~~~ 124 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNN---------------------------------GNVSVFKDN-----K---MLTNLDSK 124 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETT---------------------------------SCEEEEETT-----E---EEEECCCS
T ss_pred CcEEEEEECCCCCEEEEEeCC---------------------------------CcEEEEeCC-----c---eeeeccCC
Confidence 457788899999999988876 578899852 1 22222211
Q ss_pred -----CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce--------eecccCCCccccccccceeEecCC
Q 002194 189 -----AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFVWVNNS 255 (954)
Q Consensus 189 -----~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~--------~~lt~~~~~~~~~~~~~~~wspDG 255 (954)
..+..++|||||+.||.... ...|-++++.++.. ..+.....+ ...-+..++|||||
T Consensus 125 ~~~~~~sv~svafSPDG~~LAsgs~---------DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg 194 (588)
T 2j04_A 125 GNLSSRTYHCFEWNPIESSIVVGNE---------DGELQFFSIRKNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV 194 (588)
T ss_dssp SCSTTTCEEEEEECSSSSCEEEEET---------TSEEEEEECCCCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEETTE
T ss_pred CccccccEEEEEEcCCCCEEEEEcC---------CCEEEEEECCCCccccccceeeeeeeccccc-ccccEEEEEEcCCc
Confidence 14788999999999999652 45666677777642 222111110 11127789999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce----eEcC-
Q 002194 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV----KEIG- 329 (954)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~----~~l~- 329 (954)
.++.. ....++++++ ++.. +.+.
T Consensus 195 -Laass--------------------------------------------------~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 195 -LVAAL--------------------------------------------------SNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp -EEEEE--------------------------------------------------TTCCEEEECCCSSSSCCCEEEEEC
T ss_pred -EEEEe--------------------------------------------------CCCeEEEEECCCCccccceeeecc
Confidence 44433 1223666777 4442 2342
Q ss_pred CC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceee--
Q 002194 330 PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINW-- 406 (954)
Q Consensus 330 ~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~w-- 406 (954)
.. ..+.+++|| |+.||.++. +.|.+|++.+++...+... +...+..++|
T Consensus 224 ~h~~~V~svaFs--g~~LASa~~--------------~tIkLWd~~~~~~~~~~~g------------h~~~V~~va~~~ 275 (588)
T 2j04_A 224 ASRRKITDLKIV--DYKVVLTCP--------------GYVHKIDLKNYSISSLKTG------------SLENFHIIPLNH 275 (588)
T ss_dssp CCSSCCCCEEEE--TTEEEEECS--------------SEEEEEETTTTEEEEEECS------------CCSCCCEEEETT
T ss_pred cccCcEEEEEEE--CCEEEEEeC--------------CeEEEEECCCCeEEEEEcC------------CCceEEEEEeee
Confidence 23 678899999 688887762 2899999998877544421 1134567888
Q ss_pred ccCCCCceEEEEeccCC------------CccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEE
Q 002194 407 RSDKPSTLYWAETQDGG------------DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYES 474 (954)
Q Consensus 407 spDg~~i~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~ 474 (954)
||||+.++.. ..+|. +....+.....+++|+. .++....+.. ...+.+++|||||+.++.+.
T Consensus 276 s~d~~~La~a--~edG~klw~~d~~~~spd~~l~a~~d~~v~lW~~---~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 276 EKESTILLMS--NKTSYKVLLEDELHVTADNIIAPYLEKKFKKWST---IWNEFNNYET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp CSSCEEEEEC--SSCEEEEEESSSEEEECCCSSHHHHHHHHHHTTT---TTTSSSSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred CCCCCEEEEE--cCCCCEEEeeccEEECCCceEEEEcCCEEEEEEC---CCCceeeecc-ceEEEEEEECCCCCEEEEEE
Confidence 8888755543 11110 00000011223444442 3333332222 44567899999999888764
No 321
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.39 E-value=1.4e-10 Score=138.28 Aligned_cols=287 Identities=8% Similarity=0.051 Sum_probs=174.2
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCC----ceeecccCCCcccccc-ccceeEec--CCeEEEEE
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG----KARPLFQSPDIYLNAI-FDNFVWVN--NSTLLVCT 261 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g----~~~~lt~~~~~~~~~~-~~~~~wsp--DG~~l~~~ 261 (954)
..+..++|||||++|++.. ...|.+++++++ +......... .. +..++|+| ||++|+..
T Consensus 19 ~~v~~~~~spdg~~l~~~~----------~~~v~v~~~~~~~~~~~~~~~~~~h~----~~~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC----------GKSAFVRCLDDGDSKVPPVVQFTGHG----SSVVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE----------TTEEEEEECCSSCCSSCSEEEECTTT----TSCEEEEEECSSTTCCEEEEE
T ss_pred CceeEEEECCCCCEEEEec----------CCeEEEEECCCCCCccccceEEecCC----CceEEEEEECcCCCCCEEEEe
Confidence 3688899999999999965 347888888876 4333322222 23 56899999 99999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC------c---eeEcCCC
Q 002194 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG------T---VKEIGPP 331 (954)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G------~---~~~l~~~ 331 (954)
. . ...|.++++ +| + ...+...
T Consensus 85 ~---------------------~----------------------------dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 115 (615)
T 1pgu_A 85 D---------------------E----------------------------SGKVIVWGWTFDKESNSVEVNVKSEFQVL 115 (615)
T ss_dssp E---------------------T----------------------------TSEEEEEEEEEEGGGTEEEEEEEEEEECC
T ss_pred c---------------------C----------------------------CCEEEEEeCCCCcccccccccccchhhcc
Confidence 1 1 123445555 33 1 2223323
Q ss_pred -ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCC
Q 002194 332 -AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (954)
Q Consensus 332 -~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg 410 (954)
..+..++|||||++|+..+..... ...+++|+ .+.....+..+. ..+..+.|+|||
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~~~---------~~~v~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~~ 172 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGRDN---------FGVFISWD-SGNSLGEVSGHS-------------QRINACHLKQSR 172 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSC---------SEEEEETT-TCCEEEECCSCS-------------SCEEEEEECSSS
T ss_pred cccEEEEEEeCCCCEEEEeccCCCC---------ccEEEEEE-CCCcceeeecCC-------------ccEEEEEECCCC
Confidence 678889999999999998754321 23778887 333444433321 345679999999
Q ss_pred CCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeeccc---ccCceeeccC-CceEEEEEeccccceEEEEE
Q 002194 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL---RYGGISWCDD-SLALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~---~~~~~~~spD-g~~l~~~~~~~~~~~~l~~~ 486 (954)
+.+++.. +..+.|.+|+. ..+.....+..+.. .+..++|+|| |+.|+....++ .|.++
T Consensus 173 ~~~l~~~------------~~d~~v~vwd~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~vw 234 (615)
T 1pgu_A 173 PMRSMTV------------GDDGSVVFYQG--PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR----KISCF 234 (615)
T ss_dssp SCEEEEE------------ETTTEEEEEET--TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC----CEEEE
T ss_pred CcEEEEE------------eCCCcEEEEeC--CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC----eEEEE
Confidence 8544441 33568899986 22222334444555 6788999999 99888776543 36666
Q ss_pred cCCCCCCCcEEEe-c---CCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002194 487 SPGSKDVAPRILF-D---RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (954)
Q Consensus 487 d~~~~~~~~~~l~-~---~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 562 (954)
++.++ +..... . .....+.. +.|+ +|++++.... ...|.+||+.++
T Consensus 235 d~~~~--~~~~~~~~~~~~~~~~v~~------~~~~-~~~~l~~~~~---------------------d~~i~~wd~~~~ 284 (615)
T 1pgu_A 235 DGKSG--EFLKYIEDDQEPVQGGIFA------LSWL-DSQKFATVGA---------------------DATIRVWDVTTS 284 (615)
T ss_dssp ETTTC--CEEEECCBTTBCCCSCEEE------EEES-SSSEEEEEET---------------------TSEEEEEETTTT
T ss_pred ECCCC--CEeEEecccccccCCceEE------EEEc-CCCEEEEEcC---------------------CCcEEEEECCCC
Confidence 76664 323333 2 33333333 7889 9988887762 235999999988
Q ss_pred CeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCce
Q 002194 563 SKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (954)
Q Consensus 563 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~ 621 (954)
+.................. ..++ +++.++.... ...++++++.+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~~~----~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 285 KCVQKWTLDKQQLGNQQVG-------VVAT-GNGRIISLSL----DGTLNFYELGHDEV 331 (615)
T ss_dssp EEEEEEECCTTCGGGCEEE-------EEEE-ETTEEEEEET----TSCEEEEETTEEEE
T ss_pred cEEEEEcCCCCcccCceeE-------EEeC-CCCeEEEEEC----CCCEEEEECCCCcE
Confidence 7665544331100111111 1233 6666665443 34588888766543
No 322
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.39 E-value=1.6e-11 Score=133.26 Aligned_cols=242 Identities=13% Similarity=0.208 Sum_probs=149.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce---eeeecCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE---IEIQGFP 186 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~---~~lt~~~ 186 (954)
.+..++|||||++||..+.+ ..|.||++.. +.. ..+.++
T Consensus 15 ~V~~v~~s~~g~~lasgs~D---------------------------------~~v~lwd~~~----~~~~~~~~l~gH- 56 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSD---------------------------------RSVKIFDVRN----GGQILIADLRGH- 56 (316)
T ss_dssp CEEEEEECGGGCEEEEEETT---------------------------------TEEEEEEEET----TEEEEEEEEECC-
T ss_pred eEEEeeEcCCCCEEEEEeCC---------------------------------CeEEEEEecC----CCcEEEEEEcCC-
Confidence 56688999999999998876 5799999854 322 233332
Q ss_pred CCCcccceeecC--CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecc--cCCCccccccccceeEecC--CeEEEE
Q 002194 187 DGAKLNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLF--QSPDIYLNAIFDNFVWVNN--STLLVC 260 (954)
Q Consensus 187 ~~~~~~~~~wSP--DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt--~~~~~~~~~~~~~~~wspD--G~~l~~ 260 (954)
...+..++|+| +|+.|+..+ . ...|.++|+++++...+. ..... .+..++|+|| |..|+.
T Consensus 57 -~~~V~~v~~~~~~~~~~l~s~s-------~--D~~v~iWd~~~~~~~~~~~~~~h~~----~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 57 -EGPVWQVAWAHPMYGNILASCS-------Y--DRKVIIWREENGTWEKSHEHAGHDS----SVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp -SSCEEEEEECCGGGSSCEEEEE-------T--TSCEEEECCSSSCCCEEEEECCCSS----CCCEEEECCTTTCSCEEE
T ss_pred -CccEEEEEeCCCCCCCEEEEEE-------C--CCEEEEEECCCCcceEEEEccCCCC----ceEEEEECCCCCCcEEEE
Confidence 24688899986 488888755 2 445666677766422221 11221 2678999998 777776
Q ss_pred EecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC-ce---eEcCCC-ccc
Q 002194 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TV---KEIGPP-AVY 334 (954)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G-~~---~~l~~~-~~~ 334 (954)
.. ....|.++++ ++ .. ..+... ..+
T Consensus 123 gs-------------------------------------------------~D~~i~lwd~~~~~~~~~~~~~~~h~~~v 153 (316)
T 3bg1_A 123 GS-------------------------------------------------SDGAISLLTYTGEGQWEVKKINNAHTIGC 153 (316)
T ss_dssp EC-------------------------------------------------SSSCEEEEEECSSSCEEECCBTTSSSSCB
T ss_pred Ec-------------------------------------------------CCCCEEEEecCCCCCcceeeeeccccCCc
Confidence 51 1123555666 33 21 112222 566
Q ss_pred cccccCCCC-----------------cEEEEEeecCCcccccccCCCCcceEEEeccCc-eEEEeccCCCcccCCccccc
Q 002194 335 TSLDPSPDE-----------------KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNS 396 (954)
Q Consensus 335 ~~~~~SpDG-----------------k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~-~~~~l~~~~~~~~~p~~~~~ 396 (954)
..++|+|++ ++|+..+. ++.|.+||++++ ..+.+.... +
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-------------D~~v~lWd~~~~~~~~~~~~l~----------~ 210 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC-------------DNLIKLWKEEEDGQWKEEQKLE----------A 210 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBT-------------TSBCCEEEECTTSCEEEEECCB----------C
T ss_pred ceEEEccccCCccccccccccCccccceEEEecC-------------CCeEEEEEeCCCCccceeeecc----------c
Confidence 788899983 45554442 348899998743 222222211 2
Q ss_pred cccCccceeeccCC----CCceEEEEeccCCCccccccCCCeEEEEecCCCCCC--CceEEeecccccCceeeccCCceE
Q 002194 397 VRKGMRSINWRSDK----PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE--GPEILHKLDLRYGGISWCDDSLAL 470 (954)
Q Consensus 397 ~~~g~~~~~wspDg----~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~--~~~~l~~~~~~~~~~~~spDg~~l 470 (954)
+...+..++|+||+ +.|+.. +..+.|.+|+++....+ ..+.+......+..++|+|||+.|
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~-------------s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASC-------------SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANIL 277 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEE-------------ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCE
T ss_pred CCCceEEEEecCCCCCCCceEEEE-------------cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEE
Confidence 22456789999997 333333 34557888986211111 123455556678889999999999
Q ss_pred EEEEeccccceEEEEEcCCC
Q 002194 471 VYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 471 ~~~~~~~~~~~~l~~~d~~~ 490 (954)
+..+.++. .+||..+..+
T Consensus 278 as~~~D~~--v~lw~~~~~g 295 (316)
T 3bg1_A 278 AVSGGDNK--VTLWKESVDG 295 (316)
T ss_dssp EEEESSSC--EEEEEECTTS
T ss_pred EEEcCCCe--EEEEEECCCC
Confidence 98876554 7888876553
No 323
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.38 E-value=8.4e-11 Score=145.95 Aligned_cols=72 Identities=10% Similarity=-0.029 Sum_probs=50.1
Q ss_pred CccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCce---EEe---------ecccccCceeeccCC
Q 002194 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE---ILH---------KLDLRYGGISWCDDS 467 (954)
Q Consensus 400 g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~---~l~---------~~~~~~~~~~~spDg 467 (954)
.+..++|+|||+.++-. +..+.|.+|++ .++..+ .+. .+...+..++|||||
T Consensus 437 ~v~sv~~spdg~~laSg-------------s~DgtVrlWd~---~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg 500 (902)
T 2oaj_A 437 TKRQKLPAEYGTAFITG-------------HSNGSVRIYDA---SHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET 500 (902)
T ss_dssp CCCCCCCCSEEEEEEEE-------------ETTSEEEEEES---SCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT
T ss_pred CCCcccccccCcEEEEe-------------cCCCcEEEEEC---CCccccCCceEEeechhhcCCCCCCceeEEEecCCC
Confidence 34567899999866554 44668999996 444321 121 344567889999999
Q ss_pred ceEEEEEeccccceEEEEEcCC
Q 002194 468 LALVYESWYKTRRTRTWVISPG 489 (954)
Q Consensus 468 ~~l~~~~~~~~~~~~l~~~d~~ 489 (954)
+.|+.+..++. .+||.++..
T Consensus 501 ~~LAsgs~Dgt--V~lwd~~~~ 520 (902)
T 2oaj_A 501 LELAVSIETGD--VVLFKYEVN 520 (902)
T ss_dssp TEEEEEETTSC--EEEEEEEEC
T ss_pred CeEEEEecCcE--EEEEEecCc
Confidence 99998876654 788887643
No 324
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.38 E-value=6.5e-11 Score=127.67 Aligned_cols=275 Identities=9% Similarity=0.054 Sum_probs=166.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCc-eeeeecCCCC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQ-EIEIQGFPDG 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~-~~~lt~~~~~ 188 (954)
.+..++| |||++|+..+.+ +.|.+|++.. +. ...+.. ..
T Consensus 20 ~v~~~~~-~~~~~l~s~~~d---------------------------------g~v~vw~~~~----~~~~~~~~~--~~ 59 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRD---------------------------------GTVRLWSKDD----QWLGTVVYT--GQ 59 (313)
T ss_dssp CEEEEEE-EETTEEEEEETT---------------------------------SEEEEEEESS----SEEEEEEEE--CS
T ss_pred CcEEEEe-cCCCEEEEEEcC---------------------------------CcEEEEECCC----CEEEEEeec--CC
Confidence 4567888 999999988775 5799999853 33 223332 23
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc---eeecccCCCccccccccceeEecCCeEEEEEecCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK---ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~---~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (954)
..+....|+|||+.|+.... ...|.++++.... .......... .+..+.| +++.|+...
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~--~~~~l~~~~--- 121 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGK---------DTMINGVPLFATSGEDPLYTLIGHQG----NVCSLSF--QDGVVISGS--- 121 (313)
T ss_dssp SCEEEEEEETTTTEEEEEET---------TSCEEEEETTCCTTSCC-CEECCCSS----CEEEEEE--ETTEEEEEE---
T ss_pred ccEEEEEECCCCCEEEEecC---------CCeEEEEEeeecCCCCcccchhhccc----CEEEEEe--cCCEEEEEe---
Confidence 46889999999999988652 3455555654432 1111111111 2556777 566676551
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCCC-ccccccccCC-CC
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSP-DE 343 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~~-~~~~~~~~Sp-DG 343 (954)
....|.+++.......+... ..+..+.|+| ++
T Consensus 122 ----------------------------------------------~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 122 ----------------------------------------------WDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp ----------------------------------------------TTSEEEEEETTEEEEEEECCSSCEEEEEEEETTT
T ss_pred ----------------------------------------------CCCCEEEEcCCcEEEecccCCCceeEEEEccCCC
Confidence 11235555532223333333 6667788888 89
Q ss_pred cEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002194 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (954)
Q Consensus 344 k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~ 423 (954)
+.++..+.+ +.+.+||.. .....+... ....+..++|+|+++ ++..
T Consensus 156 ~~l~~~~~d-------------~~i~i~d~~-~~~~~~~~~------------~~~~i~~~~~~~~~~-~~~~------- 201 (313)
T 3odt_A 156 NKFLTASAD-------------KTIKLWQND-KVIKTFSGI------------HNDVVRHLAVVDDGH-FISC------- 201 (313)
T ss_dssp TEEEEEETT-------------SCEEEEETT-EEEEEECSS------------CSSCEEEEEEEETTE-EEEE-------
T ss_pred CEEEEEECC-------------CCEEEEecC-ceEEEEecc------------CcccEEEEEEcCCCe-EEEc-------
Confidence 998887743 389999833 222333221 113456789999998 4433
Q ss_pred CccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCC
Q 002194 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS 503 (954)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 503 (954)
+..+.|.+|++ ..+.....+..+...+..++|+||| .|+..+.+ ..|.++++.++ +.......+.
T Consensus 202 ------~~dg~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d----g~v~iwd~~~~--~~~~~~~~~~ 266 (313)
T 3odt_A 202 ------SNDGLIKLVDM--HTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGED----RTVRIWSKENG--SLKQVITLPA 266 (313)
T ss_dssp ------ETTSEEEEEET--TTCCEEEEEECCSSCEEEEEECTTS-CEEEEETT----SEEEEECTTTC--CEEEEEECSS
T ss_pred ------cCCCeEEEEEC--CchhhhhhhhcCCceEEEEEEecCC-CEEEEecC----CEEEEEECCCC--ceeEEEeccC
Confidence 33558999996 2333345555667778899999999 45555433 34777787775 3344444433
Q ss_pred CCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeE
Q 002194 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (954)
Q Consensus 504 ~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 565 (954)
..+.. +.|+|||+.++ .. ....|++||+++++..
T Consensus 267 ~~i~~------~~~~~~~~~~~-~~---------------------~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 267 ISIWS------VDCMSNGDIIV-GS---------------------SDNLVRIFSQEKSRWA 300 (313)
T ss_dssp SCEEE------EEECTTSCEEE-EE---------------------TTSCEEEEESCGGGCC
T ss_pred ceEEE------EEEccCCCEEE-Ee---------------------CCCcEEEEeCCCCcee
Confidence 33333 78999998543 32 1224999999876543
No 325
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.8e-11 Score=136.04 Aligned_cols=241 Identities=12% Similarity=0.133 Sum_probs=151.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCC-CC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~-~~ 188 (954)
.+..++|||||++||....+ +.|.+|++.. .....+..+. +.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~iw~~~~----~~~~~~~~~~~h~ 55 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSD---------------------------------KTIKIFEVEG----ETHKLIDTLTGHE 55 (379)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SCEEEEEEET----TEEEEEEEECCCS
T ss_pred cEEEEEEcCCCCEEEEEECC---------------------------------CcEEEEecCC----CcceeeeEecCCC
Confidence 56678999999999988765 4789999853 2222222222 23
Q ss_pred CcccceeecCC--CCeEEEEEeeccccCCCCceEEEEEECCCCce--eecccCCCccccccccceeEecC--CeEEEEEe
Q 002194 189 AKLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPLFQSPDIYLNAIFDNFVWVNN--STLLVCTI 262 (954)
Q Consensus 189 ~~~~~~~wSPD--G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~--~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~ 262 (954)
..+..+.|+|+ |+.|+... . ...|.++|+++++. ......... .+..+.|+|+ |+.|++..
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~-------~--dg~v~iwd~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~~~~ 122 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCS-------Y--DGKVLIWKEENGRWSQIAVHAVHSA----SVNSVQWAPHEYGPLLLVAS 122 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEE-------T--TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE
T ss_pred CcEEEEEeCCCCCCCEEEEec-------c--CCEEEEEEcCCCceeEeeeecCCCc----ceEEEEeCCCCCCCEEEEec
Confidence 46888999988 88888754 2 34566667767652 222221222 2678999999 88888761
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC---ceeEcCCC-cccccc
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYTSL 337 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G---~~~~l~~~-~~~~~~ 337 (954)
....|.++++ ++ ....+... ..+..+
T Consensus 123 -------------------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 123 -------------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp -------------------------------------------------TTSEEEEEECCTTSCCCEEEEECCTTCEEEE
T ss_pred -------------------------------------------------CCCcEEEEecCCCCceeeEEecCCCCceEEE
Confidence 1234667777 44 12223333 677889
Q ss_pred ccCC-------------CCcEEEEEeecCCcccccccCCCCcceEEEeccCce-E-EEeccCCCcccCCccccccccCcc
Q 002194 338 DPSP-------------DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-V-RELCDLPLAEDIPIAFNSVRKGMR 402 (954)
Q Consensus 338 ~~Sp-------------DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~-~~l~~~~~~~~~p~~~~~~~~g~~ 402 (954)
+|+| ||+.|+..+.+ +.|.+||+.++. . ..+.... .....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~----------~h~~~v~ 210 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQTYVLESTLE----------GHSDWVR 210 (379)
T ss_dssp EECCCC----------CTTCEEEEEETT-------------SCEEEEEEETTTTEEEEEEEEC----------CCSSCEE
T ss_pred EEcCccccccccccCCCCCCEEEEEeCC-------------CeEEEEEecCCCcceeeEEEEe----------cccCcEe
Confidence 9999 79999888743 389999997432 1 1111111 1123456
Q ss_pred ceeeccC---CCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC---ceEEe---ecccccCceeeccCCceEEEE
Q 002194 403 SINWRSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEILH---KLDLRYGGISWCDDSLALVYE 473 (954)
Q Consensus 403 ~~~wspD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~~~l~---~~~~~~~~~~~spDg~~l~~~ 473 (954)
.++|+|| ++.++.. +..+.|.+|++ ..+. ...+. .....+..++|+|||+.|+..
T Consensus 211 ~~~~sp~~~~~~~l~s~-------------~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASV-------------SQDRTCIIWTQ---DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp EEEECCCCSSSEEEEEE-------------ETTSCEEEEEE---SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred EEEECCCCCCCCeEEEE-------------eCCCEEEEEeC---CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe
Confidence 8999999 6655444 33457888886 3222 22221 144556778999999999988
Q ss_pred EeccccceEEEEEcCCC
Q 002194 474 SWYKTRRTRTWVISPGS 490 (954)
Q Consensus 474 ~~~~~~~~~l~~~d~~~ 490 (954)
..++. .++|.++...
T Consensus 275 ~~dg~--i~iw~~~~~~ 289 (379)
T 3jrp_A 275 GGDNK--VTLWKENLEG 289 (379)
T ss_dssp ESSSS--EEEEEEEETT
T ss_pred cCCCc--EEEEeCCCCC
Confidence 76433 7777776543
No 326
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.37 E-value=4.2e-11 Score=134.81 Aligned_cols=291 Identities=11% Similarity=0.021 Sum_probs=167.5
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCC-ce---eecccCCCccccccccceeEec-CCeEEEEEecCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-KA---RPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLL 265 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g-~~---~~lt~~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~ 265 (954)
....+++|+...+++. ..+...|.+++++.. +. ....... ...+..++|+| |+++|+...
T Consensus 37 ~~~~~~~~~~~~~~~~--------~~~~g~i~v~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~s~s--- 101 (402)
T 2aq5_A 37 SGFCAVNPKFMALICE--------ASGGGAFLVLPLGKTGRVDKNVPLVCGH----TAPVLDIAWCPHNDNVIASGS--- 101 (402)
T ss_dssp SCSEEECSSEEEEEBC--------CSSSCCEEEEETTCCEECCTTCCCBCCC----SSCEEEEEECTTCTTEEEEEE---
T ss_pred CCcEEECCCeEEEEEE--------EcCCCEEEEEECccCCCCCCCCceEecC----CCCEEEEEeCCCCCCEEEEEe---
Confidence 4457788866554442 233566777787542 21 1111111 22377899999 898888761
Q ss_pred CCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc--------eeEcCCC-cccc
Q 002194 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--------VKEIGPP-AVYT 335 (954)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~--------~~~l~~~-~~~~ 335 (954)
....|.++++ ++. ...+... ..+.
T Consensus 102 ----------------------------------------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~ 135 (402)
T 2aq5_A 102 ----------------------------------------------EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG 135 (402)
T ss_dssp ----------------------------------------------TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE
T ss_pred ----------------------------------------------CCCeEEEEEccCCCCccccCCceEEecCCCCeEE
Confidence 1234666676 442 3334434 6788
Q ss_pred ccccCCCCc-EEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002194 336 SLDPSPDEK-YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (954)
Q Consensus 336 ~~~~SpDGk-~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i 413 (954)
.++|+|||+ .|+..+. ++.+.+||+..++. ..+... .....+..++|+|||+.+
T Consensus 136 ~~~~~p~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 136 IVAWHPTAQNVLLSAGC-------------DNVILVWDVGTGAAVLTLGPD-----------VHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp EEEECSSBTTEEEEEET-------------TSCEEEEETTTTEEEEEECTT-----------TCCSCEEEEEECTTSSCE
T ss_pred EEEECcCCCCEEEEEcC-------------CCEEEEEECCCCCccEEEecC-----------CCCCceEEEEECCCCCEE
Confidence 899999995 5555542 23899999986654 333100 111345689999999987
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEE-eeccc-ccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL-HKLDL-RYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l-~~~~~-~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
+.. +..+.|.+|++ ..++. ..+ ..+.. .+..+.|+|||+.|+...... ....|.++|+.+
T Consensus 192 ~~~-------------~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~-~d~~i~iwd~~~ 254 (402)
T 2aq5_A 192 CTS-------------CRDKRVRVIEP---RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM-SERQVALWDTKH 254 (402)
T ss_dssp EEE-------------ETTSEEEEEET---TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT-CCEEEEEEETTB
T ss_pred EEE-------------ecCCcEEEEeC---CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC-CCceEEEEcCcc
Confidence 765 34568999996 33333 333 23333 267799999999877763211 124677777776
Q ss_pred CCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCC--eEEEe
Q 002194 491 KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS--KERIW 568 (954)
Q Consensus 491 ~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~ 568 (954)
+........-.....+.. +.|+|||++++.... ....|++||+.+++ ...+.
T Consensus 255 ~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~g~--------------------~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 255 LEEPLSLQELDTSSGVLL------PFFDPDTNIVYLCGK--------------------GDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp CSSCSEEEECCCCSSCEE------EEEETTTTEEEEEET--------------------TCSCEEEEEECSSTTCEEEEE
T ss_pred ccCCceEEeccCCCceeE------EEEcCCCCEEEEEEc--------------------CCCeEEEEEecCCCcceEeec
Confidence 522122222122222222 789999998876651 12249999998887 44443
Q ss_pred ccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEee
Q 002194 569 ESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (954)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt 625 (954)
..... ..-...+|+||+..++. + -..+.++++.+++.+.+.
T Consensus 309 ~~~~~----------~~v~~~~~sp~~~~~~s---~---~~~~~~~~l~~~~~~~i~ 349 (402)
T 2aq5_A 309 MFSSK----------ESQRGMGYMPKRGLEVN---K---CEIARFYKLHERKCEPIA 349 (402)
T ss_dssp EECCS----------SCCSEEEECCGGGSCGG---G---TEEEEEEEEETTEEEEEE
T ss_pred ccccC----------CcccceEEeccccccee---c---ceeEEEEEcCCCcEEEEE
Confidence 32211 01112468888876541 1 125666666666655543
No 327
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.37 E-value=5.5e-11 Score=131.36 Aligned_cols=242 Identities=11% Similarity=0.044 Sum_probs=142.6
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCC
Q 002194 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (954)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~ 188 (954)
..+..++|||||+.||....+ .+.+|++.. +........
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~----------------------------------~~~iw~~~~----~~~~~~~~~--- 58 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK----------------------------------SFEIYNVHP----VAHIMSQEM--- 58 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS----------------------------------EEEEEEETT----EEEEEEEEC---
T ss_pred CceEEEEECCCCCEEEEEcCC----------------------------------EEEEEecCC----cceeeeeec---
Confidence 367889999999999987664 567888743 222211111
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+....|+++++.++.+.. +...|.++|..+++.......... +..+.|++++. +++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~--------~d~~v~iWd~~~~~~~~~~~~~~~-----v~~v~~~~~~~--~~~------- 116 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTG--------VKEVVHIWDDVKKQDVSRIKVDAP-----VKDLFLSREFI--VVS------- 116 (355)
T ss_dssp SCCCEEEECTTSSEEEEECS--------STTEEEEEETTTTEEEEEEECSSC-----EEEEEECSSEE--EEE-------
T ss_pred CCeEEEEEcCCCCEEEEEEC--------CccEEEEEECCCCcEEEEEECCCc-----eEEEEEcCCEE--EEE-------
Confidence 13677889999998887542 234888889888776544333332 66788887753 322
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC-c-eeEcCCCccccccccCCCCcE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-T-VKEIGPPAVYTSLDPSPDEKY 345 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G-~-~~~l~~~~~~~~~~~SpDGk~ 345 (954)
....|+++++ ++ + ...+.. .....++++ +.
T Consensus 117 -------------------------------------------~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~ 149 (355)
T 3vu4_A 117 -------------------------------------------YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GL 149 (355)
T ss_dssp -------------------------------------------ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TE
T ss_pred -------------------------------------------EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cE
Confidence 1234777787 44 2 221111 222345666 77
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCC--CcccCC--ccccccccCccceeeccCCCCceEEEEecc
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP--LAEDIP--IAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~--~~~~~p--~~~~~~~~g~~~~~wspDg~~i~~~~~~~~ 421 (954)
+++.+... .+.+.+||+.++......... .....| ..+.++...+..++|+|||+.++..
T Consensus 150 la~~sg~~-----------~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~----- 213 (355)
T 3vu4_A 150 LVYSNEFN-----------LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC----- 213 (355)
T ss_dssp EEEEESSC-----------TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE-----
T ss_pred EEEeCCCc-----------CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE-----
Confidence 88763221 348999999864310000000 000001 1122333556789999999876654
Q ss_pred CCCccccccCCCe-EEEEecCCCCCCCceEEe-e-cccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 422 GGDAKVEVTPRDI-IYTQQAEPVQGEGPEILH-K-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 422 ~~~~~~~~~~~~~-l~~~~~~~~~g~~~~~l~-~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
+..+. |.+|++ .++.....+. . +...+..++|+|||+.|+..+.++. .+||.+..
T Consensus 214 --------s~d~~~v~iwd~--~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~--v~iw~~~~ 271 (355)
T 3vu4_A 214 --------SQDGTIIRVFKT--EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT--LHVFEIFN 271 (355)
T ss_dssp --------ETTCSEEEEEET--TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE--EEEEESSC
T ss_pred --------eCCCCEEEEEEC--CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE--EEEEEccC
Confidence 34555 899996 3344444554 2 5667888999999999998876543 55665543
No 328
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.37 E-value=2.5e-13 Score=155.38 Aligned_cols=210 Identities=18% Similarity=0.122 Sum_probs=134.9
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCC-cEEEEcCCC-CCCCCCCc
Q 002194 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG-FAILGGPTT-PIIGEGDE 729 (954)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G-~~V~~~~~~-~~~G~G~~ 729 (954)
+...+|.|+.. . .++|+||++|||++..+...... .....|+++| ++|+..+|+ +..|++..
T Consensus 83 L~l~v~~P~~~--~--~~~PviV~iHGGg~~~g~~~~~~------------~~~~~la~~g~~vvv~~nYRlg~~Gf~~~ 146 (489)
T 1qe3_A 83 LYVNVFAPDTP--S--QNLPVMVWIHGGAFYLGAGSEPL------------YDGSKLAAQGEVIVVTLNYRLGPFGFLHL 146 (489)
T ss_dssp CEEEEEEECSS--C--CSEEEEEEECCSTTTSCCTTSGG------------GCCHHHHHHHTCEEEEECCCCHHHHSCCC
T ss_pred CEEEEEeCCCC--C--CCCCEEEEECCCccccCCCCCcc------------cCHHHHHhcCCEEEEecCccCcccccCcc
Confidence 56678888751 1 23899999999976544321110 1134567665 999998887 33344432
Q ss_pred cc--chhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCcccEEEEeccCCCCCCCC--
Q 002194 730 EA--NDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTP-- 800 (954)
Q Consensus 730 ~~--~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~~~~~~-- 800 (954)
.. ........+.|+.++++|+.++. ..|+++|.|+|+|+||++++.++... +++|+++|+.+|..++....
T Consensus 147 ~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~ 226 (489)
T 1qe3_A 147 SSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQA 226 (489)
T ss_dssp TTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHH
T ss_pred ccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHH
Confidence 11 11223455789999999998862 36999999999999999999887753 57899999999976321100
Q ss_pred ----------CCCcccc-chhhh--cHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEE
Q 002194 801 ----------FGFQNED-RTLWE--ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRL 867 (954)
Q Consensus 801 ----------~~~~~~~-~~~~~--~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~ 867 (954)
.++..+. ..+.. ..+.+...+++........|.+++|+..|..+. +++..+++++.+..++++.+
T Consensus 227 ~~~~~~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~--~~~~~~~~~~~~~~~vp~~~ 304 (489)
T 1qe3_A 227 ASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTL--PEEPEKSIAEGAASGIPLLI 304 (489)
T ss_dssp HHHHHHHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTB--CSCHHHHHHTTTTTTCCEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeec--CcCHHHHHhcCCCCCCCEEE
Confidence 0000000 00000 011111112221111234567889999999987 88899999888888999999
Q ss_pred EEeCCCCCcCCC
Q 002194 868 VILPFESHGYAA 879 (954)
Q Consensus 868 ~~~~~~~H~~~~ 879 (954)
-..++++|.+..
T Consensus 305 g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 305 GTTRDEGYLFFT 316 (489)
T ss_dssp EEETTGGGGTCC
T ss_pred eeecchhHhhcc
Confidence 999999998753
No 329
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.36 E-value=1.2e-11 Score=132.00 Aligned_cols=215 Identities=14% Similarity=0.066 Sum_probs=128.3
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCC-cccHHHHHHHHCCcEEEEcCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPR-IGSTSVLLWLARGFAILGGPTTPIIG 725 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~la~~G~~V~~~~~~~~~G 725 (954)
.+|.+++...+-++. ...|+||++||.+..... .|.. +....+..| +++|.|++ .+..|
T Consensus 18 ~~~~~l~y~~~G~~~------~~~p~vvllHG~~~~~~~----------~~~~~~~~~~~~~L-~~~~~vi~---~D~~G 77 (286)
T 2qmq_A 18 TPYGSVTFTVYGTPK------PKRPAIFTYHDVGLNYKS----------CFQPLFRFGDMQEI-IQNFVRVH---VDAPG 77 (286)
T ss_dssp ETTEEEEEEEESCCC------TTCCEEEEECCTTCCHHH----------HHHHHHTSHHHHHH-HTTSCEEE---EECTT
T ss_pred cCCeEEEEEeccCCC------CCCCeEEEeCCCCCCchh----------hhhhhhhhchhHHH-hcCCCEEE---ecCCC
Confidence 367888877764321 125889999996421100 0000 000023344 45799999 45556
Q ss_pred CCCccc--chh----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCC
Q 002194 726 EGDEEA--NDR----FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT 799 (954)
Q Consensus 726 ~G~~~~--~~~----~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~ 799 (954)
+|.+.. +.. ......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++.......
T Consensus 78 ~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 151 (286)
T 2qmq_A 78 MEEGAPVFPLGYQYPSLDQLADMIPCILQYL------NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGW 151 (286)
T ss_dssp TSTTCCCCCTTCCCCCHHHHHHTHHHHHHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCH
T ss_pred CCCCCCCCCCCCCccCHHHHHHHHHHHHHHh------CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccch
Confidence 655432 221 3566677777777665 2358999999999999999999999999999999985432110
Q ss_pred C--------------------CCCcccc----chhhhc-------------HHHHH----hcCc----ccccCCCCCCEE
Q 002194 800 P--------------------FGFQNED----RTLWEA-------------TSTYV----EMSP----FMSANKLKKPIL 834 (954)
Q Consensus 800 ~--------------------~~~~~~~----~~~~~~-------------~~~~~----~~sp----~~~~~~~~~P~L 834 (954)
. ..+.... ....+. ...+. .... ...+.++++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 231 (286)
T 2qmq_A 152 MDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVM 231 (286)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEE
T ss_pred hhhhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEE
Confidence 0 0000000 000000 00010 0011 124567899999
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHHhCCC-cEEEEEeCCCCCcCCCcccHHHHHHHHHHHHH
Q 002194 835 LVHGEEDNNSGTLTMQSDRFFNALKGHGA-LCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (954)
Q Consensus 835 ii~G~~D~~v~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (954)
+++|++|..+| .. .+.++.... .+++++++++||... .+....+.+.|.+||+
T Consensus 232 ii~G~~D~~~~---~~----~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 232 LVVGDQAPHED---AV----VECNSKLDPTQTSFLKMADSGGQPQ-LTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EEEETTSTTHH---HH----HHHHHHSCGGGEEEEEETTCTTCHH-HHCHHHHHHHHHHHHC
T ss_pred EEecCCCcccc---HH----HHHHHHhcCCCceEEEeCCCCCccc-ccChHHHHHHHHHHhc
Confidence 99999998864 22 233333333 589999999999864 4556777888888874
No 330
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.36 E-value=1.7e-10 Score=139.95 Aligned_cols=290 Identities=10% Similarity=0.052 Sum_probs=172.5
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc-----e-eecccCCCccccccccceeEecCCeEEEEEe
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-----A-RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~-----~-~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (954)
..+..++|+||+..++.+.. .+ ..|.++++..+. . +.+..+... +..++|+|||++|+...
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s------~D--~~i~~W~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSAS------RD--KSIILWKLTKDDKAYGVAQRRLTGHSHF-----VEDVVLSSDGQFALSGS 449 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEE------TT--SEEEEEECCCSTTCSCEEEEEEECCSSC-----EEEEEECTTSSEEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEe------CC--CcEEEEEccCCCcccccccceecCCCCc-----EEEEEECCCCCEEEEEe
Confidence 46888999998755554432 33 455555554321 1 233333322 67899999999998761
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCC-cccccccc
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDP 339 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~-~~~~~~~~ 339 (954)
....|.++|+ ++. .+.+... ..+..++|
T Consensus 450 -------------------------------------------------~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 450 -------------------------------------------------WDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp -------------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred -------------------------------------------------CCCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 1235777788 664 3444444 77889999
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~ 419 (954)
||||++|+..+.+ +.|.+||..+.....+.... .++...+..++|+|++..-.+.+.
T Consensus 481 s~~~~~l~s~s~D-------------~~i~iwd~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~~l~s~- 537 (694)
T 3dm0_A 481 SLDNRQIVSASRD-------------RTIKLWNTLGECKYTISEGG---------EGHRDWVSCVRFSPNTLQPTIVSA- 537 (694)
T ss_dssp CTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSST---------TSCSSCEEEEEECSCSSSCEEEEE-
T ss_pred eCCCCEEEEEeCC-------------CEEEEEECCCCcceeeccCC---------CCCCCcEEEEEEeCCCCcceEEEE-
Confidence 9999999988744 38999998766544443211 012234567899999854333211
Q ss_pred ccCCCccccccCCCeEEEEecCCCCCCC-ceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002194 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (954)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 498 (954)
+..+.|.+|++ ..++ ...+..+...+..++|+|||+.|+..+.++. .+| +|+.++ ..+
T Consensus 538 ----------s~d~~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~--i~i--wd~~~~----~~~ 596 (694)
T 3dm0_A 538 ----------SWDKTVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV--VLL--WDLAEG----KKL 596 (694)
T ss_dssp ----------ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB--CEE--EETTTT----EEE
T ss_pred ----------eCCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe--EEE--EECCCC----ceE
Confidence 33557889996 4433 3455666777889999999999888765543 444 455553 222
Q ss_pred ecC-CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccc
Q 002194 499 FDR-SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYE 577 (954)
Q Consensus 499 ~~~-~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 577 (954)
... ....+.. +.|+|++.+++.... ..|++||+.+++..............
T Consensus 597 ~~~~~~~~v~~------~~~sp~~~~l~~~~~----------------------~~i~iwd~~~~~~~~~~~~~~~~~~~ 648 (694)
T 3dm0_A 597 YSLEANSVIHA------LCFSPNRYWLCAATE----------------------HGIKIWDLESKSIVEDLKVDLKAEAE 648 (694)
T ss_dssp ECCBCSSCEEE------EEECSSSSEEEEEET----------------------TEEEEEETTTTEEEEEECCCCC----
T ss_pred EEecCCCcEEE------EEEcCCCcEEEEEcC----------------------CCEEEEECCCCCChhhhccccccccc
Confidence 211 1111222 789999988876541 23899999988765443322110000
Q ss_pred e-----eE---EeccCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002194 578 T-----TV---ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (954)
Q Consensus 578 ~-----~~---~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~ 616 (954)
. .. .....-...+|||||+.|+.... -..+.+|++
T Consensus 649 ~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~----Dg~i~iW~i 691 (694)
T 3dm0_A 649 KADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT----DGVIRVWGI 691 (694)
T ss_dssp ------------CCCCEEEEEECTTSSEEEEEET----TSEEEEEEC
T ss_pred cccccccccCCceeEEeeeEEEcCCCCEEEEEcC----CCeEEEEec
Confidence 0 00 00000012579999998764333 245888875
No 331
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.36 E-value=8.9e-11 Score=135.97 Aligned_cols=247 Identities=9% Similarity=0.032 Sum_probs=141.3
Q ss_pred CCCCceecCCC---------CEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce-
Q 002194 110 PLPALSFSPQR---------DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE- 179 (954)
Q Consensus 110 ~~~~~~~SPDG---------~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~- 179 (954)
.+..++|+|++ ++||........ ...+++.......+.+..|.||++.+ ++....
T Consensus 135 ~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~--------------~~~~~~~~~laS~s~D~tI~iWd~~~-~~~~~~~ 199 (524)
T 2j04_B 135 LVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD--------------EPLNEHLEMFDKEKHSSCIQIFKMNT-STLHCVK 199 (524)
T ss_dssp --CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------CEEEEEEEEET-TTCCEEE
T ss_pred ceeEEEecccCCCCccCcCCeEEEEEEecccC--------------CccchhhhhhccCCCCceEEEEEccC-CCCCceE
Confidence 57789999998 788887653110 00112222222334446899999854 211111
Q ss_pred -eeeecCCCCCcccceeecCC------CCeEEEEEeeccccCCCCceEEEEEECCCCcee------------ecccCCCc
Q 002194 180 -IEIQGFPDGAKLNFVTWSQD------GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR------------PLFQSPDI 240 (954)
Q Consensus 180 -~~lt~~~~~~~~~~~~wSPD------G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~------------~lt~~~~~ 240 (954)
..+.. +...+..++|+|+ |+.||..+ .+ ..|.++++.+++.. .+.. ..
T Consensus 200 ~~~l~~--~~~~V~~v~wsp~~~~~~~~~~LAs~s-------~D--gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~- 266 (524)
T 2j04_B 200 VQTIVH--SFGEVWDLKWHEGCHAPHLVGCLSFVS-------QE--GTINFLEIIDNATDVHVFKMCEKPSLTLSL-AD- 266 (524)
T ss_dssp EEEEEE--CCCSEEEEEECSSCCCSSSSCEEEEEE-------TT--SCEEEEECCCCSSSSSEEECCCSCSEEECC-TT-
T ss_pred EEEEEe--cCCcEEEEEECCCCCCCCCCceEEEEe-------cC--CeEEEEEcCCCccccccceeecCceEEEEc-CC-
Confidence 12332 2235788999997 56777654 23 34555566554321 1111 11
Q ss_pred cccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEE
Q 002194 241 YLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (954)
Q Consensus 241 ~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~ 320 (954)
..+..++|++++ .|+... ..+.|.++|
T Consensus 267 ---~~v~sv~~s~~~-~lasgs-------------------------------------------------~DgtV~lWD 293 (524)
T 2j04_B 267 ---SLITTFDFLSPT-TVVCGF-------------------------------------------------KNGFVAEFD 293 (524)
T ss_dssp ---TCEEEEEESSSS-EEEEEE-------------------------------------------------TTSEEEEEE
T ss_pred ---CCEEEEEecCCC-eEEEEe-------------------------------------------------CCCEEEEEE
Confidence 226789999876 455441 224566778
Q ss_pred e-CCc-e-eEcCCC-cccccc--ccCCCC-cEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCc
Q 002194 321 L-DGT-V-KEIGPP-AVYTSL--DPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPI 392 (954)
Q Consensus 321 ~-~G~-~-~~l~~~-~~~~~~--~~SpDG-k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~ 392 (954)
+ ++. . ..+... ..+.++ .|+||| +.|+..+.+ +.+.|||+...+. ..+..+...
T Consensus 294 ~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-------------~tvklWD~~~~~~~~~~~~~~~~----- 355 (524)
T 2j04_B 294 LTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-------------GYFYIFNPKDIATTKTTVSRFRG----- 355 (524)
T ss_dssp TTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-------------SEEEEECGGGHHHHCEEEEECSC-----
T ss_pred CCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC-------------CeEEEEECCCCCccccccccccc-----
Confidence 7 553 2 223333 667777 689999 677777633 3899999975432 222211000
Q ss_pred cccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEE
Q 002194 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVY 472 (954)
Q Consensus 393 ~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~ 472 (954)
..+..++|+|||+.++.. +..+.|.+|++ ..+.....+..+...+..++|||||+.|+.
T Consensus 356 ------~~v~~v~fsp~~~~l~s~-------------~~d~tv~lwd~--~~~~~~~~l~gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 356 ------SNLVPVVYCPQIYSYIYS-------------DGASSLRAVPS--RAAFAVHPLVSRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp ------CSCCCEEEETTTTEEEEE-------------CSSSEEEEEET--TCTTCCEEEEECSSCEEEEECCSSCCBCEE
T ss_pred ------CcccceEeCCCcCeEEEe-------------CCCCcEEEEEC--cccccceeeecCCCceEEEEeCCCCCeEEE
Confidence 124578999999875544 33557889986 344445667778888999999999999887
Q ss_pred EEec
Q 002194 473 ESWY 476 (954)
Q Consensus 473 ~~~~ 476 (954)
++.+
T Consensus 415 gs~D 418 (524)
T 2j04_B 415 GSAD 418 (524)
T ss_dssp EETT
T ss_pred EECC
Confidence 7644
No 332
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.35 E-value=8e-12 Score=135.79 Aligned_cols=210 Identities=11% Similarity=0.007 Sum_probs=124.5
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++.... + .++.|.||++||.+.... .|.. .+..| +..|.|++ .|.+|+
T Consensus 28 ~~g~~l~y~~~---G-----~g~~~~vvllHG~~~~~~-----------~w~~----~~~~L-~~~~~via---~Dl~Gh 80 (318)
T 2psd_A 28 VLDSFINYYDS---E-----KHAENAVIFLHGNATSSY-----------LWRH----VVPHI-EPVARCII---PDLIGM 80 (318)
T ss_dssp ETTEEEEEEEC---C-----SCTTSEEEEECCTTCCGG-----------GGTT----TGGGT-TTTSEEEE---ECCTTS
T ss_pred eCCeEEEEEEc---C-----CCCCCeEEEECCCCCcHH-----------HHHH----HHHHh-hhcCeEEE---EeCCCC
Confidence 47777765442 1 122468999999743211 1211 12233 34579999 677788
Q ss_pred CCcccch---hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCC----C
Q 002194 727 GDEEAND---RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT----L 798 (954)
Q Consensus 727 G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~----~ 798 (954)
|.+.... .......+|+.+.++.+ +. +++.|+||||||.+|+.+|.++|++++++|++++..... .
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 154 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFELL------NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDE 154 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTTS------CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTT
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHhc------CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhh
Confidence 8885431 12344455555444332 33 689999999999999999999999999999976532110 0
Q ss_pred CCCC------Cccc--------c-------------chh-hhcHHHHH-----------------hcCcc----------
Q 002194 799 TPFG------FQNE--------D-------------RTL-WEATSTYV-----------------EMSPF---------- 823 (954)
Q Consensus 799 ~~~~------~~~~--------~-------------~~~-~~~~~~~~-----------------~~sp~---------- 823 (954)
.+.. +... . ... .+....|. ..-+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
T 2psd_A 155 WPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQ 234 (318)
T ss_dssp SCSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHH
T ss_pred hhhHHHHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHH
Confidence 0000 0000 0 000 00000000 00000
Q ss_pred ------cccCCC-CCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 824 ------MSANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 824 ------~~~~~~-~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
..+.++ ++|+|+|+|++| .++ . .+.++.+.+ ...+++++ ++||... .+..+.+.+.|.+||.+
T Consensus 235 ~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~--~-~~~~~~~~~----~~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 235 IVRNYNAYLRASDDLPKLFIESDPG-FFS--N-AIVEGAKKF----PNTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVER 304 (318)
T ss_dssp HHHHHHHHHHTCTTSCEEEEEEEEC-SSH--H-HHHHHHTTS----SSEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCeEEEEeccc-cCc--H-HHHHHHHhC----CCcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHH
Confidence 123456 899999999999 876 5 555554433 23577777 6799764 66788899999999987
Q ss_pred hcc
Q 002194 897 YCV 899 (954)
Q Consensus 897 ~l~ 899 (954)
...
T Consensus 305 ~~~ 307 (318)
T 2psd_A 305 VLK 307 (318)
T ss_dssp HHC
T ss_pred hhc
Confidence 643
No 333
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.35 E-value=6.6e-13 Score=141.48 Aligned_cols=224 Identities=14% Similarity=0.012 Sum_probs=115.6
Q ss_pred ceEEEEEEcCCCeE-EEEEEEcCCCCCCCC-----CCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC
Q 002194 638 QKELIKYQRKDGVQ-LSATLYLPPGYDPSK-----DGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR 711 (954)
Q Consensus 638 ~~~~~~~~~~~g~~-l~~~l~~P~~~~~~~-----~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 711 (954)
..|.+.|++.++.. ...|+..+.. .+.. ....|.||++||..... ..| ..++..|++
T Consensus 14 ~~~~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lvllHG~~~~~-----------~~~----~~l~~~L~~- 76 (280)
T 3qmv_A 14 GTENLYFQSNALLSQRSAWFPRPVA-APAAEPPDPAAAPLRLVCFPYAGGTV-----------SAF----RGWQERLGD- 76 (280)
T ss_dssp --------------CHHHHSCCCCC-CCCCCCCCTTTCSEEEEEECCTTCCG-----------GGG----TTHHHHHCT-
T ss_pred CcceeeeecchhhhhcchheecCCC-CCcccccccCCCCceEEEECCCCCCh-----------HHH----HHHHHhcCC-
Confidence 45677777766532 2233332211 1111 11138899999964211 112 124445554
Q ss_pred CcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCccc----
Q 002194 712 GFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC---- 785 (954)
Q Consensus 712 G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~---- 785 (954)
||.|++ .+..|+|.+.... .......+|+.+.++.+. ..+++.|+||||||.+|+.++.++|+++.
T Consensus 77 ~~~v~~---~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~-----~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~ 148 (280)
T 3qmv_A 77 EVAVVP---VQLPGRGLRLRERPYDTMEPLAEAVADALEEHR-----LTHDYALFGHSMGALLAYEVACVLRRRGAPRPR 148 (280)
T ss_dssp TEEEEE---CCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT-----CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CceEEE---EeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCce
Confidence 999999 6677888764332 234555666666555431 34689999999999999999999887665
Q ss_pred EEEEeccCCCCCCCCCC---Ccccc--------------------------chhhhcHHHHHhcCcccccCCCCCCEEEE
Q 002194 786 CGIARSGAYNRTLTPFG---FQNED--------------------------RTLWEATSTYVEMSPFMSANKLKKPILLV 836 (954)
Q Consensus 786 a~v~~~~~~~~~~~~~~---~~~~~--------------------------~~~~~~~~~~~~~sp~~~~~~~~~P~Lii 836 (954)
.+++.+........... ..... ............+.+ ..+.++++|+|++
T Consensus 149 ~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i 227 (280)
T 3qmv_A 149 HLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDW-HPRPPLDCPTTAF 227 (280)
T ss_dssp CEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCCC-CCCCCBCSCEEEE
T ss_pred EEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhccc-cCCCceecCeEEE
Confidence 55555432110000000 00000 000000111111111 1246788999999
Q ss_pred EeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCC-cccHHHHHHHHHHH
Q 002194 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA-RESIMHVLWETDRW 893 (954)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~-~~~~~~~~~~i~~f 893 (954)
+|++|..++ ...+.++.+.+ ...++++++++ ||.... .+....+.+.|.+|
T Consensus 228 ~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 228 SAAADPIAT--PEMVEAWRPYT---TGSFLRRHLPG-NHFFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp EEEECSSSC--HHHHHTTGGGB---SSCEEEEEEEE-ETTGGGSSHHHHHHHHHHHTT
T ss_pred EecCCCCcC--hHHHHHHHHhc---CCceEEEEecC-CCeEEcCchhHHHHHHHHHhh
Confidence 999999998 77776665543 23467888886 898643 24444555555544
No 334
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.34 E-value=3e-10 Score=122.36 Aligned_cols=273 Identities=13% Similarity=0.062 Sum_probs=166.8
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
..+....| |||+.|+... ....|.++++++++........... +..++|+|||+.|+...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~---------~dg~v~vw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~------ 78 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVS---------RDGTVRLWSKDDQWLGTVVYTGQGF----LNSVCYDSEKELLLFGG------ 78 (313)
T ss_dssp SCEEEEEE-EETTEEEEEE---------TTSEEEEEEESSSEEEEEEEECSSC----EEEEEEETTTTEEEEEE------
T ss_pred CCcEEEEe-cCCCEEEEEE---------cCCcEEEEECCCCEEEEEeecCCcc----EEEEEECCCCCEEEEec------
Confidence 46888899 9999988754 2456777787777655444333322 77899999999998761
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC---c-eeEcCCC-ccccccccCCC
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---T-VKEIGPP-AVYTSLDPSPD 342 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G---~-~~~l~~~-~~~~~~~~SpD 342 (954)
....|..+++ +. + ...+... ..+..+.| +
T Consensus 79 -------------------------------------------~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 79 -------------------------------------------KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp -------------------------------------------TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--E
T ss_pred -------------------------------------------CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--c
Confidence 1123445555 22 1 2333333 55666677 6
Q ss_pred CcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc-CCCCceEEEEecc
Q 002194 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYWAETQD 421 (954)
Q Consensus 343 Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp-Dg~~i~~~~~~~~ 421 (954)
++.|+..+.+ +.+.+|| .+.....+..+. ..+..+.|+| +++.++..
T Consensus 114 ~~~l~~~~~d-------------~~i~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~l~~~----- 161 (313)
T 3odt_A 114 DGVVISGSWD-------------KTAKVWK-EGSLVYNLQAHN-------------ASVWDAKVVSFSENKFLTA----- 161 (313)
T ss_dssp TTEEEEEETT-------------SEEEEEE-TTEEEEEEECCS-------------SCEEEEEEEETTTTEEEEE-----
T ss_pred CCEEEEEeCC-------------CCEEEEc-CCcEEEecccCC-------------CceeEEEEccCCCCEEEEE-----
Confidence 7888877633 3899999 433334433322 2345678888 77765554
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEEee-cccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~ 500 (954)
+..+.+.+|+. +.....+.. ....+..++|+|+++ ++....+ ..|.++|+.++ +......
T Consensus 162 --------~~d~~i~i~d~----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d----g~i~i~d~~~~--~~~~~~~ 222 (313)
T 3odt_A 162 --------SADKTIKLWQN----DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSND----GLIKLVDMHTG--DVLRTYE 222 (313)
T ss_dssp --------ETTSCEEEEET----TEEEEEECSSCSSCEEEEEEEETTE-EEEEETT----SEEEEEETTTC--CEEEEEE
T ss_pred --------ECCCCEEEEec----CceEEEEeccCcccEEEEEEcCCCe-EEEccCC----CeEEEEECCch--hhhhhhh
Confidence 33557888883 333334433 556678899999999 5554433 34777777764 3344344
Q ss_pred CCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeE
Q 002194 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (954)
Q Consensus 501 ~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 580 (954)
.+...+.. +.|+|+|+ ++... ....|++||+.+++.......... .+.
T Consensus 223 ~~~~~i~~------~~~~~~~~-l~~~~---------------------~dg~v~iwd~~~~~~~~~~~~~~~----~i~ 270 (313)
T 3odt_A 223 GHESFVYC------IKLLPNGD-IVSCG---------------------EDRTVRIWSKENGSLKQVITLPAI----SIW 270 (313)
T ss_dssp CCSSCEEE------EEECTTSC-EEEEE---------------------TTSEEEEECTTTCCEEEEEECSSS----CEE
T ss_pred cCCceEEE------EEEecCCC-EEEEe---------------------cCCEEEEEECCCCceeEEEeccCc----eEE
Confidence 34333443 78999995 44443 123599999998887665544321 112
Q ss_pred EeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCce
Q 002194 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (954)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~ 621 (954)
...|++|++ ++. ... ...+++|++.+++.
T Consensus 271 -------~~~~~~~~~-~~~-~~~---dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 271 -------SVDCMSNGD-IIV-GSS---DNLVRIFSQEKSRW 299 (313)
T ss_dssp -------EEEECTTSC-EEE-EET---TSCEEEEESCGGGC
T ss_pred -------EEEEccCCC-EEE-EeC---CCcEEEEeCCCCce
Confidence 246899998 333 222 35689999877654
No 335
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.33 E-value=1.8e-10 Score=123.68 Aligned_cols=226 Identities=12% Similarity=0.126 Sum_probs=135.7
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCC--ce-eecccCCCccccccccceeEecC--CeEEEEEec
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG--KA-RPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIP 263 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g--~~-~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~~ 263 (954)
..+...+|||||++||... . ...|.+++++++ +. ..+..+.. .+..++|+++ |++|+...
T Consensus 10 ~~V~~~~~s~~g~~las~s-------~--D~~v~iw~~~~~~~~~~~~l~gH~~-----~V~~v~~s~~~~g~~l~s~s- 74 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCS-------S--DKTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCS- 74 (297)
T ss_dssp SCEEEEEECTTSSEEEEEE-------T--TSCEEEEEBCSSCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEEE-
T ss_pred CceEEEEECCCCCEEEEEe-------C--CCEEEEEecCCCCcEEEEEEccccC-----CeEEEEecCCCcCCEEEEEc-
Confidence 3678899999999998865 2 345555566543 22 22322222 2678999864 88888661
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc---eeEcCCC-ccccccc
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLD 338 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~---~~~l~~~-~~~~~~~ 338 (954)
....|.++++ +|. ...+... ..+..++
T Consensus 75 ------------------------------------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~ 106 (297)
T 2pm7_B 75 ------------------------------------------------YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQ 106 (297)
T ss_dssp ------------------------------------------------TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEE
T ss_pred ------------------------------------------------CCCEEEEEEcCCCceEEEEEeecCCCceeEEE
Confidence 1234666677 553 2233333 6788899
Q ss_pred cCCC--CcEEEEEeecCCcccccccCCCCcceEEEeccCce-E--EEeccCCCcccCCccccccccCccceeeccCC---
Q 002194 339 PSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-V--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDK--- 410 (954)
Q Consensus 339 ~SpD--Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg--- 410 (954)
|+|| |+.|+..+.+ +.+.+||+..+. . ..+. +....+..++|+|++
T Consensus 107 ~~p~~~g~~l~s~s~d-------------~~v~~wd~~~~~~~~~~~~~-------------~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 107 WAPHEYGPMLLVASSD-------------GKVSVVEFKENGTTSPIIID-------------AHAIGVNSASWAPATIEE 160 (297)
T ss_dssp ECCGGGCSEEEEEETT-------------SEEEEEEBCSSSCBCCEEEE-------------CCSSCEEEEEECCCC---
T ss_pred eCcCCCCcEEEEEECC-------------CcEEEEEecCCCceeeeeee-------------cccCccceEeecCCcccc
Confidence 9998 8888887743 389999987542 1 1111 222456778999974
Q ss_pred ----------CCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC-----ceEEeecccccCceeeccCC---ceEEE
Q 002194 411 ----------PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-----PEILHKLDLRYGGISWCDDS---LALVY 472 (954)
Q Consensus 411 ----------~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-----~~~l~~~~~~~~~~~~spDg---~~l~~ 472 (954)
+.|+.. +..+.|.+|++ ..++ ...+..+...+..++|+|++ +.|+.
T Consensus 161 ~~~~~~~~~~~~l~sg-------------s~D~~v~lwd~---~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTG-------------GADNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp ---------CCEEEEE-------------ETTSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred cccCCCCCCcceEEEE-------------cCCCcEEEEEE---cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence 323222 33457888885 3322 12344566678899999996 66666
Q ss_pred EEeccccceEEEEEcCCCCCCCcEEEe--cCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 473 ESWYKTRRTRTWVISPGSKDVAPRILF--DRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 473 ~~~~~~~~~~l~~~d~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
.+.++. .+||.++...+. ....+. ......+.. ++|+|||++|+...
T Consensus 225 ~s~D~~--v~iWd~~~~~~~-~~~~~~~~~~~~~~v~~------~~~s~~g~~las~~ 273 (297)
T 2pm7_B 225 VSQDRT--CIIWTQDNEQGP-WKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (297)
T ss_dssp EETTSC--EEEEEESSTTSC-CEEEESSSSCCSSCEEE------EEECSSSCCEEEEE
T ss_pred EECCCc--EEEEEeCCCCCc-cceeeeecccCCCcEEE------EEECCCCCEEEEEc
Confidence 655443 778877653321 111122 111222222 78999999998776
No 336
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.33 E-value=1.3e-10 Score=128.38 Aligned_cols=264 Identities=13% Similarity=0.074 Sum_probs=159.9
Q ss_pred CCCCceecCC---CCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCce-eeeecC
Q 002194 110 PLPALSFSPQ---RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGF 185 (954)
Q Consensus 110 ~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~-~~lt~~ 185 (954)
.+..++|||| |++|+....+ +.|.+|++...+ ... ..+..
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~d---------------------------------g~i~iw~~~~~~--~~~~~~~~~- 84 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWA---------------------------------NDVRCWEVQDSG--QTIPKAQQM- 84 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETT---------------------------------SEEEEEEECTTS--CEEEEEEEE-
T ss_pred ceEEEEEcCCCCCceEEEEECCC---------------------------------CcEEEEEcCCCC--ceeEEEecc-
Confidence 5778999999 6899888765 579999996422 222 33433
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeE--ecCCeEEEEEec
Q 002194 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW--VNNSTLLVCTIP 263 (954)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w--spDG~~l~~~~~ 263 (954)
+...+..+.|+|||+.|+.... ...|.++|+++++...+...... +..+.| +|||+.|+...
T Consensus 85 -h~~~v~~~~~~~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~l~~~~- 148 (368)
T 3mmy_A 85 -HTGPVLDVCWSDDGSKVFTASC---------DKTAKMWDLSSNQAIQIAQHDAP-----VKTIHWIKAPNYSCVMTGS- 148 (368)
T ss_dssp -CSSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTTEEEEEEECSSC-----EEEEEEEECSSCEEEEEEE-
T ss_pred -ccCCEEEEEECcCCCEEEEEcC---------CCcEEEEEcCCCCceeeccccCc-----eEEEEEEeCCCCCEEEEcc-
Confidence 2346889999999999987552 45788889998887766544433 678999 89999888761
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCCccccccccCC
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPSP 341 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~~~~~~~~~Sp 341 (954)
....|.++|+ +++. ..+..........++
T Consensus 149 ------------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~- 179 (368)
T 3mmy_A 149 ------------------------------------------------WDKTLKFWDTRSSNPMMVLQLPERCYCADVI- 179 (368)
T ss_dssp ------------------------------------------------TTSEEEEECSSCSSCSEEEECSSCEEEEEEE-
T ss_pred ------------------------------------------------CCCcEEEEECCCCcEEEEEecCCCceEEEec-
Confidence 1234777777 5543 333332333334444
Q ss_pred CCcEEEEEeecCCcccccccCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCC----ceE
Q 002194 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS----TLY 415 (954)
Q Consensus 342 DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~----i~~ 415 (954)
+..++..... +.+.+|+++.... ..+.. ... .....+.+.+++.. ++.
T Consensus 180 -~~~~~~~~~~-------------~~i~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 180 -YPMAVVATAE-------------RGLIVYQLENQPSEFRRIES-PLK-----------HQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp -TTEEEEEEGG-------------GCEEEEECSSSCEEEEECCC-SCS-----------SCEEEEEEEECTTSCEEEEEE
T ss_pred -CCeeEEEeCC-------------CcEEEEEeccccchhhhccc-ccc-----------CCCceEEEcccCCCCCCeEEE
Confidence 3455555432 2788999885432 22211 100 11123444444432 322
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCC----ceEEeeccc------------ccCceeeccCCceEEEEEecccc
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDL------------RYGGISWCDDSLALVYESWYKTR 479 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~----~~~l~~~~~------------~~~~~~~spDg~~l~~~~~~~~~ 479 (954)
. +..+.+.+|++ .... ...+..+.. .+..++|+|||+.|+..+.++
T Consensus 234 ~-------------~~dg~i~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-- 295 (368)
T 3mmy_A 234 G-------------SIEGRVAIHYI---NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-- 295 (368)
T ss_dssp E-------------ETTSEEEEEES---SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS--
T ss_pred e-------------cCCCcEEEEec---CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC--
Confidence 2 33557788886 3221 223333222 477899999999998876543
Q ss_pred ceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 480 RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 480 ~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
.|.++|+.++ +.......+...+.. ++|+|||++|+...
T Consensus 296 --~i~iwd~~~~--~~~~~~~~~~~~v~~------~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 296 --RFSFWDKDAR--TKLKTSEQLDQPISA------CCFNHNGNIFAYAS 334 (368)
T ss_dssp --CEEEEETTTT--EEEEECCCCSSCEEE------EEECTTSSCEEEEE
T ss_pred --eEEEEECCCC--cEEEEecCCCCCceE------EEECCCCCeEEEEe
Confidence 2555666664 333333333333333 88999999999887
No 337
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.00 E-value=1.2e-13 Score=148.45 Aligned_cols=197 Identities=11% Similarity=0.029 Sum_probs=118.5
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccch-------hhHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND-------RFVEQLVAC 742 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~-------~~~~~~~~D 742 (954)
.|+||++||.+... ..|. ..+..|+ +||.|++ .+..|+|.+.... .......+|
T Consensus 25 ~p~vv~lHG~~~~~-----------~~~~----~~~~~l~-~g~~v~~---~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (304)
T 3b12_A 25 GPALLLLHGFPQNL-----------HMWA----RVAPLLA-NEYTVVC---ADLRGYGGSSKPVGAPDHANYSFRAMASD 85 (304)
Confidence 47899999964211 1121 2334455 8999999 6667888875542 112334555
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCC---------------------C
Q 002194 743 AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP---------------------F 801 (954)
Q Consensus 743 ~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~---------------------~ 801 (954)
+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++........ .
T Consensus 86 l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
T 3b12_A 86 QRELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPY 159 (304)
Confidence 55555554 34589999999999999999999999999999998754311000 0
Q ss_pred ----------CCccc-c-c------hhh--hcHHHH-----------------Hhc---C----cccccCCCCCCEEEEE
Q 002194 802 ----------GFQNE-D-R------TLW--EATSTY-----------------VEM---S----PFMSANKLKKPILLVH 837 (954)
Q Consensus 802 ----------~~~~~-~-~------~~~--~~~~~~-----------------~~~---s----p~~~~~~~~~P~Lii~ 837 (954)
.+... . . ... +..+.+ ... + ....+.++++|+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 239 (304)
T 3b12_A 160 PEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFS 239 (304)
Confidence 00000 0 0 000 000000 000 0 0001567889999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
|++|..++ +......+.+.+. +++++++ ++||... .++...+.+.|.+||++..
T Consensus 240 G~~D~~~~-~~~~~~~~~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~ 293 (304)
T 3b12_A 240 GSAGLMHS-LFEMQVVWAPRLA----NMRFASL-PGGHFFV-DRFPDDTARILREFLSDAR 293 (304)
Confidence 99996553 0333333333322 3577778 9999864 5666788888999998764
No 338
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.32 E-value=2.1e-10 Score=127.32 Aligned_cols=230 Identities=13% Similarity=0.120 Sum_probs=139.5
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecC--CeEEEEEecCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPLLR 266 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~~~~~ 266 (954)
..+..++|||||++|+... .++...||-++..+++.......... .+..+.|+++ ++.|+...
T Consensus 12 ~~v~~~~~s~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~l~s~~---- 76 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCS-------SDKTIKIFEVEGETHKLIDTLTGHEG----PVWRVDWAHPKFGTILASCS---- 76 (379)
T ss_dssp CCEEEEEECSSSSEEEEEE-------TTSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE----
T ss_pred ccEEEEEEcCCCCEEEEEE-------CCCcEEEEecCCCcceeeeEecCCCC----cEEEEEeCCCCCCCEEEEec----
Confidence 4688899999999998865 33444555443223333222222222 2678999977 88888661
Q ss_pred CCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc---eeEcCCC-ccccccccCC
Q 002194 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDPSP 341 (954)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~---~~~l~~~-~~~~~~~~Sp 341 (954)
....|.++++ +++ ...+... ..+..++|+|
T Consensus 77 ---------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 111 (379)
T 3jrp_A 77 ---------------------------------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 111 (379)
T ss_dssp ---------------------------------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred ---------------------------------------------cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCC
Confidence 1234666777 663 3334434 7788999999
Q ss_pred C--CcEEEEEeecCCcccccccCCCCcceEEEeccCceE---EEeccCCCcccCCccccccccCccceeecc--------
Q 002194 342 D--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRS-------- 408 (954)
Q Consensus 342 D--Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp-------- 408 (954)
+ |+.|+..+.+ +.+.+||+..... ..+.. ....+..+.|+|
T Consensus 112 ~~~~~~l~~~~~d-------------~~i~v~d~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 112 HEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIIIDA-------------HAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp GGGCSEEEEEETT-------------SEEEEEECCTTSCCCEEEEEC-------------CTTCEEEEEECCCC------
T ss_pred CCCCCEEEEecCC-------------CcEEEEecCCCCceeeEEecC-------------CCCceEEEEEcCcccccccc
Confidence 9 9999888743 3899999985421 11211 123456789999
Q ss_pred -----CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc----eEEeecccccCceeeccC---CceEEEEEec
Q 002194 409 -----DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP----EILHKLDLRYGGISWCDD---SLALVYESWY 476 (954)
Q Consensus 409 -----Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~----~~l~~~~~~~~~~~~spD---g~~l~~~~~~ 476 (954)
|++.++.. +..+.|.+|++ ..+... ..+..+...+..++|+|| ++.|+....+
T Consensus 166 ~~~~~~~~~l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 166 HNGTKESRKFVTG-------------GADNLVKIWKY--NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp ----CTTCEEEEE-------------ETTSCEEEEEE--ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred ccCCCCCCEEEEE-------------eCCCeEEEEEe--cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 57765554 33557888886 222222 223345666788999999 7777776544
Q ss_pred cccceEEEEEcCCCCCCCcEEEecC--CCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 477 KTRRTRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 477 ~~~~~~l~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
+. .+||.++..... ....+... ....+.. ++|+|||++|+...
T Consensus 231 g~--i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~------~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 231 RT--CIIWTQDNEQGP-WKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 275 (379)
T ss_dssp SC--EEEEEESSTTSC-CEEEESSSSCCSSCEEE------EEECSSSCCEEEEE
T ss_pred CE--EEEEeCCCCCcc-ceeeeeccccCCCcEEE------EEEcCCCCEEEEec
Confidence 33 667766544321 11222211 1122222 78999999988876
No 339
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.32 E-value=2.4e-11 Score=128.08 Aligned_cols=195 Identities=14% Similarity=0.120 Sum_probs=113.2
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (954)
.|.||++||..... ..| ...+..|++.||.|++ .|.+|+|.+..... ..++++.+.+..
T Consensus 16 ~~~vvllHG~~~~~-----------~~w----~~~~~~L~~~~~~vi~---~Dl~GhG~S~~~~~---~~~~~~a~~l~~ 74 (264)
T 1r3d_A 16 TPLVVLVHGLLGSG-----------ADW----QPVLSHLARTQCAALT---LDLPGHGTNPERHC---DNFAEAVEMIEQ 74 (264)
T ss_dssp BCEEEEECCTTCCG-----------GGG----HHHHHHHTTSSCEEEE---ECCTTCSSCC----------CHHHHHHHH
T ss_pred CCcEEEEcCCCCCH-----------HHH----HHHHHHhcccCceEEE---ecCCCCCCCCCCCc---cCHHHHHHHHHH
Confidence 37899999963211 111 1344455558999999 67778888754321 122333333333
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHH---HHHhCCCcccEEEEeccCCCCCCCC-----------CC--Cc----cc---
Q 002194 750 VVRRGVAHPSKIAVGGHSYGAFMTAN---LLAHAPHLFCCGIARSGAYNRTLTP-----------FG--FQ----NE--- 806 (954)
Q Consensus 750 l~~~~~~d~~ri~l~G~S~GG~~a~~---~a~~~p~~~~a~v~~~~~~~~~~~~-----------~~--~~----~~--- 806 (954)
+.+.-.++..++.++||||||.+++. ++.++|++++++|++++........ +. +. ..
T Consensus 75 ~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
T 1r3d_A 75 TVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLS 154 (264)
T ss_dssp HHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHH
Confidence 33332233224999999999999999 7788999999999987643211000 00 00 00
Q ss_pred ---cchhhh-----c------------H----HHHHhc------CcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHH
Q 002194 807 ---DRTLWE-----A------------T----STYVEM------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFN 856 (954)
Q Consensus 807 ---~~~~~~-----~------------~----~~~~~~------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~ 856 (954)
....+. . . ..+... +....+.++++|+|+++|++|..++ .+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-------~~~~ 227 (264)
T 1r3d_A 155 DWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLAE 227 (264)
T ss_dssp HHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHHH
T ss_pred HHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-------HHHH
Confidence 000000 0 0 000000 1112345788999999999996431 2233
Q ss_pred HHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 857 ALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 857 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
.+. +++++++++||... .+..+.+.+.|.+|+.++.
T Consensus 228 ~~~-----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 228 SSG-----LSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHC-----SEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HhC-----CcEEEcCCCCCchh-hcCHHHHHHHHHHHHHHhc
Confidence 321 46889999999863 5667888999999998753
No 340
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.29 E-value=1.5e-09 Score=124.59 Aligned_cols=256 Identities=12% Similarity=0.085 Sum_probs=152.4
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
+.|.+|++.. + .....+.+ +...+....|+||+ .|+... ....|.++|+++++...........
T Consensus 142 g~i~vwd~~~-~--~~~~~~~~--h~~~V~~l~~~~~~-~l~s~s---------~dg~i~vwd~~~~~~~~~~~~h~~~- 205 (464)
T 3v7d_B 142 KMIRVYDSIN-K--KFLLQLSG--HDGGVWALKYAHGG-ILVSGS---------TDRTVRVWDIKKGCCTHVFEGHNST- 205 (464)
T ss_dssp SCEEEEETTT-T--EEEEEECC--CSSCEEEEEECSTT-EEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC-
T ss_pred CcEEEEECCC-C--cEEEEEeC--CCcCEEEEEEcCCC-EEEEEe---------CCCCEEEEECCCCcEEEEECCCCCc-
Confidence 5899999854 2 22333433 33478899999998 555533 2456778888888765554433322
Q ss_pred cccccceeEe--cCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEE
Q 002194 243 NAIFDNFVWV--NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (954)
Q Consensus 243 ~~~~~~~~ws--pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~ 320 (954)
+..+.|+ +|++.|+....+. .|.+++
T Consensus 206 ---v~~l~~~~~~~~~~l~s~s~d~-------------------------------------------------~i~vwd 233 (464)
T 3v7d_B 206 ---VRCLDIVEYKNIKYIVTGSRDN-------------------------------------------------TLHVWK 233 (464)
T ss_dssp ---EEEEEEEESSSCEEEEEEETTS-------------------------------------------------CEEEEE
T ss_pred ---cEEEEEecCCCCCEEEEEcCCC-------------------------------------------------cEEEee
Confidence 6677787 6788888762211 122222
Q ss_pred e-CCc------------------------eeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc
Q 002194 321 L-DGT------------------------VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (954)
Q Consensus 321 ~-~G~------------------------~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~ 374 (954)
+ ++. ...+... ..+ .+++++|+.|+..+.+ +.+.+||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d-------------~~i~vwd~~ 298 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYD-------------NTLIVWDVA 298 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE--EEEEEETTEEEEEETT-------------SCEEEEETT
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE--EEEcCCCCEEEEEeCC-------------CeEEEEECC
Confidence 2 111 1111111 222 3458899999888743 389999998
Q ss_pred CceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEee
Q 002194 375 GIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK 453 (954)
Q Consensus 375 g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~ 453 (954)
.++. ..+..+ ...+..+.|+|||+.++.. +..+.|.+|++ .++.....+..
T Consensus 299 ~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~sg-------------~~dg~i~vwd~--~~~~~~~~~~~ 350 (464)
T 3v7d_B 299 QMKCLYILSGH-------------TDRIYSTIYDHERKRCISA-------------SMDTTIRIWDL--ENGELMYTLQG 350 (464)
T ss_dssp TTEEEEEECCC-------------SSCEEEEEEETTTTEEEEE-------------ETTSCEEEEET--TTTEEEEEECC
T ss_pred CCcEEEEecCC-------------CCCEEEEEEcCCCCEEEEE-------------eCCCcEEEEEC--CCCcEEEEEeC
Confidence 6553 333222 1345679999999976654 34567999996 23333344555
Q ss_pred cccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccC
Q 002194 454 LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKEND 533 (954)
Q Consensus 454 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~ 533 (954)
+...+..+.|+ ++.|+..+.++ .|.++|+.++ ....... .... ...+.|+++|+.++...
T Consensus 351 h~~~v~~~~~~--~~~l~s~s~dg----~v~vwd~~~~--~~~~~~~-~~~~------~~~~~~~~~~~~l~~~~----- 410 (464)
T 3v7d_B 351 HTALVGLLRLS--DKFLVSAAADG----SIRGWDANDY--SRKFSYH-HTNL------SAITTFYVSDNILVSGS----- 410 (464)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTS----EEEEEETTTC--CEEEEEE-CTTC------CCEEEEEECSSEEEEEE-----
T ss_pred CCCcEEEEEEc--CCEEEEEeCCC----cEEEEECCCC--ceeeeec-CCCC------ccEEEEEeCCCEEEEec-----
Confidence 66667778886 56676665443 3556666664 2222221 1111 11167999999887765
Q ss_pred CCcEEEEecCCCCCCCCCCeEEEEECCCCCeEE
Q 002194 534 EGTYILLNGNGATPEGNIPFLDLFDINTGSKER 566 (954)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 566 (954)
...+++||+.+++...
T Consensus 411 -----------------dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 411 -----------------ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp -----------------TTEEEEEETTTCCEEE
T ss_pred -----------------CCeEEEEECCCCcEEe
Confidence 1249999999988654
No 341
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.29 E-value=1.1e-12 Score=140.58 Aligned_cols=168 Identities=14% Similarity=0.155 Sum_probs=105.9
Q ss_pred HCCcEEEEcCCCCCCCCCCcc-cc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccE
Q 002194 710 ARGFAILGGPTTPIIGEGDEE-AN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~-~~--~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a 786 (954)
++||.|++ .+.+|+|.+. .. ........+|+.+.++.+ ..+++.++|||+||.+++.++.++|+++++
T Consensus 67 ~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 137 (292)
T 3l80_A 67 PDSIGILT---IDAPNSGYSPVSNQANVGLRDWVNAILMIFEHF------KFQSYLLCVHSIGGFAALQIMNQSSKACLG 137 (292)
T ss_dssp CTTSEEEE---ECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHS------CCSEEEEEEETTHHHHHHHHHHHCSSEEEE
T ss_pred hhcCeEEE---EcCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEEchhHHHHHHHHHhCchheee
Confidence 37999999 6667888876 22 123455566665555443 335899999999999999999999999999
Q ss_pred EEEeccCCCCC----CCC------------CC----------------Ccccc-chhh----hcHHHHHhcCc-------
Q 002194 787 GIARSGAYNRT----LTP------------FG----------------FQNED-RTLW----EATSTYVEMSP------- 822 (954)
Q Consensus 787 ~v~~~~~~~~~----~~~------------~~----------------~~~~~-~~~~----~~~~~~~~~sp------- 822 (954)
+|+++|..... ... .. +.... ...+ .....+....+
T Consensus 138 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (292)
T 3l80_A 138 FIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIR 217 (292)
T ss_dssp EEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSS
T ss_pred EEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchh
Confidence 99998432100 000 00 00000 0000 00011112222
Q ss_pred --------ccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHH
Q 002194 823 --------FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (954)
Q Consensus 823 --------~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (954)
...+.+ ++|+|+++|++|..++ .+ + ++.+.+ ...+ +++++++|... .+..+.+.+.|.+||
T Consensus 218 ~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~--~~-~-~~~~~~----~~~~-~~~~~~gH~~~-~e~p~~~~~~i~~fl 286 (292)
T 3l80_A 218 LALGEEDFKTGISE-KIPSIVFSESFREKEY--LE-S-EYLNKH----TQTK-LILCGQHHYLH-WSETNSILEKVEQLL 286 (292)
T ss_dssp CCCCGGGGCCCCCT-TSCEEEEECGGGHHHH--HT-S-TTCCCC----TTCE-EEECCSSSCHH-HHCHHHHHHHHHHHH
T ss_pred hhhcchhhhhccCC-CCCEEEEEccCccccc--hH-H-HHhccC----CCce-eeeCCCCCcch-hhCHHHHHHHHHHHH
Confidence 123344 7899999999999876 55 4 444322 2245 88999999764 566778889999999
Q ss_pred HHh
Q 002194 895 QKY 897 (954)
Q Consensus 895 ~~~ 897 (954)
+++
T Consensus 287 ~~~ 289 (292)
T 3l80_A 287 SNH 289 (292)
T ss_dssp HTC
T ss_pred Hhc
Confidence 865
No 342
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.29 E-value=1.1e-09 Score=122.71 Aligned_cols=291 Identities=8% Similarity=0.047 Sum_probs=163.7
Q ss_pred CcccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCC---------CccccccccceeEec-CCeE
Q 002194 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSP---------DIYLNAIFDNFVWVN-NSTL 257 (954)
Q Consensus 189 ~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~---------~~~~~~~~~~~~wsp-DG~~ 257 (954)
..+..+.|+| ||+.|+.... ...|.++++++++........ .......+..+.|+| +++.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS---------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET---------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred CcEEEEEEecCCCCEEEEEcC---------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 4789999999 9999888652 446777787776543332100 000122367899999 6666
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-cccc
Q 002194 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYT 335 (954)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~ 335 (954)
|+... ....|.++++ +++....... ..+.
T Consensus 115 l~s~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~ 145 (408)
T 4a11_B 115 FTSSS-------------------------------------------------FDKTLKVWDTNTLQTADVFNFEETVY 145 (408)
T ss_dssp EEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred EEEEe-------------------------------------------------CCCeEEEeeCCCCccceeccCCCcee
Confidence 76551 1235777788 6654333322 4555
Q ss_pred ccccCC---CCcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCC
Q 002194 336 SLDPSP---DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (954)
Q Consensus 336 ~~~~Sp---DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~ 411 (954)
...|+| +++.++....+ +.+.+||+..++ ...+..+ ...+..++|+||++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~-------------~~v~~~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 146 SHHMSPVSTKHCLVAVGTRG-------------PKVQLCDLKSGSCSHILQGH-------------RQEILAVSWSPRYD 199 (408)
T ss_dssp EEEECSSCSSCCEEEEEESS-------------SSEEEEESSSSCCCEEECCC-------------CSCEEEEEECSSCT
T ss_pred eeEeecCCCCCcEEEEEcCC-------------CeEEEEeCCCcceeeeecCC-------------CCcEEEEEECCCCC
Confidence 666666 55577777633 389999998553 3333322 13456799999999
Q ss_pred CceEEEEeccCCCccccccCCCeEEEEecCCCCCC-CceEE---------------eecccccCceeeccCCceEEEEEe
Q 002194 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE-GPEIL---------------HKLDLRYGGISWCDDSLALVYESW 475 (954)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~l---------------~~~~~~~~~~~~spDg~~l~~~~~ 475 (954)
.+++.. +..+.|.+|++ ..+. ....+ ..+...+..++|+|||+.|+....
T Consensus 200 ~ll~~~------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 200 YILATA------------SADSRVKLWDV--RRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp TEEEEE------------ETTSCEEEEET--TCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEE------------cCCCcEEEEEC--CCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 755441 23457888886 2222 22222 234455677899999999988765
Q ss_pred ccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeee-ccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeE
Q 002194 476 YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (954)
Q Consensus 476 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 554 (954)
++ .|.++++.++. ......... ..... ......+ ...+..+++... ...|
T Consensus 266 dg----~i~vwd~~~~~-~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~---------------------~~~i 316 (408)
T 4a11_B 266 DN----RMRLWNSSNGE-NTLVNYGKV-CNNSK--KGLKFTVSCGCSSEFVFVPY---------------------GSTI 316 (408)
T ss_dssp TS----CEEEEETTTCC-BCCCCCCCC-CCCCS--SCCCCEECCSSSSCEEEEEE---------------------TTEE
T ss_pred CC----eEEEEECCCCc-cceeccccc-ccccc--ccceeEEecCCCceEEEEec---------------------CCEE
Confidence 43 25555666542 111111100 00000 0000112 222333333331 1359
Q ss_pred EEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCce
Q 002194 555 DLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (954)
Q Consensus 555 ~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~ 621 (954)
++||+.+++.......... .+. ..+|+||++.++..... ..+++|++.+++.
T Consensus 317 ~v~d~~~~~~~~~~~~~~~----~v~-------~~~~s~~~~~l~s~~~d----g~i~iw~~~~~~~ 368 (408)
T 4a11_B 317 AVYTVYSGEQITMLKGHYK----TVD-------CCVFQSNFQELYSGSRD----CNILAWVPSLYEP 368 (408)
T ss_dssp EEEETTTCCEEEEECCCSS----CEE-------EEEEETTTTEEEEEETT----SCEEEEEECC---
T ss_pred EEEECcCCcceeeeccCCC----eEE-------EEEEcCCCCEEEEECCC----CeEEEEeCCCCCc
Confidence 9999998887655543321 122 24689999877744433 4588999877653
No 343
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.29 E-value=2.2e-10 Score=126.45 Aligned_cols=287 Identities=12% Similarity=0.105 Sum_probs=165.5
Q ss_pred CcccceeecCC---CCeEEEEEeeccccCCCCceEEEEEECCCCce-eecccCCCccccccccceeEecC----CeEEEE
Q 002194 189 AKLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDIYLNAIFDNFVWVNN----STLLVC 260 (954)
Q Consensus 189 ~~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~wspD----G~~l~~ 260 (954)
..+...+|+|+ ++.++++... ...|.+++..+++. ..+...........+..++|+|| |++|+.
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~--------~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVG--------SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEE--------TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCCCceEEEECC--------CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 46888999985 6655555431 22677777775543 33321111111122678999999 677776
Q ss_pred EecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-cccccc
Q 002194 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSL 337 (954)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~ 337 (954)
.. ....|.++++ +++. ..+... ..+..+
T Consensus 91 ~~-------------------------------------------------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 91 AG-------------------------------------------------SRGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EE-------------------------------------------------TTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred ec-------------------------------------------------CCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 51 1235777787 6643 334433 778899
Q ss_pred ccCC-CCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEE-eccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 338 DPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 338 ~~Sp-DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~-l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
.|+| |++.|+..+.+ +.|.+||+..++... +.... .....+..+.|+|||+.++.
T Consensus 122 ~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~ 178 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKD-------------HALRLWNIQTDTLVAIFGGVE----------GHRDEVLSADYDLLGEKIMS 178 (366)
T ss_dssp EECSSCTTEEEEEETT-------------SCEEEEETTTTEEEEEECSTT----------SCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCCCEEEEEeCC-------------CeEEEEEeecCeEEEEecccc----------cccCceeEEEECCCCCEEEE
Confidence 9999 89988887743 389999998665433 32111 12245578999999987665
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEE----------------------------eecccccCceeeccC
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL----------------------------HKLDLRYGGISWCDD 466 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l----------------------------~~~~~~~~~~~~spD 466 (954)
. +..+.|.+|++ ..++. ..+ ..+...+..++|+
T Consensus 179 ~-------------~~dg~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 179 C-------------GMDHSLKLWRI---NSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp E-------------ETTSCEEEEES---CSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred e-------------cCCCCEEEEEC---CCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 5 33457888886 32211 111 1145566778888
Q ss_pred CceEEEEEeccccceEEEEEcCCCCC--------C--CcEEEecCCCCCccCCCCCCCeeeccC--CcEEEEEEeeccCC
Q 002194 467 SLALVYESWYKTRRTRTWVISPGSKD--------V--APRILFDRSSEDVYSDPGSPMMRRTST--GTYVIAKIKKENDE 534 (954)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~d~~~~~--------~--~~~~l~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~~ 534 (954)
++.|+..+.++ ..++|.+...... . ........+...+.. +.|+|| |++|+....
T Consensus 241 ~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~~~l~~~~~----- 307 (366)
T 3k26_A 241 GDLILSKSCEN--AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY------MRFSMDFWQKMLALGNQ----- 307 (366)
T ss_dssp TTEEEEECSSS--EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC------CCCEECTTSSEEEEECT-----
T ss_pred CCEEEEEecCC--EEEEEeCCCccccccccccCCcchheeccccccCCcEEE------EEEcCCCCCcEEEEEec-----
Confidence 66666665433 2555555432210 0 111222222222333 778999 998887751
Q ss_pred CcEEEEecCCCCCCCCCCeEEEEECCCCCeE-----EEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCc
Q 002194 535 GTYILLNGNGATPEGNIPFLDLFDINTGSKE-----RIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENT 609 (954)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~ 609 (954)
...|++||+.+++.. .+...... ..+. ..+|+||++.++.... ..
T Consensus 308 ----------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~---~~v~-------~~~~s~~~~~l~s~~~----dg 357 (366)
T 3k26_A 308 ----------------VGKLYVWDLEVEDPHKAKCTTLTHHKCG---AAIR-------QTSFSRDSSILIAVCD----DA 357 (366)
T ss_dssp ----------------TSCEEEEECCSSSGGGCEEEEECCTTCC---SCEE-------EEEECTTSSEEEEEET----TS
T ss_pred ----------------CCcEEEEECCCCCCccccceEEcccccC---CceE-------EEEeCCCCCeEEEEeC----CC
Confidence 224999999887532 22211000 0111 2578999987775443 24
Q ss_pred eEEEEEC
Q 002194 610 QYYIQSW 616 (954)
Q Consensus 610 ~l~~~~~ 616 (954)
.+++|++
T Consensus 358 ~i~iwd~ 364 (366)
T 3k26_A 358 SIWRWDR 364 (366)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 6888875
No 344
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.29 E-value=1e-10 Score=127.88 Aligned_cols=103 Identities=12% Similarity=0.115 Sum_probs=67.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCC-CC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~-~~ 188 (954)
.+..++|||||++||....+ +.|.+|++.... ...+.+..+. +.
T Consensus 13 ~v~~~~~~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~--~~~~~~~~~~~~~ 57 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSD---------------------------------QHIKVFKLDKDT--SNWELSDSWRAHD 57 (351)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEEECSSS--CCEEEEEEEECCS
T ss_pred ceeEEEEcCCCCEEEEeeCC---------------------------------CeEEEEECCCCC--CcceecceeccCC
Confidence 46688999999999988875 579999996421 1112222121 23
Q ss_pred CcccceeecC--CCCeEEEEEeeccccCCCCceEEEEEECCCCc----------eeecccCCCccccccccceeEecC--
Q 002194 189 AKLNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----------ARPLFQSPDIYLNAIFDNFVWVNN-- 254 (954)
Q Consensus 189 ~~~~~~~wSP--DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~----------~~~lt~~~~~~~~~~~~~~~wspD-- 254 (954)
..+..+.|+| ||+.|+... . ...|.++|+++++ ...+..... .+..+.|+|+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~-------~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 123 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASAS-------Y--DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG-----SLYSVKFAPAHL 123 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEE-------T--TSCEEEEEECTTSCTTSSCSEEEEEEECCCSS-----CEEEEEECCGGG
T ss_pred CcEEEEEEcCCCCCCEEEEEc-------C--CCeEEEEecCCCcccccccCcceeeeecccCC-----ceeEEEEcCCCC
Confidence 4788999999 698888765 2 3456666666553 122222222 2678999999
Q ss_pred CeEEEEE
Q 002194 255 STLLVCT 261 (954)
Q Consensus 255 G~~l~~~ 261 (954)
++.|+..
T Consensus 124 ~~~l~~~ 130 (351)
T 3f3f_A 124 GLKLACL 130 (351)
T ss_dssp CSEEEEE
T ss_pred CcEEEEe
Confidence 9988876
No 345
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.29 E-value=1.3e-09 Score=123.29 Aligned_cols=282 Identities=12% Similarity=0.116 Sum_probs=170.3
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
.+.+-+.||+++ .||..- ...|+++|+.+|+..++...... ...+..++|+|||++|+...
T Consensus 106 ~y~~~l~wS~~n-~lAvgl----------d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs------ 166 (420)
T 4gga_A 106 YYLNLVDWSSGN-VLAVAL----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGT------ 166 (420)
T ss_dssp TTCBCEEECTTS-EEEEEE----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEE------
T ss_pred ccceeEEECCCC-EEEEEe----------CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEE------
Confidence 356778999865 666543 45899999999988776543321 11277899999999998761
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCC-ccccccccCCCCcE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKY 345 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~-~~~~~~~~SpDGk~ 345 (954)
....|.++++ +++.. .+... ..+. ++++|++.
T Consensus 167 -------------------------------------------~Dg~v~iWd~~~~~~~~~~~~h~~~v~--~~s~~~~~ 201 (420)
T 4gga_A 167 -------------------------------------------SSAEVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYI 201 (420)
T ss_dssp -------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEE--EEEEETTE
T ss_pred -------------------------------------------CCCeEEEEEcCCCcEEEEEeCCCCceE--EEeeCCCE
Confidence 1234667787 66533 33333 3343 45567888
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~ 423 (954)
|+..+.+ ..+.+|+..... ...+..+. ..+..+.|+|+|+.++..
T Consensus 202 l~sgs~d-------------~~i~~~d~~~~~~~~~~~~~h~-------------~~~~~~~~~~~g~~l~s~------- 248 (420)
T 4gga_A 202 LSSGSRS-------------GHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRHLASG------- 248 (420)
T ss_dssp EEEEETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE-------
T ss_pred EEEEeCC-------------CceeEeeecccceeeEEecccc-------------cceeeeeecCCCCeeeee-------
Confidence 7776633 378889877432 23333221 334568899999976655
Q ss_pred CccccccCCCeEEEEecCCCCCC----CceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002194 424 DAKVEVTPRDIIYTQQAEPVQGE----GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (954)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~----~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 499 (954)
...+.+.+++. ..+. ...........+..++|+|++..+++...... ...|.++|+.++ ......
T Consensus 249 ------~~D~~v~i~~~--~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~-D~~I~iwd~~t~--~~~~~~ 317 (420)
T 4gga_A 249 ------GNDNLVNVWPS--APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS-DRHIRIWNVCSG--ACLSAV 317 (420)
T ss_dssp ------ETTSCEEEEES--SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT-TCEEEEEETTTT--EEEEEE
T ss_pred ------eccccceEEee--ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC-CCEEEEEeCCcc--ccceee
Confidence 33557788885 2221 12333455666788999999887776543211 134666677665 222222
Q ss_pred cCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCccccccee
Q 002194 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (954)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 579 (954)
.... .+.. +.|+|+++.++..... ....|++||+.+++.......... .+
T Consensus 318 ~~~~-~v~~------~~~~~~~~~lv~~sg~-------------------~d~~I~iwd~~~~~~v~~l~gH~~----~V 367 (420)
T 4gga_A 318 DAHS-QVCS------ILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGHTS----RV 367 (420)
T ss_dssp ECSS-CEEE------EEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCCSS----CE
T ss_pred cccc-ceee------eeecCCCCeEEEEEec-------------------CCCEEEEEECCCCcEEEEEcCCCC----CE
Confidence 2221 1222 6789999988876511 123499999998876544332211 12
Q ss_pred EEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002194 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (954)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g 619 (954)
.. .+|||||+.|+.... -..+.+|++.+.
T Consensus 368 ~~-------l~~spdg~~l~S~s~----D~tvriWdv~~~ 396 (420)
T 4gga_A 368 LS-------LTMSPDGATVASAAA----DETLRLWRCFEL 396 (420)
T ss_dssp EE-------EEECTTSSCEEEEET----TTEEEEECCSCS
T ss_pred EE-------EEEcCCCCEEEEEec----CCeEEEEECCCC
Confidence 22 469999987664322 245888887543
No 346
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.27 E-value=9.8e-10 Score=121.58 Aligned_cols=135 Identities=9% Similarity=-0.040 Sum_probs=78.4
Q ss_pred cccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCce
Q 002194 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (954)
Q Consensus 335 ~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~ 414 (954)
..+.+++|+..++|.+.. +.++++|+.+...+.+...+..............+...+.++|||++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~-------------~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 216 TQPAQANKSGRIVWPVYS-------------GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred ecceeEecCCEEEEEcCC-------------ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 346788888888887732 2788889876543333222111000000000112333478899999877
Q ss_pred EEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
........+ ......+.|+++|+ .+.+. +.+ .......+++|||||++++|..+... ..|+++|+.++
T Consensus 283 V~~~~~~~~---~~~~~~~~V~VID~---~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~--~~V~ViD~~t~ 351 (373)
T 2mad_H 283 LLTSEQSAW---KLHAAAKEVTSVTG---LVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSAGT--EVLHIYDAGAG 351 (373)
T ss_pred EEeccCCcc---cccCCCCeEEEEEC---CCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEcCCC--CeEEEEECCCC
Confidence 663321100 00012458999996 44444 444 33445788999999997777776433 57999999885
No 347
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.26 E-value=3.7e-10 Score=123.33 Aligned_cols=207 Identities=12% Similarity=0.086 Sum_probs=118.5
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce--eec--ccCCCccccccccceeEec--CCeEEEEEe
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPL--FQSPDIYLNAIFDNFVWVN--NSTLLVCTI 262 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~--~~l--t~~~~~~~~~~~~~~~wsp--DG~~l~~~~ 262 (954)
..+....|+|||+.|+... . ...|.+++++++.. +.+ ...... .+..++|+| |++.|+...
T Consensus 12 ~~v~~~~~~~~~~~l~~~~-------~--dg~i~iw~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCS-------S--DQHIKVFKLDKDTSNWELSDSWRAHDS----SIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp SCEEEEEECSSSSEEEEEE-------T--TSEEEEEEECSSSCCEEEEEEEECCSS----CEEEEEECCGGGCSEEEEEE
T ss_pred cceeEEEEcCCCCEEEEee-------C--CCeEEEEECCCCCCcceecceeccCCC----cEEEEEEcCCCCCCEEEEEc
Confidence 4688999999999988865 2 34566666655421 111 111222 277899999 688888761
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc----------eeEcCCC
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----------VKEIGPP 331 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~----------~~~l~~~ 331 (954)
....|.++++ ++. ...+...
T Consensus 79 -------------------------------------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T 3f3f_A 79 -------------------------------------------------YDKTVKLWEEDPDQEECSGRRWNKLCTLNDS 109 (351)
T ss_dssp -------------------------------------------------TTSCEEEEEECTTSCTTSSCSEEEEEEECCC
T ss_pred -------------------------------------------------CCCeEEEEecCCCcccccccCcceeeeeccc
Confidence 1123556666 432 3333333
Q ss_pred -ccccccccCCC--CcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeec
Q 002194 332 -AVYTSLDPSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (954)
Q Consensus 332 -~~~~~~~~SpD--Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~ws 407 (954)
..+..++|+|| |+.|+..+.+ +.+.+||+..++. ..+...................+..+.|+
T Consensus 110 ~~~v~~~~~~~~~~~~~l~~~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
T 3f3f_A 110 KGSLYSVKFAPAHLGLKLACLGND-------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC 176 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETT-------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred CCceeEEEEcCCCCCcEEEEecCC-------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEec
Confidence 67889999999 9999988743 3899999875431 11110000000011111223455679999
Q ss_pred cC---CCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE---EeecccccCceeeccCC----ceEEEEEecc
Q 002194 408 SD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI---LHKLDLRYGGISWCDDS----LALVYESWYK 477 (954)
Q Consensus 408 pD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~---l~~~~~~~~~~~~spDg----~~l~~~~~~~ 477 (954)
|+ ++.++.. ...+.+..+.. ..+.... +..+...+..++|+|+| +.|+..+.++
T Consensus 177 p~~~~~~~l~~~-------------~~~~~~~~~~~---~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 177 PSRFSPEKLAVS-------------ALEQAIIYQRG---KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSSCCEEEEE-------------ETTEEEEEEEC---TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred cCCCCCcEEEEe-------------cCCCcEEEEcc---CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 98 6654444 22334444442 3344322 23455667889999998 5566655443
Q ss_pred ccceEEEEEcC
Q 002194 478 TRRTRTWVISP 488 (954)
Q Consensus 478 ~~~~~l~~~d~ 488 (954)
..++|.+..
T Consensus 241 --~i~iwd~~~ 249 (351)
T 3f3f_A 241 --RIRIFKITE 249 (351)
T ss_dssp --CEEEEEEEE
T ss_pred --eEEEEeCCC
Confidence 266776654
No 348
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.26 E-value=8.6e-11 Score=124.70 Aligned_cols=214 Identities=13% Similarity=0.048 Sum_probs=127.9
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++.... +.+ . ..|.||++||.+.... .| . .....| +.+|.|++ .|.+|+
T Consensus 11 ~~g~~l~y~~~-~~G----~--~~p~vvllHG~~~~~~-----------~w---~-~~~~~L-~~~~rvia---~DlrGh 64 (276)
T 2wj6_A 11 VFDNKLSYIDN-QRD----T--DGPAILLLPGWCHDHR-----------VY---K-YLIQEL-DADFRVIV---PNWRGH 64 (276)
T ss_dssp ETTEEEEEEEC-CCC----C--SSCEEEEECCTTCCGG-----------GG---H-HHHHHH-TTTSCEEE---ECCTTC
T ss_pred eCCeEEEEEEe-cCC----C--CCCeEEEECCCCCcHH-----------HH---H-HHHHHH-hcCCEEEE---eCCCCC
Confidence 47887765543 212 1 1378999999642111 11 1 233334 46799999 677788
Q ss_pred CCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCcccEEEEeccCCCCCCCC---
Q 002194 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTLTP--- 800 (954)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~~~--- 800 (954)
|.+..+. .......+|+.+.++.| +-+++.++||||||.+++.++.++ |++++++|++++........
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~ 138 (276)
T 2wj6_A 65 GLSPSEVPDFGYQEQVKDALEILDQL------GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK 138 (276)
T ss_dssp SSSCCCCCCCCHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH
Confidence 8886432 23566778888877776 235899999999999999999999 99999999987542110000
Q ss_pred --------CCCcc------------c-cch---------------hhhcH-----HHHHh-cCcccccCCCCCCEEEEEe
Q 002194 801 --------FGFQN------------E-DRT---------------LWEAT-----STYVE-MSPFMSANKLKKPILLVHG 838 (954)
Q Consensus 801 --------~~~~~------------~-~~~---------------~~~~~-----~~~~~-~sp~~~~~~~~~P~Lii~G 838 (954)
..+.. . ... .|... ..+.. .++...+.++++|+|+++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~ 218 (276)
T 2wj6_A 139 SLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHI 218 (276)
T ss_dssp HHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEE
T ss_pred HhhhccCcchHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEE
Confidence 00000 0 000 00000 00000 0122345678899999987
Q ss_pred CCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
..|...+.......++.+. -...+++++|++||... .+..+.+.+.|.+||.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~----~p~a~~~~i~~~gH~~~-~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 219 FSQPTEPEYEKINSDFAEQ----HPWFSYAKLGGPTHFPA-IDVPDRAAVHIREFATAI 272 (276)
T ss_dssp ECCSCSHHHHHHHHHHHHH----CTTEEEEECCCSSSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred ecCccchhHHHHHHHHHhh----CCCeEEEEeCCCCCccc-ccCHHHHHHHHHHHHhhc
Confidence 5443322001222333322 23479999999999863 567788899999999764
No 349
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.26 E-value=8.1e-10 Score=122.06 Aligned_cols=131 Identities=14% Similarity=0.020 Sum_probs=71.6
Q ss_pred ccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 336 ~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
...++|||+.+++.+.. +.++++|+.+...+.+...+..............+.+.++|+|||++++.
T Consensus 204 ~~~~~~~g~~~~~~~~~-------------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSYY-------------GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp CSCCEECSSEEEEEBTT-------------SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred EEEecccCCEEEEEeCC-------------CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 44568899888887632 37889998754433221111000000000001134455899999987665
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
... .++... ...+....|+++|+ .+++. ..+..+. ...++|||||++|+.+ +. ..|.++|+.++
T Consensus 271 ~~~-~~~~~~-~~~~~~~~v~viD~---~t~~~v~~i~~~~--p~~ia~spdg~~l~v~-n~----~~v~v~D~~t~ 335 (361)
T 2oiz_A 271 FMH-PDGKEG-THKFPAAEIWVMDT---KTKQRVARIPGRD--ALSMTIDQQRNLMLTL-DG----GNVNVYDISQP 335 (361)
T ss_dssp EEE-SSCCTT-CTTCCCSEEEEEET---TTTEEEEEEECTT--CCEEEEETTTTEEEEE-CS----SCEEEEECSSS
T ss_pred EEc-cCCCcc-cccCCCceEEEEEC---CCCcEEEEEecCC--eeEEEECCCCCEEEEe-CC----CeEEEEECCCC
Confidence 422 111100 00122458999996 44433 3333333 8889999999966644 43 34777788874
No 350
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.24 E-value=8.9e-09 Score=113.84 Aligned_cols=283 Identities=10% Similarity=0.003 Sum_probs=146.6
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccC-CCCceEEEEEECCCCceeecccCC-Ccc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDS-SSSKLRVWVADVDTGKARPLFQSP-DIY 241 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~-~~~~~~l~~~d~~~g~~~~lt~~~-~~~ 241 (954)
.|.++|..+ ++ .+..++.+... ++.+||||++|+++....+... +.....|.++|+.+.+...-...+ ...
T Consensus 48 ~v~v~D~~t----~~--~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGS----GS--ILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCC----Ce--EEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 567877743 22 22234444434 8999999999998763211101 112456889999876654332222 000
Q ss_pred c--cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEE
Q 002194 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (954)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~ 319 (954)
. ......+.|||||++|+++... ....|+++
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~-----------------------------------------------~~~~v~vi 153 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFA-----------------------------------------------AGPAVGLV 153 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecC-----------------------------------------------CCCeEEEE
Confidence 0 0013478999999999987100 01346666
Q ss_pred EeCCce-eE-cCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCC-cccCCccccc
Q 002194 320 SLDGTV-KE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPL-AEDIPIAFNS 396 (954)
Q Consensus 320 ~~~G~~-~~-l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~-~~~~p~~~~~ 396 (954)
|.+++. .. +..++. +.+.|+|+..++.... ++.+.+++..++....+...+. ....|.
T Consensus 154 D~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~------------dg~~~~vd~~g~~~~~~~~~~~~~~~~p~---- 214 (373)
T 2mad_H 154 VQGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCA------------QGGLAKTDHAGGAAGAGLVGAMLTAAQNL---- 214 (373)
T ss_pred ECCCCEEeEEcCCCce---EEEEeCCCceEEEEcC------------CCCEEEEECCCcEEEEEeccccccCCcce----
Confidence 622332 22 222221 3455666554443211 1245556662222211111000 000110
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec----------ccccC---ceee
Q 002194 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------DLRYG---GISW 463 (954)
Q Consensus 397 ~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~----------~~~~~---~~~~ 463 (954)
...+.+++|+..++|. ...+.++++++ .++..+.+... .+... .+++
T Consensus 215 ----~~~~~~~~~~~~~~~~-------------~~~~~v~vid~---~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 215 ----LTQPAQANKSGRIVWP-------------VYSGKILQADI---SAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred ----eecceeEecCCEEEEE-------------cCCceEEEEec---cCCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 1235678888776665 22347888885 33333222211 11122 2678
Q ss_pred ccCCceEEEEEeccc------cceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcE
Q 002194 464 CDDSLALVYESWYKT------RRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTY 537 (954)
Q Consensus 464 spDg~~l~~~~~~~~------~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~ 537 (954)
+|||++|+....... ....|+++|+++.. ....+.-.. ...+ +.|||||++++|....
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~-vv~~i~~g~--~p~~------i~~s~Dg~~~l~v~~~------- 338 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ-TSSQISLGH--DVDA------ISVAQDGGPDLYALSA------- 338 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE-EEEEEECCC--CcCe------EEECCCCCeEEEEEcC-------
Confidence 999998877653211 12579999998852 112221111 1122 8899999977776521
Q ss_pred EEEecCCCCCCCCCCeEEEEECCCCCeEEE
Q 002194 538 ILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (954)
Q Consensus 538 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 567 (954)
....|.++|+++++....
T Consensus 339 ------------~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 339 ------------GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ------------CCCeEEEEECCCCCEEee
Confidence 123599999999887655
No 351
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.23 E-value=3.5e-10 Score=122.65 Aligned_cols=242 Identities=13% Similarity=0.099 Sum_probs=133.9
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCcee---ecccCCCccccccccceeEec--CCeEEEEEec
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVN--NSTLLVCTIP 263 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~~~~wsp--DG~~l~~~~~ 263 (954)
..+..++|+|||++|+..+ . ...|.++|+.+++.. .+..+.. .+..++|+| +|++|+...
T Consensus 14 ~~V~~v~~s~~g~~lasgs-------~--D~~v~lwd~~~~~~~~~~~l~gH~~-----~V~~v~~~~~~~~~~l~s~s- 78 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCS-------S--DRSVKIFDVRNGGQILIADLRGHEG-----PVWQVAWAHPMYGNILASCS- 78 (316)
T ss_dssp CCEEEEEECGGGCEEEEEE-------T--TTEEEEEEEETTEEEEEEEEECCSS-----CEEEEEECCGGGSSCEEEEE-
T ss_pred CeEEEeeEcCCCCEEEEEe-------C--CCeEEEEEecCCCcEEEEEEcCCCc-----cEEEEEeCCCCCCCEEEEEE-
Confidence 3688899999999998865 2 345566666665432 2222222 277899986 488887651
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc---eeEcCCC-ccccccc
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLD 338 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~---~~~l~~~-~~~~~~~ 338 (954)
. ...|.++++ +|. ...+... ..+..++
T Consensus 79 --------------------~----------------------------D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~ 110 (316)
T 3bg1_A 79 --------------------Y----------------------------DRKVIIWREENGTWEKSHEHAGHDSSVNSVC 110 (316)
T ss_dssp --------------------T----------------------------TSCEEEECCSSSCCCEEEEECCCSSCCCEEE
T ss_pred --------------------C----------------------------CCEEEEEECCCCcceEEEEccCCCCceEEEE
Confidence 1 123556666 553 2233333 6788999
Q ss_pred cCCC--CcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 339 PSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 339 ~SpD--Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
|+|| |+.|+..+.+ +.+.+|++.++. ........ +....+..++|+|++..--+
T Consensus 111 ~~p~~~g~~lasgs~D-------------~~i~lwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 111 WAPHDYGLILACGSSD-------------GAISLLTYTGEGQWEVKKINN----------AHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp ECCTTTCSCEEEECSS-------------SCEEEEEECSSSCEEECCBTT----------SSSSCBCCCEECCCCCC---
T ss_pred ECCCCCCcEEEEEcCC-------------CCEEEEecCCCCCcceeeeec----------cccCCcceEEEccccCCccc
Confidence 9998 7788877643 389999988542 22111111 12234567889998421000
Q ss_pred EEEeccC-----CCccccccCCCeEEEEecCCCCCCCc---eEEeecccccCceeeccCC----ceEEEEEeccccceEE
Q 002194 416 WAETQDG-----GDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDS----LALVYESWYKTRRTRT 483 (954)
Q Consensus 416 ~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~~~~~~~~~~spDg----~~l~~~~~~~~~~~~l 483 (954)
. ....+ +..-+..+..+.|.+|++ ..++.. ..+..+...+..++|+|++ +.|+..+.++. .+|
T Consensus 168 ~-~~~~~~~~~~~~~l~sgs~D~~v~lWd~--~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~--v~i 242 (316)
T 3bg1_A 168 I-DHPSGQKPNYIKRFASGGCDNLIKLWKE--EEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR--VFI 242 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEE--CTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE--EEE
T ss_pred c-ccccccCccccceEEEecCCCeEEEEEe--CCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe--EEE
Confidence 0 00000 000011133456777875 122222 2234455667889999997 56666654432 566
Q ss_pred EEEcCCC-CCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 484 WVISPGS-KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 484 ~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
|.++... +......+. .....+.. ++|+|||++|+...
T Consensus 243 w~~~~~~~~~~~~~~~~-~~~~~v~~------v~~sp~g~~las~~ 281 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLH-KFNDVVWH------VSWSITANILAVSG 281 (316)
T ss_dssp EECSSTTCCCCBCCEEE-ECSSCEEE------EEECTTTCCEEEEE
T ss_pred EEccCccccchhhhhhh-cCCCcEEE------EEEcCCCCEEEEEc
Confidence 6554311 111112222 22233333 88999999998776
No 352
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.23 E-value=1.9e-10 Score=127.89 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=80.0
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC---------CcEEEE
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR---------GFAILG 717 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~---------G~~V~~ 717 (954)
.+|..|+...+.+.+ +..|.||++||.+.... .| ...+..|++. ||.|++
T Consensus 75 i~g~~i~~~~~~~~~------~~~~plll~HG~~~s~~-----------~~----~~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 75 IDGATIHFLHVRSPE------PDATPMVITHGWPGTPV-----------EF----LDIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp ETTEEEEEEEECCSS------TTCEEEEEECCTTCCGG-----------GG----HHHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred ECCeEEEEEEccCCC------CCCCeEEEECCCCCCHH-----------HH----HHHHHHHhCcccccCCCCCCeEEEE
Confidence 489999987776542 12577999999752211 11 1234455554 999999
Q ss_pred cCCCCCCCCCCcccchh---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 718 GPTTPIIGEGDEEANDR---FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 718 ~~~~~~~G~G~~~~~~~---~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
.+..|+|.+..... ......+|+.+.++.+ +.+++.++||||||.+++.++.++|++++++|++++.
T Consensus 134 ---~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~l------g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 134 ---PSLPGFGLSGPLKSAGWELGRIAMAWSKLMASL------GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp ---ECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHT------TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred ---EcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 66678887755432 2334444444443332 3358999999999999999999999999999999864
No 353
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.22 E-value=6.7e-10 Score=121.20 Aligned_cols=239 Identities=15% Similarity=0.171 Sum_probs=135.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCC---CC-ceeeeecC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK---LG-QEIEIQGF 185 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~---~~-~~~~lt~~ 185 (954)
.+..++|||||+.||..+.+ ..|.+|++..... .. ....+.+
T Consensus 60 ~v~~v~~sp~~~~las~s~D---------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~- 105 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFD---------------------------------STVSIWAKEESADRTFEMDLLAIIEG- 105 (330)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEEC-------CCCEEEEEEC--
T ss_pred CEEEEEECCCCCEEEEEeCC---------------------------------CcEEEEEcccCcCccccceeEEEEcC-
Confidence 46689999999999988876 5788998842110 00 1122322
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECC-CCc---eeecccCCCccccccccceeEecCCeEEEEE
Q 002194 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD-TGK---ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (954)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~-~g~---~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~ 261 (954)
+...+..++|||||++|+.... ...|.++|++ ++. .......... .+..+.|+|||+.|+..
T Consensus 106 -h~~~V~~v~~sp~g~~las~s~---------D~~v~iwd~~~~~~~~~~~~~~~~h~~----~v~~v~~~p~~~~l~s~ 171 (330)
T 2hes_X 106 -HENEVKGVAWSNDGYYLATCSR---------DKSVWIWETDESGEEYECISVLQEHSQ----DVKHVIWHPSEALLASS 171 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEET---------TSCEEEEECCTTCCCCEEEEEECCCSS----CEEEEEECSSSSEEEEE
T ss_pred -CCCcEEEEEECCCCCEEEEEeC---------CCEEEEEeccCCCCCeEEEEEeccCCC----ceEEEEECCCCCEEEEE
Confidence 2236888999999999988652 3456666763 222 1111122222 26789999999988876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC--c-eeEcCCC-ccccc
Q 002194 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG--T-VKEIGPP-AVYTS 336 (954)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G--~-~~~l~~~-~~~~~ 336 (954)
. .+ ..|.+++. ++ + ...+... ..+..
T Consensus 172 s---------------------~D----------------------------~~i~iW~~~~~~~~~~~~~~~h~~~v~~ 202 (330)
T 2hes_X 172 S---------------------YD----------------------------DTVRIWKDYDDDWECVAVLNGHEGTVWS 202 (330)
T ss_dssp E---------------------TT----------------------------SCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred c---------------------CC----------------------------CeEEEEECCCCCeeEEEEccCCCCcEEE
Confidence 1 11 22444455 44 2 2334444 67788
Q ss_pred cccCCC--CcEEEEEeecCCcccccccCCCCcceEEEeccCce------EEEeccCCCcccCCccccccccCccceeecc
Q 002194 337 LDPSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF------VRELCDLPLAEDIPIAFNSVRKGMRSINWRS 408 (954)
Q Consensus 337 ~~~SpD--Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~------~~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp 408 (954)
++|+|| +..|+..+.+ +.+.+|++.++. ...+...+. .....+..++|++
T Consensus 203 ~~~~~~~~~~~l~s~s~D-------------~~v~iw~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~v~~s~ 260 (330)
T 2hes_X 203 SDFDKTEGVFRLCSGSDD-------------STVRVWKYMGDDEDDQQEWVCEAILPD---------VHKRQVYNVAWGF 260 (330)
T ss_dssp EEECCSSSSCEEEEEETT-------------SCEEEEEEEEECTTSCEEEEEEEECCS---------CCSSCEEEEEECT
T ss_pred EEecCCCCeeEEEEEeCC-------------CeEEEEEecCCCccccceeEEeeeccc---------ccccceEEEEEcC
Confidence 999999 6677766633 389999987431 011111110 0123456789997
Q ss_pred CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEE----eeccc-ccCceeecc--CCceEEEEEeccccce
Q 002194 409 DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL----HKLDL-RYGGISWCD--DSLALVYESWYKTRRT 481 (954)
Q Consensus 409 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l----~~~~~-~~~~~~~sp--Dg~~l~~~~~~~~~~~ 481 (954)
++ .|+.. +..+.|.+|+. .+++.+.+ ..+.. .+..++|+| |++.|+..+.++. .
T Consensus 261 ~~-~l~s~-------------~~dg~v~iw~~---~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~--v 321 (330)
T 2hes_X 261 NG-LIASV-------------GADGVLAVYEE---VDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI--V 321 (330)
T ss_dssp TS-CEEEE-------------ETTSCEEEEEE---ETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE--E
T ss_pred CC-EEEEE-------------eCCCEEEEEEc---CCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCc--E
Confidence 66 33333 33457788885 33322222 12232 567789999 7888887765543 5
Q ss_pred EEEEE
Q 002194 482 RTWVI 486 (954)
Q Consensus 482 ~l~~~ 486 (954)
+||.+
T Consensus 322 ~~W~~ 326 (330)
T 2hes_X 322 NFWSL 326 (330)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 56654
No 354
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.21 E-value=3.6e-10 Score=128.64 Aligned_cols=246 Identities=10% Similarity=0.071 Sum_probs=141.0
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCC--CCCCceeeeecCC
Q 002194 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPD--GKLGQEIEIQGFP 186 (954)
Q Consensus 110 ~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--g~~~~~~~lt~~~ 186 (954)
.+..++||| ||++||..+.+ +.|.+|++... +.... ..++ +.
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~d---------------------------------g~v~vwd~~~~~~~~~~~-~~~~-~~ 109 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQ---------------------------------GVIKIWNLKEIIVGEVYS-SSLT-YD 109 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETT---------------------------------SEEEEEEHHHHHTTCCCS-CSEE-EE
T ss_pred ceEEEEECCCCCCEEEEecCC---------------------------------ceEEEeECcccccCcccc-eeee-cc
Confidence 577899999 99999998876 57999998531 11011 1121 11
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEEC-CCCceeecccCCCcc--------cccccccee--EecCC
Q 002194 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV-DTGKARPLFQSPDIY--------LNAIFDNFV--WVNNS 255 (954)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~-~~g~~~~lt~~~~~~--------~~~~~~~~~--wspDG 255 (954)
....+....|+||++.|+... .++...||-++. ..++..+........ ....+..+. |++|+
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s-------~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSS-------KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-------TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred CCCCEEEEEEeCCCCEEEEEe-------CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC
Confidence 334789999999999988765 334444444431 133332221100000 000022222 66788
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCC--C
Q 002194 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGP--P 331 (954)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~--~ 331 (954)
+.|+... ....|.++|+ +++ ...+.. .
T Consensus 183 ~~l~~~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 183 SLLVALT-------------------------------------------------NLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEE-------------------------------------------------TTSEEEEEETTTCCEEEEEECCGG
T ss_pred CEEEEEe-------------------------------------------------CCCeEEEEeCCCCeeeEEEccCCC
Confidence 8777651 2245778888 664 344443 2
Q ss_pred -ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccce----e
Q 002194 332 -AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSI----N 405 (954)
Q Consensus 332 -~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~----~ 405 (954)
..+..++|+|||++|+..+.+ +.|.+||+..++. ..+.. ... ..+..+ .
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~-~~~-----------~~v~~~~~~~~ 268 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTR-------------GIIDIWDIRFNVLIRSWSF-GDH-----------APITHVEVCQF 268 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETT-------------SCEEEEETTTTEEEEEEBC-TTC-----------EEEEEEEECTT
T ss_pred CCceEEEEECCCCCEEEEEcCC-------------CeEEEEEcCCccEEEEEec-CCC-----------CceEEEEeccc
Confidence 678899999999999988744 3899999986554 33321 111 223455 5
Q ss_pred eccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec--------------------------ccccC
Q 002194 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--------------------------DLRYG 459 (954)
Q Consensus 406 wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--------------------------~~~~~ 459 (954)
|+|||+.++.. +..+.|.+|++ .++.....+... ...+.
T Consensus 269 ~s~~~~~l~s~-------------~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~ 333 (437)
T 3gre_A 269 YGKNSVIVVGG-------------SSKTFLTIWNF--VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALS 333 (437)
T ss_dssp TCTTEEEEEEE-------------STTEEEEEEET--TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred cCCCccEEEEE-------------cCCCcEEEEEc--CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceE
Confidence 66677655444 34557889986 223223333322 22355
Q ss_pred ceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 460 GISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 460 ~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
.++|+ +++.|+..+.++ .|.++++.++
T Consensus 334 ~l~~~-~~~~l~s~~~d~----~i~~wd~~~~ 360 (437)
T 3gre_A 334 TISVS-NDKILLTDEATS----SIVMFSLNEL 360 (437)
T ss_dssp CEEEE-TTEEEEEEGGGT----EEEEEETTCG
T ss_pred EEEEC-CceEEEecCCCC----eEEEEECCCc
Confidence 66777 666666554332 4666666664
No 355
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.21 E-value=6.3e-09 Score=121.10 Aligned_cols=312 Identities=13% Similarity=0.041 Sum_probs=170.3
Q ss_pred CCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCcc
Q 002194 112 PALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKL 191 (954)
Q Consensus 112 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~ 191 (954)
..+.|||||++|.....+ ..|.++|+.. .+.....++ +.+...
T Consensus 200 ~~v~~SpDGr~lyv~~~d---------------------------------g~V~viD~~~-~t~~~v~~i---~~G~~P 242 (567)
T 1qks_A 200 HISRLSASGRYLFVIGRD---------------------------------GKVNMIDLWM-KEPTTVAEI---KIGSEA 242 (567)
T ss_dssp EEEEECTTSCEEEEEETT---------------------------------SEEEEEETTS-SSCCEEEEE---ECCSEE
T ss_pred cceEECCCCCEEEEEcCC---------------------------------CeEEEEECCC-CCCcEeEEE---ecCCCC
Confidence 367889999887665443 3688888731 111222233 234456
Q ss_pred cceeec----CCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCcccc-------ccccceeEecCCeEEEE
Q 002194 192 NFVTWS----QDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN-------AIFDNFVWVNNSTLLVC 260 (954)
Q Consensus 192 ~~~~wS----PDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~-------~~~~~~~wspDG~~l~~ 260 (954)
....+| |||++++.+... ...|.++|..+.+..+.......... ..+..+..|+++..+++
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~--------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYW--------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEE--------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred ceeEEccccCCCCCEEEEEEcc--------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 788999 799998886642 46788889888777654332211000 01234555666655554
Q ss_pred EecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc---eeEcCCCccccc
Q 002194 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPPAVYTS 336 (954)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~---~~~l~~~~~~~~ 336 (954)
.. ....+|+++|. +.+ .+.+.......+
T Consensus 315 ~~------------------------------------------------~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 315 NV------------------------------------------------KETGKILLVDYTDLNNLKTTEISAERFLHD 346 (567)
T ss_dssp EE------------------------------------------------TTTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred Ee------------------------------------------------cCCCeEEEEecCCCccceeeeeeccccccC
Confidence 41 03456888887 432 222322233456
Q ss_pred cccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCcccee-eccCCCCceE
Q 002194 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN-WRSDKPSTLY 415 (954)
Q Consensus 337 ~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~-wspDg~~i~~ 415 (954)
..|+|||++++...... ++|.++|+++++........ ...|. .+ +.+. +.||+..+++
T Consensus 347 ~~~~pdgr~~~va~~~s------------n~V~ViD~~t~kl~~~i~vg--g~~Ph------pg-~g~~~~~p~~g~v~~ 405 (567)
T 1qks_A 347 GGLDGSHRYFITAANAR------------NKLVVIDTKEGKLVAIEDTG--GQTPH------PG-RGANFVHPTFGPVWA 405 (567)
T ss_dssp EEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECS--SSSBC------CT-TCEEEEETTTEEEEE
T ss_pred ceECCCCCEEEEEeCCC------------CeEEEEECCCCcEEEEEecc--CcCCC------Cc-cceeeECCCCCcEEE
Confidence 78999999998887443 28999999977654332210 01111 11 2333 4788765543
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCC----CC-ceEEeecccccCceeeccCCceEEEEEeccc---cceEEEEEc
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQG----EG-PEILHKLDLRYGGISWCDDSLALVYESWYKT---RRTRTWVIS 487 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g----~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~---~~~~l~~~d 487 (954)
. .. -+.+.|.+++.++... -+ .+.+.........+..+|||++|+.....+. ....|.++|
T Consensus 406 t-~~----------~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 406 T-SH----------MGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp E-EB----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred e-CC----------CCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 3 11 1235788888632111 11 1222222122234678999999887642111 023577777
Q ss_pred CCCC-----CCCcEEEecC-------CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEE
Q 002194 488 PGSK-----DVAPRILFDR-------SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (954)
Q Consensus 488 ~~~~-----~~~~~~l~~~-------~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 555 (954)
.++. ......+.-. ....+. .+.|+|||+++++..... . .....|.
T Consensus 475 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~G~~~~~s~~~~-------------~---~~~~~i~ 532 (567)
T 1qks_A 475 IKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV------QGEFNKDGTEVWFSVWNG-------------K---DQESALV 532 (567)
T ss_dssp GGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE------EEEECTTSSEEEEEEECC-------------T---TSCCEEE
T ss_pred CCcccccccCCCcEEeccccccccCCCCcceE------eeeECCCCCEEEEEeecC-------------C---CCCCcEE
Confidence 6653 1111233110 011111 167899999998886321 0 0123588
Q ss_pred EEECCCCCeEEEecc
Q 002194 556 LFDINTGSKERIWES 570 (954)
Q Consensus 556 ~~d~~~g~~~~l~~~ 570 (954)
++|.+|++.......
T Consensus 533 v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 533 VVDDKTLELKHVIKD 547 (567)
T ss_dssp EEETTTTEEEEEECC
T ss_pred EEECCCceEEEEeCC
Confidence 999999887655543
No 356
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.21 E-value=1.9e-08 Score=117.02 Aligned_cols=325 Identities=9% Similarity=-0.002 Sum_probs=176.4
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECC--CCceeecccCCCc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKARPLFQSPDI 240 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~--~g~~~~lt~~~~~ 240 (954)
+.|+++|..+ ++. +..++.+.....+.+||||++++...+ ...|.++|+. +++...-......
T Consensus 177 ~~V~viD~~t----~~v--~~~i~~g~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~~~t~~~v~~i~~G~~ 241 (567)
T 1qks_A 177 GQIALIDGST----YEI--KTVLDTGYAVHISRLSASGRYLFVIGR---------DGKVNMIDLWMKEPTTVAEIKIGSE 241 (567)
T ss_dssp TEEEEEETTT----CCE--EEEEECSSCEEEEEECTTSCEEEEEET---------TSEEEEEETTSSSCCEEEEEECCSE
T ss_pred CeEEEEECCC----CeE--EEEEeCCCCccceEECCCCCEEEEEcC---------CCeEEEEECCCCCCcEeEEEecCCC
Confidence 3788988743 322 222233445668899999998776531 3479999985 5544322222221
Q ss_pred cccccccceeEe----cCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceE
Q 002194 241 YLNAIFDNFVWV----NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQL 316 (954)
Q Consensus 241 ~~~~~~~~~~ws----pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l 316 (954)
...+++| |||++++++.. ...++
T Consensus 242 -----P~~ia~s~~~~pDGk~l~v~n~------------------------------------------------~~~~v 268 (567)
T 1qks_A 242 -----ARSIETSKMEGWEDKYAIAGAY------------------------------------------------WPPQY 268 (567)
T ss_dssp -----EEEEEECCSTTCTTTEEEEEEE------------------------------------------------ETTEE
T ss_pred -----CceeEEccccCCCCCEEEEEEc------------------------------------------------cCCeE
Confidence 3478899 79999997711 12345
Q ss_pred EEEEe-CCceeE-cCCC------------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEec
Q 002194 317 VLVSL-DGTVKE-IGPP------------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELC 382 (954)
Q Consensus 317 ~~~~~-~G~~~~-l~~~------------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~ 382 (954)
.++|. +.+... +... ..+..+..|+++..+++.... .+.|+++|........++
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~------------~g~v~~vd~~~~~~~~v~ 336 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE------------TGKILLVDYTDLNNLKTT 336 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEETTCSSEEEEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC------------CCeEEEEecCCCccceee
Confidence 56666 543322 2111 123456678887766655422 348888887653222222
Q ss_pred cCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-cc-c--c
Q 002194 383 DLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DL-R--Y 458 (954)
Q Consensus 383 ~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~-~--~ 458 (954)
..+.. .....+.|+|||++++... ...+.|.++|+ ..++....... .. . .
T Consensus 337 ~i~~~-----------~~~~d~~~~pdgr~~~va~------------~~sn~V~ViD~---~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 337 EISAE-----------RFLHDGGLDGSHRYFITAA------------NARNKLVVIDT---KEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp EEECC-----------SSEEEEEECTTSCEEEEEE------------GGGTEEEEEET---TTTEEEEEEECSSSSBCCT
T ss_pred eeecc-----------ccccCceECCCCCEEEEEe------------CCCCeEEEEEC---CCCcEEEEEeccCcCCCCc
Confidence 21110 1123578999999665541 22457899996 44443332222 11 1 1
Q ss_pred Cceee-ccCCceEEEEEeccccceEEEEEcCCCCC-----CCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeecc
Q 002194 459 GGISW-CDDSLALVYESWYKTRRTRTWVISPGSKD-----VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKEN 532 (954)
Q Consensus 459 ~~~~~-spDg~~l~~~~~~~~~~~~l~~~d~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 532 (954)
.++.| .|++..+++...-.. ..|.+++.+++. .+.......... +...+..+|||++++.....
T Consensus 391 ~g~~~~~p~~g~v~~t~~~g~--~~Vsvid~~~~~~~~~~~kvv~~i~~~g~------g~~~i~~~p~~~~l~v~~~~-- 460 (567)
T 1qks_A 391 RGANFVHPTFGPVWATSHMGD--DSVALIGTDPEGHPDNAWKILDSFPALGG------GSLFIKTHPNSQYLYVDATL-- 460 (567)
T ss_dssp TCEEEEETTTEEEEEEEBSSS--SEEEEEECCTTTCTTTBTSEEEEEECSCS------CCCCEECCTTCSEEEEECTT--
T ss_pred cceeeECCCCCcEEEeCCCCC--CeEEEecCCCCCCccccCEEEEEEecCCC------CCEEEEeCCCCCeEEEecCC--
Confidence 24444 788887766654332 357788877632 112121111111 11226779999988765410
Q ss_pred CCCcEEEEecCCCCCCC-CCCeEEEEECCCC-----Ce--EEEeccCccccc---ceeEEeccCCccccccccCCEEEEE
Q 002194 533 DEGTYILLNGNGATPEG-NIPFLDLFDINTG-----SK--ERIWESDKEKYY---ETTVALMSDQTEGDLYLNQLKILTS 601 (954)
Q Consensus 533 ~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~g-----~~--~~l~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~ 601 (954)
.+.. ....|.++|+++. .. +.+.-.++...- ..+. .+.|++||++++++
T Consensus 461 -------------~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~G~~~~~s 520 (567)
T 1qks_A 461 -------------NPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV-------QGEFNKDGTEVWFS 520 (567)
T ss_dssp -------------CSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE-------EEEECTTSSEEEEE
T ss_pred -------------CCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE-------eeeECCCCCEEEEE
Confidence 0100 0235899998765 21 333211000000 0111 25799999999998
Q ss_pred EecC-CCCceEEEEECCCCceeE
Q 002194 602 KESK-TENTQYYIQSWPDKKSCQ 623 (954)
Q Consensus 602 ~~s~-~~p~~l~~~~~~~g~~~~ 623 (954)
.+.. .....|.++|..+++.+.
T Consensus 521 ~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 521 VWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp EECCTTSCCEEEEEETTTTEEEE
T ss_pred eecCCCCCCcEEEEECCCceEEE
Confidence 7754 356789999988876543
No 357
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.21 E-value=1.1e-08 Score=113.05 Aligned_cols=92 Identities=15% Similarity=0.056 Sum_probs=53.4
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeecccc-CCCCceEEEEEECCCCceeecccCCCcc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAED-SSSSKLRVWVADVDTGKARPLFQSPDIY 241 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~-~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 241 (954)
..|+++|..+ ++. +..++.+... +++|||||++|+.+....... .+.....|.++|+++++...-.......
T Consensus 31 ~~v~v~D~~t----~~~--~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 31 SRVHVYDYTN----GKF--LGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp CEEEEEETTT----CCE--EEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred CeEEEEECCC----CeE--EEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 3688988743 322 1123333344 889999999988765321000 0122456889999887664332211100
Q ss_pred c--cccccceeEecCCeEEEEE
Q 002194 242 L--NAIFDNFVWVNNSTLLVCT 261 (954)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~ 261 (954)
. ......++++|||++|+++
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~ 125 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQ 125 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEE
T ss_pred cccCCCcceEEECCCCCEEEEE
Confidence 0 0014578999999999977
No 358
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.20 E-value=1.6e-10 Score=141.23 Aligned_cols=238 Identities=12% Similarity=0.143 Sum_probs=149.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCC-CC
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~-~~ 188 (954)
.+..++|||||++|+....+ +.|.+|++.. +....+..+. +.
T Consensus 11 ~V~~l~~s~dg~~latg~~d---------------------------------g~I~vwd~~~----~~~~~~~~l~~h~ 53 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSD---------------------------------KTIKIFEVEG----ETHKLIDTLTGHE 53 (753)
T ss_dssp CEEEECCCSSSCCEEEEETT---------------------------------TEEEEEEEET----TEEEEEEEECCCS
T ss_pred eeEEEEECCCCCeEEEEECC---------------------------------CcEEEEecCC----CCCccceeccCCc
Confidence 56678999999999988765 4789999853 2222222222 23
Q ss_pred CcccceeecCC--CCeEEEEEeeccccCCCCceEEEEEECCCCceee--cccCCCccccccccceeEecC--CeEEEEEe
Q 002194 189 AKLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP--LFQSPDIYLNAIFDNFVWVNN--STLLVCTI 262 (954)
Q Consensus 189 ~~~~~~~wSPD--G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~--lt~~~~~~~~~~~~~~~wspD--G~~l~~~~ 262 (954)
..+..+.|+|+ |+.|+... . ...|.++++++++... ....... .+..+.|+|+ |+.|++..
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s-------~--Dg~I~vwd~~~~~~~~~~~~~~h~~----~V~~v~~sp~~~~~~l~sgs 120 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCS-------Y--DGKVLIWKEENGRWSQIAVHAVHSA----SVNSVQWAPHEYGPLLLVAS 120 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEE-------T--TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE
T ss_pred CceEEEEecCCCCCCEEEEEe-------C--CCeEEEEECCCCcccccccccCCCC----CeEEEEECCCCCCCEEEEEe
Confidence 47889999998 88888865 2 3456666766765222 2221222 2778999999 88888761
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC---ceeEcCCC-cccccc
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYTSL 337 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G---~~~~l~~~-~~~~~~ 337 (954)
..+.|.++++ ++ ....+... ..+..+
T Consensus 121 -------------------------------------------------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 121 -------------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (753)
T ss_dssp -------------------------------------------------TTSEEEEEECCSSSCCCCEEEECCSSCEEEE
T ss_pred -------------------------------------------------CCCcEEEEEeecCCCcceeEeecCCCceEEE
Confidence 1234667777 44 22223333 677888
Q ss_pred ccCC-------------CCcEEEEEeecCCcccccccCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCcc
Q 002194 338 DPSP-------------DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMR 402 (954)
Q Consensus 338 ~~Sp-------------DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~g~~ 402 (954)
.|+| ||+.|+..+.+ +.|.+||+.++. ...+.... +....+.
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~d-------------g~I~iwd~~~~~~~~~~~~~~~----------~h~~~V~ 208 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQTYVLESTLE----------GHSDWVR 208 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETT-------------SCEEEEEEETTTTEEEEEEEEC----------CCSSCEE
T ss_pred EecCcccccccccccCCCCCEEEEEECC-------------CeEEEEeccCCcccceeeeeec----------CCCCcEE
Confidence 9999 68888888743 389999998542 11111111 1224457
Q ss_pred ceeeccC---CCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC---ceEE---eecccccCceeeccCCceEEEE
Q 002194 403 SINWRSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEIL---HKLDLRYGGISWCDDSLALVYE 473 (954)
Q Consensus 403 ~~~wspD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~~~l---~~~~~~~~~~~~spDg~~l~~~ 473 (954)
.++|+|| |+.++.. +..+.|.+|++ ..++ ...+ ......+..++|+|||+.|+..
T Consensus 209 ~l~~sp~~~~~~~l~s~-------------s~Dg~I~iwd~---~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASV-------------SQDRTCIIWTQ---DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEECCCCSSSEEEEEE-------------ESSSCEEEEEE---SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred EEEeccCCCCCCEEEEE-------------ecCCEEEEecC---CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 8999999 6655544 33557888886 3221 1111 2345567789999999998887
Q ss_pred EeccccceEEEEEc
Q 002194 474 SWYKTRRTRTWVIS 487 (954)
Q Consensus 474 ~~~~~~~~~l~~~d 487 (954)
+.++. .++|.++
T Consensus 273 s~Dg~--I~vwd~~ 284 (753)
T 3jro_A 273 GGDNK--VTLWKEN 284 (753)
T ss_dssp CSSSC--EECCBCC
T ss_pred cCCCE--EEEEecC
Confidence 65432 4455443
No 359
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.20 E-value=8.1e-10 Score=125.47 Aligned_cols=243 Identities=11% Similarity=0.220 Sum_probs=144.2
Q ss_pred CCCCCceecCC-CCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCC-------CCCCcee
Q 002194 109 PPLPALSFSPQ-RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPD-------GKLGQEI 180 (954)
Q Consensus 109 ~~~~~~~~SPD-G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-------g~~~~~~ 180 (954)
..+..++|+|+ ++.||....+ +.|.+|++... +......
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~d---------------------------------g~V~vwd~~~~~~~~~~~~~~~~~~ 175 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPS---------------------------------SDVLVFDYTKHPSKPEPSGECQPDL 175 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSS---------------------------------SCEEEEEGGGSCSSCCTTCCCCCSE
T ss_pred CcEEEEEECCCCCcEEEEECCC---------------------------------CcEEEEECCCcccccCccccCCCcE
Confidence 36788999998 4555555443 47899998641 1112333
Q ss_pred eeecCCCCCcccceeecCCCC-eEEEEEeeccccCCCCceEEEEEECCCCce--------eecccCCCccccccccceeE
Q 002194 181 EIQGFPDGAKLNFVTWSQDGK-HLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFVW 251 (954)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~-~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~--------~~lt~~~~~~~~~~~~~~~w 251 (954)
.+.. +...+....|+|+++ .|+... ....|.++++..+.. ..+.... ..+..++|
T Consensus 176 ~~~~--h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~ 239 (430)
T 2xyi_A 176 RLRG--HQKEGYGLSWNPNLNGYLLSAS---------DDHTICLWDINATPKEHRVIDAKNIFTGHT-----AVVEDVAW 239 (430)
T ss_dssp EEEC--CSSCCCCEEECTTSTTEEEEEC---------TTSCEEEEETTSCCBGGGEEECSEEECCCS-----SCEEEEEE
T ss_pred EecC--CCCCeEEEEeCCCCCCeEEEEe---------CCCeEEEEeCCCCCCCCceeccceeecCCC-----CCEeeeEE
Confidence 3433 334688999999999 555532 245677777765321 1121112 12678999
Q ss_pred ecC-CeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC----ce
Q 002194 252 VNN-STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG----TV 325 (954)
Q Consensus 252 spD-G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G----~~ 325 (954)
+|+ +..|+... ....|.++|+ ++ ..
T Consensus 240 ~p~~~~~l~s~~-------------------------------------------------~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 240 HLLHESLFGSVA-------------------------------------------------DDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp CSSCTTEEEEEE-------------------------------------------------TTSEEEEEETTCSCSSSCS
T ss_pred eCCCCCEEEEEe-------------------------------------------------CCCeEEEEECCCCCCCcce
Confidence 994 55555441 2345777787 44 22
Q ss_pred eEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC-ce-EEEeccCCCcccCCccccccccCcc
Q 002194 326 KEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IF-VRELCDLPLAEDIPIAFNSVRKGMR 402 (954)
Q Consensus 326 ~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g-~~-~~~l~~~~~~~~~p~~~~~~~~g~~ 402 (954)
..+... ..+..++|+|+|++++++... .+.|.+||+.. +. ...+..+ ...+.
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~------------dg~v~vwd~~~~~~~~~~~~~h-------------~~~v~ 325 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSA------------DKTVALWDLRNLKLKLHSFESH-------------KDEIF 325 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEET------------TSEEEEEETTCTTSCSEEEECC-------------SSCEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeC------------CCeEEEEeCCCCCCCeEEeecC-------------CCCEE
Confidence 333333 678899999999976555433 23899999985 22 2333222 23457
Q ss_pred ceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCC---------CCceEE---eecccccCceeeccCCceE
Q 002194 403 SINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG---------EGPEIL---HKLDLRYGGISWCDDSLAL 470 (954)
Q Consensus 403 ~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g---------~~~~~l---~~~~~~~~~~~~spDg~~l 470 (954)
.+.|+|+|+.+++.. +..+.|.+|++..... +....+ ..+...+..++|+|+++++
T Consensus 326 ~i~~sp~~~~~l~s~------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 393 (430)
T 2xyi_A 326 QVQWSPHNETILASS------------GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWI 393 (430)
T ss_dssp EEEECSSCTTEEEEE------------ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTE
T ss_pred EEEECCCCCCEEEEE------------eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCE
Confidence 899999998765541 2245688888621110 001222 2345567889999999965
Q ss_pred EEEEeccccceEEEEEc
Q 002194 471 VYESWYKTRRTRTWVIS 487 (954)
Q Consensus 471 ~~~~~~~~~~~~l~~~d 487 (954)
+++...++ ..+||.++
T Consensus 394 l~s~s~dg-~i~iw~~~ 409 (430)
T 2xyi_A 394 ICSVSEDN-IMQVWQMA 409 (430)
T ss_dssp EEEEETTS-EEEEEEEC
T ss_pred EEEEECCC-CEEEeEcc
Confidence 55555443 35677664
No 360
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.18 E-value=4.9e-10 Score=121.34 Aligned_cols=179 Identities=13% Similarity=0.019 Sum_probs=111.8
Q ss_pred HHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC---
Q 002194 704 SVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA--- 780 (954)
Q Consensus 704 ~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~--- 780 (954)
+...| +.||.|+. .+..|+|.+...........+|+.+.++.+.. ..++.|+||||||.++..++.+.
T Consensus 102 ~~~~L-~~~~~v~~---~d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~lvGhS~Gg~vA~~~A~~~~~~ 172 (319)
T 3lcr_A 102 LAEEL-DAGRRVSA---LVPPGFHGGQALPATLTVLVRSLADVVQAEVA-----DGEFALAGHSSGGVVAYEVARELEAR 172 (319)
T ss_dssp HHHHH-CTTSEEEE---EECTTSSTTCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHT
T ss_pred HHHHh-CCCceEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHhc
Confidence 34344 78999999 56667776655444456666666666655432 25899999999999999999887
Q ss_pred CCcccEEEEeccCCCCCCC-CC-CCccc-cchhhhc----------------HHHHHhcCcccccCCCCCCEEEEEeCCC
Q 002194 781 PHLFCCGIARSGAYNRTLT-PF-GFQNE-DRTLWEA----------------TSTYVEMSPFMSANKLKKPILLVHGEED 841 (954)
Q Consensus 781 p~~~~a~v~~~~~~~~~~~-~~-~~~~~-~~~~~~~----------------~~~~~~~sp~~~~~~~~~P~Lii~G~~D 841 (954)
|++++++|++++....... .. .+... ....... ...+...-......++++|+|+++|++|
T Consensus 173 ~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~~ 252 (319)
T 3lcr_A 173 GLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQP 252 (319)
T ss_dssp TCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESSC
T ss_pred CCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCCC
Confidence 7889999998765321110 00 00000 0000000 0011111111122578899999999984
Q ss_pred CCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCc-ccHHHHHHHHHHHHHHhc
Q 002194 842 NNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 842 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l 898 (954)
.++ +.....+.+.+... .+++++++ +|..... +....+.+.|.+||.+..
T Consensus 253 -~~~--~~~~~~~~~~~~~~---~~~~~~~g-~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 253 -LVE--QEKPEWRGDVLAAM---GQVVEAPG-DHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp -SSS--CCCTHHHHHHHHTC---SEEEEESS-CTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred -CCC--cccchhhhhcCCCC---ceEEEeCC-CcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 555 56666776666543 57778887 5654333 578889999999998864
No 361
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.18 E-value=6.2e-10 Score=120.64 Aligned_cols=196 Identities=15% Similarity=0.135 Sum_probs=117.7
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCCCCcccc---hhhHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEA 745 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~ 745 (954)
.|.||++||++.... .| ......|++ .+|.|++ .|.+|+|.+... ........+|+.+
T Consensus 38 ~p~lvllHG~~~~~~-----------~w----~~~~~~L~~~~~~~via---~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ 99 (316)
T 3c5v_A 38 GPVLLLLHGGGHSAL-----------SW----AVFTAAIISRVQCRIVA---LDLRSHGETKVKNPEDLSAETMAKDVGN 99 (316)
T ss_dssp SCEEEEECCTTCCGG-----------GG----HHHHHHHHTTBCCEEEE---ECCTTSTTCBCSCTTCCCHHHHHHHHHH
T ss_pred CcEEEEECCCCcccc-----------cH----HHHHHHHhhcCCeEEEE---ecCCCCCCCCCCCccccCHHHHHHHHHH
Confidence 478999999642110 11 123444544 2899999 677888888543 1235677889888
Q ss_pred HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh--CCCcccEEEEeccCCCCC------------CCCCCCccc-c---
Q 002194 746 AVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYNRT------------LTPFGFQNE-D--- 807 (954)
Q Consensus 746 av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~~~~------------~~~~~~~~~-~--- 807 (954)
.++.+... + ++++.|+||||||.+|+.+|.+ +|+ ++++|++++..... ..+..+... .
T Consensus 100 ~l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3c5v_A 100 VVEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIE 175 (316)
T ss_dssp HHHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHH
T ss_pred HHHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHH
Confidence 88887422 1 2589999999999999999996 466 89998876421000 000000000 0
Q ss_pred --------chhh---h-cHHHHH-------------------hcCc--------------ccccCCCCCCEEEEEeCCCC
Q 002194 808 --------RTLW---E-ATSTYV-------------------EMSP--------------FMSANKLKKPILLVHGEEDN 842 (954)
Q Consensus 808 --------~~~~---~-~~~~~~-------------------~~sp--------------~~~~~~~~~P~Lii~G~~D~ 842 (954)
.... . .+.... .... ...+.++++|+|+++|+.|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~ 255 (316)
T 3c5v_A 176 WSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDR 255 (316)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCC
T ss_pred HhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccc
Confidence 0000 0 000000 0000 00112578999999999997
Q ss_pred CCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 843 NSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 843 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
..+ .... ..+. ..++++++|++||... .+..+.+.+.|.+||.+.
T Consensus 256 ~~~--~~~~----~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 256 LDK--DLTI----GQMQ---GKFQMQVLPQCGHAVH-EDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp CCH--HHHH----HHHT---TCSEEEECCCCSSCHH-HHSHHHHHHHHHHHHHHT
T ss_pred ccc--HHHH----HhhC---CceeEEEcCCCCCccc-ccCHHHHHHHHHHHHHhc
Confidence 643 2111 1221 2358999999999874 566778889999999764
No 362
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.17 E-value=2.4e-09 Score=114.67 Aligned_cols=251 Identities=10% Similarity=0.022 Sum_probs=149.8
Q ss_pred CCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCcc
Q 002194 112 PALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKL 191 (954)
Q Consensus 112 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~ 191 (954)
.+++|+|||+.|+++... . ..|++|+..+ + .+.+.. ....+
T Consensus 31 eg~~~d~~g~~l~~~~~~----------------------~----------~~i~~~~~~~----~-~~~~~~--~~~~~ 71 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVR----------------------Q----------NRTWAWSDDG----Q-LSPEMH--PSHHQ 71 (296)
T ss_dssp EEEEEEGGGTEEEEEEGG----------------------G----------TEEEEEETTS----C-EEEEES--SCSSE
T ss_pred cCCeEeCCCCEEEEEeCC----------------------C----------CEEEEEECCC----C-eEEEEC--CCCCc
Confidence 478999999977776542 0 3688888743 3 344432 22356
Q ss_pred cceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCC
Q 002194 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (954)
Q Consensus 192 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~ 271 (954)
..++++|||+.++.. .+...|++++.++|+.+.+...........+..++++|||++++..... +.
T Consensus 72 ~~l~~~~dg~l~v~~---------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~--g~--- 137 (296)
T 3e5z_A 72 NGHCLNKQGHLIACS---------HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTY--GI--- 137 (296)
T ss_dssp EEEEECTTCCEEEEE---------TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSH--HH---
T ss_pred ceeeECCCCcEEEEe---------cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcc--cc---
Confidence 778999999854432 1346899999978877666432111101114578999999855532000 00
Q ss_pred CCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCCC-ccccccccCCCCcEEEEEe
Q 002194 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISS 350 (954)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s 350 (954)
... . .......+ .....||.++.+|+.+.+... .....++|||||+.+ ++.
T Consensus 138 ------------~~~--------~-~~~~~~~~------~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~l-v~~ 189 (296)
T 3e5z_A 138 ------------DKP--------E-EGYGGEME------LPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLL-VSD 189 (296)
T ss_dssp ------------HCG--------G-GSSCCCCC------SSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEE-EEE
T ss_pred ------------ccc--------c-cccccccc------CCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEE-EEe
Confidence 000 0 00000000 023468888877766666554 556788999999998 554
Q ss_pred ecCCcccccccCCCCcceEEEecc-CceE---EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 351 IHRPYSFIVPCGRFPRQVGVWTTD-GIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~l~d~~-g~~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
.. ...|++|+++ .+.. ..+... . ...+..+++++||+ |++.
T Consensus 190 ~~------------~~~i~~~~~~~~g~~~~~~~~~~~--~----------~~~p~~i~~d~~G~-l~v~---------- 234 (296)
T 3e5z_A 190 TG------------DNATHRYCLNARGETEYQGVHFTV--E----------PGKTDGLRVDAGGL-IWAS---------- 234 (296)
T ss_dssp TT------------TTEEEEEEECSSSCEEEEEEEECC--S----------SSCCCSEEEBTTSC-EEEE----------
T ss_pred CC------------CCeEEEEEECCCCcCcCCCeEeeC--C----------CCCCCeEEECCCCC-EEEE----------
Confidence 22 2379999986 3333 222211 1 12345789999996 3333
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEeecccccCceee-ccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISW-CDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~-spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
. .+.|++++. ++.....+..... +..++| +||++.|+.++. ..||.+++.+.
T Consensus 235 ---~-~~~v~~~~~---~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~ 287 (296)
T 3e5z_A 235 ---A-GDGVHVLTP---DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVR 287 (296)
T ss_dssp ---E-TTEEEEECT---TSCEEEEEECSSC-CCEEEEESTTSCEEEEEET-----TEEEEEECSCC
T ss_pred ---c-CCeEEEECC---CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-----CeEEEEEcccc
Confidence 1 347888885 5554455555555 788899 589998888753 25999998875
No 363
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.16 E-value=2e-08 Score=108.26 Aligned_cols=282 Identities=12% Similarity=0.107 Sum_probs=162.4
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
+.+.+.|||++ .||... ...|+++|+++|+..++...... ...+..++|+|||+.|+...
T Consensus 27 y~~~l~WS~~~-~lAvg~----------D~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sgs------- 86 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVAL----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGT------- 86 (318)
T ss_dssp TCBCEEECTTS-EEEEEE----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEE-------
T ss_pred cceEEEECCCC-EEEEEe----------CCEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEEE-------
Confidence 34568999987 666542 35788999999987665433221 11267899999999998761
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCCccccccccCCCCcEEEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILI 348 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~~~~~~~~~SpDGk~l~~ 348 (954)
....|.++++ +|+..............++++++.++.
T Consensus 87 ------------------------------------------~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s 124 (318)
T 4ggc_A 87 ------------------------------------------SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSS 124 (318)
T ss_dssp ------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred ------------------------------------------CCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEE
Confidence 1234667777 665433222211223456778888777
Q ss_pred EeecCCcccccccCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 349 ~s~~~~~~~~~~~~~~~~~l~l~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
.+.. ..+.+|+..... ...+..+. ..+....|+++|+.++..
T Consensus 125 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~s~---------- 168 (318)
T 4ggc_A 125 GSRS-------------GHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRHLASG---------- 168 (318)
T ss_dssp EETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE----------
T ss_pred EecC-------------CceEeeecCCCceeEEEEcCcc-------------CceEEEEEcCCCCEEEEE----------
Confidence 6633 256667666432 22222221 234567899999866554
Q ss_pred ccccCCCeEEEEecCCCCCCC----ceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~----~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 502 (954)
+..+.|.+|++ ..+.. ..........+..+.|+|++..+++...... ...|.+.+.... ...... ..
T Consensus 169 ---~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~i~lwd~~~~--~~~~~~-~~ 239 (318)
T 4ggc_A 169 ---GNDNLVNVWPS--APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS-DRHIRIWNVCSG--ACLSAV-DA 239 (318)
T ss_dssp ---ETTSCEEEEES--SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT-TCEEEEEETTTC--CEEEEE-EC
T ss_pred ---ecCcceeEEEC--CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC-CCEEEEEecccc--cccccc-cc
Confidence 33557888886 22221 1222334555677899999887765543222 133445555553 112221 12
Q ss_pred CCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEe
Q 002194 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (954)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 582 (954)
...+.. ..|+|+++.++..... ....|++||+.+++.......... .+..
T Consensus 240 ~~~v~~------~~~~~~~~~~~~~sg~-------------------~d~~i~iwd~~~~~~~~~l~gH~~----~V~~- 289 (318)
T 4ggc_A 240 HSQVCS------ILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGHTS----RVLS- 289 (318)
T ss_dssp SSCEEE------EEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCCSS----CEEE-
T ss_pred eeeeee------eeecccccceEEEEEc-------------------CCCEEEEEECCCCcEEEEEcCCCC----CEEE-
Confidence 222222 6789999888776511 123499999998876554433211 1222
Q ss_pred ccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002194 583 MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (954)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~ 618 (954)
.+|+|||+.|+.... -..+.+|++.+
T Consensus 290 ------l~~spdg~~l~S~s~----D~~v~iWd~~~ 315 (318)
T 4ggc_A 290 ------LTMSPDGATVASAAA----DETLRLWRCFE 315 (318)
T ss_dssp ------EEECTTSSCEEEEET----TTEEEEECCSC
T ss_pred ------EEEcCCCCEEEEEec----CCeEEEEECCC
Confidence 468999987663322 24588888644
No 364
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.15 E-value=1.5e-10 Score=124.45 Aligned_cols=200 Identities=19% Similarity=0.108 Sum_probs=114.9
Q ss_pred CccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHH
Q 002194 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (954)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~ 748 (954)
..|.||++||..... ++..| ...... ...+|.|+. ++..|+|.+...........+|+.+.
T Consensus 66 ~~~~lvllhG~~~~~---------~~~~~----~~~~~~-l~~~~~v~~---~d~~G~G~s~~~~~~~~~~a~~~~~~-- 126 (300)
T 1kez_A 66 GEVTVICCAGTAAIS---------GPHEF----TRLAGA-LRGIAPVRA---VPQPGYEEGEPLPSSMAAVAAVQADA-- 126 (300)
T ss_dssp CSSEEEECCCSSTTC---------STTTT----HHHHHH-TSSSCCBCC---CCCTTSSTTCCBCSSHHHHHHHHHHH--
T ss_pred CCCeEEEECCCcccC---------cHHHH----HHHHHh-cCCCceEEE---ecCCCCCCCCCCCCCHHHHHHHHHHH--
Confidence 368899999963211 00111 122222 235799998 66778887654433345555554433
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC---CcccEEEEeccCCCCCCCC----------CCCcccc----chhh
Q 002194 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGAYNRTLTP----------FGFQNED----RTLW 811 (954)
Q Consensus 749 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~~~~~~~~----------~~~~~~~----~~~~ 811 (954)
+.+. .+..++.++||||||.+++.++.+.| ++++++|++++........ ..+.... ....
T Consensus 127 -l~~~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (300)
T 1kez_A 127 -VIRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRL 203 (300)
T ss_dssp -HHHH--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHH
T ss_pred -HHHh--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHH
Confidence 3332 23468999999999999999999987 4899999988754321100 0000000 0000
Q ss_pred hcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHH
Q 002194 812 EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETD 891 (954)
Q Consensus 812 ~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 891 (954)
.....+...-......++++|+|+++|+ |..++ +.. ..+.+ ....+++++++++ +|.....+....+.+.|.
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~--~~~-~~~~~---~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~ 275 (300)
T 1kez_A 204 TALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGP--WPD-DSWKP---TWPFEHDTVAVPG-DHFTMVQEHADAIARHID 275 (300)
T ss_dssp HHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSC--CCS-SCCSC---CCSSCCEEEEESS-CTTTSSSSCSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCC--Ccc-cchhh---hcCCCCeEEEecC-CChhhccccHHHHHHHHH
Confidence 0011111111111246788999999995 66665 433 22211 1123468999999 998753366678888888
Q ss_pred HHHHHhc
Q 002194 892 RWLQKYC 898 (954)
Q Consensus 892 ~fl~~~l 898 (954)
+||.+..
T Consensus 276 ~fl~~~~ 282 (300)
T 1kez_A 276 AWLGGGN 282 (300)
T ss_dssp HHHTCC-
T ss_pred HHHHhcc
Confidence 8887653
No 365
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.15 E-value=1e-09 Score=117.28 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=75.2
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCC
Q 002194 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (954)
Q Consensus 647 ~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (954)
.+|.+++.... + . -|.||++||.+.... .|. .... .++.+|.|++ .+..|+
T Consensus 12 ~~~~~~~~~~~---g-----~--g~~~vllHG~~~~~~-----------~w~----~~~~-~l~~~~~vi~---~Dl~G~ 62 (291)
T 3qyj_A 12 TTEARINLVKA---G-----H--GAPLLLLHGYPQTHV-----------MWH----KIAP-LLANNFTVVA---TDLRGY 62 (291)
T ss_dssp CSSCEEEEEEE---C-----C--SSEEEEECCTTCCGG-----------GGT----TTHH-HHTTTSEEEE---ECCTTS
T ss_pred cCCeEEEEEEc---C-----C--CCeEEEECCCCCCHH-----------HHH----HHHH-HHhCCCEEEE---EcCCCC
Confidence 57788876543 1 1 367889999753211 121 1222 3467999999 666788
Q ss_pred CCcccch-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEecc
Q 002194 727 GDEEAND-------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (954)
Q Consensus 727 G~~~~~~-------~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (954)
|.+..+. .......+|+.+.++.+ ..+++.++||||||.+++.++.++|++++++|++++
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (291)
T 3qyj_A 63 GDSSRPASVPHHINYSKRVMAQDQVEVMSKL------GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129 (291)
T ss_dssp TTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHc------CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECC
Confidence 8775432 12344556666555443 235799999999999999999999999999998864
No 366
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.15 E-value=4.1e-09 Score=117.19 Aligned_cols=134 Identities=8% Similarity=0.003 Sum_probs=79.4
Q ss_pred ccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 336 ~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
.+.+++||+.++|.+.. +.+++.|..++..+.+...+......+.......+...++++|||+++++
T Consensus 269 ~~~~~~dg~~~~~~s~~-------------g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyV 335 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTYT-------------GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYL 335 (426)
T ss_dssp CCEECTTTCEEEEEBTT-------------SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEE
T ss_pred EeeecCCCCEEEEEeCC-------------CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEE
Confidence 45679999999998732 37899998866544333211110000000011123345789999998777
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
.......+. .....+.|.++|+ .+.+. ..+. ......++.|+|||+.++|..+... ..|.++|+.+.
T Consensus 336 a~~~~~~gt---hk~~s~~VsVID~---~T~kvv~~I~-vg~~P~gia~spDg~~~lyv~n~~s--~~VsVID~~t~ 403 (426)
T 3c75_H 336 LVDQRDEWK---HKAASRFVVVLNA---ETGERINKIE-LGHEIDSINVSQDAEPLLYALSAGT--QTLHIYDAATG 403 (426)
T ss_dssp EEEECCTTC---TTSCEEEEEEEET---TTCCEEEEEE-EEEEECEEEECCSSSCEEEEEETTT--TEEEEEETTTC
T ss_pred Eeccccccc---ccCCCCEEEEEEC---CCCeEEEEEE-CCCCcCeEEEccCCCEEEEEEcCCC--CeEEEEECCCC
Confidence 643211000 0012357999996 44443 3443 2335788999999996667766433 46999999986
No 367
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.14 E-value=3.3e-09 Score=115.68 Aligned_cols=239 Identities=13% Similarity=0.042 Sum_probs=136.3
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
..|++|+..+ ++.+.+.. .....+..++|+|||+.++.... +......|++++.+++..+.+......
T Consensus 66 ~~i~~~d~~~----~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~-----~~~~~~~i~~~d~~~~~~~~~~~~~~~-- 133 (333)
T 2dg1_A 66 GNIFKINPET----KEIKRPFV-SHKANPAAIKIHKDGRLFVCYLG-----DFKSTGGIFAATENGDNLQDIIEDLST-- 133 (333)
T ss_dssp CEEEEECTTT----CCEEEEEE-CSSSSEEEEEECTTSCEEEEECT-----TSSSCCEEEEECTTSCSCEEEECSSSS--
T ss_pred CEEEEEeCCC----CcEEEEee-CCCCCcceEEECCCCcEEEEeCC-----CCCCCceEEEEeCCCCEEEEEEccCcc--
Confidence 3688888743 44444431 12235778899999975444321 111236899999998876643221110
Q ss_pred cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-
Q 002194 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (954)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~- 321 (954)
...+..+.++|||++++..... . ..+ ....||+++.
T Consensus 134 ~~~~~~i~~d~~g~l~v~~~~~-~-----------------------------------~~~-------~~~~l~~~~~~ 170 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTDFRG-Y-----------------------------------STN-------PLGGVYYVSPD 170 (333)
T ss_dssp CCCEEEEEECTTSCEEEEECCC-B-----------------------------------TTB-------CCEEEEEECTT
T ss_pred CCcccceEECCCCCEEEEeccc-c-----------------------------------ccC-------CCceEEEEeCC
Confidence 0115578899999755543100 0 000 2346888888
Q ss_pred CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc--CceEEEeccCCCcccCCccccccc
Q 002194 322 DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD--GIFVRELCDLPLAEDIPIAFNSVR 398 (954)
Q Consensus 322 ~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~--g~~~~~l~~~~~~~~~p~~~~~~~ 398 (954)
+++.+.+... .....++|+|||++|++..... ..|++|+++ +.....+....... +.+.
T Consensus 171 ~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~------------~~i~~~d~~~~g~~~~~~~~~~~~~-----~~~~- 232 (333)
T 2dg1_A 171 FRTVTPIIQNISVANGIALSTDEKVLWVTETTA------------NRLHRIALEDDGVTIQPFGATIPYY-----FTGH- 232 (333)
T ss_dssp SCCEEEEEEEESSEEEEEECTTSSEEEEEEGGG------------TEEEEEEECTTSSSEEEEEEEEEEE-----CCSS-
T ss_pred CCEEEEeecCCCcccceEECCCCCEEEEEeCCC------------CeEEEEEecCCCcCcccccceEEEe-----cCCC-
Confidence 5566655433 4456789999999888775322 278899985 33332221000000 0000
Q ss_pred cCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeeccc------ccCceeeccCCceEEE
Q 002194 399 KGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVY 472 (954)
Q Consensus 399 ~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~ 472 (954)
..+..+.+++||+ + |... ...+.|++++. ++.....+..... .+..++|+|||+.|++
T Consensus 233 ~~~~~i~~d~~G~-l-~v~~-----------~~~~~v~~~d~---~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 233 EGPDSCCIDSDDN-L-YVAM-----------YGQGRVLVFNK---RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp SEEEEEEEBTTCC-E-EEEE-----------ETTTEEEEECT---TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred CCCCceEECCCCC-E-EEEE-----------cCCCEEEEECC---CCCEEEEEEcCCCccccccCcceEEECCCCCEEEE
Confidence 1234688999996 2 2211 12347888884 5444444433322 4678999999988887
Q ss_pred EEeccc--cceEEEEEcCCC
Q 002194 473 ESWYKT--RRTRTWVISPGS 490 (954)
Q Consensus 473 ~~~~~~--~~~~l~~~d~~~ 490 (954)
+..... ....||.+++..
T Consensus 297 ~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 297 CSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEECGGGTCCEEEEEEECSS
T ss_pred EeCccCCCCCceEEEEeccc
Confidence 765432 236789888764
No 368
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.13 E-value=9.1e-09 Score=116.75 Aligned_cols=231 Identities=9% Similarity=0.069 Sum_probs=134.7
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCC----------Cce-eecccCCCccccccccceeEecCCe-
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT----------GKA-RPLFQSPDIYLNAIFDNFVWVNNST- 256 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~----------g~~-~~lt~~~~~~~~~~~~~~~wspDG~- 256 (954)
..+..++|+|++..++++.. . ...|.++++.. ... ..+..+.. .+..+.|+|+++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~------~--dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKT------P--SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-----EGYGLSWNPNLNG 195 (430)
T ss_dssp SCCSEEEEETTEEEEEEEEC------S--SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-----CCCCEEECTTSTT
T ss_pred CcEEEEEECCCCCcEEEEEC------C--CCcEEEEECCCcccccCccccCCCcEEecCCCC-----CeEEEEeCCCCCC
Confidence 46899999998555555432 2 34566667654 121 22222222 266899999998
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CC-c-------eeE
Q 002194 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-T-------VKE 327 (954)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G-~-------~~~ 327 (954)
.|+... ..+.|.++++ ++ . ...
T Consensus 196 ~l~s~~-------------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~ 226 (430)
T 2xyi_A 196 YLLSAS-------------------------------------------------DDHTICLWDINATPKEHRVIDAKNI 226 (430)
T ss_dssp EEEEEC-------------------------------------------------TTSCEEEEETTSCCBGGGEEECSEE
T ss_pred eEEEEe-------------------------------------------------CCCeEEEEeCCCCCCCCceecccee
Confidence 776551 1234666666 42 1 122
Q ss_pred cCCC-ccccccccCCCCc-EEEEEeecCCcccccccCCCCcceEEEeccCce----EEEeccCCCcccCCccccccccCc
Q 002194 328 IGPP-AVYTSLDPSPDEK-YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGM 401 (954)
Q Consensus 328 l~~~-~~~~~~~~SpDGk-~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~----~~~l~~~~~~~~~p~~~~~~~~g~ 401 (954)
+... ..+..++|+|++. .++..+ . .+.|.+||+..+. ...+.. ....+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~-~------------dg~i~i~d~~~~~~~~~~~~~~~-------------~~~~v 280 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVA-D------------DQKLMIWDTRNNNTSKPSHTVDA-------------HTAEV 280 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEE-T------------TSEEEEEETTCSCSSSCSEEEEC-------------CSSCE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEe-C------------CCeEEEEECCCCCCCcceeEeec-------------CCCCe
Confidence 3333 6678899999554 444444 2 2389999998542 122211 22456
Q ss_pred cceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCC-CCCceEEeecccccCceeeccCCceEEEEEeccccc
Q 002194 402 RSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (954)
Q Consensus 402 ~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (954)
+.++|+|+++.+++.. +..+.|.+|++ .. +.....+..+...+..+.|+|+++.++++...++ .
T Consensus 281 ~~i~~~p~~~~~l~tg------------~~dg~v~vwd~--~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~-~ 345 (430)
T 2xyi_A 281 NCLSFNPYSEFILATG------------SADKTVALWDL--RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-R 345 (430)
T ss_dssp EEEEECSSCTTEEEEE------------ETTSEEEEEET--TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-C
T ss_pred EEEEeCCCCCCEEEEE------------eCCCeEEEEeC--CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC-c
Confidence 7899999999765541 23457899996 22 2334556667778889999999987666655543 2
Q ss_pred eEEEEEcCCCCC----------CCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 481 TRTWVISPGSKD----------VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 481 ~~l~~~d~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
..||.+...+.. .........+...+.. +.|+|+++++++..
T Consensus 346 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 346 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD------FSWNPNEPWIICSV 397 (430)
T ss_dssp CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE------EEECSSSTTEEEEE
T ss_pred EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE------EEECCCCCCEEEEE
Confidence 566665542210 0111222222223333 78999999554444
No 369
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.13 E-value=1.7e-09 Score=132.14 Aligned_cols=229 Identities=12% Similarity=0.103 Sum_probs=139.5
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCc--eeecccCCCccccccccceeEecC--CeEEEEEecC
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK--ARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPL 264 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~~~ 264 (954)
..+..++|||||+.|+... . ...|.++++.++. .......... .+..+.|+|+ |+.|+...
T Consensus 10 ~~V~~l~~s~dg~~latg~-------~--dg~I~vwd~~~~~~~~~~~l~~h~~----~V~~l~~s~~~~~~~l~s~s-- 74 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCS-------S--DKTIKIFEVEGETHKLIDTLTGHEG----PVWRVDWAHPKFGTILASCS-- 74 (753)
T ss_dssp CCEEEECCCSSSCCEEEEE-------T--TTEEEEEEEETTEEEEEEEECCCSS----CEEEEEECCTTSCSEEEEEE--
T ss_pred ceeEEEEECCCCCeEEEEE-------C--CCcEEEEecCCCCCccceeccCCcC----ceEEEEecCCCCCCEEEEEe--
Confidence 4688899999999988864 2 3355555555433 2222222222 2778999988 88888761
Q ss_pred CCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc---eeEcCCC-cccccccc
Q 002194 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDP 339 (954)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~---~~~l~~~-~~~~~~~~ 339 (954)
..+.|.++++ ++. ...+... ..+..++|
T Consensus 75 -----------------------------------------------~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 75 -----------------------------------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 107 (753)
T ss_dssp -----------------------------------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred -----------------------------------------------CCCeEEEEECCCCcccccccccCCCCCeEEEEE
Confidence 1234667777 663 3334434 77889999
Q ss_pred CCC--CcEEEEEeecCCcccccccCCCCcceEEEeccCceE---EEeccCCCcccCCccccccccCccceeecc------
Q 002194 340 SPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRS------ 408 (954)
Q Consensus 340 SpD--Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~wsp------ 408 (954)
+|+ |+.++..+.+ +.+.+||+.++.. ..+.. ....+..+.|+|
T Consensus 108 sp~~~~~~l~sgs~d-------------g~I~vwdl~~~~~~~~~~~~~-------------~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 108 APHEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIIIDA-------------HAIGVNSASWAPATIEED 161 (753)
T ss_dssp CCGGGCSEEEEEETT-------------SEEEEEECCSSSCCCCEEEEC-------------CSSCEEEEEECCCC----
T ss_pred CCCCCCCEEEEEeCC-------------CcEEEEEeecCCCcceeEeec-------------CCCceEEEEecCcccccc
Confidence 999 9999888743 3899999986521 11111 223456788998
Q ss_pred -------CCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc----eEEeecccccCceeeccC---CceEEEEE
Q 002194 409 -------DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP----EILHKLDLRYGGISWCDD---SLALVYES 474 (954)
Q Consensus 409 -------Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~----~~l~~~~~~~~~~~~spD---g~~l~~~~ 474 (954)
||+.++.. +..+.|.+|++ ..+... ..+..+...+..++|+|+ |+.|+..+
T Consensus 162 ~~~~~~~d~~~l~sg-------------s~dg~I~iwd~--~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 162 GEHNGTKESRKFVTG-------------GADNLVKIWKY--NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp -----CGGGCCEEEE-------------ETTSCEEEEEE--ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred cccccCCCCCEEEEE-------------ECCCeEEEEec--cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 57766554 33557888886 222222 223445667888999999 78777776
Q ss_pred eccccceEEEEEcCCCCCCCcEEE-ecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 475 WYKTRRTRTWVISPGSKDVAPRIL-FDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 475 ~~~~~~~~l~~~d~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
.++. .++|.+............ .......+.. ++|+|||++++...
T Consensus 227 ~Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~v~~------l~~spdg~~l~s~s 273 (753)
T 3jro_A 227 QDRT--CIIWTQDNEQGPWKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (753)
T ss_dssp SSSC--EEEEEESSSSSCCBCCBSSSSCCSSCCCC------EEECTTTCCEEEEC
T ss_pred cCCE--EEEecCCCCCCcceeEEeccCCCCCceEE------EEEcCCCCEEEEEc
Confidence 5443 666666543321010111 1111122222 78999999888765
No 370
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.13 E-value=1.3e-09 Score=112.43 Aligned_cols=152 Identities=14% Similarity=0.124 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-----cccEEEEeccCCCCCCCCC---C--Cccc
Q 002194 737 EQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-----LFCCGIARSGAYNRTLTPF---G--FQNE 806 (954)
Q Consensus 737 ~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~~~~~~~~~~~---~--~~~~ 806 (954)
....+++.+++++|.++..+ +++.++||||||.+++.++.++|. +++.+|++++.++...... . ....
T Consensus 77 ~~~~~~l~~~i~~l~~~~~~--~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~ 154 (249)
T 3fle_A 77 KENAYWIKEVLSQLKSQFGI--QQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDK 154 (249)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--CEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCT
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcc
Confidence 44577888889999877433 589999999999999999998863 7999999998765321100 0 0000
Q ss_pred cchhhhcHHHHHhcC-cccccCCCCCCEEEEEeC------CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC--CCCcC
Q 002194 807 DRTLWEATSTYVEMS-PFMSANKLKKPILLVHGE------EDNNSGTLTMQSDRFFNALKGHGALCRLVILPF--ESHGY 877 (954)
Q Consensus 807 ~~~~~~~~~~~~~~s-p~~~~~~~~~P~Lii~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~~ 877 (954)
.+.+......|...- -...+.+.++|+|.|+|+ .|..|| ...++.+...++......+.+.+.| +.|..
T Consensus 155 ~g~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~--~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~ 232 (249)
T 3fle_A 155 QGKPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVS--NSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQ 232 (249)
T ss_dssp TCCBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSB--HHHHHTHHHHSTTCSSEEEEEEEESGGGSTGG
T ss_pred cCCCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCccc--HHHHHHHHHHHhhCCCceEEEEEeCCCCchhc
Confidence 111111112222211 012223356899999998 699998 8888887777777777777777876 88987
Q ss_pred CCcccHHHHHHHHHHHH
Q 002194 878 AARESIMHVLWETDRWL 894 (954)
Q Consensus 878 ~~~~~~~~~~~~i~~fl 894 (954)
.. ++ ..+.+.|.+||
T Consensus 233 l~-~n-~~V~~~I~~FL 247 (249)
T 3fle_A 233 LH-EN-KDVANEIIQFL 247 (249)
T ss_dssp GG-GC-HHHHHHHHHHH
T ss_pred cc-cC-HHHHHHHHHHh
Confidence 53 33 47778888887
No 371
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.13 E-value=5.2e-09 Score=114.79 Aligned_cols=232 Identities=9% Similarity=-0.000 Sum_probs=137.6
Q ss_pred ceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCcccc
Q 002194 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (954)
Q Consensus 114 ~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~ 193 (954)
.++++|++.|+..+.+ +.|++|++.. + .....+. ...+..
T Consensus 42 ~~~~~d~~~l~sg~~D---------------------------------g~v~iwd~~~-~--~~~~~~~----~~~v~~ 81 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCED---------------------------------GALHFTQLKD-S--KTITTIT----TPNPRT 81 (343)
T ss_dssp SSSSEEEEEEEEEEET---------------------------------TEEEEEEESS-S--SCEEEEE----EECCCT
T ss_pred hhhcCCCCEEEEECCC---------------------------------CcEEEEECCC-C--cEEEEEe----cCCcee
Confidence 4567899988888776 5899999964 2 1222332 123556
Q ss_pred eeecCCCCeEEEEEeeccccCCCCce-------EEEEEECCCCce-eecccCCCccccccccceeEec--CCeEEEEEec
Q 002194 194 VTWSQDGKHLAFSIRIDAEDSSSSKL-------RVWVADVDTGKA-RPLFQSPDIYLNAIFDNFVWVN--NSTLLVCTIP 263 (954)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~-------~l~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~wsp--DG~~l~~~~~ 263 (954)
..|+|+ |+..+ .++.. .+.+++..+++. +.+...... .+..+.|+| +|+.|+...
T Consensus 82 ~~~~~~---~~s~s-------~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~s~s- 146 (343)
T 3lrv_A 82 GGEHPA---IISRG-------PCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN----EIIYMYGHNEVNTEYFIWAD- 146 (343)
T ss_dssp TCCCCS---EEEEC-------STTEEEEEETTTEEEEEETTTCCEEEEEECCCSS----CEEEEECCC---CCEEEEEE-
T ss_pred eeeCCc---eEEec-------CCCeEEEEEccCceEEeecCCcceeEEeecCCCC----CEEEEEcCCCCCCCEEEEEe-
Confidence 666765 33321 11222 333455556552 222212211 267899999 999888661
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcC-CC--cccccccc
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG-PP--AVYTSLDP 339 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~-~~--~~~~~~~~ 339 (954)
....|.++|+ +++...+. .. ..+..++|
T Consensus 147 ------------------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~ 178 (343)
T 3lrv_A 147 ------------------------------------------------NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVL 178 (343)
T ss_dssp ------------------------------------------------TTCCEEEEESSSSCEEEEECCCSSCCCCEEEE
T ss_pred ------------------------------------------------CCCcEEEEECCCCcEEEEEecCCCCceEEEEE
Confidence 1234777888 67654433 22 46788999
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~ 417 (954)
+|||+.|+..+.+ +.|.+||+..++. ..+.. ++...+..++|+|||+.++..
T Consensus 179 ~pdg~~lasg~~d-------------g~i~iwd~~~~~~~~~~~~~------------~h~~~v~~l~fs~~g~~l~s~- 232 (343)
T 3lrv_A 179 HKDSLLLALYSPD-------------GILDVYNLSSPDQASSRFPV------------DEEAKIKEVKFADNGYWMVVE- 232 (343)
T ss_dssp CTTSCEEEEECTT-------------SCEEEEESSCTTSCCEECCC------------CTTSCEEEEEECTTSSEEEEE-
T ss_pred CCCCCEEEEEcCC-------------CEEEEEECCCCCCCccEEec------------cCCCCEEEEEEeCCCCEEEEE-
Confidence 9999999887633 3899999986542 22322 012456789999999876665
Q ss_pred EeccCCCccccccCCCeEEEEecCCCCCCCceEEee---cccccC--ceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK---LDLRYG--GISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~---~~~~~~--~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
+ .+.|.+||+ ..+.....+.. ....+. .++|+|+|++|+..+..++ ..+||.++...
T Consensus 233 ------------~-~~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~-~i~v~~~~~~~ 294 (343)
T 3lrv_A 233 ------------C-DQTVVCFDL--RKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN-SLTIYKFDKKT 294 (343)
T ss_dssp ------------E-SSBEEEEET--TSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT-EEEEEEECTTT
T ss_pred ------------e-CCeEEEEEc--CCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC-cEEEEEEcccc
Confidence 2 337899996 23222222221 223334 3999999999998765232 36777776544
No 372
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.12 E-value=9e-10 Score=115.05 Aligned_cols=154 Identities=15% Similarity=0.082 Sum_probs=103.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-----cccEEEEeccCCCCCCC-----CCCCc
Q 002194 735 FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-----LFCCGIARSGAYNRTLT-----PFGFQ 804 (954)
Q Consensus 735 ~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~~~~~~~~~-----~~~~~ 804 (954)
......+|+.++++.+.++..+ +++.++||||||.+++.++.++|+ +++++|++++.++.... .+.+.
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~ 149 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFK 149 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCS
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccc
Confidence 3466778888888988877433 589999999999999999999988 89999999987653221 00000
Q ss_pred cccchhhhcHHHHHhcCcccccCCCCCCEEEEEeC------CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC--CCCc
Q 002194 805 NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGE------EDNNSGTLTMQSDRFFNALKGHGALCRLVILPF--ESHG 876 (954)
Q Consensus 805 ~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~ 876 (954)
.. .........+... ...+.+ ++|+|.|||+ .|.+|| ...++.+...++.....++...+.+ ++|.
T Consensus 150 ~~-p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp--~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs 223 (254)
T 3ds8_A 150 KL-PNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVP--TISSLATRLFMPGSAKAYIEDIQVGEDAVHQ 223 (254)
T ss_dssp SC-SSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSB--HHHHTGGGGTSBTTBSEEEEEEEESGGGCGG
T ss_pred cC-CcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEee--HHHHHHHHHHhhccCcceEEEEEeCCCCchh
Confidence 00 0000111111111 111112 6899999999 999999 8888877776665545566666766 6687
Q ss_pred CCCcccHHHHHHHHHHHHHHhc
Q 002194 877 YAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl~~~l 898 (954)
.. .++. ++.+.+.+||.++.
T Consensus 224 ~l-~~~~-~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 224 TL-HETP-KSIEKTYWFLEKFK 243 (254)
T ss_dssp GG-GGSH-HHHHHHHHHHHTCC
T ss_pred cc-cCCH-HHHHHHHHHHHHhc
Confidence 64 3333 58888999998864
No 373
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.11 E-value=2.7e-08 Score=113.96 Aligned_cols=284 Identities=11% Similarity=0.040 Sum_probs=164.3
Q ss_pred eecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCC
Q 002194 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (954)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (954)
.+++|++.|+... ....|.++|+.+++........... +..+.|+||+ .|+...
T Consensus 127 ~~~~~~~~l~sgs---------~dg~i~vwd~~~~~~~~~~~~h~~~----V~~l~~~~~~-~l~s~s------------ 180 (464)
T 3v7d_B 127 CLQFEDNYVITGA---------DDKMIRVYDSINKKFLLQLSGHDGG----VWALKYAHGG-ILVSGS------------ 180 (464)
T ss_dssp EEEEETTEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEECSTT-EEEEEE------------
T ss_pred EEEECCCEEEEEc---------CCCcEEEEECCCCcEEEEEeCCCcC----EEEEEEcCCC-EEEEEe------------
Confidence 4556788877754 2457788888887765444333322 7789999999 455441
Q ss_pred CCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCC-ccccccccC--CCCcEEEEE
Q 002194 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPS--PDEKYILIS 349 (954)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~-~~~~~~~~S--pDGk~l~~~ 349 (954)
..+.|.++++ +|+.. .+... ..+..++|+ +|++.|+..
T Consensus 181 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~ 223 (464)
T 3v7d_B 181 -------------------------------------TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 223 (464)
T ss_dssp -------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEE
T ss_pred -------------------------------------CCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEE
Confidence 1234777788 66533 33333 667777777 688888887
Q ss_pred eecCCcccccccCCCCcceEEEeccCceEEEeccCCCc--------ccCCc---cccccccCccceeeccCCCCceEEEE
Q 002194 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLA--------EDIPI---AFNSVRKGMRSINWRSDKPSTLYWAE 418 (954)
Q Consensus 350 s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~--------~~~p~---~~~~~~~g~~~~~wspDg~~i~~~~~ 418 (954)
+.+ +.+.+||+.............. ...+. ...+... .-..++++++.++..
T Consensus 224 s~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~-- 286 (464)
T 3v7d_B 224 SRD-------------NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA--SVRTVSGHGNIVVSG-- 286 (464)
T ss_dssp ETT-------------SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS--CEEEEEEETTEEEEE--
T ss_pred cCC-------------CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc--eEEEEcCCCCEEEEE--
Confidence 743 3899999885432111100000 00000 0001111 123457777765554
Q ss_pred eccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002194 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (954)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 498 (954)
+..+.|.+|++ .++.....+..+...+..+.|+|||+.|+..+.++ .|.++|+.++ +....
T Consensus 287 -----------~~d~~i~vwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~--~~~~~ 347 (464)
T 3v7d_B 287 -----------SYDNTLIVWDV--AQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT----TIRIWDLENG--ELMYT 347 (464)
T ss_dssp -----------ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS----CEEEEETTTT--EEEEE
T ss_pred -----------eCCCeEEEEEC--CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC----cEEEEECCCC--cEEEE
Confidence 34567999996 23333344455666788899999999988776543 2566666664 33333
Q ss_pred ecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccce
Q 002194 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (954)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 578 (954)
...+...+.. +.|+ +++++.... ...|.+||+.+++..........
T Consensus 348 ~~~h~~~v~~------~~~~--~~~l~s~s~---------------------dg~v~vwd~~~~~~~~~~~~~~~----- 393 (464)
T 3v7d_B 348 LQGHTALVGL------LRLS--DKFLVSAAA---------------------DGSIRGWDANDYSRKFSYHHTNL----- 393 (464)
T ss_dssp ECCCSSCEEE------EEEC--SSEEEEEET---------------------TSEEEEEETTTCCEEEEEECTTC-----
T ss_pred EeCCCCcEEE------EEEc--CCEEEEEeC---------------------CCcEEEEECCCCceeeeecCCCC-----
Confidence 3333332222 4444 566665541 23599999998775544432211
Q ss_pred eEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeE
Q 002194 579 TVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (954)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~ 623 (954)
.....|+++++.++... ...+.+|++.+++...
T Consensus 394 -------~~~~~~~~~~~~l~~~~-----dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 394 -------SAITTFYVSDNILVSGS-----ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp -------CCEEEEEECSSEEEEEE-----TTEEEEEETTTCCEEE
T ss_pred -------ccEEEEEeCCCEEEEec-----CCeEEEEECCCCcEEe
Confidence 11246888988666433 2579999998887544
No 374
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.09 E-value=4.8e-08 Score=106.50 Aligned_cols=281 Identities=11% Similarity=0.011 Sum_probs=150.3
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccC-CCCceEEEEEECCCCceeecccCCC-c
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDS-SSSKLRVWVADVDTGKARPLFQSPD-I 240 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~-~~~~~~l~~~d~~~g~~~~lt~~~~-~ 240 (954)
+.|+++|..+ .+ .+..++.+... ++.+||||++|+.+........ +.....|.++|+.+++...-...+. .
T Consensus 59 ~~V~ViD~~t----~~--v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 59 TQQFVIDGEA----GR--VIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 131 (386)
T ss_dssp EEEEEEETTT----TE--EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CEEEEEECCC----Ce--EEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence 4788888743 22 22222233333 4999999999888753110000 0124579999999887644322221 0
Q ss_pred cc--cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEE
Q 002194 241 YL--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (954)
Q Consensus 241 ~~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~ 318 (954)
.. ......+.++|||++++++.. . ....|.+
T Consensus 132 r~~~g~~P~~~a~spDGk~lyVan~---------------------~--------------------------~~~~VsV 164 (386)
T 3sjl_D 132 RFLVGTYPWMTSLTPDGKTLLFYQF---------------------S--------------------------PAPAVGV 164 (386)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEEC---------------------S--------------------------SSCEEEE
T ss_pred ccccCCCCceEEEcCCCCEEEEEEc---------------------C--------------------------CCCeEEE
Confidence 00 001347899999999997710 0 1234778
Q ss_pred EEe-CCce-eEcCCCc--------cccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcc
Q 002194 319 VSL-DGTV-KEIGPPA--------VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE 388 (954)
Q Consensus 319 ~~~-~G~~-~~l~~~~--------~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~ 388 (954)
+|+ +++. ..+..++ .-.-++.++||+++++...... .+ + +.. +..-...
T Consensus 165 ID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g------------~v-~-~~~-------~~~~~~~ 223 (386)
T 3sjl_D 165 VDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEG------------TP-E-ITH-------TEVFHPE 223 (386)
T ss_dssp EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSS------------CC-E-EEE-------CCCCSCT
T ss_pred EECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCC------------eE-E-Eee-------cceeccc
Confidence 888 6643 3332221 1111367888887666552211 22 1 110 0000011
Q ss_pred cCCccccccccCccceeec-cCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec----------cc-
Q 002194 389 DIPIAFNSVRKGMRSINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------DL- 456 (954)
Q Consensus 389 ~~p~~~~~~~~g~~~~~ws-pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~----------~~- 456 (954)
..++ ...+.|. +||+ ++|. +..+.+++++. .++..+.+... .+
T Consensus 224 ~~~~--------~~~~~~~~~dG~-~~~v-------------s~~g~V~v~d~---~~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 224 DEFL--------INHPAYSQKAGR-LVWP-------------TYTGKIHQIDL---SSGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp TSCB--------CSCCEEETTTTE-EEEE-------------BTTSEEEEEEC---TTSSCEECCCEESSCHHHHHTTEE
T ss_pred cccc--------cccceeEcCCCc-EEEE-------------eCCCEEEEEEC---CCCcceeecceecccccccccccc
Confidence 1111 0124564 6774 4444 22457999995 55544333211 11
Q ss_pred --ccCceeeccCCceEEEEEecc------ccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 457 --RYGGISWCDDSLALVYESWYK------TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 457 --~~~~~~~spDg~~l~~~~~~~------~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
....++++||+++|+.....+ ....+||++|+.+.....++..... .++ +.+|+||+.++|..
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~---~~~------lavs~D~~~~ly~t 349 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE---IDS------INVSQDEKPLLYAL 349 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE---ECE------EEECSSSSCEEEEE
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC---cce------EEECCCCCeEEEEE
Confidence 223478899999988875421 1236899999999632222222221 222 88999998666654
Q ss_pred eeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccC
Q 002194 529 KKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (954)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 571 (954)
.. ....|.++|..+++...-....
T Consensus 350 n~-------------------~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 350 ST-------------------GDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp ET-------------------TTTEEEEEETTTCCEEEEECCC
T ss_pred cC-------------------CCCeEEEEECCCCcEEEEecCC
Confidence 21 1234999999999876655544
No 375
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.09 E-value=9.4e-09 Score=112.06 Aligned_cols=236 Identities=10% Similarity=-0.008 Sum_probs=134.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
....++|+|||+ |+++.. ....|++++.++++.+.++...... +..++|+|||++++..... .
T Consensus 46 ~~~~~~~~~~g~-l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~----~~~i~~~~dg~l~v~~~~~-~--- 108 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDV--------FEGNIFKINPETKEIKRPFVSHKAN----PAAIKIHKDGRLFVCYLGD-F--- 108 (333)
T ss_dssp CEEEEEECTTSC-EEEEET--------TTCEEEEECTTTCCEEEEEECSSSS----EEEEEECTTSCEEEEECTT-S---
T ss_pred cccCcEECCCCC-EEEEEC--------CCCEEEEEeCCCCcEEEEeeCCCCC----cceEEECCCCcEEEEeCCC-C---
Confidence 457899999998 555431 2468999999998887765322221 6688999999866654100 0
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEc-CC--C-ccccccccCCCCc
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEI-GP--P-AVYTSLDPSPDEK 344 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l-~~--~-~~~~~~~~SpDGk 344 (954)
+ ....|++++. ++..+.+ .. . ..+..+.++|||+
T Consensus 109 ----------------------------------~-------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 109 ----------------------------------K-------STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp ----------------------------------S-------SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred ----------------------------------C-------CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence 0 1135888888 5555432 21 1 4456789999997
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
.++....... ......|+.++.++++.+.+.... .....++|+|||+.+++. +
T Consensus 148 l~v~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~i~~~~dg~~l~v~-~------ 200 (333)
T 2dg1_A 148 FYFTDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNI-------------SVANGIALSTDEKVLWVT-E------ 200 (333)
T ss_dssp EEEEECCCBT-------TBCCEEEEEECTTSCCEEEEEEEE-------------SSEEEEEECTTSSEEEEE-E------
T ss_pred EEEEeccccc-------cCCCceEEEEeCCCCEEEEeecCC-------------CcccceEECCCCCEEEEE-e------
Confidence 5554331100 001236888887766655543210 123568999999866554 1
Q ss_pred ccccccCCCeEEEEecCCCCCCCceEE-----eecc--cccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGEGPEIL-----HKLD--LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l-----~~~~--~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (954)
...+.|++++.+ .++.....+ .... .....+++++||+. +.+...+ ..|++++.++. ....
T Consensus 201 -----~~~~~i~~~d~~-~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~~---~~v~~~d~~g~--~~~~ 268 (333)
T 2dg1_A 201 -----TTANRLHRIALE-DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL-YVAMYGQ---GRVLVFNKRGY--PIGQ 268 (333)
T ss_dssp -----GGGTEEEEEEEC-TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE-EEEEETT---TEEEEECTTSC--EEEE
T ss_pred -----CCCCeEEEEEec-CCCcCcccccceEEEecCCCCCCCceEECCCCCE-EEEEcCC---CEEEEECCCCC--EEEE
Confidence 124578888851 122222221 1111 24456899999973 3333222 35888888542 2222
Q ss_pred EecCCCC------CccCCCCCCCeeeccCCcEEEEEEe
Q 002194 498 LFDRSSE------DVYSDPGSPMMRRTSTGTYVIAKIK 529 (954)
Q Consensus 498 l~~~~~~------~~~~~~~~~~~~~spdG~~l~~~~~ 529 (954)
+ ..... .+.+ ++|+|||+.|++...
T Consensus 269 ~-~~~~~~~g~~~~~~~------~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 269 I-LIPGRDEGHMLRSTH------PQFIPGTNQLIICSN 299 (333)
T ss_dssp E-ECTTGGGTCSCBCCE------EEECTTSCEEEEEEE
T ss_pred E-EcCCCccccccCcce------EEECCCCCEEEEEeC
Confidence 2 22111 1112 788999988877663
No 376
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.09 E-value=2.1e-10 Score=132.82 Aligned_cols=274 Identities=8% Similarity=-0.028 Sum_probs=150.3
Q ss_pred CCCCceecCC------CCEEEEEecCCCCCcccccccc--------------------ceeeeeeecCCCCCCcceeeEe
Q 002194 110 PLPALSFSPQ------RDKILFLKRRALPPLEELARPE--------------------EKLAGLRIDGKCNTRSRMSFYT 163 (954)
Q Consensus 110 ~~~~~~~SPD------G~~laf~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 163 (954)
.+..++|||+ |+.||..+.++...++++.... ..+..+.+.+. .....++.++
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCC
Confidence 4567899997 6799988888666666554321 12234445443 2233334447
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccce--eecCCC-CeEEEEEeeccccCCCCceEEEEEECCCCceee-cccCCC
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFV--TWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP-LFQSPD 239 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~--~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~~~ 239 (954)
.|.+|++.. +. .....+..+ ...+..+ .|+||| +.||..+. ...|.++|+.+++... +.....
T Consensus 288 tV~lWD~~~-~~-~~~~~~~~H--~~~V~sv~~~~s~~g~~~laS~S~---------D~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 288 FVAEFDLTD-PE-VPSFYDQVH--DSYILSVSTAYSDFEDTVVSTVAV---------DGYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp EEEEEETTB-CS-SCSEEEECS--SSCEEEEEEECCTTSCCEEEEEET---------TSEEEEECGGGHHHHCEEEEECS
T ss_pred EEEEEECCC-CC-CceEEeecc--cccEEEEEEEcCCCCCeEEEEecc---------CCeEEEEECCCCCcccccccccc
Confidence 899999964 20 112234332 2457777 689998 66666542 4567777876654322 111111
Q ss_pred ccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEE
Q 002194 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (954)
Q Consensus 240 ~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~ 319 (954)
. ..+..++|+|||+.|+.+. ....|.++
T Consensus 355 ~---~~v~~v~fsp~~~~l~s~~-------------------------------------------------~d~tv~lw 382 (524)
T 2j04_B 355 G---SNLVPVVYCPQIYSYIYSD-------------------------------------------------GASSLRAV 382 (524)
T ss_dssp C---CSCCCEEEETTTTEEEEEC-------------------------------------------------SSSEEEEE
T ss_pred c---CcccceEeCCCcCeEEEeC-------------------------------------------------CCCcEEEE
Confidence 0 0145789999999877651 11236667
Q ss_pred Ee-CCc-eeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccc
Q 002194 320 SL-DGT-VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNS 396 (954)
Q Consensus 320 ~~-~G~-~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~ 396 (954)
|+ ++. ...+... ..+.+++|||||+.|+..+.+ +.+.+|++.++. +..+..... . .
T Consensus 383 d~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D-------------gtv~lwd~~~~~---~~~~~~~~~-~----~ 441 (524)
T 2j04_B 383 PSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD-------------GSLIITNAARRL---LHGIKNSSA-T----Q 441 (524)
T ss_dssp ETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT-------------TEEECCBSCSST---TTCC-----------C
T ss_pred ECcccccceeeecCCCceEEEEeCCCCCeEEEEECC-------------CEEEEEechHhh---ccccccCcc-c----e
Confidence 77 554 2444444 778899999999999887743 388899876531 111100000 0 0
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCc---eEEEE
Q 002194 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSL---ALVYE 473 (954)
Q Consensus 397 ~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~---~l~~~ 473 (954)
....+..++|||||+.+.++ + ...++.+.. ++.....+..+...+..++|+||+. .|+.+
T Consensus 442 ~~~~v~~v~~sp~g~~~~~~-------------~-~~~~~~~~~---~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg 504 (524)
T 2j04_B 442 KSLRLWKWDYSIKDDKYRID-------------S-SYEVYPLTV---NDVSKAKIDAHGINITCTKWNETSAGGKCYAFS 504 (524)
T ss_dssp CCCEEEECBCCSSSCEEEEC-------------C-CCCCCC----------------CCCSCCCEEECCSTTTTTEEEEE
T ss_pred eeeEEEEeccCCCCCeEEcc-------------C-Cceeccccc---CCcceeeecCCCceEEEEECCCCCCccHHHHhh
Confidence 00112467899999844322 1 112222221 3444556677778899999999964 56655
Q ss_pred EeccccceEEEEEcCC
Q 002194 474 SWYKTRRTRTWVISPG 489 (954)
Q Consensus 474 ~~~~~~~~~l~~~d~~ 489 (954)
...+ ..+||.++..
T Consensus 505 ~~~g--~vrlw~l~~~ 518 (524)
T 2j04_B 505 NSAG--LLTLEYLSLE 518 (524)
T ss_dssp CTTS--EEEEEECSCC
T ss_pred ccCc--eEEEEEcccc
Confidence 4333 2677776543
No 377
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.09 E-value=1.2e-07 Score=107.88 Aligned_cols=314 Identities=11% Similarity=0.024 Sum_probs=177.2
Q ss_pred eecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCcccce
Q 002194 115 SFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFV 194 (954)
Q Consensus 115 ~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~ 194 (954)
.+++||++|+..+.+ +.|.+|++.+ + .....+.+ +...+...
T Consensus 124 ~~~~~g~~l~sg~~d---------------------------------g~i~vwd~~~-~--~~~~~~~~--h~~~v~~~ 165 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDD---------------------------------NTLKVWSAVT-G--KCLRTLVG--HTGGVWSS 165 (445)
T ss_dssp EEEEETTEEEEEETT---------------------------------SCEEEEETTT-C--CEEEECCC--CSSCEEEE
T ss_pred EEEEcCCEEEEEECC---------------------------------CcEEEEECCC-C--cEEEEEcC--CCCCEEEE
Confidence 578889999888775 5799999854 2 22233332 22367777
Q ss_pred eecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCC
Q 002194 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (954)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (954)
.|+ ++.|+... ....|.++|+++++........... +..+.|+ ++.|+...
T Consensus 166 ~~~--~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~--~~~l~s~s------------ 216 (445)
T 2ovr_B 166 QMR--DNIIISGS---------TDRTLKVWNAETGECIHTLYGHTST----VRCMHLH--EKRVVSGS------------ 216 (445)
T ss_dssp EEE--TTEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEEE--TTEEEEEE------------
T ss_pred Eec--CCEEEEEe---------CCCeEEEEECCcCcEEEEECCCCCc----EEEEEec--CCEEEEEe------------
Confidence 887 55666644 2457788888887765444333322 5566674 55566541
Q ss_pred CCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCCcEEEEEee
Q 002194 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYILISSI 351 (954)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~l~~~s~ 351 (954)
....|.++|+ +++. ..+... ..+..+.| ||+.|+..+.
T Consensus 217 -------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 217 -------------------------------------RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp -------------------------------------TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred -------------------------------------CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 2245777787 6643 333333 55666666 8888888774
Q ss_pred cCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccc
Q 002194 352 HRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (954)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~ 430 (954)
+ +.+.+||+.+++. ..+..+. ..+..+.| ||+.++.. +
T Consensus 258 d-------------g~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~~-------------~ 296 (445)
T 2ovr_B 258 D-------------FMVKVWDPETETCLHTLQGHT-------------NRVYSLQF--DGIHVVSG-------------S 296 (445)
T ss_dssp T-------------SCEEEEEGGGTEEEEEECCCS-------------SCEEEEEE--CSSEEEEE-------------E
T ss_pred C-------------CEEEEEECCCCcEeEEecCCC-------------CceEEEEE--CCCEEEEE-------------e
Confidence 3 3899999986543 3333221 23345666 77765554 3
Q ss_pred CCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCC
Q 002194 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (954)
Q Consensus 431 ~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~ 510 (954)
..+.|.+|++ .++.....+..+...+. .++++++.|+..+.++ .|.++|+.++ +...........
T Consensus 297 ~d~~i~i~d~--~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~dg----~i~vwd~~~~--~~~~~~~~~~~~----- 361 (445)
T 2ovr_B 297 LDTSIRVWDV--ETGNCIHTLTGHQSLTS--GMELKDNILVSGNADS----TVKIWDIKTG--QCLQTLQGPNKH----- 361 (445)
T ss_dssp TTSCEEEEET--TTCCEEEEECCCCSCEE--EEEEETTEEEEEETTS----CEEEEETTTC--CEEEEECSTTSC-----
T ss_pred CCCeEEEEEC--CCCCEEEEEcCCcccEE--EEEEeCCEEEEEeCCC----eEEEEECCCC--cEEEEEccCCCC-----
Confidence 3557899996 23333334444443333 3445677777665443 3555666654 223322221100
Q ss_pred CCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEec-cCcccccceeEEeccCCccc
Q 002194 511 GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE-SDKEKYYETTVALMSDQTEG 589 (954)
Q Consensus 511 ~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 589 (954)
..+......++++++... ....|++||+.+++...... .........+. ..
T Consensus 362 ~~~v~~~~~~~~~l~s~~---------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~-------~~ 413 (445)
T 2ovr_B 362 QSAVTCLQFNKNFVITSS---------------------DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW-------RI 413 (445)
T ss_dssp SSCEEEEEECSSEEEEEE---------------------TTSEEEEEETTTCCEEEEEEECTTGGGTCEEE-------EE
T ss_pred CCCEEEEEECCCEEEEEe---------------------CCCeEEEEECCCCceeeeeeccccCCCCceEE-------EE
Confidence 111123344566666655 12359999999887654431 11000001111 24
Q ss_pred cccccCCEEEEEEecCCCCceEEEEECCC
Q 002194 590 DLYLNQLKILTSKESKTENTQYYIQSWPD 618 (954)
Q Consensus 590 ~~s~dg~~l~~~~~s~~~p~~l~~~~~~~ 618 (954)
+|+|++..++...........++++|...
T Consensus 414 ~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 414 RASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 68898877666655555577888888654
No 378
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.09 E-value=1.2e-08 Score=111.94 Aligned_cols=166 Identities=9% Similarity=0.043 Sum_probs=102.0
Q ss_pred ceEEEEEe-CCc-eeEcCCC--ccccccccCC--CCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCc
Q 002194 314 TQLVLVSL-DGT-VKEIGPP--AVYTSLDPSP--DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLA 387 (954)
Q Consensus 314 ~~l~~~~~-~G~-~~~l~~~--~~~~~~~~Sp--DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~ 387 (954)
..+..+++ +++ .+.+... ..+..++|+| +|++++..+.+ +.+.+||+.+++...+.....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-------------g~i~~wd~~~~~~~~~~~~~~- 169 (343)
T 3lrv_A 104 NQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR-------------GTIGFQSYEDDSQYIVHSAKS- 169 (343)
T ss_dssp TEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT-------------CCEEEEESSSSCEEEEECCCS-
T ss_pred CceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-------------CcEEEEECCCCcEEEEEecCC-
Confidence 34556676 554 3333322 5678899999 99999988743 389999999766543332111
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEee-cccccCceeecc
Q 002194 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHK-LDLRYGGISWCD 465 (954)
Q Consensus 388 ~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~-~~~~~~~~~~sp 465 (954)
...+..++|+|||+.++.. +..+.|.+|++ .++... ..+.. +...+..++|+|
T Consensus 170 ----------~~~i~~~~~~pdg~~lasg-------------~~dg~i~iwd~--~~~~~~~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 170 ----------DVEYSSGVLHKDSLLLALY-------------SPDGILDVYNL--SSPDQASSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp ----------SCCCCEEEECTTSCEEEEE-------------CTTSCEEEEES--SCTTSCCEECCCCTTSCEEEEEECT
T ss_pred ----------CCceEEEEECCCCCEEEEE-------------cCCCEEEEEEC--CCCCCCccEEeccCCCCEEEEEEeC
Confidence 1235678999999866554 34568999996 333333 45555 677888999999
Q ss_pred CCceEEEEEeccccceEEEEEcCCCCCCCcEEEec--CCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD--RSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
||+.|+..+ ++ ..+| +|+..+. ....+.. .+...+. ...++|+|+|++|+...
T Consensus 225 ~g~~l~s~~-~~--~v~i--wd~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 225 NGYWMVVEC-DQ--TVVC--FDLRKDV-GTLAYPTYTIPEFKTG----TVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TSSEEEEEE-SS--BEEE--EETTSST-TCBSSCCCBC-----C----CEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEe-CC--eEEE--EEcCCCC-cceeeccccccccccc----ceEEEECCCCCEEEEec
Confidence 999999887 32 2444 4555431 1111110 0000000 01278999999998765
No 379
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.08 E-value=1.7e-08 Score=107.92 Aligned_cols=246 Identities=10% Similarity=-0.013 Sum_probs=144.1
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
....|+|+|||+.|+++.. ....|++++.+++ .+.+...... +..++++|||++++...
T Consensus 29 ~~eg~~~d~~g~~l~~~~~--------~~~~i~~~~~~~~-~~~~~~~~~~-----~~~l~~~~dg~l~v~~~------- 87 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDV--------RQNRTWAWSDDGQ-LSPEMHPSHH-----QNGHCLNKQGHLIACSH------- 87 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEG--------GGTEEEEEETTSC-EEEEESSCSS-----EEEEEECTTCCEEEEET-------
T ss_pred cccCCeEeCCCCEEEEEeC--------CCCEEEEEECCCC-eEEEECCCCC-----cceeeECCCCcEEEEec-------
Confidence 4567999999998888653 2468999999988 5555432221 55788999999665430
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC------ccccccccCCC
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPD 342 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~------~~~~~~~~SpD 342 (954)
+...|++++. +|+.+.+... .....++++||
T Consensus 88 ------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 88 ------------------------------------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp ------------------------------------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT
T ss_pred ------------------------------------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC
Confidence 2245888888 7876655332 23457899999
Q ss_pred CcEEEEEeecCC---cc-cccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002194 343 EKYILISSIHRP---YS-FIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (954)
Q Consensus 343 Gk~l~~~s~~~~---~~-~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~ 418 (954)
|+.++..+.... .. ...........|+.++.+ +..+.+.... ..+..++|+|||+.+ +. +
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~gi~~s~dg~~l-v~-~ 189 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------VKPNGLAFLPSGNLL-VS-D 189 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------SSEEEEEECTTSCEE-EE-E
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------CCCccEEECCCCCEE-EE-e
Confidence 985543221000 00 000000012367777766 4444433211 223568999999976 43 1
Q ss_pred eccCCCccccccCCCeEEEEecCCCCCCCc----eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCC
Q 002194 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGP----EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA 494 (954)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~----~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~ 494 (954)
...+.|+++++ ...++. +.+......+.++++++||+ |+.+. . ..|++++.++.
T Consensus 190 -----------~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~---~~v~~~~~~g~--- 247 (296)
T 3e5z_A 190 -----------TGDNATHRYCL--NARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--G---DGVHVLTPDGD--- 247 (296)
T ss_dssp -----------TTTTEEEEEEE--CSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--T---TEEEEECTTSC---
T ss_pred -----------CCCCeEEEEEE--CCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--C---CeEEEECCCCC---
Confidence 22457889886 223333 22211233456799999997 44443 2 35889998752
Q ss_pred cEEEecCCCCCccCCCCCCCeee-ccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeE
Q 002194 495 PRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (954)
Q Consensus 495 ~~~l~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 565 (954)
.......+.. +.. +.| +|||+.|+.... ..|+.+++++++.+
T Consensus 248 ~~~~~~~~~~-~~~------~~f~~~d~~~L~v~t~----------------------~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 248 ELGRVLTPQT-TSN------LCFGGPEGRTLYMTVS----------------------TEFWSIETNVRGLE 290 (296)
T ss_dssp EEEEEECSSC-CCE------EEEESTTSCEEEEEET----------------------TEEEEEECSCCBCC
T ss_pred EEEEEECCCC-cee------EEEECCCCCEEEEEcC----------------------CeEEEEEccccccc
Confidence 2222222211 222 677 688888877651 24999999877654
No 380
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.08 E-value=2.2e-10 Score=132.01 Aligned_cols=211 Identities=15% Similarity=0.050 Sum_probs=129.2
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHH-HHCCcEEEEcCCC-CC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW-LARGFAILGGPTT-PI 723 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~G~~V~~~~~~-~~ 723 (954)
+.|. +...+|.|++.... .++|+||++|||.+..+.. ..+.. ..... ..+|++|+..+|+ +.
T Consensus 82 ~edc--l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~~----~~~~~~~~~g~vvv~~nYRlg~ 145 (522)
T 1ukc_A 82 SEDC--LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENSN--------ANYNG----TQVIQASDDVIVFVTFNYRVGA 145 (522)
T ss_dssp ESCC--CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCCS--------CSCCC----HHHHHHTTSCCEEEEECCCCHH
T ss_pred CCcC--CEEEEEECCCCCCC--CCCCEEEEECCCccccCCc--------cccCc----HHHHHhcCCcEEEEEecccccc
Confidence 3455 55678889764332 3489999999997654421 12211 11111 2469999998886 33
Q ss_pred CCCCCcccch--hhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC----CCcccEEEEeccCC
Q 002194 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA----PHLFCCGIARSGAY 794 (954)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~~~~ 794 (954)
.|++...... ..+...+.|+.+|++|++++. ..|+++|.|+|+|+||+++..++... +.+|+++|+.+|.+
T Consensus 146 ~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 146 LGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cccccchhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 3554432211 123567899999999998862 47999999999999999888777653 57899999999875
Q ss_pred CCCCCCCCCccccchhhh-------------cHHHHHhcCccc---------ccCCCCCC--EEEEEeCCCCCCCCchHH
Q 002194 795 NRTLTPFGFQNEDRTLWE-------------ATSTYVEMSPFM---------SANKLKKP--ILLVHGEEDNNSGTLTMQ 850 (954)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~sp~~---------~~~~~~~P--~Lii~G~~D~~v~~~~~~ 850 (954)
...... ......+. ..+.+...++.. .......| .+.++...|..+. +++
T Consensus 226 ~~~~~~----~~~~~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l--~~~ 299 (522)
T 1ukc_A 226 PTQRTV----SEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLV--PDE 299 (522)
T ss_dssp CCCCCS----GGGHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSS--CSC
T ss_pred CCcCCH----HHHHHHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCccc--CCC
Confidence 422111 00000000 011112211111 11112234 5566777787765 677
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCcCC
Q 002194 851 SDRFFNALKGHGALCRLVILPFESHGYA 878 (954)
Q Consensus 851 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 878 (954)
..+++++-+..++++-+-...+++|.+.
T Consensus 300 p~~~~~~g~~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 300 LYNAFDAGNFIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp HHHHHHHTCSCCCCEEEEEETBGGGGTS
T ss_pred HHHHHhcCCCCCCCEEEEeecchhHHhh
Confidence 7777776666677777777889999875
No 381
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.08 E-value=1.7e-08 Score=110.14 Aligned_cols=269 Identities=12% Similarity=0.085 Sum_probs=141.6
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCC-----
Q 002194 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD----- 187 (954)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~----- 187 (954)
.+++||||++|..... +.+.. .+....+.|.++|..+ + .....|. .+.
T Consensus 82 ~va~spDG~~lyVan~--------------------~~~r~---~~G~~~~~VsviD~~t-~--~v~~~I~-v~~g~r~~ 134 (386)
T 3sjl_D 82 NPVVADDGSFIAHAST--------------------VFSRI---ARGERTDYVEVFDPVT-L--LPTADIE-LPDAPRFL 134 (386)
T ss_dssp EEEECTTSSCEEEEEE--------------------EEEET---TEEEEEEEEEEECTTT-C--CEEEEEE-ETTCCCCC
T ss_pred cEEECCCCCEEEEEcc--------------------ccccc---ccCCCCCEEEEEECCC-C--eEEEEEE-CCCccccc
Confidence 5999999999876643 00000 0011114578887743 1 1122232 111
Q ss_pred -CCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc--cccc-cceeEecCCeEEEEEec
Q 002194 188 -GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL--NAIF-DNFVWVNNSTLLVCTIP 263 (954)
Q Consensus 188 -~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~--~~~~-~~~~wspDG~~l~~~~~ 263 (954)
+.......+||||++|+.... .....|.++|+.+++...-...++... .... ..+..++||+++++...
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~-------~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQF-------SPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEEC-------SSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred cCCCCceEEEcCCCCEEEEEEc-------CCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECC
Confidence 225667899999999887642 225689999999987654433332100 0000 12356677777666511
Q ss_pred CCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC--cccccccc-
Q 002194 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVYTSLDP- 339 (954)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~--~~~~~~~~- 339 (954)
.. ..+ .+. + ..+... .....+.|
T Consensus 208 ~~------------------------------------------------g~v--~~~~~---~~~~~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 208 TE------------------------------------------------GTP--EITHT---EVFHPEDEFLINHPAYS 234 (386)
T ss_dssp SS------------------------------------------------SCC--EEEEC---CCCSCTTSCBCSCCEEE
T ss_pred CC------------------------------------------------CeE--EEeec---ceeccccccccccceeE
Confidence 00 001 000 1 001111 11223455
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~ 419 (954)
.+||+ ++|.+. .+++++.|+.+...+.+............-.....+...++++||++++++....
T Consensus 235 ~~dG~-~~~vs~-------------~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~ 300 (386)
T 3sjl_D 235 QKAGR-LVWPTY-------------TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 300 (386)
T ss_dssp TTTTE-EEEEBT-------------TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred cCCCc-EEEEeC-------------CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecc
Confidence 47885 555653 2389999998765433322210000000000112344567889999987776432
Q ss_pred ccCCCccccccCCCeEEEEecCCCCCCCc-eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
...+. .-...+.|+++|+ .+.+. +.+. ......++++|+||+.++|..+... ..|.++|..++
T Consensus 301 ~~~~~---hk~~~~~V~viD~---~t~kv~~~i~-vg~~~~~lavs~D~~~~ly~tn~~~--~~VsViD~~t~ 364 (386)
T 3sjl_D 301 RDEWR---HKTASRFVVVLDA---KTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGD--KTLYIHDAESG 364 (386)
T ss_dssp CCTTC---TTSCEEEEEEEET---TTCCEEEEEE-EEEEECEEEECSSSSCEEEEEETTT--TEEEEEETTTC
T ss_pred ccccc---cCCCCCEEEEEEC---CCCeEEEEEE-CCCCcceEEECCCCCeEEEEEcCCC--CeEEEEECCCC
Confidence 21110 0022358999996 44444 3333 2335678999999987777766543 46899999886
No 382
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.08 E-value=7.1e-09 Score=114.24 Aligned_cols=113 Identities=12% Similarity=0.195 Sum_probs=78.0
Q ss_pred CcccceeecCC---CCeEEEEEeeccccCCCCceEEEEEECCC-Ccee--ecccCCCccccccccceeEecCCeEEEEEe
Q 002194 189 AKLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKAR--PLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (954)
Q Consensus 189 ~~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~~~l~~~d~~~-g~~~--~lt~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (954)
..+..++|+|| |+.|+... . ...|.++++++ +... .+...... +..+.|+|||+.|+...
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~-------~--dg~i~iw~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGS-------W--ANDVRCWEVQDSGQTIPKAQQMHTGP-----VLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEE-------T--TSEEEEEEECTTSCEEEEEEEECSSC-----EEEEEECTTSSEEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEEC-------C--CCcEEEEEcCCCCceeEEEeccccCC-----EEEEEECcCCCEEEEEc
Confidence 47899999999 58777754 2 34566666665 3332 23222222 77899999999998761
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC-cccccccc-
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDP- 339 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~- 339 (954)
....|.++++ +++...+... ..+..+.|
T Consensus 106 -------------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 106 -------------------------------------------------CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWI 136 (368)
T ss_dssp -------------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEEEEEEE
T ss_pred -------------------------------------------------CCCcEEEEEcCCCCceeeccccCceEEEEEE
Confidence 1235777788 7765555444 77888999
Q ss_pred -CCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce
Q 002194 340 -SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF 377 (954)
Q Consensus 340 -SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~ 377 (954)
+|||+.|+..+.+ +.+.+||+..++
T Consensus 137 ~~~~~~~l~~~~~d-------------g~i~vwd~~~~~ 162 (368)
T 3mmy_A 137 KAPNYSCVMTGSWD-------------KTLKFWDTRSSN 162 (368)
T ss_dssp ECSSCEEEEEEETT-------------SEEEEECSSCSS
T ss_pred eCCCCCEEEEccCC-------------CcEEEEECCCCc
Confidence 9999999888743 389999998543
No 383
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.07 E-value=2.7e-08 Score=110.62 Aligned_cols=274 Identities=11% Similarity=0.017 Sum_probs=146.7
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccc-cCCCCceEEEEEECCCCceeecccCC-Ccc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSP-DIY 241 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~-~~~~~~~~l~~~d~~~g~~~~lt~~~-~~~ 241 (954)
.|.++|+.+ .+ .+..++.+... .+.+||||++|+.+...... ..+.....|.++|+.+++...-...+ ...
T Consensus 100 ~VsVID~~t----~~--vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 100 QQFVIDGST----GR--ILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEETTT----TE--EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC
T ss_pred eEEEEECCC----CE--EEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc
Confidence 688888743 22 22223333344 89999999998887631100 00112468999999988765432222 000
Q ss_pred c--cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEE
Q 002194 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (954)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~ 319 (954)
+ ......+.++|||+++|++.. . ....|.++
T Consensus 173 ~~~g~~P~~~~~spDGk~lyV~n~---------------------~--------------------------~~~~VsVI 205 (426)
T 3c75_H 173 FLVGTYQWMNALTPDNKNLLFYQF---------------------S--------------------------PAPAVGVV 205 (426)
T ss_dssp CCBSCCGGGSEECTTSSEEEEEEC---------------------S--------------------------SSCEEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEec---------------------C--------------------------CCCeEEEE
Confidence 0 001347899999999998710 0 12357788
Q ss_pred Ee-CCce-eEcCCCcc--------ccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEE-Eec-cCCCc
Q 002194 320 SL-DGTV-KEIGPPAV--------YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELC-DLPLA 387 (954)
Q Consensus 320 ~~-~G~~-~~l~~~~~--------~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~-~~~~~ 387 (954)
|+ +++. ..+.-++. ..-+++++||+.+++.. ..+++. ..+ ....
T Consensus 206 D~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-----------------------~~~~v~~~~~~~~~v- 261 (426)
T 3c75_H 206 DLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDF-----------------------ADGETKVTNTEVFHT- 261 (426)
T ss_dssp ETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEEC-----------------------CTTCCEEEECCCCSC-
T ss_pred ECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEEC-----------------------CCCcEEEEeeeeecc-
Confidence 88 6643 33332211 01134455555444433 211111 111 0000
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-------------
Q 002194 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL------------- 454 (954)
Q Consensus 388 ~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~------------- 454 (954)
...|. ...+.|++||+.++|. ...+.++++|. .++....+...
T Consensus 262 ~~~p~--------~~~~~~~~dg~~~~~~-------------s~~g~V~ViD~---~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 262 EDELL--------INHPAFSLRSGRLVWP-------------TYTGKIFQADL---TAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TTSCB--------CSCCEECTTTCEEEEE-------------BTTSEEEEEEE---CSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCce--------eeEeeecCCCCEEEEE-------------eCCCcEEEEec---cCCceEEeeeeeeccccccccccc
Confidence 00111 1235689999887776 22347888885 44433322110
Q ss_pred ccccCceeeccCCceEEEEEecc------ccceEEEEEcCCCCCCCcEEE-ecCCCCCccCCCCCCCeeeccCCcEEEEE
Q 002194 455 DLRYGGISWCDDSLALVYESWYK------TRRTRTWVISPGSKDVAPRIL-FDRSSEDVYSDPGSPMMRRTSTGTYVIAK 527 (954)
Q Consensus 455 ~~~~~~~~~spDg~~l~~~~~~~------~~~~~l~~~d~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 527 (954)
......++++|||++++...... .....|+++|+.+... ...+ .... ..+ +.|+|||+.++|.
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv-v~~I~vg~~---P~g------ia~spDg~~~lyv 387 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER-INKIELGHE---IDS------INVSQDAEPLLYA 387 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEEEEE---ECE------EEECCSSSCEEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE-EEEEECCCC---cCe------EEEccCCCEEEEE
Confidence 11122378999999887764321 1135799999998631 1112 1111 112 7899999955555
Q ss_pred EeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEe
Q 002194 528 IKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (954)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 568 (954)
.+. ....|.++|+++++...-.
T Consensus 388 ~n~-------------------~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 388 LSA-------------------GTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EET-------------------TTTEEEEEETTTCCEEEEE
T ss_pred EcC-------------------CCCeEEEEECCCCCEEEEe
Confidence 521 1235999999999876443
No 384
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=9.9e-09 Score=111.61 Aligned_cols=233 Identities=12% Similarity=0.046 Sum_probs=140.8
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCccc
Q 002194 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (954)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~ 192 (954)
.+.|+||++.++++... . ..|++++..+ +..+.+. .+ ..+.
T Consensus 53 gp~~~~~~~~l~~~d~~----------------------~----------~~i~~~d~~~----~~~~~~~-~~--~~v~ 93 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNIL----------------------E----------RELHELHLAS----GRKTVHA-LP--FMGS 93 (326)
T ss_dssp EEEEETTTTEEEEEEGG----------------------G----------TEEEEEETTT----TEEEEEE-CS--SCEE
T ss_pred CCeEeCCCCEEEEEECC----------------------C----------CEEEEEECCC----CcEEEEE-CC--Ccce
Confidence 68999999888887542 0 3688888743 4433333 22 3577
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCC
Q 002194 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (954)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (954)
.+.|+|||+.++.. ...|+++|.++++.+.+...........+..+.++|||++.+..... .
T Consensus 94 ~i~~~~dg~l~v~~-----------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-~------ 155 (326)
T 2ghs_A 94 ALAKISDSKQLIAS-----------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGR-K------ 155 (326)
T ss_dssp EEEEEETTEEEEEE-----------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEET-T------
T ss_pred EEEEeCCCeEEEEE-----------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC-c------
Confidence 78999999866553 12499999998887766543221101125578899999854432100 0
Q ss_pred CCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCCC-ccccccccCCCCcEEEEEee
Q 002194 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSI 351 (954)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~ 351 (954)
. + .....||+++ +|+.+.+... .....++|||||+.|++...
T Consensus 156 -----------------------------~-~------~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 156 -----------------------------A-E------TGAGSIYHVA-KGKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp -----------------------------C-C------TTCEEEEEEE-TTEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred -----------------------------C-C------CCceEEEEEe-CCcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 0 0 0234688888 7876665443 44567899999999988753
Q ss_pred cCCcccccccCCCCcceEEEecc--Cc-eE---EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002194 352 HRPYSFIVPCGRFPRQVGVWTTD--GI-FV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (954)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~l~d~~--g~-~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~ 425 (954)
. ...|++++++ ++ .. +.+...... ...+..+.+.+||. +++. ..
T Consensus 199 ~------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~----------~~~p~gi~~d~~G~-lwva-~~------ 248 (326)
T 2ghs_A 199 K------------VNRLMRVPLDARTGLPTGKAEVFIDSTGI----------KGGMDGSVCDAEGH-IWNA-RW------ 248 (326)
T ss_dssp T------------TCEEEEEEBCTTTCCBSSCCEEEEECTTS----------SSEEEEEEECTTSC-EEEE-EE------
T ss_pred C------------CCEEEEEEcccccCCcccCceEEEECCCC----------CCCCCeeEECCCCC-EEEE-Ee------
Confidence 2 2378999975 33 21 122111100 01234678888885 2222 11
Q ss_pred cccccCCCeEEEEecCCCCCCCceEEeecccccCceeec-cCCceEEEEEecc
Q 002194 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWC-DDSLALVYESWYK 477 (954)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~s-pDg~~l~~~~~~~ 477 (954)
..+.|++++. ++...+.+......+..++|+ ||++.|++.....
T Consensus 249 -----~~~~v~~~d~---~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 249 -----GEGAVDRYDT---DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -----TTTEEEEECT---TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -----CCCEEEEECC---CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 1347888884 554444554444456788998 8998887776543
No 385
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.04 E-value=3.6e-09 Score=118.52 Aligned_cols=51 Identities=12% Similarity=0.109 Sum_probs=36.8
Q ss_pred CCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEE
Q 002194 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 431 ~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (954)
..+.|++|++ ..+.....+..+...+..++|||||+.|+.++..+ ..||++
T Consensus 337 ~Dg~V~lwd~--~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G---v~lvrL 387 (393)
T 4gq1_A 337 QHGLIQLINT--YEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS---VLLTRL 387 (393)
T ss_dssp TTTEEEEEET--TCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE---EEEEEE
T ss_pred CCCEEEEEEC--CCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC---eEEEEE
Confidence 3568999996 34445556667777889999999999999886432 445544
No 386
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.03 E-value=3.3e-09 Score=109.39 Aligned_cols=145 Identities=10% Similarity=0.073 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-----CCcccEEEEeccCCCCCCCCCCCccccchh
Q 002194 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-----PHLFCCGIARSGAYNRTLTPFGFQNEDRTL 810 (954)
Q Consensus 736 ~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~ 810 (954)
.....+++.+++++|.++..+ +++.++||||||.++..++.++ +++++.+|++++.++....... .....
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~~--~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~---~~~~~ 151 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYHF--NHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTT---AKTSM 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC--SEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSS---CCCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCC--CCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccccc---ccCHH
Confidence 456678899999999887433 6899999999999999998876 6789999999887653321110 00011
Q ss_pred hhcHHHHHhcCcccccCCCCCCEEEEEeC----CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeC--CCCCcCCCcccHH
Q 002194 811 WEATSTYVEMSPFMSANKLKKPILLVHGE----EDNNSGTLTMQSDRFFNALKGHGALCRLVILP--FESHGYAARESIM 884 (954)
Q Consensus 811 ~~~~~~~~~~sp~~~~~~~~~P~Lii~G~----~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~H~~~~~~~~~ 884 (954)
+ ..+... ...+.+ ++|+|+|+|+ .|..|| ...++.+...++......+.+.+. +++|... .++ .
T Consensus 152 ~---~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp--~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l-~e~-~ 221 (250)
T 3lp5_A 152 F---KELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVP--YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDL-PQN-K 221 (250)
T ss_dssp H---HHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCC--HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCH-HHH-H
T ss_pred H---HHHHhc--cccCCC-CceEEEEEecCCCCCCceee--HHHHHHHHHHhcccccceEEEEEeCCCCchhcc-hhC-H
Confidence 1 111111 111222 6899999999 999998 887777766665544445555555 4669874 333 3
Q ss_pred HHHHHHHHHHH
Q 002194 885 HVLWETDRWLQ 895 (954)
Q Consensus 885 ~~~~~i~~fl~ 895 (954)
.+.+.|.+||.
T Consensus 222 ~v~~~I~~FL~ 232 (250)
T 3lp5_A 222 QIVSLIRQYLL 232 (250)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHh
Confidence 56666666664
No 387
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.01 E-value=2.4e-09 Score=112.73 Aligned_cols=197 Identities=12% Similarity=0.090 Sum_probs=111.1
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (954)
.|.||++||+.... ..|.. +.. ++.+|.|+..+. .|++.+...........+|+.+.++.
T Consensus 21 ~~~lv~lhg~~~~~-----------~~~~~----~~~--l~~~~~v~~~d~---~G~~~~~~~~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 21 RKTLFMLPDGGGSA-----------FSYAS----LPR--LKSDTAVVGLNC---PYARDPENMNCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SEEEEEECCTTCCG-----------GGGTT----SCC--CSSSEEEEEEEC---TTTTCGGGCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCH-----------HHHHH----HHh--cCCCCEEEEEEC---CCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 57889999974221 11221 122 367899999444 45554444333456666666666655
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHH---hCCCcccEEEEeccCCCCCCCCC--------------CC-------cc
Q 002194 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLA---HAPHLFCCGIARSGAYNRTLTPF--------------GF-------QN 805 (954)
Q Consensus 750 l~~~~~~d~~ri~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~~~~~~~~~~~--------------~~-------~~ 805 (954)
+. ...++.++||||||.+|+.++. ..|++++++|.+++......... +. ..
T Consensus 81 ~~-----~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
T 3ils_A 81 RQ-----PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGS 155 (265)
T ss_dssp HC-----SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSC
T ss_pred hC-----CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCC
Confidence 42 2248999999999999999998 67788999998876432111110 00 00
Q ss_pred ccchhh------hcHHHHHhcCcccccCCCCCCEE-EEEeCC---CCCCCC------------chHHHHHHHHHHHhCCC
Q 002194 806 EDRTLW------EATSTYVEMSPFMSANKLKKPIL-LVHGEE---DNNSGT------------LTMQSDRFFNALKGHGA 863 (954)
Q Consensus 806 ~~~~~~------~~~~~~~~~sp~~~~~~~~~P~L-ii~G~~---D~~v~~------------~~~~~~~~~~~l~~~g~ 863 (954)
.....+ .+......+.+ ....++++|++ +++|++ |..++. .......+.+.+ .+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~--~~~ 232 (265)
T 3ils_A 156 TEPPSYLIPHFTAVVDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIM--PGA 232 (265)
T ss_dssp SCCCTTHHHHHHHHHHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHS--TTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhC--Ccc
Confidence 000000 00011111111 12346789987 999999 988720 022223332222 124
Q ss_pred cEEEEEeCCCCCcCCC-cccHHHHHHHHHHHH
Q 002194 864 LCRLVILPFESHGYAA-RESIMHVLWETDRWL 894 (954)
Q Consensus 864 ~~~~~~~~~~~H~~~~-~~~~~~~~~~i~~fl 894 (954)
++++++++|+||.+.. .+....+.+.|.+||
T Consensus 233 ~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 233 SFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp CEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred ceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 6899999999998641 344555555555554
No 388
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=1.8e-08 Score=108.46 Aligned_cols=252 Identities=10% Similarity=0.018 Sum_probs=144.9
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCc
Q 002194 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (954)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~ 190 (954)
...+.|+|||+.|+|+... . ..|+.|+. +| ..+.+.. ....
T Consensus 47 ~egp~~~~~g~~l~~~d~~----------------------~----------~~i~~~~~--~g---~~~~~~~--~~~~ 87 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLV----------------------G----------RRVLGWRE--DG---TVDVLLD--ATAF 87 (305)
T ss_dssp EEEEEEEGGGTEEEEEETT----------------------T----------TEEEEEET--TS---CEEEEEE--SCSC
T ss_pred ccCCeEeCCCCEEEEEECC----------------------C----------CEEEEEeC--CC---CEEEEeC--CCCc
Confidence 3478999999999888652 1 25777775 33 3333432 1235
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
...+.|+|||+.++. . .+...|++++.+ |+.+.+...........+..++++|||+ |+++-+. .+.
T Consensus 88 ~~gl~~d~dG~l~v~-~--------~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~-~g~-- 153 (305)
T 3dr2_A 88 TNGNAVDAQQRLVHC-E--------HGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPP-FGL-- 153 (305)
T ss_dssp EEEEEECTTSCEEEE-E--------TTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCS-GGG--
T ss_pred cceeeECCCCCEEEE-E--------CCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcC-CCc--
Confidence 677899999985444 2 124589999987 5555554321111111245789999997 4443100 000
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccc-cccccccceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEE
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDED-LFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYIL 347 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~-~~~~~~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~ 347 (954)
.....+. ...-.....||+++. +|+.+.+. . .....++|||||+.|+
T Consensus 154 -----------------------------~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 154 -----------------------------RKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLY 203 (305)
T ss_dssp -----------------------------SCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEE
T ss_pred -----------------------------cccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEE
Confidence 0000000 000002356999998 78777666 5 4556789999999988
Q ss_pred EEeecCCcccccccCCCCcceEEEeccCceEE---EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR---ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 348 ~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~---~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
+...... ......|++++++++... .+.... ...+..+.+.+||+ | +.
T Consensus 204 v~~~~~~-------~~~~~~i~~~~~~~~~l~~~~~~~~~~------------~~~pdgi~~d~~G~-l-wv-------- 254 (305)
T 3dr2_A 204 VSQTPEQ-------GHGSVEITAFAWRDGALHDRRHFASVP------------DGLPDGFCVDRGGW-L-WS-------- 254 (305)
T ss_dssp EEECCC----------CCCEEEEEEEETTEEEEEEEEECCS------------SSCCCSEEECTTSC-E-EE--------
T ss_pred EEecCCc-------CCCCCEEEEEEecCCCccCCeEEEECC------------CCCCCeEEECCCCC-E-EE--------
Confidence 7763310 001237899998854321 111110 02234688999997 2 32
Q ss_pred ccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
...+.|++++. ++.....+.... .+..++|+||++.|+.++.. .||.+++
T Consensus 255 -----~~~~gv~~~~~---~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 255 -----SSGTGVCVFDS---DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp -----CCSSEEEEECT---TSCEEEEEECSS-CCCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred -----ecCCcEEEECC---CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 11335888884 555444554333 47789999999988887542 4777654
No 389
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.00 E-value=2.7e-08 Score=106.61 Aligned_cols=239 Identities=13% Similarity=0.024 Sum_probs=141.1
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCccc
Q 002194 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (954)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~ 192 (954)
.+.|+|+++.|.++... . ..|+.++..+ +..+.+. . ...+.
T Consensus 17 gp~w~~~~~~l~~~d~~----------------------~----------~~i~~~d~~~----~~~~~~~-~--~~~~~ 57 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIP----------------------A----------KKVCRWDSFT----KQVQRVT-M--DAPVS 57 (297)
T ss_dssp EEEEETTTTEEEEEETT----------------------T----------TEEEEEETTT----CCEEEEE-C--SSCEE
T ss_pred CCeEECCCCEEEEEECC----------------------C----------CEEEEEECCC----CcEEEEe-C--CCceE
Confidence 68999998888887542 0 3678888743 3333332 2 23577
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCC
Q 002194 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (954)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (954)
.++|+|||+ |+... ...|+++|.++++.+.+.......-...+..++++|||++.+.........
T Consensus 58 ~i~~~~dG~-l~v~~----------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~---- 122 (297)
T 3g4e_A 58 SVALRQSGG-YVATI----------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP---- 122 (297)
T ss_dssp EEEEBTTSS-EEEEE----------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT----
T ss_pred EEEECCCCC-EEEEE----------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc----
Confidence 889999999 43332 347999999988877665432211111245788999998444331100000
Q ss_pred CCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCCC-ccccccccCCCCcEEEEEee
Q 002194 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSI 351 (954)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~ 351 (954)
.... .....||+++.+|....+... .....++|||||+.|++...
T Consensus 123 --------------------------~~~~--------~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 123 --------------------------AVLE--------RHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp --------------------------TBCC--------TTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred --------------------------cccc--------CCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecC
Confidence 0000 023468888876665555444 45567899999999887763
Q ss_pred cCCcccccccCCCCcceEEEecc--CceE---EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 352 HRPYSFIVPCGRFPRQVGVWTTD--GIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~l~d~~--g~~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
.. ..|++++++ ++.. +.+...... ...+..+++.+||+ |++. ..
T Consensus 169 ~~------------~~i~~~~~d~~~G~~~~~~~~~~~~~~----------~~~p~g~~~d~~G~-lwva-~~------- 217 (297)
T 3g4e_A 169 LS------------YSVDAFDYDLQTGQISNRRSVYKLEKE----------EQIPDGMCIDAEGK-LWVA-CY------- 217 (297)
T ss_dssp GG------------TEEEEEEECTTTCCEEEEEEEEECCGG----------GCEEEEEEEBTTSC-EEEE-EE-------
T ss_pred CC------------CcEEEEeccCCCCcccCcEEEEECCCC----------CCCCCeeEECCCCC-EEEE-Ec-------
Confidence 32 278888874 3322 222221110 12335688999995 3222 11
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEeecccccCceeec-cCCceEEEEEec
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWC-DDSLALVYESWY 476 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~s-pDg~~l~~~~~~ 476 (954)
..+.|++++. .+|.....+......+..++|+ ||++.|+.++..
T Consensus 218 ----~~~~v~~~d~--~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 218 ----NGGRVIRLDP--VTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ----TTTEEEEECT--TTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred ----CCCEEEEEcC--CCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 2346888884 2243334444444567789998 899988887654
No 390
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=98.98 E-value=7.4e-09 Score=115.49 Aligned_cols=212 Identities=11% Similarity=0.021 Sum_probs=125.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH------CCcEEEEcCCC
Q 002194 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA------RGFAILGGPTT 721 (954)
Q Consensus 648 ~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~------~G~~V~~~~~~ 721 (954)
+|.+|+.....++. ...|.||++||++.... .| ......|++ .||.|++ .
T Consensus 93 ~g~~i~~~~~~~~~------~~~~pllllHG~~~s~~-----------~~----~~~~~~L~~~~~~~~~gf~vv~---~ 148 (408)
T 3g02_A 93 EGLTIHFAALFSER------EDAVPIALLHGWPGSFV-----------EF----YPILQLFREEYTPETLPFHLVV---P 148 (408)
T ss_dssp TTEEEEEEEECCSC------TTCEEEEEECCSSCCGG-----------GG----HHHHHHHHHHCCTTTCCEEEEE---E
T ss_pred CCEEEEEEEecCCC------CCCCeEEEECCCCCcHH-----------HH----HHHHHHHhcccccccCceEEEE---E
Confidence 89999988876532 12567899999752211 11 134455666 5899999 6
Q ss_pred CCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCC
Q 002194 722 PIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPS-KIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (954)
Q Consensus 722 ~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~-ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (954)
+..|+|.+.... .......+|+.+.++.| ..+ ++.++||||||.+++.++.++|+++...+.+++....
T Consensus 149 DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~l------g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~ 222 (408)
T 3g02_A 149 SLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDL------GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAP 222 (408)
T ss_dssp CCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHT------TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCC
Confidence 667888875532 12334444444444332 234 8999999999999999999997765555554443221
Q ss_pred CCCC--CCCcccc---------------c-------------------------------hhhhc-----H---------
Q 002194 797 TLTP--FGFQNED---------------R-------------------------------TLWEA-----T--------- 814 (954)
Q Consensus 797 ~~~~--~~~~~~~---------------~-------------------------------~~~~~-----~--------- 814 (954)
.... ..+.... . ..|.+ .
T Consensus 223 ~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y 302 (408)
T 3g02_A 223 PEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLY 302 (408)
T ss_dssp TTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHH
Confidence 1000 0000000 0 00000 0
Q ss_pred ----------HHHHhc-Cc--cc-------ccCCCCCCEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 002194 815 ----------STYVEM-SP--FM-------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFES 874 (954)
Q Consensus 815 ----------~~~~~~-sp--~~-------~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 874 (954)
..|.+. .. .. ...++++|+++++|..|...+ +.. +.+.. ...+.+..++++|
T Consensus 303 ~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~--p~~---~~~~~---~~~~~~~~~~~gG 374 (408)
T 3g02_A 303 WLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPV--PRS---WIATT---GNLVFFRDHAEGG 374 (408)
T ss_dssp HHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCC--CHH---HHGGG---EEEEEEEECSSCB
T ss_pred HhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccC--cHH---HHHhc---CCeeEEEECCCCc
Confidence 000000 00 00 234567899999999997654 432 22222 2237788999999
Q ss_pred CcCCCcccHHHHHHHHHHHHHHhc
Q 002194 875 HGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
|.. ..+..+.+.+.|.+||.+.-
T Consensus 375 Hf~-~lE~Pe~~~~~l~~fl~~~~ 397 (408)
T 3g02_A 375 HFA-ALERPRELKTDLTAFVEQVW 397 (408)
T ss_dssp SCH-HHHCHHHHHHHHHHHHHHHC
T ss_pred Cch-hhhCHHHHHHHHHHHHHHHH
Confidence 986 47788899999999998764
No 391
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.97 E-value=1.9e-08 Score=114.21 Aligned_cols=211 Identities=9% Similarity=0.031 Sum_probs=122.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccC--CCCCCc------eee
Q 002194 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFP--DGKLGQ------EIE 181 (954)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~g~~~~------~~~ 181 (954)
.+..++|+|||+.|+..+.+ +.|.+|++.. .+.... .+.
T Consensus 113 ~v~~~~~~~~~~~l~s~s~d---------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKD---------------------------------GQIIVLKVNHYQQESEVKFLNCECIRK 159 (437)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCC---------------------------------CEEEEEEeccccCCceeeccccceeEE
Confidence 56788999999999988876 4678887731 111000 011
Q ss_pred eecCC--CCCccccee--ecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeE
Q 002194 182 IQGFP--DGAKLNFVT--WSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTL 257 (954)
Q Consensus 182 lt~~~--~~~~~~~~~--wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~ 257 (954)
+.-.+ ....+.... |+|||+.|+... ....|.++|+.+++......... ....+..++|+|||+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~ 228 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKSLLVALT---------NLSRVIIFDIRTLERLQIIENSP--RHGAVSSICIDEECCV 228 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCEEEEEEE---------TTSEEEEEETTTCCEEEEEECCG--GGCCEEEEEECTTSCE
T ss_pred EEccCcccccCceEEEEEEcCCCCEEEEEe---------CCCeEEEEeCCCCeeeEEEccCC--CCCceEEEEECCCCCE
Confidence 11001 111222333 778898888755 25688889998877654443310 0112778999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcC-CC-cc
Q 002194 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIG-PP-AV 333 (954)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~-~~-~~ 333 (954)
|+... ....|.++|+ +++. ..+. .. ..
T Consensus 229 l~s~~-------------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (437)
T 3gre_A 229 LILGT-------------------------------------------------TRGIIDIWDIRFNVLIRSWSFGDHAP 259 (437)
T ss_dssp EEEEE-------------------------------------------------TTSCEEEEETTTTEEEEEEBCTTCEE
T ss_pred EEEEc-------------------------------------------------CCCeEEEEEcCCccEEEEEecCCCCc
Confidence 98761 1234677787 6643 3332 22 45
Q ss_pred cccc----ccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcc----cCCc-------cccc-
Q 002194 334 YTSL----DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE----DIPI-------AFNS- 396 (954)
Q Consensus 334 ~~~~----~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~----~~p~-------~~~~- 396 (954)
+..+ .|+|||++|+..+.+ +.|.+||+.+++ .+.+..+.... ..|. .+.+
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSK-------------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTT-------------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCC
T ss_pred eEEEEeccccCCCccEEEEEcCC-------------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccc
Confidence 5555 788899888877633 389999998554 34444322110 0010 0111
Q ss_pred -cccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEec
Q 002194 397 -VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQA 440 (954)
Q Consensus 397 -~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~ 440 (954)
....+..++|+ |++.++.. +..+.|.+|++
T Consensus 327 ~~~~~v~~l~~~-~~~~l~s~-------------~~d~~i~~wd~ 357 (437)
T 3gre_A 327 RSLNALSTISVS-NDKILLTD-------------EATSSIVMFSL 357 (437)
T ss_dssp CSGGGGCCEEEE-TTEEEEEE-------------GGGTEEEEEET
T ss_pred ccCCceEEEEEC-CceEEEec-------------CCCCeEEEEEC
Confidence 23345678888 66544333 34567888886
No 392
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=98.96 E-value=9.2e-10 Score=127.52 Aligned_cols=132 Identities=18% Similarity=0.170 Sum_probs=91.6
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH-HCCcEEEEcCCC-CC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTT-PI 723 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~-~~ 723 (954)
+.|.. ...+|.|+....++ ++|+||++|||++..+... .+.. . .|+ .+|++|+.++|+ +.
T Consensus 95 ~edcl--~lnv~~P~~~~~~~--~~Pv~v~iHGG~~~~g~~~--------~~~~-----~-~la~~~g~vvv~~nYRlg~ 156 (542)
T 2h7c_A 95 SEDCL--YLNIYTPADLTKKN--RLPVMVWIHGGGLMVGAAS--------TYDG-----L-ALAAHENVVVVTIQYRLGI 156 (542)
T ss_dssp ESCCC--EEEEEECSCTTSCC--CEEEEEEECCSTTTSCCST--------TSCC-----H-HHHHHHTCEEEEECCCCHH
T ss_pred CCCCc--EEEEEECCCCCCCC--CCCEEEEECCCcccCCCcc--------ccCH-----H-HHHhcCCEEEEecCCCCcc
Confidence 45664 45688897643323 4999999999976544321 1211 1 344 489999998887 33
Q ss_pred CCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHh--CCCcccEEEEeccCCC
Q 002194 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYN 795 (954)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~~ 795 (954)
.|++............+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++.. .+.+|+++|+.+|...
T Consensus 157 ~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 157 WGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 343322111111234578999999999886 34799999999999999999999886 3578999999998654
No 393
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.95 E-value=2e-09 Score=115.81 Aligned_cols=211 Identities=12% Similarity=-0.059 Sum_probs=120.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002194 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (954)
Q Consensus 648 ~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G 727 (954)
++..+.+.++.|+++..+. .+.||++||...... . .+.......|+++||.|+.. +..|+|
T Consensus 12 ~~~~l~~~i~~p~~~~~~~---~~~VvllHG~~~~~~-----------~--~~~~~l~~~L~~~G~~v~~~---d~~g~g 72 (317)
T 1tca_A 12 PKSVLDAGLTCQGASPSSV---SKPILLVPGTGTTGP-----------Q--SFDSNWIPLSTQLGYTPCWI---SPPPFM 72 (317)
T ss_dssp CHHHHHHTEEETTBCTTSC---SSEEEEECCTTCCHH-----------H--HHTTTHHHHHHTTTCEEEEE---CCTTTT
T ss_pred CHHHHhheeeCCCCCCCCC---CCeEEEECCCCCCcc-----------h--hhHHHHHHHHHhCCCEEEEE---CCCCCC
Confidence 3345666688888764332 466889999632110 0 01113456778889999994 445666
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC---CcccEEEEeccCCCCCCCC----
Q 002194 728 DEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGAYNRTLTP---- 800 (954)
Q Consensus 728 ~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~~~~~~~~---- 800 (954)
.+. .....+++.+.++++.+.. ..+++.++||||||.++.+++...| ++++++|++++........
T Consensus 73 ~~~-----~~~~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~ 145 (317)
T 1tca_A 73 LND-----TQVNTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLD 145 (317)
T ss_dssp CSC-----HHHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHH
T ss_pred CCc-----HHHHHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhh
Confidence 542 2334567778888887753 2368999999999999999988765 7899999999865421100
Q ss_pred -CCCcccc-chh--h-hcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCCchHH--HHHHHHHHHhCCCcEEEEEe---
Q 002194 801 -FGFQNED-RTL--W-EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ--SDRFFNALKGHGALCRLVIL--- 870 (954)
Q Consensus 801 -~~~~~~~-~~~--~-~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~--~~~~~~~l~~~g~~~~~~~~--- 870 (954)
+.+.... ... . .-...+.... ......|+++++|+.|.+|+ +.. +......+. +. +.+..
T Consensus 146 ~~~~~~~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~--p~~~~g~~~~~~l~--~a--~~~~~~~~ 215 (317)
T 1tca_A 146 ALAVSAPSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQ--PQVSNSPLDSSYLF--NG--KNVQAQAV 215 (317)
T ss_dssp HTTCBCHHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSC--CCCSSSTTSTTCCB--TS--EEEEHHHH
T ss_pred hhhhcCchHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeEC--Cccccccchhhhcc--CC--ccEEeeec
Confidence 0000000 000 0 0001111000 01246899999999999997 554 211111121 11 22222
Q ss_pred ----CCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 871 ----PFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 871 ----~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
++.+|... ..+ ..++..+++||+.
T Consensus 216 ~~~~~~~gH~~~-l~~-p~~~~~v~~~L~~ 243 (317)
T 1tca_A 216 CGPLFVIDHAGS-LTS-QFSYVVGRSALRS 243 (317)
T ss_dssp HCTTCCCCTTHH-HHB-HHHHHHHHHHHHC
T ss_pred cCCCCccCcccc-cCC-HHHHHHHHHHhcC
Confidence 47789753 223 3456778888774
No 394
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.94 E-value=3.7e-07 Score=97.65 Aligned_cols=223 Identities=9% Similarity=-0.000 Sum_probs=124.7
Q ss_pred ceEEEEEe-CCceeEcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCc
Q 002194 314 TQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPI 392 (954)
Q Consensus 314 ~~l~~~~~-~G~~~~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~ 392 (954)
..|++++. ++..+.+.....+..++++|||+.++ .. . ..|+++|.++++.+.+...... .+
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v-~~-~-------------~~l~~~d~~~g~~~~~~~~~~~--~~- 96 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVA-TI-G-------------TKFCALNWKEQSAVVLATVDND--KK- 96 (297)
T ss_dssp TEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEE-EE-T-------------TEEEEEETTTTEEEEEEECCTT--CS-
T ss_pred CEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEE-EE-C-------------CeEEEEECCCCcEEEEEecCCC--CC-
Confidence 46889998 66665554446677889999999443 33 2 1788999988877766543211 01
Q ss_pred cccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEE
Q 002194 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVY 472 (954)
Q Consensus 393 ~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~ 472 (954)
......++++|||+ +++. +................||.++. + ++...+.........++|+|||+.|++
T Consensus 97 -----~~~~~di~~d~dG~-l~~~-~~~~~~~~~~~~~~~~~l~~~d~---~-g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 97 -----NNRFNDGKVDPAGR-YFAG-TMAEETAPAVLERHQGALYSLFP---D-HHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp -----SEEEEEEEECTTSC-EEEE-EEECCSBTTBCCTTCEEEEEECT---T-SCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred -----CCCCCCEEECCCCC-EEEe-cCCcccccccccCCCcEEEEEEC---C-CCEEEEeeccccccceEEcCCCCEEEE
Confidence 12345689999998 4333 21111000000012357888873 3 444445444444578999999999887
Q ss_pred EEeccccceEEEEEcC--CCCCCC-cEEEecCCC--CCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCC
Q 002194 473 ESWYKTRRTRTWVISP--GSKDVA-PRILFDRSS--EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATP 547 (954)
Q Consensus 473 ~~~~~~~~~~l~~~d~--~~~~~~-~~~l~~~~~--~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~ 547 (954)
+.... .+|++++. .++... .+.+..... ....+ +.++++|...+...
T Consensus 166 ~~~~~---~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g------~~~d~~G~lwva~~------------------- 217 (297)
T 3g4e_A 166 IDSLS---YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDG------MCIDAEGKLWVACY------------------- 217 (297)
T ss_dssp EEGGG---TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEE------EEEBTTSCEEEEEE-------------------
T ss_pred ecCCC---CcEEEEeccCCCCcccCcEEEEECCCCCCCCCe------eEECCCCCEEEEEc-------------------
Confidence 75443 35777665 343211 122222111 01111 55667775322222
Q ss_pred CCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCcccccc-ccCCEEEEEEecCC
Q 002194 548 EGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLY-LNQLKILTSKESKT 606 (954)
Q Consensus 548 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~s~~ 606 (954)
....|++||.++|+.......... .+.. .+|+ ||+++|+++.....
T Consensus 218 --~~~~v~~~d~~tG~~~~~i~~p~~----~~t~-------~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 218 --NGGRVIRLDPVTGKRLQTVKLPVD----KTTS-------CCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp --TTTEEEEECTTTCCEEEEEECSSS----BEEE-------EEEESGGGCEEEEEEBCTT
T ss_pred --CCCEEEEEcCCCceEEEEEECCCC----CceE-------EEEeCCCCCEEEEEcCCcC
Confidence 112499999998876554433311 1222 4677 88888888777544
No 395
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.94 E-value=4.7e-08 Score=109.34 Aligned_cols=176 Identities=12% Similarity=0.090 Sum_probs=82.9
Q ss_pred eEEEEEe-CC-ceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcc--
Q 002194 315 QLVLVSL-DG-TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAE-- 388 (954)
Q Consensus 315 ~l~~~~~-~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~-- 388 (954)
.|.++|+ ++ ....+... ..+.+++|+|++..++.+... ++.+.+||+.+++. ..........
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~------------d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER------------NGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET------------TSEEEEEETTCCC----------CSCC
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC------------CCEEEEEECCCCcccccccccCCcccc
Confidence 3555566 44 33333333 667889999999754444422 23899999985532 2211111100
Q ss_pred ------cCCc----cccccccCccceeec-cCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccc
Q 002194 389 ------DIPI----AFNSVRKGMRSINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLR 457 (954)
Q Consensus 389 ------~~p~----~~~~~~~g~~~~~ws-pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~ 457 (954)
..+. ...+....+..+.|+ |||+.|+-. ...+.+.+|++ ..+.....+......
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~-------------s~d~~i~vwd~--~~~~~~~~l~~~~~~ 299 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM-------------CKSGAWLRWNL--FANNDYNEISDSTMK 299 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE-------------CTTSEEEEEEC-----------------
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEE-------------eCCCCEEEEEC--ccCCCCceEeeecCc
Confidence 0000 111223345567776 899876654 33456777775 222222222221111
Q ss_pred c------------------Cceeecc-CCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeec
Q 002194 458 Y------------------GGISWCD-DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRT 518 (954)
Q Consensus 458 ~------------------~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s 518 (954)
+ ....|+| .++.++.+...++ .|+++|..++. ....+. .....+.+ ++||
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg---~V~lwd~~~~~-~~~~~~-~~~~~V~s------vafs 368 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG---LIQLINTYEKD-SNSIPI-QLGMPIVD------FCWH 368 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT---EEEEEETTCTT-CCEEEE-ECSSCEEE------EEEC
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC---EEEEEECCCCc-EEEEec-CCCCcEEE------EEEc
Confidence 1 1223443 3344444433332 46666766652 222222 22233444 8999
Q ss_pred cCCcEEEEEE
Q 002194 519 STGTYVIAKI 528 (954)
Q Consensus 519 pdG~~l~~~~ 528 (954)
|||++|+...
T Consensus 369 pdG~~LA~as 378 (393)
T 4gq1_A 369 QDGSHLAIAT 378 (393)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999999886
No 396
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.91 E-value=1.7e-07 Score=100.66 Aligned_cols=228 Identities=10% Similarity=-0.002 Sum_probs=122.2
Q ss_pred ceEEEEEeCCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCc
Q 002194 314 TQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPI 392 (954)
Q Consensus 314 ~~l~~~~~~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~ 392 (954)
..|++++.+|+.+.+... .....++++|||+.++.... ...|.+++.++. .+.+...... .
T Consensus 67 ~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~-------------~~~v~~~~~~g~-~~~~~~~~~~--~-- 128 (305)
T 3dr2_A 67 RRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHG-------------RRAITRSDADGQ-AHLLVGRYAG--K-- 128 (305)
T ss_dssp TEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETT-------------TTEEEEECTTSC-EEEEECEETT--E--
T ss_pred CEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECC-------------CCEEEEECCCCC-EEEEEeccCC--C--
Confidence 457788876665555444 55678899999995554331 126888888743 4444321100 0
Q ss_pred cccccccCccceeeccCCCCceEEEEeccCC------CccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccC
Q 002194 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGG------DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDD 466 (954)
Q Consensus 393 ~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spD 466 (954)
....+..++++|||+ +++ ++...+. ...........||+++. ++++.+.+. .......++|+||
T Consensus 129 ----~~~~~~~i~~d~dG~-l~~-td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 129 ----RLNSPNDLIVARDGA-IWF-TDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp ----ECSCCCCEEECTTSC-EEE-ECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEEEEEECTT
T ss_pred ----ccCCCCCEEECCCCC-EEE-eCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCcceEEcCC
Confidence 012345789999997 333 2210000 00000012357888884 456666665 4444567899999
Q ss_pred CceEEEEEeccc--cceEEEEEcCCCCCC-CcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecC
Q 002194 467 SLALVYESWYKT--RRTRTWVISPGSKDV-APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (954)
Q Consensus 467 g~~l~~~~~~~~--~~~~l~~~d~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~ 543 (954)
|+.|+++..... ...+|++++++++.. ....+.+.......+ +.++++|+ | |.. .
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg------i~~d~~G~-l-wv~-------------~- 256 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG------FCVDRGGW-L-WSS-------------S- 256 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS------EEECTTSC-E-EEC-------------C-
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe------EEECCCCC-E-EEe-------------c-
Confidence 999887754320 124688888765310 111222111111111 55666666 2 221 1
Q ss_pred CCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002194 544 GATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (954)
Q Consensus 544 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~ 616 (954)
...|++|+.++.....+..... +. ...|++|++.|++... ..+|.+++
T Consensus 257 -------~~gv~~~~~~g~~~~~~~~~~~------~~-------~~~f~~d~~~L~it~~-----~~l~~~~~ 304 (305)
T 3dr2_A 257 -------GTGVCVFDSDGQLLGHIPTPGT------AS-------NCTFDQAQQRLFITGG-----PCLWMLPL 304 (305)
T ss_dssp -------SSEEEEECTTSCEEEEEECSSC------CC-------EEEECTTSCEEEEEET-----TEEEEEEC
T ss_pred -------CCcEEEECCCCCEEEEEECCCc------ee-------EEEEeCCCCEEEEEcC-----CeEEEEEC
Confidence 1138999997665555543331 11 2457788887776554 25777654
No 397
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.91 E-value=6.3e-08 Score=106.63 Aligned_cols=126 Identities=14% Similarity=0.106 Sum_probs=77.6
Q ss_pred eeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcc-eEEEeccCc-eEEEeccCCCcccCCccccccccCc
Q 002194 325 VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQ-VGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGM 401 (954)
Q Consensus 325 ~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~-l~l~d~~g~-~~~~l~~~~~~~~~p~~~~~~~~g~ 401 (954)
...+... ..+..++|||||++|+..+.+ +. +.+||+.++ ....+.... ....+
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d-------------~~~v~iwd~~~~~~~~~~~~g~-----------h~~~v 243 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQD-------------GTIIRVFKTEDGVLVREFRRGL-----------DRADV 243 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETT-------------CSEEEEEETTTCCEEEEEECTT-----------CCSCE
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCC-------------CCEEEEEECCCCcEEEEEEcCC-----------CCCcE
Confidence 3445544 778899999999999988844 37 999999854 444444210 11345
Q ss_pred cceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEee---------------------cccccCc
Q 002194 402 RSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK---------------------LDLRYGG 460 (954)
Q Consensus 402 ~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~---------------------~~~~~~~ 460 (954)
..++|+|||+.++.. +..+.|.+|++......+...+.. .......
T Consensus 244 ~~~~~s~~~~~l~s~-------------s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (355)
T 3vu4_A 244 VDMKWSTDGSKLAVV-------------SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCK 310 (355)
T ss_dssp EEEEECTTSCEEEEE-------------ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCE
T ss_pred EEEEECCCCCEEEEE-------------ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceE
Confidence 789999999977665 345578888862111111111100 0111245
Q ss_pred eeeccCCceEEEEEeccccceEEEEEcCC
Q 002194 461 ISWCDDSLALVYESWYKTRRTRTWVISPG 489 (954)
Q Consensus 461 ~~~spDg~~l~~~~~~~~~~~~l~~~d~~ 489 (954)
++|++||+.|+....++ ..++|.+...
T Consensus 311 ~a~~~d~~~l~~~~~dg--~~~~~~~~~~ 337 (355)
T 3vu4_A 311 IAWISESSLVVVWPHTR--MIETFKVVFD 337 (355)
T ss_dssp EEESSSSEEEEEETTTT--EEEEEEEEEE
T ss_pred EEEeCCCCEEEEEeCCC--eEEEEEEEcC
Confidence 78999999988875432 2566665543
No 398
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=98.90 E-value=2.3e-09 Score=122.81 Aligned_cols=132 Identities=20% Similarity=0.218 Sum_probs=91.6
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCC-cEEEEcCCCC-C
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG-FAILGGPTTP-I 723 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G-~~V~~~~~~~-~ 723 (954)
+.|.. ...+|.|+. . ..++|+||++|||.+..+...... + ....|+++| ++|+..+|+- .
T Consensus 81 ~edcl--~l~v~~P~~--~--~~~~Pviv~iHGGg~~~g~~~~~~------~------~~~~la~~~~~vvv~~nYRlg~ 142 (498)
T 2ogt_A 81 SEDGL--YLNIWSPAA--D--GKKRPVLFWIHGGAFLFGSGSSPW------Y------DGTAFAKHGDVVVVTINYRMNV 142 (498)
T ss_dssp BSCCC--EEEEEESCS--S--SCCEEEEEEECCSTTTSCCTTCGG------G------CCHHHHHHHTCEEEEECCCCHH
T ss_pred CCCCc--EEEEEecCC--C--CCCCcEEEEEcCCccCCCCCCCCc------C------CHHHHHhCCCEEEEeCCCcCch
Confidence 45654 446778862 2 235899999999976544322110 1 134567766 9999988872 2
Q ss_pred CCCCCccc-----chhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCcccEEEEeccC
Q 002194 724 IGEGDEEA-----NDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGA 793 (954)
Q Consensus 724 ~G~G~~~~-----~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~ 793 (954)
.|++.... ....+...+.|+.++++|++++. ..|+++|.|+|+|+||.+++.++... ..+|+++|+.+|.
T Consensus 143 ~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 222 (498)
T 2ogt_A 143 FGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGS 222 (498)
T ss_dssp HHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCC
T ss_pred hhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCC
Confidence 24433221 12234567899999999998862 37999999999999999999888753 4679999999997
Q ss_pred CC
Q 002194 794 YN 795 (954)
Q Consensus 794 ~~ 795 (954)
..
T Consensus 223 ~~ 224 (498)
T 2ogt_A 223 GS 224 (498)
T ss_dssp TT
T ss_pred cc
Confidence 55
No 399
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.89 E-value=1.3e-07 Score=102.80 Aligned_cols=226 Identities=9% Similarity=0.021 Sum_probs=133.1
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
...|.|+||++.|+|+.. ....|++++.++++.+.+.. +.. +..+.|+|||++++..
T Consensus 51 ~egp~~~~~~~~l~~~d~--------~~~~i~~~d~~~~~~~~~~~-~~~-----v~~i~~~~dg~l~v~~--------- 107 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNI--------LERELHELHLASGRKTVHAL-PFM-----GSALAKISDSKQLIAS--------- 107 (326)
T ss_dssp EEEEEEETTTTEEEEEEG--------GGTEEEEEETTTTEEEEEEC-SSC-----EEEEEEEETTEEEEEE---------
T ss_pred CcCCeEeCCCCEEEEEEC--------CCCEEEEEECCCCcEEEEEC-CCc-----ceEEEEeCCCeEEEEE---------
Confidence 356899999999988742 24689999999887665532 221 5678899999877643
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC------ccccccccCCCC
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPDE 343 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~------~~~~~~~~SpDG 343 (954)
...|++++. +|+.+.+... ..+..+.++|||
T Consensus 108 ------------------------------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G 145 (326)
T 2ghs_A 108 ------------------------------------------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG 145 (326)
T ss_dssp ------------------------------------------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS
T ss_pred ------------------------------------------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC
Confidence 123888888 7776655331 245678899999
Q ss_pred cEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002194 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (954)
Q Consensus 344 k~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~ 423 (954)
+.. +....... ......|+.++ + ++.+.+.... .....++|+|||+.+++. +
T Consensus 146 ~l~-v~~~~~~~------~~~~~~l~~~~-~-g~~~~~~~~~-------------~~~~~i~~s~dg~~lyv~-~----- 197 (326)
T 2ghs_A 146 ALW-IGTMGRKA------ETGAGSIYHVA-K-GKVTKLFADI-------------SIPNSICFSPDGTTGYFV-D----- 197 (326)
T ss_dssp CEE-EEEEETTC------CTTCEEEEEEE-T-TEEEEEEEEE-------------SSEEEEEECTTSCEEEEE-E-----
T ss_pred CEE-EEeCCCcC------CCCceEEEEEe-C-CcEEEeeCCC-------------cccCCeEEcCCCCEEEEE-E-----
Confidence 854 43322110 01123677777 4 4444443210 123468999999876664 1
Q ss_pred CccccccCCCeEEEEecCCCCC-C--CceEEee---cccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002194 424 DAKVEVTPRDIIYTQQAEPVQG-E--GPEILHK---LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (954)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g-~--~~~~l~~---~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (954)
...+.|++++.++.++ . ..+.+.. ......++.+++||. |+.+.... ..|++++.++. ...
T Consensus 198 ------~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~---~~v~~~d~~g~---~~~ 264 (326)
T 2ghs_A 198 ------TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGE---GAVDRYDTDGN---HIA 264 (326)
T ss_dssp ------TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETT---TEEEEECTTCC---EEE
T ss_pred ------CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCC---CEEEEECCCCC---EEE
Confidence 1245789998621122 1 1123322 123445688899996 44443332 35889988542 222
Q ss_pred EecCCCCCccCCCCCCCeeec-cCCcEEEEEE
Q 002194 498 LFDRSSEDVYSDPGSPMMRRT-STGTYVIAKI 528 (954)
Q Consensus 498 l~~~~~~~~~~~~~~~~~~~s-pdG~~l~~~~ 528 (954)
....+...+.. ++|+ +|++.|+...
T Consensus 265 ~i~~~~~~~~~------~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 265 RYEVPGKQTTC------PAFIGPDASRLLVTS 290 (326)
T ss_dssp EEECSCSBEEE------EEEESTTSCEEEEEE
T ss_pred EEECCCCCcEE------EEEecCCCCEEEEEe
Confidence 22222222222 6787 8888777665
No 400
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.88 E-value=1.5e-09 Score=125.84 Aligned_cols=132 Identities=19% Similarity=0.198 Sum_probs=90.3
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCC-CC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTT-PI 723 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~-~~ 723 (954)
+.|... ..+|.|+.. + +.++|+||++|||.+..+..... .+ ....|++ +|++|+.++|+ +.
T Consensus 93 ~edcl~--l~v~~P~~~-~--~~~~Pviv~iHGGg~~~g~~~~~------~~------~~~~la~~~g~vvv~~nYRlg~ 155 (543)
T 2ha2_A 93 SEDCLY--LNVWTPYPR-P--ASPTPVLIWIYGGGFYSGAASLD------VY------DGRFLAQVEGAVLVSMNYRVGT 155 (543)
T ss_dssp ESCCCE--EEEEEESSC-C--SSCEEEEEEECCSTTTCCCTTSG------GG------CTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcCCe--EEEeecCCC-C--CCCCeEEEEECCCccccCCCCCC------cC------ChHHHHhcCCEEEEEecccccc
Confidence 456654 466778652 2 23589999999997654432211 01 1234565 79999998887 33
Q ss_pred CCCCCcc-cchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCcccEEEEeccCC
Q 002194 724 IGEGDEE-ANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAY 794 (954)
Q Consensus 724 ~G~G~~~-~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~ 794 (954)
.|++... .....+...+.|+.+|++|++++. ..|+++|.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 156 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 3443321 111223456899999999998862 37999999999999999998887653 46899999999854
No 401
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.83 E-value=3.6e-09 Score=109.56 Aligned_cols=169 Identities=14% Similarity=0.137 Sum_probs=91.0
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCC-CCcEEEEeeChHHHHHHHHHHh------CCC
Q 002194 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAH-PSKIAVGGHSYGAFMTANLLAH------APH 782 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d-~~ri~l~G~S~GG~~a~~~a~~------~p~ 782 (954)
+.+|.|++ .+..|+|.+... ...|+.+.++.+.+.-.+. .+++.++||||||.+|+.+|.+ .|+
T Consensus 37 ~~~~~vi~---~Dl~GhG~S~~~------~~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~ 107 (242)
T 2k2q_B 37 QGECEMLA---AEPPGHGTNQTS------AIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQ 107 (242)
T ss_dssp CCSCCCEE---EECCSSCCSCCC------TTTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSC
T ss_pred CCCeEEEE---EeCCCCCCCCCC------CcCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCC
Confidence 46799999 667788887432 1235555555554432222 2589999999999999999986 566
Q ss_pred cccEEEEeccCCCCCCC-CC----------CCccccchhhhc-----------HHHHH---hcCcccccCCCCCCEEEEE
Q 002194 783 LFCCGIARSGAYNRTLT-PF----------GFQNEDRTLWEA-----------TSTYV---EMSPFMSANKLKKPILLVH 837 (954)
Q Consensus 783 ~~~a~v~~~~~~~~~~~-~~----------~~~~~~~~~~~~-----------~~~~~---~~sp~~~~~~~~~P~Lii~ 837 (954)
.+-......+....... .. ...........+ ...+. .+.. ..+.++++|+|+++
T Consensus 108 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~ 186 (242)
T 2k2q_B 108 AVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFN 186 (242)
T ss_dssp SEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEE
T ss_pred EEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEe
Confidence 43111111111110000 00 000000000000 01111 1111 12567899999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHh
Q 002194 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
|++|..++ .....+ +..-...+++++++ ||... .+..+.+.+.+.+||.+.
T Consensus 187 G~~D~~~~---~~~~~~----~~~~~~~~~~~~~~-gH~~~-~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 187 GLDDKKCI---RDAEGW----KKWAKDITFHQFDG-GHMFL-LSQTEEVAERIFAILNQH 237 (242)
T ss_dssp ECSSCCHH---HHHHHH----HTTCCCSEEEEEEC-CCSHH-HHHCHHHHHHHHHHHHTT
T ss_pred eCCCCcCH---HHHHHH----HHHhcCCeEEEEeC-CceeE-cCCHHHHHHHHHHHhhcc
Confidence 99998753 333332 22222234777876 99763 455567788888888753
No 402
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.83 E-value=4.8e-07 Score=102.58 Aligned_cols=221 Identities=17% Similarity=0.182 Sum_probs=132.1
Q ss_pred ceecCCCCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecCCCCCcccc
Q 002194 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (954)
Q Consensus 114 ~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~ 193 (954)
..+++||++|+....+ +.|.+|++.+ + .....+.+ +...+..
T Consensus 137 ~~~~~d~~~l~~g~~d---------------------------------g~i~iwd~~~-~--~~~~~~~~--h~~~v~~ 178 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD---------------------------------NTIKIWDKNT-L--ECKRILTG--HTGSVLC 178 (435)
T ss_dssp EEEECCSSEEEEEESS---------------------------------SCEEEEESSS-C--CEEEEECC--CSSCEEE
T ss_pred EEEEECCCEEEEEeCC---------------------------------CeEEEEeCCC-C--eEEEEEcC--CCCcEEE
Confidence 3678899999988775 5799999854 2 22333433 2235666
Q ss_pred eeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCC
Q 002194 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (954)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~ 273 (954)
..| ||+.|+... ....|.++|+++++........... +..+.|++ ..|+...
T Consensus 179 l~~--~~~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~l~~~~--~~l~s~s----------- 230 (435)
T 1p22_A 179 LQY--DERVIITGS---------SDSTVRVWDVNTGEMLNTLIHHCEA----VLHLRFNN--GMMVTCS----------- 230 (435)
T ss_dssp EEC--CSSEEEEEE---------TTSCEEEEESSSCCEEEEECCCCSC----EEEEECCT--TEEEEEE-----------
T ss_pred EEE--CCCEEEEEc---------CCCeEEEEECCCCcEEEEEcCCCCc----EEEEEEcC--CEEEEee-----------
Confidence 776 888887754 2457788888887765444333322 56777763 3555441
Q ss_pred CCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce----eEcCCC-ccccccccCCCCcEEE
Q 002194 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV----KEIGPP-AVYTSLDPSPDEKYIL 347 (954)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~----~~l~~~-~~~~~~~~SpDGk~l~ 347 (954)
....|.++|+ ++.. ..+... ..+..++| ||++|+
T Consensus 231 --------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 270 (435)
T 1p22_A 231 --------------------------------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIV 270 (435)
T ss_dssp --------------------------------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEE
T ss_pred --------------------------------------CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEE
Confidence 1234667777 5432 223333 55666666 889988
Q ss_pred EEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 348 ~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
..+.+ +.+.+||+.+++. ..+..+. ..+..+.| +++.++..
T Consensus 271 s~~~d-------------g~i~vwd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~g---------- 312 (435)
T 1p22_A 271 SASGD-------------RTIKVWNTSTCEFVRTLNGHK-------------RGIACLQY--RDRLVVSG---------- 312 (435)
T ss_dssp EEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEE--ETTEEEEE----------
T ss_pred EEeCC-------------CeEEEEECCcCcEEEEEcCCC-------------CcEEEEEe--CCCEEEEE----------
Confidence 88743 3899999986543 3333221 22344555 45544433
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEc
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d 487 (954)
+..+.|.+|++ .++.....+..+...+..++| |++.|+..+.++. .++|.+.
T Consensus 313 ---~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~--i~vwd~~ 364 (435)
T 1p22_A 313 ---SSDNTIRLWDI--ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK--IKVWDLV 364 (435)
T ss_dssp ---ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC--EEEEEHH
T ss_pred ---eCCCeEEEEEC--CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc--EEEEECC
Confidence 33557899996 233334455555666677777 7888887765432 5566543
No 403
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.81 E-value=4.5e-09 Score=121.48 Aligned_cols=132 Identities=18% Similarity=0.210 Sum_probs=90.4
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCC-C
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTP-I 723 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~-~ 723 (954)
+.|. +...+|.|+... .++|+||++|||.+..+...... + ....|++ .|++|+..+|+- .
T Consensus 89 ~edc--l~lnv~~P~~~~----~~~Pv~v~iHGGg~~~g~~~~~~------~------~~~~la~~~~~vvv~~nYRlg~ 150 (529)
T 1p0i_A 89 SEDC--LYLNVWIPAPKP----KNATVLIWIYGGGFQTGTSSLHV------Y------DGKFLARVERVIVVSMNYRVGA 150 (529)
T ss_dssp CSCC--CEEEEEEESSCC----SSEEEEEEECCSTTTSCCTTCGG------G------CTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcC--CeEEEeeCCCCC----CCCeEEEEECCCccccCCCCccc------c------ChHHHhccCCeEEEEecccccc
Confidence 3455 445678886531 34899999999976544322111 1 1235565 799999988862 2
Q ss_pred CCCCCc-ccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhC--CCcccEEEEeccCCC
Q 002194 724 IGEGDE-EANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYN 795 (954)
Q Consensus 724 ~G~G~~-~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~ 795 (954)
.|++.. ......+...+.|+.+|++|++++ ...|+++|.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 151 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 151 LGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 233222 111122345688999999999886 247999999999999999999888764 368999999998653
No 404
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.79 E-value=4.6e-08 Score=103.19 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=56.4
Q ss_pred HHHHHHHC--CcEEEEcCCCCCCCCCCcccc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC
Q 002194 704 SVLLWLAR--GFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA 780 (954)
Q Consensus 704 ~~~~la~~--G~~V~~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~ 780 (954)
....|++. ||.|++ .+. |+|.+... ..+.....+++...++.+...... .+++.++||||||.++..++.++
T Consensus 27 ~~~~L~~~~~g~~v~~---~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~lvGhSmGG~ia~~~a~~~ 101 (279)
T 1ei9_A 27 IKKMVEKKIPGIHVLS---LEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL-QQGYNAMGFSQGGQFLRAVAQRC 101 (279)
T ss_dssp HHHHHHHHSTTCCEEE---CCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG-TTCEEEEEETTHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCcEEEE---EEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhc-cCCEEEEEECHHHHHHHHHHHHc
Confidence 45556654 889999 454 77765321 122222233444445555432212 26899999999999999999999
Q ss_pred CCc-ccEEEEeccCC
Q 002194 781 PHL-FCCGIARSGAY 794 (954)
Q Consensus 781 p~~-~~a~v~~~~~~ 794 (954)
|+. ++.+|++++..
T Consensus 102 ~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 102 PSPPMVNLISVGGQH 116 (279)
T ss_dssp CSSCEEEEEEESCCT
T ss_pred CCcccceEEEecCcc
Confidence 984 99999887643
No 405
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.79 E-value=2.3e-09 Score=124.39 Aligned_cols=130 Identities=18% Similarity=0.144 Sum_probs=87.1
Q ss_pred EEEEEEcC-----CCCCCCCC--CCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCC-
Q 002194 652 LSATLYLP-----PGYDPSKD--GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI- 723 (954)
Q Consensus 652 l~~~l~~P-----~~~~~~~~--~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~- 723 (954)
+...+|.| .. ...++ .++|+||++|||.|..+...... + ....|+++|++|+..+|+..
T Consensus 91 L~lnv~~P~~~~~~~-~~~~~~~~~~Pviv~iHGGg~~~g~~~~~~------~------~~~~l~~~g~vvv~~nYRl~~ 157 (551)
T 2fj0_A 91 IHANIHVPYYALPRD-AADKNRFAGLPVLVFIHGGGFAFGSGDSDL------H------GPEYLVSKDVIVITFNYRLNV 157 (551)
T ss_dssp CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTT------C------BCTTGGGGSCEEEEECCCCHH
T ss_pred eEEEEEecCcccccc-ccccCcCCCCCEEEEEcCCccccCCCcccc------c------CHHHHHhCCeEEEEeCCcCCc
Confidence 55677788 32 11111 12899999999976554332111 1 12345779999999888632
Q ss_pred CCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHh--CCCcccEEEEeccCC
Q 002194 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAY 794 (954)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~ 794 (954)
.|+.........+...+.|+.+|++|++++ ...|+++|.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 158 ~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 158 YGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 232221111112345689999999999886 23799999999999999999998876 357899999999853
No 406
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.78 E-value=6.2e-09 Score=120.34 Aligned_cols=132 Identities=16% Similarity=0.168 Sum_probs=90.0
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHH-HCCcEEEEcCCCC-C
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTP-I 723 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~-~ 723 (954)
+.|.. ...+|.|... . .++|+||++|||.|..+...... + ....|+ .+|++|+..+|+- .
T Consensus 91 sedcl--~lnv~~P~~~--~--~~~Pv~v~iHGG~~~~g~~~~~~------~------~~~~la~~~~~vvv~~nYRlg~ 152 (537)
T 1ea5_A 91 SEDCL--YLNIWVPSPR--P--KSTTVMVWIYGGGFYSGSSTLDV------Y------NGKYLAYTEEVVLVSLSYRVGA 152 (537)
T ss_dssp CSCCC--EEEEEECSSC--C--SSEEEEEEECCSTTTCCCTTCGG------G------CTHHHHHHHTCEEEECCCCCHH
T ss_pred CCcCC--eEEEeccCCC--C--CCCeEEEEECCCcccCCCCCCCc------c------ChHHHHhcCCEEEEEeccCccc
Confidence 44554 4567788652 1 34899999999976554332111 1 123455 7899999988862 2
Q ss_pred CCCCCc-ccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh--CCCcccEEEEeccCCC
Q 002194 724 IGEGDE-EANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYN 795 (954)
Q Consensus 724 ~G~G~~-~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~~ 795 (954)
.|+... ......+...+.|+.+|++|++++. ..||++|.|+|+|+||.+++.++.. ...+|+++|+.+|...
T Consensus 153 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 153 FGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 232221 0111123456899999999998862 4799999999999999999988775 2368999999998653
No 407
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.72 E-value=3.1e-07 Score=97.58 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=68.9
Q ss_pred CCCCceecCC----CCEEEEEecCCCCCccccccccceeeeeeecCCCCCCcceeeEeceEEEEccCCCCCCceeeeecC
Q 002194 110 PLPALSFSPQ----RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (954)
Q Consensus 110 ~~~~~~~SPD----G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~g~~~~~~~lt~~ 185 (954)
.+..+++||| |++++..... ..++.+.. .++.. -...+ .+..|.+|++..+|. ....+..+
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~--g~lv~--ss~~g-------~d~~V~~~~~s~dG~--~~~s~~~~ 177 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNI--KAVLGLTK--RRLVS--SSGTL-------SDQQVEVMTFAEDGG--GKENQFLM 177 (356)
T ss_dssp EEEEECC------CCEEEEEEEEE--EEEEEETT--TEEEE--EESSS-------TTCEEEEEEECTTSC--EEEEEEEC
T ss_pred ceEEEEECCCccccccEEEeCCCe--EEEEecCC--CcEEE--ecccC-------CCCcEEEEEECCCCc--eeeeeccC
Confidence 5678999999 9999886642 11222211 00000 00000 125788999966652 22233333
Q ss_pred CCCCcccceeecC---CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEE
Q 002194 186 PDGAKLNFVTWSQ---DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (954)
Q Consensus 186 ~~~~~~~~~~wSP---DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~ 261 (954)
+ ..+...+||| ||+.|+-.+ ....|.++|+++|+..+......... ..+...+|||||+.++..
T Consensus 178 ~--~~v~~l~fs~~~g~~~~LaSgS---------~D~TIkIWDl~TGk~l~tL~g~~~~v-~~v~~vafSpdG~~lvs~ 244 (356)
T 2w18_A 178 P--PEETILTFAEVQGMQEALLGTT---------IMNNIVIWNLKTGQLLKKMHIDDSYQ-ASVCHKAYSEMGLLFIVL 244 (356)
T ss_dssp C--CSSCEEEEEEEETSTTEEEEEE---------TTSEEEEEETTTCCEEEEEECCC----CCCEEEEEEETTEEEEEE
T ss_pred C--CceeeEEeeccCCCCceEEEec---------CCCcEEEEECCCCcEEEEEcCCCcce-eeeEEEEECCCCCEEEEe
Confidence 3 3577788898 778877755 36788888999888644433221110 113355799999988765
No 408
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.71 E-value=2.2e-08 Score=115.56 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=87.0
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHH-HHHH-HCCcEEEEcCCCCCC-CCCC
Q 002194 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWL-ARGFAILGGPTTPII-GEGD 728 (954)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la-~~G~~V~~~~~~~~~-G~G~ 728 (954)
+...+|.|++..+. .++|+||++|||.+..+... .+. +..++ ..++ ..|++|+..+|+-.. |+..
T Consensus 98 l~l~v~~P~~~~~~--~~~Pv~v~iHGGg~~~g~~~--------~~~--~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~ 165 (534)
T 1llf_A 98 LTINVVRPPGTKAG--ANLPVMLWIFGGGFEIGSPT--------IFP--PAQMVTKSVLMGKPIIHVAVNYRVASWGFLA 165 (534)
T ss_dssp CEEEEEECTTCCTT--CCEEEEEEECCSTTTSCCGG--------GSC--CHHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred eEEEEEECCCCCCC--CCceEEEEEeCCCcccCCCc--------ccC--chHHHHHHHhcCCCEEEEEeCCCCCCCCCCC
Confidence 55678899764332 24899999999976554321 111 11111 1222 368999998886332 2211
Q ss_pred cc--cchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhC--------CCcccEEEEeccC
Q 002194 729 EE--ANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--------PHLFCCGIARSGA 793 (954)
Q Consensus 729 ~~--~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~~~ 793 (954)
.. .....+...+.|+.+|++|++++ ...|+++|.|+|+|+||.+++.++... +.+|+++|+.+|.
T Consensus 166 ~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 166 GDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp SHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 10 01123346789999999999886 247999999999999999888877653 4689999999984
No 409
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.69 E-value=5.1e-06 Score=91.03 Aligned_cols=254 Identities=11% Similarity=0.032 Sum_probs=127.9
Q ss_pred eceEEEEccCCCCCCceeeeecCC-------CCC-cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeec
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFP-------DGA-KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL 234 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~-------~~~-~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 234 (954)
+.|+++|+.++- .+.+.+.... .+. .......+||| |+.+...+ ..+++...|.++|.++++...-
T Consensus 106 ~~I~viD~~t~p--~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~--~~g~~~g~v~vlD~~T~~v~~~ 179 (462)
T 2ece_A 106 SRIYIIDTKPNP--REPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGN--EEGEGPGGILMLDHYSFEPLGK 179 (462)
T ss_dssp CCEEEEECCSCT--TSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEE--TTSCSCCEEEEECTTTCCEEEE
T ss_pred CeEEEEECCCCC--CCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCC--cCCCCCCeEEEEECCCCeEEEE
Confidence 478999985432 2222222110 111 33445789999 33333221 2456678999999998876543
Q ss_pred ccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccc
Q 002194 235 FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATT 314 (954)
Q Consensus 235 t~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~ 314 (954)
...+... ......+.|+||++.++.+ .- +. |. .-..+. ...++.. ....
T Consensus 180 ~~~~~~~-~~~~Yd~~~~p~~~~mvsS-~w--g~-------p~-----~~~~g~-----~~~~~~~----------~~~d 228 (462)
T 2ece_A 180 WEIDRGD-QYLAYDFWWNLPNEVLVSS-EW--AV-------PN-----TIEDGL-----KLEHLKD----------RYGN 228 (462)
T ss_dssp CCSBCTT-CCCCCCEEEETTTTEEEEC-BC--CC-------HH-----HHTTCC-----CTTTHHH----------HSCC
T ss_pred EccCCCC-ccccceEEECCCCCEEEEc-cC--cC-------cc-----cccccc-----chhhhhh----------ccCC
Confidence 3222110 0001257889999977654 10 00 00 000000 0000000 1345
Q ss_pred eEEEEEe-CCce-eEcCCC---ccccc--cccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEecc--CC
Q 002194 315 QLVLVSL-DGTV-KEIGPP---AVYTS--LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD--LP 385 (954)
Q Consensus 315 ~l~~~~~-~G~~-~~l~~~---~~~~~--~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~--~~ 385 (954)
+|.++|+ +++. ..+..+ ..... +.++|||++++....... .....+|++|..+++..+.+.. .+
T Consensus 229 ~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~-------~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 229 RIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL-------KDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp EEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET-------TTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec-------cCCCceEEEEEecCCceeEEEEEeCC
Confidence 6888998 6643 233322 22222 466999999887764100 0123377777666554332221 11
Q ss_pred C---cccCC---ccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe----ecc
Q 002194 386 L---AEDIP---IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH----KLD 455 (954)
Q Consensus 386 ~---~~~~p---~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~----~~~ 455 (954)
. ...+| ..|.+.......+.+||||+.|++. ++ ..+.|.++++ .+.+..+.+. .+.
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVS-nr-----------g~d~VavfdV--~d~~~~~lv~~I~tGG~ 367 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLS-LW-----------GIGEVRQYDI--SNPFKPVLTGKVKLGGI 367 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEE-ET-----------TTTEEEEEEC--SSTTSCEEEEEEECBTT
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEE-eC-----------CCCEEEEEEe--cCCCCcEEEEEEEeCCe
Confidence 1 11111 1111112345679999999976554 22 2457888886 2333343331 111
Q ss_pred -------------cccCceeeccCCceEEEEE
Q 002194 456 -------------LRYGGISWCDDSLALVYES 474 (954)
Q Consensus 456 -------------~~~~~~~~spDg~~l~~~~ 474 (954)
+....+.+||||++|+.+.
T Consensus 368 ~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 368 FHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1257789999999998875
No 410
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.69 E-value=1e-05 Score=91.90 Aligned_cols=268 Identities=11% Similarity=0.042 Sum_probs=152.7
Q ss_pred eecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCC
Q 002194 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (954)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (954)
.+++||+.|+... ....|.++|+.+++........... +..+.|+ ++.|+...
T Consensus 124 ~~~~~g~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~--~~~l~s~~------------ 176 (445)
T 2ovr_B 124 CLQFCGNRIVSGS---------DDNTLKVWSAVTGKCLRTLVGHTGG----VWSSQMR--DNIIISGS------------ 176 (445)
T ss_dssp EEEEETTEEEEEE---------TTSCEEEEETTTCCEEEECCCCSSC----EEEEEEE--TTEEEEEE------------
T ss_pred EEEEcCCEEEEEE---------CCCcEEEEECCCCcEEEEEcCCCCC----EEEEEec--CCEEEEEe------------
Confidence 5778899888755 2557788888887765444333322 5667776 45666541
Q ss_pred CCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCCcEEEEEee
Q 002194 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYILISSI 351 (954)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~l~~~s~ 351 (954)
..+.|.++++ +|+. ..+... ..+..+.| +++.|+..+.
T Consensus 177 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s~ 217 (445)
T 2ovr_B 177 -------------------------------------TDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSR 217 (445)
T ss_dssp -------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred -------------------------------------CCCeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEEEEeC
Confidence 1234777787 6643 333333 55666666 4677777763
Q ss_pred cCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccc
Q 002194 352 HRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (954)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~ 430 (954)
+ +.+.+||+.+++. ..+..+. ..+..+.| ||+.++.. +
T Consensus 218 d-------------g~i~~wd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~~-------------~ 256 (445)
T 2ovr_B 218 D-------------ATLRVWDIETGQCLHVLMGHV-------------AAVRCVQY--DGRRVVSG-------------A 256 (445)
T ss_dssp T-------------SEEEEEESSSCCEEEEEECCS-------------SCEEEEEE--CSSCEEEE-------------E
T ss_pred C-------------CEEEEEECCCCcEEEEEcCCc-------------ccEEEEEE--CCCEEEEE-------------c
Confidence 3 3899999985543 3333221 23345666 77766554 3
Q ss_pred CCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCC
Q 002194 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (954)
Q Consensus 431 ~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~ 510 (954)
..+.|.+|++ .++.....+..+...+..+.| |++.|+....++ .|.++|+.++ +.......+...
T Consensus 257 ~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~----~i~i~d~~~~--~~~~~~~~~~~~----- 321 (445)
T 2ovr_B 257 YDFMVKVWDP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT----SIRVWDVETG--NCIHTLTGHQSL----- 321 (445)
T ss_dssp TTSCEEEEEG--GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS----CEEEEETTTC--CEEEEECCCCSC-----
T ss_pred CCCEEEEEEC--CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC----eEEEEECCCC--CEEEEEcCCccc-----
Confidence 3557888986 233233444445555666777 888887776543 3566666664 223222222111
Q ss_pred CCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCcccc
Q 002194 511 GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGD 590 (954)
Q Consensus 511 ~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 590 (954)
...++++++.++.... ...|++||+.+++.......... ....+. +
T Consensus 322 ---v~~~~~~~~~l~~~~~---------------------dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~---------~ 367 (445)
T 2ovr_B 322 ---TSGMELKDNILVSGNA---------------------DSTVKIWDIKTGQCLQTLQGPNK-HQSAVT---------C 367 (445)
T ss_dssp ---EEEEEEETTEEEEEET---------------------TSCEEEEETTTCCEEEEECSTTS-CSSCEE---------E
T ss_pred ---EEEEEEeCCEEEEEeC---------------------CCeEEEEECCCCcEEEEEccCCC-CCCCEE---------E
Confidence 1345667776665541 23499999988876554443210 000111 2
Q ss_pred ccccCCEEEEEEecCCCCceEEEEECCCCcee
Q 002194 591 LYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (954)
Q Consensus 591 ~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~ 622 (954)
+..+++.++.... ...+.+|++.+++..
T Consensus 368 ~~~~~~~l~s~~~----dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 368 LQFNKNFVITSSD----DGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEECSSEEEEEET----TSEEEEEETTTCCEE
T ss_pred EEECCCEEEEEeC----CCeEEEEECCCCcee
Confidence 3335555554332 356999998887653
No 411
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.69 E-value=3.9e-08 Score=110.48 Aligned_cols=161 Identities=12% Similarity=-0.024 Sum_probs=103.6
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (954)
.|+||++||..... ...+.......|++ .||.|+. .+..|+|.+.... ........|+.+.
T Consensus 70 ~~~vvllHG~~~s~-------------~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~g~s~~~~~~~~~~~~~~dl~~~ 133 (432)
T 1gpl_A 70 RKTRFIIHGFTDSG-------------ENSWLSDMCKNMFQVEKVNCIC---VDWKGGSKAQYSQASQNIRVVGAEVAYL 133 (432)
T ss_dssp SEEEEEECCTTCCT-------------TSHHHHHHHHHHHHHCCEEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCC-------------CchHHHHHHHHHHhcCCcEEEE---EECccccCccchhhHhhHHHHHHHHHHH
Confidence 58999999963110 01111123455665 7999999 5556666654221 1234456888999
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCCCCCCCCCCCccccchhhhcHHHHHhcCccccc
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSA 826 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 826 (954)
+++|.++..++.+++.++|||+||.+|+.++.++|+++++++.++|..-..... .. ..+.++
T Consensus 134 i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~----~~----------~~~l~~---- 195 (432)
T 1gpl_A 134 VQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDT----PE----------EVRLDP---- 195 (432)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTC----CT----------TTSCCG----
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCC----Ch----------hhccCc----
Confidence 999986644667899999999999999999999999999999988753211000 00 001111
Q ss_pred CCCCCCEEEEEeCCCCCCCCch---HHHHHHHHHHHhCCCcEEEEEeCCCCCcC
Q 002194 827 NKLKKPILLVHGEEDNNSGTLT---MQSDRFFNALKGHGALCRLVILPFESHGY 877 (954)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~---~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 877 (954)
....++.+||+..|.+|| . .... .. ..+.+||+.||..
T Consensus 196 -~da~~V~vIHt~~d~lVP--~~~~g~~~-------~l---g~~dfypngg~~q 236 (432)
T 1gpl_A 196 -SDAKFVDVIHTDISPILP--SLGFGMSQ-------KV---GHMDFFPNGGKDM 236 (432)
T ss_dssp -GGSSEEEEECSCCSCHHH--HCCCBCSS-------CC---SSEEEEEGGGSSC
T ss_pred -CCCceEEEEEcCCccccc--cccccccc-------cc---cceEEccCCCCCC
Confidence 223589999999999886 4 1111 11 2455689889954
No 412
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.68 E-value=8.7e-07 Score=96.77 Aligned_cols=253 Identities=9% Similarity=0.020 Sum_probs=131.4
Q ss_pred EEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhc
Q 002194 220 RVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLL 299 (954)
Q Consensus 220 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l 299 (954)
.|+++|+++++...-...+.. . .+.+||||+.+|++..... |. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-----P-~i~~spDg~~lyVan~~~~--------------------------r~----~ 90 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-----S-LAVAGHSGSDFALASTSFA--------------------------RS----A 90 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-----C-EEEECTTSSCEEEEEEEET--------------------------TT----T
T ss_pred eEEEEECCCCeEEEEEeCCCC-----C-ceEECCCCCEEEEEccccc--------------------------cc----c
Confidence 899999999877554433332 2 6899999999998721000 00 0
Q ss_pred cCccccccccccccceEEEEEe-CCc-eeEcCCC--------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceE
Q 002194 300 KDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP--------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVG 369 (954)
Q Consensus 300 ~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~--------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~ 369 (954)
.-+ ....|..+|+ +++ ...+.-+ .....+.+|||||++++..... ...+.
T Consensus 91 ~G~---------~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~-----------~~~v~ 150 (368)
T 1mda_H 91 KGK---------RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS-----------SAAAG 150 (368)
T ss_dssp SSS---------EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS-----------SCEEE
T ss_pred cCC---------CCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC-----------CCeEE
Confidence 000 1345888888 664 3333211 2356789999999998875321 11466
Q ss_pred E--EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec---cC-------------CCc------
Q 002194 370 V--WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ---DG-------------GDA------ 425 (954)
Q Consensus 370 l--~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~---~~-------------~~~------ 425 (954)
+ +|+.+ .+.+.........|. ....-+++++||+.+++-.+.. ++ ..+
T Consensus 151 V~~iD~~t--v~~i~v~~~~~~~p~------g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~ 222 (368)
T 1mda_H 151 LSVPGASD--DQLTKSASCFHIHPG------AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP 222 (368)
T ss_dssp EEETTTEE--EEEEECSSCCCCEEE------ETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT
T ss_pred EEEEchhh--ceEEECCCceEEccC------CCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccC
Confidence 6 66655 344422110000000 1111245566666544332210 00 000
Q ss_pred --cccccCCCeEEEEecCCCCCCCceEEeec----------ccccC---ceeeccCCceEEEEEecc-cc----ceEEEE
Q 002194 426 --KVEVTPRDIIYTQQAEPVQGEGPEILHKL----------DLRYG---GISWCDDSLALVYESWYK-TR----RTRTWV 485 (954)
Q Consensus 426 --~~~~~~~~~l~~~~~~~~~g~~~~~l~~~----------~~~~~---~~~~spDg~~l~~~~~~~-~~----~~~l~~ 485 (954)
.+.++. +.++++|. .++..+.+... .+... .++++|||++++++.... +. ...+.+
T Consensus 223 ~~~~~vs~-~~V~viD~---~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 223 GMLVWAVA-SSILQGDI---PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298 (368)
T ss_dssp TEEEECBS-SCCEEEEC---CSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEE
T ss_pred CEEEEEcC-CEEEEEEC---CCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEE
Confidence 011112 46777774 33332222111 11112 278999999988875511 10 123559
Q ss_pred EcCCCCCCCcEEE-ecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCCe
Q 002194 486 ISPGSKDVAPRIL-FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSK 564 (954)
Q Consensus 486 ~d~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 564 (954)
+|+.+... ...+ .... ..+ +.|+|||+++++.... ....|.++|+++++.
T Consensus 299 iD~~t~~v-v~~i~vg~~---p~g------i~~s~Dg~~l~va~~~-------------------~~~~VsVID~~t~kv 349 (368)
T 1mda_H 299 VTASVGQT-SGPISNGHD---SDA------IIAAQDGASDNYANSA-------------------GTEVLDIYDAASDQD 349 (368)
T ss_dssp EESSSCCE-EECCEEEEE---ECE------EEECCSSSCEEEEEET-------------------TTTEEEEEESSSCEE
T ss_pred EECCCCeE-EEEEECCCC---cce------EEECCCCCEEEEEccC-------------------CCCeEEEEECCCCcE
Confidence 99988521 1111 1111 112 7899999988887631 023599999999886
Q ss_pred EEEec
Q 002194 565 ERIWE 569 (954)
Q Consensus 565 ~~l~~ 569 (954)
..-..
T Consensus 350 v~~I~ 354 (368)
T 1mda_H 350 QSSVE 354 (368)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 65443
No 413
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.67 E-value=2.9e-08 Score=115.90 Aligned_cols=115 Identities=18% Similarity=0.163 Sum_probs=79.9
Q ss_pred CCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCC-CCCCCCCc-------ccchhhHHH
Q 002194 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTT-PIIGEGDE-------EANDRFVEQ 738 (954)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~-~~~G~G~~-------~~~~~~~~~ 738 (954)
.++|+|||+|||.|..+...... + . ...|++ .|++|+..+|+ +..|+... ......+..
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~~------~---~---~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~ 206 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLDI------Y---N---ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNV 206 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGG------G---C---CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCH
T ss_pred CCCCEEEEECCCcccCCCCCCCC------C---C---chhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcc
Confidence 35899999999976554322111 1 1 234554 79999998887 33333221 011112345
Q ss_pred HHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCcccEEEEeccCC
Q 002194 739 LVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAY 794 (954)
Q Consensus 739 ~~~D~~~av~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~ 794 (954)
.+.|+.+|++|++++- ..||++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 207 gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 207 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 6889999999999872 36999999999999999998887753 36899999999854
No 414
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=1.7e-06 Score=93.01 Aligned_cols=241 Identities=9% Similarity=0.046 Sum_probs=129.3
Q ss_pred eceEEEEccCCCCCCceeeeecC---CCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeec-ccCC
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGF---PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL-FQSP 238 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~---~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-t~~~ 238 (954)
..|++|+..+ ++.+.+... .....+....++||+..|+++.. ...|++++.+ |+.+.+ ....
T Consensus 46 ~~i~~~d~~~----g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~d~~-g~~~~~~~~~~ 111 (314)
T 1pjx_A 46 GEILRIDLKT----GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVVQTD-GTFEEIAKKDS 111 (314)
T ss_dssp CEEEEECTTT----CCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEEETT-SCEEECCSBCT
T ss_pred CEEEEEeCCC----CcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEEeCC-CCEEEEEeccC
Confidence 3677777533 333333210 01124667889999334554331 2379999998 777665 4322
Q ss_pred CccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEE
Q 002194 239 DIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (954)
Q Consensus 239 ~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~ 318 (954)
.......+..+++++||++.+......... . +..... ......|++
T Consensus 112 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~--~-------------------------~~~~~~-------~~~~~~l~~ 157 (314)
T 1pjx_A 112 EGRRMQGCNDCAFDYEGNLWITAPAGEVAP--A-------------------------DYTRSM-------QEKFGSIYC 157 (314)
T ss_dssp TSCBCBCCCEEEECTTSCEEEEECBCBCTT--S-------------------------CCCBTT-------SSSCEEEEE
T ss_pred CCccccCCcCEEECCCCCEEEEecCccccc--c-------------------------cccccc-------cCCCCeEEE
Confidence 110011255788999997555431110000 0 000000 002345888
Q ss_pred EEeCCceeEcCCC-ccccccccC----CCCcEEEEEeecCCcccccccCCCCcceEEEecc-CceEE---EeccCCCccc
Q 002194 319 VSLDGTVKEIGPP-AVYTSLDPS----PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVR---ELCDLPLAED 389 (954)
Q Consensus 319 ~~~~G~~~~l~~~-~~~~~~~~S----pDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~-g~~~~---~l~~~~~~~~ 389 (954)
++.+|+...+... .....++|+ |||+.|++.... ...|++|+.+ .+... .+...+...
T Consensus 158 ~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~- 224 (314)
T 1pjx_A 158 FTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP------------TKKLWSYDIKGPAKIENKKVWGHIPGTH- 224 (314)
T ss_dssp ECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT------------TTEEEEEEEEETTEEEEEEEEEECCCCS-
T ss_pred ECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECC------------CCeEEEEECCCCCccccceEEEECCCCC-
Confidence 8776655544333 344667899 999988776522 2378899876 33321 111111100
Q ss_pred CCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecccccCceeeccCCce
Q 002194 390 IPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLA 469 (954)
Q Consensus 390 ~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~ 469 (954)
...+..+++++||+ + |... ...+.|++++. .++.....+......+..++|+|||+.
T Consensus 225 --------~~~p~~i~~d~~G~-l-~v~~-----------~~~~~i~~~d~--~~g~~~~~~~~~~~~~~~i~~~~dg~~ 281 (314)
T 1pjx_A 225 --------EGGADGMDFDEDNN-L-LVAN-----------WGSSHIEVFGP--DGGQPKMRIRCPFEKPSNLHFKPQTKT 281 (314)
T ss_dssp --------SCEEEEEEEBTTCC-E-EEEE-----------ETTTEEEEECT--TCBSCSEEEECSSSCEEEEEECTTSSE
T ss_pred --------CCCCCceEECCCCC-E-EEEE-----------cCCCEEEEEcC--CCCcEeEEEeCCCCCceeEEECCCCCE
Confidence 01235688999995 2 2211 12347888884 224444445444455677899999998
Q ss_pred EEEEEeccccceEEEEEcCCC
Q 002194 470 LVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~ 490 (954)
|+++...+ ..|++++++.
T Consensus 282 l~v~~~~~---~~l~~~~~~~ 299 (314)
T 1pjx_A 282 IFVTEHEN---NAVWKFEWQR 299 (314)
T ss_dssp EEEEETTT---TEEEEEECSS
T ss_pred EEEEeCCC---CeEEEEeCCC
Confidence 87775443 3588888765
No 415
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.66 E-value=3.1e-08 Score=114.55 Aligned_cols=134 Identities=24% Similarity=0.315 Sum_probs=88.2
Q ss_pred cCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHH-HHH-HCCcEEEEcCCCCC
Q 002194 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVL-LWL-ARGFAILGGPTTPI 723 (954)
Q Consensus 646 ~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~la-~~G~~V~~~~~~~~ 723 (954)
+.|. +...+|.|++.... .++|+|||+|||.+..+... .+. +..++. .++ ..|++|+..+|+..
T Consensus 102 sedc--l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~~--------~~~--~~~l~~~~l~~~~~~vvv~~nYRl~ 167 (544)
T 1thg_A 102 NEDC--LYLNVFRPAGTKPD--AKLPVMVWIYGGAFVYGSSA--------AYP--GNSYVKESINMGQPVVFVSINYRTG 167 (544)
T ss_dssp CSCC--CEEEEEEETTCCTT--CCEEEEEEECCCTTCCSGGG--------GCC--SHHHHHHHHHTTCCCEEEEECCCCH
T ss_pred CCCC--eEEEEEeCCCCCCC--CCCcEEEEECCCccccCCcc--------ccC--chHHHHHHhhcCCCEEEEeCCCCCC
Confidence 3455 45567889764332 35899999999976654321 111 111121 122 25899999888643
Q ss_pred C-CCCCccc--chhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhC--------CCcccEEEE
Q 002194 724 I-GEGDEEA--NDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--------PHLFCCGIA 789 (954)
Q Consensus 724 ~-G~G~~~~--~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~ 789 (954)
. |+..... ....+...+.|+.+|++|++++ ...|+++|.|+|+|+||.+++.++... ..+|+++|+
T Consensus 168 ~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~ 247 (544)
T 1thg_A 168 PFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAIL 247 (544)
T ss_dssp HHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEE
T ss_pred cccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEE
Confidence 2 2111100 0122345689999999999886 247999999999999999998887752 467999999
Q ss_pred eccC
Q 002194 790 RSGA 793 (954)
Q Consensus 790 ~~~~ 793 (954)
.+|.
T Consensus 248 ~Sg~ 251 (544)
T 1thg_A 248 QSGG 251 (544)
T ss_dssp ESCC
T ss_pred eccc
Confidence 9984
No 416
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.66 E-value=5.4e-05 Score=82.97 Aligned_cols=119 Identities=13% Similarity=-0.024 Sum_probs=60.6
Q ss_pred cccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002194 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (954)
Q Consensus 335 ~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i 413 (954)
..+..+||| |+++...+. .+...+.+.++|.++.++ .++......... ...+.|+||++ +
T Consensus 141 h~~~~~pdG--i~Vs~~g~~------~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~----------~Yd~~~~p~~~-~ 201 (462)
T 2ece_A 141 HTVHCGPDA--IYISALGNE------EGEGPGGILMLDHYSFEPLGKWEIDRGDQYL----------AYDFWWNLPNE-V 201 (462)
T ss_dssp EEEEECSSC--EEEEEEEET------TSCSCCEEEEECTTTCCEEEECCSBCTTCCC----------CCCEEEETTTT-E
T ss_pred cceeECCCe--EEEEcCCCc------CCCCCCeEEEEECCCCeEEEEEccCCCCccc----------cceEEECCCCC-E
Confidence 345789999 444443332 122356899999986654 344322111111 12578999999 4
Q ss_pred eEEEEe------ccCCCcc-ccccCCCeEEEEecCCCCCCCce-EEeec-c-cccCce--eeccCCceEEEEEe
Q 002194 414 LYWAET------QDGGDAK-VEVTPRDIIYTQQAEPVQGEGPE-ILHKL-D-LRYGGI--SWCDDSLALVYESW 475 (954)
Q Consensus 414 ~~~~~~------~~~~~~~-~~~~~~~~l~~~~~~~~~g~~~~-~l~~~-~-~~~~~~--~~spDg~~l~~~~~ 475 (954)
+|..+. ..|-... ......++|.+|++ ++++.. .+.-+ . .....+ +|+|||++++....
T Consensus 202 mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~---~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 202 LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL---RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET---TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred EEEccCcCccccccccchhhhhhccCCEEEEEEC---CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence 444321 0110000 00023578999996 443322 22221 1 112223 45999998777654
No 417
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.65 E-value=1.8e-08 Score=116.84 Aligned_cols=140 Identities=17% Similarity=0.131 Sum_probs=86.7
Q ss_pred EcCCCeEEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCC-
Q 002194 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTP- 722 (954)
Q Consensus 645 ~~~~g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~- 722 (954)
.+.|. +...+|.|..... ...++|+|||+|||.|..+....... ..... .....|+. .|++|+..+|+-
T Consensus 76 ~sedc--l~lnv~~P~~~~~-~~~~~PV~v~iHGGg~~~Gs~~~~~~-----~~~~~-~~~~~la~~~~vvvV~~nYRLg 146 (579)
T 2bce_A 76 GNEDC--LYLNIWVPQGRKE-VSHDLPVMIWIYGGAFLMGASQGANF-----LSNYL-YDGEEIATRGNVIVVTFNYRVG 146 (579)
T ss_dssp SCSCC--CEEEEEEEECSSS-CCCSEEEEEECCCCSEEEC------------CTTGG-GCCHHHHHHHTCEEEEECCCCH
T ss_pred CCCCC--CEEEEEECCCCCC-CCCCCeEEEEECCCcccCCCCCcccc-----ccccc-cChHHHhcCCCEEEEEeCCccc
Confidence 34565 4556788865321 12358999999999765443211000 00000 00234554 579999988862
Q ss_pred CCCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHh--CCCcccEEEEeccC
Q 002194 723 IIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGA 793 (954)
Q Consensus 723 ~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~ 793 (954)
..|+.............+.|+.+|++|++++ ...|+++|.|+|+|+||.++..++.. ...+|+++|+.+|.
T Consensus 147 ~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 147 PLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred cccCCcCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 2232221101111123578999999999886 24799999999999999999988765 34689999999874
No 418
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.65 E-value=2.5e-06 Score=89.53 Aligned_cols=190 Identities=15% Similarity=0.105 Sum_probs=118.9
Q ss_pred CCeEEEEEeeccccCCCCceEEEEEECCCCceeec-----ccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCC
Q 002194 200 GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL-----FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (954)
Q Consensus 200 G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-----t~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (954)
|..|+|+. ...|++++++++..+.+ ...+.. ....++|+++++.|+++..
T Consensus 1 ~~~l~~~~----------~~~I~~~~~~g~~~~~~~~~~~~~~~~~----~~~gi~~d~~~~~ly~~d~----------- 55 (267)
T 1npe_A 1 GTHLLFAQ----------TGKIERLPLERNTMKKTEAKAFLHIPAK----VIIGLAFDCVDKVVYWTDI----------- 55 (267)
T ss_dssp CEEEEEEE----------EEEEEEEEESSSCBCGGGCEEEEEEEEE----EEEEEEEETTTTEEEEEET-----------
T ss_pred CcEEEEEc----------CCeEEEEEecCcccccccceeeecCCCC----cEEEEEEecCCCEEEEEEC-----------
Confidence 56788865 34899999988654321 111111 1457899998888887610
Q ss_pred CCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCC-ceeEcC-CC-ccccccccCCCCcEEEEEee
Q 002194 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIG-PP-AVYTSLDPSPDEKYILISSI 351 (954)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l~-~~-~~~~~~~~SpDGk~l~~~s~ 351 (954)
....|++++++| ....+. .. .....++++|+++.|+++..
T Consensus 56 -------------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 56 -------------------------------------SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp -------------------------------------TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET
T ss_pred -------------------------------------CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC
Confidence 234688899844 333333 23 45677889999888887763
Q ss_pred cCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccC
Q 002194 352 HRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTP 431 (954)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~ 431 (954)
. ...|++++.++...+.+.... ...+..++++|++..+++. +.. ..
T Consensus 99 ~------------~~~I~~~~~~g~~~~~~~~~~------------~~~P~~i~vd~~~g~lyv~-~~~---------~~ 144 (267)
T 1npe_A 99 Q------------LDRIEVAKMDGTQRRVLFDTG------------LVNPRGIVTDPVRGNLYWT-DWN---------RD 144 (267)
T ss_dssp T------------TTEEEEEETTSCSCEEEECSS------------CSSEEEEEEETTTTEEEEE-ECC---------SS
T ss_pred C------------CCEEEEEEcCCCCEEEEEECC------------CCCccEEEEeeCCCEEEEE-ECC---------CC
Confidence 2 237888898876544443211 0234578999987655443 221 11
Q ss_pred CCeEEEEecCCCCCCCceEEeec-ccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 432 RDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 432 ~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
...|++++. ++...+.+... .....++++++|++.|+++.... .+|++++.++.
T Consensus 145 ~~~I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~---~~I~~~~~~g~ 199 (267)
T 1npe_A 145 NPKIETSHM---DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT---HRAECLNPAQP 199 (267)
T ss_dssp SCEEEEEET---TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTEE
T ss_pred CcEEEEEec---CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCC---CEEEEEecCCC
Confidence 357888885 55555555322 23456789999999988875443 47999998863
No 419
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.63 E-value=5.5e-06 Score=92.70 Aligned_cols=223 Identities=9% Similarity=-0.066 Sum_probs=120.8
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce-eecc---c-CC
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLF---Q-SP 238 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt---~-~~ 238 (954)
.|+++++.+ +....+.. ...... ++|+|||+.|+.+.. ++...||+++.+++.. +.+. . ..
T Consensus 153 ~I~~id~~~----g~~~~~~~--~~~~~~-ia~~~~g~~l~~~d~-------~~~~~I~~~d~~~~~~~~~~g~~~~~~~ 218 (409)
T 3hrp_A 153 RVRLISVDD----NKVTTVHP--GFKGGK-PAVTKDKQRVYSIGW-------EGTHTVYVYMKASGWAPTRIGQLGSTFS 218 (409)
T ss_dssp EEEEEETTT----TEEEEEEE--TCCBCB-CEECTTSSEEEEEBS-------STTCEEEEEEGGGTTCEEEEEECCTTSC
T ss_pred cEEEEECCC----CEEEEeec--cCCCCc-eeEecCCCcEEEEec-------CCCceEEEEEcCCCceeEEeeeccchhc
Confidence 678888743 44444432 122334 999999998777542 2233899999887654 2331 1 11
Q ss_pred CccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEE
Q 002194 239 DIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (954)
Q Consensus 239 ~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~ 318 (954)
. ....++++|++..|+++ . ....|++
T Consensus 219 ~-----~p~~iav~p~~g~lyv~-d------------------------------------------------~~~~I~~ 244 (409)
T 3hrp_A 219 G-----KIGAVALDETEEWLYFV-D------------------------------------------------SNKNFGR 244 (409)
T ss_dssp S-----CCCBCEECTTSSEEEEE-C------------------------------------------------TTCEEEE
T ss_pred C-----CcEEEEEeCCCCeEEEE-E------------------------------------------------CCCcEEE
Confidence 1 14578899955556655 0 1235888
Q ss_pred EEe-CCceeEc----CCC-ccc--c-ccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCC---C
Q 002194 319 VSL-DGTVKEI----GPP-AVY--T-SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP---L 386 (954)
Q Consensus 319 ~~~-~G~~~~l----~~~-~~~--~-~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~---~ 386 (954)
++. ++....+ ... ... . .++|+|++..|+++... ...|+.++.++. ...+.... .
T Consensus 245 ~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~-~~~~~g~~~~~g 311 (409)
T 3hrp_A 245 FNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------------LSSVYKITPDGE-CEWFCGSATQKT 311 (409)
T ss_dssp EETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------------TTEEEEECTTCC-EEEEEECTTCCS
T ss_pred EECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------------CCEEEEEecCCC-EEEEEeCCCCCC
Confidence 888 5554444 222 112 2 78999987777766522 237888888876 33332221 0
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec------------
Q 002194 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL------------ 454 (954)
Q Consensus 387 ~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~------------ 454 (954)
...-+ ........+..++++|||+ +|+++. .....|+++++ ..+....+...
T Consensus 312 ~~dg~-~~~~~~~~P~gia~d~dG~--lyvad~----------~~~~~I~~~~~---~~G~v~~~~g~~~~~g~~~g~~~ 375 (409)
T 3hrp_A 312 VQDGL-REEALFAQPNGMTVDEDGN--FYIVDG----------FKGYCLRKLDI---LDGYVSTVAGQVDVASQIDGTPL 375 (409)
T ss_dssp CBCEE-GGGCBCSSEEEEEECTTCC--EEEEET----------TTTCEEEEEET---TTTEEEEEEECTTCBSCCCBSTT
T ss_pred cCCCc-ccccEeCCCeEEEEeCCCC--EEEEeC----------CCCCEEEEEEC---CCCEEEEEeCCCCCCCcCCCChh
Confidence 00000 0001112356799999997 444332 02457888884 34444444332
Q ss_pred ---ccccCceeeccCCceEEEEEeccccceEEEEEc
Q 002194 455 ---DLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (954)
Q Consensus 455 ---~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d 487 (954)
-....++++++|| .|+++... + .+|++++
T Consensus 376 ~~~~~~P~giavd~~g-~lyVad~~-n--~~Ir~i~ 407 (409)
T 3hrp_A 376 EATFNYPYDICYDGEG-GYWIAEAW-G--KAIRKYA 407 (409)
T ss_dssp TCCBSSEEEEEECSSS-EEEEEEST-T--CEEEEEE
T ss_pred ceEeCCceEEEEcCCC-CEEEEECC-C--CeEEEEE
Confidence 1123457888885 34444322 2 3455554
No 420
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.61 E-value=7.3e-06 Score=85.84 Aligned_cols=224 Identities=10% Similarity=0.036 Sum_probs=134.1
Q ss_pred ceEEEEEeCCc-ee------EcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCC
Q 002194 314 TQLVLVSLDGT-VK------EIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP 385 (954)
Q Consensus 314 ~~l~~~~~~G~-~~------~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~ 385 (954)
..|++++++|. .+ .+..+ .....++|+|+++.|+++... ...|+.++.+++..+.+....
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~------------~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS------------EPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT------------TTEEEEEESSSCCCEEEECTT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC------------CCEEEEEecCCCCcEEEEECC
Confidence 46888998542 22 12112 345688999999998887633 237889999877554433211
Q ss_pred CcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecc-cccCceeec
Q 002194 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWC 464 (954)
Q Consensus 386 ~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~s 464 (954)
...+..++++|++..+++. +. ..+.|++++. ++...+.+.... .....++++
T Consensus 78 ------------~~~p~~ia~d~~~~~lyv~-d~-----------~~~~I~~~~~---~g~~~~~~~~~~~~~P~~i~vd 130 (267)
T 1npe_A 78 ------------LGSPEGIALDHLGRTIFWT-DS-----------QLDRIEVAKM---DGTQRRVLFDTGLVNPRGIVTD 130 (267)
T ss_dssp ------------CCCEEEEEEETTTTEEEEE-ET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEEE
T ss_pred ------------CCCccEEEEEecCCeEEEE-EC-----------CCCEEEEEEc---CCCCEEEEEECCCCCccEEEEe
Confidence 0234578899987765443 22 2457888885 555555553322 345678999
Q ss_pred cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCC
Q 002194 465 DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNG 544 (954)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~ 544 (954)
|++..|+++..... ..+|+++++++. ....+.........+ ++++++++.|++...
T Consensus 131 ~~~g~lyv~~~~~~-~~~I~~~~~dg~--~~~~~~~~~~~~P~g------ia~d~~~~~lyv~d~--------------- 186 (267)
T 1npe_A 131 PVRGNLYWTDWNRD-NPKIETSHMDGT--NRRILAQDNLGLPNG------LTFDAFSSQLCWVDA--------------- 186 (267)
T ss_dssp TTTTEEEEEECCSS-SCEEEEEETTSC--CCEEEECTTCSCEEE------EEEETTTTEEEEEET---------------
T ss_pred eCCCEEEEEECCCC-CcEEEEEecCCC--CcEEEEECCCCCCcE------EEEcCCCCEEEEEEC---------------
Confidence 99888888754321 257999988764 233333222111112 778999888887762
Q ss_pred CCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCcee
Q 002194 545 ATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (954)
Q Consensus 545 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~ 622 (954)
....|+++|++++..+.+...... . ..+.+|++.++++... ...+++++..+++..
T Consensus 187 -----~~~~I~~~~~~g~~~~~~~~~~~~-----P---------~gi~~d~~~lyva~~~---~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 187 -----GTHRAECLNPAQPGRRKVLEGLQY-----P---------FAVTSYGKNLYYTDWK---TNSVIAMDLAISKEM 242 (267)
T ss_dssp -----TTTEEEEEETTEEEEEEEEECCCS-----E---------EEEEEETTEEEEEETT---TTEEEEEETTTTEEE
T ss_pred -----CCCEEEEEecCCCceEEEecCCCC-----c---------eEEEEeCCEEEEEECC---CCeEEEEeCCCCCce
Confidence 123599999987654444321110 1 1234566677665443 346888887777543
No 421
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.60 E-value=1.1e-07 Score=102.93 Aligned_cols=174 Identities=13% Similarity=0.093 Sum_probs=102.2
Q ss_pred HCCcEEEEcCCCCCCCCCCc-----ccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC----
Q 002194 710 ARGFAILGGPTTPIIGEGDE-----EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---- 780 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~-----~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~---- 780 (954)
..+|.|+. .+..|+|.+ ...........+|+.+.++.+.. ..++.++|||+||.+|..+|.+.
T Consensus 115 ~~~~~v~~---~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~-----~~p~~l~G~S~GG~vA~~~A~~l~~~~ 186 (319)
T 2hfk_A 115 QEERDFLA---VPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----DAPVVLLGHAGGALLAHELAFRLERAH 186 (319)
T ss_dssp TTTCCEEE---ECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEE---ecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHHhh
Confidence 47899999 555666665 33334456666666666655421 24799999999999999999875
Q ss_pred CCcccEEEEeccCCCCCCCCC--------------CCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCCCCC
Q 002194 781 PHLFCCGIARSGAYNRTLTPF--------------GFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGT 846 (954)
Q Consensus 781 p~~~~a~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~ 846 (954)
++.++++|++++......... .+.............|...-......++++|+|+++| .|..++
T Consensus 187 g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~- 264 (319)
T 2hfk_A 187 GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGD- 264 (319)
T ss_dssp SCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSC-
T ss_pred CCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCC-
Confidence 456899998876422100000 0000000000011111110000123678899999999 999887
Q ss_pred chHH-HHHHHHHHHhCCCcEEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHhc
Q 002194 847 LTMQ-SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (954)
Q Consensus 847 ~~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (954)
... ...+.+. ...+++++.+++ +|.....+....+.+.|.+||.+..
T Consensus 265 -~~~~~~~~~~~---~~~~~~~~~v~g-~H~~~~~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 265 -WQEERGDWRAH---WDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp -CCGGGCCCSCC---CSSCSEEEEESS-CTTHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -ccccccchhhc---CCCCCEEEEeCC-CcHHHHHHhHHHHHHHHHHHHHhcC
Confidence 544 2222111 123468888995 8974322467788888999998754
No 422
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.58 E-value=3.4e-06 Score=91.46 Aligned_cols=191 Identities=9% Similarity=-0.010 Sum_probs=110.7
Q ss_pred CCCeEEEEEeeccccCCCCceEEEEEECCCCcee-ecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCC
Q 002194 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR-PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPL 277 (954)
Q Consensus 199 DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~ 277 (954)
++++|+.+.. ....|.++|+++++.. .+..... ...+++++|| .|+++..
T Consensus 52 ~~~~lyv~~~--------~~~~v~viD~~t~~~~~~i~~~~~------p~~i~~~~~g-~lyv~~~-------------- 102 (328)
T 3dsm_A 52 RDGIGWIVVN--------NSHVIFAIDINTFKEVGRITGFTS------PRYIHFLSDE-KAYVTQI-------------- 102 (328)
T ss_dssp ETTEEEEEEG--------GGTEEEEEETTTCCEEEEEECCSS------EEEEEEEETT-EEEEEEB--------------
T ss_pred ECCEEEEEEc--------CCCEEEEEECcccEEEEEcCCCCC------CcEEEEeCCC-eEEEEEC--------------
Confidence 5666666542 2468999999988774 3422221 4578899999 5665510
Q ss_pred CCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCcee-EcCCCc------cccccccCCCCcEEEEE
Q 002194 278 GPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPA------VYTSLDPSPDEKYILIS 349 (954)
Q Consensus 278 ~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~-~l~~~~------~~~~~~~SpDGk~l~~~ 349 (954)
....|+++|+ +++.. .+..+. ....+++ ++++|++.
T Consensus 103 ----------------------------------~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~ 146 (328)
T 3dsm_A 103 ----------------------------------WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVN 146 (328)
T ss_dssp ----------------------------------SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEE
T ss_pred ----------------------------------CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEE
Confidence 1235888888 77543 333222 4455666 56666665
Q ss_pred eecCCcccccccCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002194 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (954)
Q Consensus 350 s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (954)
... ....|.++|+++++.. .+... ..+..+.++|||+ +++. ...+......
T Consensus 147 ~~~-----------~~~~v~viD~~t~~~~~~i~~g--------------~~p~~i~~~~dG~-l~v~-~~~~~~~~~~- 198 (328)
T 3dsm_A 147 CWS-----------YQNRILKIDTETDKVVDELTIG--------------IQPTSLVMDKYNK-MWTI-TDGGYEGSPY- 198 (328)
T ss_dssp ECT-----------TCCEEEEEETTTTEEEEEEECS--------------SCBCCCEECTTSE-EEEE-BCCBCTTCSS-
T ss_pred cCC-----------CCCEEEEEECCCCeEEEEEEcC--------------CCccceEEcCCCC-EEEE-ECCCccCCcc-
Confidence 421 1237999999866543 33221 1235688999997 3333 2111000000
Q ss_pred ccCCCeEEEEecCCCCCCCce-EEeec-ccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 429 VTPRDIIYTQQAEPVQGEGPE-ILHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 429 ~~~~~~l~~~~~~~~~g~~~~-~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
....+.|++++. .+++.. .+.-. ......++|+|||+.|++... .++++|++++
T Consensus 199 ~~~~~~v~~id~---~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~ 254 (328)
T 3dsm_A 199 GYEAPSLYRIDA---ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPVEAD 254 (328)
T ss_dssp CBCCCEEEEEET---TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEETTCS
T ss_pred ccCCceEEEEEC---CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEECCCC
Confidence 011357999995 444433 33221 224677999999999887632 5899999876
No 423
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.57 E-value=5.4e-06 Score=93.83 Aligned_cols=226 Identities=10% Similarity=0.065 Sum_probs=130.3
Q ss_pred eecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCC
Q 002194 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (954)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (954)
.+++||+.|+.... ...|.++|+.+++........... +..+.| |++.|+...
T Consensus 138 ~~~~d~~~l~~g~~---------dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~--~~~~l~sg~------------ 190 (435)
T 1p22_A 138 CLQYDDQKIVSGLR---------DNTIKIWDKNTLECKRILTGHTGS----VLCLQY--DERVIITGS------------ 190 (435)
T ss_dssp EEECCSSEEEEEES---------SSCEEEEESSSCCEEEEECCCSSC----EEEEEC--CSSEEEEEE------------
T ss_pred EEEECCCEEEEEeC---------CCeEEEEeCCCCeEEEEEcCCCCc----EEEEEE--CCCEEEEEc------------
Confidence 55669999888652 457788898888766554433322 556666 888887661
Q ss_pred CCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCce-eEcCCC-ccccccccCCCCcEEEEEee
Q 002194 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYILISSI 351 (954)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~-~~l~~~-~~~~~~~~SpDGk~l~~~s~ 351 (954)
..+.|.++|+ +|+. ..+... ..+..+.|++ ..|+..+.
T Consensus 191 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~ 231 (435)
T 1p22_A 191 -------------------------------------SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSK 231 (435)
T ss_dssp -------------------------------------TTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEET
T ss_pred -------------------------------------CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeC
Confidence 1234777788 6643 334333 6677788874 46666653
Q ss_pred cCCcccccccCCCCcceEEEeccCceEEEe-ccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccc
Q 002194 352 HRPYSFIVPCGRFPRQVGVWTTDGIFVREL-CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (954)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l-~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~ 430 (954)
+ +.+.+||+.++..... .... +....+..+.| ||+.++.. +
T Consensus 232 d-------------g~i~vwd~~~~~~~~~~~~~~----------~~~~~v~~~~~--~~~~l~s~-------------~ 273 (435)
T 1p22_A 232 D-------------RSIAVWDMASPTDITLRRVLV----------GHRAAVNVVDF--DDKYIVSA-------------S 273 (435)
T ss_dssp T-------------SCEEEEECSSSSCCEEEEEEC----------CCSSCEEEEEE--ETTEEEEE-------------E
T ss_pred C-------------CcEEEEeCCCCCCceeeeEec----------CCCCcEEEEEe--CCCEEEEE-------------e
Confidence 3 3899999985432111 1100 11123345666 67755554 3
Q ss_pred CCCeEEEEecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCC
Q 002194 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (954)
Q Consensus 431 ~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~ 510 (954)
..+.|.+|++ .++.....+..+...+..+.| +++.|+..+.++ .|.++|+.++ +.......+...+.
T Consensus 274 ~dg~i~vwd~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg----~i~iwd~~~~--~~~~~~~~h~~~v~--- 340 (435)
T 1p22_A 274 GDRTIKVWNT--STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN----TIRLWDIECG--ACLRVLEGHEELVR--- 340 (435)
T ss_dssp TTSEEEEEET--TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS----CEEEEETTTC--CEEEEECCCSSCEE---
T ss_pred CCCeEEEEEC--CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC----eEEEEECCCC--CEEEEEeCCcCcEE---
Confidence 4568899996 233333445555555666666 567777665443 3556666664 33333333332222
Q ss_pred CCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCC
Q 002194 511 GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (954)
Q Consensus 511 ~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 563 (954)
....||++++.... ...|.+||+.+++
T Consensus 341 -----~~~~~~~~l~sg~~---------------------dg~i~vwd~~~~~ 367 (435)
T 1p22_A 341 -----CIRFDNKRIVSGAY---------------------DGKIKVWDLVAAL 367 (435)
T ss_dssp -----EEECCSSEEEEEET---------------------TSCEEEEEHHHHT
T ss_pred -----EEEecCCEEEEEeC---------------------CCcEEEEECCCCC
Confidence 23347887776652 2248899986554
No 424
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.56 E-value=3.3e-06 Score=89.73 Aligned_cols=158 Identities=8% Similarity=-0.065 Sum_probs=79.2
Q ss_pred ccccccccCC---CCcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeec
Q 002194 332 AVYTSLDPSP---DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (954)
Q Consensus 332 ~~~~~~~~Sp---DGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~ws 407 (954)
.....++||| ||+.|+-.+.+ +.|.|||+++++ .+.+..+... ...+..++||
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D-------------~TIkIWDl~TGk~l~tL~g~~~~----------v~~v~~vafS 235 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIM-------------NNIVIWNLKTGQLLKKMHIDDSY----------QASVCHKAYS 235 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETT-------------SEEEEEETTTCCEEEEEECCC-------------CCCEEEEEE
T ss_pred CceeeEEeeccCCCCceEEEecCC-------------CcEEEEECCCCcEEEEEcCCCcc----------eeeeEEEEEC
Confidence 4455678888 77888888744 389999999654 5666432110 0233456899
Q ss_pred cCCCCceEEEEeccCCCcc-ccccCCCeEEEEecCCCCCCCc-eEEe--eccccc-CceeeccCCceEEEEEeccccceE
Q 002194 408 SDKPSTLYWAETQDGGDAK-VEVTPRDIIYTQQAEPVQGEGP-EILH--KLDLRY-GGISWCDDSLALVYESWYKTRRTR 482 (954)
Q Consensus 408 pDg~~i~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~g~~~-~~l~--~~~~~~-~~~~~spDg~~l~~~~~~~~~~~~ 482 (954)
|||+.++.... +.+.+. ...+....+.+|+. .+++. ..+. -.++.. ..+..+.+|..++..+.++.
T Consensus 236 pdG~~lvs~s~--~~~~w~laSGs~D~tIklWd~---~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgT---- 306 (356)
T 2w18_A 236 EMGLLFIVLSH--PCAKESESLRSPVFQLIVINP---KTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGT---- 306 (356)
T ss_dssp ETTEEEEEEC--------------CCEEEEEEET---TTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSC----
T ss_pred CCCCEEEEecc--CCCcceeeccCCCcEEEEEEC---CCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCc----
Confidence 99987665421 110010 11123446777875 33332 2111 011111 11122223445555444432
Q ss_pred EEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 483 l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
|.+.|+.++ +.......+...+.. .++|||||++|+...
T Consensus 307 IkIWDl~tG--k~l~tL~gH~~~vvs-----~vafSPDG~~LaSGS 345 (356)
T 2w18_A 307 IAIWDLLLG--QCTALLPPVSDQHWS-----FVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEEETTTC--SEEEEECCC--CCCC-----EEEECSSSSEEEEEC
T ss_pred EEEEECCCC--cEEEEecCCCCCeEE-----EEEECCCCCEEEEEE
Confidence 555566665 323333222222211 168999999998776
No 425
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.56 E-value=2e-06 Score=93.85 Aligned_cols=281 Identities=9% Similarity=-0.092 Sum_probs=132.5
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccC-CCCceEEEEEECCCCceeecccCC-Ccc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDS-SSSKLRVWVADVDTGKARPLFQSP-DIY 241 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~-~~~~~~l~~~d~~~g~~~~lt~~~-~~~ 241 (954)
.+.++|..+ .+ .+..++.+... ++.+||||++|+.+........ +.....|.++|+.+++...-...+ ...
T Consensus 47 ~vsvID~~t----~~--v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGC----GV--TLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTT----TE--EEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCC----Ce--EEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 677888643 22 22223333333 7999999999988763211100 123578999999998765443222 000
Q ss_pred c--cccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceee--ccCCceeeechh--hhhccCcccc--cccccccc
Q 002194 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQS--NEKRDIIQVRTF--QDLLKDEYDE--DLFDYYAT 313 (954)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~~--~d~l~~~~d~--~~~~~~~~ 313 (954)
+ ......+++||||++++++....... +.- -+-. . .+.+ .+......++ ..+.....
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~------------v~V~~iD~~-t--v~~i~v~~~~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAA------------AGLSVPGAS-D--DQLTKSASCFHIHPGAAATHYLGSCP 184 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCE------------EEEEETTTE-E--EEEEECSSCCCCEEEETTEEECCCCT
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCe------------EEEEEEchh-h--ceEEECCCceEEccCCCeEEEEEcCC
Confidence 0 00134789999999999872110000 000 0000 0 0000 0000000000 00111122
Q ss_pred ceEEEEEe-C-----CceeEc-CCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCC
Q 002194 314 TQLVLVSL-D-----GTVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP 385 (954)
Q Consensus 314 ~~l~~~~~-~-----G~~~~l-~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~ 385 (954)
..+..+++ + |+.... +.. .--..+..++|++.++|.+. +.+++.|+.++..+.+....
T Consensus 185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~--------------~~V~viD~~~~~~~v~~~~~ 250 (368)
T 1mda_H 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA--------------SSILQGDIPAAGATMKAAID 250 (368)
T ss_dssp TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS--------------SCCEEEECCSSCCEEECCCC
T ss_pred CCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC--------------CEEEEEECCCCcceEEEEEE
Confidence 33444555 3 221100 000 00001112677777777763 27888888754433332221
Q ss_pred CcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCc-eEEeecccccCceeec
Q 002194 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWC 464 (954)
Q Consensus 386 ~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~s 464 (954)
..............+...+.++|||+++++......+. . . ...+.+.++|+ .+.+. ..+.- .....+++|+
T Consensus 251 ~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~-~-~--~~~~~~~ViD~---~t~~vv~~i~v-g~~p~gi~~s 322 (368)
T 1mda_H 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRS-C-L--AAAENTSSVTA---SVGQTSGPISN-GHDSDAIIAA 322 (368)
T ss_dssp SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSC-T-T--SCEEEEEEEES---SSCCEEECCEE-EEEECEEEEC
T ss_pred eccccccccccccCcceeeEEcCCCCEEEEEeccccCc-c-c--ccCCCEEEEEC---CCCeEEEEEEC-CCCcceEEEC
Confidence 11000000000112233478999999876653211000 0 0 00124558885 43333 33332 2257889999
Q ss_pred cCCceEEEEEe-ccccceEEEEEcCCCC
Q 002194 465 DDSLALVYESW-YKTRRTRTWVISPGSK 491 (954)
Q Consensus 465 pDg~~l~~~~~-~~~~~~~l~~~d~~~~ 491 (954)
|||++++++.+ .. ..|.++|+.+.
T Consensus 323 ~Dg~~l~va~~~~~---~~VsVID~~t~ 347 (368)
T 1mda_H 323 QDGASDNYANSAGT---EVLDIYDAASD 347 (368)
T ss_dssp CSSSCEEEEEETTT---TEEEEEESSSC
T ss_pred CCCCEEEEEccCCC---CeEEEEECCCC
Confidence 99999988876 34 46999999885
No 426
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.56 E-value=5.3e-08 Score=113.36 Aligned_cols=128 Identities=17% Similarity=0.126 Sum_probs=84.1
Q ss_pred EEEEEEcCCCCCCC-CCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC-CcEEEEcCCCCC-CCCCC
Q 002194 652 LSATLYLPPGYDPS-KDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPI-IGEGD 728 (954)
Q Consensus 652 l~~~l~~P~~~~~~-~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V~~~~~~~~-~G~G~ 728 (954)
+...+|.|...... ...++|+|||+|||.|..+... .+. ...|+++ |++|+..+|+-. .|+..
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~--------~~~------~~~la~~~~~vvv~~~YRl~~~Gfl~ 177 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGN--------LYD------GSVLASYGNVIVITVNYRLGVLGFLS 177 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGG--------GSC------CHHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCC--------ccC------chhhhccCCEEEEEeCCcCcccccCc
Confidence 55678888753211 1235899999999976654321 121 1245654 699999888632 12211
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhCC---CcccEEEEeccC
Q 002194 729 EEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGA 793 (954)
Q Consensus 729 ~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~ 793 (954)
.......+...+.|+.+|++|+.++ ...||++|.|+|+|+||.++..++.... .+|+.+|+.+|.
T Consensus 178 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 178 TGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 1111112245689999999999986 2379999999999999999998886543 569999998863
No 427
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.55 E-value=4.3e-06 Score=90.68 Aligned_cols=230 Identities=11% Similarity=0.069 Sum_probs=128.4
Q ss_pred ceEEEEccCCCCCCce-eeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCc-c
Q 002194 164 GIGIHQLFPDGKLGQE-IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI-Y 241 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~-~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~-~ 241 (954)
.|.++|..+ ++. ..+. .......++++||| +|+.+.. ....|+++|+++++.......+.. .
T Consensus 65 ~v~viD~~t----~~~~~~i~---~~~~p~~i~~~~~g-~lyv~~~--------~~~~v~~iD~~t~~~~~~i~~g~~~~ 128 (328)
T 3dsm_A 65 VIFAIDINT----FKEVGRIT---GFTSPRYIHFLSDE-KAYVTQI--------WDYRIFIINPKTYEITGYIECPDMDM 128 (328)
T ss_dssp EEEEEETTT----CCEEEEEE---CCSSEEEEEEEETT-EEEEEEB--------SCSEEEEEETTTTEEEEEEECTTCCT
T ss_pred EEEEEECcc----cEEEEEcC---CCCCCcEEEEeCCC-eEEEEEC--------CCCeEEEEECCCCeEEEEEEcCCccc
Confidence 688888753 332 3443 23356778899998 5544321 256899999998876543222220 0
Q ss_pred ccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe
Q 002194 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (954)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~ 321 (954)
.......+++ +++.|+++.. . ....|.++|+
T Consensus 129 ~~~~p~~i~~--~~~~lyv~~~--------------------------------------~---------~~~~v~viD~ 159 (328)
T 3dsm_A 129 ESGSTEQMVQ--YGKYVYVNCW--------------------------------------S---------YQNRILKIDT 159 (328)
T ss_dssp TTCBCCCEEE--ETTEEEEEEC--------------------------------------T---------TCCEEEEEET
T ss_pred cCCCcceEEE--ECCEEEEEcC--------------------------------------C---------CCCEEEEEEC
Confidence 0001345666 4555665410 0 1245888998
Q ss_pred -CCcee-EcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCcccccccc
Q 002194 322 -DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRK 399 (954)
Q Consensus 322 -~G~~~-~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~ 399 (954)
+++.. .+........+.++|||+ +++........ .++..-...|+++|.+++++......+.. .
T Consensus 160 ~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~--~~~~~~~~~v~~id~~t~~v~~~~~~~~g-----------~ 225 (328)
T 3dsm_A 160 ETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEG--SPYGYEAPSLYRIDAETFTVEKQFKFKLG-----------D 225 (328)
T ss_dssp TTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTT--CSSCBCCCEEEEEETTTTEEEEEEECCTT-----------C
T ss_pred CCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccC--CccccCCceEEEEECCCCeEEEEEecCCC-----------C
Confidence 77543 343334556788999998 44444221100 00001124799999987665432221110 1
Q ss_pred CccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCce--E-EeecccccCceeeccCCceEEEEEec
Q 002194 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE--I-LHKLDLRYGGISWCDDSLALVYESWY 476 (954)
Q Consensus 400 g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~--~-l~~~~~~~~~~~~spDg~~l~~~~~~ 476 (954)
.+..++|+|||+.+++. .. .|+++|. ++++.. . +.........++++|++..|+.+...
T Consensus 226 ~p~~la~~~d~~~lyv~-------------~~--~v~~~d~---~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~ 287 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWI-------------NN--DIWRMPV---EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAI 287 (328)
T ss_dssp CCEEEEECTTSCEEEEE-------------SS--SEEEEET---TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECT
T ss_pred CceeEEEecCCCEEEEE-------------cc--EEEEEEC---CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccc
Confidence 34679999999977665 11 7889985 444331 1 11112345678999987777776411
Q ss_pred c-ccceEEEEEcCCC
Q 002194 477 K-TRRTRTWVISPGS 490 (954)
Q Consensus 477 ~-~~~~~l~~~d~~~ 490 (954)
+ .....|++++.++
T Consensus 288 ~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 288 DYQQQGIVYRYSPQG 302 (328)
T ss_dssp TSSSEEEEEEECTTC
T ss_pred ccccCCEEEEECCCC
Confidence 0 1125788888873
No 428
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.55 E-value=3.3e-06 Score=95.42 Aligned_cols=151 Identities=13% Similarity=0.133 Sum_probs=91.6
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCC-----ce------eecccCCCccccccccceeEecC-Ce
Q 002194 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-----KA------RPLFQSPDIYLNAIFDNFVWVNN-ST 256 (954)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g-----~~------~~lt~~~~~~~~~~~~~~~wspD-G~ 256 (954)
..+...+|||||++|+..... +.....|.++|++++ +. ..+.... ...+..++|+|+ ++
T Consensus 93 ~~v~~l~~spdg~~lav~~~s-----gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h----~~~V~~v~~~p~~~~ 163 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMS-----SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA----GGMVIDMKWNPTVPS 163 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEE-----TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG----GGSEEEEEECSSCTT
T ss_pred CcccEEEEcCCCCEEEEEEec-----cCCCceEEEEEccccccCCcCCcceeeeeeccCCC----CCceEEEEECCCCCC
Confidence 358889999999999863210 334567778887653 11 1111111 222778999998 67
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeE-cCCC-cc
Q 002194 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPP-AV 333 (954)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~-l~~~-~~ 333 (954)
.|+... ....|.++|+ ++.... .... ..
T Consensus 164 ~las~s-------------------------------------------------~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 164 MVAVCL-------------------------------------------------ADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp EEEEEE-------------------------------------------------TTSCEEEEEESSSEEEEEEECGGGC
T ss_pred EEEEEE-------------------------------------------------CCCeEEEEEcCCCcceeeccCCCCc
Confidence 777551 1234677787 553221 2222 56
Q ss_pred ccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002194 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (954)
Q Consensus 334 ~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i 413 (954)
+..++|||||++|+..+.+ +.+.+||+++...+.+........ .....+..+.|++++..+
T Consensus 195 v~~v~wspdg~~lasgs~d-------------g~v~iwd~~~~~~~~~~~~~~~~~------~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQN-------------GTVVQYLPTLQEKKVIPCPPFYES------DHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEEEEECTTSSCEEEEETT-------------SCEEEECTTCCEEEEECCCTTCCT------TSCEEEEEEEEEETTEEE
T ss_pred eeEEEEcCCCCEEEEEcCC-------------CcEEEEccCCcccccccCCcccCC------CCceeEEEEEEecCceEE
Confidence 7889999999999988743 389999998555444433221100 001245678999988655
Q ss_pred eEE
Q 002194 414 LYW 416 (954)
Q Consensus 414 ~~~ 416 (954)
+..
T Consensus 256 ~~~ 258 (434)
T 2oit_A 256 IVY 258 (434)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 429
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.54 E-value=3e-06 Score=95.71 Aligned_cols=105 Identities=6% Similarity=0.040 Sum_probs=68.7
Q ss_pred ccccccccCCC-CcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCC
Q 002194 332 AVYTSLDPSPD-EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (954)
Q Consensus 332 ~~~~~~~~SpD-Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg 410 (954)
..+..++|+|+ ++.|+..+.+ +.+.+||+..+....... +....+..++|+|||
T Consensus 150 ~~V~~v~~~p~~~~~las~s~D-------------g~v~iwD~~~~~~~~~~~------------~~~~~v~~v~wspdg 204 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLAD-------------GSIAVLQVTETVKVCATL------------PSTVAVTSVCWSPKG 204 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETT-------------SCEEEEEESSSEEEEEEE------------CGGGCEEEEEECTTS
T ss_pred CceEEEEECCCCCCEEEEEECC-------------CeEEEEEcCCCcceeecc------------CCCCceeEEEEcCCC
Confidence 66788999998 6777776633 389999998663321111 111345789999999
Q ss_pred CCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-------ccccCceeeccCCceEEEEEecc
Q 002194 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-------DLRYGGISWCDDSLALVYESWYK 477 (954)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-------~~~~~~~~~spDg~~l~~~~~~~ 477 (954)
+.|+.. +..+.|.+|+. .+.....+... ...+..+.|++++..++.....+
T Consensus 205 ~~lasg-------------s~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d 262 (434)
T 2oit_A 205 KQLAVG-------------KQNGTVVQYLP---TLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD 262 (434)
T ss_dssp SCEEEE-------------ETTSCEEEECT---TCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT
T ss_pred CEEEEE-------------cCCCcEEEEcc---CCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC
Confidence 988766 34557889986 43323333222 12567799999998876655443
No 430
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.53 E-value=4.9e-07 Score=93.47 Aligned_cols=162 Identities=12% Similarity=0.026 Sum_probs=90.4
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC---CCcccE
Q 002194 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFCC 786 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~---p~~~~a 786 (954)
..+|.|+..+ ..|++. ..+++.+.++.+ . ...++.++||||||.+|..++.+. ++.+++
T Consensus 46 ~~~~~v~~~d---~~g~~~----------~~~~~~~~i~~~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~ 107 (244)
T 2cb9_A 46 NHKAAVYGFH---FIEEDS----------RIEQYVSRITEI---Q--PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSD 107 (244)
T ss_dssp TTTSEEEEEC---CCCSTT----------HHHHHHHHHHHH---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCceEEEEc---CCCHHH----------HHHHHHHHHHHh---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccE
Confidence 4689999944 444432 234444444433 1 125799999999999999998764 467888
Q ss_pred EEEeccCCCCCCCC-CCCcccc----chh----h-hcHHHHHhcCc-ccccCCCCCCEEEEEeC--CCCCCCCchHHHHH
Q 002194 787 GIARSGAYNRTLTP-FGFQNED----RTL----W-EATSTYVEMSP-FMSANKLKKPILLVHGE--EDNNSGTLTMQSDR 853 (954)
Q Consensus 787 ~v~~~~~~~~~~~~-~~~~~~~----~~~----~-~~~~~~~~~sp-~~~~~~~~~P~Lii~G~--~D~~v~~~~~~~~~ 853 (954)
+|.+++........ ....... ... + .....+..+.. .....++++|+++++|+ .|.. + ......
T Consensus 108 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~--~~~~~~ 184 (244)
T 2cb9_A 108 FIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRCYQEYWAQLINEGRIKSNIHFIEAGIQTETS-G--AMVLQK 184 (244)
T ss_dssp EEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHHHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-H--HHHTTS
T ss_pred EEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCCEEEEEccCccccc-c--ccchhH
Confidence 88887643210000 0000000 000 0 00011111111 12346788999999999 8863 3 333222
Q ss_pred HHHHHHhCCCcEEEEEeCCCCC--cCCCcccHHHHHHHHHHHHHHh
Q 002194 854 FFNALKGHGALCRLVILPFESH--GYAARESIMHVLWETDRWLQKY 897 (954)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H--~~~~~~~~~~~~~~i~~fl~~~ 897 (954)
+.+ ....+++++.+|+ +| .+ ..+....+.+.|.+||.+.
T Consensus 185 w~~---~~~~~~~~~~i~g-gH~~~~-~~~~~~~~~~~i~~~L~~~ 225 (244)
T 2cb9_A 185 WQD---AAEEGYAEYTGYG-AHKDML-EGEFAEKNANIILNILDKI 225 (244)
T ss_dssp SGG---GBSSCEEEEECSS-BGGGTT-SHHHHHHHHHHHHHHHHTC
T ss_pred HHH---hcCCCCEEEEecC-ChHHHc-ChHHHHHHHHHHHHHHhcC
Confidence 211 1123589999997 89 44 3455667777788887654
No 431
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.51 E-value=4.2e-06 Score=90.78 Aligned_cols=120 Identities=13% Similarity=0.093 Sum_probs=65.9
Q ss_pred ccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc-CceEEEeccCCCcccCCccccccccCccceeeccCCCC
Q 002194 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (954)
Q Consensus 334 ~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~-g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~ 412 (954)
..+++++||+..|+++... ...|.+|+.+ |+..+.+...... .++..++|+| |
T Consensus 198 p~gia~d~~~g~l~v~d~~------------~~~I~~~~~~~G~~~~~~~~~~~~-----------~~~~~~~~~p-g-- 251 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE------------NGRIQCFKTDTKEFVREIKHASFG-----------RNVFAISYIP-G-- 251 (329)
T ss_dssp EEEEEEETTTTEEEEEETT------------TTEEEEEETTTCCEEEEECCTTTT-----------TCEEEEEEET-T--
T ss_pred CcEEEEECCCCEEEEEECC------------CCEEEEEECCCCcEEEEEeccccC-----------CCcceeeecC-C--
Confidence 5678999996666665522 2379999998 5555555432111 2345678888 3
Q ss_pred ceEEEEeccCCCccccccCCCeEEEEecCCCCCCCce-EEe---ecccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-ILH---KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~-~l~---~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
++|..+. ... +.......+++++. ..++.. .+. .......+++++||| .|+.+...+ .+|+++++
T Consensus 252 ~~~~~~g---~~~-v~~~~~~~v~~~~~---~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~---~~I~~~~~ 320 (329)
T 3fvz_A 252 FLFAVNG---KPY-FGDQEPVQGFVMNF---SSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHT---NTVWKFTL 320 (329)
T ss_dssp EEEEEEC---CCC-TTCSCCCCEEEEET---TTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSS---CCEEEEEE
T ss_pred EEEEeCC---CEE-eccCCCcEEEEEEc---CCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCC---CEEEEEeC
Confidence 3444221 110 11123457888885 334433 322 122335678999999 555553333 34666665
Q ss_pred CC
Q 002194 489 GS 490 (954)
Q Consensus 489 ~~ 490 (954)
++
T Consensus 321 ~~ 322 (329)
T 3fvz_A 321 TE 322 (329)
T ss_dssp EE
T ss_pred Cc
Confidence 44
No 432
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.50 E-value=4.1e-06 Score=95.16 Aligned_cols=260 Identities=11% Similarity=-0.043 Sum_probs=131.7
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceee-c-CCCCeEEEEEeec-----c----ccCCCCceEEEEEECCCCcee
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTW-S-QDGKHLAFSIRID-----A----EDSSSSKLRVWVADVDTGKAR 232 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~w-S-PDG~~iaf~~~~~-----~----~~~~~~~~~l~~~d~~~g~~~ 232 (954)
.|.+.++.. .+..++..++.+......++ + |||++|+...+.. + .........+-++|.++.+..
T Consensus 113 rVavIdl~t----~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 113 RVARVRCDV----MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp EEEEEETTT----TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred EEEEEECCC----ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE
Confidence 577888744 44444445665555566666 5 9999985543210 0 011233567889999987653
Q ss_pred ecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCC----ceeeec-hhhhhccCcccccc
Q 002194 233 PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKR----DIIQVR-TFQDLLKDEYDEDL 307 (954)
Q Consensus 233 ~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~r-~~~d~l~~~~d~~~ 307 (954)
.-...+.. ...++.+|||+++|++......... +...... ..+..+ ..... -.+++.
T Consensus 189 ~qI~Vgg~-----pd~~~~spdGk~~~vt~~~se~~~~----------i~~~~~~~~d~v~V~~~~~~~~~---v~~Gk~ 250 (595)
T 1fwx_A 189 WQVLVSGN-----LDNCDADYEGKWAFSTSYNSEKGMT----------LPEMTAAEMDHIVVFNIAEIEKA---IAAGDY 250 (595)
T ss_dssp EEEEESSC-----CCCEEECSSSSEEEEEESCTTCCSS----------HHHHTCCSEEEEEEEEHHHHHHH---HHHTCS
T ss_pred EEEEeCCC-----ccceEECCCCCEEEEEecCcccCcc----------hhhccccccceEEEeeccceeEe---ccCCCe
Confidence 22221121 4578899999999988433221100 0000000 000000 00000 011111
Q ss_pred ccccccceEEEEEe-C--Cc--eeEcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEec
Q 002194 308 FDYYATTQLVLVSL-D--GT--VKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELC 382 (954)
Q Consensus 308 ~~~~~~~~l~~~~~-~--G~--~~~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~ 382 (954)
.+ -..+.++|. + +. ...+..+.....+.+|||||+++.+.... ..+.++|++..+.. .
T Consensus 251 -~~--i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s------------~~VsVid~~~~~~~--~ 313 (595)
T 1fwx_A 251 -QE--LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS------------PTVTVLDVTRFDAV--F 313 (595)
T ss_dssp -EE--ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS------------SBEEEEEGGGHHHH--H
T ss_pred -eE--ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC------------CeEEEEECcccccc--c
Confidence 11 134778888 5 42 23444335566789999999998876433 38899998843200 0
Q ss_pred cCCCc-ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCC----CCCC-ceEEe--ec
Q 002194 383 DLPLA-EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPV----QGEG-PEILH--KL 454 (954)
Q Consensus 383 ~~~~~-~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~g~~-~~~l~--~~ 454 (954)
..... ..........-.|++.++|+||| .+|.+... .++|.+|+++.. .|.+ ...+. ..
T Consensus 314 ~~~l~~~~~v~~~v~vG~gP~h~aF~~dG--~aY~t~~l-----------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV 380 (595)
T 1fwx_A 314 YENADPRSAVVAEPELGLGPLHTAFDGRG--NAYTSLFL-----------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDV 380 (595)
T ss_dssp HSCCCGGGGEEECCBCCSCEEEEEECTTS--EEEEEETT-----------TTEEEEEEHHHHHHHHHTCSCCCEEEEEEC
T ss_pred ccccCcccceEEEcCCCCCcceEEECCCC--eEEEEEec-----------CCcEEEEEhhHhhhhhcccccceeEEEeec
Confidence 00000 00000000122467889999999 46664433 346777876220 1111 11221 11
Q ss_pred ccc------cCceeeccCCceEEEEEe
Q 002194 455 DLR------YGGISWCDDSLALVYESW 475 (954)
Q Consensus 455 ~~~------~~~~~~spDg~~l~~~~~ 475 (954)
... ..+...+|||++|+....
T Consensus 381 ~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 381 HYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp SSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ccccccceeccceEeCCCCCEEEEcCC
Confidence 111 134677999999977643
No 433
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.49 E-value=2.2e-05 Score=87.76 Aligned_cols=201 Identities=10% Similarity=0.021 Sum_probs=120.3
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
....++|+|||+ |+++. .....|++++++++....+...... .. ++|+|||+.|+++..
T Consensus 132 ~P~~la~d~~g~-lyv~d--------~~~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~~l~~~d~------ 190 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQ--------RDDPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQRVYSIGW------ 190 (409)
T ss_dssp CEEEEEECSTTE-EEEEE--------TTTTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSSEEEEEBS------
T ss_pred CceEEEEeCCCC-EEEEe--------cCCCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCCcEEEEec------
Confidence 456678999997 55542 1357899999998887766543322 33 899999998887610
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEc----C-CCccccccccCCC
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEI----G-PPAVYTSLDPSPD 342 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l----~-~~~~~~~~~~SpD 342 (954)
. +...|+.++. ++. .+.+ . ......+++++|+
T Consensus 191 ---------------~--------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 191 ---------------E--------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp ---------------S--------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred ---------------C--------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 0 1125888888 443 2333 2 2255678899997
Q ss_pred CcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCcc-ceeeccCCCCceEEEEecc
Q 002194 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMR-SINWRSDKPSTLYWAETQD 421 (954)
Q Consensus 343 Gk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~-~~~wspDg~~i~~~~~~~~ 421 (954)
+..|++.. . .+.|+.++.+++....+........ ....+. .++|+|++..+++. +
T Consensus 230 ~g~lyv~d-~------------~~~I~~~d~~~~~~~~~~~~~~~g~-------~~~~P~~~ia~~p~~g~lyv~-d--- 285 (409)
T 3hrp_A 230 EEWLYFVD-S------------NKNFGRFNVKTQEVTLIKQLELSGS-------LGTNPGPYLIYYFVDSNFYMS-D--- 285 (409)
T ss_dssp SSEEEEEC-T------------TCEEEEEETTTCCEEEEEECCCCSC-------CCCSSCCEEEEETTTTEEEEE-E---
T ss_pred CCeEEEEE-C------------CCcEEEEECCCCCEEEEecccccCC-------CCCCccccEEEeCCCCEEEEE-e---
Confidence 66777743 2 2378999998776544422111100 001123 79999976655443 2
Q ss_pred CCCccccccCCCeEEEEecCCCCCCCceEEeecc---------------cccCceeeccCCceEEEEEeccccceEEEEE
Q 002194 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---------------LRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~---------------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (954)
...+.|++++. ++. ...+.... ....+++++|||+ |+++....+ .+|+++
T Consensus 286 --------~~~~~I~~~~~---~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~--~~I~~~ 350 (409)
T 3hrp_A 286 --------QNLSSVYKITP---DGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKG--YCLRKL 350 (409)
T ss_dssp --------TTTTEEEEECT---TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTT--CEEEEE
T ss_pred --------CCCCEEEEEec---CCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCC--CEEEEE
Confidence 22457888874 433 33332221 1245689999998 555532033 578999
Q ss_pred cCCCC
Q 002194 487 SPGSK 491 (954)
Q Consensus 487 d~~~~ 491 (954)
++.++
T Consensus 351 ~~~~G 355 (409)
T 3hrp_A 351 DILDG 355 (409)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 96554
No 434
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.48 E-value=1.8e-05 Score=82.78 Aligned_cols=193 Identities=8% Similarity=-0.060 Sum_probs=111.5
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
....++++|||+ |+++. . ...|++++.+++....+....... ...+++++||+ |+++..
T Consensus 68 ~p~~i~~~~~g~-l~v~~-------~--~~~i~~~d~~~~~~~~~~~~~~~~----p~~i~~~~~g~-l~v~~~------ 126 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYVTD-------F--NNRVVTLAAGSNNQTVLPFDGLNY----PEGLAVDTQGA-VYVADR------ 126 (270)
T ss_dssp SCCCEEECTTCC-EEEEE-------T--TTEEEEECTTCSCCEECCCCSCSS----EEEEEECTTCC-EEEEEG------
T ss_pred CcceeEECCCCC-EEEEc-------C--CCEEEEEeCCCceEeeeecCCcCC----CcceEECCCCC-EEEEEC------
Confidence 567789999998 55532 1 458999998887655443221111 45788899997 444300
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC--ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~--~~~~~~~~SpDGk~l 346 (954)
....|++++. +......... .....++++|||+ |
T Consensus 127 ------------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 163 (270)
T 1rwi_B 127 ------------------------------------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-V 163 (270)
T ss_dssp ------------------------------------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-E
T ss_pred ------------------------------------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-E
Confidence 2234677765 3333222222 3567789999998 4
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
+++... ...|++++.++........... ..+..+++++||. +++. +
T Consensus 164 ~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~d~~g~-l~v~-~-------- 209 (270)
T 1rwi_B 164 YVTDTD------------NNRVVKLEAESNNQVVLPFTDI------------TAPWGIAVDEAGT-VYVT-E-------- 209 (270)
T ss_dssp EEEEGG------------GTEEEEECTTTCCEEECCCSSC------------CSEEEEEECTTCC-EEEE-E--------
T ss_pred EEEECC------------CCEEEEEecCCCceEeecccCC------------CCceEEEECCCCC-EEEE-E--------
Confidence 444322 1278889988765443221110 2345788999983 3332 2
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEeec-ccccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
...+.|++++. ++.....+... ......+++++||+ |+++...+ .+|.+++...
T Consensus 210 ---~~~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~---~~v~~~~~~~ 264 (270)
T 1rwi_B 210 ---HNTNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN---DRVVKLTSLE 264 (270)
T ss_dssp ---TTTSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG---TEEEEECCCG
T ss_pred ---CCCCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCC-EEEEECCC---CEEEEEcCCC
Confidence 12346888884 44444333222 23456789999996 55554333 4677777665
No 435
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.47 E-value=6.8e-07 Score=97.02 Aligned_cols=170 Identities=11% Similarity=0.013 Sum_probs=93.8
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh---CCCcccE
Q 002194 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH---APHLFCC 786 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~---~p~~~~a 786 (954)
..+|.|+. .+..|+|.+...........+++.+.+..+. ...++.++||||||.++..++.+ .|++++.
T Consensus 125 ~~~~~v~~---~d~~g~~~~~~~~~~~~~~a~~~~~~i~~~~-----~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~ 196 (329)
T 3tej_A 125 DPQWSIIG---IQSPRPNGPMQTAANLDEVCEAHLATLLEQQ-----PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAF 196 (329)
T ss_dssp CTTCEEEE---ECCCTTTSHHHHCSSHHHHHHHHHHHHHHHC-----SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCeEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccE
Confidence 46899999 5556776654333334555555555444331 22489999999999999999998 8999999
Q ss_pred EEEeccCCCCC----CC-CCCCcccc--------------------chhhhc-HHHHHhc-C--cccccCCCCCCEEEEE
Q 002194 787 GIARSGAYNRT----LT-PFGFQNED--------------------RTLWEA-TSTYVEM-S--PFMSANKLKKPILLVH 837 (954)
Q Consensus 787 ~v~~~~~~~~~----~~-~~~~~~~~--------------------~~~~~~-~~~~~~~-s--p~~~~~~~~~P~Lii~ 837 (954)
+|++.+..... .. ...+.... ....+. ...+... . .......+.+|++++.
T Consensus 197 lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 276 (329)
T 3tej_A 197 LGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFV 276 (329)
T ss_dssp EEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEE
T ss_pred EEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEE
Confidence 99887643210 00 00000000 000000 0001000 0 0011235678999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCCcC-CCcccHHHHHHHHHHHH
Q 002194 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY-AARESIMHVLWETDRWL 894 (954)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~-~~~~~~~~~~~~i~~fl 894 (954)
|+.|..++ ......+.. .-.+++++.+++ +|.. ...+....+...+.+||
T Consensus 277 ~~~d~~~~--~~~~~~w~~----~~~~~~~~~v~g-~H~~~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 277 AERTLQEG--MSPERAWSP----WIAELDIYRQDC-AHVDIISPGTFEKIGPIIRATL 327 (329)
T ss_dssp EGGGCCTT--CCHHHHHTT----TEEEEEEEEESS-CGGGGGSTTTHHHHHHHHHHHH
T ss_pred eccCCCCC--CCchhhHHH----hcCCcEEEEecC-ChHHhCCChHHHHHHHHHHHHh
Confidence 99998775 443333322 223578888985 7763 23333344444455544
No 436
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.47 E-value=1.5e-05 Score=84.30 Aligned_cols=193 Identities=13% Similarity=0.116 Sum_probs=106.0
Q ss_pred cccceeec-CCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 190 KLNFVTWS-QDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 190 ~~~~~~wS-PDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
.....+++ ++| .|+++.. .+...|++++.++...+.+...... ....++++|||++++.. .
T Consensus 78 ~p~~i~~~~~~g-~l~v~~~-------~~~~~i~~~d~~g~~~~~~~~~~~~----~~~~i~~~~~g~l~v~~-~----- 139 (286)
T 1q7f_A 78 YPNRVAVVRNSG-DIIVTER-------SPTHQIQIYNQYGQFVRKFGATILQ----HPRGVTVDNKGRIIVVE-C----- 139 (286)
T ss_dssp SEEEEEEETTTT-EEEEEEC-------GGGCEEEEECTTSCEEEEECTTTCS----CEEEEEECTTSCEEEEE-T-----
T ss_pred CceEEEEEcCCC-eEEEEcC-------CCCCEEEEECCCCcEEEEecCccCC----CceEEEEeCCCCEEEEE-C-----
Confidence 34566774 565 4555431 1246789999665444433221111 14578899999744422 0
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCc-eeEcCC--C-ccccccccCCCCc
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGP--P-AVYTSLDPSPDEK 344 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~-~~~l~~--~-~~~~~~~~SpDGk 344 (954)
....|++++.+|+ ...+.. . .....++++|||+
T Consensus 140 -------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 140 -------------------------------------------KVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred -------------------------------------------CCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 1234777776553 333321 2 4467789999998
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
|+++... ...|++|+.++.....+.... ....+..+++++||+ +++. +
T Consensus 177 -l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g-----------~~~~p~~i~~d~~G~-l~v~-~------ 224 (286)
T 1q7f_A 177 -IFISDNR------------AHCVKVFNYEGQYLRQIGGEG-----------ITNYPIGVGINSNGE-ILIA-D------ 224 (286)
T ss_dssp -EEEEEGG------------GTEEEEEETTCCEEEEESCTT-----------TSCSEEEEEECTTCC-EEEE-E------
T ss_pred -EEEEECC------------CCEEEEEcCCCCEEEEEccCC-----------ccCCCcEEEECCCCC-EEEE-e------
Confidence 3333311 127999998877665554311 012345789999995 3332 1
Q ss_pred ccccccCCC-eEEEEecCCCCCCCceEEeeccc--ccCceeeccCCceEEEEEeccccceEEEEE
Q 002194 425 AKVEVTPRD-IIYTQQAEPVQGEGPEILHKLDL--RYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (954)
Q Consensus 425 ~~~~~~~~~-~l~~~~~~~~~g~~~~~l~~~~~--~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (954)
...+ .|.+++. ++.....+..... .+..++++|||+ |+++. .+ ....+|.+
T Consensus 225 -----~~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs~-~~-~~v~v~~~ 278 (286)
T 1q7f_A 225 -----NHNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDDGS-VVLAS-KD-YRLYIYRY 278 (286)
T ss_dssp -----CSSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETTTE-EEEEE-TT-TEEEEEEC
T ss_pred -----CCCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECCCCc-EEEEC-CC-CeEEEEEc
Confidence 1233 7888884 5544444443322 245789999997 44443 33 22445544
No 437
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.47 E-value=1e-05 Score=86.80 Aligned_cols=247 Identities=13% Similarity=0.088 Sum_probs=127.2
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecC-CeEEEEEecCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN-STLLVCTIPLLRGD 268 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD-G~~l~~~~~~~~~~ 268 (954)
....++|++||+ |+++.... ...+.....|+++++++++.+.+...........+..+.+++| |++++..
T Consensus 19 ~~~~~~~~~~g~-l~~~~~~~-~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~------- 89 (314)
T 1pjx_A 19 GAEGPVFDKNGD-FYIVAPEV-EVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD------- 89 (314)
T ss_dssp TCEEEEECTTSC-EEEEETTC-EETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-------
T ss_pred CccCceECCCCC-EEEEEecc-ccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-------
Confidence 456789999995 55541000 0001124579999988888766543100000111457889999 7644433
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEc-CCC------ccccccccCC
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEI-GPP------AVYTSLDPSP 341 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l-~~~------~~~~~~~~Sp 341 (954)
....|++++.+|+.+.+ ... .....++++|
T Consensus 90 -------------------------------------------~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~ 126 (314)
T 1pjx_A 90 -------------------------------------------MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY 126 (314)
T ss_dssp -------------------------------------------TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECT
T ss_pred -------------------------------------------CCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECC
Confidence 11247778876665555 321 2356788999
Q ss_pred CCcEEEEEeecCC--cccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeec----cCCCCceE
Q 002194 342 DEKYILISSIHRP--YSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR----SDKPSTLY 415 (954)
Q Consensus 342 DGk~l~~~s~~~~--~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~ws----pDg~~i~~ 415 (954)
||+..+....... .............++.++.+ ++.+.+.... .....++|+ |||+.+++
T Consensus 127 ~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~~i~~~~~~d~dg~~l~v 192 (314)
T 1pjx_A 127 EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-------------QFPNGIAVRHMNDGRPYQLIV 192 (314)
T ss_dssp TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-------------SSEEEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-------------CCcceEEEecccCCCCCEEEE
Confidence 9975444332100 00000000112367777776 3333332110 123468899 99985544
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCCce---EEeecc----cccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE---ILHKLD----LRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~---~l~~~~----~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
. + ...+.|++++. ...++.. .+.... .....+++++||+ |+++...+ ..|++++.
T Consensus 193 ~-~-----------~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~---~~i~~~d~ 254 (314)
T 1pjx_A 193 A-E-----------TPTKKLWSYDI--KGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGS---SHIEVFGP 254 (314)
T ss_dssp E-E-----------TTTTEEEEEEE--EETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETT---TEEEEECT
T ss_pred E-E-----------CCCCeEEEEEC--CCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCC---CEEEEEcC
Confidence 3 1 12457888875 1122211 121111 3356688999996 44333222 36889998
Q ss_pred CCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEE
Q 002194 489 GSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (954)
Q Consensus 489 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (954)
+++. ....+ ..+...+.+ +.++|||++|+...
T Consensus 255 ~~g~-~~~~~-~~~~~~~~~------i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 255 DGGQ-PKMRI-RCPFEKPSN------LHFKPQTKTIFVTE 286 (314)
T ss_dssp TCBS-CSEEE-ECSSSCEEE------EEECTTSSEEEEEE
T ss_pred CCCc-EeEEE-eCCCCCcee------EEECCCCCEEEEEe
Confidence 8542 12222 222122222 67889998776665
No 438
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.47 E-value=6.5e-07 Score=99.87 Aligned_cols=85 Identities=18% Similarity=0.095 Sum_probs=66.6
Q ss_pred HHHH-CCcEEEEcCCCCCCCCCCcccch--h----------hHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEeeChHHHH
Q 002194 707 LWLA-RGFAILGGPTTPIIGEGDEEAND--R----------FVEQLVACAEAAVEEVVRRG-VAHPSKIAVGGHSYGAFM 772 (954)
Q Consensus 707 ~la~-~G~~V~~~~~~~~~G~G~~~~~~--~----------~~~~~~~D~~~av~~l~~~~-~~d~~ri~l~G~S~GG~~ 772 (954)
.+|. .|+.|+. .+.+|||++.... . ...+.++|+...++++.... .....++.++||||||.+
T Consensus 63 ~lA~~~~~~Vi~---~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~l 139 (446)
T 3n2z_B 63 DVAEELKAMLVF---AEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGML 139 (446)
T ss_dssp HHHHHHTEEEEE---ECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHH
T ss_pred HHHHHhCCcEEE---EecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHH
Confidence 4454 5889999 6777888884321 1 15678999999999998752 223358999999999999
Q ss_pred HHHHHHhCCCcccEEEEeccCC
Q 002194 773 TANLLAHAPHLFCCGIARSGAY 794 (954)
Q Consensus 773 a~~~a~~~p~~~~a~v~~~~~~ 794 (954)
|++++.++|+++.++|+.++..
T Consensus 140 A~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 140 AAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHHHhhhccccEEEEeccch
Confidence 9999999999999999877554
No 439
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.46 E-value=8.4e-07 Score=95.19 Aligned_cols=106 Identities=16% Similarity=0.097 Sum_probs=73.3
Q ss_pred ccEEEEECCCCCcCcccCccccCCC-CCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSP-NEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~ 748 (954)
.|.||++||....... +.. ..| ......|+++||.|+. .+..|+|.+...........+|+.++++
T Consensus 8 ~~~vVlvHG~~~~~~~------~~~~~~w----~~l~~~L~~~G~~V~~---~d~~g~g~s~~~~~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 8 RYPIILVHGLTGTDKY------AGVLEYW----YGIQEDLQQRGATVYV---ANLSGFQSDDGPNGRGEQLLAYVKTVLA 74 (320)
T ss_dssp SSCEEEECCTTCCSEE------TTTEESS----TTHHHHHHHTTCCEEE---CCCCSSCCSSSTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCccc------cchHHHH----HHHHHHHHhCCCEEEE---EcCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4678999996322100 000 112 2356788899999999 5666777764433334455555555544
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCC
Q 002194 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (954)
Q Consensus 749 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (954)
.+ +.+++.++||||||.++..++.++|++++++|.+++..
T Consensus 75 ~~------~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 75 AT------GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HH------CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred Hh------CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 43 34689999999999999999999999999999999753
No 440
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.44 E-value=2.3e-05 Score=81.94 Aligned_cols=195 Identities=10% Similarity=-0.008 Sum_probs=106.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
....++++|||+ |+++.+ .....|++++..++....+...... ....+++++||+ |+++.
T Consensus 25 ~p~~i~~~~~g~-l~v~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~----~p~~i~~~~~g~-l~v~~------- 84 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSE-------GMYGRVVKLATGSTGTTVLPFNGLY----QPQGLAVDGAGT-VYVTD------- 84 (270)
T ss_dssp CEEEEEECTTCC-EEEEEC-------SSSCEEEEECC-----EECCCCSCC----SCCCEEECTTCC-EEEEE-------
T ss_pred CccceEECCCCC-EEEEcc-------CCCCcEEEecCCCcccceEeeCCcC----CcceeEECCCCC-EEEEc-------
Confidence 356678999997 544131 2356899998776654443222111 145788999998 55440
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCC-ceeEcCCC--ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIGPP--AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l~~~--~~~~~~~~SpDGk~l 346 (954)
....|++++.+| ....+... .....++++|||+ |
T Consensus 85 ------------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 121 (270)
T 1rwi_B 85 ------------------------------------------FNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-V 121 (270)
T ss_dssp ------------------------------------------TTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-E
T ss_pred ------------------------------------------CCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-E
Confidence 112477788733 44433322 4566788999997 4
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
+++... ...|++++..+......... ....+..+++++||+ +|+.+.
T Consensus 122 ~v~~~~------------~~~i~~~~~~~~~~~~~~~~------------~~~~p~~i~~~~~g~--l~v~~~------- 168 (270)
T 1rwi_B 122 YVADRG------------NNRVVKLAAGSKTQTVLPFT------------GLNDPDGVAVDNSGN--VYVTDT------- 168 (270)
T ss_dssp EEEEGG------------GTEEEEECTTCCSCEECCCC------------SCCSCCCEEECTTCC--EEEEEG-------
T ss_pred EEEECC------------CCEEEEEECCCceeEeeccc------------cCCCceeEEEeCCCC--EEEEEC-------
Confidence 443322 12677776543322211110 012345789999997 344221
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEeecc-cccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
..+.|++++. ++.......... .....+++++|| .|+++...+ ..|++++.++.
T Consensus 169 ----~~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~---~~v~~~~~~~~ 223 (270)
T 1rwi_B 169 ----DNNRVVKLEA---ESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNT---NQVVKLLAGST 223 (270)
T ss_dssp ----GGTEEEEECT---TTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTT---SCEEEECTTCS
T ss_pred ----CCCEEEEEec---CCCceEeecccCCCCceEEEECCCC-CEEEEECCC---CcEEEEcCCCC
Confidence 2357888885 444433322222 345678999999 555554333 35888888764
No 441
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.44 E-value=4.6e-07 Score=92.75 Aligned_cols=156 Identities=11% Similarity=0.069 Sum_probs=84.0
Q ss_pred cEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC---CcccEEEE
Q 002194 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIA 789 (954)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~ 789 (954)
|.|+..+ ..|+|.. ..|+.+.++.+. ...++.++|||+||.++..++.+.+ +.++++|.
T Consensus 43 ~~v~~~d---~~g~~~~----------~~~~~~~i~~~~-----~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl 104 (230)
T 1jmk_C 43 YKLCAFD---FIEEEDR----------LDRYADLIQKLQ-----PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIM 104 (230)
T ss_dssp EEEEEEC---CCCSTTH----------HHHHHHHHHHHC-----CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEec---CCCHHHH----------HHHHHHHHHHhC-----CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEE
Confidence 9999844 4455432 234444444431 1247999999999999999987653 56888888
Q ss_pred eccCCCCCCCCCC---Ccc----------ccchhh-----hcH----HHHHhcCc-ccccCCCCCCEEEEEeCCCCCCCC
Q 002194 790 RSGAYNRTLTPFG---FQN----------EDRTLW-----EAT----STYVEMSP-FMSANKLKKPILLVHGEEDNNSGT 846 (954)
Q Consensus 790 ~~~~~~~~~~~~~---~~~----------~~~~~~-----~~~----~~~~~~sp-~~~~~~~~~P~Lii~G~~D~~v~~ 846 (954)
+++........+. ... ...... ... ..+..+.. .....++++|+++++|++|..++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~- 183 (230)
T 1jmk_C 105 VDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP- 183 (230)
T ss_dssp ESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC-
T ss_pred ECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc-
Confidence 7754221100000 000 000000 000 01111110 12346788999999999999875
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEeCCCCC--cCCCcccHHHHHHHHHHHH
Q 002194 847 LTMQSDRFFNALKGHGALCRLVILPFESH--GYAARESIMHVLWETDRWL 894 (954)
Q Consensus 847 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H--~~~~~~~~~~~~~~i~~fl 894 (954)
.. ...+.+ ....+++++.+++ +| .+ ..+....+...+.+||
T Consensus 184 -~~-~~~w~~---~~~~~~~~~~i~g-~H~~~~-~~~~~~~~~~~i~~~l 226 (230)
T 1jmk_C 184 -EW-LASWEE---ATTGAYRMKRGFG-THAEML-QGETLDRNAGILLEFL 226 (230)
T ss_dssp -TT-EECSGG---GBSSCEEEEECSS-CGGGTT-SHHHHHHHHHHHHHHH
T ss_pred -cc-cchHHH---hcCCCeEEEEecC-ChHHHc-CcHhHHHHHHHHHHHH
Confidence 22 212211 1233588999998 89 55 3344444555555554
No 442
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.42 E-value=3.4e-07 Score=101.80 Aligned_cols=166 Identities=13% Similarity=0.136 Sum_probs=104.2
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCc---EEEEcCCCCCCCCCCcc---------------c
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF---AILGGPTTPIIGEGDEE---------------A 731 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~---~V~~~~~~~~~G~G~~~---------------~ 731 (954)
.|.||++||..... ..| ..++..|+++|| .|+. .+..|+|.+. .
T Consensus 22 ~ppVVLlHG~g~s~-----------~~w----~~la~~La~~Gy~~~~Via---~DlpG~G~S~~~~~Dv~~~G~~~~~G 83 (484)
T 2zyr_A 22 FRPVVFVHGLAGSA-----------GQF----ESQGMRFAANGYPAEYVKT---FEYDTISWALVVETDMLFSGLGSEFG 83 (484)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHTTCCGGGEEE---ECCCHHHHHHHTTTSTTTTTGGGHHH
T ss_pred CCEEEEECCCCCCH-----------HHH----HHHHHHHHHcCCCcceEEE---EECCCCCccccccccccccccccccc
Confidence 57789999963211 111 245677888999 6888 4555666430 0
Q ss_pred -------------------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC---CcccEEEE
Q 002194 732 -------------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIA 789 (954)
Q Consensus 732 -------------------~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~ 789 (954)
........++++.+.++.+.++. +.+++.++||||||.+++.++.++| ++++++|+
T Consensus 84 ~n~~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVl 161 (484)
T 2zyr_A 84 LNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLIL 161 (484)
T ss_dssp HHHGGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEE
T ss_pred cccccccccccccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEE
Confidence 00123345677777787777763 2368999999999999999999987 48999999
Q ss_pred eccCCCCCCCCCCCccccchhhhcHHHHHhcCcccccCCCCCCEEEEEeCCCCC--CCCchHHHHHHHHHHHhCCCcEEE
Q 002194 790 RSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNN--SGTLTMQSDRFFNALKGHGALCRL 867 (954)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~--v~~~~~~~~~~~~~l~~~g~~~~~ 867 (954)
+++.++.. + ....++|-+.|..|.. |.. +.. .++. ..+.
T Consensus 162 Iapp~~~d----------------------~-------p~g~~~L~ilG~~d~~p~V~~-pss------~L~~---ga~~ 202 (484)
T 2zyr_A 162 LDGVWGVD----------------------A-------PEGIPTLAVFGNPKALPALGL-PEE------KVVY---NATN 202 (484)
T ss_dssp ESCCCSEE----------------------C-------CTTSCEEEEEECGGGSCCSSC-CSS------CCEE---TSEE
T ss_pred ECCccccc----------------------c-------CcCCHHHHHhCCCCcCCcccC-hhH------hcCC---CceE
Confidence 99865310 0 1235677777766531 110 111 1110 1256
Q ss_pred EEeCCCCCcCCCcccHHHHHHHHHHHHHH
Q 002194 868 VILPFESHGYAARESIMHVLWETDRWLQK 896 (954)
Q Consensus 868 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (954)
+++++++|... ..+ ..+.+.+.+||..
T Consensus 203 v~i~~a~H~~l-l~d-p~v~~~Vl~fL~~ 229 (484)
T 2zyr_A 203 VYFNNMTHVQL-CTS-PETFAVMFEFING 229 (484)
T ss_dssp EEETTCCHHHH-HHC-HHHHHHHHHHHHS
T ss_pred EEECCCCcccc-ccC-HHHHHHHHHHhcc
Confidence 67799999853 222 3456678888875
No 443
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.41 E-value=2.9e-05 Score=86.00 Aligned_cols=180 Identities=12% Similarity=0.096 Sum_probs=117.2
Q ss_pred ceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh
Q 002194 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (954)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (954)
...|+.+++++++...+...... ...++|.+++..|+++-.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~-----~~gl~~d~~~~~ly~~D~---------------------------------- 135 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSDV---------------------------------- 135 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSC-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred CccceeeccCCCcEEEEecCCCc-----cEEEEEecCCCeEEEEeC----------------------------------
Confidence 45799999988776665543322 457899988778887610
Q ss_pred hccCccccccccccccceEEEEEeCC-ceeEc-CCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc
Q 002194 298 LLKDEYDEDLFDYYATTQLVLVSLDG-TVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (954)
Q Consensus 298 ~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l-~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~ 374 (954)
....|++++++| ..+.+ ... ....++++.+.+..|+++.... ..|++++++
T Consensus 136 --------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~------------~~I~~~~~d 189 (386)
T 3v65_B 136 --------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT------------SRIEVANLD 189 (386)
T ss_dssp --------------TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTT------------TEEEECBTT
T ss_pred --------------CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCC------------CeEEEEeCC
Confidence 234688999844 44443 333 4556788888888888776332 278888888
Q ss_pred CceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec
Q 002194 375 GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL 454 (954)
Q Consensus 375 g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~ 454 (954)
|+..+.+..... ..++.+++.|++..| ||++.. ....|+++++ +|...+.+...
T Consensus 190 g~~~~~l~~~~l------------~~P~giavdp~~g~l-y~td~~----------~~~~I~r~~~---dG~~~~~~~~~ 243 (386)
T 3v65_B 190 GAHRKVLLWQSL------------EKPRAIALHPMEGTI-YWTDWG----------NTPRIEASSM---DGSGRRIIADT 243 (386)
T ss_dssp SCSCEEEECSSC------------SCEEEEEEETTTTEE-EEEECS----------SSCEEEEEET---TSCSCEEEECS
T ss_pred CCceEEeecCCC------------CCCcEEEEEcCCCeE-EEeccC----------CCCEEEEEeC---CCCCcEEEEEC
Confidence 765544433111 234578899877654 553321 1357999986 66665555433
Q ss_pred -ccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 455 -DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 455 -~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
-....+++|+|+++.|+++.... .+|++++.++.
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD~~~---~~I~~~d~dG~ 278 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGS 278 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEETTT---TEEEEECTTSC
T ss_pred CCCCeeeEEEeCCCCEEEEEECCC---CEEEEEeCCCC
Confidence 23356799999999998885433 57999999874
No 444
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.40 E-value=5.2e-07 Score=101.57 Aligned_cols=108 Identities=11% Similarity=-0.123 Sum_probs=77.9
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~a 746 (954)
.|+||++||++... ...+.......|++ .||.|++ .|..|+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~~~-------------~~~w~~~l~~~l~~~~~~~Vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~l 133 (452)
T 1bu8_A 70 RKTRFIVHGFIDKG-------------EDGWLLDMCKKMFQVEKVNCIC---VDWRRGSRTEYTQASYNTRVVGAEIAFL 133 (452)
T ss_dssp SEEEEEECCSCCTT-------------CTTHHHHHHHHHHTTCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCC-------------CchHHHHHHHHHHhhCCCEEEE---EechhcccCchhHhHhhHHHHHHHHHHH
Confidence 58999999964211 01111113445555 4999999 566677776432 11223556788889
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
+++|.++..++.+++.|+|||+||.+|+.++.++|++++++|.++|.
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1bu8_A 134 VQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA 180 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCC
Confidence 99987654466789999999999999999999999999999999875
No 445
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.40 E-value=1.9e-05 Score=89.69 Aligned_cols=209 Identities=12% Similarity=0.058 Sum_probs=113.6
Q ss_pred cccceeecC-----CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeE-e-cCCeEEEEEe
Q 002194 190 KLNFVTWSQ-----DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW-V-NNSTLLVCTI 262 (954)
Q Consensus 190 ~~~~~~wSP-----DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w-s-pDG~~l~~~~ 262 (954)
...+|..|. ||++|+. .+ ..+..|.++|+++.+..+++..+... ....+++ + ||++++++..
T Consensus 86 d~hh~~~s~t~g~~DG~~lfV-nd-------~~~~rVavIdl~t~~~~~ii~ip~g~---~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 86 DLHHVHMSFTEGKYDGRFLFM-ND-------KANTRVARVRCDVMKCDAILEIPNAK---GIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp CBCCEEEEEETTEEEEEEEEE-EE-------TTTTEEEEEETTTTEEEEEEECSSCC---SEEEEEECCSSBCSEEEEEE
T ss_pred CCCccccCCCCCCcCCCEEEE-Ec-------CCCCEEEEEECCCceEeeEEeCCCCC---CCcceeeeecCCCcEEEEec
Confidence 456688887 9987665 42 24778999999999877765544321 1446666 5 9999998772
Q ss_pred cCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCCccccccccC
Q 002194 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPPAVYTSLDPS 340 (954)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~~~~~~~~~S 340 (954)
...... ++++.. ..+ .++ ....+-.+|. +.+ ..++.-++.....+.|
T Consensus 155 ~~~~p~--------------~~dg~~------l~~--~~~---------~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~s 203 (595)
T 1fwx_A 155 EDETPL--------------VNDGTN------MED--VAN---------YVNVFTAVDADKWEVAWQVLVSGNLDNCDAD 203 (595)
T ss_dssp CSCEES--------------SCSSSS------TTC--GGG---------EEEEEEEEETTTTEEEEEEEESSCCCCEEEC
T ss_pred cccccc--------------CCCCcc------ccc--ccc---------cCceEEEEECCCCeEEEEEEeCCCccceEEC
Confidence 110000 001000 000 001 2344667787 553 3344333456678899
Q ss_pred CCCcEEEEEeecCCcccccc--cCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002194 341 PDEKYILISSIHRPYSFIVP--CGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (954)
Q Consensus 341 pDGk~l~~~s~~~~~~~~~~--~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~ 418 (954)
|||++++.++...+...... ...-...+.+.+.. +...+.+||+....
T Consensus 204 pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~---------------------------~~~~~v~~Gk~~~i--- 253 (595)
T 1fwx_A 204 YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA---------------------------EIEKAIAAGDYQEL--- 253 (595)
T ss_dssp SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH---------------------------HHHHHHHHTCSEEE---
T ss_pred CCCCEEEEEecCcccCcchhhccccccceEEEeecc---------------------------ceeEeccCCCeeEE---
Confidence 99999999885532110000 00000012122111 12236677775321
Q ss_pred eccCCCccccccCCCeEEEEecCCCC--CCC-ceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 419 TQDGGDAKVEVTPRDIIYTQQAEPVQ--GEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~--g~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
+.+.++|. .+ +.. .+.+.. .....++.+||||++++.+.... ..+.++|.++
T Consensus 254 --------------~~V~VID~--~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s---~~VsVid~~~ 308 (595)
T 1fwx_A 254 --------------NGVKVVDG--RKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLS---PTVTVLDVTR 308 (595)
T ss_dssp --------------TTEEEEEC--SGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTS---SBEEEEEGGG
T ss_pred --------------CcEEEEeC--cccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCC---CeEEEEECcc
Confidence 23778885 22 223 233333 33567899999999988764433 3577777764
No 446
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.39 E-value=4.3e-05 Score=82.76 Aligned_cols=234 Identities=6% Similarity=-0.019 Sum_probs=121.8
Q ss_pred ceEEEEEe-CCceeEcCC-C--ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCc--eEEEeccCCCc
Q 002194 314 TQLVLVSL-DGTVKEIGP-P--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FVRELCDLPLA 387 (954)
Q Consensus 314 ~~l~~~~~-~G~~~~l~~-~--~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~--~~~~l~~~~~~ 387 (954)
..|+++|. +|+...... . .....++++|||+ |+++... ...|++|+.+++ ....+......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~------------~~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVA------------LHQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETT------------TTEEEEECTTCSSCCSEEESBTTBC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECC------------CCEEEEEeCCCCeEEEEEecccCCC
Confidence 46889998 787554332 2 4556789999999 4444322 237889998876 34444321100
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecc----------cc
Q 002194 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD----------LR 457 (954)
Q Consensus 388 ~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~----------~~ 457 (954)
... ......+..++++|++..+++. +. .....|++++. +|.....+.... ..
T Consensus 136 g~~----~~~~~~P~~ia~~~~~g~lyv~-d~----------~~~~~I~~~~~---~g~~~~~~~~~g~~~~~~~~~~~~ 197 (329)
T 3fvz_A 136 GSD----QNHFCQPTDVAVEPSTGAVFVS-DG----------YCNSRIVQFSP---SGKFVTQWGEESSGSSPRPGQFSV 197 (329)
T ss_dssp CCS----TTCCSSEEEEEECTTTCCEEEE-EC----------SSCCEEEEECT---TSCEEEEECEECCSSSCCTTEESC
T ss_pred CCC----ccccCCCcEEEEeCCCCeEEEE-eC----------CCCCeEEEEcC---CCCEEEEeccCCCCCCCCCcccCC
Confidence 000 0111245679999944444443 21 02457888874 544444442111 12
Q ss_pred cCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecC--CCCCccCCCCCCCeeeccCCcEEEEEEeeccCCC
Q 002194 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEG 535 (954)
Q Consensus 458 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~ 535 (954)
..+++++||+..|+++...+ .+|.+++.+++ +....... .....+. +.++| |. ++...+
T Consensus 198 p~gia~d~~~g~l~v~d~~~---~~I~~~~~~~G--~~~~~~~~~~~~~~~~~------~~~~p-g~--~~~~~g----- 258 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADREN---GRIQCFKTDTK--EFVREIKHASFGRNVFA------ISYIP-GF--LFAVNG----- 258 (329)
T ss_dssp EEEEEEETTTTEEEEEETTT---TEEEEEETTTC--CEEEEECCTTTTTCEEE------EEEET-TE--EEEEEC-----
T ss_pred CcEEEEECCCCEEEEEECCC---CEEEEEECCCC--cEEEEEeccccCCCcce------eeecC-CE--EEEeCC-----
Confidence 45689999966676664433 46888888754 22222211 1111122 56777 42 222211
Q ss_pred cEEEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEE
Q 002194 536 TYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQS 615 (954)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~ 615 (954)
.+|+. ......+++||+.+|+.......... -+..+. ..++++|| .++++... ...|++++
T Consensus 259 -~~~v~------~~~~~~v~~~~~~~g~~~~~~~~~~~-~~~~p~-------~ia~~~dG-~lyvad~~---~~~I~~~~ 319 (329)
T 3fvz_A 259 -KPYFG------DQEPVQGFVMNFSSGEIIDVFKPVRK-HFDMPH-------DIVASEDG-TVYIGDAH---TNTVWKFT 319 (329)
T ss_dssp -CCCTT------CSCCCCEEEEETTTCCEEEEECCSSS-CCSSEE-------EEEECTTS-EEEEEESS---SCCEEEEE
T ss_pred -CEEec------cCCCcEEEEEEcCCCeEEEEEcCCCC-ccCCee-------EEEECCCC-CEEEEECC---CCEEEEEe
Confidence 11111 11234699999998887766542211 011112 24688888 55544433 23577766
Q ss_pred C
Q 002194 616 W 616 (954)
Q Consensus 616 ~ 616 (954)
+
T Consensus 320 ~ 320 (329)
T 3fvz_A 320 L 320 (329)
T ss_dssp E
T ss_pred C
Confidence 4
No 447
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.38 E-value=3e-05 Score=81.89 Aligned_cols=201 Identities=8% Similarity=0.043 Sum_probs=111.1
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCC-ccccccccceeEe-cCCeEEEEEecCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWV-NNSTLLVCTIPLLRG 267 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~ws-pDG~~l~~~~~~~~~ 267 (954)
....++++|||+ |+++.. ....|++++.++...+.+..... .........++++ ++|++++...
T Consensus 31 ~p~~v~~~~~g~-l~v~~~--------~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~----- 96 (286)
T 1q7f_A 31 EPSGVAVNAQND-IIVADT--------NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER----- 96 (286)
T ss_dssp CEEEEEECTTCC-EEEEEG--------GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC-----
T ss_pred CCceEEECCCCC-EEEEEC--------CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC-----
Confidence 456678999997 444321 25679999988654444422110 0000113467774 6676444320
Q ss_pred CCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCc-eeEcCCC--ccccccccCCCCc
Q 002194 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGPP--AVYTSLDPSPDEK 344 (954)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~-~~~l~~~--~~~~~~~~SpDGk 344 (954)
. ....|++++.+|+ .+.+... .....++++|||+
T Consensus 97 ----------------------------------~---------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~ 133 (286)
T 1q7f_A 97 ----------------------------------S---------PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR 133 (286)
T ss_dssp ----------------------------------G---------GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC
T ss_pred ----------------------------------C---------CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC
Confidence 0 1234777777554 3333322 4566788999997
Q ss_pred EEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002194 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (954)
Q Consensus 345 ~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~ 424 (954)
|+++... ...|++|+.++...+.+.... ....+..++++|||+ +|..+.
T Consensus 134 -l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~-----------~~~~p~~i~~~~~g~--l~v~~~----- 182 (286)
T 1q7f_A 134 -IIVVECK------------VMRVIIFDQNGNVLHKFGCSK-----------HLEFPNGVVVNDKQE--IFISDN----- 182 (286)
T ss_dssp -EEEEETT------------TTEEEEECTTSCEEEEEECTT-----------TCSSEEEEEECSSSE--EEEEEG-----
T ss_pred -EEEEECC------------CCEEEEEcCCCCEEEEeCCCC-----------ccCCcEEEEECCCCC--EEEEEC-----
Confidence 4443311 237889998876655543211 012346789999997 333221
Q ss_pred ccccccCCCeEEEEecCCCCCCCceEEeec--ccccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
..+.|++++. ++.....+... ......+++++||+ |+++...++ ..|.+++.++
T Consensus 183 ------~~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~--~~i~~~~~~g 238 (286)
T 1q7f_A 183 ------RAHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNN--FNLTIFTQDG 238 (286)
T ss_dssp ------GGTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSS--CEEEEECTTS
T ss_pred ------CCCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCC--EEEEEECCCC
Confidence 2457888884 54433444222 13456789999996 444433221 2688888765
No 448
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.38 E-value=1.6e-06 Score=91.47 Aligned_cols=119 Identities=13% Similarity=-0.048 Sum_probs=77.4
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcc
Q 002194 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE 730 (954)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~ 730 (954)
.+...++.|.. .+.. ..+.||++||..... ...|...+...|.++||.|+.. +..|+|.+.
T Consensus 49 ~L~~~i~~p~~-~~~~--~~~pVVLvHG~~~~~-------------~~~w~~~l~~~L~~~Gy~V~a~---DlpG~G~~~ 109 (316)
T 3icv_A 49 VLDAGLTCQGA-SPSS--VSKPILLVPGTGTTG-------------PQSFDSNWIPLSAQLGYTPCWI---SPPPFMLND 109 (316)
T ss_dssp HHHHTEEETTB-BTTB--CSSEEEEECCTTCCH-------------HHHHTTTHHHHHHHTTCEEEEE---CCTTTTCSC
T ss_pred hHhhhEeCCCC-CCCC--CCCeEEEECCCCCCc-------------HHHHHHHHHHHHHHCCCeEEEe---cCCCCCCCc
Confidence 34455666743 2222 245688899952110 0001113566788899999994 445666542
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC---CCcccEEEEeccCCC
Q 002194 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFCCGIARSGAYN 795 (954)
Q Consensus 731 ~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~~~~~ 795 (954)
.....+++.+.++.+.+... .+++.|+||||||.++.+++... +++++.+|++++...
T Consensus 110 -----~~~~~~~la~~I~~l~~~~g--~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 110 -----TQVNTEYMVNAITTLYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred -----HHHHHHHHHHHHHHHHHHhC--CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 23345667777777776532 36899999999999998877764 589999999998765
No 449
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.38 E-value=8.1e-05 Score=82.40 Aligned_cols=188 Identities=11% Similarity=0.073 Sum_probs=121.3
Q ss_pred cceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccC
Q 002194 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDI 390 (954)
Q Consensus 313 ~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~ 390 (954)
...|+++++ ++....+... .....++|++++..|+++... ...|+.++.+++..+.+.....
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~---- 158 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL---- 158 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCCEEEEECSSC----
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCC------------CCcEEEEecCCCCcEEEEeCCC----
Confidence 345888888 4455555544 667789999988888887633 2378899999876655543211
Q ss_pred CccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecc-cccCceeeccCCce
Q 002194 391 PIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLA 469 (954)
Q Consensus 391 p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~ 469 (954)
..+..+++.+.+..| ||++. ..+.|+++++ +|...+.+.... ....++++.|++..
T Consensus 159 --------~~p~glavd~~~g~l-Y~~d~-----------~~~~I~~~~~---dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 159 --------ESPGGLAVDWVHDKL-YWTDS-----------GTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp --------SCCCCEEEETTTTEE-EEEET-----------TTTEEEECBT---TSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred --------CCccEEEEEeCCCeE-EEEcC-----------CCCeEEEEeC---CCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 123467888766654 44332 2457888885 665555554332 34567899999999
Q ss_pred EEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCC
Q 002194 470 LVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEG 549 (954)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (954)
|+++.+.. ..+|+++++++. ..+.+.........+ ++++|++..|++...
T Consensus 216 ly~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~~PnG------lavd~~~~~lY~aD~-------------------- 265 (386)
T 3v65_B 216 IYWTDWGN--TPRIEASSMDGS--GRRIIADTHLFWPNG------LTIDYAGRRMYWVDA-------------------- 265 (386)
T ss_dssp EEEEECSS--SCEEEEEETTSC--SCEEEECSSCSCEEE------EEEEGGGTEEEEEET--------------------
T ss_pred EEEeccCC--CCEEEEEeCCCC--CcEEEEECCCCCeee------EEEeCCCCEEEEEEC--------------------
Confidence 98886544 257999999874 334443322222222 788988888888762
Q ss_pred CCCeEEEEECCCCCeEEEec
Q 002194 550 NIPFLDLFDINTGSKERIWE 569 (954)
Q Consensus 550 ~~~~l~~~d~~~g~~~~l~~ 569 (954)
....|+++|++++..+.+..
T Consensus 266 ~~~~I~~~d~dG~~~~~~~~ 285 (386)
T 3v65_B 266 KHHVIERANLDGSHRKAVIS 285 (386)
T ss_dssp TTTEEEEECTTSCSCEEEEC
T ss_pred CCCEEEEEeCCCCeeEEEEE
Confidence 12369999998766655544
No 450
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.37 E-value=7.3e-07 Score=100.41 Aligned_cols=108 Identities=11% Similarity=-0.039 Sum_probs=77.1
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHC-CcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (954)
.|+||++||.... ....+.......|+++ ||.|++ .|..|+|.+.... .......+|+.+.
T Consensus 70 ~p~vvliHG~~~~-------------~~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~G~S~~~~~~~~~~~~~~dl~~~ 133 (452)
T 1w52_X 70 RKTHFVIHGFRDR-------------GEDSWPSDMCKKILQVETTNCIS---VDWSSGAKAEYTQAVQNIRIVGAETAYL 133 (452)
T ss_dssp SCEEEEECCTTCC-------------SSSSHHHHHHHHHHTTSCCEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCC-------------CCchHHHHHHHHHHhhCCCEEEE---EecccccccccHHHHHhHHHHHHHHHHH
Confidence 5889999996321 1011112234556654 999999 5666777664321 1223456788888
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
+++|.++..++.+++.|+|||+||.+|+.++.+.|++++++|.++|.
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1w52_X 134 IQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPA 180 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccc
Confidence 88887654456789999999999999999999999999999999875
No 451
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.36 E-value=6.1e-05 Score=82.16 Aligned_cols=180 Identities=11% Similarity=0.083 Sum_probs=117.0
Q ss_pred ceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh
Q 002194 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (954)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (954)
...|+.+++++.+...+...... ...++|.+++..|+++- .
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~-----~~~l~~d~~~~~ly~~D---------------------~------------- 92 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSD---------------------V------------- 92 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSC-----EEEEEEETTTTEEEEEE---------------------T-------------
T ss_pred ccceEEEeCCCCeeEEeecCCCc-----eEEEEEeccccEEEEEe---------------------c-------------
Confidence 45689999988776655433322 45789998888888761 0
Q ss_pred hccCccccccccccccceEEEEEeC-CceeEcC-CC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc
Q 002194 298 LLKDEYDEDLFDYYATTQLVLVSLD-GTVKEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (954)
Q Consensus 298 ~l~~~~d~~~~~~~~~~~l~~~~~~-G~~~~l~-~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~ 374 (954)
....|++++++ +..+.+. .. ....++++.++++.|+++.... ..|++.+++
T Consensus 93 --------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~------------~~I~~~~~d 146 (349)
T 3v64_C 93 --------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT------------SRIEVANLD 146 (349)
T ss_dssp --------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT------------TEEEEEETT
T ss_pred --------------cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCC------------CeEEEEcCC
Confidence 23458899984 4444433 23 4556778888888888876332 378899998
Q ss_pred CceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec
Q 002194 375 GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL 454 (954)
Q Consensus 375 g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~ 454 (954)
|+..+.+..... ..++.+++.|++.. +||++.. ....|+++++ +|...+.+...
T Consensus 147 G~~~~~l~~~~l------------~~P~~iavdp~~g~-ly~td~~----------~~~~I~r~~~---dG~~~~~~~~~ 200 (349)
T 3v64_C 147 GAHRKVLLWQSL------------EKPRAIALHPMEGT-IYWTDWG----------NTPRIEASSM---DGSGRRIIADT 200 (349)
T ss_dssp SCSCEEEECTTC------------SCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCSCEESCCS
T ss_pred CCceEEEEeCCC------------CCcceEEEecCcCe-EEEeccC----------CCCEEEEEeC---CCCCcEEEEEC
Confidence 876554433111 23457889987764 4553321 1257999986 66655555332
Q ss_pred -ccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 455 -DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 455 -~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
-....+++|+|+++.|+++.... .+|++++.++.
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~---~~I~~~~~dG~ 235 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGS 235 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred CCCCcceEEEeCCCCEEEEEECCC---CEEEEEeCCCC
Confidence 33356799999999998885433 57999999874
No 452
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.32 E-value=0.0002 Score=76.80 Aligned_cols=225 Identities=11% Similarity=0.070 Sum_probs=131.7
Q ss_pred cceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC----ceEEEeccCCC
Q 002194 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPL 386 (954)
Q Consensus 313 ~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g----~~~~~l~~~~~ 386 (954)
...|.++++ +++...+... .....++|+++++.|+++... ...|+.+++++ +..+.+....
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~------------~~~I~~~~~~g~~~~~~~~~~~~~~- 75 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD- 75 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSS-
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC------------CCcEEEEECCCCCCCcccEEEEeCC-
Confidence 345889998 5554444444 666789999998888887633 23788888886 3323322110
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEee-cccccCceeecc
Q 002194 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCD 465 (954)
Q Consensus 387 ~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-~~~~~~~~~~sp 465 (954)
...+..+++.+.+..| ||++. ..+.|.+++. +|...+.+.. ......+++..|
T Consensus 76 -----------~~~p~glavd~~~~~l-y~~d~-----------~~~~I~~~~~---~g~~~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 76 -----------IQAPDGLAVDWIHSNI-YWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp -----------CSCCCEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEEET
T ss_pred -----------CCCcCEEEEeecCCeE-EEEEC-----------CCCEEEEEeC---CCCceEEEEECCCCCcceEEeCC
Confidence 0233567887766654 55332 2457888885 6655555543 334556789999
Q ss_pred CCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCC
Q 002194 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (954)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (954)
+++.|+++.+.. ..+|+++++++. ..+.+.........+ ++++++++.|++...
T Consensus 130 ~~g~ly~~d~~~--~~~I~~~~~dG~--~~~~~~~~~~~~P~g------la~d~~~~~lY~~D~---------------- 183 (316)
T 1ijq_A 130 VHGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS---------------- 183 (316)
T ss_dssp TTTEEEEEECSS--SCEEEEEETTSC--CEEEEECSSCSCEEE------EEEETTTTEEEEEET----------------
T ss_pred CCCEEEEEccCC--CCeEEEEcCCCC--CeEEEEECCCCCceE------EEEeccCCEEEEEEC----------------
Confidence 988888876543 257999999874 333343322222122 788999888888762
Q ss_pred CCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCc
Q 002194 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (954)
Q Consensus 546 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~ 620 (954)
....|+++|++++..+.+...... ..... .+..+++.++++.. ....+++++..+|+
T Consensus 184 ----~~~~I~~~d~dg~~~~~~~~~~~~--~~~P~---------giav~~~~ly~~d~---~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 184 ----KLHSISSIDVNGGNRKTILEDEKR--LAHPF---------SLAVFEDKVFWTDI---INEAIFSANRLTGS 240 (316)
T ss_dssp ----TTTEEEEEETTSCSCEEEEECTTT--TSSEE---------EEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred ----CCCeEEEEecCCCceEEEeecCCc--cCCcE---------EEEEECCEEEEEEC---CCCeEEEEeCCCCc
Confidence 123699999987666655443211 00111 12234556665443 23567777765554
No 453
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.31 E-value=0.0001 Score=79.18 Aligned_cols=180 Identities=14% Similarity=-0.011 Sum_probs=113.6
Q ss_pred ceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh
Q 002194 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (954)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (954)
...|.++++++++...+...... ...++|.++++.|+++-.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~-----p~g~~~d~~~~~ly~~D~---------------------------------- 49 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 49 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSS-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred CCeEEEEECCCcceEehhcCCCc-----eEEEEEEeCCCEEEEEEC----------------------------------
Confidence 45789999998776555432221 458899998888887710
Q ss_pred hccCccccccccccccceEEEEEeCC-----ceeEc-CCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEE
Q 002194 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (954)
Q Consensus 298 ~l~~~~d~~~~~~~~~~~l~~~~~~G-----~~~~l-~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l 370 (954)
....|++++++| ....+ ... ....++++.++++.|+++... ...|.+
T Consensus 50 --------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~------------~~~I~~ 103 (316)
T 1ijq_A 50 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 103 (316)
T ss_dssp --------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC------------CCEEEE
Confidence 234588888843 22332 222 445677888878888776532 237888
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE
Q 002194 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (954)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (954)
++++|+..+.+..... ..++.++..|++.. +||++.. ....|+++++ +|...+.
T Consensus 104 ~~~~g~~~~~~~~~~~------------~~P~~iavdp~~g~-ly~~d~~----------~~~~I~~~~~---dG~~~~~ 157 (316)
T 1ijq_A 104 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGL---NGVDIYS 157 (316)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCCEEE
T ss_pred EeCCCCceEEEEECCC------------CCcceEEeCCCCCE-EEEEccC----------CCCeEEEEcC---CCCCeEE
Confidence 9998876555543111 23457889887764 4553321 1357899885 6655555
Q ss_pred Eeec-ccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 451 LHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 451 l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+... -....+++|+++++.|+++.... .+|++++.++.
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D~~~---~~I~~~d~dg~ 196 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 196 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EEECCCCCceEEEEeccCCEEEEEECCC---CeEEEEecCCC
Confidence 5332 23456799999999998875433 57999999874
No 454
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.28 E-value=2.9e-06 Score=89.77 Aligned_cols=103 Identities=16% Similarity=0.006 Sum_probs=69.2
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (954)
.|.||++||...... . .....| ......|.++||.|+. .+..|+|.+. .......+|+.++++.
T Consensus 7 ~~~vvlvHG~~~~~~-----~-~~~~~~----~~~~~~L~~~G~~v~~---~d~~g~g~s~---~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 7 KYPIVLAHGMLGFDN-----I-LGVDYW----FGIPSALRRDGAQVYV---TEVSQLDTSE---VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp SSCEEEECCTTCCSE-----E-TTEESS----TTHHHHHHHTTCCEEE---ECCCSSSCHH---HHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCCcc-----c-cccccH----HHHHHHHHhCCCEEEE---EeCCCCCCch---hhHHHHHHHHHHHHHH
Confidence 477889999632110 0 000112 1356678899999999 4555676653 1223444444444443
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccCC
Q 002194 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (954)
Q Consensus 750 l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (954)
+ +.+++.++||||||.++..++.++|++++++|.+++..
T Consensus 71 ~------~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 S------GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp H------CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h------CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 3 34689999999999999999999999999999999853
No 455
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.28 E-value=0.0002 Score=77.99 Aligned_cols=188 Identities=11% Similarity=0.063 Sum_probs=119.7
Q ss_pred cceEEEEEeCC-ceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccC
Q 002194 313 TTQLVLVSLDG-TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDI 390 (954)
Q Consensus 313 ~~~l~~~~~~G-~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~ 390 (954)
...|++++++| ....+... .....++|++++..|+++... ...|+.++.+++..+.+.....
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~---- 115 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL---- 115 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC----
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEecc------------CCceEEEecCCCCceEEEeCCC----
Confidence 34588888844 44444444 566788999988888887633 2378889988876555433111
Q ss_pred CccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-ccccCceeeccCCce
Q 002194 391 PIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSLA 469 (954)
Q Consensus 391 p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~spDg~~ 469 (954)
..+..+++.+.+..| ||++. ..+.|+++++ +|...+.+... .....++++.|++..
T Consensus 116 --------~~p~glavd~~~g~l-y~~d~-----------~~~~I~~~~~---dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 116 --------ESPGGLAVDWVHDKL-YWTDS-----------GTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp --------SCCCEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred --------CCccEEEEecCCCeE-EEEcC-----------CCCeEEEEcC---CCCceEEEEeCCCCCcceEEEecCcCe
Confidence 123467888766654 44332 2457888885 66655555433 234567899999999
Q ss_pred EEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCC
Q 002194 470 LVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEG 549 (954)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (954)
|+++.+.. ..+|+++++++. ..+.+.........+ ++++|++..|++...
T Consensus 173 ly~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~~PnG------la~d~~~~~lY~aD~-------------------- 222 (349)
T 3v64_C 173 IYWTDWGN--TPRIEASSMDGS--GRRIIADTHLFWPNG------LTIDYAGRRMYWVDA-------------------- 222 (349)
T ss_dssp EEEEECSS--SCEEEEEETTSC--SCEESCCSSCSCEEE------EEEETTTTEEEEEET--------------------
T ss_pred EEEeccCC--CCEEEEEeCCCC--CcEEEEECCCCCcce------EEEeCCCCEEEEEEC--------------------
Confidence 98886554 257999999874 334433222221122 788998888888762
Q ss_pred CCCeEEEEECCCCCeEEEec
Q 002194 550 NIPFLDLFDINTGSKERIWE 569 (954)
Q Consensus 550 ~~~~l~~~d~~~g~~~~l~~ 569 (954)
....|+++|++++..+.+..
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~ 242 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVIS 242 (349)
T ss_dssp TTTEEEEEETTSCSCEEEEC
T ss_pred CCCEEEEEeCCCCceEEEEe
Confidence 12369999998766555543
No 456
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.27 E-value=0.00016 Score=80.44 Aligned_cols=180 Identities=14% Similarity=0.000 Sum_probs=115.9
Q ss_pred ceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh
Q 002194 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (954)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (954)
...|++++++++....+...... ...++|.+++..||++-.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~-----~~~l~~d~~~~~lywsD~---------------------------------- 131 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 131 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSC-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred cceeEEEccCCcceeEeccccCc-----ceEEeeeeccCceEEEec----------------------------------
Confidence 56899999998776666443322 457899998888887710
Q ss_pred hccCccccccccccccceEEEEEeCC-----ceeEc-CCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEE
Q 002194 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (954)
Q Consensus 298 ~l~~~~d~~~~~~~~~~~l~~~~~~G-----~~~~l-~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l 370 (954)
....|++++++| ....+ ... ....++++.+.++.|+++... ...|++
T Consensus 132 --------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~------------~~~I~~ 185 (400)
T 3p5b_L 132 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 185 (400)
T ss_dssp --------------TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC------------CCeEEE
Confidence 224577888743 22333 323 455667788777777777532 237888
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE
Q 002194 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (954)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (954)
.+++|+..+.+..... ..++.++..|.+.. +||++.. ....|+++++ +|...+.
T Consensus 186 ~~~~g~~~~~l~~~~~------------~~P~~iavdp~~g~-ly~td~~----------~~~~I~~~~~---dG~~~~~ 239 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGL---NGVDIYS 239 (400)
T ss_dssp ECTTTCSEEEEEECSS------------CCEEEEEEETTTTE-EEEEECS----------SSCCEEEEET---TSCSCEE
T ss_pred EeCCCCceEEEEeCCC------------CCcceEEEecccCe-EEEEeCC----------CCCEEEEEeC---CCCccEE
Confidence 9998876655543211 23457888887664 4553321 1347899986 6666666
Q ss_pred Eeecc-cccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 451 LHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 451 l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+.... ....+++++++++.|+++.... .+|+.++.++.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~---~~I~~~d~dG~ 278 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 278 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCC---CEEEEEeCCCC
Confidence 64332 3457799999999998874332 57999999875
No 457
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.27 E-value=0.00018 Score=75.44 Aligned_cols=182 Identities=13% Similarity=0.035 Sum_probs=106.9
Q ss_pred CCCceEEEEEECCCCceeecccCCC-ccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeec
Q 002194 215 SSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVR 293 (954)
Q Consensus 215 ~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 293 (954)
+.+...|+++|.++|+...-...+. .. ...+.++|||++|+ +
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~----~~~~~~~pdG~ilv-s-------------------------------- 53 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKGWE----CNSVAATKAGEILF-S-------------------------------- 53 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTTCC----CCEEEECTTSCEEE-E--------------------------------
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCccCC----CcCeEECCCCCEEE-e--------------------------------
Confidence 3457889999987777654433332 11 45788999999777 4
Q ss_pred hhhhhccCccccccccccccceEEEEEeCCc-eeEcCCC--ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEE
Q 002194 294 TFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGPP--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (954)
Q Consensus 294 ~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~-~~~l~~~--~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l 370 (954)
....++.+|.+|+ ..++..+ ..+.+..++|||+.|+..+.. ...++.
T Consensus 54 ------------------~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~------------~~~v~~ 103 (276)
T 3no2_A 54 ------------------YSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGH------------PSTILE 103 (276)
T ss_dssp ------------------CBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST------------TEEEEE
T ss_pred ------------------CCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCC------------CCEEEE
Confidence 1112445555442 2223222 345567899999998876631 126777
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE
Q 002194 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (954)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (954)
++.+|+....+...... + ......+.++..+||+.++.. ...+.|+.++. +|.....
T Consensus 104 vd~~Gk~l~~~~~~~~~---~----~~~~~~~~v~~~~~G~~lv~~-------------~~~~~v~~~d~---~G~~~w~ 160 (276)
T 3no2_A 104 VNMKGEVLSKTEFETGI---E----RPHAQFRQINKNKKGNYLVPL-------------FATSEVREIAP---NGQLLNS 160 (276)
T ss_dssp ECTTSCEEEEEEECCSC---S----SGGGSCSCCEECTTSCEEEEE-------------TTTTEEEEECT---TSCEEEE
T ss_pred EeCCCCEEEEEeccCCC---C----cccccccCceECCCCCEEEEe-------------cCCCEEEEECC---CCCEEEE
Confidence 78777766555432110 0 011123456788999855433 23557888885 5433333
Q ss_pred EeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 451 LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 451 l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+ ........+...++|..|+.... + .+|+.+|.++|
T Consensus 161 ~-~~~~~~~~~~~~~~g~~~v~~~~-~---~~v~~~d~~tG 196 (276)
T 3no2_A 161 V-KLSGTPFSSAFLDNGDCLVACGD-A---HCFVQLNLESN 196 (276)
T ss_dssp E-ECSSCCCEEEECTTSCEEEECBT-T---SEEEEECTTTC
T ss_pred E-ECCCCccceeEcCCCCEEEEeCC-C---CeEEEEeCcCC
Confidence 3 22334456777889987766432 2 46999999975
No 458
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.23 E-value=2.4e-06 Score=95.65 Aligned_cols=108 Identities=13% Similarity=-0.102 Sum_probs=74.1
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHH-HHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW-LARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (954)
.|+||++||.... ....+.......| +..+|.|++ .|..|+|.+.... .......+++.+.
T Consensus 69 ~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~---vD~~g~g~s~y~~~~~~~~~v~~~la~l 132 (449)
T 1hpl_A 69 RKTRFIIHGFIDK-------------GEESWLSTMCQNMFKVESVNCIC---VDWKSGSRTAYSQASQNVRIVGAEVAYL 132 (449)
T ss_dssp SEEEEEECCCCCT-------------TCTTHHHHHHHHHHHHCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCC-------------CCccHHHHHHHHHHhcCCeEEEE---EeCCcccCCccHHHHHHHHHHHHHHHHH
Confidence 5899999995311 0011111123344 457999999 5556666653221 1123345677788
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
+++|.++..++.+++.|+||||||.+|+.++.+.|++++.++.+.|.
T Consensus 133 l~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 133 VGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 88886543456789999999999999999999999999999988875
No 459
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.23 E-value=0.00018 Score=76.10 Aligned_cols=192 Identities=13% Similarity=0.088 Sum_probs=105.5
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..+.++|||+ |+++.. +...|++++.+ ++.+.+...... ..+..+.+.+||++.+.. .
T Consensus 58 ~~~~i~~~~~g~-l~v~~~--------~~~~i~~~~~~-g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 117 (299)
T 2z2n_A 58 KVMCLTISSDGE-VWFTEN--------AANKIGRITKK-GIIKEYTLPNPD---SAPYGITEGPNGDIWFTE-M------ 117 (299)
T ss_dssp CEEEEEECTTSC-EEEEET--------TTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECTTSCEEEEE-T------
T ss_pred ceeeEEECCCCC-EEEeCC--------CCCeEEEECCC-CcEEEEeCCCcC---CCceeeEECCCCCEEEEe-c------
Confidence 566788999997 444321 24578999987 444433211111 014577788888754432 0
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCC--C-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~--~-~~~~~~~~SpDGk~l 346 (954)
....|++++.+|+...+.. . .....+++++||+..
T Consensus 118 ------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 155 (299)
T 2z2n_A 118 ------------------------------------------NGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALW 155 (299)
T ss_dssp ------------------------------------------TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred ------------------------------------------CCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEE
Confidence 1234677777555444322 2 445678899999644
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
+ .... ...+++++. +++...+.. +.. ...+..+.+++||+ + |+.+
T Consensus 156 v-~~~~------------~~~i~~~~~-~g~~~~~~~-~~~----------~~~~~~i~~~~~g~-l-~v~~-------- 200 (299)
T 2z2n_A 156 F-TENQ------------NNAIGRITE-SGDITEFKI-PTP----------ASGPVGITKGNDDA-L-WFVE-------- 200 (299)
T ss_dssp E-EETT------------TTEEEEECT-TCCEEEEEC-SST----------TCCEEEEEECTTSS-E-EEEE--------
T ss_pred E-EeCC------------CCEEEEEcC-CCcEEEeeC-CCC----------CCcceeEEECCCCC-E-EEEc--------
Confidence 3 3311 127888888 444443311 100 02345688999987 3 3321
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEee--cccccCceeeccCCceEEEEEeccccceEEEEEcCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPG 489 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~ 489 (954)
...+.|++++. + ++...+.. ....+..++++++|+ |+++.... ..|++++.+
T Consensus 201 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~---~~i~~~d~~ 254 (299)
T 2z2n_A 201 ---IIGNKIGRITT---S-GEITEFKIPTPNARPHAITAGAGID-LWFTEWGA---NKIGRLTSN 254 (299)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTT---TEEEEEETT
T ss_pred ---cCCceEEEECC---C-CcEEEEECCCCCCCceeEEECCCCC-EEEeccCC---ceEEEECCC
Confidence 12447888873 3 33333321 223456788999987 55443222 458888874
No 460
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.22 E-value=0.0045 Score=72.67 Aligned_cols=166 Identities=13% Similarity=0.097 Sum_probs=100.2
Q ss_pred ccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-ccccCceeeccCCceEEEEEecccc
Q 002194 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSLALVYESWYKTR 479 (954)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~ 479 (954)
+..+.|.+.+.. +||++. ..+.|+.++. +|...+.+... -....++++.+.++.|+++....
T Consensus 351 ~~~ld~d~~~~~-ly~sD~-----------~~~~I~r~~~---~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~-- 413 (619)
T 3s94_A 351 AIAIDYDPVEGY-IYWTDD-----------EVRAIRRSFI---DGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGT-- 413 (619)
T ss_dssp EEEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT--
T ss_pred cEEEEEEcCCCe-EEEEeC-----------CCCeEEEEEc---CCCccEEEEECCCCCcCceEEecccCcEEEEeCCC--
Confidence 345778876554 455332 2457888885 56555555433 34567889988888888874332
Q ss_pred ceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCCCCCCCCeEEEEEC
Q 002194 480 RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI 559 (954)
Q Consensus 480 ~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 559 (954)
.+|.++++++. ..+.+.........+ +++.|...+|+|... +..+.|++.++
T Consensus 414 -~~I~v~~~~G~--~~~~l~~~~l~~P~~------iavdp~~G~ly~tD~-------------------g~~~~I~r~~~ 465 (619)
T 3s94_A 414 -DRIEVTRLNGT--MRKILISEDLEEPRA------IVLDPMVGYMYWTDW-------------------GEIPKIERAAL 465 (619)
T ss_dssp -TEEEEEETTSC--SCEEEECTTCCSEEE------EEEETTTTEEEEEEC-------------------SSSCEEEEEET
T ss_pred -CcEEEEeCCCC--eEEEEEECCCCCeee------EEEEcCCCcEEEecC-------------------CCCCEEEEEcc
Confidence 57899999875 334444332222122 566776566766652 12356999999
Q ss_pred CCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeEee
Q 002194 560 NTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (954)
Q Consensus 560 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~Lt 625 (954)
++...+.+....-. ... +.++++++++|++.-.. ...|..+++++...+.+.
T Consensus 466 dG~~~~~l~~~~l~----~P~-------GlalD~~~~~LY~aD~~---~~~I~~~~~dG~~~~~~~ 517 (619)
T 3s94_A 466 DGSDRVVLVNTSLG----WPN-------GLALDYDEGKIYWGDAK---TDKIEVMNTDGTGRRVLV 517 (619)
T ss_dssp TSCSCEEEECSSCS----CEE-------EEEEETTTTEEEEEETT---TTEEEEEESSSCCCEEEE
T ss_pred CCCccEEEEeCCCC----CCe-------eeEEcccCCEEEEEECC---CCEEEEEecCCCceEEEe
Confidence 87766655543211 111 24678888888876443 347888988766555553
No 461
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.21 E-value=3.2e-06 Score=90.97 Aligned_cols=88 Identities=17% Similarity=0.163 Sum_probs=64.5
Q ss_pred HHHHHHHHCCcE---EEEcCCCCCCCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHH
Q 002194 703 TSVLLWLARGFA---ILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLL 777 (954)
Q Consensus 703 ~~~~~la~~G~~---V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a 777 (954)
.....|+++||. |+. .+..|+|.+.... .......+++.+.++.+.+.. ..+++.|+||||||.++..++
T Consensus 72 ~l~~~L~~~Gy~~~~V~~---~D~~g~G~S~~~~~~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a 146 (342)
T 2x5x_A 72 SVYAELKARGYNDCEIFG---VTYLSSSEQGSAQYNYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATL 146 (342)
T ss_dssp CHHHHHHHTTCCTTSEEE---ECCSCHHHHTCGGGCCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEE---EeCCCCCccCCccccCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHH
Confidence 356778899998 888 4555655542221 112445677777777777653 235899999999999999999
Q ss_pred HhC--CCcccEEEEeccCCC
Q 002194 778 AHA--PHLFCCGIARSGAYN 795 (954)
Q Consensus 778 ~~~--p~~~~a~v~~~~~~~ 795 (954)
.++ |++++++|++++...
T Consensus 147 ~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 147 QYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHTCGGGEEEEEEESCCTT
T ss_pred HHcCchhhhcEEEEECCCcc
Confidence 988 889999999987643
No 462
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.21 E-value=0.00026 Score=78.62 Aligned_cols=225 Identities=11% Similarity=0.074 Sum_probs=134.2
Q ss_pred cceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCc----eEEEeccCCC
Q 002194 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI----FVRELCDLPL 386 (954)
Q Consensus 313 ~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~----~~~~l~~~~~ 386 (954)
...|.++++ .+....+... .....++|++++..|+++.... ..|+.+++++. ....+....
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~------------~~I~~~~~~g~~~~~~~~~~~~~~- 157 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISRD- 157 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC------CCCEEEECSS-
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCC------------CeEEEEEcccCCCCCcceEEEeCC-
Confidence 456888888 4444555444 6677889999888888876332 36888888763 222222211
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-ccccCceeecc
Q 002194 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCD 465 (954)
Q Consensus 387 ~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~sp 465 (954)
...+..+++.+.+.. +||++. ..+.|.++++ +|...+.+... .....+++..|
T Consensus 158 -----------~~~p~glavD~~~~~-lY~~d~-----------~~~~I~~~~~---~g~~~~~l~~~~~~~P~~iavdp 211 (400)
T 3p5b_L 158 -----------IQAPDGLAVDWIHSN-IYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 211 (400)
T ss_dssp -----------CSCEEEEEEETTTTE-EEEEET-----------TTTEEEEECT---TTCSEEEEEECSSCCEEEEEEET
T ss_pred -----------CCCcccEEEEecCCc-eEEEEC-----------CCCeEEEEeC---CCCceEEEEeCCCCCcceEEEec
Confidence 022345677765554 455332 2457888885 66666555443 33456789999
Q ss_pred CCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCC
Q 002194 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (954)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (954)
.+..|+++.+... .+|+++++++. ..+.+.........+ +++++++..|+|...
T Consensus 212 ~~g~ly~td~~~~--~~I~~~~~dG~--~~~~~~~~~l~~P~g------lavd~~~~~lY~aD~---------------- 265 (400)
T 3p5b_L 212 VHGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS---------------- 265 (400)
T ss_dssp TTTEEEEEECSSS--CCEEEEETTSC--SCEEEECSSCSCEEE------EEEETTTTEEEEEET----------------
T ss_pred ccCeEEEEeCCCC--CEEEEEeCCCC--ccEEEEECCCCceEE------EEEEeCCCEEEEEEC----------------
Confidence 9888988865432 57999999884 334443332222222 788888888888752
Q ss_pred CCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCc
Q 002194 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (954)
Q Consensus 546 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~ 620 (954)
....|+.+|++++..+.+...... ... ...+..+++.++++-+. ...|++++..+|+
T Consensus 266 ----~~~~I~~~d~dG~~~~~~~~~~~~--l~~---------P~gl~v~~~~lywtd~~---~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 266 ----KLHSISSIDVNGGNRKTILEDEKR--LAH---------PFSLAVFEDKVFWTDII---NEAIFSANRLTGS 322 (400)
T ss_dssp ----TTTEEEEEETTSCCCEEEEECSST--TSS---------EEEEEEETTEEEEEESS---SCSEEEEESSSCC
T ss_pred ----CCCEEEEEeCCCCccEEEEeCCCC--CCC---------CEEEEEeCCEEEEecCC---CCeEEEEEcCCCC
Confidence 134699999988777666543221 000 12234456667665532 3457777755554
No 463
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.20 E-value=0.00073 Score=71.26 Aligned_cols=191 Identities=16% Similarity=0.109 Sum_probs=106.0
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
.+..+.++|||+ |++... ....|++++.+ ++...+...... ..+..+++++||++.+.. .
T Consensus 16 ~~~~i~~d~~g~-l~v~~~--------~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 75 (299)
T 2z2n_A 16 GPYGITVSDKGK-VWITQH--------KANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTE-N------ 75 (299)
T ss_dssp CEEEEEECTTSC-EEEEET--------TTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEE-T------
T ss_pred CccceEECCCCC-EEEEec--------CCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeC-C------
Confidence 467788899997 444321 24579999988 665544321111 115578888999755433 0
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCC--C-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~--~-~~~~~~~~SpDGk~l 346 (954)
....|++++.+|..+.+.. . .....++++|||+..
T Consensus 76 ------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 113 (299)
T 2z2n_A 76 ------------------------------------------AANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIW 113 (299)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred ------------------------------------------CCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEE
Confidence 1234667776554443331 2 455678889998644
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
+... . ...+++++.++. ...+.... . ...+..+++.+||+ +++. .
T Consensus 114 v~~~-~------------~~~i~~~d~~g~-~~~~~~~~-~----------~~~~~~i~~~~~g~-l~v~-~-------- 158 (299)
T 2z2n_A 114 FTEM-N------------GNRIGRITDDGK-IREYELPN-K----------GSYPSFITLGSDNA-LWFT-E-------- 158 (299)
T ss_dssp EEET-T------------TTEEEEECTTCC-EEEEECSS-T----------TCCEEEEEECTTSC-EEEE-E--------
T ss_pred EEec-C------------CceEEEECCCCC-EEEecCCC-C----------CCCCceEEEcCCCC-EEEE-e--------
Confidence 3332 1 126888888443 33322110 0 02345688999985 3332 1
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEe--ecccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
...+.|++++. .++...+. ........++++++|+ |+++.... ..|++++.
T Consensus 159 ---~~~~~i~~~~~----~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~---~~i~~~~~ 211 (299)
T 2z2n_A 159 ---NQNNAIGRITE----SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIG---NKIGRITT 211 (299)
T ss_dssp ---TTTTEEEEECT----TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT---TEEEEECT
T ss_pred ---CCCCEEEEEcC----CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCC---ceEEEECC
Confidence 12347888873 34444331 1223345688899987 44443222 46899998
No 464
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.19 E-value=0.00017 Score=75.73 Aligned_cols=80 Identities=15% Similarity=0.003 Sum_probs=47.4
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccc
Q 002194 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (954)
Q Consensus 163 ~~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (954)
..|++++..+ | ....++.. ........+.++|||+.|+ +. ...|+.+|.++....++.......
T Consensus 15 ~~v~~~d~~t-G--~~~w~~~~-~~~~~~~~~~~~pdG~ilv-s~----------~~~V~~~d~~G~~~W~~~~~~~~~- 78 (276)
T 3no2_A 15 NKIAIINKDT-K--EIVWEYPL-EKGWECNSVAATKAGEILF-SY----------SKGAKMITRDGRELWNIAAPAGCE- 78 (276)
T ss_dssp SEEEEEETTT-T--EEEEEEEC-CTTCCCCEEEECTTSCEEE-EC----------BSEEEEECTTSCEEEEEECCTTCE-
T ss_pred CEEEEEECCC-C--eEEEEeCC-CccCCCcCeEECCCCCEEE-eC----------CCCEEEECCCCCEEEEEcCCCCcc-
Confidence 4788888643 2 22333331 1112467788999998665 21 346888898544444443321111
Q ss_pred cccccceeEecCCeEEEEE
Q 002194 243 NAIFDNFVWVNNSTLLVCT 261 (954)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~ 261 (954)
+..+.+++||++|+..
T Consensus 79 ---~~~~~~~~dG~~lv~~ 94 (276)
T 3no2_A 79 ---MQTARILPDGNALVAW 94 (276)
T ss_dssp ---EEEEEECTTSCEEEEE
T ss_pred ---ccccEECCCCCEEEEe
Confidence 4577899999988865
No 465
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.19 E-value=0.00014 Score=77.90 Aligned_cols=186 Identities=12% Similarity=0.059 Sum_probs=113.9
Q ss_pred ceEEEEEECCCCc--eeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechh
Q 002194 218 KLRVWVADVDTGK--ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTF 295 (954)
Q Consensus 218 ~~~l~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 295 (954)
...|.+++++++. ...+...... ...+.|.+.+..|+++-.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~-----~~~ld~d~~~~~lyw~D~-------------------------------- 54 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLED-----AAAVDFVFSHGLIYWSDV-------------------------------- 54 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEE-----EEEEEEEGGGTEEEEEET--------------------------------
T ss_pred cCeEEEEECCCCceEEEEEecCCCc-----cEEEEEEeCCCEEEEEEC--------------------------------
Confidence 5689999998863 2222111111 347889988777887610
Q ss_pred hhhccCccccccccccccceEEEEEeCCc---eeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEE
Q 002194 296 QDLLKDEYDEDLFDYYATTQLVLVSLDGT---VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVW 371 (954)
Q Consensus 296 ~d~l~~~~d~~~~~~~~~~~l~~~~~~G~---~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~ 371 (954)
....|++++++|. ...+... ....++++.+.+..|+++... ...|+++
T Consensus 55 ----------------~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~------------~~~I~~~ 106 (318)
T 3sov_A 55 ----------------SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------------TNRIEVS 106 (318)
T ss_dssp ----------------TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred ----------------CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC------------CCEEEEE
Confidence 2345888888432 1222222 445567888878888776532 2378899
Q ss_pred eccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEE
Q 002194 372 TTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL 451 (954)
Q Consensus 372 d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l 451 (954)
+++|...+.+..... ..++.++..|++.. +||++. .....|+++++ +|...+.+
T Consensus 107 ~~dG~~~~~l~~~~~------------~~P~giavdp~~g~-ly~td~----------~~~~~I~r~~~---dG~~~~~~ 160 (318)
T 3sov_A 107 NLDGSLRKVLFWQEL------------DQPRAIALDPSSGF-MYWTDW----------GEVPKIERAGM---DGSSRFII 160 (318)
T ss_dssp ETTSCSCEEEECSSC------------SSEEEEEEEGGGTE-EEEEEC----------SSSCEEEEEET---TSCSCEEE
T ss_pred ECCCCcEEEEEeCCC------------CCccEEEEeCCCCE-EEEEec----------CCCCEEEEEEc---CCCCeEEE
Confidence 998876555432111 23457888887664 455332 12457999986 66655555
Q ss_pred eec-ccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002194 452 HKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (954)
Q Consensus 452 ~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 499 (954)
... -....+++|+++++.|+++.... .+|++++.++. ..+.+.
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~~~---~~I~~~d~dG~--~~~~~~ 204 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADAKL---NFIHKSNLDGT--NRQAVV 204 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC--SCEEEE
T ss_pred EECCCCCccEEEEeccCCEEEEEECCC---CEEEEEcCCCC--ceEEEe
Confidence 332 23456799999999999885433 57999999874 334443
No 466
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.14 E-value=0.0057 Score=71.76 Aligned_cols=124 Identities=4% Similarity=-0.138 Sum_probs=74.4
Q ss_pred cCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcE
Q 002194 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTY 537 (954)
Q Consensus 458 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~ 537 (954)
...++|.+.+..|+++.... .+|+++++++. ....+.........+ +++.+.+..|++...
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~---~~I~r~~~~g~--~~~~v~~~~~~~p~G------lAvD~~~~~lY~tD~-------- 411 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEV---RAIRRSFIDGS--GSQFVVTAQIAHPDG------IAVDWVARNLYWTDT-------- 411 (619)
T ss_dssp EEEEEEETTTTEEEEEETTT---TEEEEEETTSC--SCEEEECSSCSCCCE------EEEETTTTEEEEEET--------
T ss_pred cEEEEEEcCCCeEEEEeCCC---CeEEEEEcCCC--ccEEEEECCCCCcCc------eEEecccCcEEEEeC--------
Confidence 34577888778888875432 46999998874 233333322222222 566666666666641
Q ss_pred EEEecCCCCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECC
Q 002194 538 ILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWP 617 (954)
Q Consensus 538 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~ 617 (954)
....|.+.++++...+.|....- ..+. ..++.|..+.|+++-.+. ...|++.+++
T Consensus 412 ------------~~~~I~v~~~~G~~~~~l~~~~l----~~P~-------~iavdp~~G~ly~tD~g~--~~~I~r~~~d 466 (619)
T 3s94_A 412 ------------GTDRIEVTRLNGTMRKILISEDL----EEPR-------AIVLDPMVGYMYWTDWGE--IPKIERAALD 466 (619)
T ss_dssp ------------TTTEEEEEETTSCSCEEEECTTC----CSEE-------EEEEETTTTEEEEEECSS--SCEEEEEETT
T ss_pred ------------CCCcEEEEeCCCCeEEEEEECCC----CCee-------eEEEEcCCCcEEEecCCC--CCEEEEEccC
Confidence 12358888888776665553321 1122 245777777888876643 5679999877
Q ss_pred CCceeEee
Q 002194 618 DKKSCQIT 625 (954)
Q Consensus 618 ~g~~~~Lt 625 (954)
+...+.+.
T Consensus 467 G~~~~~l~ 474 (619)
T 3s94_A 467 GSDRVVLV 474 (619)
T ss_dssp SCSCEEEE
T ss_pred CCccEEEE
Confidence 66555554
No 467
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.14 E-value=3.9e-06 Score=93.94 Aligned_cols=107 Identities=11% Similarity=-0.060 Sum_probs=71.6
Q ss_pred ccEEEEECCCCCcCcccCccccCCCCCCCCcccHHHHHHHH-CCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHH
Q 002194 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (954)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~a 746 (954)
.|+||++||.... ....|.......+++ .+|.|++ .|..|+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~---vD~~g~g~s~y~~~~~~~~~~a~~l~~l 133 (450)
T 1rp1_A 70 KKTRFIIHGFIDK-------------GEENWLLDMCKNMFKVEEVNCIC---VDWKKGSQTSYTQAANNVRVVGAQVAQM 133 (450)
T ss_dssp SEEEEEECCCCCT-------------TCTTHHHHHHHHHTTTCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCCCC-------------CCcchHHHHHHHHHhcCCeEEEE---EeCccccCCcchHHHHHHHHHHHHHHHH
Confidence 5899999995311 000111112334444 4899999 445555544221 11233456777888
Q ss_pred HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcccEEEEeccC
Q 002194 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (954)
Q Consensus 747 v~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (954)
+++|.++..++.+++.|+||||||.+|+.++.+.|+ ++.++.+.|.
T Consensus 134 l~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred HHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 888865433567899999999999999999999998 9999988775
No 468
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.13 E-value=0.0003 Score=75.36 Aligned_cols=224 Identities=8% Similarity=-0.008 Sum_probs=132.2
Q ss_pred cceEEEEEeCCc---eeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCc
Q 002194 313 TTQLVLVSLDGT---VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLA 387 (954)
Q Consensus 313 ~~~l~~~~~~G~---~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~ 387 (954)
...|.++++++. ...+... .....++|.+++..|+++... ...|+.++.+++.. ..+....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~------------~~~I~r~~~~g~~~~~~~~~~~-- 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS------------EEAIKRTEFNKTESVQNVVVSG-- 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT------------TTEEEEEETTSSSCCCEEEEEC--
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC------------CCcEEEEEccCCCceEEEEcCC--
Confidence 356888998442 2223222 445678899888888777532 23788888886532 1111100
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe-ecccccCceeeccC
Q 002194 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDD 466 (954)
Q Consensus 388 ~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~spD 466 (954)
...+..+++.+.+..| ||++. ..+.|.++++ +|...+.+. .......++++.|+
T Consensus 78 ----------l~~p~glavd~~~g~l-y~~d~-----------~~~~I~~~~~---dG~~~~~l~~~~~~~P~giavdp~ 132 (318)
T 3sov_A 78 ----------LLSPDGLACDWLGEKL-YWTDS-----------ETNRIEVSNL---DGSLRKVLFWQELDQPRAIALDPS 132 (318)
T ss_dssp ----------CSCCCEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEEEGG
T ss_pred ----------CCCccEEEEEcCCCeE-EEEEC-----------CCCEEEEEEC---CCCcEEEEEeCCCCCccEEEEeCC
Confidence 0223467787766544 55332 2457888885 666555554 33334567899998
Q ss_pred CceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCC
Q 002194 467 SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (954)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (954)
+..|+++.+... .+|+++++++. ..+.+.........+ +++++++..|+|...
T Consensus 133 ~g~ly~td~~~~--~~I~r~~~dG~--~~~~~~~~~l~~Png------lavd~~~~~lY~aD~----------------- 185 (318)
T 3sov_A 133 SGFMYWTDWGEV--PKIERAGMDGS--SRFIIINSEIYWPNG------LTLDYEEQKLYWADA----------------- 185 (318)
T ss_dssp GTEEEEEECSSS--CEEEEEETTSC--SCEEEECSSCSCEEE------EEEETTTTEEEEEET-----------------
T ss_pred CCEEEEEecCCC--CEEEEEEcCCC--CeEEEEECCCCCccE------EEEeccCCEEEEEEC-----------------
Confidence 888888765432 67999999874 334443322222122 789999988888762
Q ss_pred CCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCce
Q 002194 547 PEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (954)
Q Consensus 547 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~ 621 (954)
....|+++|++++..+.+...... .. ..+..+++.++++.. ....|++++..+|+.
T Consensus 186 ---~~~~I~~~d~dG~~~~~~~~~~~~----~P---------~glav~~~~lywtd~---~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 186 ---KLNFIHKSNLDGTNRQAVVKGSLP----HP---------FALTLFEDILYWTDW---STHSILACNKYTGEG 241 (318)
T ss_dssp ---TTTEEEEEETTSCSCEEEECSCCS----CE---------EEEEEETTEEEEEET---TTTEEEEEETTTCCS
T ss_pred ---CCCEEEEEcCCCCceEEEecCCCC----Cc---------eEEEEeCCEEEEEec---CCCeEEEEECCCCCc
Confidence 234699999987766665532211 11 123334566666533 345688888755553
No 469
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.08 E-value=0.0011 Score=69.84 Aligned_cols=193 Identities=13% Similarity=0.067 Sum_probs=106.5
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
....+.+++||+ |+++. .+...|++++.+ ++.+.+...... ..+..+++.++|++.+.. .
T Consensus 63 ~~~~i~~~~~g~-l~v~~--------~~~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 122 (300)
T 2qc5_A 63 KVMCLIVSSLGD-IWFTE--------NGANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNGDIWFTQ-L------ 122 (300)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTTCEEEEE-T------
T ss_pred cceeEEECCCCC-EEEEe--------cCCCeEEEECCC-CCeEEecCCCCC---CCCccceECCCCCEEEEc-c------
Confidence 466678899996 44432 124579999988 555443221111 114577788888754432 0
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEc--CCC-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEI--GPP-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l--~~~-~~~~~~~~SpDGk~l 346 (954)
....|++++.+|+...+ ... .....+++++||+ |
T Consensus 123 ------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l 159 (300)
T 2qc5_A 123 ------------------------------------------NGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA-L 159 (300)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-E
T ss_pred ------------------------------------------CCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-E
Confidence 12346777766554433 212 4556788999998 4
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
++.... ...++.++.++. ...+.. +.. ...+..+.+.+||+ + |+.+
T Consensus 160 ~v~~~~------------~~~i~~~~~~g~-~~~~~~-~~~----------~~~~~~i~~d~~g~-l-~v~~-------- 205 (300)
T 2qc5_A 160 WFTENQ------------NNSIGRITNTGK-LEEYPL-PTN----------AAAPVGITSGNDGA-L-WFVE-------- 205 (300)
T ss_dssp EEEETT------------TTEEEEECTTCC-EEEEEC-SST----------TCCEEEEEECTTSS-E-EEEE--------
T ss_pred EEEecC------------CCeEEEECCCCc-EEEeeC-CCC----------CCCcceEEECCCCC-E-EEEc--------
Confidence 444321 126888888543 333321 100 02345688888885 3 3321
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEe--ecccccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
...+.|++++. + ++...+. .....+..++++++|+ |+++.... ..|++++.++
T Consensus 206 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~---~~i~~~~~~g 260 (300)
T 2qc5_A 206 ---IMGNKIGRITT---T-GEISEYDIPTPNARPHAITAGKNSE-IWFTEWGA---NQIGRITNDN 260 (300)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTT---TEEEEECTTS
T ss_pred ---cCCCEEEEEcC---C-CcEEEEECCCCCCCceEEEECCCCC-EEEeccCC---CeEEEECCCC
Confidence 12346888873 3 3333332 1223455688999987 55543322 4688998843
No 470
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.07 E-value=0.00043 Score=83.27 Aligned_cols=180 Identities=14% Similarity=-0.006 Sum_probs=115.8
Q ss_pred ceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh
Q 002194 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (954)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (954)
...|..+++++++...+...... ...++|.+.+..||++-.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~-----~~gl~~d~~~~~lY~sD~---------------------------------- 443 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 443 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSS-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred ccceeEeeccCCcceeeecCCCc-----eEEEeecccCCeeEEeec----------------------------------
Confidence 45688888887766655443222 457888887777877610
Q ss_pred hccCccccccccccccceEEEEEeCC-----ceeEcCC-C-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEE
Q 002194 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIGP-P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (954)
Q Consensus 298 ~l~~~~d~~~~~~~~~~~l~~~~~~G-----~~~~l~~-~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l 370 (954)
....|++++++| ....+.. . ....++++.+.|+.|+++... ...|++
T Consensus 444 --------------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~------------~~~I~v 497 (791)
T 3m0c_C 444 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 497 (791)
T ss_dssp --------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC------------CCeEEE
Confidence 223577888743 2233332 3 556678888889888887633 238999
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE
Q 002194 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (954)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (954)
.+++|+..+.+..... ..++.+++.|.+.. +||++.. ....|+++++ +|...+.
T Consensus 498 ~~ldG~~~~~l~~~~l------------~~P~gIaVDp~~g~-LYwtD~g----------~~~~I~~~~~---dG~~~~~ 551 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDWG----------TPAKIKKGGL---NGVDIYS 551 (791)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCCEEE
T ss_pred EeCCCCeEEEEEeCCC------------CCcceEEEecCCCC-EEEecCC----------CCCeEEEEec---CCCceEE
Confidence 9999887666644211 23467889887664 5664321 1257889886 7766666
Q ss_pred Eeecc-cccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 451 LHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 451 l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+.... ....++++.++++.|+++.... .+|+++++++.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~---~~I~~~d~dG~ 590 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 590 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCC---CcEEEEecCCC
Confidence 64433 3456789999999888874332 57999999885
No 471
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.07 E-value=7.7e-05 Score=89.20 Aligned_cols=229 Identities=10% Similarity=0.053 Sum_probs=134.1
Q ss_pred ccceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC----ceEEEeccCC
Q 002194 312 ATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLP 385 (954)
Q Consensus 312 ~~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g----~~~~~l~~~~ 385 (954)
....|+++++ +++...+... .....++|++++..|+++... ...|+.+++++ .....+...
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~------------~~~I~~~~~~g~~~~~~~~~~i~~- 450 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISR- 450 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTT------------TTSBEEEESCCCCC-CCCCCBCCS-
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecC------------CCeEEEEecCCCCCCcceEEEEeC-
Confidence 3456888888 5555555444 667788999988888776532 23788888876 221111110
Q ss_pred CcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-ccccCceeec
Q 002194 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWC 464 (954)
Q Consensus 386 ~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~s 464 (954)
....+..+++.+.+..| ||++ ...+.|+++++ ++...+.+... ......+++.
T Consensus 451 -----------~~~~P~glavD~~~g~L-Y~tD-----------~~~~~I~v~d~---dg~~~~~l~~~~~~~P~giavD 504 (699)
T 1n7d_A 451 -----------DIQAPDGLAVDWIHSNI-YWTD-----------SVLGTVSVADT---KGVKRKTLFREQGSKPRAIVVD 504 (699)
T ss_dssp -----------CC--CCCEECCCSSSBC-EECC-----------TTTSCEEEEBS---SSCCEEEECCCSSCCCCCEECC
T ss_pred -----------CCCCcceEEEEeeCCcE-EEEe-----------ccCCeEEEEec---CCCceEEEEeCCCCCcceEEEc
Confidence 00123457777666655 4422 12457888885 66655555432 3456789999
Q ss_pred cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCC
Q 002194 465 DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNG 544 (954)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~ 544 (954)
|++..|+++.+.. ..+|+++++++. ..+.+.........+ ++++|++++|+|...
T Consensus 505 p~~g~ly~td~~~--~~~I~~~~~dG~--~~~~l~~~~l~~PnG------lavd~~~~~LY~aD~--------------- 559 (699)
T 1n7d_A 505 PVHGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS--------------- 559 (699)
T ss_dssp SSSSCCEECCCSS--SCCEEBCCSSSC--CCCEESCSSCSSCCC------EEECTTTCCEEEEET---------------
T ss_pred cCCCcEEEcccCC--CCeEEEEeCCCC--CeeEEEeCCCCCccE------EEEeccCCEEEEEec---------------
Confidence 9988888875433 257999998874 223332222221122 889999988888762
Q ss_pred CCCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCceeE
Q 002194 545 ATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (954)
Q Consensus 545 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~~~ 623 (954)
....|+++++++...+.+...... ......+..|++.++++.+ ....|++++..+|+..+
T Consensus 560 -----~~~~I~~~d~dG~~~~~~~~~~~~-----------~~~P~glavd~~~lywtd~---~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 560 -----KLHSISSIDVNGGNRKTILEDEKR-----------LAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGSDVN 619 (699)
T ss_dssp -----TTTEEEEECSSSSCCEEECCCSSS-----------CSSCCCCEEETTEEEEECS---TTTCEEEEETTTEEEEE
T ss_pred -----CCCeEEEEccCCCceEEEEecCCc-----------CCCceEeEEECCEEEEEeC---CCCeEEEEEccCCCceE
Confidence 124599999987665555432211 0011234556676666543 34568888876665433
No 472
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.03 E-value=0.0011 Score=79.81 Aligned_cols=225 Identities=11% Similarity=0.067 Sum_probs=133.1
Q ss_pred cceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCc----eEEEeccCCC
Q 002194 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI----FVRELCDLPL 386 (954)
Q Consensus 313 ~~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~----~~~~l~~~~~ 386 (954)
...|..+++ .+....+... .....++|++.+..|+++.... ..|+.+++++. ....+....
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~------------~~I~~~~l~g~~~~~~~~~vi~~~- 469 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISRD- 469 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTT------------TEEEEEEC--------CEEEECSS-
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccc------------eeEEEEeccCCCCCcceeEEEecC-
Confidence 345777777 4444555444 5667788888777887776332 36888888763 222222211
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-ccccCceeecc
Q 002194 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCD 465 (954)
Q Consensus 387 ~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~sp 465 (954)
...+..+++.+.++.| ||++. ..+.|+++++ +|...+.|... .....++++.|
T Consensus 470 -----------l~~P~GLAvD~~~~~L-Y~tD~-----------~~~~I~v~~l---dG~~~~~l~~~~l~~P~gIaVDp 523 (791)
T 3m0c_C 470 -----------IQAPDGLAVDWIHSNI-YWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 523 (791)
T ss_dssp -----------CSCCCEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEEET
T ss_pred -----------CCCcceeeeeecCCcE-EEEec-----------CCCeEEEEeC---CCCeEEEEEeCCCCCcceEEEec
Confidence 1234567888777654 55332 2458999986 67666666443 33467899999
Q ss_pred CCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCC
Q 002194 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (954)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (954)
.+..|+++.+... .+|+++++++. ..+.+.........+ +++.+++..|+|...
T Consensus 524 ~~g~LYwtD~g~~--~~I~~~~~dG~--~~~~lv~~~l~~P~G------LavD~~~~~LYwaD~---------------- 577 (791)
T 3m0c_C 524 VHGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS---------------- 577 (791)
T ss_dssp TTTEEEEEECSSS--CEEEEEETTSC--CEEEEECSSCSCEEE------EEEETTTTEEEEEET----------------
T ss_pred CCCCEEEecCCCC--CeEEEEecCCC--ceEEEEeCCCCCceE------EEEecCCCeEEEEeC----------------
Confidence 9889998865442 57999999884 334444332222222 677777777777751
Q ss_pred CCCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCc
Q 002194 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (954)
Q Consensus 546 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~ 620 (954)
....|+++++++...+.+...... . .....++.++++|+++-+ ....|++++..+|+
T Consensus 578 ----~~~~I~~~d~dG~~~~~v~~~~~~--l---------~~P~glav~~~~lYwtD~---~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 578 ----KLHSISSIDVNGGNRKTILEDEKR--L---------AHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 634 (791)
T ss_dssp ----TTTEEEEEETTSCSCEEEEECTTT--T---------SSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred ----CCCcEEEEecCCCceEEEecCCCc--c---------CCCCEEEEeCCEEEEEEC---CCCEEEEEeCCCCc
Confidence 124699999988877776654321 0 011234445666665443 23567777755553
No 473
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.03 E-value=1.5e-05 Score=73.20 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=46.1
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC
Q 002194 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (954)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 782 (954)
+++|.|+. .+..|+|.+...........+|+.+.++.+ +.+++.++|||+||.+++.++.++|.
T Consensus 40 ~~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 40 PEGYAFYL---LDLPGYGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CTTSEEEE---ECCTTSTTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hCCcEEEE---ECCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 34599999 566777777554332445555555555543 34589999999999999999999875
No 474
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.02 E-value=0.00012 Score=87.62 Aligned_cols=180 Identities=14% Similarity=-0.025 Sum_probs=110.1
Q ss_pred ceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhh
Q 002194 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (954)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (954)
...|+++++++++...+...... ...++|.+++..||++-.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~-----p~gla~d~~~~~Ly~sD~---------------------------------- 425 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 425 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTT-----CCCCEEETTTTEEEECCT----------------------------------
T ss_pred ccceEEEeCCCCcceeeeccCcc-----eEEEccccccCeEEEEec----------------------------------
Confidence 34788889888776655433222 457899998888887600
Q ss_pred hccCccccccccccccceEEEEEeCC-----ceeEcC-CC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEE
Q 002194 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (954)
Q Consensus 298 ~l~~~~d~~~~~~~~~~~l~~~~~~G-----~~~~l~-~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l 370 (954)
....|++++++| ....+. .. .....+++.+.++.|+++... ...|++
T Consensus 426 --------------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~------------~~~I~v 479 (699)
T 1n7d_A 426 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 479 (699)
T ss_dssp --------------TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT------------TSCEEE
T ss_pred --------------CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc------------CCeEEE
Confidence 123477777743 222222 22 344567777777777665422 237889
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceE
Q 002194 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (954)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (954)
++++|+..+.+..... ..++.+++.|++..| ||++. .....|+++++ +|...+.
T Consensus 480 ~d~dg~~~~~l~~~~~------------~~P~giavDp~~g~l-y~td~----------~~~~~I~~~~~---dG~~~~~ 533 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQG------------SKPRAIVVDPVHGFM-YWTDW----------GTPAKIKKGGL---NGVDIYS 533 (699)
T ss_dssp EBSSSCCEEEECCCSS------------CCCCCEECCSSSSCC-EECCC----------SSSCCEEBCCS---SSCCCCE
T ss_pred EecCCCceEEEEeCCC------------CCcceEEEccCCCcE-EEccc----------CCCCeEEEEeC---CCCCeeE
Confidence 9998876665543211 234578899987755 44221 11257888875 5555555
Q ss_pred Eee-cccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 451 LHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 451 l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+.. .-....+++|+|+++.|+++.... .+|+++++++.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~---~~I~~~d~dG~ 572 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 572 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTT---TEEEEECSSSS
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCC---CeEEEEccCCC
Confidence 532 233457899999999998875432 57999999874
No 475
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.02 E-value=0.00024 Score=73.15 Aligned_cols=198 Identities=10% Similarity=0.014 Sum_probs=115.1
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
.....|+||| +|+.+.. ..+...|.++|+++|+..+-...+... .....+.+|+.|+.+.-
T Consensus 23 ~~Gl~~~~dg-~Lyvstg------~~~~s~v~~iD~~tg~v~~~i~l~~~~-----fgeGi~~~g~~lyv~t~------- 83 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTG------LYGRSSVRQVALQTGKVENIHKMDDSY-----FGEGLTLLNEKLYQVVW------- 83 (266)
T ss_dssp EEEEEECSTT-EEEEEEC------STTTCEEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEET-------
T ss_pred cccEEEeCCC-eEEEECC------CCCCCEEEEEECCCCCEEEEEecCCCc-----ceEEEEEeCCEEEEEEe-------
Confidence 4568899996 5555431 235689999999999876654433321 12234455777876610
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCCccccccccCCCCcEEEE
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPPAVYTSLDPSPDEKYILI 348 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~~~~~~~~~SpDGk~l~~ 348 (954)
....++++|. +++ ...+..+ ......+++||++++.
T Consensus 84 -----------------------------------------~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~v 121 (266)
T 2iwa_A 84 -----------------------------------------LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYG 121 (266)
T ss_dssp -----------------------------------------TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEE
T ss_pred -----------------------------------------cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEE
Confidence 2345888998 664 3444322 1234568889999876
Q ss_pred EeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccc
Q 002194 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (954)
Q Consensus 349 ~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~ 427 (954)
+. . ...++++|.++.+ .+.+..... ..|. .....+.|. ||+ +|...
T Consensus 122 s~-g------------s~~l~viD~~t~~v~~~I~Vg~~--~~p~------~~~nele~~-dg~--lyvn~--------- 168 (266)
T 2iwa_A 122 SD-G------------TSILYEIDPHTFKLIKKHNVKYN--GHRV------IRLNELEYI-NGE--VWANI--------- 168 (266)
T ss_dssp EC-S------------SSEEEEECTTTCCEEEEEECEET--TEEC------CCEEEEEEE-TTE--EEEEE---------
T ss_pred EC-C------------CCeEEEEECCCCcEEEEEEECCC--Cccc------ccceeEEEE-CCE--EEEec---------
Confidence 53 2 1288999988744 344443211 0111 112356677 663 44421
Q ss_pred cccCCCeEEEEecCCCCCCCc-eEEeecc-------------cccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 428 EVTPRDIIYTQQAEPVQGEGP-EILHKLD-------------LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~-~~l~~~~-------------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
...+.|.++|. .+++. ..+.-.. ....+++|+||+++++.+... ..+|+.+++..
T Consensus 169 --~~~~~V~vID~---~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---~~~v~~i~l~~ 237 (266)
T 2iwa_A 169 --WQTDCIARISA---KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---WPKLFEIKLHL 237 (266)
T ss_dssp --TTSSEEEEEET---TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---CSEEEEEEEEE
T ss_pred --CCCCeEEEEEC---CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC---CCeEEEEEEec
Confidence 22458999995 44444 4443211 123679999999987776432 25688887654
No 476
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.99 E-value=0.00081 Score=71.72 Aligned_cols=243 Identities=14% Similarity=0.093 Sum_probs=123.1
Q ss_pred eeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEE
Q 002194 179 EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (954)
Q Consensus 179 ~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (954)
.+.+..++.+.....++|+|||+ |+++.. ....|++++.+++... ....+.. ...+++++||+ |
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~-lyv~d~--------~~~~I~~~d~~g~~~~-~~~~~~~-----p~gia~~~dG~-l 85 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGT-IFVTNH--------EVGEIVSITPDGNQQI-HATVEGK-----VSGLAFTSNGD-L 85 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSC-EEEEET--------TTTEEEEECTTCCEEE-EEECSSE-----EEEEEECTTSC-E
T ss_pred ceEeEeCCCCCCcceEEECCCCC-EEEEeC--------CCCeEEEECCCCceEE-EEeCCCC-----ceeEEEcCCCc-E
Confidence 33444454444566789999997 655431 2567999998875433 3222221 45788999998 4
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCceeEcCCC---ccc
Q 002194 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP---AVY 334 (954)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~~~~l~~~---~~~ 334 (954)
+++... . ...+|+.++. +|+.+.+... ...
T Consensus 86 ~vad~~--------------------~--------------------------~~~~v~~~d~~~g~~~~~~~~~~~~~~ 119 (306)
T 2p4o_A 86 VATGWN--------------------A--------------------------DSIPVVSLVKSDGTVETLLTLPDAIFL 119 (306)
T ss_dssp EEEEEC--------------------T--------------------------TSCEEEEEECTTSCEEEEEECTTCSCE
T ss_pred EEEecc--------------------C--------------------------CcceEEEEcCCCCeEEEEEeCCCcccc
Confidence 444100 0 1124777776 7766554321 112
Q ss_pred cccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCC-CcccCCccccccccCccceeeccCCCCc
Q 002194 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP-LAEDIPIAFNSVRKGMRSINWRSDKPST 413 (954)
Q Consensus 335 ~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~-~~~~~p~~~~~~~~g~~~~~wspDg~~i 413 (954)
..++..+++ .+++.. .. .+.||.+|.+++..+.....+ .....+. ........+ +|||+.+
T Consensus 120 ~g~~~~~~~-~~~v~d-~~-----------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~---~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 120 NGITPLSDT-QYLTAD-SY-----------RGAIWLIDVVQPSGSIWLEHPMLARSNSE---SVFPAANGL--KRFGNFL 181 (306)
T ss_dssp EEEEESSSS-EEEEEE-TT-----------TTEEEEEETTTTEEEEEEECGGGSCSSTT---CCSCSEEEE--EEETTEE
T ss_pred CcccccCCC-cEEEEE-CC-----------CCeEEEEeCCCCcEeEEEECCcccccccc---CCCCcCCCc--CcCCCEE
Confidence 233334444 333332 11 237888888754322210000 0000000 000122334 8998765
Q ss_pred eEEEEeccCCCccccccCCCeEEEEecCCCCCC--CceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
++. + ...+.|++++++. ++. ..+.+.. ......+++++||+ | |.++..+ .+|++++.++
T Consensus 182 yv~-d-----------~~~~~I~~~~~~~-~g~~~~~~~~~~-~~~P~gi~vd~dG~-l-~va~~~~--~~V~~~~~~G- 242 (306)
T 2p4o_A 182 YVS-N-----------TEKMLLLRIPVDS-TDKPGEPEIFVE-QTNIDDFAFDVEGN-L-YGATHIY--NSVVRIAPDR- 242 (306)
T ss_dssp EEE-E-----------TTTTEEEEEEBCT-TSCBCCCEEEEE-SCCCSSEEEBTTCC-E-EEECBTT--CCEEEECTTC-
T ss_pred EEE-e-----------CCCCEEEEEEeCC-CCCCCccEEEec-cCCCCCeEECCCCC-E-EEEeCCC--CeEEEECCCC-
Confidence 554 2 2245899998621 111 1222222 23467799999996 4 4433332 4688898864
Q ss_pred CCCcEEEec--CCCCCccCCCCCCCeeec---cCCcEEEEEE
Q 002194 492 DVAPRILFD--RSSEDVYSDPGSPMMRRT---STGTYVIAKI 528 (954)
Q Consensus 492 ~~~~~~l~~--~~~~~~~~~~~~~~~~~s---pdG~~l~~~~ 528 (954)
+...+.. .......+ ++|. ||+++|+...
T Consensus 243 --~~~~~~~~~~~~~~p~~------~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 243 --STTIIAQAEQGVIGSTA------VAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp --CEEEEECGGGTCTTEEE------EEECCSTTTTTEEEEEE
T ss_pred --CEEEEeecccccCCceE------EEEecccCCCCEEEEEC
Confidence 2222211 11111111 6677 7888877765
No 477
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.99 E-value=0.00029 Score=72.50 Aligned_cols=175 Identities=9% Similarity=-0.022 Sum_probs=99.4
Q ss_pred cceEEEEEe-CCceeE-cCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE-EEeccCCCccc
Q 002194 313 TTQLVLVSL-DGTVKE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAED 389 (954)
Q Consensus 313 ~~~l~~~~~-~G~~~~-l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~-~~l~~~~~~~~ 389 (954)
.+.|..+|+ +|+... +.-+.......++++|+.|+..... .+.++++|.++.+. ..+...
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~------------~~~v~viD~~t~~v~~~i~~g----- 105 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL------------KNIGFIYDRRTLSNIKNFTHQ----- 105 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT------------CSEEEEEETTTTEEEEEEECC-----
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec------------CCEEEEEECCCCcEEEEEECC-----
Confidence 456999999 886443 3222222222344567777666532 24899999986543 444321
Q ss_pred CCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecc--c---ccCceeec
Q 002194 390 IPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD--L---RYGGISWC 464 (954)
Q Consensus 390 ~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~--~---~~~~~~~s 464 (954)
. ...+..++||++++.. ...+.|+++|. .+....+.+.-.. . ....+.|.
T Consensus 106 ~----------~~g~glt~Dg~~l~vs-------------~gs~~l~viD~--~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 106 M----------KDGWGLATDGKILYGS-------------DGTSILYEIDP--HTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp S----------SSCCEEEECSSSEEEE-------------CSSSEEEEECT--TTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred C----------CCeEEEEECCCEEEEE-------------CCCCeEEEEEC--CCCcEEEEEEECCCCcccccceeEEEE
Confidence 0 1234578899887654 23558999984 3333344443221 1 23456777
Q ss_pred cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCC-------------CCccCCCCCCCeeeccCCcEEEEEEeec
Q 002194 465 DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS-------------EDVYSDPGSPMMRRTSTGTYVIAKIKKE 531 (954)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-------------~~~~~~~~~~~~~~spdG~~l~~~~~~~ 531 (954)
|| .|+...+.. ..|.++|+.++. .....+... ....+ ++++|+|+.++....
T Consensus 161 -dg-~lyvn~~~~---~~V~vID~~tg~--V~~~I~~~g~~~~~~~~~~~~~~v~nG------Ia~~~~~~~lfVTgk-- 225 (266)
T 2iwa_A 161 -NG-EVWANIWQT---DCIARISAKDGT--LLGWILLPNLRKKLIDEGFRDIDVLNG------IAWDQENKRIFVTGK-- 225 (266)
T ss_dssp -TT-EEEEEETTS---SEEEEEETTTCC--EEEEEECHHHHHHHHHTTCTTCCCEEE------EEEETTTTEEEEEET--
T ss_pred -CC-EEEEecCCC---CeEEEEECCCCc--EEEEEECCCcccccccccccccCceEE------EEEcCCCCEEEEECC--
Confidence 66 455444333 479999999873 222222110 01122 789999988776652
Q ss_pred cCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002194 532 NDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (954)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 562 (954)
..+.|+.+++.+.
T Consensus 226 ------------------~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 226 ------------------LWPKLFEIKLHLV 238 (266)
T ss_dssp ------------------TCSEEEEEEEEEC
T ss_pred ------------------CCCeEEEEEEecc
Confidence 3567888888654
No 478
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.98 E-value=0.0012 Score=71.81 Aligned_cols=178 Identities=13% Similarity=0.042 Sum_probs=90.8
Q ss_pred ceEEEEEe-CCc-eeEcCCC-------ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccC
Q 002194 314 TQLVLVSL-DGT-VKEIGPP-------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDL 384 (954)
Q Consensus 314 ~~l~~~~~-~G~-~~~l~~~-------~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~ 384 (954)
..|+++|+ +|+ .+.+..+ ....+++++|++..++++..... ....|++||+++++..++...
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~---------~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD---------DKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG---------GGCEEEEEETTTCCEEEECTT
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC---------CCCeEEEEECCCCCEEEEecC
Confidence 46889998 776 3333221 23467788987776655542100 023788999986554443321
Q ss_pred -CCccc--CCccccc--------------cccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCC
Q 002194 385 -PLAED--IPIAFNS--------------VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG 447 (954)
Q Consensus 385 -~~~~~--~p~~~~~--------------~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 447 (954)
+.... ..+..++ ...+...++|||||+.+++. + .....+|.++.+....+.
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~-~-----------~~~~~l~~~~~~~~~~~~ 231 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLS-P-----------MHSTSMYRIKSADLSNLQ 231 (343)
T ss_dssp CTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEE-E-----------SSCSEEEEEEHHHHTCTT
T ss_pred CCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEE-e-----------CCCCeEEEEEHHHhcCCC
Confidence 11000 0000111 11245679999999876655 1 113378888731111111
Q ss_pred c--------eEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecCC-CCCccCCCCCCCeeec
Q 002194 448 P--------EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRRT 518 (954)
Q Consensus 448 ~--------~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~s 518 (954)
. ...........++++++||. |+++.... .+|++++..++ +...+...+ .....+ ++++
T Consensus 232 ~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~---~~V~~~d~~~G--~~~~~~~~~~~~~p~~------va~~ 299 (343)
T 2qe8_A 232 LTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAH---SAIGVITSADR--AYKLLVTDEKLSWTDS------FNFG 299 (343)
T ss_dssp CCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGG---TEEEEEETTTT--EEEEEEECGGGSCEEE------EEEC
T ss_pred CChhhhhcceEecccCCCCceEEECCCCC-EEEEccCC---CeEEEEECCCC--CEEEEEECCceecCCe------eEEC
Confidence 0 01112233456799999985 44443332 46889998433 233333221 111112 6788
Q ss_pred cCCcEE
Q 002194 519 STGTYV 524 (954)
Q Consensus 519 pdG~~l 524 (954)
+||+.+
T Consensus 300 ~~g~l~ 305 (343)
T 2qe8_A 300 SDGYLY 305 (343)
T ss_dssp TTSCEE
T ss_pred CCCcEE
Confidence 887643
No 479
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.98 E-value=0.00097 Score=72.40 Aligned_cols=143 Identities=10% Similarity=0.064 Sum_probs=75.9
Q ss_pred eEEEEEeCCceeEcCC-------C-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCC
Q 002194 315 QLVLVSLDGTVKEIGP-------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLP 385 (954)
Q Consensus 315 ~l~~~~~~G~~~~l~~-------~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~ 385 (954)
.|+.++ +|+...+.. . ....+++++|||+..+..... . . .....|++||+++++ .+.+....
T Consensus 43 ~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~-~----~---~~~~~i~~~d~~tg~~~~~~~~~~ 113 (343)
T 2qe8_A 43 QVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGN-Q----S---KSVPKLVAWDTLNNQLSRVIYLPP 113 (343)
T ss_dssp SEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHH-H----H---TSCCEEEEEETTTTEEEEEEECCT
T ss_pred EEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCC-C----c---CCCCeEEEEECCCCeEEEEEECCh
Confidence 466666 665543321 1 345678899998744433211 0 0 002379999998666 44443211
Q ss_pred CcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec-----------
Q 002194 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------- 454 (954)
Q Consensus 386 ~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~----------- 454 (954)
.. ..+ ......++++|++.. +|..+... .....|++++. .+++..++...
T Consensus 114 ~~-~~~------~~~~~~v~vd~~~g~-~yvtd~~~--------~~~~~i~v~d~---~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 114 PI-TLS------NSFVNDLAVDLIHNF-VYISDPAP--------DDKAALIRVDL---QTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp TT-SCT------TCCCCEEEEETTTTE-EEEEECCS--------GGGCEEEEEET---TTCCEEEECTTCTTTSCCSCCC
T ss_pred hh-ccc------ccccceEEEecCCCE-EEEEcCcc--------CCCCeEEEEEC---CCCCEEEEecCCCcccccccce
Confidence 10 000 123467889987654 44433210 02346777774 33333222100
Q ss_pred -------------------ccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 455 -------------------DLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 455 -------------------~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
.....+++|||||+.|++..... .+||.++.
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~---~~l~~~~~ 224 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS---TSMYRIKS 224 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC---SEEEEEEH
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC---CeEEEEEH
Confidence 01235689999999998876543 47999875
No 480
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.94 E-value=0.0017 Score=76.29 Aligned_cols=189 Identities=12% Similarity=0.047 Sum_probs=123.3
Q ss_pred CeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCc
Q 002194 201 KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPK 280 (954)
Q Consensus 201 ~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~ 280 (954)
..|+|+. ...|..+++++.....+...... . ....++|.+++..||++-.
T Consensus 7 ~~Ll~s~----------~~~I~~i~l~~~~~~~~~~~~~~--~-~~~~l~~d~~~~~lywtD~----------------- 56 (628)
T 4a0p_A 7 AFLLFSR----------RADIRRISLETNNNNVAIPLTGV--K-EASALDFDVTDNRIYWTDI----------------- 56 (628)
T ss_dssp CEEEEEE----------TTEEEEEESSCTTCEEECCCCSC--S-CEEEEEEETTTTEEEEEET-----------------
T ss_pred cEEEEEe----------CCcEEEEECCCCCcceEEEcCCC--C-ceEEEEEECCCCEEEEEEC-----------------
Confidence 4688865 56899999988654433332221 0 0447889998888887710
Q ss_pred eeeccCCceeeechhhhhccCccccccccccccceEEEEEeCC-ceeEcC-CC-ccccccccCCCCcEEEEEeecCCccc
Q 002194 281 MQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSF 357 (954)
Q Consensus 281 ~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G-~~~~l~-~~-~~~~~~~~SpDGk~l~~~s~~~~~~~ 357 (954)
....|++++++| ..+.+. .+ ....++++.+.++.|+++...
T Consensus 57 -------------------------------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~----- 100 (628)
T 4a0p_A 57 -------------------------------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG----- 100 (628)
T ss_dssp -------------------------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT-----
T ss_pred -------------------------------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC-----
Confidence 234588888854 333333 33 445677788788888776532
Q ss_pred ccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEE
Q 002194 358 IVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYT 437 (954)
Q Consensus 358 ~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~ 437 (954)
...|++.+++|+..+.+..... ..++.++..|... .+||++.. ....|++
T Consensus 101 -------~~~I~v~~~dG~~~~~l~~~~l------------~~P~~iavdp~~G-~lY~tD~g----------~~~~I~r 150 (628)
T 4a0p_A 101 -------TNRIEVSKLDGQHRQVLVWKDL------------DSPRALALDPAEG-FMYWTEWG----------GKPKIDR 150 (628)
T ss_dssp -------TTEEEEEETTSTTCEEEECSSC------------CCEEEEEEETTTT-EEEEEECS----------SSCEEEE
T ss_pred -------CCEEEEEecCCCcEEEEEeCCC------------CCcccEEEccCCC-eEEEeCCC----------CCCEEEE
Confidence 2378999999876555543111 2346788988555 45664321 2458999
Q ss_pred EecCCCCCCCceEEeecccccCceeeccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 438 QQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 438 ~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
+++ +|...+.+...-....+++++++++.|+++.... ..|+.+++++.
T Consensus 151 ~~~---dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~---~~I~~~d~dG~ 198 (628)
T 4a0p_A 151 AAM---DGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDT---NLIESSNMLGL 198 (628)
T ss_dssp EET---TSCSCEEEECSCSSEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EeC---CCCceEEEECCCCCcceEEEccccCEEEEEECCC---CEEEEEcCCCC
Confidence 986 7777777655444567799999999998875433 57999999885
No 481
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.91 E-value=0.0053 Score=64.52 Aligned_cols=193 Identities=16% Similarity=0.093 Sum_probs=105.8
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCC
Q 002194 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (954)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (954)
....+.+++||+ |+++. .+...|++++.+ ++...+...... ..+..+.+.+||++.+.. .
T Consensus 21 ~p~~i~~d~~g~-l~v~~--------~~~~~v~~~~~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 80 (300)
T 2qc5_A 21 GPYGITSSEDGK-VWFTQ--------HKANKISSLDQS-GRIKEFEVPTPD---AKVMCLIVSSLGDIWFTE-N------ 80 (300)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECTTSCEEEEE-T------
T ss_pred CcceeeECCCCC-EEEEc--------CCCCeEEEECCC-CceEEEECCCCC---CcceeEEECCCCCEEEEe-c------
Confidence 456678899987 44432 124688999987 665543221110 114577788999744432 0
Q ss_pred CCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCceeEcCC--C-ccccccccCCCCcEE
Q 002194 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (954)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~~~l~~--~-~~~~~~~~SpDGk~l 346 (954)
....|++++.+|+.+.+.. . .....+++++||+..
T Consensus 81 ------------------------------------------~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 118 (300)
T 2qc5_A 81 ------------------------------------------GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIW 118 (300)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred ------------------------------------------CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEE
Confidence 1234667776554443322 2 445677888998744
Q ss_pred EEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002194 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (954)
Q Consensus 347 ~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (954)
+... . ...++.++.++ +...+.. +.. ...+..+++.+||+ + |+..
T Consensus 119 v~~~-~------------~~~i~~~~~~g-~~~~~~~-~~~----------~~~~~~i~~d~~g~-l-~v~~-------- 163 (300)
T 2qc5_A 119 FTQL-N------------GDRIGKLTADG-TIYEYDL-PNK----------GSYPAFITLGSDNA-L-WFTE-------- 163 (300)
T ss_dssp EEET-T------------TTEEEEECTTS-CEEEEEC-SST----------TCCEEEEEECTTSS-E-EEEE--------
T ss_pred EEcc-C------------CCeEEEECCCC-CEEEccC-CCC----------CCCceeEEECCCCC-E-EEEe--------
Confidence 3322 1 12688888874 3333221 100 02345688999997 3 3322
Q ss_pred ccccCCCeEEEEecCCCCCCCceEEee--cccccCceeeccCCceEEEEEeccccceEEEEEcCCC
Q 002194 427 VEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (954)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (954)
...+.|++++. + ++...+.. .......++++++|+ |+++.... ..|++++.++
T Consensus 164 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~---~~i~~~~~~g 218 (300)
T 2qc5_A 164 ---NQNNSIGRITN---T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMG---NKIGRITTTG 218 (300)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT---TEEEEECTTC
T ss_pred ---cCCCeEEEECC---C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEccCC---CEEEEEcCCC
Confidence 12346888873 3 34333321 122345688889885 55443322 4689998843
No 482
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=0.0018 Score=72.47 Aligned_cols=136 Identities=7% Similarity=0.040 Sum_probs=79.4
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce--eecccCCCcc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPLFQSPDIY 241 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~--~~lt~~~~~~ 241 (954)
.|+.+++.. +..+.+.. .......++|++||++|+++... .+.....++.++.+++-. +.+.....
T Consensus 160 ~I~~id~~~----~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~----~~~~~~~v~~~~~~g~~~~~~~l~~~~~-- 227 (430)
T 3tc9_A 160 PTRLIDFEK----EYVSTVYS--GLSKVRTICWTHEADSMIITNDQ----NNNDRPNNYILTRESGFKVITELTKGQN-- 227 (430)
T ss_dssp EEEEEETTT----TEEEEEEC--CCSCEEEEEECTTSSEEEEEECC----SCTTSEEEEEEEGGGTSCSEEEEEECSS--
T ss_pred cEEEEECCC----CEEEEEec--CCCCcceEEEeCCCCEEEEEeCC----CCcccceEEEEeCCCceeeeeeeccCCC--
Confidence 567777632 33334422 22357788999999988776531 122344677777665432 22222111
Q ss_pred ccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe
Q 002194 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (954)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~ 321 (954)
...++++|++..|+++.. ...+|++++.
T Consensus 228 ----p~giavdp~~g~lyv~d~------------------------------------------------~~~~V~~~~~ 255 (430)
T 3tc9_A 228 ----CNGAETHPINGELYFNSW------------------------------------------------NAGQVFRYDF 255 (430)
T ss_dssp ----CCCEEECTTTCCEEEEET------------------------------------------------TTTEEEEEET
T ss_pred ----ceEEEEeCCCCEEEEEEC------------------------------------------------CCCEEEEEEC
Confidence 347888994445665500 2346889998
Q ss_pred -CCceeEcC-CC--ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccC
Q 002194 322 -DGTVKEIG-PP--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG 375 (954)
Q Consensus 322 -~G~~~~l~-~~--~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g 375 (954)
++....+. .. .....++|+|||++|++..... ..|+.++.++
T Consensus 256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~------------~~I~~~~~d~ 301 (430)
T 3tc9_A 256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ------------HYILRSDYDW 301 (430)
T ss_dssp TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT------------TEEEEEEEET
T ss_pred CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC------------CEEEEEeCCc
Confidence 55442332 21 3456789999999887775332 3788887774
No 483
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.78 E-value=2.7e-05 Score=82.35 Aligned_cols=69 Identities=19% Similarity=0.149 Sum_probs=44.2
Q ss_pred cEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC---CCccc---E
Q 002194 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFC---C 786 (954)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~---p~~~~---a 786 (954)
+.|+..+.. +. ..........+|+.+.++.+ ....++.++||||||.+|..++.+. |+.+. .
T Consensus 49 ~~v~~~d~~---~~----~~~~~~~~~a~~~~~~i~~~-----~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~ 116 (283)
T 3tjm_A 49 IPTYGLQCT---RA----APLDSIHSLAAYYIDCIRQV-----QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 116 (283)
T ss_dssp SCEEEECCC---TT----SCCSCHHHHHHHHHHHHTTT-----CCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCE
T ss_pred ceEEEEecC---CC----CCCCCHHHHHHHHHHHHHHh-----CCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccce
Confidence 888885542 21 11122344455554444322 1125899999999999999998865 67788 8
Q ss_pred EEEeccC
Q 002194 787 GIARSGA 793 (954)
Q Consensus 787 ~v~~~~~ 793 (954)
+|++++.
T Consensus 117 lvlid~~ 123 (283)
T 3tjm_A 117 LFLFDGS 123 (283)
T ss_dssp EEEESCC
T ss_pred EEEEcCC
Confidence 8888753
No 484
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.77 E-value=0.0078 Score=70.69 Aligned_cols=223 Identities=11% Similarity=0.037 Sum_probs=136.5
Q ss_pred ccceEEEEEeC-CceeE-cCC-C-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCc
Q 002194 312 ATTQLVLVSLD-GTVKE-IGP-P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLA 387 (954)
Q Consensus 312 ~~~~l~~~~~~-G~~~~-l~~-~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~ 387 (954)
....|..++++ ..... +.- . .....++|++++..|+++... .+.|+.++++|+..+.+.....
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~------------~~~I~r~~~~g~~~~~v~~~g~- 79 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS------------LKTISRAFMNGSALEHVVEFGL- 79 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC-
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC------------CCeEEEEECCCCCcEEEEeCCC-
Confidence 34568899993 33222 221 2 456678999988888887633 2378888888876555443211
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEe-ecccccCceeeccC
Q 002194 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDD 466 (954)
Q Consensus 388 ~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~spD 466 (954)
..+..+++.+.++.| ||++. ..+.|.+.++ +|...+.+. ..-....++++.|.
T Consensus 80 -----------~~P~GlAvD~~~~~L-Y~tD~-----------~~~~I~v~~~---dG~~~~~l~~~~l~~P~~iavdp~ 133 (628)
T 4a0p_A 80 -----------DYPEGMAVDWLGKNL-YWADT-----------GTNRIEVSKL---DGQHRQVLVWKDLDSPRALALDPA 133 (628)
T ss_dssp -----------SCCCEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSTTCEEEECSSCCCEEEEEEETT
T ss_pred -----------CCcceEEEEeCCCEE-EEEEC-----------CCCEEEEEec---CCCcEEEEEeCCCCCcccEEEccC
Confidence 123467777666654 55332 2458899986 666666664 33334567899998
Q ss_pred CceEEEEEeccccceEEEEEcCCCCCCCcEEEecCCCCCccCCCCCCCeeeccCCcEEEEEEeeccCCCcEEEEecCCCC
Q 002194 467 SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (954)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (954)
...|+++.+.. ..+|+++++++. ....+.+ ......+ ++++++++.|++...
T Consensus 134 ~G~lY~tD~g~--~~~I~r~~~dG~--~~~~l~~-~~~~P~G------lalD~~~~~LY~aD~----------------- 185 (628)
T 4a0p_A 134 EGFMYWTEWGG--KPKIDRAAMDGS--ERTTLVP-NVGRANG------LTIDYAKRRLYWTDL----------------- 185 (628)
T ss_dssp TTEEEEEECSS--SCEEEEEETTSC--SCEEEEC-SCSSEEE------EEEETTTTEEEEEET-----------------
T ss_pred CCeEEEeCCCC--CCEEEEEeCCCC--ceEEEEC-CCCCcce------EEEccccCEEEEEEC-----------------
Confidence 88888886543 368999999985 4444443 1221122 778888888888762
Q ss_pred CCCCCCeEEEEECCCCCeEEEeccCcccccceeEEeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCce
Q 002194 547 PEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (954)
Q Consensus 547 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~l~~~~~~~g~~ 621 (954)
....|+.+|++++..+.+...-.. ...+..+++.++++-+ ....|++++..+|+.
T Consensus 186 ---~~~~I~~~d~dG~~~~v~~~~l~~--------------P~glav~~~~ly~tD~---~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 186 ---DTNLIESSNMLGLNREVIADDLPH--------------PFGLTQYQDYIYWTDW---SRRSIERANKTSGQN 240 (628)
T ss_dssp ---TTTEEEEEETTSCSCEEEEECCSC--------------EEEEEEETTEEEEEET---TTTEEEEEETTTCCS
T ss_pred ---CCCEEEEEcCCCCceEEeeccCCC--------------ceEEEEECCEEEEecC---CCCEEEEEECCCCCc
Confidence 123599999987766433221111 1123445567766543 345788888666643
No 485
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.73 E-value=0.002 Score=68.62 Aligned_cols=93 Identities=8% Similarity=0.058 Sum_probs=53.9
Q ss_pred CCCCcEEEEEeecCCcccccccCCCCcceEEEeccC-ceE---EEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002194 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (954)
Q Consensus 340 SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g-~~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~ 415 (954)
+|||++|+++... ...|+++++++ +.. +.+... .....+++++||+ + |
T Consensus 175 s~dg~~lyv~d~~------------~~~I~~~~~~~~g~~~~~~~~~~~--------------~~P~gi~vd~dG~-l-~ 226 (306)
T 2p4o_A 175 KRFGNFLYVSNTE------------KMLLLRIPVDSTDKPGEPEIFVEQ--------------TNIDDFAFDVEGN-L-Y 226 (306)
T ss_dssp EEETTEEEEEETT------------TTEEEEEEBCTTSCBCCCEEEEES--------------CCCSSEEEBTTCC-E-E
T ss_pred CcCCCEEEEEeCC------------CCEEEEEEeCCCCCCCccEEEecc--------------CCCCCeEECCCCC-E-E
Confidence 8999988877633 23788888874 221 111110 2345789999995 3 4
Q ss_pred EEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec---ccccCceeec---cCCceEEEEEe
Q 002194 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL---DLRYGGISWC---DDSLALVYESW 475 (954)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~---~~~~~~~~~s---pDg~~l~~~~~ 475 (954)
..+. ..+.|.+++. + ++...+... -.....++|+ ||++.|+....
T Consensus 227 va~~-----------~~~~V~~~~~---~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 227 GATH-----------IYNSVVRIAP---D-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EECB-----------TTCCEEEECT---T-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEeC-----------CCCeEEEECC---C-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 3221 2456888873 3 343333211 1234567888 88888877654
No 486
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.66 E-value=0.0038 Score=63.77 Aligned_cols=211 Identities=14% Similarity=0.163 Sum_probs=113.0
Q ss_pred eeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEE
Q 002194 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (954)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (954)
++|.+.. ...+..+|.||+++|+.+.+ +...|+.+|+++...+.+.-..... .+.+++.++|.+++
T Consensus 20 ~~l~g~~--~~lSGla~~~~~~~L~aV~d--------~~~~I~~ld~~g~v~~~i~l~g~~D----~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 20 KEIAGIT--NNISSLTWSAQSNTLFSTIN--------KPAAIVEMTTNGDLIRTIPLDFVKD----LETIEYIGDNQFVI 85 (255)
T ss_dssp EECTTCC--SCEEEEEEETTTTEEEEEEE--------TTEEEEEEETTCCEEEEEECSSCSS----EEEEEECSTTEEEE
T ss_pred eECCCcc--cCcceeEEeCCCCEEEEEEC--------CCCeEEEEeCCCCEEEEEecCCCCC----hHHeEEeCCCEEEE
Confidence 4554433 25888999999988877654 3678999999854444442221111 56888999997444
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe--CCce---eEc------
Q 002194 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTV---KEI------ 328 (954)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~--~G~~---~~l------ 328 (954)
.. + +...|+++++ ++.. ..+
T Consensus 86 s~-----------------------E--------------------------~~~~l~~~~v~~~~~i~~~~~~~~~~~~ 116 (255)
T 3qqz_A 86 SD-----------------------E--------------------------RDYAIYVISLTPNSEVKILKKIKIPLQE 116 (255)
T ss_dssp EE-----------------------T--------------------------TTTEEEEEEECTTCCEEEEEEEECCCSS
T ss_pred EE-----------------------C--------------------------CCCcEEEEEcCCCCeeeeeeeecccccc
Confidence 22 0 1123444444 2211 111
Q ss_pred CC-CccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEe--ccCceEEEeccCCCcccCCccccccccCcccee
Q 002194 329 GP-PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWT--TDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (954)
Q Consensus 329 ~~-~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d--~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~ 405 (954)
.. .....+++|+|++++|+....+.+ ..++.++ ..+...+.+......... ......+++
T Consensus 117 ~~~N~g~EGLA~d~~~~~L~va~E~~p-----------~~i~~~~g~~~~~~l~i~~~~~~~~~~------~~~d~S~l~ 179 (255)
T 3qqz_A 117 SPTNCGFEGLAYSRQDHTFWFFKEKNP-----------IEVYKVNGLLSSNELHISKDKALQRQF------TLDDVSGAE 179 (255)
T ss_dssp CCCSSCCEEEEEETTTTEEEEEEESSS-----------EEEEEEESTTCSSCCEEEECHHHHHTC------CSSCCCEEE
T ss_pred ccccCCcceEEEeCCCCEEEEEECcCC-----------ceEEEEcccccCCceeeecchhhcccc------ccCCceeEE
Confidence 11 255688999999999888775542 2455554 111111111100000000 012345788
Q ss_pred eccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeecc---------cccCceeeccCCceEEEEEec
Q 002194 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---------LRYGGISWCDDSLALVYESWY 476 (954)
Q Consensus 406 wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~---------~~~~~~~~spDg~~l~~~~~~ 476 (954)
+.|....+++.. +....|..+|. +|.....+.-.. ....++++.++|+ |+.+ ++
T Consensus 180 ~dp~tg~lliLS------------~~s~~L~~~d~---~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE 242 (255)
T 3qqz_A 180 FNQQKNTLLVLS------------HESRALQEVTL---VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SE 242 (255)
T ss_dssp EETTTTEEEEEE------------TTTTEEEEECT---TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ET
T ss_pred EcCCCCeEEEEE------------CCCCeEEEEcC---CCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cC
Confidence 888776665552 23456777774 544222221111 2446799999996 5555 33
Q ss_pred cccceEEEEEcCCC
Q 002194 477 KTRRTRTWVISPGS 490 (954)
Q Consensus 477 ~~~~~~l~~~d~~~ 490 (954)
. ..+|++..+.
T Consensus 243 ~---n~~y~f~~~~ 253 (255)
T 3qqz_A 243 P---NRFYRFTPQS 253 (255)
T ss_dssp T---TEEEEEEC--
T ss_pred C---ceEEEEEecC
Confidence 3 2588876543
No 487
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.64 E-value=0.0079 Score=64.40 Aligned_cols=144 Identities=13% Similarity=0.036 Sum_probs=76.6
Q ss_pred EEEEEe-CCceeEcCCC------ccccccccCC-CCcEEEEEeecCCccc-----ccccCCCCcceEEEeccCceEEEec
Q 002194 316 LVLVSL-DGTVKEIGPP------AVYTSLDPSP-DEKYILISSIHRPYSF-----IVPCGRFPRQVGVWTTDGIFVRELC 382 (954)
Q Consensus 316 l~~~~~-~G~~~~l~~~------~~~~~~~~Sp-DGk~l~~~s~~~~~~~-----~~~~~~~~~~l~l~d~~g~~~~~l~ 382 (954)
|++++. +|..+.+... .....+++.| ||+ |+++........ ........+.++.++.++++.+.+.
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 566666 4544443221 2345678899 885 444432210000 0000011246888888776655432
Q ss_pred cCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCC---CCceEEeecccccC
Q 002194 383 DLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG---EGPEILHKLDLRYG 459 (954)
Q Consensus 383 ~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g---~~~~~l~~~~~~~~ 459 (954)
.. ......++|+|||+.+++. + ...+.|+++++ ++ +..+.+....+ ..
T Consensus 182 ~~-------------~~~p~gia~~~dg~~lyv~-d-----------~~~~~I~~~~~---~~~~~~~~~~~~~~~g-P~ 232 (322)
T 2fp8_A 182 KE-------------LHVPGGAEVSADSSFVLVA-E-----------FLSHQIVKYWL---EGPKKGTAEVLVKIPN-PG 232 (322)
T ss_dssp EE-------------ESCCCEEEECTTSSEEEEE-E-----------GGGTEEEEEES---SSTTTTCEEEEEECSS-EE
T ss_pred cC-------------CccCcceEECCCCCEEEEE-e-----------CCCCeEEEEEC---CCCcCCccceEEeCCC-CC
Confidence 21 0123568999999865554 2 12457888886 33 23333333333 56
Q ss_pred ceeeccCCceEEEEEecc-------ccceEEEEEcCCC
Q 002194 460 GISWCDDSLALVYESWYK-------TRRTRTWVISPGS 490 (954)
Q Consensus 460 ~~~~spDg~~l~~~~~~~-------~~~~~l~~~d~~~ 490 (954)
++++.+||+ |+.+.... .....|++++.++
T Consensus 233 gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 233 NIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG 269 (322)
T ss_dssp EEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS
T ss_pred CeEECCCCC-EEEEecCcccccccCCCccEEEEECCCC
Confidence 688999997 44444331 1136799998865
No 488
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.62 E-value=0.003 Score=67.69 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=45.9
Q ss_pred ceEEEEEe-CCceeEcCCC-ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCc---eEEEeccCCCcc
Q 002194 314 TQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI---FVRELCDLPLAE 388 (954)
Q Consensus 314 ~~l~~~~~-~G~~~~l~~~-~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~---~~~~l~~~~~~~ 388 (954)
..|++++. +++.+.+... .....++|+|||++|+++.... ..|+++++++. ..+.+...+
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~------------~~I~~~~~~~~~~~~~~~~~~~~--- 229 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLS------------HQIVKYWLEGPKKGTAEVLVKIP--- 229 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGG------------TEEEEEESSSTTTTCEEEEEECS---
T ss_pred ceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCC------------CeEEEEECCCCcCCccceEEeCC---
Confidence 56899998 6765554333 4455689999999888775332 27888888753 222222111
Q ss_pred cCCccccccccCccceeeccCCC
Q 002194 389 DIPIAFNSVRKGMRSINWRSDKP 411 (954)
Q Consensus 389 ~~p~~~~~~~~g~~~~~wspDg~ 411 (954)
++..+++.+||+
T Consensus 230 -----------gP~gi~~d~~G~ 241 (322)
T 2fp8_A 230 -----------NPGNIKRNADGH 241 (322)
T ss_dssp -----------SEEEEEECTTSC
T ss_pred -----------CCCCeEECCCCC
Confidence 134688999996
No 489
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.014 Score=65.37 Aligned_cols=158 Identities=8% Similarity=0.081 Sum_probs=93.8
Q ss_pred cccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCC
Q 002194 190 KLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (954)
Q Consensus 190 ~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (954)
....++|+| ++..|+++.. ...|++++++++..+.+...... ...++|++||+.|+++..... .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~---------~~~I~~id~~~~~v~~~~~~~~~-----P~~ia~d~~G~~lyvad~~~~-~ 202 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE---------QHPTRLIDFEKEYVSTVYSGLSK-----VRTICWTHEADSMIITNDQNN-N 202 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB---------TEEEEEEETTTTEEEEEECCCSC-----EEEEEECTTSSEEEEEECCSC-T
T ss_pred CCCEEEECCCCCCeEEEEeC---------CCcEEEEECCCCEEEEEecCCCC-----cceEEEeCCCCEEEEEeCCCC-c
Confidence 356678999 5667666532 17899999998877666542221 457899999998887711000 0
Q ss_pred CCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEeCCce---eEcCCCccccccccCCCCcE
Q 002194 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTV---KEIGPPAVYTSLDPSPDEKY 345 (954)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~~G~~---~~l~~~~~~~~~~~SpDGk~ 345 (954)
....++.++.+|.. +.+........++++|++.+
T Consensus 203 -------------------------------------------~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 203 -------------------------------------------DRPNNYILTRESGFKVITELTKGQNCNGAETHPINGE 239 (430)
T ss_dssp -------------------------------------------TSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCC
T ss_pred -------------------------------------------ccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCE
Confidence 01124444443322 22222234567789996556
Q ss_pred EEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002194 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (954)
Q Consensus 346 l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~ 425 (954)
|+++... ...|+.++.+++....+..... ....+.++|+|||+.+++. +
T Consensus 240 lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~-----------~~~P~gia~~pdG~~lyv~-d------- 288 (430)
T 3tc9_A 240 LYFNSWN------------AGQVFRYDFTTQETTPLFTIQD-----------SGWEFHIQFHPSGNYAYIV-V------- 288 (430)
T ss_dssp EEEEETT------------TTEEEEEETTTTEEEEEEECSS-----------SSCCEEEEECTTSSEEEEE-E-------
T ss_pred EEEEECC------------CCEEEEEECCCCcEEEEEEcCC-----------CCcceeEEEcCCCCEEEEE-E-------
Confidence 6666532 2378999998776644432211 0234679999999855443 2
Q ss_pred cccccCCCeEEEEec
Q 002194 426 KVEVTPRDIIYTQQA 440 (954)
Q Consensus 426 ~~~~~~~~~l~~~~~ 440 (954)
.....|++++.
T Consensus 289 ----~~~~~I~~~~~ 299 (430)
T 3tc9_A 289 ----VNQHYILRSDY 299 (430)
T ss_dssp ----TTTTEEEEEEE
T ss_pred ----CCCCEEEEEeC
Confidence 12457777775
No 490
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.53 E-value=0.019 Score=58.50 Aligned_cols=115 Identities=14% Similarity=0.187 Sum_probs=72.0
Q ss_pred ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC
Q 002194 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (954)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~ 411 (954)
..+++++|.||++.|+.+.+.. ..|+.+|.+++..+.+..... .....+++.++|.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~------------~~I~~ld~~g~v~~~i~l~g~------------~D~EGIa~~~~g~ 82 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKP------------AAIVEMTTNGDLIRTIPLDFV------------KDLETIEYIGDNQ 82 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETT------------EEEEEEETTCCEEEEEECSSC------------SSEEEEEECSTTE
T ss_pred cCcceeEEeCCCCEEEEEECCC------------CeEEEEeCCCCEEEEEecCCC------------CChHHeEEeCCCE
Confidence 5678899999999888877553 278889998766666543111 1234677887774
Q ss_pred CceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEee---------cccccCceeeccCCceEEEEEeccccceE
Q 002194 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK---------LDLRYGGISWCDDSLALVYESWYKTRRTR 482 (954)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~---------~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 482 (954)
++.++. ..+.++++++ ...+....+.. ......+++|+|++++|+.+..... ..
T Consensus 83 --~~vs~E-----------~~~~l~~~~v--~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p--~~ 145 (255)
T 3qqz_A 83 --FVISDE-----------RDYAIYVISL--TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP--IE 145 (255)
T ss_dssp --EEEEET-----------TTTEEEEEEE--CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS--EE
T ss_pred --EEEEEC-----------CCCcEEEEEc--CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC--ce
Confidence 222221 2346777775 12222221211 1223467999999999888776654 57
Q ss_pred EEEEc
Q 002194 483 TWVIS 487 (954)
Q Consensus 483 l~~~d 487 (954)
||.++
T Consensus 146 i~~~~ 150 (255)
T 3qqz_A 146 VYKVN 150 (255)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99988
No 491
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.49 E-value=0.0054 Score=62.28 Aligned_cols=132 Identities=11% Similarity=0.100 Sum_probs=76.3
Q ss_pred ccceEEEEEe-CCcee-EcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCce-EEEeccCCCcc
Q 002194 312 ATTQLVLVSL-DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE 388 (954)
Q Consensus 312 ~~~~l~~~~~-~G~~~-~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~-~~~l~~~~~~~ 388 (954)
+.+.|..+|+ +|++. .+..+..+..-.++++|+.|+...-. .+.++++|.++.+ .+++....
T Consensus 63 g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------------~~~v~v~D~~t~~~~~ti~~~~--- 127 (262)
T 3nol_A 63 GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------------NGLGFVWNIRNLRQVRSFNYDG--- 127 (262)
T ss_dssp TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTCCEEEEEECSS---
T ss_pred CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee------------CCEEEEEECccCcEEEEEECCC---
Confidence 3467889999 88643 33323333333355678887666522 2389999998644 44444311
Q ss_pred cCCccccccccCccceeeccCCCCceEEEEeccCCCccccccCCCeEEEEecCCCCCCCceEEeec--ccccC---ceee
Q 002194 389 DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYG---GISW 463 (954)
Q Consensus 389 ~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~~---~~~~ 463 (954)
.....++||+.++.. ++.+.|+.+|. .+......+.-. ...+. .+.|
T Consensus 128 -------------eG~glt~dg~~L~~S-------------dGs~~i~~iDp--~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 128 -------------EGWGLTHNDQYLIMS-------------DGTPVLRFLDP--ESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp -------------CCCCEEECSSCEEEC-------------CSSSEEEEECT--TTCSEEEEEECEETTEECCCEEEEEE
T ss_pred -------------CceEEecCCCEEEEE-------------CCCCeEEEEcC--CCCeEEEEEEeccCCccccccceeEE
Confidence 224467888765544 33568999984 333333444321 22222 3567
Q ss_pred ccCCceEEEEEeccccceEEEEEcCCCC
Q 002194 464 CDDSLALVYESWYKTRRTRTWVISPGSK 491 (954)
Q Consensus 464 spDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (954)
. || .|+...+.. ..|.+||+.++
T Consensus 180 ~-~G-~lyan~w~~---~~I~vIDp~tG 202 (262)
T 3nol_A 180 V-DG-EIFANVWQT---NKIVRIDPETG 202 (262)
T ss_dssp E-TT-EEEEEETTS---SEEEEECTTTC
T ss_pred E-CC-EEEEEEccC---CeEEEEECCCC
Confidence 6 66 466555444 47999999997
No 492
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.38 E-value=0.0006 Score=75.48 Aligned_cols=36 Identities=14% Similarity=0.036 Sum_probs=31.8
Q ss_pred CcEEEEeeChHHHHHHHHHHh--------------------------CCCcccEEEEeccCC
Q 002194 759 SKIAVGGHSYGAFMTANLLAH--------------------------APHLFCCGIARSGAY 794 (954)
Q Consensus 759 ~ri~l~G~S~GG~~a~~~a~~--------------------------~p~~~~a~v~~~~~~ 794 (954)
+++.|+||||||.++..++.. +|++++.+|++++..
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~ 212 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPH 212 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCC
Confidence 689999999999999998876 678999999998754
No 493
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.33 E-value=0.0014 Score=71.47 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=30.9
Q ss_pred CCcEEEEeeChHHHHHHHHHHh-------------------CC------CcccEEEEeccCC
Q 002194 758 PSKIAVGGHSYGAFMTANLLAH-------------------AP------HLFCCGIARSGAY 794 (954)
Q Consensus 758 ~~ri~l~G~S~GG~~a~~~a~~-------------------~p------~~~~a~v~~~~~~ 794 (954)
.+++.|+||||||.++..++.+ +| ++++.+|++++..
T Consensus 103 ~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 103 GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPH 164 (387)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCC
Confidence 4689999999999999999872 35 6899999998754
No 494
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.28 E-value=0.0073 Score=61.30 Aligned_cols=195 Identities=11% Similarity=0.122 Sum_probs=109.5
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeEecCCeEEEEEecCCCCCCC
Q 002194 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (954)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (954)
.....|+ || +|+.+.. ..+...|.++|+++|+..+-...+... ..-..+++|+.|+.+.-
T Consensus 45 tqGL~~~-~~-~LyestG------~~g~S~v~~vD~~Tgkv~~~~~l~~~~-----FgeGit~~g~~ly~ltw------- 104 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTG------LNGRSSIRKVDIESGKTLQQIELGKRY-----FGEGISDWKDKIVGLTW------- 104 (262)
T ss_dssp EEEEEEE-TT-EEEEEEE------ETTEEEEEEECTTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEES-------
T ss_pred cceEEEE-CC-EEEEECC------CCCCceEEEEECCCCcEEEEEecCCcc-----ceeEEEEeCCEEEEEEe-------
Confidence 3557788 55 5555442 235679999999999876554444321 12234566778876610
Q ss_pred CCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe-CCc-eeEcCCCccccccccCCCCcEEEE
Q 002194 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPPAVYTSLDPSPDEKYILI 348 (954)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~-~G~-~~~l~~~~~~~~~~~SpDGk~l~~ 348 (954)
....++++|. +++ ..++.-+. ....+++||++|+.
T Consensus 105 -----------------------------------------~~~~v~v~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~ 141 (262)
T 3nol_A 105 -----------------------------------------KNGLGFVWNIRNLRQVRSFNYDG--EGWGLTHNDQYLIM 141 (262)
T ss_dssp -----------------------------------------SSSEEEEEETTTCCEEEEEECSS--CCCCEEECSSCEEE
T ss_pred -----------------------------------------eCCEEEEEECccCcEEEEEECCC--CceEEecCCCEEEE
Confidence 2346889998 764 34444322 44567789988766
Q ss_pred EeecCCcccccccCCCCcceEEEeccCc-eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccc
Q 002194 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (954)
Q Consensus 349 ~s~~~~~~~~~~~~~~~~~l~l~d~~g~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~wspDg~~i~~~~~~~~~~~~~~ 427 (954)
+. .. ..|+++|.++. ..+.+.... ...|. ...+.+.|. ||+ +|...
T Consensus 142 Sd-Gs------------~~i~~iDp~T~~v~~~I~V~~--~g~~~------~~lNELe~~-~G~--lyan~--------- 188 (262)
T 3nol_A 142 SD-GT------------PVLRFLDPESLTPVRTITVTA--HGEEL------PELNELEWV-DGE--IFANV--------- 188 (262)
T ss_dssp CC-SS------------SEEEEECTTTCSEEEEEECEE--TTEEC------CCEEEEEEE-TTE--EEEEE---------
T ss_pred EC-CC------------CeEEEEcCCCCeEEEEEEecc--CCccc------cccceeEEE-CCE--EEEEE---------
Confidence 54 22 27889998864 334443311 01111 112235676 674 34321
Q ss_pred cccCCCeEEEEecCCCCCCCceEEeec------------ccccCceeeccCCceEEEEEeccccceEEEEEcC
Q 002194 428 EVTPRDIIYTQQAEPVQGEGPEILHKL------------DLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (954)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~~~l~~~------------~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~d~ 488 (954)
-..+.|.++|. .+|.-...+.-. ....++++|+|+++.|+.+.. ....||.+.+
T Consensus 189 --w~~~~I~vIDp--~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK---~Wp~~~ev~~ 254 (262)
T 3nol_A 189 --WQTNKIVRIDP--ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK---LWPKVFEITL 254 (262)
T ss_dssp --TTSSEEEEECT--TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET---TCSEEEEEEE
T ss_pred --ccCCeEEEEEC--CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC---CCCceEEEEE
Confidence 12457888884 343333344221 112357999999998877642 2355666543
No 495
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.27 E-value=0.29 Score=58.00 Aligned_cols=27 Identities=19% Similarity=-0.037 Sum_probs=18.7
Q ss_pred CCCeEEEEEeeccccCCCCceEEEEEECCCCceeec
Q 002194 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL 234 (954)
Q Consensus 199 DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 234 (954)
++.+|++.. ....|+.+|+++|+..--
T Consensus 127 ~~~~v~v~~---------~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 127 WKGKVYVGA---------WDGRLIALDAATGKEVWH 153 (677)
T ss_dssp ETTEEEEEC---------TTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEc---------CCCEEEEEECCCCCEEee
Confidence 466676643 256899999988877543
No 496
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.26 E-value=0.013 Score=63.57 Aligned_cols=67 Identities=9% Similarity=-0.066 Sum_probs=37.6
Q ss_pred cccceeecCC---CCeEEEEEeeccccCCCCceEEEEEECCCCc---eeeccc-CC--CccccccccceeEecCCeEEEE
Q 002194 190 KLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDTGK---ARPLFQ-SP--DIYLNAIFDNFVWVNNSTLLVC 260 (954)
Q Consensus 190 ~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~---~~~lt~-~~--~~~~~~~~~~~~wspDG~~l~~ 260 (954)
....++|+|| +++|+++.... . ......|++++.+++. .+.+.. .+ ... ......++|.|||. |++
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~~~--~-~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~-~h~~~~l~~~pdG~-Lyv 150 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRTVA--E-GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHG-LHSGGRIAFGPDGM-LYV 150 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEC--T-TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTC-CCCCCCEEECTTSC-EEE
T ss_pred CceeEEECCCCCCCCEEEEEEecC--C-CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCC-CcCCceEEECCCCC-EEE
Confidence 4667899999 77776654311 0 0123689999887652 222211 22 110 01135889999994 666
Q ss_pred E
Q 002194 261 T 261 (954)
Q Consensus 261 ~ 261 (954)
+
T Consensus 151 ~ 151 (352)
T 2ism_A 151 T 151 (352)
T ss_dssp E
T ss_pred E
Confidence 5
No 497
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.19 E-value=0.013 Score=63.89 Aligned_cols=83 Identities=13% Similarity=0.067 Sum_probs=51.3
Q ss_pred cceEEEEEe-CCceeEcCCCccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEeccCceE---EEeccCCCcc
Q 002194 313 TTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV---RELCDLPLAE 388 (954)
Q Consensus 313 ~~~l~~~~~-~G~~~~l~~~~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~g~~~---~~l~~~~~~~ 388 (954)
.+.|+++++ ++....+. ..++.++|||+| +++...+ +++.+|+.++++. +.+...+.-.
T Consensus 145 dG~L~v~dl~~~~~~~~~--~~Vs~v~WSpkG--~~vg~~d-------------g~i~~~~~~~~~~~~k~~I~~Pp~~~ 207 (388)
T 1xip_A 145 VNDLSALDLRTKSTKQLA--QNVTSFDVTNSQ--LAVLLKD-------------RSFQSFAWRNGEMEKQFEFSLPSELE 207 (388)
T ss_dssp TSEEEEEETTTCCEEEEE--ESEEEEEECSSE--EEEEETT-------------SCEEEEEEETTEEEEEEEECCCHHHH
T ss_pred CCCEEEEEccCCcccccc--CCceEEEEcCCc--eEEEEcC-------------CcEEEEcCCCccccccceecCCcccc
Confidence 456889999 66554433 467899999999 4444422 3788999998774 3443322110
Q ss_pred cCCccccccccCccceeeccCCCCceEE
Q 002194 389 DIPIAFNSVRKGMRSINWRSDKPSTLYW 416 (954)
Q Consensus 389 ~~p~~~~~~~~g~~~~~wspDg~~i~~~ 416 (954)
+. .+....+.++.|.++++.++.+
T Consensus 208 ~~----~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 208 EL----PVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp TS----CTTTSEEEEEEESSSSEEEEEE
T ss_pred cc----cCCCeeEEEEEEecCCeEEEEE
Confidence 00 0011345679999999876655
No 498
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.07 E-value=0.11 Score=56.22 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=45.2
Q ss_pred cceeeccCCCCceEEEEeccCCCccc---cccCCCeEEEEecCCCCCC--------CceEEeecccccCceeeccCCceE
Q 002194 402 RSINWRSDKPSTLYWAETQDGGDAKV---EVTPRDIIYTQQAEPVQGE--------GPEILHKLDLRYGGISWCDDSLAL 470 (954)
Q Consensus 402 ~~~~wspDg~~i~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g~--------~~~~l~~~~~~~~~~~~spDg~~l 470 (954)
..++|.|||+ |++. . .+.+.... .....+.|++++. +|. ..+.+..+-.....++|+|+...|
T Consensus 138 ~~l~~~pDG~-Lyvt-~-G~~~~~~~~~d~~~~~G~I~ri~~---dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l 211 (354)
T 3a9g_A 138 GRIRFGPDGM-LYIT-T-GDAADPRLAQDLSSLAGKILRVDE---EGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVM 211 (354)
T ss_dssp CCEEECTTSC-EEEE-C-CCTTCGGGGTCTTCCSSEEEEECT---TSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCE
T ss_pred ceEEECCCCc-EEEE-E-CCCCCCccccCCCCCCeEEEEEcC---CCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCE
Confidence 5799999995 4443 1 12111111 1123467888885 443 234555555566789999955556
Q ss_pred EEEEeccccceEEEEEcC
Q 002194 471 VYESWYKTRRTRTWVISP 488 (954)
Q Consensus 471 ~~~~~~~~~~~~l~~~d~ 488 (954)
+++........+|.++..
T Consensus 212 ~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 212 VATEHGPVGHDEVNIILK 229 (354)
T ss_dssp EEEECCSSSCCEEEEECT
T ss_pred EEEecCCCCCcEEEEecC
Confidence 665443333345666654
No 499
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.07 E-value=0.085 Score=59.18 Aligned_cols=62 Identities=8% Similarity=0.170 Sum_probs=42.3
Q ss_pred ccceeecC-CCCeEEEEEeeccccCCCCceEEEEEECCCCceeecccCCCccccccccceeE-------ecCCeEEEEE
Q 002194 191 LNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW-------VNNSTLLVCT 261 (954)
Q Consensus 191 ~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w-------spDG~~l~~~ 261 (954)
....+++| |+..|+.+.+ ....|+++|++++....+.......+++ ...++| ++||+.|+++
T Consensus 141 p~~la~dp~~~~~Lyv~~~--------~~~~i~~ID~~~~~v~~l~~~~~~~~~~-p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYD--------GHKAIQLIDLKNRMLSSPLNINTIPTNR-IRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEEEEEEEEEE--------TEEEEEEEETTTTEEEEEECCTTSSCSB-EEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCCCEEEEEEC--------CCCeEEEEECCCCEEEEEEccCccccCC-CcEEEEeecccccCCCCCEEEEE
Confidence 44668899 5666666543 2467999999998887765543322111 457889 9999988877
No 500
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.01 E-value=0.04 Score=61.52 Aligned_cols=134 Identities=10% Similarity=0.007 Sum_probs=73.2
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceeecCCCCeEEEEEeeccccCCCCceEEEEEECCCCce--eecccCCCcc
Q 002194 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPLFQSPDIY 241 (954)
Q Consensus 164 ~l~l~~~~~~g~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~d~~~g~~--~~lt~~~~~~ 241 (954)
.|+.++..+ +....+.. .......++|+|||+ |+++... .......++.++.+++.. ..+.....
T Consensus 163 ~I~~id~~~----g~v~~~~~--~~~~P~giavd~dG~-lyVad~~----~~~~~~gv~~~~~~~~~~~~~~~~~~~~-- 229 (433)
T 4hw6_A 163 AFRHVDFVN----QYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQ----SSDTNTGIYLFTRASGFTERLSLCNARG-- 229 (433)
T ss_dssp CEEEEETTT----TEEEEECC--CCSCEEEEEECTTCC-EEEEECC----SCTTSEEEEEECGGGTTCCEEEEEECSS--
T ss_pred CEEEEECCC----CEEEEeec--CCCCccEEEECCCCC-EEEEcCC----CCcccceEEEEECCCCeeccccccccCC--
Confidence 567777632 44333321 223567789999999 6554321 112234466666554332 12211111
Q ss_pred ccccccceeEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeccCCceeeechhhhhccCccccccccccccceEEEEEe
Q 002194 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (954)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~l~~~~d~~~~~~~~~~~l~~~~~ 321 (954)
...+++.|++..|+++. ....+|++++.
T Consensus 230 ----P~giavd~~~G~lyv~d------------------------------------------------~~~~~V~~~d~ 257 (433)
T 4hw6_A 230 ----AKTCAVHPQNGKIYYTR------------------------------------------------YHHAMISSYDP 257 (433)
T ss_dssp ----BCCCEECTTTCCEEECB------------------------------------------------TTCSEEEEECT
T ss_pred ----CCEEEEeCCCCeEEEEE------------------------------------------------CCCCEEEEEEC
Confidence 34678888444566540 02345888888
Q ss_pred -CCce-eEcCC-C--ccccccccCCCCcEEEEEeecCCcccccccCCCCcceEEEecc
Q 002194 322 -DGTV-KEIGP-P--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (954)
Q Consensus 322 -~G~~-~~l~~-~--~~~~~~~~SpDGk~l~~~s~~~~~~~~~~~~~~~~~l~l~d~~ 374 (954)
+|.. +.+.. . .....++|+|||++|+++.... ..|+.++.+
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~------------~~I~~~~~d 303 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK------------HCIYRVDYN 303 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT------------TEEEEEEBC
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC------------CEEEEEeCC
Confidence 5765 33322 1 2223589999999888776332 267777766
Done!