Query 002201
Match_columns 954
No_of_seqs 626 out of 1702
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 16:41:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2daq_A WHSC1L1 protein, isofor 99.9 5.3E-23 1.8E-27 194.1 9.6 98 258-369 8-106 (110)
2 3qby_A Hepatoma-derived growth 99.8 1.3E-21 4.4E-26 179.8 9.0 84 255-355 2-85 (94)
3 2gfu_A DNA mismatch repair pro 99.8 2.1E-21 7.2E-26 189.4 10.0 107 257-374 21-128 (134)
4 4fu6_A PC4 and SFRS1-interacti 99.8 4E-21 1.4E-25 191.4 8.1 92 249-357 10-104 (153)
5 2l89_A PWWP domain-containing 99.8 2.2E-21 7.4E-26 182.6 5.3 88 257-355 4-93 (108)
6 3llr_A DNA (cytosine-5)-methyl 99.8 1.5E-20 5.3E-25 186.5 8.4 90 255-358 13-102 (154)
7 3pfs_A Bromodomain and PHD fin 99.8 3.4E-20 1.1E-24 183.4 8.7 95 258-360 36-150 (158)
8 1ri0_A Hepatoma-derived growth 99.8 6E-20 2E-24 173.3 8.9 85 254-355 15-99 (110)
9 1khc_A DNA cytosine-5 methyltr 99.8 4.9E-20 1.7E-24 182.2 8.1 88 257-358 10-97 (147)
10 1h3z_A Hypothetical 62.8 kDa p 99.8 8E-20 2.7E-24 172.2 7.2 90 256-356 4-97 (109)
11 3l42_A Peregrin; transcription 99.8 6.9E-19 2.4E-23 169.0 9.8 98 257-362 4-121 (130)
12 2lq6_A Bromodomain-containing 99.2 5.8E-12 2E-16 114.0 5.0 70 727-796 9-85 (87)
13 3lqh_A Histone-lysine N-methyl 99.1 1.3E-11 4.3E-16 126.2 3.0 62 451-512 1-67 (183)
14 2w5y_A Histone-lysine N-methyl 98.9 4.1E-10 1.4E-14 116.1 3.5 59 888-946 42-100 (192)
15 1we9_A PHD finger family prote 98.9 8.9E-10 3E-14 93.8 4.2 57 451-511 5-61 (64)
16 1wep_A PHF8; structural genomi 98.8 1.9E-09 6.5E-14 95.7 4.3 66 451-521 11-76 (79)
17 3v43_A Histone acetyltransfera 98.8 2.4E-09 8.1E-14 101.2 4.9 55 452-506 5-62 (112)
18 2ku3_A Bromodomain-containing 98.8 1E-09 3.5E-14 95.7 2.1 51 635-686 15-65 (71)
19 2kwj_A Zinc finger protein DPF 98.8 2.8E-09 9.5E-14 101.1 4.7 45 639-686 61-107 (114)
20 3ooi_A Histone-lysine N-methyl 98.8 6.2E-09 2.1E-13 110.2 6.9 53 894-946 88-140 (232)
21 1ml9_A Histone H3 methyltransf 98.7 8.3E-09 2.9E-13 113.2 6.1 50 895-944 130-179 (302)
22 2xb1_A Pygopus homolog 2, B-ce 98.7 3.4E-09 1.2E-13 99.1 1.9 58 453-512 4-65 (105)
23 3bo5_A Histone-lysine N-methyl 98.7 9.1E-09 3.1E-13 112.4 5.3 52 894-945 122-173 (290)
24 2l43_A N-teminal domain from h 98.7 3.6E-09 1.2E-13 95.9 1.6 51 635-686 24-74 (88)
25 1mvh_A Cryptic LOCI regulator 98.7 1E-08 3.5E-13 112.4 5.1 52 895-946 134-185 (299)
26 3f9x_A Histone-lysine N-methyl 98.7 1.6E-08 5.4E-13 101.1 5.8 51 896-946 28-78 (166)
27 3h6l_A Histone-lysine N-methyl 98.7 2.3E-08 7.8E-13 108.6 7.5 54 894-947 113-166 (278)
28 1h5p_A Nuclear autoantigen SP1 98.6 8.4E-09 2.9E-13 93.6 2.2 75 532-608 7-87 (95)
29 2vpb_A Hpygo1, pygopus homolog 98.6 4.9E-09 1.7E-13 89.9 0.3 52 453-506 9-64 (65)
30 2r3a_A Histone-lysine N-methyl 98.6 2.5E-08 8.6E-13 109.3 5.9 51 896-946 138-189 (300)
31 2ysm_A Myeloid/lymphoid or mix 98.6 5.8E-08 2E-12 91.3 7.3 45 639-686 57-103 (111)
32 1ufn_A Putative nuclear protei 98.6 1.4E-08 4.8E-13 92.1 2.3 72 535-607 14-91 (94)
33 2ysm_A Myeloid/lymphoid or mix 98.6 3.4E-08 1.2E-12 92.9 4.4 79 635-766 6-87 (111)
34 2f69_A Histone-lysine N-methyl 98.5 3E-08 1E-12 106.7 3.8 50 897-946 108-159 (261)
35 2kgg_A Histone demethylase jar 98.5 3.8E-08 1.3E-12 80.6 3.4 47 455-506 5-52 (52)
36 1n3j_A A612L, histone H3 lysin 98.5 2.4E-08 8.3E-13 94.8 2.2 45 896-940 2-46 (119)
37 1wee_A PHD finger family prote 98.5 4.2E-08 1.4E-12 85.5 3.4 54 452-511 16-69 (72)
38 2yt5_A Metal-response element- 98.5 3.4E-08 1.2E-12 84.5 2.6 51 635-686 5-60 (66)
39 1wem_A Death associated transc 98.5 1.5E-08 5.3E-13 89.1 0.4 56 452-511 16-73 (76)
40 3kqi_A GRC5, PHD finger protei 98.5 2.6E-08 9E-13 87.6 1.7 57 451-512 9-65 (75)
41 1oqj_A Glucocorticoid modulato 98.5 4E-08 1.4E-12 89.8 2.3 64 537-600 9-78 (97)
42 3ope_A Probable histone-lysine 98.5 1.2E-07 4.3E-12 99.5 6.4 48 897-944 73-120 (222)
43 1h3i_A Histone H3 lysine 4 spe 98.5 7.8E-08 2.7E-12 104.8 4.4 50 897-946 162-213 (293)
44 3hna_A Histone-lysine N-methyl 98.4 7.9E-08 2.7E-12 104.8 4.3 49 894-942 143-191 (287)
45 2k16_A Transcription initiatio 98.4 6.5E-08 2.2E-12 84.8 2.9 54 451-510 17-70 (75)
46 2kwj_A Zinc finger protein DPF 98.4 6E-08 2E-12 91.9 2.9 77 637-765 2-90 (114)
47 1wev_A Riken cDNA 1110020M19; 98.4 7.1E-08 2.4E-12 87.4 3.1 51 635-686 15-71 (88)
48 3o70_A PHD finger protein 13; 98.4 1.1E-07 3.9E-12 82.1 3.5 50 450-507 17-66 (68)
49 4gne_A Histone-lysine N-methyl 98.4 2.2E-07 7.5E-12 87.1 5.5 44 635-684 14-59 (107)
50 3v43_A Histone acetyltransfera 98.4 1.1E-07 3.9E-12 89.7 2.7 79 636-766 5-95 (112)
51 3o7a_A PHD finger protein 13 v 98.4 1.9E-07 6.4E-12 76.4 3.5 47 453-507 5-51 (52)
52 1mm2_A MI2-beta; PHD, zinc fin 98.3 1.8E-07 6E-12 79.1 3.1 50 631-686 4-55 (61)
53 2qpw_A PR domain zinc finger p 98.3 1.6E-07 5.4E-12 93.1 2.7 45 893-937 24-70 (149)
54 3c6w_A P28ING5, inhibitor of g 98.3 2.9E-07 9.9E-12 77.4 2.5 48 451-508 8-58 (59)
55 1wen_A Inhibitor of growth fam 98.2 7.6E-07 2.6E-11 77.6 4.8 49 451-509 15-66 (71)
56 1wew_A DNA-binding family prot 98.2 3.6E-07 1.2E-11 80.9 2.7 56 451-510 15-74 (78)
57 2g6q_A Inhibitor of growth pro 98.2 3.8E-07 1.3E-11 77.4 2.5 49 451-509 10-61 (62)
58 1weu_A Inhibitor of growth fam 98.2 6.8E-07 2.3E-11 81.4 4.1 50 451-510 35-87 (91)
59 1xwh_A Autoimmune regulator; P 98.2 5.3E-07 1.8E-11 77.3 2.7 46 635-686 7-54 (66)
60 4bbq_A Lysine-specific demethy 98.2 4.6E-07 1.6E-11 85.7 2.4 64 446-509 50-115 (117)
61 2puy_A PHD finger protein 21A; 98.2 6.5E-07 2.2E-11 75.3 2.5 46 635-686 4-51 (60)
62 1f62_A Transcription factor WS 98.1 6.1E-07 2.1E-11 72.9 2.1 46 638-686 2-49 (51)
63 2yql_A PHD finger protein 21A; 98.1 8.1E-07 2.8E-11 73.7 2.9 45 635-685 8-54 (56)
64 2ri7_A Nucleosome-remodeling f 98.1 3.9E-07 1.3E-11 91.9 0.9 55 451-510 7-61 (174)
65 2jmi_A Protein YNG1, ING1 homo 98.1 7.8E-07 2.7E-11 80.9 2.7 49 450-508 24-76 (90)
66 2rsd_A E3 SUMO-protein ligase 98.1 9.4E-07 3.2E-11 76.2 3.0 52 453-508 11-65 (68)
67 1fp0_A KAP-1 corepressor; PHD 98.1 1.3E-06 4.3E-11 79.1 3.9 47 634-686 23-71 (88)
68 2vnf_A ING 4, P29ING4, inhibit 98.1 7.9E-07 2.7E-11 74.9 2.3 48 451-508 9-59 (60)
69 2lri_C Autoimmune regulator; Z 98.1 1E-06 3.5E-11 75.7 2.5 46 635-686 11-58 (66)
70 2lv9_A Histone-lysine N-methyl 98.1 1E-06 3.6E-11 81.3 2.7 46 457-509 32-77 (98)
71 2l5u_A Chromodomain-helicase-D 98.0 1.6E-06 5.4E-11 73.3 2.6 46 635-686 10-57 (61)
72 2e6r_A Jumonji/ARID domain-con 98.0 1.9E-06 6.6E-11 78.7 2.0 49 635-686 15-65 (92)
73 1x4i_A Inhibitor of growth pro 97.9 2.3E-06 7.8E-11 74.3 1.6 49 451-509 5-56 (70)
74 3kv5_D JMJC domain-containing 97.9 2.6E-06 9E-11 99.0 1.7 62 452-518 37-98 (488)
75 2e6s_A E3 ubiquitin-protein li 97.9 8E-06 2.7E-10 72.2 3.9 48 636-686 26-76 (77)
76 3kv4_A PHD finger protein 8; e 97.8 2.3E-06 7.9E-11 98.3 -0.3 61 453-518 6-66 (447)
77 3pur_A Lysine-specific demethy 97.8 1.3E-05 4.6E-10 92.9 5.9 92 411-515 10-101 (528)
78 3o36_A Transcription intermedi 97.8 1E-05 3.5E-10 82.5 3.6 46 635-686 3-50 (184)
79 3asl_A E3 ubiquitin-protein li 97.8 9.5E-06 3.2E-10 70.4 2.6 46 638-686 20-68 (70)
80 3ep0_A PR domain zinc finger p 97.7 1.9E-05 6.5E-10 79.8 4.7 45 895-939 24-70 (170)
81 3s8p_A Histone-lysine N-methyl 97.7 8.9E-06 3E-10 87.8 2.0 38 903-940 141-178 (273)
82 3u5n_A E3 ubiquitin-protein li 97.7 1.3E-05 4.6E-10 83.1 3.3 47 634-686 5-53 (207)
83 3shb_A E3 ubiquitin-protein li 97.7 1.5E-05 5E-10 70.5 2.6 46 638-686 28-76 (77)
84 1f62_A Transcription factor WS 97.6 3.1E-05 1.1E-09 62.7 3.6 49 454-508 2-50 (51)
85 2ro1_A Transcription intermedi 97.6 1.5E-05 5.1E-10 81.8 1.9 45 636-686 2-48 (189)
86 2l5u_A Chromodomain-helicase-D 97.4 9.8E-05 3.4E-09 62.3 3.8 48 452-508 11-58 (61)
87 2k16_A Transcription initiatio 97.3 4.3E-05 1.5E-09 66.8 1.1 49 636-686 18-67 (75)
88 2yql_A PHD finger protein 21A; 97.3 0.00012 4.2E-09 60.5 3.6 47 452-507 9-55 (56)
89 2lv9_A Histone-lysine N-methyl 97.3 0.00013 4.3E-09 67.3 4.0 47 637-686 29-75 (98)
90 3c6w_A P28ING5, inhibitor of g 97.3 6.4E-05 2.2E-09 63.1 1.5 45 638-686 10-57 (59)
91 2vnf_A ING 4, P29ING4, inhibit 97.3 6.6E-05 2.2E-09 63.2 1.5 45 638-686 11-58 (60)
92 1xwh_A Autoimmune regulator; P 97.3 0.00015 5.1E-09 62.0 3.7 50 451-509 7-56 (66)
93 2e6s_A E3 ubiquitin-protein li 97.3 0.00032 1.1E-08 61.9 5.7 64 438-507 9-76 (77)
94 3ask_A E3 ubiquitin-protein li 97.3 0.00012 4.1E-09 76.8 3.5 48 636-686 174-224 (226)
95 2ku3_A Bromodomain-containing 97.3 9.2E-05 3.1E-09 64.4 2.1 53 451-509 15-67 (71)
96 2puy_A PHD finger protein 21A; 97.2 0.00014 4.7E-09 61.0 3.0 49 452-509 5-53 (60)
97 2jmi_A Protein YNG1, ING1 homo 97.2 9.8E-05 3.3E-09 67.1 2.2 46 636-686 26-75 (90)
98 3dal_A PR domain zinc finger p 97.2 7.9E-05 2.7E-09 76.9 1.7 49 891-939 51-101 (196)
99 1mm2_A MI2-beta; PHD, zinc fin 97.2 0.00023 8E-09 60.0 4.1 49 452-509 9-57 (61)
100 2lri_C Autoimmune regulator; Z 97.2 0.00022 7.6E-09 61.2 3.9 47 454-509 14-60 (66)
101 1wen_A Inhibitor of growth fam 97.2 0.00019 6.6E-09 62.4 3.6 46 636-686 16-64 (71)
102 2yt5_A Metal-response element- 97.2 0.00016 5.4E-09 61.6 2.6 57 452-509 6-62 (66)
103 2e6r_A Jumonji/ARID domain-con 97.0 0.00023 7.8E-09 64.9 2.3 50 453-508 17-66 (92)
104 3asl_A E3 ubiquitin-protein li 97.0 0.00058 2E-08 59.2 4.7 48 455-508 21-69 (70)
105 2g6q_A Inhibitor of growth pro 97.0 0.00019 6.4E-09 60.8 1.5 45 637-686 12-59 (62)
106 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.0 0.0002 6.7E-09 68.2 1.9 42 469-510 1-46 (140)
107 2lbm_A Transcriptional regulat 96.9 0.00021 7.2E-09 70.1 1.3 46 635-686 62-116 (142)
108 3rq4_A Histone-lysine N-methyl 96.9 0.00015 5E-09 77.4 0.2 35 905-939 115-149 (247)
109 1weu_A Inhibitor of growth fam 96.9 0.00039 1.3E-08 63.3 2.9 46 636-686 36-84 (91)
110 3db5_A PR domain zinc finger p 96.9 0.0005 1.7E-08 68.1 3.7 48 894-941 19-67 (151)
111 2l43_A N-teminal domain from h 96.8 0.00024 8.2E-09 64.3 0.6 53 451-509 24-76 (88)
112 3o36_A Transcription intermedi 96.8 0.00092 3.2E-08 67.9 4.9 51 452-511 4-54 (184)
113 4gne_A Histone-lysine N-methyl 96.7 0.001 3.4E-08 62.3 4.1 45 451-506 14-60 (107)
114 3o70_A PHD finger protein 13; 96.7 0.00082 2.8E-08 57.9 3.2 48 635-685 18-65 (68)
115 3u5n_A E3 ubiquitin-protein li 96.7 0.0014 4.9E-08 67.8 5.4 52 452-512 7-58 (207)
116 2lbm_A Transcriptional regulat 96.6 0.001 3.5E-08 65.3 3.8 89 413-509 14-118 (142)
117 3ql9_A Transcriptional regulat 96.6 0.00043 1.5E-08 66.8 0.8 47 634-686 55-110 (129)
118 1x4i_A Inhibitor of growth pro 96.5 0.00063 2.2E-08 59.0 1.1 45 638-686 7-54 (70)
119 1we9_A PHD finger family prote 96.4 0.0015 5.1E-08 55.2 3.1 51 635-686 5-57 (64)
120 1fp0_A KAP-1 corepressor; PHD 96.4 0.0043 1.5E-07 56.1 6.0 49 452-509 25-73 (88)
121 1wev_A Riken cDNA 1110020M19; 96.4 0.002 6.8E-08 58.2 3.8 59 451-510 15-74 (88)
122 3ql9_A Transcriptional regulat 96.4 0.0018 6.2E-08 62.5 3.6 89 413-509 8-112 (129)
123 3pmi_A PWWP domain-containing 96.3 0.0037 1.3E-07 59.4 5.3 89 256-362 2-91 (134)
124 3shb_A E3 ubiquitin-protein li 96.3 0.0026 8.8E-08 56.2 4.0 54 440-507 22-76 (77)
125 3ask_A E3 ubiquitin-protein li 96.1 0.0037 1.3E-07 65.6 4.6 55 440-508 170-225 (226)
126 3ray_A PR domain-containing pr 96.0 0.0026 9E-08 67.2 3.0 45 894-938 68-113 (237)
127 2xb1_A Pygopus homolog 2, B-ce 96.0 0.0028 9.6E-08 59.1 2.7 48 637-686 4-60 (105)
128 3o7a_A PHD finger protein 13 v 95.9 0.0037 1.3E-07 50.8 2.8 46 638-685 5-50 (52)
129 2ro1_A Transcription intermedi 95.9 0.0045 1.6E-07 63.4 4.1 50 452-510 2-51 (189)
130 2vpb_A Hpygo1, pygopus homolog 95.8 0.002 6.7E-08 55.1 0.7 49 635-685 7-64 (65)
131 3rsn_A SET1/ASH2 histone methy 95.7 0.0061 2.1E-07 61.7 3.9 53 454-509 7-60 (177)
132 1wep_A PHF8; structural genomi 95.7 0.0036 1.2E-07 55.3 1.9 49 636-686 12-62 (79)
133 1wew_A DNA-binding family prot 95.6 0.0038 1.3E-07 55.0 1.7 48 636-686 16-71 (78)
134 1wem_A Death associated transc 95.5 0.0029 9.8E-08 55.4 0.5 48 636-686 16-69 (76)
135 2kgg_A Histone demethylase jar 95.4 0.006 2.1E-07 49.6 2.1 47 638-685 4-52 (52)
136 1wee_A PHD finger family prote 95.3 0.0073 2.5E-07 52.3 2.6 49 636-686 16-65 (72)
137 2ri7_A Nucleosome-remodeling f 95.3 0.0026 9.1E-08 63.8 -0.4 50 635-686 7-58 (174)
138 3kqi_A GRC5, PHD finger protei 95.0 0.0049 1.7E-07 53.9 0.6 51 635-686 8-60 (75)
139 2rsd_A E3 SUMO-protein ligase 94.6 0.018 6.1E-07 49.4 2.9 46 638-686 12-64 (68)
140 3ihx_A PR domain zinc finger p 94.5 0.0083 2.8E-07 59.5 0.6 38 897-937 22-59 (152)
141 1wil_A KIAA1045 protein; ring 93.9 0.015 5.1E-07 51.7 1.0 56 634-692 13-81 (89)
142 3lqh_A Histone-lysine N-methyl 93.4 0.02 6.7E-07 58.5 1.0 54 637-690 3-66 (183)
143 3qii_A PHD finger protein 20; 92.9 0.16 5.4E-06 45.5 5.9 57 255-330 18-74 (85)
144 3p8d_A Medulloblastoma antigen 91.0 0.4 1.4E-05 41.1 6.0 57 255-330 3-59 (67)
145 1iym_A EL5; ring-H2 finger, ub 89.2 0.33 1.1E-05 38.6 4.0 50 451-509 4-53 (55)
146 2ecl_A Ring-box protein 2; RNF 87.8 0.29 1E-05 42.7 3.0 67 434-511 10-76 (81)
147 3pur_A Lysine-specific demethy 86.2 0.26 8.8E-06 57.5 2.2 37 650-686 55-93 (528)
148 3kv4_A PHD finger protein 8; e 84.8 0.13 4.5E-06 59.1 -1.1 50 636-686 4-55 (447)
149 3kv5_D JMJC domain-containing 84.7 0.16 5.6E-06 59.0 -0.4 49 637-686 37-87 (488)
150 2f5k_A MORF-related gene 15 is 83.5 1.7 5.9E-05 40.2 5.9 60 257-330 21-80 (102)
151 1v87_A Deltex protein 2; ring- 82.3 0.51 1.7E-05 43.4 2.0 57 453-511 26-94 (114)
152 2ect_A Ring finger protein 126 82.3 0.53 1.8E-05 40.2 2.0 51 451-511 14-64 (78)
153 2ecm_A Ring finger and CHY zin 82.0 0.47 1.6E-05 37.6 1.4 49 452-509 5-53 (55)
154 1wil_A KIAA1045 protein; ring 80.9 0.43 1.5E-05 42.5 0.9 35 736-770 16-51 (89)
155 2pv0_B DNA (cytosine-5)-methyl 80.8 0.94 3.2E-05 51.0 3.8 85 414-512 51-152 (386)
156 2l0b_A E3 ubiquitin-protein li 80.7 0.32 1.1E-05 43.4 -0.0 50 452-511 40-89 (91)
157 4a4f_A SurviVal of motor neuro 80.6 3.8 0.00013 34.4 6.6 57 258-330 8-64 (64)
158 2kiz_A E3 ubiquitin-protein li 78.9 0.66 2.3E-05 38.7 1.4 51 452-512 14-64 (69)
159 3s6w_A Tudor domain-containing 78.7 4.1 0.00014 32.9 6.0 53 258-326 1-53 (54)
160 1x4j_A Ring finger protein 38; 77.9 0.48 1.7E-05 40.3 0.2 51 451-511 22-72 (75)
161 3a1b_A DNA (cytosine-5)-methyl 76.2 1.3 4.5E-05 44.0 2.8 81 415-509 38-135 (159)
162 2ep4_A Ring finger protein 24; 74.5 0.65 2.2E-05 39.3 0.1 51 451-511 14-64 (74)
163 2equ_A PHD finger protein 20-l 73.5 5.7 0.0002 34.6 5.8 56 256-330 7-62 (74)
164 3rsn_A SET1/ASH2 histone methy 72.2 1.4 4.8E-05 44.6 1.9 65 642-709 10-81 (177)
165 4bbq_A Lysine-specific demethy 71.9 1 3.5E-05 42.0 0.7 36 651-686 73-113 (117)
166 2ct2_A Tripartite motif protei 71.3 1.1 3.7E-05 38.9 0.7 55 451-511 14-68 (88)
167 4hcz_A PHD finger protein 1; p 70.8 7.4 0.00025 32.3 5.5 53 257-327 2-54 (58)
168 2lcc_A AT-rich interactive dom 70.4 2.7 9.3E-05 36.8 3.1 61 257-329 4-66 (76)
169 2ea6_A Ring finger protein 4; 70.3 0.73 2.5E-05 38.0 -0.6 53 451-510 14-67 (69)
170 1g5v_A SurviVal motor neuron p 69.6 9.5 0.00032 34.3 6.5 58 257-330 9-66 (88)
171 2d9t_A Tudor domain-containing 69.6 9 0.00031 33.4 6.3 58 257-330 8-65 (78)
172 4ap4_A E3 ubiquitin ligase RNF 68.6 1.2 4.3E-05 41.3 0.6 67 438-511 33-125 (133)
173 1mhn_A SurviVal motor neuron p 67.9 7.8 0.00027 31.8 5.2 55 258-328 3-57 (59)
174 3ng2_A RNF4, snurf, ring finge 66.8 1.1 3.6E-05 37.4 -0.3 53 452-511 10-63 (71)
175 2d8s_A Cellular modulator of i 66.2 2.4 8.3E-05 37.2 1.9 54 452-512 15-71 (80)
176 2ldm_A Uncharacterized protein 68.8 1.3 4.5E-05 39.3 0.0 57 255-330 3-59 (81)
177 2xeu_A Ring finger protein 4; 64.8 0.79 2.7E-05 37.2 -1.4 53 452-511 3-56 (64)
178 3dpl_R Ring-box protein 1; ubi 63.7 1.7 5.7E-05 40.3 0.4 65 437-510 35-100 (106)
179 2lrq_A Protein MRG15, NUA4 com 67.6 1.5 5E-05 39.3 0.0 60 257-330 11-70 (85)
180 3sd4_A PHD finger protein 20; 62.1 14 0.00049 31.3 5.9 57 256-327 10-68 (69)
181 2eqj_A Metal-response element- 62.0 23 0.00079 30.2 7.0 54 257-328 12-65 (66)
182 3fdr_A Tudor and KH domain-con 61.9 14 0.00047 32.9 6.1 58 257-331 26-83 (94)
183 2eqm_A PHD finger protein 20-l 61.3 20 0.0007 32.0 7.1 59 256-329 17-77 (88)
184 2ct0_A Non-SMC element 1 homol 61.2 4.3 0.00015 35.2 2.6 49 453-511 16-64 (74)
185 2d8t_A Dactylidin, ring finger 60.7 5 0.00017 33.6 2.8 47 452-511 15-61 (71)
186 2diq_A Tudor and KH domain-con 59.7 19 0.00066 32.9 6.9 59 256-331 30-88 (110)
187 1wig_A KIAA1808 protein; LIM d 59.5 4.4 0.00015 34.3 2.3 37 414-450 6-42 (73)
188 3lrq_A E3 ubiquitin-protein li 58.9 2.5 8.5E-05 38.2 0.6 50 450-510 20-69 (100)
189 3pnw_C Tudor domain-containing 58.0 17 0.00058 31.6 5.8 56 258-329 17-72 (77)
190 2djb_A Polycomb group ring fin 57.8 2.5 8.5E-05 35.6 0.4 49 451-511 14-62 (72)
191 2y43_A E3 ubiquitin-protein li 57.8 4.1 0.00014 36.4 1.9 50 450-511 20-69 (99)
192 2co8_A NEDD9 interacting prote 57.6 5.1 0.00017 34.7 2.4 43 413-455 15-58 (82)
193 2ecn_A Ring finger protein 141 57.6 2.9 9.9E-05 34.7 0.8 47 451-511 14-60 (70)
194 2ysl_A Tripartite motif-contai 56.8 6.8 0.00023 32.6 3.0 51 451-511 19-69 (73)
195 2cup_A Skeletal muscle LIM-pro 56.0 8.2 0.00028 34.3 3.6 50 406-463 28-77 (101)
196 2ct0_A Non-SMC element 1 homol 55.9 4 0.00014 35.5 1.4 30 736-765 16-45 (74)
197 2ckl_B Ubiquitin ligase protei 55.4 3.2 0.00011 40.7 0.8 48 452-510 54-101 (165)
198 3m9q_A Protein MALE-specific l 55.4 8.2 0.00028 35.6 3.5 67 257-330 18-87 (101)
199 3m9p_A MALE-specific lethal 3 55.3 8.3 0.00028 36.1 3.5 66 257-330 18-87 (110)
200 2ckl_A Polycomb group ring fin 55.1 6.3 0.00021 35.7 2.7 51 449-511 12-62 (108)
201 2jtn_A LIM domain-binding prot 54.5 12 0.00043 37.1 5.0 49 406-463 82-130 (182)
202 2d8s_A Cellular modulator of i 54.2 3 0.0001 36.6 0.3 50 635-686 14-66 (80)
203 2xjy_A Rhombotin-2; oncoprotei 54.0 9.1 0.00031 35.7 3.7 54 406-464 24-78 (131)
204 2jne_A Hypothetical protein YF 53.6 2 6.7E-05 39.3 -0.9 37 414-460 33-69 (101)
205 2ro0_A Histone acetyltransfera 53.6 27 0.00091 31.6 6.5 61 251-325 16-76 (92)
206 2egp_A Tripartite motif-contai 53.5 7.3 0.00025 32.8 2.7 55 451-511 11-65 (79)
207 2zet_C Melanophilin; complex, 53.0 6.1 0.00021 39.0 2.4 64 635-703 67-130 (153)
208 2jrp_A Putative cytoplasmic pr 52.3 2.9 9.9E-05 37.1 -0.1 39 414-462 3-41 (81)
209 2csy_A Zinc finger protein 183 52.3 3.5 0.00012 35.4 0.4 46 452-510 15-60 (81)
210 1zbd_B Rabphilin-3A; G protein 51.7 19 0.00066 34.7 5.6 66 634-702 53-119 (134)
211 2yur_A Retinoblastoma-binding 51.4 6.4 0.00022 33.3 2.0 48 452-509 15-62 (74)
212 3qww_A SET and MYND domain-con 51.4 11 0.00037 43.0 4.4 31 897-927 6-36 (433)
213 2rgt_A Fusion of LIM/homeobox 50.6 17 0.0006 35.6 5.3 76 406-509 28-103 (169)
214 2k3y_A Chromatin modification- 50.6 12 0.0004 36.3 3.9 67 258-330 9-105 (136)
215 2yrv_A AT-rich interactive dom 50.2 45 0.0016 31.4 7.6 62 259-330 11-73 (117)
216 1chc_A Equine herpes virus-1 r 49.9 4.9 0.00017 33.0 1.0 49 451-511 4-52 (68)
217 3n71_A Histone lysine methyltr 49.8 11 0.00037 43.7 4.1 33 897-929 6-38 (490)
218 4ayc_A E3 ubiquitin-protein li 49.7 6.7 0.00023 37.3 2.0 45 453-510 54-98 (138)
219 2dig_A Lamin-B receptor; tudor 48.2 34 0.0012 29.2 5.7 55 255-327 9-64 (68)
220 3oa6_A MALE-specific lethal 3 47.2 10 0.00034 35.6 2.7 66 258-330 19-87 (110)
221 2yuu_A NPKC-delta, protein kin 45.7 13 0.00043 32.7 3.0 35 635-670 27-62 (83)
222 1v6g_A Actin binding LIM prote 45.6 8.6 0.0003 32.9 1.9 40 414-453 16-55 (81)
223 1rut_X Flinc4, fusion protein 45.5 6.7 0.00023 39.4 1.4 53 406-463 27-80 (188)
224 1g25_A CDK-activating kinase a 45.4 6 0.00021 32.4 0.8 51 453-511 4-55 (65)
225 2m0o_A PHD finger protein 1; t 45.1 40 0.0014 29.5 5.9 52 257-326 25-76 (79)
226 2enz_A NPKC-theta, protein kin 45.0 13 0.00044 31.0 2.8 34 636-670 23-57 (65)
227 2l7p_A Histone-lysine N-methyl 44.7 7.6 0.00026 35.8 1.4 33 468-504 26-58 (100)
228 2l8d_A Lamin-B receptor; DNA b 44.6 46 0.0016 28.3 6.0 55 256-328 7-62 (66)
229 1ptq_A Protein kinase C delta 44.4 12 0.0004 29.3 2.4 35 635-670 10-45 (50)
230 3k1l_B Fancl; UBC, ring, RWD, 44.0 11 0.00038 42.0 2.8 56 455-510 311-372 (381)
231 2ecv_A Tripartite motif-contai 43.9 5.7 0.0002 33.7 0.5 54 451-511 18-71 (85)
232 3k1l_B Fancl; UBC, ring, RWD, 43.9 6.9 0.00024 43.6 1.2 34 635-668 307-343 (381)
233 3l11_A E3 ubiquitin-protein li 43.8 13 0.00045 33.9 2.9 47 452-510 15-61 (115)
234 4a0k_B E3 ubiquitin-protein li 43.7 5.2 0.00018 37.7 0.2 68 435-511 44-112 (117)
235 2xqn_T Testin, TESS; metal-bin 43.3 16 0.00054 33.9 3.4 51 406-464 25-75 (126)
236 2enn_A NPKC-theta, protein kin 43.3 14 0.00048 32.0 2.8 34 636-670 34-68 (77)
237 1b8t_A Protein (CRP1); LIM dom 43.1 25 0.00084 35.2 5.1 46 406-459 29-74 (192)
238 2ecy_A TNF receptor-associated 42.7 28 0.00096 28.3 4.6 28 438-465 34-63 (66)
239 1faq_A RAF-1; transferase, ser 42.6 13 0.00046 29.3 2.5 31 636-670 14-44 (52)
240 2ecy_A TNF receptor-associated 42.5 7.3 0.00025 31.9 0.9 48 452-511 15-62 (66)
241 2xk0_A Polycomb protein PCL; t 42.4 44 0.0015 28.6 5.6 51 257-327 14-64 (69)
242 3a1b_A DNA (cytosine-5)-methyl 42.3 5 0.00017 39.9 -0.2 55 635-694 78-143 (159)
243 3uej_A NPKC-delta, protein kin 41.6 10 0.00035 31.6 1.7 35 635-670 19-54 (65)
244 3qwp_A SET and MYND domain-con 41.6 18 0.00062 40.9 4.3 30 897-926 4-33 (429)
245 6rxn_A Rubredoxin; electron tr 41.4 10 0.00036 30.1 1.6 34 454-508 6-39 (46)
246 3nw0_A Non-structural maintena 40.9 13 0.00043 39.2 2.6 58 619-686 168-225 (238)
247 1y8f_A UNC-13 homolog A, MUNC1 40.5 14 0.00048 30.9 2.4 35 635-670 23-58 (66)
248 1e4u_A Transcriptional repress 39.2 15 0.00051 31.9 2.4 53 451-511 10-62 (78)
249 2eli_A Protein kinase C alpha 38.6 19 0.00064 31.8 3.0 35 635-670 27-62 (85)
250 2fnf_X Putative RAS effector N 38.5 17 0.00057 31.3 2.6 33 635-670 34-66 (72)
251 2e5q_A PHD finger protein 19; 37.8 1.1E+02 0.0039 25.7 7.2 55 255-327 4-58 (63)
252 4rxn_A Rubredoxin; electron tr 37.0 20 0.0007 29.3 2.7 40 454-508 5-45 (54)
253 1v87_A Deltex protein 2; ring- 36.9 8.4 0.00029 35.1 0.5 52 635-686 24-90 (114)
254 1x4l_A Skeletal muscle LIM-pro 36.6 10 0.00035 31.6 0.9 14 411-424 33-46 (72)
255 3e9g_A Chromatin modification- 36.6 67 0.0023 30.8 6.5 68 257-330 6-103 (130)
256 1r79_A Diacylglycerol kinase, 36.4 13 0.00045 33.1 1.6 35 636-670 38-73 (84)
257 1weq_A PHD finger protein 7; s 35.9 26 0.00089 31.3 3.4 35 650-686 43-78 (85)
258 2rnz_A Histone acetyltransfera 35.1 63 0.0021 29.4 5.9 60 252-325 19-78 (94)
259 4a0k_B E3 ubiquitin-protein li 34.7 9.6 0.00033 35.9 0.4 49 635-686 47-108 (117)
260 3h8z_A FragIle X mental retard 34.6 28 0.00097 33.3 3.7 57 258-330 60-120 (128)
261 1y71_A Kinase-associated prote 34.4 46 0.0016 31.8 5.0 70 258-331 7-88 (130)
262 3fl2_A E3 ubiquitin-protein li 34.3 13 0.00044 34.5 1.3 49 451-511 51-99 (124)
263 2fnf_X Putative RAS effector N 34.3 24 0.00083 30.2 2.9 30 453-486 36-65 (72)
264 2ku7_A MLL1 PHD3-CYP33 RRM chi 34.2 7 0.00024 36.3 -0.6 35 652-686 1-43 (140)
265 1t1h_A Gspef-atpub14, armadill 33.7 16 0.00055 30.8 1.7 48 451-510 7-54 (78)
266 1jm7_A BRCA1, breast cancer ty 33.6 15 0.00051 33.1 1.6 50 451-510 20-69 (112)
267 2e61_A Zinc finger CW-type PWW 33.3 16 0.00056 31.3 1.6 16 468-483 16-33 (69)
268 3nw0_A Non-structural maintena 32.9 13 0.00044 39.2 1.1 32 735-766 180-211 (238)
269 1e8j_A Rubredoxin; iron-sulfur 32.2 31 0.0011 27.9 3.0 40 454-508 5-45 (52)
270 3pfq_A PKC-B, PKC-beta, protei 32.2 13 0.00043 44.6 1.0 92 638-763 50-145 (674)
271 2ecw_A Tripartite motif-contai 32.0 21 0.0007 30.2 2.1 54 451-511 18-71 (85)
272 2dkt_A Ring finger and CHY zin 31.6 18 0.00063 35.3 1.9 50 437-506 56-105 (143)
273 3smt_A Histone-lysine N-methyl 31.5 28 0.00094 40.4 3.7 32 898-929 93-124 (497)
274 1v5n_A PDI-like hypothetical p 31.5 17 0.00057 32.5 1.5 33 637-672 48-80 (89)
275 1bor_A Transcription factor PM 31.3 38 0.0013 26.9 3.5 44 452-511 6-49 (56)
276 3ztg_A E3 ubiquitin-protein li 30.7 14 0.00048 32.2 0.8 48 452-509 13-60 (92)
277 1z6u_A NP95-like ring finger p 30.3 15 0.00053 35.6 1.1 48 452-511 78-125 (150)
278 1j2o_A FLIN2, fusion of rhombo 30.2 14 0.00048 33.9 0.8 39 406-449 25-63 (114)
279 2pv0_B DNA (cytosine-5)-methyl 29.8 12 0.0004 42.3 0.2 66 635-708 92-168 (386)
280 1iym_A EL5; ring-H2 finger, ub 29.7 34 0.0012 26.5 2.9 47 635-685 4-50 (55)
281 1kbe_A Kinase suppressor of RA 29.6 26 0.00089 28.0 2.1 29 637-669 15-43 (49)
282 1ptq_A Protein kinase C delta 29.6 27 0.00092 27.2 2.3 35 451-486 10-44 (50)
283 2db6_A SH3 and cysteine rich d 29.6 9.2 0.00032 32.9 -0.6 35 636-671 28-63 (74)
284 1x68_A FHL5 protein; four-and- 29.6 18 0.00063 30.5 1.3 36 414-449 6-45 (76)
285 1vyx_A ORF K3, K3RING; zinc-bi 29.0 6.2 0.00021 32.7 -1.7 49 635-686 5-55 (60)
286 2ecl_A Ring-box protein 2; RNF 29.0 21 0.00072 30.7 1.6 49 635-686 14-72 (81)
287 2d8x_A Protein pinch; LIM doma 29.0 21 0.00072 29.5 1.6 33 415-447 7-39 (70)
288 1x4j_A Ring finger protein 38; 28.6 23 0.00079 29.6 1.8 47 635-686 22-68 (75)
289 1wgs_A MYST histone acetyltran 28.4 41 0.0014 32.3 3.7 58 257-325 11-68 (133)
290 3dpl_R Ring-box protein 1; ubi 27.9 14 0.00049 33.9 0.4 49 635-686 36-97 (106)
291 2ecm_A Ring finger and CHY zin 27.8 35 0.0012 26.4 2.6 47 635-685 4-50 (55)
292 2jne_A Hypothetical protein YF 27.8 22 0.00076 32.5 1.6 55 453-509 33-91 (101)
293 4b6d_A RAC GTPase-activating p 27.7 29 0.00099 28.9 2.2 35 636-671 19-53 (61)
294 2dmi_A Teashirt homolog 3; zin 27.6 55 0.0019 28.8 4.3 16 497-512 78-93 (115)
295 1rfh_A RAS association (ralgds 27.4 16 0.00054 30.1 0.5 33 635-670 21-53 (59)
296 2vut_I AREA, nitrogen regulato 27.1 26 0.0009 27.3 1.7 33 414-451 2-34 (43)
297 3dfx_A Trans-acting T-cell-spe 27.1 28 0.00096 29.4 2.0 37 412-453 6-42 (63)
298 1faq_A RAF-1; transferase, ser 27.1 29 0.001 27.2 2.1 30 452-486 14-43 (52)
299 2eli_A Protein kinase C alpha 26.8 51 0.0017 28.9 3.8 36 450-486 26-61 (85)
300 2dmd_A Zinc finger protein 64, 26.8 32 0.0011 29.1 2.5 15 497-511 62-76 (96)
301 2ecj_A Tripartite motif-contai 26.8 24 0.00084 27.6 1.6 45 451-505 14-58 (58)
302 2v3b_B Rubredoxin 2, rubredoxi 26.6 37 0.0013 27.8 2.6 40 454-508 5-45 (55)
303 2ysj_A Tripartite motif-contai 26.4 18 0.00062 29.1 0.7 46 450-505 18-63 (63)
304 2kae_A GATA-type transcription 26.3 32 0.0011 29.7 2.3 36 412-451 7-42 (71)
305 3qxy_A N-lysine methyltransfer 26.2 45 0.0015 38.0 4.2 33 897-929 37-70 (449)
306 2enz_A NPKC-theta, protein kin 26.1 46 0.0016 27.6 3.2 36 450-486 21-56 (65)
307 1yk4_A Rubredoxin, RD; electro 26.1 40 0.0014 27.3 2.7 40 454-508 4-44 (52)
308 2kn9_A Rubredoxin; metalloprot 26.1 35 0.0012 30.2 2.5 41 454-509 29-70 (81)
309 2jrp_A Putative cytoplasmic pr 26.1 40 0.0014 29.9 2.9 54 453-509 3-61 (81)
310 4ap4_A E3 ubiquitin ligase RNF 25.9 14 0.00047 34.0 -0.1 53 452-511 7-60 (133)
311 2yuu_A NPKC-delta, protein kin 25.9 44 0.0015 29.2 3.2 37 449-486 25-61 (83)
312 2dar_A PDZ and LIM domain prot 25.8 53 0.0018 28.5 3.7 39 412-450 24-62 (90)
313 2ee8_A Protein ODD-skipped-rel 25.7 33 0.0011 29.7 2.4 15 497-511 71-85 (106)
314 2cup_A Skeletal muscle LIM-pro 25.4 32 0.0011 30.4 2.2 65 414-481 6-77 (101)
315 1gnf_A Transcription factor GA 25.2 42 0.0014 26.6 2.6 34 413-451 4-37 (46)
316 1y8f_A UNC-13 homolog A, MUNC1 25.1 36 0.0012 28.3 2.4 36 450-486 22-57 (66)
317 1gh9_A 8.3 kDa protein (gene M 25.1 26 0.00088 30.3 1.4 28 454-483 6-33 (71)
318 1yop_A KTI11P; zinc finger, me 25.0 30 0.001 30.8 1.8 20 466-485 41-60 (83)
319 1rfh_A RAS association (ralgds 25.0 25 0.00087 28.8 1.3 30 453-486 23-52 (59)
320 1dx8_A Rubredoxin; electron tr 24.6 43 0.0015 28.8 2.8 42 453-509 8-50 (70)
321 1r79_A Diacylglycerol kinase, 24.5 38 0.0013 30.1 2.4 33 453-485 39-71 (84)
322 1jm7_B BARD1, BRCA1-associated 24.4 59 0.002 29.7 3.9 47 449-509 19-65 (117)
323 2ea5_A Cell growth regulator w 24.3 77 0.0026 26.4 4.3 24 437-463 34-57 (68)
324 1v5n_A PDI-like hypothetical p 23.9 27 0.00091 31.2 1.4 30 736-765 48-78 (89)
325 2wac_A CG7008-PA; unknown func 23.9 1.2E+02 0.0042 30.2 6.6 58 256-331 49-106 (218)
326 1x64_A Alpha-actinin-2 associa 23.4 34 0.0011 29.8 1.9 38 414-451 26-63 (89)
327 2yt9_A Zinc finger-containing 23.2 39 0.0013 28.5 2.3 14 498-511 64-77 (95)
328 2d8z_A Four and A half LIM dom 23.1 29 0.00098 28.6 1.3 14 411-424 29-42 (70)
329 2pk7_A Uncharacterized protein 22.6 38 0.0013 29.0 2.0 35 454-489 10-44 (69)
330 2hf1_A Tetraacyldisaccharide-1 22.1 34 0.0012 29.3 1.6 35 454-489 10-44 (68)
331 2jr6_A UPF0434 protein NMA0874 21.8 35 0.0012 29.2 1.6 35 454-489 10-44 (68)
332 2qqr_A JMJC domain-containing 21.8 81 0.0028 29.8 4.2 54 257-328 4-57 (118)
333 1rmd_A RAG1; V(D)J recombinati 21.5 19 0.00066 32.8 -0.0 50 450-511 21-70 (116)
334 2enn_A NPKC-theta, protein kin 21.4 55 0.0019 28.2 2.9 37 449-486 31-67 (77)
335 2l3k_A Rhombotin-2, linker, LI 21.3 43 0.0015 31.0 2.3 13 411-423 34-46 (123)
336 2js4_A UPF0434 protein BB2007; 21.3 35 0.0012 29.4 1.5 35 454-489 10-44 (70)
337 4b6d_A RAC GTPase-activating p 21.2 38 0.0013 28.2 1.7 33 452-486 19-51 (61)
338 2lq6_A Bromodomain-containing 21.1 44 0.0015 29.7 2.2 30 636-668 17-48 (87)
339 2e5p_A Protein PHF1, PHD finge 21.0 2E+02 0.0067 24.6 5.9 55 257-329 8-62 (68)
340 3uej_A NPKC-delta, protein kin 20.7 48 0.0016 27.4 2.3 35 451-486 19-53 (65)
341 1x62_A C-terminal LIM domain p 20.6 33 0.0011 29.1 1.3 38 413-450 15-52 (79)
342 1wyh_A SLIM 2, skeletal muscle 20.4 39 0.0013 27.8 1.6 15 411-425 31-45 (72)
No 1
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=99.88 E-value=5.3e-23 Score=194.12 Aligned_cols=98 Identities=34% Similarity=0.610 Sum_probs=81.1
Q ss_pred CCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCC-CCeEEEEEccccCCCCCCcEEEeeCCceecCccchhhhcc
Q 002201 258 DFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCI-PDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFVDRFQE 336 (954)
Q Consensus 258 ~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~-~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~d~f~~ 336 (954)
.|.+||||||||+ +||||||+|++|. .+|+.+++.++ .+.++|+||| +++|+||++.+|+||.++.++|.
T Consensus 8 ~~~~GdlVwaK~~-g~p~WPa~V~~~~-~~p~~~~~~~~~~~~~~V~FFg------~~~~awv~~~~l~p~~~~~~~~~- 78 (110)
T 2daq_A 8 KLHYKQIVWVKLG-NYRWWPAEICNPR-SVPLNIQGLKHDLGDFPVFFFG------SHDYYWVHQGRVFPYVEGDKSFA- 78 (110)
T ss_dssp SCCSSEEEEEECS-SSCEEEEEECCTT-TSCHHHHTSCCCSSCEEEEETT------TTEEEEECSSSSEECCSSCCSSS-
T ss_pred CCCCCCEEEEEeC-CCCCCceeeCChh-hCCHHHhhccCCCCcEEEEEec------CCCEEEEcHHHCcCcchhhHHHh-
Confidence 4789999999997 7999999999998 88999876554 6789999999 99999999999999999877663
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhhhhHhhhhh
Q 002201 337 QSELNDCKPSDFQMALEEAFLADQGFTEKLIQD 369 (954)
Q Consensus 337 q~~~~k~k~~~f~~AleEA~~a~~g~~e~~~~~ 369 (954)
+. .+.+...|++||+|| +++|.+.++++
T Consensus 79 ~~--~~~~~k~f~~Al~eA---~~~~~~~~~~r 106 (110)
T 2daq_A 79 EG--QTSINKTFKKALEEA---AKRFQELKASG 106 (110)
T ss_dssp CS--SCCCCSHHHHHHHHH---HHHHHHHHSSC
T ss_pred hh--cccchHHHHHHHHHH---HHHHHHHHhhh
Confidence 22 223345999999999 66677766655
No 2
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=99.85 E-value=1.3e-21 Score=179.81 Aligned_cols=84 Identities=31% Similarity=0.571 Sum_probs=70.9
Q ss_pred CCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccchhhh
Q 002201 255 GPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFVDRF 334 (954)
Q Consensus 255 ~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~d~f 334 (954)
.|.+|.+||||||||+ +||||||+|+++. +...+ ..++.++|+||| +++||||..++|+||.+++++|
T Consensus 2 ~p~~f~~GdlVwaK~~-g~p~WPa~V~~~~----~~~~k-~~~~~~~V~FFG------t~~~awv~~~~l~pf~~~~~~~ 69 (94)
T 3qby_A 2 MPHAFKPGDLVFAKMK-GYPHWPARIDDIA----DGAVK-PPPNKYPIFFFG------THETAFLGPKDLFPYDKCKDKY 69 (94)
T ss_dssp CCCCCCTTCEEEECCT-TSCCEEEEECCCC----TTSBC-CCTTCEEEEETT------TCCEEEECGGGEEEHHHHHHHH
T ss_pred CCCcCccCCEEEEecC-CCCCCCEEEeecc----ccccc-CCCCEEEEEEEc------CCCcceEchhHeeEHHHHHHHH
Confidence 4789999999999997 7999999999875 22222 346789999999 9999999999999999999998
Q ss_pred cccccCCCCChhHHHHHHHHH
Q 002201 335 QEQSELNDCKPSDFQMALEEA 355 (954)
Q Consensus 335 ~~q~~~~k~k~~~f~~AleEA 355 (954)
..+. +.+.|++||+||
T Consensus 70 ~k~~-----k~k~F~~Al~Ei 85 (94)
T 3qby_A 70 GKPN-----KRKGFNEGLWEI 85 (94)
T ss_dssp CSCC-----SSTTHHHHHHHH
T ss_pred ccCc-----cHHHHHHHHHHH
Confidence 6533 224899999999
No 3
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=99.84 E-value=2.1e-21 Score=189.38 Aligned_cols=107 Identities=23% Similarity=0.445 Sum_probs=81.7
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCC-CcEEEeeCCceecCccchhhhc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQ-RDYAWVKRGLIFPFVDFVDRFQ 335 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s-~dyaWv~~~~i~Pf~e~~d~f~ 335 (954)
..|.+||||||||+ +||||||+|+++. ..+..++.....+.|+|+||| + ++||||..++|+||.++...+.
T Consensus 21 ~~~~~GdlVwaK~~-g~P~WPa~V~~~~-~~~~~~~~~~~~~~~~V~FFg------~~~~~aWv~~~~l~pf~~~~~~~~ 92 (134)
T 2gfu_A 21 SDFSPGDLVWAKME-GYPWWPSLVYNHP-FDGTFIREKGKSVRVHVQFFD------DSPTRGWVSKRLLKPYTGSKSKEA 92 (134)
T ss_dssp CCCCTTSEEEECCT-TSCCEEEECCCCS-STTCCEEESSSCEEEEEEECS------SSCEEEEECGGGEEESCCTTSTTT
T ss_pred CCCCCCCEEEEeec-CCCCCCeeecchh-hhhhhhhccCCCceEEEEECC------CCCceEEECHHHcccCcchhHHHH
Confidence 57999999999997 7999999999987 555333222335689999999 6 6999999999999999876654
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhhhhHhhhhhhhhcc
Q 002201 336 EQSELNDCKPSDFQMALEEAFLADQGFTEKLIQDINMAA 374 (954)
Q Consensus 336 ~q~~~~k~k~~~f~~AleEA~~a~~g~~e~~~~~~~~~~ 374 (954)
.+...++.+...|++||++|.+| +....++|+++..
T Consensus 93 ~k~~~~~~~~~~~~~Ai~~A~~a---~~~~~eeR~~~~~ 128 (134)
T 2gfu_A 93 QKGGHFYSAKPEILRAMQRADEA---LNKDKIKRLELAV 128 (134)
T ss_dssp STTCTTCCCCHHHHHHHHHHHHH---HSSCHHHHHTTTT
T ss_pred hhcccchhccHHHHHHHHHHHHH---hcCCHHHHHHhhc
Confidence 33334455668999999999655 4445566766544
No 4
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=99.83 E-value=4e-21 Score=191.38 Aligned_cols=92 Identities=27% Similarity=0.456 Sum_probs=71.4
Q ss_pred CCCCCcC---CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCcee
Q 002201 249 KDDGLYG---PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIF 325 (954)
Q Consensus 249 ~~~~~~~---~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~ 325 (954)
+++.++. +.+|.+||||||||+ +||||||+|++|. . .......+.|+|+||| +++||||.+.+|+
T Consensus 10 ~~~~~~~~~~~~~f~~GdlVwaK~~-g~p~WPa~V~~~~-~----~~~~~~~~~~~V~FfG------~~~~awv~~~~l~ 77 (153)
T 4fu6_A 10 GRENLYFQGMTRDFKPGDLIFAKMK-GYPHWPARVDEVP-D----GAVKPPTNKLPIFFFG------THETAFLGPKDIF 77 (153)
T ss_dssp ---CTTTTCSGGGCCTTCEEEECCT-TSCCEEEEECCCC--------CCCCTTCEEEEETT------TCCEEEECGGGEE
T ss_pred chhhHHHhhcccCCCCCCEEEEeCC-CCCCCCEEEeEch-h----hccCCCCCEEEEEecC------CCCeEEeCHHHcc
Confidence 3444555 357999999999997 7999999999876 2 2233446789999999 9999999999999
Q ss_pred cCccchhhhcccccCCCCChhHHHHHHHHHHH
Q 002201 326 PFVDFVDRFQEQSELNDCKPSDFQMALEEAFL 357 (954)
Q Consensus 326 Pf~e~~d~f~~q~~~~k~k~~~f~~AleEA~~ 357 (954)
||.+++++|..+. +...|++||+||..
T Consensus 78 ~f~e~~~~~~k~~-----k~k~f~~Av~Eie~ 104 (153)
T 4fu6_A 78 PYSENKEKYGKPN-----KRKGFNEGLWEIDN 104 (153)
T ss_dssp EHHHHHHHHCSCC-----SSTTHHHHHHHHHH
T ss_pred ChHhHHHHHhccc-----chHHHHHHHHHHHH
Confidence 9999988885432 22479999999943
No 5
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=99.83 E-value=2.2e-21 Score=182.64 Aligned_cols=88 Identities=27% Similarity=0.537 Sum_probs=74.4
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCC-CCeEEEEEccccCCCCCCcEEEeeCCceecCccc-hhhh
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCI-PDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF-VDRF 334 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~-~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~-~d~f 334 (954)
..|.+||||||||+ +||||||+|++|. .+|+.+++... .+.|+|+||| +++||||.+++|+||.+. .+.|
T Consensus 4 ~~~~~GdlVwaK~~-gyP~WPa~V~~~~-~~p~~v~~~~~~~~~~~V~FFg------~~~~aWv~~~~l~p~~~~~~~~~ 75 (108)
T 2l89_A 4 DRLNFGDRILVKAP-GYPWWPALLLRRK-ETKDSLNTNSSFNVLYKVLFFP------DFNFAWVKRNSVKPLLDSEIAKF 75 (108)
T ss_dssp CCCCTTEEEEEECS-SSCEEEEEEEEEE-EEESSSCSSSCEEEEEEEEETT------TTEEEEECGGGEEECCHHHHHHH
T ss_pred CcccCCCEEEEEeC-CcCCCceEecCcc-cCcHHHhhccCCCCeEEEEECC------CCCEEEEchhhceeCCHHHHHHH
Confidence 46999999999998 8999999999998 88999887655 6789999999 999999999999999965 4455
Q ss_pred cccccCCCCChhHHHHHHHHH
Q 002201 335 QEQSELNDCKPSDFQMALEEA 355 (954)
Q Consensus 335 ~~q~~~~k~k~~~f~~AleEA 355 (954)
..+. +.+...|++|+++|
T Consensus 76 ~~~~---k~k~k~l~~Aye~A 93 (108)
T 2l89_A 76 LGSS---KRKSKELIEAYEAS 93 (108)
T ss_dssp HHCS---SSCCHHHHHHHHHH
T ss_pred Hhcc---CCCCHHHHHHHHHH
Confidence 5443 22336899999998
No 6
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=99.81 E-value=1.5e-20 Score=186.45 Aligned_cols=90 Identities=21% Similarity=0.455 Sum_probs=73.2
Q ss_pred CCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccchhhh
Q 002201 255 GPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFVDRF 334 (954)
Q Consensus 255 ~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~d~f 334 (954)
....|.+||||||||+ +||||||+|+++. .. ..+....+.++|+||| +++||||.+++|+||.++.++|
T Consensus 13 dg~~f~~GDLVWaKvk-G~PwWPa~V~~~~-~~---~k~~~~~~~~~V~FFG------~~~~awv~~~~L~pf~e~~e~f 81 (154)
T 3llr_A 13 DGRGFGIGELVWGKLR-GFSWWPGRIVSWW-MT---GRSRAAEGTRWVMWFG------DGKFSVVCVEKLMPLSSFCSAF 81 (154)
T ss_dssp SSCCCCTTCEEEECCT-TSCCEEEEEECGG-GT---TSCCCCTTEEEEEETT------TCCEEEEEGGGEEEGGGHHHHC
T ss_pred cCCCCccCCEEEEecC-CCCCCCEEEeccc-cc---ccccCCCCEEEEEEeC------CCCEEEEcHHHCcchhhhHHHH
Confidence 3446999999999997 7999999999987 22 2234457899999999 9999999999999999999998
Q ss_pred cccccCCCCChhHHHHHHHHHHHH
Q 002201 335 QEQSELNDCKPSDFQMALEEAFLA 358 (954)
Q Consensus 335 ~~q~~~~k~k~~~f~~AleEA~~a 358 (954)
..++. + +...|++||+||++.
T Consensus 82 ~~~~~-~--K~~~fr~AV~eAle~ 102 (154)
T 3llr_A 82 HQATY-N--KQPMYRKAIYEVLQV 102 (154)
T ss_dssp CHHHH-H--HCHHHHHHHHHHHHH
T ss_pred hhhhc-c--chHHHHHHHHHHHHH
Confidence 65432 2 236899999999543
No 7
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=99.80 E-value=3.4e-20 Score=183.45 Aligned_cols=95 Identities=25% Similarity=0.487 Sum_probs=78.0
Q ss_pred CCCCCCEEEEecCCCCCcccEEEeCCCCCC-------------ChhhhccC-------CCCeEEEEEccccCCCCCCcEE
Q 002201 258 DFYSGDIVWAKSGKNYPYWPAIVIDPMTQA-------------PDVVLRSC-------IPDAACVMFFGHCGDVNQRDYA 317 (954)
Q Consensus 258 ~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~-------------p~~v~~~~-------~~~~~~V~FFG~s~~~~s~dya 317 (954)
.|.+||||||||. +||||||+|+||.... |.+|++.. ....|||+||| +.++|+
T Consensus 36 ~~~pgdlVWAK~~-GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd-----~~~t~a 109 (158)
T 3pfs_A 36 DLEPLELVWAKCR-GYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFD-----NKRTWQ 109 (158)
T ss_dssp CCCTTCEEEEECT-TSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECS-----TTCCEE
T ss_pred CCCCCCEEEEecC-CCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcC-----CCCceE
Confidence 4999999999996 7999999999998533 77887652 37789999999 458999
Q ss_pred EeeCCceecCccchhhhcccccCCCCChhHHHHHHHHHHHHHh
Q 002201 318 WVKRGLIFPFVDFVDRFQEQSELNDCKPSDFQMALEEAFLADQ 360 (954)
Q Consensus 318 Wv~~~~i~Pf~e~~d~f~~q~~~~k~k~~~f~~AleEA~~a~~ 360 (954)
||..++|+||... +...+.++..++++.+++||++|+..+.
T Consensus 110 WV~~~~L~Pl~~d--~~~D~~kl~e~Kks~~rKAl~~AYe~A~ 150 (158)
T 3pfs_A 110 WLPRDKVLPLGVE--DTVDKLKMLEGRKTSIRKSVQVAYDRAM 150 (158)
T ss_dssp EEEGGGEEECSSC--HHHHHHHHTTTTTSTHHHHHHHHHHHHH
T ss_pred eeccccEeecCCc--hhhhhhhhccCCCHHHHHHHHHHHHHHH
Confidence 9999999999854 4555555667777889999999976533
No 8
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=99.80 E-value=6e-20 Score=173.34 Aligned_cols=85 Identities=26% Similarity=0.534 Sum_probs=69.8
Q ss_pred cCCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccchhh
Q 002201 254 YGPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFVDR 333 (954)
Q Consensus 254 ~~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~d~ 333 (954)
.....|.+|||||||++ +||||||+|+++. +..++ ...+.++|+||| +++||||.+++|+||.++.++
T Consensus 15 ~~~~~~~~GdlVwaK~k-GyP~WPa~V~~~p----~~~~k-~~~~~~~V~FFG------t~~~awv~~~~l~pf~~~~~k 82 (110)
T 1ri0_A 15 NRQKEYKCGDLVFAKMK-GYPHWPARIDEMP----EAAVK-STANKYQVFFFG------THETAFLGPKDLFPYEESKEK 82 (110)
T ss_dssp CCSSSCCTTCEEEEEET-TEEEEEEEEECCC----SSSSC-CCSSCEEEEETT------TTEEEEECSTTEECHHHHHHH
T ss_pred cccCCCCCCCEEEEEeC-CCCCCCEEEeccc----HhhcC-CCCCEEEEEEec------CCCEEEECHHHccchhhhHHH
Confidence 34457999999999997 7999999999764 33332 346789999999 999999999999999998888
Q ss_pred hcccccCCCCChhHHHHHHHHH
Q 002201 334 FQEQSELNDCKPSDFQMALEEA 355 (954)
Q Consensus 334 f~~q~~~~k~k~~~f~~AleEA 355 (954)
|..+. +...|++||+||
T Consensus 83 ~~~~~-----K~k~f~~Al~Ei 99 (110)
T 1ri0_A 83 FGKPN-----KRKGFSEGLWEI 99 (110)
T ss_dssp CCCCC-----CCHHHHHHHHHH
T ss_pred Hcccc-----ccHHHHHHHHHH
Confidence 75432 235899999999
No 9
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=99.80 E-value=4.9e-20 Score=182.16 Aligned_cols=88 Identities=22% Similarity=0.496 Sum_probs=71.5
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccchhhhcc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFVDRFQE 336 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~d~f~~ 336 (954)
..|.+||||||||+ +||||||+|+++.. ...+....+.|+|+||| +++|+||.+++|+||.++.+.|..
T Consensus 10 ~~~~~GDlVWaKvk-GyPwWPa~V~~~~~----~~~~~~~~~~~~V~FFG------~~~~awv~~~~L~p~~~~~e~f~~ 78 (147)
T 1khc_A 10 KEFGIGDLVWGKIK-GFSWWPAMVVSWKA----TSKRQAMPGMRWVQWFG------DGKFSEISADKLVALGLFSQHFNL 78 (147)
T ss_dssp SSCCTTCEEEEEET-TTEEEEEEEECGGG----TTSCCCCTTEEEEEETT------TCCEEEEEGGGCEETTSHHHHCCH
T ss_pred ccCcCCCEEEEecC-CcCCCCEEeccchh----hhcccCCCCeEEEEEec------CCCEEEEcHHHCccchHHHHHHhh
Confidence 46999999999997 79999999999872 22233346899999999 999999999999999999888864
Q ss_pred cccCCCCChhHHHHHHHHHHHH
Q 002201 337 QSELNDCKPSDFQMALEEAFLA 358 (954)
Q Consensus 337 q~~~~k~k~~~f~~AleEA~~a 358 (954)
++ .++ ...|++||+||.++
T Consensus 79 ~~-~~K--~~~f~kAv~eA~e~ 97 (147)
T 1khc_A 79 AT-FNK--LVSYRKAMYHTLEK 97 (147)
T ss_dssp HH-HHH--CHHHHHHHHHHHHH
T ss_pred hc-ccc--HHHHHHHHHHHHHH
Confidence 32 122 15899999999665
No 10
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=99.79 E-value=8e-20 Score=172.19 Aligned_cols=90 Identities=22% Similarity=0.445 Sum_probs=70.5
Q ss_pred CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCC---CCeEEEEEccccCCCCCCcEEEeeCCceecCccc-h
Q 002201 256 PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCI---PDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF-V 331 (954)
Q Consensus 256 ~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~---~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~-~ 331 (954)
+.+|.+||||||||+ +||||||+|++|. +.++.+++.++ .+.++|+||| +++||||..++|+||.++ .
T Consensus 4 ~~~~~~GdlVwaK~~-gyP~WPa~V~~p~-~~~~~~~~~~~~~~~~~~~V~FFg------~~~~aWv~~~~l~p~~~~~~ 75 (109)
T 1h3z_A 4 RVNYKPGMRVLTKMS-GFPWWPSMVVTES-KMTSVARKSKPKRAGTFYPVIFFP------NKEYLWTGSDSLTPLTSEAI 75 (109)
T ss_dssp CCCCCTTCEEEEEET-TEEEEEEEECCGG-GCCHHHHHTCCCSSSCEEEEEETT------TTCCEEEEGGGEEECCHHHH
T ss_pred cccCCCCCEEEEEeC-CcCCCCEEEcccH-HHhHHhhccCCCCCCCEEEEEEcC------CCCEEEECHHHeeeCCchHH
Confidence 467999999999997 7999999999886 55577765443 6889999999 899999999999999865 3
Q ss_pred hhhcccccCCCCChhHHHHHHHHHH
Q 002201 332 DRFQEQSELNDCKPSDFQMALEEAF 356 (954)
Q Consensus 332 d~f~~q~~~~k~k~~~f~~AleEA~ 356 (954)
+.+....+ + +..++++|+++|.
T Consensus 76 ~~~~~~~~--~-k~k~l~~Ay~~A~ 97 (109)
T 1h3z_A 76 SQFLEKPK--P-KTASLIKAYKMAQ 97 (109)
T ss_dssp HHHHHSCS--S-CCHHHHHHHHHHH
T ss_pred HHHhhccc--c-CCHHHHHHHHHHh
Confidence 33433222 2 2357888888883
No 11
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=99.77 E-value=6.9e-19 Score=168.98 Aligned_cols=98 Identities=27% Similarity=0.509 Sum_probs=74.7
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCC-------------ChhhhccC-------CCCeEEEEEccccCCCCCCcE
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQA-------------PDVVLRSC-------IPDAACVMFFGHCGDVNQRDY 316 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~-------------p~~v~~~~-------~~~~~~V~FFG~s~~~~s~dy 316 (954)
..|.+|||||||+. +||||||+|+||.... |+.|++.+ ....|||+||| +.++|
T Consensus 4 ~~~~~~dlVWAK~~-gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd-----~~~t~ 77 (130)
T 3l42_A 4 SPLDALDLVWAKCR-GYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFD-----NKRTW 77 (130)
T ss_dssp SSSCTTCEEEECCT-TSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESS-----TTCCE
T ss_pred ccCCCCCEEEEecc-cCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCC-----CCCce
Confidence 45999999999996 7999999999998555 78887643 26789999999 67999
Q ss_pred EEeeCCceecCccchhhhcccccCCCCChhHHHHHHHHHHHHHhhh
Q 002201 317 AWVKRGLIFPFVDFVDRFQEQSELNDCKPSDFQMALEEAFLADQGF 362 (954)
Q Consensus 317 aWv~~~~i~Pf~e~~d~f~~q~~~~k~k~~~f~~AleEA~~a~~g~ 362 (954)
+||..++|+||....+ +... ++..+++...++||..|++.+..+
T Consensus 78 aWv~~~~i~pl~~d~~-~D~~-kl~~s~K~~~rKav~~AYe~A~~~ 121 (130)
T 3l42_A 78 QWLPRTKLVPLGVNQD-LDKE-KMLEGRKSNIRKSVQIAYHRALQH 121 (130)
T ss_dssp EEEEGGGEEESSSCHH-HHHH-HHTCCSSHHHHHHHHHHHHHHHHH
T ss_pred EeecccceeecCCchh-hHHH-hcccCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999997632 2111 122344567888888887654444
No 12
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=99.22 E-value=5.8e-12 Score=114.03 Aligned_cols=70 Identities=31% Similarity=0.715 Sum_probs=57.6
Q ss_pred CCCCCCCCceeEeeeccC-CCeeeecC--CcCcccchhhhhhcCCeEEEEeecc---CC-ccccceEEeCCCCCCCC
Q 002201 727 LCIPSNSFVKICVICKQI-HGSCTQCC--KCSTYYHAMCASRAGYRMELHCLEK---NG-RQITKMVSYCAYHRAPN 796 (954)
Q Consensus 727 ~~i~~~~~~~~C~iC~~~-~Ga~IqC~--~C~~aFHv~CA~~aGl~me~~~~~~---~g-~~~~~~~~yC~~H~~~~ 796 (954)
.+||++||+++|.||+++ .|++|||. .|.++||++||+.+|+.|++..... ++ ...+.+.+||+.|.++.
T Consensus 9 ~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~aGl~~~~~~~~~~~~~~~~~~v~~~~yC~~HsPpg 85 (87)
T 2lq6_A 9 MNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHTPPG 85 (87)
T ss_dssp CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHHTCCEEEEEEEECTTTSCEEEEEEEECCGGGSSSS
T ss_pred cCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHCCCceEeecccccccCCccccceECeECcCCCCcC
Confidence 478999999999999987 59999997 6999999999999999999865432 11 22346889999999754
No 13
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=99.13 E-value=1.3e-11 Score=126.22 Aligned_cols=62 Identities=29% Similarity=0.822 Sum_probs=52.0
Q ss_pred cCCccccccccccCCC-CCCeeeCCCCCceeeccccccccccccccC----CCcccCCccccccccc
Q 002201 451 SKHFCGICKKVWNHSD-GGSWVRCDGCKVWVHAECDKISSSHFKDLG----GSEYYCPACKAKFNFE 512 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d-~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~----~~~Y~Cp~Cr~k~~~~ 512 (954)
+|+|||+|++.|++++ +..|||||.|++|+|..|++++.+.++.+. +..|+||.|+.+.+..
T Consensus 1 ~G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~ 67 (183)
T 3lqh_A 1 SGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPAE 67 (183)
T ss_dssp -CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSCH
T ss_pred CcCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCHH
Confidence 5899999999999887 478999999999999999999986555432 2479999999888764
No 14
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=98.91 E-value=4.1e-10 Score=116.08 Aligned_cols=59 Identities=41% Similarity=0.657 Sum_probs=52.7
Q ss_pred hhhhcccccCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhh
Q 002201 888 SLNTFRRTEHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCC 946 (954)
Q Consensus 888 ~~~~~~~~~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~ 946 (954)
...++++..+.+|.|++|.+|||||||+++|++|+||+||+||||+..+|++|++.|+.
T Consensus 42 ~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~ 100 (192)
T 2w5y_A 42 RFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDS 100 (192)
T ss_dssp HHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHH
T ss_pred hHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhh
Confidence 33444455667899999999999999999999999999999999999999999999876
No 15
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.88 E-value=8.9e-10 Score=93.84 Aligned_cols=57 Identities=32% Similarity=0.813 Sum_probs=46.5
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
.+.||++|++.|++ +..|||||.|+.|+|..|++++...++. ...|+|+.|+.+...
T Consensus 5 e~~~C~~C~~~~~~--~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~--~~~~~C~~C~~k~~~ 61 (64)
T 1we9_A 5 SSGQCGACGESYAA--DEFWICCDLCEMWFHGKCVKITPARAEH--IKQYKCPSCSNKSGP 61 (64)
T ss_dssp SCCCCSSSCCCCCS--SSCEEECSSSCCEEETTTTTCCTTGGGG--CSSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCccCC--CCCEEEccCCCCCCCccccCcChhHhcC--CCcEECCCCcCcCCC
Confidence 56799999999853 4679999999999999999998764432 358999999976643
No 16
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.82 E-value=1.9e-09 Score=95.75 Aligned_cols=66 Identities=23% Similarity=0.574 Sum_probs=51.1
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccccccccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNFELSDSERGQR 521 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~~~~~~~~~~~ 521 (954)
...|| +|++.|+ ++..|||||.|+.|+|..|.+++....+ ....|+|+.|+.+....+..+++.+|
T Consensus 11 ~~~~C-~C~~~~d--~~~~MIqCd~C~~WfH~~Cvgl~~~~~~--~~~~~~C~~C~~~~~~~~~K~~~~~~ 76 (79)
T 1wep_A 11 VPVYC-LCRQPYN--VNHFMIECGLCQDWFHGSCVGIEEENAV--DIDIYHCPDCEAVFGPSIMKNWHSGP 76 (79)
T ss_dssp CCCCS-TTSCSCC--SSSCEEEBTTTCCEEEHHHHTCCHHHHT--TCSBBCCTTTTTTSCSCBCCCCCCSC
T ss_pred CccEE-EcCCccC--CCCceEEcCCCCCcEEeeecCccccccc--CCCeEECCCcccccCCCceeeecccc
Confidence 46688 9999884 3567999999999999999999886433 23689999999887666555544444
No 17
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.81 E-value=2.4e-09 Score=101.20 Aligned_cols=55 Identities=20% Similarity=0.439 Sum_probs=39.9
Q ss_pred CCccccccccccCC---CCCCeeeCCCCCceeeccccccccccccccCCCcccCCccc
Q 002201 452 KHFCGICKKVWNHS---DGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACK 506 (954)
Q Consensus 452 g~yCpiC~k~y~~~---d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr 506 (954)
..+|.+|.+.-..+ +.++||.|+.|.+.+|..|.++.....+..+...++|+.|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 45678887654322 34689999999999999998776543334456778888887
No 18
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.81 E-value=1e-09 Score=95.69 Aligned_cols=51 Identities=31% Similarity=0.741 Sum_probs=47.4
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
+++.|.||+.++..+.+.||+||.|+++||+.|||++.+|+ +.|+|..|..
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~-g~W~C~~C~~ 65 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPE-GQWLCRHCLQ 65 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCS-SCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCC-CCcCCccCcC
Confidence 67899999998877889999999999999999999999998 9999999975
No 19
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.79 E-value=2.8e-09 Score=101.05 Aligned_cols=45 Identities=20% Similarity=0.673 Sum_probs=36.9
Q ss_pred ccccCCCccCCCCceEEcCCCCccccCccccC--ccccCCCceeEecccc
Q 002201 639 CAVCRWVEDWDYNKIIICNRCQIAVHQECYGA--RNVQDFTSWVFEIVYT 686 (954)
Q Consensus 639 C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv--~~~p~~~~W~C~~C~~ 686 (954)
|.||+..+ +.+.||.|+.|..+||..|+++ ..+|+ +.|+|..|..
T Consensus 61 C~~C~~~~--~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~ 107 (114)
T 2kwj_A 61 CILCGTSE--NDDQLLFCDDCDRGYHMYCLNPPVAEPPE-GSWSCHLCWE 107 (114)
T ss_dssp CTTTTCCT--TTTTEEECSSSCCEEETTTSSSCCSSCCS-SCCCCHHHHH
T ss_pred cCcccccC--CCCceEEcCCCCccccccccCCCccCCCC-CCeECccccc
Confidence 66776643 3478999999999999999994 56787 8999999964
No 20
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=98.77 E-value=6.2e-09 Score=110.18 Aligned_cols=53 Identities=30% Similarity=0.415 Sum_probs=49.9
Q ss_pred cccCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhh
Q 002201 894 RTEHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCC 946 (954)
Q Consensus 894 ~~~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~ 946 (954)
+..+.+|+|++|..+||||||+++|++|+||+||+||||+..++++|...|..
T Consensus 88 ~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~ 140 (232)
T 3ooi_A 88 KRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQE 140 (232)
T ss_dssp HTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHH
T ss_pred CCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhh
Confidence 56678999999999999999999999999999999999999999999988765
No 21
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.72 E-value=8.3e-09 Score=113.24 Aligned_cols=50 Identities=28% Similarity=0.397 Sum_probs=47.1
Q ss_pred ccCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHH
Q 002201 895 TEHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDL 944 (954)
Q Consensus 895 ~~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y 944 (954)
..+.+|+|++|.+|||||||+++|++|+||+||+||||+.++|++|+..|
T Consensus 130 g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~ 179 (302)
T 1ml9_A 130 GRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAES 179 (302)
T ss_dssp CCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHS
T ss_pred CCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999876
No 22
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.69 E-value=3.4e-09 Score=99.14 Aligned_cols=58 Identities=24% Similarity=0.604 Sum_probs=48.2
Q ss_pred CccccccccccCCCCCCeeeCC-CCCceeecccccccccccccc---CCCcccCCccccccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCD-GCKVWVHAECDKISSSHFKDL---GGSEYYCPACKAKFNFE 512 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd-~C~~WvH~~Cd~~~~~~~e~~---~~~~Y~Cp~Cr~k~~~~ 512 (954)
..|++|.+.|+++ ..||+|| .|+.|||.+|++++...++.+ ++..|+||.|+.+....
T Consensus 4 ~~C~iC~~p~~~~--~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~~ 65 (105)
T 2xb1_A 4 YPCGACRSEVNDD--QDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEGS 65 (105)
T ss_dssp CBCTTTCSBCCTT--SCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTTC
T ss_pred CCCCCCCCccCCC--CCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCCC
Confidence 4699999999754 4699998 999999999999998766543 56889999999776543
No 23
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.69 E-value=9.1e-09 Score=112.35 Aligned_cols=52 Identities=25% Similarity=0.266 Sum_probs=47.9
Q ss_pred cccCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHHh
Q 002201 894 RTEHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLC 945 (954)
Q Consensus 894 ~~~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~ 945 (954)
+..+.+|+|++|.++||||||+++|++|+||+||+||||+..+|++|...|.
T Consensus 122 ~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~ 173 (290)
T 3bo5_A 122 KGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQT 173 (290)
T ss_dssp GCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCC
T ss_pred cCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhc
Confidence 3456789999999999999999999999999999999999999999988764
No 24
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.68 E-value=3.6e-09 Score=95.94 Aligned_cols=51 Identities=31% Similarity=0.741 Sum_probs=47.4
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
+++.|.||+.++..+.+.||+||.|..+||+.|||++.+|+ +.|+|..|..
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~-g~W~C~~C~~ 74 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPE-GQWLCRHCLQ 74 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCS-SCCCCHHHHH
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCC-CceECccccC
Confidence 57899999998877788999999999999999999999998 9999999986
No 25
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.67 E-value=1e-08 Score=112.41 Aligned_cols=52 Identities=19% Similarity=0.280 Sum_probs=48.4
Q ss_pred ccCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhh
Q 002201 895 TEHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCC 946 (954)
Q Consensus 895 ~~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~ 946 (954)
..+.+|.|++|.++||||||+++|++|+||+||+||||+.++|++|++.|+.
T Consensus 134 g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~ 185 (299)
T 1mvh_A 134 GRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDD 185 (299)
T ss_dssp CCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCS
T ss_pred cccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhc
Confidence 3467899999999999999999999999999999999999999999988854
No 26
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=98.67 E-value=1.6e-08 Score=101.11 Aligned_cols=51 Identities=22% Similarity=0.356 Sum_probs=48.4
Q ss_pred cCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhh
Q 002201 896 EHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCC 946 (954)
Q Consensus 896 ~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~ 946 (954)
...++.|.++..+||||||+++|++|+||+||+||+|+..++++|+..|..
T Consensus 28 ~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~ 78 (166)
T 3f9x_A 28 KEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQ 78 (166)
T ss_dssp CCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTT
T ss_pred CccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhh
Confidence 456799999999999999999999999999999999999999999999976
No 27
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=98.66 E-value=2.3e-08 Score=108.56 Aligned_cols=54 Identities=28% Similarity=0.456 Sum_probs=50.5
Q ss_pred cccCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhhh
Q 002201 894 RTEHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCCS 947 (954)
Q Consensus 894 ~~~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~~ 947 (954)
+..+.+|+|++|..+||||||+++|++|+||+||+||||+..++++|...|...
T Consensus 113 ~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~ 166 (278)
T 3h6l_A 113 RKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARN 166 (278)
T ss_dssp TTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHHHHT
T ss_pred CCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHHHhc
Confidence 556789999999999999999999999999999999999999999999998753
No 28
>1h5p_A Nuclear autoantigen SP100-B; transcription, DNA binding, SAND domain, KDWK, nuclear protein, alternative splicing; NMR {Homo sapiens} SCOP: d.217.1.1
Probab=98.63 E-value=8.4e-09 Score=93.59 Aligned_cols=75 Identities=21% Similarity=0.353 Sum_probs=61.0
Q ss_pred ccCCCceeeeecccceeeecccc--ceeeeecccCCc-ccccchhhhccCC-Ccccccccch--hhhhhHhhhcccccCC
Q 002201 532 LVLPNNVTVLCSGVEGIYYPSLH--LVVCKCGFCGTE-KLALSDWERHTGS-KLRNWRTSVR--MLQLAEYHANTVVSAK 605 (954)
Q Consensus 532 ~~~p~~~~v~c~~veG~~~~~~~--gi~ckC~~c~~~-~~spsefE~h~G~-r~K~wk~Sir--m~~l~~~~~~~~~~~~ 605 (954)
+..| .|||+||.++|+||.+++ |+.-+||+.+++ -+||+|||..+|. ++|+|+.||| ..+|..++..+ .++.
T Consensus 7 f~~~-~lPVtCG~~~G~L~k~kf~~G~~~KCI~~~~g~w~TP~EFe~~~g~~~sKdWKrSIR~~G~~L~~Lme~g-~L~~ 84 (95)
T 1h5p_A 7 FKQS-ELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENK-FLPE 84 (95)
T ss_dssp GGGS-EEEEEETTEEEEEEHHHHTTGGGSCCEEETTTEEECHHHHHHHHTCSTTCCHHHHCEETTEEHHHHHHHS-SSCC
T ss_pred ccCC-ccceeeCCcEEEEehhhhcCCCCccCeEeCCCeEEChHHhhhhcCcccCcCcceeeEECCEEHHHHHHCC-CcCC
Confidence 3344 699999999999999998 899999999764 5899999999999 9999999999 45566555555 4455
Q ss_pred CCC
Q 002201 606 PPK 608 (954)
Q Consensus 606 ~~~ 608 (954)
||.
T Consensus 85 ~~~ 87 (95)
T 1h5p_A 85 PPS 87 (95)
T ss_dssp SCC
T ss_pred Ccc
Confidence 554
No 29
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.61 E-value=4.9e-09 Score=89.87 Aligned_cols=52 Identities=25% Similarity=0.701 Sum_probs=44.1
Q ss_pred CccccccccccCCCCCCeeeCC-CCCceeecccccccccccccc---CCCcccCCccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCD-GCKVWVHAECDKISSSHFKDL---GGSEYYCPACK 506 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd-~C~~WvH~~Cd~~~~~~~e~~---~~~~Y~Cp~Cr 506 (954)
..|++|.+.|+++ ..||+|| .|++|+|..|.+++...++.+ +...|+||.|.
T Consensus 9 ~~C~~C~~p~~~~--~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 9 YPCGICTNEVNDD--QDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp CBCTTTCSBCCTT--SCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCccCCCccCCC--CCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 4699999998754 5699999 999999999999999876543 56789999996
No 30
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.61 E-value=2.5e-08 Score=109.34 Aligned_cols=51 Identities=25% Similarity=0.397 Sum_probs=46.2
Q ss_pred cCCceEEEecC-ccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhh
Q 002201 896 EHDRVCFGRSG-IHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCC 946 (954)
Q Consensus 896 ~~~~~~v~~S~-ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~ 946 (954)
.+.+|.|+++. +|||||||+++|++|+||+||+||||+.++|++|+..|+.
T Consensus 138 ~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~ 189 (300)
T 2r3a_A 138 TQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDN 189 (300)
T ss_dssp CCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCH
T ss_pred ccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhh
Confidence 45678888875 8999999999999999999999999999999999988764
No 31
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.60 E-value=5.8e-08 Score=91.33 Aligned_cols=45 Identities=20% Similarity=0.578 Sum_probs=37.2
Q ss_pred ccccCCCccCCCCceEEcCCCCccccCccccCc--cccCCCceeEecccc
Q 002201 639 CAVCRWVEDWDYNKIIICNRCQIAVHQECYGAR--NVQDFTSWVFEIVYT 686 (954)
Q Consensus 639 C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~--~~p~~~~W~C~~C~~ 686 (954)
|.||+..+. .+.||.|+.|..+||..|+.++ .+|+ +.|+|..|..
T Consensus 57 C~~C~~~~~--~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~ 103 (111)
T 2ysm_A 57 CQNCKQSGE--DSKMLVCDTCDKGYHTFCLQPVMKSVPT-NGWKCKNCRI 103 (111)
T ss_dssp CTTTCCCSC--CTTEEECSSSCCEEEGGGSSSCCSSCCS-SCCCCHHHHC
T ss_pred ccccCccCC--CCCeeECCCCCcHHhHHhcCCccccCCC-CCcCCcCCcC
Confidence 777776543 3589999999999999999954 5677 8999999976
No 32
>1ufn_A Putative nuclear protein homolog 5830484A20RIK; SAND domain, KDWK motif, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.217.1.1
Probab=98.58 E-value=1.4e-08 Score=92.08 Aligned_cols=72 Identities=15% Similarity=0.274 Sum_probs=59.9
Q ss_pred CCceeeeecccceeeecccc--ceeeeecccCCc-ccccchhhhccCC-Ccccccccch--hhhhhHhhhcccccCCCC
Q 002201 535 PNNVTVLCSGVEGIYYPSLH--LVVCKCGFCGTE-KLALSDWERHTGS-KLRNWRTSVR--MLQLAEYHANTVVSAKPP 607 (954)
Q Consensus 535 p~~~~v~c~~veG~~~~~~~--gi~ckC~~c~~~-~~spsefE~h~G~-r~K~wk~Sir--m~~l~~~~~~~~~~~~~~ 607 (954)
...|+|+|+.++|+||.+++ |+.-+|++.+++ -+||+|||..+|. ++|+||.||| ...|..++..+ .++.||
T Consensus 14 ~~~lPVtCG~~~G~L~k~k~~~G~~~kCI~~~dg~w~TP~EFe~~~g~~~sKdWKrSIr~~G~~Lr~Lme~g-~L~~~p 91 (94)
T 1ufn_A 14 SPTLPVTCGKAKGTLFQEKLKQGASKKCIQNEAGDWLTVKEFLNEGGRATSKDWKGVIRCNGETLRHLEQKG-LLFSGP 91 (94)
T ss_dssp SSEEEEEETTEEEEEEHHHHHSCTTSCCEECTTCCEECHHHHHHHHTCTTCSCHHHHCEETTEEHHHHHHTT-CCCCSC
T ss_pred CCccceeecCcEEEEEHHHhcCCCCcccEEeCCCcEEChHHhhhhcCcccccCcceeeEECCEeHHHHHHCC-CcCCCC
Confidence 77899999999999999888 889999999864 5899999999999 9999999999 44566555544 444444
No 33
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.56 E-value=3.4e-08 Score=92.94 Aligned_cols=79 Identities=24% Similarity=0.502 Sum_probs=63.2
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccC-CCceeEeccccCcCCCCcccCCCceeeccccCcCCceE
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQD-FTSWVFEIVYTEGGALKPTDVDSLWVHVTCAWFQPEVS 713 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~-~~~W~C~~C~~~gGaLK~t~~~g~WvHv~CAlw~Pev~ 713 (954)
+++.|.||++.+. .+.||.|+.|+.+||..|+++...+. .+.|+|..|.
T Consensus 6 ~~~~C~~C~~~g~--~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~---------------------------- 55 (111)
T 2ysm_A 6 SGANCAVCDSPGD--LLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK---------------------------- 55 (111)
T ss_dssp CCSCBTTTCCCCC--TTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC----------------------------
T ss_pred CCCCCcCCCCCCC--CcCCeECCCCCCCcChHHhCCccccccccCccCCcCC----------------------------
Confidence 6789999998753 35789999999999999999886532 2788888883
Q ss_pred eCCCCCcccccccCCCCCCCCceeEeeeccCC--CeeeecCCcCcccchhhhhhc
Q 002201 714 FASDEKMEPALGILCIPSNSFVKICVICKQIH--GSCTQCCKCSTYYHAMCASRA 766 (954)
Q Consensus 714 f~~~~~~~pv~gi~~i~~~~~~~~C~iC~~~~--Ga~IqC~~C~~aFHv~CA~~a 766 (954)
.|.+|++.+ ..++.|..|.++||..|....
T Consensus 56 -----------------------~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~pp 87 (111)
T 2ysm_A 56 -----------------------VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPV 87 (111)
T ss_dssp -----------------------CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSC
T ss_pred -----------------------cccccCccCCCCCeeECCCCCcHHhHHhcCCc
Confidence 377777542 258999999999999998653
No 34
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.53 E-value=3e-08 Score=106.74 Aligned_cols=50 Identities=26% Similarity=0.381 Sum_probs=46.7
Q ss_pred CCceEEEecCcc--CceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhh
Q 002201 897 HDRVCFGRSGIH--GWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCC 946 (954)
Q Consensus 897 ~~~~~v~~S~ih--G~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~ 946 (954)
.+.+.|.+|.|| ||||||+++|++|+||+||+||||+..++++|+..|+.
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~~ 159 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNG 159 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGCS
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhcc
Confidence 457999999999 99999999999999999999999999999999988754
No 35
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.53 E-value=3.8e-08 Score=80.60 Aligned_cols=47 Identities=32% Similarity=0.868 Sum_probs=38.6
Q ss_pred cccccccccCCCCCCeeeCC-CCCceeeccccccccccccccCCCcccCCccc
Q 002201 455 CGICKKVWNHSDGGSWVRCD-GCKVWVHAECDKISSSHFKDLGGSEYYCPACK 506 (954)
Q Consensus 455 CpiC~k~y~~~d~~~~VqCd-~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr 506 (954)
|++|++.|. ++..||+|| .|+.|+|..|.+++....+ ...|+||.|+
T Consensus 5 cc~C~~p~~--~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~---~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCK--DKVDWVQCDGGCDEWFHQVCVGVSPEMAE---NEDYICINCA 52 (52)
T ss_dssp CTTCCCCCC--TTCCEEECTTTTCCEEETTTTTCCHHHHH---HSCCCCSCC-
T ss_pred CCCCcCccC--CCCcEEEeCCCCCccCcccccCCCccccC---CCCEECCCCC
Confidence 789999885 456799999 8999999999999876432 2689999995
No 36
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=98.51 E-value=2.4e-08 Score=94.78 Aligned_cols=45 Identities=29% Similarity=0.386 Sum_probs=41.8
Q ss_pred cCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHH
Q 002201 896 EHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLR 940 (954)
Q Consensus 896 ~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~R 940 (954)
..++++|.+|.+|||||||+++|++|++|+||.|++|+.++++.+
T Consensus 2 ~~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~ 46 (119)
T 1n3j_A 2 FNDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTA 46 (119)
T ss_dssp BCSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHH
T ss_pred CCCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhc
Confidence 457899999999999999999999999999999999999988763
No 37
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.51 E-value=4.2e-08 Score=85.55 Aligned_cols=54 Identities=31% Similarity=0.628 Sum_probs=41.6
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
..|| +|++.++ ++..|||||.|+.|+|..|.+++... .....|+|+.|+.+...
T Consensus 16 ~~~C-~C~~~~~--~g~~mI~Cd~C~~W~H~~Cvg~~~~~---~~~~~~~C~~C~~~~~p 69 (72)
T 1wee_A 16 KVDC-KCGTKDD--DGERMLACDGCGVWHHTRCIGINNAD---ALPSKFLCFRCIELSGP 69 (72)
T ss_dssp EECC-TTCCCSC--CSSCEEECSSSCEEEETTTTTCCTTS---CCCSCCCCHHHHHHCSS
T ss_pred ceEe-eCCCccC--CCCcEEECCCCCCccCCeeeccCccc---cCCCcEECCCccCCCCC
Confidence 4578 6888653 44579999999999999999998642 13468999999976543
No 38
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.50 E-value=3.4e-08 Score=84.47 Aligned_cols=51 Identities=22% Similarity=0.536 Sum_probs=44.5
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCcc----c-cCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARN----V-QDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~----~-p~~~~W~C~~C~~ 686 (954)
++..|.||+.+...+.+.||+|+.|..+||+.||+++. + |+ +.|+|..|..
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~-~~W~C~~C~~ 60 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSD-EKWLCRQCVF 60 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSS-CCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCC-CCEECCCCcC
Confidence 57799999998767778999999999999999999863 3 66 8999999974
No 39
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.50 E-value=1.5e-08 Score=89.12 Aligned_cols=56 Identities=32% Similarity=0.789 Sum_probs=44.0
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeecccccccccccccc--CCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDL--GGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~--~~~~Y~Cp~Cr~k~~~ 511 (954)
..|| +|++.|. +..|||||.|+.|+|..|.+++....+.+ ....|+|+.|+.+..+
T Consensus 16 ~~~C-~C~~~~~---~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 16 ALYC-ICRQPHN---NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp CCCS-TTCCCCC---SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCEE-ECCCccC---CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 4678 8998874 45799999999999999999987643322 3468999999976643
No 40
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.49 E-value=2.6e-08 Score=87.55 Aligned_cols=57 Identities=23% Similarity=0.661 Sum_probs=44.5
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNFE 512 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~~ 512 (954)
...|| +|++.|+ ++..|||||.|+.|+|..|.+++..... ....|+|+.|+.+....
T Consensus 9 ~~~yC-iC~~~~~--~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~--~~~~~~C~~C~~~~~~~ 65 (75)
T 3kqi_A 9 VPVYC-VCRLPYD--VTRFMIECDACKDWFHGSCVGVEEEEAP--DIDIYHCPNCEKTHGKS 65 (75)
T ss_dssp CCEET-TTTEECC--TTSCEEECTTTCCEEEHHHHTCCTTTGG--GBSSCCCHHHHHHHCCC
T ss_pred CeeEE-ECCCcCC--CCCCEEEcCCCCCCEecccccccccccC--CCCEEECCCCcccCCCC
Confidence 45577 9998774 3467999999999999999999876333 12479999999876554
No 41
>1oqj_A Glucocorticoid modulatory element binding protein-1; SAND domain, alpha-beta fold, KDWK motif, zinc-binding motif, DNA binding protein; 1.55A {Homo sapiens} SCOP: d.217.1.1
Probab=98.47 E-value=4e-08 Score=89.75 Aligned_cols=64 Identities=14% Similarity=0.305 Sum_probs=54.9
Q ss_pred ceeeeecccceeeecccc---ceeeeecccCCcccccchhhhccCC-Ccccccccch--hhhhhHhhhcc
Q 002201 537 NVTVLCSGVEGIYYPSLH---LVVCKCGFCGTEKLALSDWERHTGS-KLRNWRTSVR--MLQLAEYHANT 600 (954)
Q Consensus 537 ~~~v~c~~veG~~~~~~~---gi~ckC~~c~~~~~spsefE~h~G~-r~K~wk~Sir--m~~l~~~~~~~ 600 (954)
.|||+|+.++|+||.+++ |+.-+||+.+++-+||+|||..+|. ++|+||.||| ..+|..++..+
T Consensus 9 ~lPVtCG~~~GiL~~~kf~~~G~~~KCI~~~~~w~TP~EFe~~~gk~~sKdWK~sIR~~G~~L~~Lme~g 78 (97)
T 1oqj_A 9 AYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSG 78 (97)
T ss_dssp EEEEEETTEEEEEEGGGCCTTCTTSCCEEETTEEECHHHHHHHTTCGGGSCHHHHSEETTEEHHHHHHTT
T ss_pred eccEeeCCeEEEEEhhhhccCCCCccCccCCCEEEChHHHhhhcCcCCCCCcchheEECCeEHHHHHHCC
Confidence 588999999999998776 8999999999988999999999998 9999999999 44555444433
No 42
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=98.47 E-value=1.2e-07 Score=99.53 Aligned_cols=48 Identities=23% Similarity=0.381 Sum_probs=43.9
Q ss_pred CCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHHHH
Q 002201 897 HDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDL 944 (954)
Q Consensus 897 ~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y 944 (954)
.+.|+|++|..+||||||+++|++|+||+||+||||+.+++++|...+
T Consensus 73 ~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~ 120 (222)
T 3ope_A 73 VQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQ 120 (222)
T ss_dssp CSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHT
T ss_pred cccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHH
Confidence 346999999999999999999999999999999999999999887543
No 43
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.45 E-value=7.8e-08 Score=104.81 Aligned_cols=50 Identities=24% Similarity=0.340 Sum_probs=46.8
Q ss_pred CCceEEEecCccC--ceeeeccccCCCCeEEEecceecCHHHHHHHHHHHhh
Q 002201 897 HDRVCFGRSGIHG--WGLFARRNIQEGEMVLEYRGEQVRRSIADLRERDLCC 946 (954)
Q Consensus 897 ~~~~~v~~S~ihG--~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~~y~~ 946 (954)
.++|.|++|.||| |||||+++|++|+||+||+||+|+..+|++|+..|+.
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~~ 213 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNG 213 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGCT
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhccc
Confidence 4579999999999 9999999999999999999999999999999887754
No 44
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.45 E-value=7.9e-08 Score=104.83 Aligned_cols=49 Identities=35% Similarity=0.535 Sum_probs=45.0
Q ss_pred cccCCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHHHHHHH
Q 002201 894 RTEHDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRER 942 (954)
Q Consensus 894 ~~~~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re~ 942 (954)
+..+.+|+|++|.++||||||+++|++|+||+||+||||+.++|++|+.
T Consensus 143 ~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~ 191 (287)
T 3hna_A 143 NGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREE 191 (287)
T ss_dssp GCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCSC
T ss_pred cCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhcc
Confidence 3456789999999999999999999999999999999999999998863
No 45
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.44 E-value=6.5e-08 Score=84.85 Aligned_cols=54 Identities=30% Similarity=0.723 Sum_probs=42.9
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
...+|++|++.+ ++..||+||.|++|+|..|.+++... .+...|+||.|+.+.+
T Consensus 17 ~~~~C~~C~~~~---~~~~mi~CD~C~~wfH~~Cv~~~~~~---~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 17 QIWICPGCNKPD---DGSPMIGCDDCDDWYHWPCVGIMAAP---PEEMQWFCPKCANKIK 70 (75)
T ss_dssp EEECBTTTTBCC---SSCCEEECSSSSSEEEHHHHTCSSCC---CSSSCCCCTTTHHHHC
T ss_pred CCcCCCCCCCCC---CCCCEEEcCCCCcccccccCCCCccC---CCCCCEEChhccCchh
Confidence 345799998875 34579999999999999999987752 2346899999987653
No 46
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.44 E-value=6e-08 Score=91.91 Aligned_cols=77 Identities=19% Similarity=0.477 Sum_probs=61.3
Q ss_pred CcccccCCCcc-----CCCCceEEcCCCCccccCccccCc-----cccCCCceeEeccccCcCCCCcccCCCceeecccc
Q 002201 637 ERCAVCRWVED-----WDYNKIIICNRCQIAVHQECYGAR-----NVQDFTSWVFEIVYTEGGALKPTDVDSLWVHVTCA 706 (954)
Q Consensus 637 ~~C~VC~~~e~-----~~~~~Li~C~~C~~avH~~CyGv~-----~~p~~~~W~C~~C~~~gGaLK~t~~~g~WvHv~CA 706 (954)
+.|.+|..++. .+.+.||.|+.|+.+||..|+++. .++. +.|+|..|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~-~~W~C~~C~--------------------- 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKT-YKWQCIECK--------------------- 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHH-TTCCCGGGC---------------------
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCC-CccCccccC---------------------
Confidence 47999987652 234699999999999999999986 3455 788888873
Q ss_pred CcCCceEeCCCCCcccccccCCCCCCCCceeEeeeccC--CCeeeecCCcCcccchhhhhh
Q 002201 707 WFQPEVSFASDEKMEPALGILCIPSNSFVKICVICKQI--HGSCTQCCKCSTYYHAMCASR 765 (954)
Q Consensus 707 lw~Pev~f~~~~~~~pv~gi~~i~~~~~~~~C~iC~~~--~Ga~IqC~~C~~aFHv~CA~~ 765 (954)
.|.+|++. .+.+|.|..|..+||..|...
T Consensus 60 ------------------------------~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~p 90 (114)
T 2kwj_A 60 ------------------------------SCILCGTSENDDQLLFCDDCDRGYHMYCLNP 90 (114)
T ss_dssp ------------------------------CCTTTTCCTTTTTEEECSSSCCEEETTTSSS
T ss_pred ------------------------------ccCcccccCCCCceEEcCCCCccccccccCC
Confidence 26666653 578999999999999999765
No 47
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.44 E-value=7.1e-08 Score=87.41 Aligned_cols=51 Identities=22% Similarity=0.425 Sum_probs=45.0
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCcc------ccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARN------VQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~------~p~~~~W~C~~C~~ 686 (954)
.+..|.||+..+..+.|.||+|+.|..+||+.||+++. +|+ +.|+|..|..
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~-g~W~C~~C~~ 71 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPR-LVWYCARCTR 71 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTT-CCCCCHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCC-CCeeCccccc
Confidence 35689999998776678999999999999999999874 566 9999999987
No 48
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.41 E-value=1.1e-07 Score=82.08 Aligned_cols=50 Identities=28% Similarity=0.840 Sum_probs=40.9
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKA 507 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~ 507 (954)
....|| +|++.+. +..|||||.|+.|+|..|.+++...+ ...|+|+.|+.
T Consensus 17 ~~~~~C-iC~~~~~---~~~MIqCd~C~~WfH~~Cvgi~~~~~----~~~~~C~~C~~ 66 (68)
T 3o70_A 17 QGLVTC-FCMKPFA---GRPMIECNECHTWIHLSCAKIRKSNV----PEVFVCQKCRD 66 (68)
T ss_dssp TTCCCS-TTCCCCT---TCCEEECTTTCCEEETTTTTCCTTSC----CSSCCCHHHHT
T ss_pred CCceEe-ECCCcCC---CCCEEECCCCCccccccccCcCcccC----CCcEECCCCCC
Confidence 356789 9998664 56799999999999999999987622 25899999984
No 49
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.40 E-value=2.2e-07 Score=87.09 Aligned_cols=44 Identities=18% Similarity=0.443 Sum_probs=40.0
Q ss_pred CCCcccccCCCccCCCCceEEcC--CCCccccCccccCccccCCCceeEecc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICN--RCQIAVHQECYGARNVQDFTSWVFEIV 684 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~--~C~~avH~~CyGv~~~p~~~~W~C~~C 684 (954)
+++.|.||+++ ++||.|| .|..+||..|+|+..+|+ +.|+|..|
T Consensus 14 ~~~~C~~C~~~-----G~ll~CD~~~Cp~~fH~~Cl~L~~~P~-g~W~Cp~c 59 (107)
T 4gne_A 14 HEDYCFQCGDG-----GELVMCDKKDCPKAYHLLCLNLTQPPY-GKWECPWH 59 (107)
T ss_dssp SCSSCTTTCCC-----SEEEECCSTTCCCEECTGGGTCSSCCS-SCCCCGGG
T ss_pred CCCCCCcCCCC-----CcEeEECCCCCCcccccccCcCCcCCC-CCEECCCC
Confidence 57889999965 6899999 899999999999999998 99999887
No 50
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.37 E-value=1.1e-07 Score=89.67 Aligned_cols=79 Identities=19% Similarity=0.468 Sum_probs=62.2
Q ss_pred CCcccccCCCcc----CCCCceEEcCCCCccccCccccCc-----cccCCCceeEeccccCcCCCCcccCCCceeecccc
Q 002201 636 TERCAVCRWVED----WDYNKIIICNRCQIAVHQECYGAR-----NVQDFTSWVFEIVYTEGGALKPTDVDSLWVHVTCA 706 (954)
Q Consensus 636 ~~~C~VC~~~e~----~~~~~Li~C~~C~~avH~~CyGv~-----~~p~~~~W~C~~C~~~gGaLK~t~~~g~WvHv~CA 706 (954)
...|.+|...+. .+.+.||.|+.|+.+||..|+++. .++. +.|+|..|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~-~~W~C~~C~--------------------- 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKA-LRWQCIECK--------------------- 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHT-SCCCCTTTC---------------------
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhc-cccccccCC---------------------
Confidence 558999987642 234689999999999999999874 3455 889999984
Q ss_pred CcCCceEeCCCCCcccccccCCCCCCCCceeEeeeccC---CCeeeecCCcCcccchhhhhhc
Q 002201 707 WFQPEVSFASDEKMEPALGILCIPSNSFVKICVICKQI---HGSCTQCCKCSTYYHAMCASRA 766 (954)
Q Consensus 707 lw~Pev~f~~~~~~~pv~gi~~i~~~~~~~~C~iC~~~---~Ga~IqC~~C~~aFHv~CA~~a 766 (954)
.|.+|+.. .+.++.|..|..+||..|....
T Consensus 63 ------------------------------~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~ 95 (112)
T 3v43_A 63 ------------------------------TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPP 95 (112)
T ss_dssp ------------------------------CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSC
T ss_pred ------------------------------ccccccCcCCCccceEEcCCCCCeeecccCCCC
Confidence 36777653 3689999999999999997543
No 51
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.36 E-value=1.9e-07 Score=76.44 Aligned_cols=47 Identities=30% Similarity=0.894 Sum_probs=38.1
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKA 507 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~ 507 (954)
.|| +|++.+. +..|||||.|+.|+|..|.+++...+ ...|+||.|+.
T Consensus 5 ~~C-~C~~~~~---~~~MI~Cd~C~~W~H~~Cvgi~~~~~----~~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTC-FCMKPFA---GRPMIECNECHTWIHLSCAKIRKSNV----PEVFVCQKCRD 51 (52)
T ss_dssp BCS-TTCCBCT---TCCEEECTTTCCEEETTTTTCCGGGC----CSSCCCHHHHT
T ss_pred eEE-EeCCcCC---CCCEEEcCCCCccccccccCCCcccC----CCcEECcCCCC
Confidence 456 7888553 56899999999999999999988622 35899999974
No 52
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.34 E-value=1.8e-07 Score=79.13 Aligned_cols=50 Identities=18% Similarity=0.509 Sum_probs=42.4
Q ss_pred cccCCCCcccccCCCccCCCCceEEcCCCCccccCccccC--ccccCCCceeEecccc
Q 002201 631 YAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGA--RNVQDFTSWVFEIVYT 686 (954)
Q Consensus 631 ~~~~~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv--~~~p~~~~W~C~~C~~ 686 (954)
..+.+++.|.||+.+ +.||.|+.|..+||+.|+++ ..+|+ +.|+|..|..
T Consensus 4 ~~d~~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~ 55 (61)
T 1mm2_A 4 GSDHHMEFCRVCKDG-----GELLCCDTCPSSYHIHCLNPPLPEIPN-GEWLCPRCTC 55 (61)
T ss_dssp CSCSSCSSCTTTCCC-----SSCBCCSSSCCCBCSSSSSSCCSSCCS-SCCCCTTTTT
T ss_pred cccCCCCcCCCCCCC-----CCEEEcCCCCHHHcccccCCCcCcCCC-CccCChhhcC
Confidence 334467899999975 68999999999999999994 56777 9999999974
No 53
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.33 E-value=1.6e-07 Score=93.11 Aligned_cols=45 Identities=22% Similarity=0.315 Sum_probs=40.9
Q ss_pred ccccCCceEEEecCcc--CceeeeccccCCCCeEEEecceecCHHHH
Q 002201 893 RRTEHDRVCFGRSGIH--GWGLFARRNIQEGEMVLEYRGEQVRRSIA 937 (954)
Q Consensus 893 ~~~~~~~~~v~~S~ih--G~Glfa~~~i~~g~~ViEY~GEvI~~~~a 937 (954)
+++..+.|.|++|.|+ ||||||+++|++|+||+||+||+|+.+++
T Consensus 24 ~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~ 70 (149)
T 2qpw_A 24 LRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQV 70 (149)
T ss_dssp HHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGC
T ss_pred HhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHh
Confidence 3566789999999987 99999999999999999999999998765
No 54
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.26 E-value=2.9e-07 Score=77.38 Aligned_cols=48 Identities=27% Similarity=0.936 Sum_probs=39.1
Q ss_pred cCCccccccccccCCCCCCeeeCCC--CC-ceeeccccccccccccccCCCcccCCccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDG--CK-VWVHAECDKISSSHFKDLGGSEYYCPACKAK 508 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~--C~-~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k 508 (954)
...|| +|++.+. ++||+||. |. .|+|..|.+++.. +...|+||.|+.+
T Consensus 8 e~~yC-~C~~~~~----g~mi~CD~~~C~~~wfH~~Cvgl~~~-----p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 8 EPTYC-LCHQVSY----GEMIGCDNPDCPIEWFHFACVDLTTK-----PKGKWFCPRCVQE 58 (59)
T ss_dssp CCEET-TTTEECC----SEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHHHCC
T ss_pred CCcEE-ECCCCCC----CCeeEeeCCCCCCCCEecccCCcccC-----CCCCEECcCccCc
Confidence 45688 9998752 47999999 77 6999999998765 4578999999864
No 55
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.24 E-value=7.6e-07 Score=77.57 Aligned_cols=49 Identities=27% Similarity=0.905 Sum_probs=39.4
Q ss_pred cCCccccccccccCCCCCCeeeCCC--CC-ceeeccccccccccccccCCCcccCCcccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDG--CK-VWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~--C~-~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...|| +|++.+. +.||+||. |. .|+|..|.+++.. +...|+||.|+.+.
T Consensus 15 ~~~~C-~C~~~~~----g~MI~CD~~~C~~~wfH~~Cvgl~~~-----p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 15 EPTYC-LCHQVSY----GEMIGCDNPDCSIEWFHFACVGLTTK-----PRGKWFCPRCSQES 66 (71)
T ss_dssp SCCCS-TTCCCSC----SSEECCSCSSCSCCCEETTTTTCSSC-----CSSCCCCTTTSSCS
T ss_pred CCCEE-ECCCCCC----CCEeEeeCCCCCCccEecccCCcCcC-----CCCCEECCCCCccc
Confidence 45788 8988652 47999999 77 6999999998764 45789999998654
No 56
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.24 E-value=3.6e-07 Score=80.92 Aligned_cols=56 Identities=23% Similarity=0.666 Sum_probs=42.6
Q ss_pred cCCccccccccccCCCCCCeeeCC--CCCceeeccccccccccccc--cCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCD--GCKVWVHAECDKISSSHFKD--LGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd--~C~~WvH~~Cd~~~~~~~e~--~~~~~Y~Cp~Cr~k~~ 510 (954)
...|| +|++.. +++.||||| .|..|+|..|.+++...... .....|+|+.|+.+..
T Consensus 15 ~~~~C-iC~~~~---~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 15 IKVRC-VCGNSL---ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCCC-SSCCCC---CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CCEEe-ECCCcC---CCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccC
Confidence 34578 898872 446899999 99999999999998864321 1246899999996553
No 57
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.22 E-value=3.8e-07 Score=77.43 Aligned_cols=49 Identities=27% Similarity=0.838 Sum_probs=39.4
Q ss_pred cCCccccccccccCCCCCCeeeCCCCC---ceeeccccccccccccccCCCcccCCcccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCK---VWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~---~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...|| +|++.+. +.||+||.|+ .|+|..|.+++.. +...|+||.|+.+.
T Consensus 10 e~~yC-~C~~~~~----g~MI~CD~c~C~~~WfH~~Cvgl~~~-----p~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 10 EPTYC-LCNQVSY----GEMIGCDNEQCPIEWFHFSCVSLTYK-----PKGKWYCPKCRGDN 61 (62)
T ss_dssp CCEET-TTTEECC----SEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHHHTCC
T ss_pred CCcEE-ECCCCCC----CCeeeeeCCCCCcccEecccCCcCcC-----CCCCEECcCcccCC
Confidence 45688 9998743 4799999955 9999999998764 46789999998653
No 58
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.21 E-value=6.8e-07 Score=81.43 Aligned_cols=50 Identities=26% Similarity=0.889 Sum_probs=40.2
Q ss_pred cCCccccccccccCCCCCCeeeCCC--CC-ceeeccccccccccccccCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDG--CK-VWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~--C~-~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
...|| +|++.+. +.||+||. |. .|||..|.+++.. +...|+||.|+.+..
T Consensus 35 e~~yC-iC~~~~~----g~MI~CD~~dC~~~WfH~~CVgl~~~-----p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 35 EPTYC-LCHQVSY----GEMIGCDNPDCSIEWFHFACVGLTTK-----PRGKWFCPRCSQESG 87 (91)
T ss_dssp CCBCS-TTCCBCC----SCCCCCSCSSCSCCCCCSTTTTCSSC-----CCSSCCCTTTCCCCS
T ss_pred CCcEE-ECCCCCC----CCEeEecCCCCCCCCEecccCCcCcC-----CCCCEECcCccCcCC
Confidence 45688 9988763 47999999 66 7999999998764 457899999986553
No 59
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.19 E-value=5.3e-07 Score=77.32 Aligned_cols=46 Identities=28% Similarity=0.683 Sum_probs=41.0
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCcccc--CccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYG--ARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG--v~~~p~~~~W~C~~C~~ 686 (954)
+++.|.||..+ +.||.||.|..+||..|++ +..+|. +.|+|..|..
T Consensus 7 ~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~ppl~~~P~-g~W~C~~C~~ 54 (66)
T 1xwh_A 7 NEDECAVCRDG-----GELICCDGCPRAFHLACLSPPLREIPS-GTWRCSSCLQ 54 (66)
T ss_dssp CCCSBSSSSCC-----SSCEECSSCCCEECTTTSSSCCSSCCS-SCCCCHHHHH
T ss_pred CCCCCccCCCC-----CCEEEcCCCChhhcccccCCCcCcCCC-CCeECccccC
Confidence 67899999976 5899999999999999999 456787 9999999986
No 60
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.18 E-value=4.6e-07 Score=85.74 Aligned_cols=64 Identities=17% Similarity=0.305 Sum_probs=44.8
Q ss_pred HHhhhcCCccccccccccCCCC-CCeeeCCCCCceeeccccccccccc-cccCCCcccCCcccccc
Q 002201 446 AKLMKSKHFCGICKKVWNHSDG-GSWVRCDGCKVWVHAECDKISSSHF-KDLGGSEYYCPACKAKF 509 (954)
Q Consensus 446 ~~l~~kg~yCpiC~k~y~~~d~-~~~VqCd~C~~WvH~~Cd~~~~~~~-e~~~~~~Y~Cp~Cr~k~ 509 (954)
..+.....+|+.|.+.+...+. ..||+|+.|+.|+|..|.++..+.+ +......|.||.|+.+.
T Consensus 50 ~~~~~~c~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 50 LPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp CCTTCBCTTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ccccccccccCcccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 3333455677777777766554 5699999999999999999876542 22234579999998654
No 61
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.16 E-value=6.5e-07 Score=75.27 Aligned_cols=46 Identities=20% Similarity=0.668 Sum_probs=40.6
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCcccc--CccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYG--ARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG--v~~~p~~~~W~C~~C~~ 686 (954)
+++.|.||+.+ +.||.|+.|..+||+.|++ +..+|. +.|+|..|..
T Consensus 4 ~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~ 51 (60)
T 2puy_A 4 HEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQD 51 (60)
T ss_dssp CCSSCTTTCCC-----SSCEECSSSSCEECGGGSSSCCSSCCC-SCCCCHHHHH
T ss_pred CCCCCcCCCCC-----CcEEEcCCCCcCEECCcCCCCcCCCCC-CceEChhccC
Confidence 57899999985 6899999999999999999 456777 8999999975
No 62
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.15 E-value=6.1e-07 Score=72.87 Aligned_cols=46 Identities=33% Similarity=0.695 Sum_probs=39.2
Q ss_pred cccccCCCccCCCCceEEcCCCCccccCcccc--CccccCCCceeEecccc
Q 002201 638 RCAVCRWVEDWDYNKIIICNRCQIAVHQECYG--ARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG--v~~~p~~~~W~C~~C~~ 686 (954)
.|.||+..+. .+.||.||.|...||..|++ +..+|+ +.|+|..|..
T Consensus 2 ~C~vC~~~~~--~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~-g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGE--DDKLILCDECNKAFHLFCLRPALYEVPD-GEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSC--CSCCEECTTTCCEECHHHHCTTCCSCCS-SCCSCTTTSC
T ss_pred CCCCCCCCCC--CCCEEECCCCChhhCcccCCCCcCCCCC-CcEECcCccc
Confidence 5999998753 46899999999999999995 556787 8999999963
No 63
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=8.1e-07 Score=73.70 Aligned_cols=45 Identities=20% Similarity=0.694 Sum_probs=39.8
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccC--ccccCCCceeEeccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGA--RNVQDFTSWVFEIVY 685 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv--~~~p~~~~W~C~~C~ 685 (954)
+++.|.||+.. +.||.|+.|..+||..|+++ ..+|. +.|+|..|.
T Consensus 8 ~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~-g~W~C~~C~ 54 (56)
T 2yql_A 8 HEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQ 54 (56)
T ss_dssp SCCSCSSSCCS-----SCCEECSSSSCEECSSSSSSCCCSCCC-SSCCCHHHH
T ss_pred CCCCCccCCCC-----CeEEEcCCCCcceECccCCCCcCCCCC-CceEChhhh
Confidence 57889999985 68999999999999999994 56777 899999996
No 64
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.13 E-value=3.9e-07 Score=91.94 Aligned_cols=55 Identities=33% Similarity=0.788 Sum_probs=43.8
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
...|| +|++.|+ +++.|||||.|.+|+|..|.+++....+ ....|+||.|+.+..
T Consensus 7 ~~~~C-~C~~~~~--~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~--~~~~~~C~~C~~~~~ 61 (174)
T 2ri7_A 7 TKLYC-ICKTPED--ESKFYIGCDRCQNWYHGRCVGILQSEAE--LIDEYVCPQCQSTED 61 (174)
T ss_dssp CCEET-TTTEECC--TTSCEEECTTTCCEEEHHHHTCCHHHHT--TCSSCCCHHHHHHHH
T ss_pred CCcEe-eCCCCCC--CCCCEeECCCCCchhChhhcCCchhhcc--CccCeecCCCcchhc
Confidence 56789 9999874 4567999999999999999998765322 356899999997653
No 65
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.13 E-value=7.8e-07 Score=80.85 Aligned_cols=49 Identities=29% Similarity=0.790 Sum_probs=39.2
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCC---ceeeccccccccccccccCCCcccCCc-cccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCK---VWVHAECDKISSSHFKDLGGSEYYCPA-CKAK 508 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~---~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~-Cr~k 508 (954)
+...|| +|++.+. ++||+||.|+ .|+|..|.+++.. +...|+||. |+..
T Consensus 24 ~~~~yC-iC~~~~~----g~MI~CD~c~C~~eWfH~~CVgl~~~-----p~~~W~Cp~cC~~~ 76 (90)
T 2jmi_A 24 QEEVYC-FCRNVSY----GPMVACDNPACPFEWFHYGCVGLKQA-----PKGKWYCSKDCKEI 76 (90)
T ss_dssp CCSCCS-TTTCCCS----SSEECCCSSSCSCSCEETTTSSCSSC-----TTSCCCSSHHHHHH
T ss_pred CCCcEE-EeCCCCC----CCEEEecCCCCccccCcCccCCCCcC-----CCCCccCChhhcch
Confidence 356689 9988643 3699999987 9999999998764 456899999 9843
No 66
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.13 E-value=9.4e-07 Score=76.20 Aligned_cols=52 Identities=27% Similarity=0.694 Sum_probs=38.4
Q ss_pred CccccccccccCCCCCCeeeCCC--CCceeecccccccccccccc-CCCcccCCccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDG--CKVWVHAECDKISSSHFKDL-GGSEYYCPACKAK 508 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~--C~~WvH~~Cd~~~~~~~e~~-~~~~Y~Cp~Cr~k 508 (954)
.|| +|++. .+.+.||+||. |+.|+|..|.+++....+.. ....|+|+.||.+
T Consensus 11 v~C-~C~~~---~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 11 VRC-ICSST---MVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp ECC-TTCCC---SCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred EEe-ECCCC---cCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 457 78763 34467999995 99999999999987643322 2357999999854
No 67
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.13 E-value=1.3e-06 Score=79.07 Aligned_cols=47 Identities=21% Similarity=0.662 Sum_probs=41.5
Q ss_pred CCCCcccccCCCccCCCCceEEcCCCCccccCccc--cCccccCCCceeEecccc
Q 002201 634 WTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECY--GARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 634 ~~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~Cy--Gv~~~p~~~~W~C~~C~~ 686 (954)
.+++.|.||+.+ +.||.||.|..+||..|+ ++..+|+ +.|+|..|..
T Consensus 23 ~n~~~C~vC~~~-----g~LL~CD~C~~~fH~~Cl~PpL~~~P~-g~W~C~~C~~ 71 (88)
T 1fp0_A 23 DSATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQDVPG-EEWSCSLCHV 71 (88)
T ss_dssp SSSSCCSSSCSS-----SCCEECTTSSCEECTTSSSTTCCCCCS-SSCCCCSCCC
T ss_pred CCCCcCcCcCCC-----CCEEECCCCCCceecccCCCCCCCCcC-CCcCCccccC
Confidence 367899999986 579999999999999999 5567788 9999999985
No 68
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.12 E-value=7.9e-07 Score=74.92 Aligned_cols=48 Identities=27% Similarity=0.943 Sum_probs=38.1
Q ss_pred cCCccccccccccCCCCCCeeeCCC--CC-ceeeccccccccccccccCCCcccCCccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDG--CK-VWVHAECDKISSSHFKDLGGSEYYCPACKAK 508 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~--C~-~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k 508 (954)
...|| +|++.+. +.||+||+ |. .|+|..|.+++.. +...|+||.|+.+
T Consensus 9 e~~~C-~C~~~~~----g~mi~CD~cdC~~~wfH~~Cvgl~~~-----p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 9 EPTYC-LCHQVSY----GEMIGCDNPDCSIEWFHFACVGLTTK-----PRGKWFCPRCSQE 59 (60)
T ss_dssp CCEET-TTTEECC----SEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHHHC-
T ss_pred CCCEE-ECCCcCC----CCEEEeCCCCCCCceEehhcCCCCcC-----CCCCEECcCccCc
Confidence 45688 8998752 57999999 55 8999999997764 5578999999864
No 69
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.09 E-value=1e-06 Score=75.68 Aligned_cols=46 Identities=22% Similarity=0.382 Sum_probs=39.4
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCc--cccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGAR--NVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~--~~p~~~~W~C~~C~~ 686 (954)
....|.||+++ +.||.|+.|..+||+.|+.++ .+|+ +.|+|..|..
T Consensus 11 ~~~~C~vC~~~-----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~-g~W~C~~C~~ 58 (66)
T 2lri_C 11 PGARCGVCGDG-----TDVLRCTHCAAAFHWRCHFPAGTSRPG-TGLRCRSCSG 58 (66)
T ss_dssp TTCCCTTTSCC-----TTCEECSSSCCEECHHHHCTTTCCCCS-SSCCCTTTTT
T ss_pred CCCCcCCCCCC-----CeEEECCCCCCceecccCCCccCcCCC-CCEECccccC
Confidence 45679999875 579999999999999999654 6777 8999999974
No 70
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.09 E-value=1e-06 Score=81.28 Aligned_cols=46 Identities=35% Similarity=0.876 Sum_probs=35.6
Q ss_pred cccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 457 ICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 457 iC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
||++.+ +++.||+||.|++|+|..|.++.... .+ ..|+||.|+.+.
T Consensus 32 iC~~~~---~~~~mi~Cd~C~~w~H~~C~~~~~~~---~p-~~w~C~~C~~~~ 77 (98)
T 2lv9_A 32 ICGFTH---DDGYMICCDKCSVWQHIDCMGIDRQH---IP-DTYLCERCQPRN 77 (98)
T ss_dssp TTSCCS---CSSCEEEBTTTCBEEETTTTTCCTTS---CC-SSBCCTTTSSSC
T ss_pred ECCCcc---CCCcEEEcCCCCCcCcCcCCCCCccC---CC-CCEECCCCcCCC
Confidence 666543 34679999999999999999887542 23 379999998654
No 71
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.04 E-value=1.6e-06 Score=73.28 Aligned_cols=46 Identities=24% Similarity=0.601 Sum_probs=40.6
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCc--cccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGAR--NVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~--~~p~~~~W~C~~C~~ 686 (954)
.++.|.||+.+ +.||.|+.|..+||..|++++ .+|+ +.|+|..|..
T Consensus 10 ~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~p~l~~~p~-g~W~C~~C~~ 57 (61)
T 2l5u_A 10 HQDYCEVCQQG-----GEIILCDTCPRAYHMVCLDPDMEKAPE-GKWSCPHCEK 57 (61)
T ss_dssp CCSSCTTTSCC-----SSEEECSSSSCEEEHHHHCTTCCSCCC-SSCCCTTGGG
T ss_pred CCCCCccCCCC-----CcEEECCCCChhhhhhccCCCCCCCCC-CceECccccc
Confidence 56789999985 689999999999999999985 5677 9999999974
No 72
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.97 E-value=1.9e-06 Score=78.65 Aligned_cols=49 Identities=18% Similarity=0.441 Sum_probs=42.2
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCcccc--CccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYG--ARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG--v~~~p~~~~W~C~~C~~ 686 (954)
++..|.||...+. .+.||.||.|...||..|++ +..+|. +.|+|..|..
T Consensus 15 ~~~~C~vC~~~~~--~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~-g~W~C~~C~~ 65 (92)
T 2e6r_A 15 DSYICQVCSRGDE--DDKLLFCDGCDDNYHIFCLLPPLPEIPR-GIWRCPKCIL 65 (92)
T ss_dssp CCCCCSSSCCSGG--GGGCEECTTTCCEECSSSSSSCCSSCCS-SCCCCHHHHH
T ss_pred CCCCCccCCCcCC--CCCEEEcCCCCchhccccCCCCcccCCC-CCcCCccCcC
Confidence 4678999998753 46899999999999999999 456787 9999999986
No 73
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.93 E-value=2.3e-06 Score=74.33 Aligned_cols=49 Identities=35% Similarity=0.868 Sum_probs=39.3
Q ss_pred cCCccccccccccCCCCCCeeeCCCCC---ceeeccccccccccccccCCCcccCCcccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCK---VWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~---~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...|| +|.++. .+.||+||.|+ .|+|..|.+++.. +...|+||.|+.+.
T Consensus 5 ~~~yC-~C~~~~----~g~MI~CD~cdC~~~WfH~~Cvgl~~~-----p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 5 SSGYC-ICNQVS----YGEMVGCDNQDCPIEWFHYGCVGLTEA-----PKGKWYCPQCTAAM 56 (70)
T ss_dssp CCCCS-TTSCCC----CSSEECCSCTTCSCCCEEHHHHTCSSC-----CSSCCCCHHHHHHH
T ss_pred CCeEE-EcCCCC----CCCEeEeCCCCCCccCCcccccccCcC-----CCCCEECCCCCccc
Confidence 45688 698863 23799999986 8999999998774 46789999998654
No 74
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.89 E-value=2.6e-06 Score=99.01 Aligned_cols=62 Identities=26% Similarity=0.665 Sum_probs=47.6
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccccccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNFELSDSER 518 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~~~~~~~~ 518 (954)
..|| +|++.|+ ++..|||||.|+.|+|..|.+++....+ ....|+|+.|+.+....+..+++
T Consensus 37 ~~yC-~C~~~~d--~~~~MIqCd~C~~WfH~~Cvgl~~~~~~--~~~~~~C~~C~~~~~~~~~k~~~ 98 (488)
T 3kv5_D 37 PVYC-VCRQPYD--VNRFMIECDICKDWFHGSCVGVEEHHAV--DIDLYHCPNCAVLHGSSLMKKRR 98 (488)
T ss_dssp CEET-TTTEECC--TTSCEEEBTTTCCEEEHHHHTCCGGGGG--GEEEBCCHHHHHHHCSCEECCCC
T ss_pred CeEE-eCCCcCC--CCCCeEEccCCCCceeeeecCcCccccc--CCCEEECCCCcCCcCcchhcccc
Confidence 4567 9998874 3567999999999999999999886432 12579999999887766554443
No 75
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.86 E-value=8e-06 Score=72.19 Aligned_cols=48 Identities=25% Similarity=0.564 Sum_probs=40.0
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCcccc--CccccCCC-ceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYG--ARNVQDFT-SWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG--v~~~p~~~-~W~C~~C~~ 686 (954)
+..|.||+..+ +.+.||.||.|..+||+.|++ +..+|+ + .|+|..|..
T Consensus 26 ~c~C~vC~~~~--~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~-g~~W~C~~C~~ 76 (77)
T 2e6s_A 26 SCSCRVCGGKH--EPNMQLLCDECNVAYHIYCLNPPLDKVPE-EEYWYCPSCKT 76 (77)
T ss_dssp SSSCSSSCCCC--CSTTEEECSSSCCEEETTSSSSCCSSCCC-SSCCCCTTTCC
T ss_pred CCCCcCcCCcC--CCCCEEEcCCCCccccccccCCCccCCCC-CCCcCCcCccC
Confidence 45789998754 347999999999999999999 456787 7 999999963
No 76
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=97.82 E-value=2.3e-06 Score=98.30 Aligned_cols=61 Identities=21% Similarity=0.622 Sum_probs=46.1
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccccccccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNFELSDSER 518 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~~~~~~~~ 518 (954)
.|| +|++.|+ ++..|||||.|+.|+|..|.+++....+ ....|+||.|+.+....+...+.
T Consensus 6 ~yC-iC~~~~d--~~~~MIqCD~C~~WfH~~CVgi~~~~~~--~~~~y~C~~C~~~~~~~~~k~~~ 66 (447)
T 3kv4_A 6 VYC-LCRLPYD--VTRFMIECDMCQDWFHGSCVGVEEEKAA--DIDLYHCPNCEVLHGPSIMKKRR 66 (447)
T ss_dssp EET-TTTEECC--TTSCEEECTTTCCEEEHHHHTCCHHHHT--TEEECCCHHHHHHHCCCEECC--
T ss_pred eEE-eCCCcCC--CCCCeEEcCCCCcccccccCCcCccccc--CCCEEECCCCccccCCchhcccc
Confidence 466 9999883 3578999999999999999999876332 22579999999877766544433
No 77
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.82 E-value=1.3e-05 Score=92.86 Aligned_cols=92 Identities=18% Similarity=0.444 Sum_probs=52.4
Q ss_pred CCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCccccccccccCCCCCCeeeCCCCCceeeccccccccc
Q 002201 411 KDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSS 490 (954)
Q Consensus 411 k~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~ 490 (954)
|.--+|..||....-. +.. -+-=..|..+-+....+.-+... ++.+..||+||.|+.|+|..|++++..
T Consensus 10 ~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~~~~~s~kk~~~~--~n~~~~mI~CD~C~~WfH~~CVgi~~~ 78 (528)
T 3pur_A 10 KESDRCGGCGKFTHED---DLI------ALEEEKKKEKEKPLMSKKKSHHH--KKNDFQWIGCDSCQTWYHFLCSGLEQF 78 (528)
T ss_dssp CCSCCCTTTCCCC----------------------------CCSCCCTTTT--TTSTTSEEECTTTCCEEEGGGTTCCGG
T ss_pred CccchhhcccCCCchh---hHH------HHHHHhhhhhhhccccccccccC--CCcCCCEEECCCCCcCCCCcCCCCChh
Confidence 4556789999876542 111 11112343333333333333322 334578999999999999999999986
Q ss_pred cccccCCCcccCCcccccccccccc
Q 002201 491 HFKDLGGSEYYCPACKAKFNFELSD 515 (954)
Q Consensus 491 ~~e~~~~~~Y~Cp~Cr~k~~~~~~~ 515 (954)
..+ ....|+||.|+......+..
T Consensus 79 ~a~--~~~~y~Cp~C~~~~gps~~k 101 (528)
T 3pur_A 79 EYY--LYEKFFCPKCVPHTGHSIRY 101 (528)
T ss_dssp GTT--TEEECCCTTTHHHHCSCEEC
T ss_pred Hhc--CCCeEECcCCcCCCCCccee
Confidence 443 23679999999876666543
No 78
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=97.78 E-value=1e-05 Score=82.49 Aligned_cols=46 Identities=22% Similarity=0.617 Sum_probs=40.1
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCc--cccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGAR--NVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~--~~p~~~~W~C~~C~~ 686 (954)
+++.|.||+.+ +.||+||+|..+||..|++++ .+|+ +.|+|..|..
T Consensus 3 ~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~C~~p~l~~~p~-~~W~C~~C~~ 50 (184)
T 3o36_A 3 NEDWCAVCQNG-----GELLCCEKCPKVFHLSCHVPTLTNFPS-GEWICTFCRD 50 (184)
T ss_dssp SCSSCTTTCCC-----SSCEECSSSSCEECTTTSSSCCSSCCS-SCCCCTTTSC
T ss_pred CCCccccCCCC-----CeeeecCCCCcccCccccCCCCCCCCC-CCEECccccC
Confidence 67899999976 579999999999999999654 5677 8999999975
No 79
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.76 E-value=9.5e-06 Score=70.42 Aligned_cols=46 Identities=24% Similarity=0.610 Sum_probs=38.2
Q ss_pred cccccCCCccCCCCceEEcCCCCccccCcccc--CccccCCC-ceeEecccc
Q 002201 638 RCAVCRWVEDWDYNKIIICNRCQIAVHQECYG--ARNVQDFT-SWVFEIVYT 686 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG--v~~~p~~~-~W~C~~C~~ 686 (954)
.|.||+..+ +.+.||.||.|..+||+.|++ +..+|+ + .|+|..|..
T Consensus 20 ~C~~C~~~~--~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~-g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPS-EDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCS--CGGGEEECTTTCCEEEGGGSSSCCSSCCS-SSCCCCTTTSC
T ss_pred CCcCCCCcC--CCCCEEEcCCCCCceecccCCCCcCCCCC-CCCcCCcCccC
Confidence 577888653 347999999999999999999 556787 7 999999963
No 80
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=97.73 E-value=1.9e-05 Score=79.83 Aligned_cols=45 Identities=22% Similarity=0.398 Sum_probs=37.5
Q ss_pred ccCCceEEEecCcc--CceeeeccccCCCCeEEEecceecCHHHHHH
Q 002201 895 TEHDRVCFGRSGIH--GWGLFARRNIQEGEMVLEYRGEQVRRSIADL 939 (954)
Q Consensus 895 ~~~~~~~v~~S~ih--G~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~ 939 (954)
+.-+.|.|++|.|+ |+||||+++|++|++++||+||+|+.++|+.
T Consensus 24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~ 70 (170)
T 3ep0_A 24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDI 70 (170)
T ss_dssp SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC-----
T ss_pred CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhcc
Confidence 45678999999999 7999999999999999999999999988864
No 81
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=97.71 E-value=8.9e-06 Score=87.85 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=32.8
Q ss_pred EecCccCceeeeccccCCCCeEEEecceecCHHHHHHH
Q 002201 903 GRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLR 940 (954)
Q Consensus 903 ~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~R 940 (954)
+++..|||||||+++|++|+||+||+||+|+..+++.+
T Consensus 141 y~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~ 178 (273)
T 3s8p_A 141 YSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEEN 178 (273)
T ss_dssp CTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHH
T ss_pred eeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHH
Confidence 34556999999999999999999999999987777654
No 82
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.71 E-value=1.3e-05 Score=83.14 Aligned_cols=47 Identities=19% Similarity=0.543 Sum_probs=40.8
Q ss_pred CCCCcccccCCCccCCCCceEEcCCCCccccCccccCc--cccCCCceeEecccc
Q 002201 634 WTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGAR--NVQDFTSWVFEIVYT 686 (954)
Q Consensus 634 ~~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~--~~p~~~~W~C~~C~~ 686 (954)
.+++.|.||+.+ +.||+||+|..+||..|++++ .+|. +.|+|..|..
T Consensus 5 ~~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~-~~W~C~~C~~ 53 (207)
T 3u5n_A 5 PNEDWCAVCQNG-----GDLLCCEKCPKVFHLTCHVPTLLSFPS-GDWICTFCRD 53 (207)
T ss_dssp SSCSSBTTTCCC-----EEEEECSSSSCEECTTTSSSCCSSCCS-SCCCCTTTSC
T ss_pred CCCCCCCCCCCC-----CceEEcCCCCCccCCccCCCCCCCCCC-CCEEeCceeC
Confidence 367899999976 579999999999999999654 5777 8999999986
No 83
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.68 E-value=1.5e-05 Score=70.53 Aligned_cols=46 Identities=24% Similarity=0.623 Sum_probs=37.4
Q ss_pred cccccCCCccCCCCceEEcCCCCccccCccccC--ccccCCCc-eeEecccc
Q 002201 638 RCAVCRWVEDWDYNKIIICNRCQIAVHQECYGA--RNVQDFTS-WVFEIVYT 686 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv--~~~p~~~~-W~C~~C~~ 686 (954)
.|.||+..+ +.+.||.|+.|..+||..|+++ ..+|+ +. |+|..|++
T Consensus 28 ~C~vC~~~~--d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~-g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPS-EDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCS--CGGGEEECTTTCCEEETTTSSSCCSSCCS-SSCCCCTTTC-
T ss_pred cCCccCCCC--CCcceeEeCCCCCccCcccCCCcccCCCC-CCceECcCccc
Confidence 577887754 3468999999999999999994 46788 66 99999974
No 84
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.62 E-value=3.1e-05 Score=62.70 Aligned_cols=49 Identities=27% Similarity=0.661 Sum_probs=37.9
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAK 508 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k 508 (954)
+|.+|++.- +..+||.||.|++|+|..|..+.-. ..+..+++|+.|+..
T Consensus 2 ~C~vC~~~~---~~~~ll~Cd~C~~~~H~~Cl~p~l~---~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKG---EDDKLILCDECNKAFHLFCLRPALY---EVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSS---CCSCCEECTTTCCEECHHHHCTTCC---SCCSSCCSCTTTSCC
T ss_pred CCCCCCCCC---CCCCEEECCCCChhhCcccCCCCcC---CCCCCcEECcCcccc
Confidence 478887643 3467999999999999999865432 346679999999853
No 85
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=97.61 E-value=1.5e-05 Score=81.82 Aligned_cols=45 Identities=22% Similarity=0.682 Sum_probs=39.4
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCcccc--CccccCCCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYG--ARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG--v~~~p~~~~W~C~~C~~ 686 (954)
++.|.||+.+ +.||.|++|..+||..|+. +..+|. +.|+|..|..
T Consensus 2 ~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~-g~W~C~~C~~ 48 (189)
T 2ro1_A 2 ATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQDVPG-EEWSCSLCHV 48 (189)
T ss_dssp CCCBTTTCCC-----SSCCCCTTTCCBCCSTTSTTCCSSCCC-TTCCTTTTSC
T ss_pred CCcCccCCCC-----CceeECCCCCchhccccCCCCcccCCC-CCCCCcCccC
Confidence 5789999976 5799999999999999995 556787 9999999975
No 86
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.39 E-value=9.8e-05 Score=62.26 Aligned_cols=48 Identities=25% Similarity=0.748 Sum_probs=38.2
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAK 508 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k 508 (954)
..+|.+|++ +.+||.||.|.+|+|..|.++... ..+...++|+.|+.+
T Consensus 11 ~~~C~vC~~------~g~ll~CD~C~~~fH~~Cl~p~l~---~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 11 QDYCEVCQQ------GGEIILCDTCPRAYHMVCLDPDME---KAPEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCTTTSC------CSSEEECSSSSCEEEHHHHCTTCC---SCCCSSCCCTTGGGG
T ss_pred CCCCccCCC------CCcEEECCCCChhhhhhccCCCCC---CCCCCceECcccccc
Confidence 457888865 357999999999999999987543 346789999999854
No 87
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.34 E-value=4.3e-05 Score=66.77 Aligned_cols=49 Identities=20% Similarity=0.354 Sum_probs=40.3
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccCccccC-CCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQD-FTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~-~~~W~C~~C~~ 686 (954)
...|.||+... +.+.||.||.|...||..|+|++..+. .+.|+|..|..
T Consensus 18 ~~~C~~C~~~~--~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 18 IWICPGCNKPD--DGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 67 (75)
T ss_dssp EECBTTTTBCC--SSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHH
T ss_pred CcCCCCCCCCC--CCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccC
Confidence 45799999874 335799999999999999999986542 27899999975
No 88
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.32 E-value=0.00012 Score=60.51 Aligned_cols=47 Identities=28% Similarity=0.801 Sum_probs=36.8
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKA 507 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~ 507 (954)
..+|.+|++ ..+||.||.|.+|+|..|..+.-. ..+...++|+.|..
T Consensus 9 ~~~C~vC~~------~g~ll~Cd~C~~~~H~~Cl~ppl~---~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRK------SGQLLMCDTCSRVYHLDCLDPPLK---TIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCC------SSCCEECSSSSCEECSSSSSSCCC---SCCCSSCCCHHHHC
T ss_pred CCCCccCCC------CCeEEEcCCCCcceECccCCCCcC---CCCCCceEChhhhC
Confidence 346778865 247999999999999999975433 34677999999974
No 89
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.32 E-value=0.00013 Score=67.33 Aligned_cols=47 Identities=23% Similarity=0.622 Sum_probs=37.7
Q ss_pred CcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 637 ERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 637 ~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
..| ||+..+ +++.||.|+.|...||..|+|++.......|+|..|..
T Consensus 29 vrC-iC~~~~--~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 29 TRC-ICGFTH--DDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CCC-TTSCCS--CSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred EEe-ECCCcc--CCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 456 898764 34789999999999999999997543335799999974
No 90
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.30 E-value=6.4e-05 Score=63.08 Aligned_cols=45 Identities=20% Similarity=0.484 Sum_probs=37.9
Q ss_pred cccccCCCccCCCCceEEcCC--CC-ccccCccccCccccCCCceeEecccc
Q 002201 638 RCAVCRWVEDWDYNKIIICNR--CQ-IAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~--C~-~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
...+|+... ++.||.||+ |. ..||..|+|+...|. +.|+|..|..
T Consensus 10 ~yC~C~~~~---~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~-~~w~Cp~C~~ 57 (59)
T 3c6w_A 10 TYCLCHQVS---YGEMIGCDNPDCPIEWFHFACVDLTTKPK-GKWFCPRCVQ 57 (59)
T ss_dssp EETTTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCS-SCCCCHHHHC
T ss_pred cEEECCCCC---CCCeeEeeCCCCCCCCEecccCCcccCCC-CCEECcCccC
Confidence 344999864 368999999 87 599999999999998 8999999963
No 91
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.29 E-value=6.6e-05 Score=63.18 Aligned_cols=45 Identities=22% Similarity=0.523 Sum_probs=37.7
Q ss_pred cccccCCCccCCCCceEEcCC--CC-ccccCccccCccccCCCceeEecccc
Q 002201 638 RCAVCRWVEDWDYNKIIICNR--CQ-IAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~--C~-~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
...||+... ++.||.||+ |. ..||..|+|+..+|. +.|+|..|..
T Consensus 11 ~~C~C~~~~---~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~-g~w~C~~C~~ 58 (60)
T 2vnf_A 11 TYCLCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQ 58 (60)
T ss_dssp EETTTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCS-SCCCCHHHHC
T ss_pred CEEECCCcC---CCCEEEeCCCCCCCceEehhcCCCCcCCC-CCEECcCccC
Confidence 344999864 268999999 66 689999999999998 9999999963
No 92
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=97.28 E-value=0.00015 Score=62.04 Aligned_cols=50 Identities=24% Similarity=0.697 Sum_probs=39.1
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...+|.+|+. +++||.||.|.+|+|..|.++... ..+...++|+.|..+.
T Consensus 7 ~~~~C~vC~~------~g~ll~CD~C~~~fH~~Cl~ppl~---~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 7 NEDECAVCRD------GGELICCDGCPRAFHLACLSPPLR---EIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCCSBSSSSC------CSSCEECSSCCCEECTTTSSSCCS---SCCSSCCCCHHHHHTC
T ss_pred CCCCCccCCC------CCCEEEcCCCChhhcccccCCCcC---cCCCCCeECccccCcc
Confidence 3457888874 357999999999999999985433 3466899999998654
No 93
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.26 E-value=0.00032 Score=61.94 Aligned_cols=64 Identities=23% Similarity=0.562 Sum_probs=43.3
Q ss_pred ccccccccHHhhh---cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCC-cccCCcccc
Q 002201 438 DQLFCRTCAKLMK---SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGS-EYYCPACKA 507 (954)
Q Consensus 438 ~~~lC~~C~~l~~---kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~-~Y~Cp~Cr~ 507 (954)
+...|..|.+... ..-.|.+|++ .+++..||.||.|++++|..|.++.-. ..+.. .++||.|..
T Consensus 9 ~~~~c~~C~~~~~w~C~~c~C~vC~~---~~~~~~ll~CD~C~~~yH~~Cl~Ppl~---~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 9 NDTECDLCGGDPEKKCHSCSCRVCGG---KHEPNMQLLCDECNVAYHIYCLNPPLD---KVPEEEYWYCPSCKT 76 (77)
T ss_dssp CCCCCTTTCSCSSSCCSSSSCSSSCC---CCCSTTEEECSSSCCEEETTSSSSCCS---SCCCSSCCCCTTTCC
T ss_pred CCccChhhcCCCCeECCCCCCcCcCC---cCCCCCEEEcCCCCccccccccCCCcc---CCCCCCCcCCcCccC
Confidence 4555555543221 1114667765 345678999999999999999875432 34566 899999974
No 94
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.26 E-value=0.00012 Score=76.84 Aligned_cols=48 Identities=23% Similarity=0.574 Sum_probs=36.5
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccC--ccccCCC-ceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGA--RNVQDFT-SWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv--~~~p~~~-~W~C~~C~~ 686 (954)
+..|.+|+..+ +.+.||.||.|..+||..|+++ ..+|. + .|+|..|..
T Consensus 174 ~c~C~vC~~~~--~~~~lL~CD~C~~~yH~~CL~PPL~~vP~-G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPS-EDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCC--C--CCEECSSSCCEECSCC--CCCCSCCS-SSCCCCGGGC-
T ss_pred CCCCcCCCCCC--CCCCeEEcCCCCcceeCccCCCCcccCCC-CCCCCCcCCcC
Confidence 45799998854 3479999999999999999995 46787 7 999999963
No 95
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.26 E-value=9.2e-05 Score=64.43 Aligned_cols=53 Identities=23% Similarity=0.545 Sum_probs=41.4
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...+|.+|++... .+...||.||.|++|+|..|.++.. .+..+++|+.|+.+.
T Consensus 15 ~~~~C~vC~~~~s-~~~~~ll~CD~C~~~~H~~Cl~~~~-----vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 15 EDAVCSICMDGES-QNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHCLQSR 67 (71)
T ss_dssp SSCSCSSSCCCCC-CSSSCEEECSSSCCEEEHHHHTCSS-----CCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCC-CCCCCEEECCCCCCccccccCCCCc-----CCCCCcCCccCcCcC
Confidence 3457888887542 2346899999999999999998864 367899999998654
No 96
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.24 E-value=0.00014 Score=61.03 Aligned_cols=49 Identities=27% Similarity=0.790 Sum_probs=38.8
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
..+|.+|++ +++||.||.|.+|+|..|.++.-. ..+...++|+.|..+.
T Consensus 5 ~~~C~vC~~------~g~ll~Cd~C~~~fH~~Cl~ppl~---~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 5 EDFCSVCRK------SGQLLMCDTCSRVYHLDCLDPPLK---TIPKGMWICPRCQDQM 53 (60)
T ss_dssp CSSCTTTCC------CSSCEECSSSSCEECGGGSSSCCS---SCCCSCCCCHHHHHHH
T ss_pred CCCCcCCCC------CCcEEEcCCCCcCEECCcCCCCcC---CCCCCceEChhccChh
Confidence 457888875 357999999999999999985433 3466799999998544
No 97
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.24 E-value=9.8e-05 Score=67.11 Aligned_cols=46 Identities=20% Similarity=0.440 Sum_probs=38.7
Q ss_pred CCcccccCCCccCCCCceEEcCCCC---ccccCccccCccccCCCceeEec-ccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQ---IAVHQECYGARNVQDFTSWVFEI-VYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~---~avH~~CyGv~~~p~~~~W~C~~-C~~ 686 (954)
...| ||+.... +.||.||.|. .-||..|+|+...|. +.|+|.. |..
T Consensus 26 ~~yC-iC~~~~~---g~MI~CD~c~C~~eWfH~~CVgl~~~p~-~~W~Cp~cC~~ 75 (90)
T 2jmi_A 26 EVYC-FCRNVSY---GPMVACDNPACPFEWFHYGCVGLKQAPK-GKWYCSKDCKE 75 (90)
T ss_dssp SCCS-TTTCCCS---SSEECCCSSSCSCSCEETTTSSCSSCTT-SCCCSSHHHHH
T ss_pred CcEE-EeCCCCC---CCEEEecCCCCccccCcCccCCCCcCCC-CCccCChhhcc
Confidence 3456 9997532 5799999966 789999999999988 9999999 975
No 98
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=97.23 E-value=7.9e-05 Score=76.89 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=42.3
Q ss_pred hcccccCCceEEEecCc--cCceeeeccccCCCCeEEEecceecCHHHHHH
Q 002201 891 TFRRTEHDRVCFGRSGI--HGWGLFARRNIQEGEMVLEYRGEQVRRSIADL 939 (954)
Q Consensus 891 ~~~~~~~~~~~v~~S~i--hG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~ 939 (954)
+-+.+.-..|.|++|.| +|+||||+++|++|+++++|+||+++.++++.
T Consensus 51 RA~~SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~ 101 (196)
T 3dal_A 51 QAEASLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPK 101 (196)
T ss_dssp HHHHTCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC-
T ss_pred hHHhcCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhh
Confidence 33356677899999999 89999999999999999999999999887654
No 99
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=97.21 E-value=0.00023 Score=59.95 Aligned_cols=49 Identities=31% Similarity=0.801 Sum_probs=38.4
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
..+|.+|+. +.+||.||.|.+++|..|..+.-. ..+...++|+.|..+.
T Consensus 9 ~~~C~vC~~------~g~ll~Cd~C~~~fH~~Cl~ppl~---~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 9 MEFCRVCKD------GGELLCCDTCPSSYHIHCLNPPLP---EIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCTTTCC------CSSCBCCSSSCCCBCSSSSSSCCS---SCCSSCCCCTTTTTTC
T ss_pred CCcCCCCCC------CCCEEEcCCCCHHHcccccCCCcC---cCCCCccCChhhcCch
Confidence 456778863 457999999999999999975433 3467899999998654
No 100
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=97.20 E-value=0.00022 Score=61.15 Aligned_cols=47 Identities=28% Similarity=0.704 Sum_probs=36.6
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
.|.+|+ ++.+||.||.|++++|..|..+.-. ..+..+++|+.|+...
T Consensus 14 ~C~vC~------~~~~ll~Cd~C~~~~H~~Cl~P~l~---~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 14 RCGVCG------DGTDVLRCTHCAAAFHWRCHFPAGT---SRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CCTTTS------CCTTCEECSSSCCEECHHHHCTTTC---CCCSSSCCCTTTTTCC
T ss_pred CcCCCC------CCCeEEECCCCCCceecccCCCccC---cCCCCCEECccccCCC
Confidence 467775 3457999999999999999865433 4567889999998654
No 101
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.20 E-value=0.00019 Score=62.38 Aligned_cols=46 Identities=22% Similarity=0.507 Sum_probs=39.1
Q ss_pred CCcccccCCCccCCCCceEEcCC--CC-ccccCccccCccccCCCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNR--CQ-IAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~--C~-~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
...| +|+.... +.||.||. |. ..||..|+|+..+|. +.|+|..|..
T Consensus 16 ~~~C-~C~~~~~---g~MI~CD~~~C~~~wfH~~Cvgl~~~p~-g~w~Cp~C~~ 64 (71)
T 1wen_A 16 PTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQ 64 (71)
T ss_dssp CCCS-TTCCCSC---SSEECCSCSSCSCCCEETTTTTCSSCCS-SCCCCTTTSS
T ss_pred CCEE-ECCCCCC---CCEeEeeCCCCCCccEecccCCcCcCCC-CCEECCCCCc
Confidence 4566 8998642 68999999 87 599999999999988 8999999975
No 102
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.16 E-value=0.00016 Score=61.61 Aligned_cols=57 Identities=19% Similarity=0.400 Sum_probs=41.9
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
..+|.+|+..+.. +...||.||.|++++|..|.++.-......+...++|+.|..+.
T Consensus 6 ~~~C~vC~~~~~~-~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 6 SGVCTICQEEYSE-APNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCBSSSCCCCCB-TTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCC-CCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 4578899876532 34689999999999999999875431111266789999998654
No 103
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.01 E-value=0.00023 Score=64.92 Aligned_cols=50 Identities=22% Similarity=0.524 Sum_probs=38.4
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAK 508 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k 508 (954)
.+|.+|++.. +...||.||.|++|+|..|.++.-. ..+...++||.|...
T Consensus 17 ~~C~vC~~~~---~~~~ll~CD~C~~~~H~~Cl~Ppl~---~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 17 YICQVCSRGD---EDDKLLFCDGCDDNYHIFCLLPPLP---EIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCSSSCCSG---GGGGCEECTTTCCEECSSSSSSCCS---SCCSSCCCCHHHHHH
T ss_pred CCCccCCCcC---CCCCEEEcCCCCchhccccCCCCcc---cCCCCCcCCccCcCc
Confidence 4577887643 2356999999999999999975433 446789999999854
No 104
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.00 E-value=0.00058 Score=59.16 Aligned_cols=48 Identities=29% Similarity=0.731 Sum_probs=37.1
Q ss_pred cccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCC-cccCCccccc
Q 002201 455 CGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGS-EYYCPACKAK 508 (954)
Q Consensus 455 CpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~-~Y~Cp~Cr~k 508 (954)
|.+|++. ++++.||.||.|++++|..|.++.-. ..+.. .++||.|+.+
T Consensus 21 C~~C~~~---~~~~~ll~CD~C~~~yH~~Cl~Ppl~---~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 21 CHLCGGR---QDPDKQLMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRND 69 (70)
T ss_dssp BTTTCCC---SCGGGEEECTTTCCEEEGGGSSSCCS---SCCSSSCCCCTTTSCC
T ss_pred CcCCCCc---CCCCCEEEcCCCCCceecccCCCCcC---CCCCCCCcCCcCccCc
Confidence 6677653 45678999999999999999875433 34566 8999999854
No 105
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.00 E-value=0.00019 Score=60.83 Aligned_cols=45 Identities=22% Similarity=0.524 Sum_probs=37.8
Q ss_pred CcccccCCCccCCCCceEEcCC--CC-ccccCccccCccccCCCceeEecccc
Q 002201 637 ERCAVCRWVEDWDYNKIIICNR--CQ-IAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 637 ~~C~VC~~~e~~~~~~Li~C~~--C~-~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
..| +|+... ++.||.||. |. ..||..|+|+...|. +.|+|..|..
T Consensus 12 ~yC-~C~~~~---~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~-~~w~Cp~C~~ 59 (62)
T 2g6q_A 12 TYC-LCNQVS---YGEMIGCDNEQCPIEWFHFSCVSLTYKPK-GKWYCPKCRG 59 (62)
T ss_dssp EET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCS-SCCCCHHHHT
T ss_pred cEE-ECCCCC---CCCeeeeeCCCCCcccEecccCCcCcCCC-CCEECcCccc
Confidence 345 999863 268999999 65 899999999999887 9999999964
No 106
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.00 E-value=0.0002 Score=68.21 Aligned_cols=42 Identities=29% Similarity=0.854 Sum_probs=33.5
Q ss_pred CeeeCCCCCceeecccccccccccc---ccC-CCcccCCccccccc
Q 002201 469 SWVRCDGCKVWVHAECDKISSSHFK---DLG-GSEYYCPACKAKFN 510 (954)
Q Consensus 469 ~~VqCd~C~~WvH~~Cd~~~~~~~e---~~~-~~~Y~Cp~Cr~k~~ 510 (954)
.||+||.|+.|+|..|.+++.+..+ .++ ...|.||.|..+..
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~ 46 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHV 46 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSC
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccccc
Confidence 4999999999999999999886432 333 46799999986553
No 107
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.92 E-value=0.00021 Score=70.07 Aligned_cols=46 Identities=22% Similarity=0.462 Sum_probs=39.9
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCcc---------ccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARN---------VQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~---------~p~~~~W~C~~C~~ 686 (954)
.++.|.||.++ +.||.||.|..+||..|+.++. .|+ +.|.|..|..
T Consensus 62 ~~d~C~vC~~G-----G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~-~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRKELSTIMDEN-NQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCC-----SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTST-TCCCCTTTCC
T ss_pred CCCeecccCCC-----CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCC-CCCEeecccC
Confidence 57899999998 6899999999999999998653 255 8999999974
No 108
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=96.91 E-value=0.00015 Score=77.43 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=30.7
Q ss_pred cCccCceeeeccccCCCCeEEEecceecCHHHHHH
Q 002201 905 SGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADL 939 (954)
Q Consensus 905 S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~ 939 (954)
+..|||||||+++|++|+||+||+|+++...+++.
T Consensus 115 ~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~ 149 (247)
T 3rq4_A 115 METNGAKIVSTRAWKKNEKLELLVGCIAELREADE 149 (247)
T ss_dssp TCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGG
T ss_pred ecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHH
Confidence 45799999999999999999999999996666554
No 109
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.91 E-value=0.00039 Score=63.32 Aligned_cols=46 Identities=24% Similarity=0.583 Sum_probs=38.8
Q ss_pred CCcccccCCCccCCCCceEEcCC--CC-ccccCccccCccccCCCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNR--CQ-IAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~--C~-~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
...| ||+... ++.||.||. |. .-||..|+|+...|. +.|+|..|..
T Consensus 36 ~~yC-iC~~~~---~g~MI~CD~~dC~~~WfH~~CVgl~~~p~-g~W~Cp~C~~ 84 (91)
T 1weu_A 36 PTYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQ 84 (91)
T ss_dssp CBCS-TTCCBC---CSCCCCCSCSSCSCCCCCSTTTTCSSCCC-SSCCCTTTCC
T ss_pred CcEE-ECCCCC---CCCEeEecCCCCCCCCEecccCCcCcCCC-CCEECcCccC
Confidence 3456 999864 268999999 77 589999999999888 9999999975
No 110
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=96.89 E-value=0.0005 Score=68.08 Aligned_cols=48 Identities=10% Similarity=0.038 Sum_probs=33.9
Q ss_pred cccCCceEEEecCc-cCceeeeccccCCCCeEEEecceecCHHHHHHHH
Q 002201 894 RTEHDRVCFGRSGI-HGWGLFARRNIQEGEMVLEYRGEQVRRSIADLRE 941 (954)
Q Consensus 894 ~~~~~~~~v~~S~i-hG~Glfa~~~i~~g~~ViEY~GEvI~~~~ad~Re 941 (954)
.+.-..+.|..|.. +|+||||+++|++|+.+++|.||+++..+++.|+
T Consensus 19 ~slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~ 67 (151)
T 3db5_A 19 LSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT 67 (151)
T ss_dssp HTCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC--------
T ss_pred hcCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc
Confidence 44556788988743 7999999999999999999999999999998764
No 111
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=96.80 E-value=0.00024 Score=64.27 Aligned_cols=53 Identities=23% Similarity=0.545 Sum_probs=41.5
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...+|.+|+.... .+...||.||.|++|||..|.++.. .+...++|+.|....
T Consensus 24 ~~~~C~vC~~~~s-~~~~~ll~CD~C~~~fH~~Cl~p~~-----vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 24 EDAVCSICMDGES-QNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCSSCCSSSS-CSEEEEEECSSSCCCCCHHHHTCSS-----CCSSCCCCHHHHHHT
T ss_pred CCCcCCcCCCCCC-CCCCCEEECCCCCchhhcccCCCCc-----cCCCceECccccCcc
Confidence 4567888886542 2345799999999999999998864 367899999998655
No 112
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=96.79 E-value=0.00092 Score=67.95 Aligned_cols=51 Identities=22% Similarity=0.698 Sum_probs=39.9
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
..+|.+|+ +++++|+||.|.+++|..|..+.-. ..+...|+||.|+.....
T Consensus 4 ~~~C~~C~------~~g~ll~Cd~C~~~~H~~C~~p~l~---~~p~~~W~C~~C~~~~~~ 54 (184)
T 3o36_A 4 EDWCAVCQ------NGGELLCCEKCPKVFHLSCHVPTLT---NFPSGEWICTFCRDLSKP 54 (184)
T ss_dssp CSSCTTTC------CCSSCEECSSSSCEECTTTSSSCCS---SCCSSCCCCTTTSCSSSC
T ss_pred CCccccCC------CCCeeeecCCCCcccCccccCCCCC---CCCCCCEECccccCcccc
Confidence 35788886 3467999999999999999755433 446778999999976643
No 113
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=96.71 E-value=0.001 Score=62.34 Aligned_cols=45 Identities=29% Similarity=0.643 Sum_probs=36.4
Q ss_pred cCCccccccccccCCCCCCeeeCC--CCCceeeccccccccccccccCCCcccCCccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCD--GCKVWVHAECDKISSSHFKDLGGSEYYCPACK 506 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd--~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr 506 (954)
...||.+|+ ++++||.|| .|.+|+|..|.++.. .+...++||.|.
T Consensus 14 ~~~~C~~C~------~~G~ll~CD~~~Cp~~fH~~Cl~L~~-----~P~g~W~Cp~c~ 60 (107)
T 4gne_A 14 HEDYCFQCG------DGGELVMCDKKDCPKAYHLLCLNLTQ-----PPYGKWECPWHQ 60 (107)
T ss_dssp SCSSCTTTC------CCSEEEECCSTTCCCEECTGGGTCSS-----CCSSCCCCGGGB
T ss_pred CCCCCCcCC------CCCcEeEECCCCCCcccccccCcCCc-----CCCCCEECCCCC
Confidence 345788886 457899999 899999999987543 367889999986
No 114
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.71 E-value=0.00082 Score=57.93 Aligned_cols=48 Identities=21% Similarity=0.332 Sum_probs=38.9
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEeccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVY 685 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~ 685 (954)
....| ||+.... ++.+|.|+.|..=||..|+|+...+....|+|..|.
T Consensus 18 ~~~~C-iC~~~~~--~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~ 65 (68)
T 3o70_A 18 GLVTC-FCMKPFA--GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 65 (68)
T ss_dssp TCCCS-TTCCCCT--TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHH
T ss_pred CceEe-ECCCcCC--CCCEEECCCCCccccccccCcCcccCCCcEECCCCC
Confidence 34567 9998543 457999999999999999999875434789999996
No 115
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=96.67 E-value=0.0014 Score=67.82 Aligned_cols=52 Identities=21% Similarity=0.653 Sum_probs=40.3
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNFE 512 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~~ 512 (954)
..+|.+|+ +++++|.||.|.+|+|..|..+.-. ..+...|+||.|+......
T Consensus 7 ~~~C~~C~------~~g~ll~Cd~C~~~~H~~Cl~p~l~---~~p~~~W~C~~C~~~~~~~ 58 (207)
T 3u5n_A 7 EDWCAVCQ------NGGDLLCCEKCPKVFHLTCHVPTLL---SFPSGDWICTFCRDIGKPE 58 (207)
T ss_dssp CSSBTTTC------CCEEEEECSSSSCEECTTTSSSCCS---SCCSSCCCCTTTSCSSSCS
T ss_pred CCCCCCCC------CCCceEEcCCCCCccCCccCCCCCC---CCCCCCEEeCceeCccccc
Confidence 45788886 3457999999999999999865433 3467889999999776543
No 116
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.64 E-value=0.001 Score=65.27 Aligned_cols=89 Identities=22% Similarity=0.502 Sum_probs=61.0
Q ss_pred CccCCCCCCCCCCCCccccccccc--cccccccccHHhhhcC----------CccccccccccCCCCCCeeeCCCCCcee
Q 002201 413 KRPCDGCGMTLPSKSAKKIKASTT--GDQLFCRTCAKLMKSK----------HFCGICKKVWNHSDGGSWVRCDGCKVWV 480 (954)
Q Consensus 413 c~~C~~CG~~~~~~~~~k~~~~w~--~~~~lC~~C~~l~~kg----------~yCpiC~k~y~~~d~~~~VqCd~C~~Wv 480 (954)
-..|..||...+- .+.+...-| -.-.+|.+|...|.++ .||-+|+ +++++++||.|.+-|
T Consensus 14 ~i~Ct~Cg~~~~~--~q~~~~~~HPll~v~~C~~C~~~y~~~~~~~d~Dg~~d~C~vC~------~GG~LlcCD~Cpr~F 85 (142)
T 2lbm_A 14 IVSCTACGQQVNH--FQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCA------EGGNLICCDFCHNAF 85 (142)
T ss_dssp CCBCTTTCSBSTT--TCSSSEEEETTTTEEEEHHHHHHHHHSCCCBCTTSCBCSCSSSC------CCSSEEECSSSCCEE
T ss_pred CCEecCCCCcccc--ccccchhcCCCccccccHHHHHHHhcCCceecCCCCCCeecccC------CCCcEEeCCCCCCee
Confidence 3469999988742 111111122 2457899998755533 4788885 678999999999999
Q ss_pred eccccccccc--cccc--cCCCcccCCcccccc
Q 002201 481 HAECDKISSS--HFKD--LGGSEYYCPACKAKF 509 (954)
Q Consensus 481 H~~Cd~~~~~--~~e~--~~~~~Y~Cp~Cr~k~ 509 (954)
|..|..+.-. .++. .+...+.|+.|..+.
T Consensus 86 h~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 86 CKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp EHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred eHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 9999964332 2332 267899999998654
No 117
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.60 E-value=0.00043 Score=66.83 Aligned_cols=47 Identities=21% Similarity=0.491 Sum_probs=39.7
Q ss_pred CCCCcccccCCCccCCCCceEEcCCCCccccCccccCc-------cc--cCCCceeEecccc
Q 002201 634 WTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGAR-------NV--QDFTSWVFEIVYT 686 (954)
Q Consensus 634 ~~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~-------~~--p~~~~W~C~~C~~ 686 (954)
..++.|.||.++ ++|+.|+.|.++||..|+.+. .+ ++ +.|.|..|..
T Consensus 55 g~~~~C~vC~dG-----G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~-~~W~C~~C~~ 110 (129)
T 3ql9_A 55 GMDEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRRELSTIMDEN-NQWYCYICHP 110 (129)
T ss_dssp SCBSSCTTTCCC-----SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTT-SCCCCTTTCC
T ss_pred CCCCcCeecCCC-----CeeEecCCCchhhhHHHhCCCcchhHHHHhccCC-CCeEcCCcCC
Confidence 357789999997 799999999999999999853 33 45 8999999964
No 118
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.50 E-value=0.00063 Score=58.97 Aligned_cols=45 Identities=18% Similarity=0.443 Sum_probs=37.8
Q ss_pred cccccCCCccCCCCceEEcCCCC---ccccCccccCccccCCCceeEecccc
Q 002201 638 RCAVCRWVEDWDYNKIIICNRCQ---IAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~C~---~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
.-++|+..+ ++.||.||.|. .-||..|+|+...|. +.|+|..|..
T Consensus 7 ~yC~C~~~~---~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~-~~w~Cp~C~~ 54 (70)
T 1x4i_A 7 GYCICNQVS---YGEMVGCDNQDCPIEWFHYGCVGLTEAPK-GKWYCPQCTA 54 (70)
T ss_dssp CCSTTSCCC---CSSEECCSCTTCSCCCEEHHHHTCSSCCS-SCCCCHHHHH
T ss_pred eEEEcCCCC---CCCEeEeCCCCCCccCCcccccccCcCCC-CCEECCCCCc
Confidence 344798863 35899999974 789999999999887 9999999986
No 119
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.45 E-value=0.0015 Score=55.24 Aligned_cols=51 Identities=14% Similarity=0.342 Sum_probs=41.5
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCcccc--CCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQ--DFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p--~~~~W~C~~C~~ 686 (954)
....|.+|+.... ++..+|.|+.|..=||..|.|+...+ ....|+|..|..
T Consensus 5 e~~~C~~C~~~~~-~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 5 SSGQCGACGESYA-ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp SCCCCSSSCCCCC-SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCCCCccC-CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 4568999988643 34689999999999999999998653 247899999975
No 120
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=96.41 E-value=0.0043 Score=56.11 Aligned_cols=49 Identities=29% Similarity=0.746 Sum_probs=37.9
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
..+|.+|++ ++++|.||.|.+.+|..|..+.-. ..+..+++|+.|....
T Consensus 25 ~~~C~vC~~------~g~LL~CD~C~~~fH~~Cl~PpL~---~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 25 ATICRVCQK------PGDLVMCNQCEFCFHLDCHLPALQ---DVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSCCSSSCS------SSCCEECTTSSCEECTTSSSTTCC---CCCSSSCCCCSCCCCC
T ss_pred CCcCcCcCC------CCCEEECCCCCCceecccCCCCCC---CCcCCCcCCccccCCC
Confidence 456777764 347999999999999999855432 4467899999999654
No 121
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.39 E-value=0.002 Score=58.20 Aligned_cols=59 Identities=20% Similarity=0.551 Sum_probs=42.8
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeecccccccccccc-ccCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFK-DLGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e-~~~~~~Y~Cp~Cr~k~~ 510 (954)
...+|.+|++... .....||.||.|++.+|..|-.+.-.... ..+...++|+.|....+
T Consensus 15 ~~~~C~vC~~~~~-~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTV-ASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCC-CTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCC-CCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 3567889987533 22357999999999999999876543211 24678999999987654
No 122
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.37 E-value=0.0018 Score=62.48 Aligned_cols=89 Identities=22% Similarity=0.531 Sum_probs=60.5
Q ss_pred CccCCCCCCCCCCCCccccccccc--cccccccccHHhhhcC----------CccccccccccCCCCCCeeeCCCCCcee
Q 002201 413 KRPCDGCGMTLPSKSAKKIKASTT--GDQLFCRTCAKLMKSK----------HFCGICKKVWNHSDGGSWVRCDGCKVWV 480 (954)
Q Consensus 413 c~~C~~CG~~~~~~~~~k~~~~w~--~~~~lC~~C~~l~~kg----------~yCpiC~k~y~~~d~~~~VqCd~C~~Wv 480 (954)
-+.|..||....-- .++ ...-| -.-.+|.+|...+..+ .||-+|. +++++++||.|.+-+
T Consensus 8 ~~~Ct~Cg~~~~~~-~~~-~~~~HPll~v~~C~~C~~~y~~~~~~~d~Dg~~~~C~vC~------dGG~LlcCd~Cpr~F 79 (129)
T 3ql9_A 8 IVSCTACGQQVNHF-QKD-SIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCA------EGGNLICCDFCHNAF 79 (129)
T ss_dssp SCBCTTTCCBCCCC-BTT-TEEECTTTCCEEEHHHHHHHHHSCCCBCTTSCBSSCTTTC------CCSEEEECSSSSCEE
T ss_pred ceEeccCCCCCccc-CCC-ccccCCCcCceeCHhHHhhhhccccccCCCCCCCcCeecC------CCCeeEecCCCchhh
Confidence 34599999887421 111 11112 1357999999866432 3788885 678899999999999
Q ss_pred ecccccccc--cccccc--CCCcccCCcccccc
Q 002201 481 HAECDKISS--SHFKDL--GGSEYYCPACKAKF 509 (954)
Q Consensus 481 H~~Cd~~~~--~~~e~~--~~~~Y~Cp~Cr~k~ 509 (954)
|.+|....- ..+... +...+.|+.|..+.
T Consensus 80 c~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 80 CKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp EHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred hHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 999986432 223222 57889999998654
No 123
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=96.34 E-value=0.0037 Score=59.36 Aligned_cols=89 Identities=21% Similarity=0.405 Sum_probs=54.5
Q ss_pred CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc-hhhh
Q 002201 256 PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF-VDRF 334 (954)
Q Consensus 256 ~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~-~d~f 334 (954)
|-.|..|=|||.|+. .||+|||+|-.-. + ......|.|-.--.+.+.+-+. |+-++|+||.=. ..++
T Consensus 2 p~~~e~GmlVW~K~q-~yPfWPAVVKSV~--------r--~ekkA~VL~Ie~~m~~ekrGi~-V~LrrLK~fDC~ek~~L 69 (134)
T 3pmi_A 2 PRSFEVGMLVWHKHK-KYPFWPAVVKSVR--------Q--RDKKASVLYIEGHMNPKMKGFT-VSLKSLKHFDCKEKQTL 69 (134)
T ss_dssp --CCCTTCEEEECCT-TSCCEEEEEEEEE--------G--GGTEEEEEECCSSCCTTSCCEE-EEGGGCEETTSTTHHHH
T ss_pred CcccccceEEEEEec-cCCCcchheeeee--------e--ccceEEEEEEeCCCCcccCceE-eEcccCCCCChHhHHHH
Confidence 567889999999997 6999999996433 1 1224678888733332333343 888899999622 2233
Q ss_pred cccccCCCCChhHHHHHHHHHHHHHhhh
Q 002201 335 QEQSELNDCKPSDFQMALEEAFLADQGF 362 (954)
Q Consensus 335 ~~q~~~~k~k~~~f~~AleEA~~a~~g~ 362 (954)
. .+.+ .+|.++|.=...--..|
T Consensus 70 ~-----~rAr-e~Y~qsi~Wc~sLI~~Y 91 (134)
T 3pmi_A 70 L-----NQAR-EDFNQDIGWCVSLITDY 91 (134)
T ss_dssp H-----HHHT-TTCHHHHHHHHHHHHHH
T ss_pred H-----HHHH-HHhccchhhhhhhhhhh
Confidence 2 2212 36777777664443333
No 124
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=96.33 E-value=0.0026 Score=56.17 Aligned_cols=54 Identities=31% Similarity=0.826 Sum_probs=39.6
Q ss_pred ccccccHHhhhcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCc-ccCCcccc
Q 002201 440 LFCRTCAKLMKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSE-YYCPACKA 507 (954)
Q Consensus 440 ~lC~~C~~l~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~-Y~Cp~Cr~ 507 (954)
..|..|. |.+|++. .+...||.||.|++++|..|..+.-. ..+... ++|+.|++
T Consensus 22 W~C~~C~--------C~vC~~~---~d~~~ll~CD~C~~~yH~~Cl~PpL~---~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 22 RLCRVCA--------CHLCGGR---QDPDKQLMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 76 (77)
T ss_dssp SCCTTTS--------BTTTCCC---SCGGGEEECTTTCCEEETTTSSSCCS---SCCSSSCCCCTTTC-
T ss_pred CCCCCCc--------CCccCCC---CCCcceeEeCCCCCccCcccCCCccc---CCCCCCceECcCccc
Confidence 3566663 7777653 34567999999999999999875433 345566 99999985
No 125
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=96.11 E-value=0.0037 Score=65.62 Aligned_cols=55 Identities=31% Similarity=0.791 Sum_probs=37.7
Q ss_pred ccccccHHhhhcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCC-cccCCccccc
Q 002201 440 LFCRTCAKLMKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGS-EYYCPACKAK 508 (954)
Q Consensus 440 ~lC~~C~~l~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~-~Y~Cp~Cr~k 508 (954)
..|..| .|.+|++. +++..||.||.|++++|..|..+.-. ..+.. .++||.|...
T Consensus 170 w~C~~c--------~C~vC~~~---~~~~~lL~CD~C~~~yH~~CL~PPL~---~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 170 RLCRVC--------ACHLCGGR---QDPDKQLMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRND 225 (226)
T ss_dssp SCCTTT--------SCSSSCCC---CC--CCEECSSSCCEECSCC--CCCC---SCCSSSCCCCGGGC--
T ss_pred EecCCC--------CCcCCCCC---CCCCCeEEcCCCCcceeCccCCCCcc---cCCCCCCCCCcCCcCc
Confidence 356666 38888762 45678999999999999999875433 34666 8999999753
No 126
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=96.02 E-value=0.0026 Score=67.20 Aligned_cols=45 Identities=11% Similarity=0.045 Sum_probs=37.2
Q ss_pred cccCCceEEEecCccCceeeec-cccCCCCeEEEecceecCHHHHH
Q 002201 894 RTEHDRVCFGRSGIHGWGLFAR-RNIQEGEMVLEYRGEQVRRSIAD 938 (954)
Q Consensus 894 ~~~~~~~~v~~S~ihG~Glfa~-~~i~~g~~ViEY~GEvI~~~~ad 938 (954)
.+.-..+.|.+|.+||+|||+. +.|++|+.+++|+|++++..+|+
T Consensus 68 lSLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~ 113 (237)
T 3ray_A 68 LTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA 113 (237)
T ss_dssp HTCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC----
T ss_pred hcCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc
Confidence 3445679999999999999997 89999999999999999988875
No 127
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=95.99 E-value=0.0028 Score=59.07 Aligned_cols=48 Identities=27% Similarity=0.654 Sum_probs=40.0
Q ss_pred CcccccCCCccCCCCceEEcC-CCCccccCccccCcc--------ccCCCceeEecccc
Q 002201 637 ERCAVCRWVEDWDYNKIIICN-RCQIAVHQECYGARN--------VQDFTSWVFEIVYT 686 (954)
Q Consensus 637 ~~C~VC~~~e~~~~~~Li~C~-~C~~avH~~CyGv~~--------~p~~~~W~C~~C~~ 686 (954)
..|.+|+.... +++.+|.|+ .|..=||..|.|+.. .|+ ..|+|..|..
T Consensus 4 ~~C~iC~~p~~-~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~-~~~~Cp~C~~ 60 (105)
T 2xb1_A 4 YPCGACRSEVN-DDQDAILCEASCQKWFHRECTGMTESAYGLLTTEAS-AVWACDLCLK 60 (105)
T ss_dssp CBCTTTCSBCC-TTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTT-EEECCHHHHH
T ss_pred CCCCCCCCccC-CCCCEEEecCCcccccccccCCcCHHHHHhhccCCC-CCEECccccC
Confidence 47999998743 346799998 999999999999985 244 7899999987
No 128
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=95.92 E-value=0.0037 Score=50.84 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=37.4
Q ss_pred cccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEeccc
Q 002201 638 RCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVY 685 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~ 685 (954)
.=.+|+... +++.+|.|+.|..=||..|.|+...+....|+|..|.
T Consensus 5 ~~C~C~~~~--~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~ 50 (52)
T 3o7a_A 5 VTCFCMKPF--AGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 50 (52)
T ss_dssp BCSTTCCBC--TTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHH
T ss_pred eEEEeCCcC--CCCCEEEcCCCCccccccccCCCcccCCCcEECcCCC
Confidence 344788753 3569999999999999999999876444799999986
No 129
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=95.91 E-value=0.0045 Score=63.38 Aligned_cols=50 Identities=26% Similarity=0.727 Sum_probs=39.4
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
..+|.+|+ ++++++.||+|.+.+|..|..+.-. ..+...++|+.|+....
T Consensus 2 ~~~C~~C~------~~g~ll~Cd~C~~~~H~~Cl~p~l~---~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 2 ATICRVCQ------KPGDLVMCNQCEFCFHLDCHLPALQ---DVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CCCBTTTC------CCSSCCCCTTTCCBCCSTTSTTCCS---SCCCTTCCTTTTSCSCC
T ss_pred CCcCccCC------CCCceeECCCCCchhccccCCCCcc---cCCCCCCCCcCccCCCC
Confidence 46799997 3457999999999999999854332 34678899999997653
No 130
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=95.81 E-value=0.002 Score=55.11 Aligned_cols=49 Identities=22% Similarity=0.548 Sum_probs=39.2
Q ss_pred CCCcccccCCCccCCCCceEEcC-CCCccccCccccCccc--------cCCCceeEeccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICN-RCQIAVHQECYGARNV--------QDFTSWVFEIVY 685 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~-~C~~avH~~CyGv~~~--------p~~~~W~C~~C~ 685 (954)
....|.+|..... ++..+|.|+ .|..=||..|.|+... |. +.|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~-~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~-~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVN-DDQDAILCEASCQKWFHRICTGMTETAYGLLTAEAS-AVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCC-TTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTT-EEECCHHHH
T ss_pred CcCcCccCCCccC-CCCCeEecccCccccCchhccCCCHHHHHHhhccCC-CcEECcCcc
Confidence 3457999998643 346899999 9999999999999863 44 689999996
No 131
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.70 E-value=0.0061 Score=61.68 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=34.9
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeeccccccccccccc-cCCCcccCCcccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKD-LGGSEYYCPACKAKF 509 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~-~~~~~Y~Cp~Cr~k~ 509 (954)
|| .|++-.+ -+..|+||..|.+|||.+|.+.....+.. .-.+.|.|..|....
T Consensus 7 yC-YCG~~~~--~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 7 SV-DEENGRQ--LGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp -----CTTCC--TTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred EE-EcCCCCC--CCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 55 6776432 34679999999999999999754432221 235789999998644
No 132
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.68 E-value=0.0036 Score=55.26 Aligned_cols=49 Identities=20% Similarity=0.343 Sum_probs=39.6
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccCccccC--CCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQD--FTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~--~~~W~C~~C~~ 686 (954)
...| +|+...+ ++..+|.|+.|..=||..|.|+...+. ...|+|..|..
T Consensus 12 ~~~C-~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 62 (79)
T 1wep_A 12 PVYC-LCRQPYN-VNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEA 62 (79)
T ss_dssp CCCS-TTSCSCC-SSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTT
T ss_pred ccEE-EcCCccC-CCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccc
Confidence 3455 9988643 347899999999999999999986532 47899999987
No 133
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=95.59 E-value=0.0038 Score=55.01 Aligned_cols=48 Identities=27% Similarity=0.457 Sum_probs=39.3
Q ss_pred CCcccccCCCccCCCCceEEcC--CCCccccCccccCccccC------CCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICN--RCQIAVHQECYGARNVQD------FTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~--~C~~avH~~CyGv~~~p~------~~~W~C~~C~~ 686 (954)
...| ||+... +++.+|.|+ .|..=||..|+|+...+. ...|+|..|..
T Consensus 16 ~~~C-iC~~~~--~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~ 71 (78)
T 1wew_A 16 KVRC-VCGNSL--ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRL 71 (78)
T ss_dssp CCCC-SSCCCC--CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHH
T ss_pred CEEe-ECCCcC--CCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCc
Confidence 3467 899873 457999999 999999999999987642 36899999975
No 134
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.49 E-value=0.0029 Score=55.39 Aligned_cols=48 Identities=21% Similarity=0.525 Sum_probs=38.6
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccCcccc------CCCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQ------DFTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p------~~~~W~C~~C~~ 686 (954)
...| +|+.... ...+|.|+.|..=||..|+|+...+ ....|+|..|..
T Consensus 16 ~~~C-~C~~~~~--~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~ 69 (76)
T 1wem_A 16 ALYC-ICRQPHN--NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTI 69 (76)
T ss_dssp CCCS-TTCCCCC--SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred CCEE-ECCCccC--CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcC
Confidence 3456 9998653 4589999999999999999998653 237899999975
No 135
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.39 E-value=0.006 Score=49.61 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=36.8
Q ss_pred cccccCCCccCCCCceEEcC-CCCccccCccccCcccc-CCCceeEeccc
Q 002201 638 RCAVCRWVEDWDYNKIIICN-RCQIAVHQECYGARNVQ-DFTSWVFEIVY 685 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~-~C~~avH~~CyGv~~~p-~~~~W~C~~C~ 685 (954)
.|.+|+.... ++..+|.|+ .|..=||..|.|+...+ ....|+|..|+
T Consensus 4 ~cc~C~~p~~-~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCK-DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCC-TTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccC-CCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4788887653 346799999 89999999999998653 12789999985
No 136
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=95.34 E-value=0.0073 Score=52.30 Aligned_cols=49 Identities=20% Similarity=0.472 Sum_probs=37.9
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccCcccc-CCCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQ-DFTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p-~~~~W~C~~C~~ 686 (954)
...| +|+.... +...+|.|+.|..=||..|+|+...+ ....|+|..|..
T Consensus 16 ~~~C-~C~~~~~-~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~ 65 (72)
T 1wee_A 16 KVDC-KCGTKDD-DGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIE 65 (72)
T ss_dssp EECC-TTCCCSC-CSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHH
T ss_pred ceEe-eCCCccC-CCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccC
Confidence 3468 7988632 22469999999999999999998532 237899999975
No 137
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=95.28 E-value=0.0026 Score=63.84 Aligned_cols=50 Identities=28% Similarity=0.495 Sum_probs=40.1
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCcccc--CCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQ--DFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p--~~~~W~C~~C~~ 686 (954)
....| +|+...+ +.+.+|.|+.|..-||..|.|+...+ ..+.|+|..|..
T Consensus 7 ~~~~C-~C~~~~~-~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 7 TKLYC-ICKTPED-ESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp CCEET-TTTEECC-TTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCcEe-eCCCCCC-CCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 35578 9998643 34679999999999999999997543 247999999986
No 138
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=95.03 E-value=0.0049 Score=53.88 Aligned_cols=51 Identities=22% Similarity=0.307 Sum_probs=40.6
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCcccc--CCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQ--DFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p--~~~~W~C~~C~~ 686 (954)
+...-+||+... ++++.+|.|+.|..=||..|.|+...+ ....|+|..|..
T Consensus 8 ~~~~yCiC~~~~-~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 8 TVPVYCVCRLPY-DVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp CCCEETTTTEEC-CTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred CCeeEEECCCcC-CCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 445666998753 234689999999999999999998653 336899999987
No 139
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=94.57 E-value=0.018 Score=49.37 Aligned_cols=46 Identities=24% Similarity=0.489 Sum_probs=35.5
Q ss_pred cccccCCCccCCCCceEEcC--CCCccccCccccCccccCC-----CceeEecccc
Q 002201 638 RCAVCRWVEDWDYNKIIICN--RCQIAVHQECYGARNVQDF-----TSWVFEIVYT 686 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~--~C~~avH~~CyGv~~~p~~-----~~W~C~~C~~ 686 (954)
.| ||+... +++.+|.|+ .|..=+|..|+|+...+.. ..|+|..|+.
T Consensus 12 ~C-~C~~~~--~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 12 RC-ICSSTM--VNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp CC-TTCCCS--CCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred Ee-ECCCCc--CCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 35 898753 346899999 4999999999999765421 3699999964
No 140
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=94.46 E-value=0.0083 Score=59.47 Aligned_cols=38 Identities=24% Similarity=0.180 Sum_probs=32.6
Q ss_pred CCceEEEecCccCceeeeccccCCCCeEEEecceecCHHHH
Q 002201 897 HDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIA 937 (954)
Q Consensus 897 ~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~GEvI~~~~a 937 (954)
-..|++.++ |+||||+++|++|+.+++|.||+++.+++
T Consensus 22 P~~L~i~~~---g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~ 59 (152)
T 3ihx_A 22 PLVLYIDRF---LGGVFSKRRIPKRTQFGPVEGPLVRGSEL 59 (152)
T ss_dssp CTTEEECTT---TCSEEESSCBCSSCEECCCCSCEECSTTC
T ss_pred CcceEEeec---CCeEEECceecCCCEEEeeccEEcCHHHh
Confidence 345667654 79999999999999999999999998766
No 141
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=93.88 E-value=0.015 Score=51.73 Aligned_cols=56 Identities=20% Similarity=0.365 Sum_probs=41.7
Q ss_pred CCCCcccccCCCccCCCCceEEcCCCCccccCccccCcc-------------ccCCCceeEeccccCcCCCC
Q 002201 634 WTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARN-------------VQDFTSWVFEIVYTEGGALK 692 (954)
Q Consensus 634 ~~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~-------------~p~~~~W~C~~C~~~gGaLK 692 (954)
.+|+.|.||...+ .+.|+.|.-|.+.||..|+-... ......|.|..|.+-+-.|.
T Consensus 13 ~~D~~C~VC~~~t---~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~lLLt 81 (89)
T 1wil_A 13 VNDEMCDVCEVWT---AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNINLLLT 81 (89)
T ss_dssp CCSCCCTTTCCCC---SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCCSSSC
T ss_pred CCCcccCcccccc---ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhhhhcc
Confidence 3799999998643 47899999999999999985531 11126799999987444443
No 142
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=93.39 E-value=0.02 Score=58.49 Aligned_cols=54 Identities=20% Similarity=0.384 Sum_probs=40.6
Q ss_pred CcccccCCCccCCC--CceEEcCCCCccccCccccCccc--------cCCCceeEeccccCcCC
Q 002201 637 ERCAVCRWVEDWDY--NKIIICNRCQIAVHQECYGARNV--------QDFTSWVFEIVYTEGGA 690 (954)
Q Consensus 637 ~~C~VC~~~e~~~~--~~Li~C~~C~~avH~~CyGv~~~--------p~~~~W~C~~C~~~gGa 690 (954)
..|.||+.....++ ..+|.|+.|..=||..|.|+... |+...|+|..|....++
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 46999987644332 35999999999999999999752 22247999999874443
No 143
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=92.89 E-value=0.16 Score=45.54 Aligned_cols=57 Identities=21% Similarity=0.201 Sum_probs=42.8
Q ss_pred CCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 255 GPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 255 ~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
++..|.+||.|.||-+ .-.|.||+|..-. ..+.|.|.|++ .+.-=|....|.|+...
T Consensus 18 ~~~~f~vGd~VlArW~-D~~yYPAkI~sV~-----------~~~~YtV~F~D-------G~~etvk~~~IKp~~~~ 74 (85)
T 3qii_A 18 GSSEFQINEQVLACWS-DCRFYPAKVTAVN-----------KDGTYTVKFYD-------GVVQTVKHIHVKAFSKD 74 (85)
T ss_dssp ---CCCTTCEEEEECT-TSCEEEEEEEEEC-----------TTSEEEEEETT-------SCEEEEEGGGEEECC--
T ss_pred CCcccccCCEEEEEeC-CCCEeeEEEEEEC-----------CCCeEEEEEeC-------CCeEEecHHHcccCChh
Confidence 5778999999999996 7999999997544 11469999998 34556899999999764
No 144
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=90.96 E-value=0.4 Score=41.14 Aligned_cols=57 Identities=19% Similarity=0.157 Sum_probs=43.4
Q ss_pred CCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 255 GPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 255 ~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
-|..|.+||.|-||-+ .-.|.||+|..-. . .+.|-|.|++ .+..=|....|.|+...
T Consensus 3 ~~~~~~vGd~vmArW~-D~~yYpA~I~si~----~-------~~~Y~V~F~d-------G~~etvk~~~ikp~~~~ 59 (67)
T 3p8d_A 3 MSSEFQINEQVLACWS-DCRFYPAKVTAVN----K-------DGTYTVKFYD-------GVVQTVKHIHVKAFSKD 59 (67)
T ss_dssp --CCCCTTCEEEEECT-TSCEEEEEEEEEC----T-------TSEEEEEETT-------SCEEEEEGGGEEECC--
T ss_pred cCcccccCCEEEEEcC-CCCEeeEEEEEEC----C-------CCeEEEEEeC-------CceEEEeHHHcccCCcc
Confidence 3678999999999996 7899999997444 1 1469999997 45566889999999764
No 145
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=89.22 E-value=0.33 Score=38.59 Aligned_cols=50 Identities=24% Similarity=0.448 Sum_probs=34.6
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
....|+||...+...+ ..+.-..|.+.||.+|... +-.....||.||...
T Consensus 4 ~~~~C~IC~~~~~~~~--~~~~~~~C~H~f~~~Ci~~-------w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 4 DGVECAVCLAELEDGE--EARFLPRCGHGFHAECVDM-------WLGSHSTCPLCRLTV 53 (55)
T ss_dssp CSCCCTTTCCCCCTTS--CCEECSSSCCEECTTHHHH-------TTTTCCSCSSSCCCS
T ss_pred CCCcCccCCccccCCC--ceEECCCCCCcccHHHHHH-------HHHcCCcCcCCCCEe
Confidence 3457999988776443 3455557999999999632 222356899999654
No 146
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.77 E-value=0.29 Score=42.73 Aligned_cols=67 Identities=19% Similarity=0.307 Sum_probs=44.5
Q ss_pred ccccccccccccHHhhhcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 434 STTGDQLFCRTCAKLMKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 434 ~w~~~~~lC~~C~~l~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
+|..+...|.-|...+. ..|++|...|..++ ..+.-..|.+.||.+|.. ..-.....||.||.....
T Consensus 10 ~~~~~~~~C~IC~~~~~--~~C~iC~~~~~~~~--~~~~~~~C~H~FH~~Ci~-------~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 10 SWDVECDTCAICRVQVM--DACLRCQAENKQED--CVVVWGECNHSFHNCCMS-------LWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CCSCCCSCBTTTTBCTT--SCCTTHHHHTCTTT--CCEEEETTSCEEEHHHHH-------HHTTTCCBCTTTCCBCCE
T ss_pred eecCCCCCCcccChhhh--ccCcccccccCCCc--eEEEeCCCCCccChHHHH-------HHHHhCCCCCCcCCCcch
Confidence 35456677888866554 56999988776443 233444799999999953 221223599999977643
No 147
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=86.23 E-value=0.26 Score=57.51 Aligned_cols=37 Identities=19% Similarity=0.313 Sum_probs=31.9
Q ss_pred CCceEEcCCCCccccCccccCcccc--CCCceeEecccc
Q 002201 650 YNKIIICNRCQIAVHQECYGARNVQ--DFTSWVFEIVYT 686 (954)
Q Consensus 650 ~~~Li~C~~C~~avH~~CyGv~~~p--~~~~W~C~~C~~ 686 (954)
+..+|.||.|..=||..|.|+.... .++.|+|..|..
T Consensus 55 ~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 55 DFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 4579999999999999999998753 237899999998
No 148
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=84.81 E-value=0.13 Score=59.15 Aligned_cols=50 Identities=20% Similarity=0.282 Sum_probs=40.4
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccCcccc--CCCceeEecccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQ--DFTSWVFEIVYT 686 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p--~~~~W~C~~C~~ 686 (954)
....++|+... ++++.+|.|+.|..=||..|.|+...+ ..+.|+|..|..
T Consensus 4 ~~~yCiC~~~~-d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~ 55 (447)
T 3kv4_A 4 VPVYCLCRLPY-DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 55 (447)
T ss_dssp CCEETTTTEEC-CTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHH
T ss_pred CCeEEeCCCcC-CCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcc
Confidence 34677998754 235789999999999999999998654 236899999988
No 149
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=84.68 E-value=0.16 Score=59.04 Aligned_cols=49 Identities=20% Similarity=0.310 Sum_probs=39.4
Q ss_pred CcccccCCCccCCCCceEEcCCCCccccCccccCccccC--CCceeEecccc
Q 002201 637 ERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQD--FTSWVFEIVYT 686 (954)
Q Consensus 637 ~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~--~~~W~C~~C~~ 686 (954)
..-++|+...+ .++.+|.|+.|..=||..|.|+...+. .+.|+|..|..
T Consensus 37 ~~yC~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 37 PVYCVCRQPYD-VNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp CEETTTTEECC-TTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred CeEEeCCCcCC-CCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 34459987542 347899999999999999999987642 36799999997
No 150
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=83.49 E-value=1.7 Score=40.20 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=46.1
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
..|.+|+.|++.-+ --|++|.|++-. . ......|.|.|-||... -=-||+.++|++|.+.
T Consensus 21 ~~f~vGekVl~~~~--~~~YeAkIl~v~-~-------~~~~~~Y~VHY~GwNkR----~DEWV~~~Rl~k~t~e 80 (102)
T 2f5k_A 21 PKFQEGERVLCFHG--PLLYEAKCVKVA-I-------KDKQVKYFIHYSGWNKN----WDEWVPESRVLKYVDT 80 (102)
T ss_dssp CSCCTTCEEEEESS--SSEEEEEEEEEE-E-------ETTEEEEEEEETTSCGG----GCEEEEGGGEEESSHH
T ss_pred cccCCCCEEEEEEC--CEEEEEEEEEEE-E-------cCCCcEEEEEeCCcCCC----ceeeccHhhcccCCHH
Confidence 46999999999986 569999999654 1 11233699999996543 2389999999999865
No 151
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=82.34 E-value=0.51 Score=43.42 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=35.8
Q ss_pred CccccccccccCCC------------CCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 453 HFCGICKKVWNHSD------------GGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 453 ~yCpiC~k~y~~~d------------~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
..|+||...|.... ....+.-..|.+.||.+|...--. .........||.||.....
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~--~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYC--NGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHH--HTCCSSCCBCTTTCCBSSS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHH--cccCCCCCcCCCCCCccCC
Confidence 46999988775432 112344567999999999642211 0001356899999977643
No 152
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=82.30 E-value=0.53 Score=40.22 Aligned_cols=51 Identities=24% Similarity=0.432 Sum_probs=33.6
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...|...+. +.--.|.+.||..|...-- .....||.||.....
T Consensus 14 ~~~~C~IC~~~~~~~~~---~~~~~C~H~fc~~Ci~~~~-------~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 14 SGLECPVCKEDYALGES---VRQLPCNHLFHDSCIVPWL-------EQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSCCCTTTTSCCCTTSC---EEECTTSCEEETTTTHHHH-------TTTCSCTTTCCCCCC
T ss_pred CCCCCeeCCccccCCCC---EEEeCCCCeecHHHHHHHH-------HcCCcCcCcCCccCC
Confidence 34569999887764432 2222589999999963221 123689999987654
No 153
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=82.00 E-value=0.47 Score=37.57 Aligned_cols=49 Identities=22% Similarity=0.405 Sum_probs=33.7
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...|+||...+...+ ..+....|.+.||.+|...--. ....||.||...
T Consensus 5 ~~~C~IC~~~~~~~~--~~~~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTSR--VVAHVLPCGHLLHRTCYEEMLK-------EGYRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTTT--SCEEECTTSCEEETTHHHHHHH-------HTCCCTTSCCSS
T ss_pred CCcCcccChhhcCCC--cCeEecCCCCcccHHHHHHHHH-------cCCcCCCCCCcC
Confidence 356999988775432 3456667999999999632211 127899999754
No 154
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=80.88 E-value=0.43 Score=42.55 Aligned_cols=35 Identities=29% Similarity=0.697 Sum_probs=30.4
Q ss_pred eeEeeeccC-CCeeeecCCcCcccchhhhhhcCCeE
Q 002201 736 KICVICKQI-HGSCTQCCKCSTYYHAMCASRAGYRM 770 (954)
Q Consensus 736 ~~C~iC~~~-~Ga~IqC~~C~~aFHv~CA~~aGl~m 770 (954)
..|.||.+. .+.++.|.-|.+.||..|.++.|+.-
T Consensus 16 ~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~ 51 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQ 51 (89)
T ss_dssp CCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCC
T ss_pred cccCccccccccceeccccccccccHhhcccccccc
Confidence 469999964 67888999999999999999999853
No 155
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=80.81 E-value=0.94 Score=51.02 Aligned_cols=85 Identities=19% Similarity=0.376 Sum_probs=60.1
Q ss_pred ccCCCCCCCCCCCCccccccccc--cccccccccHHhhhcCC----------ccccccccccCCCCCCeeeCC--CCCce
Q 002201 414 RPCDGCGMTLPSKSAKKIKASTT--GDQLFCRTCAKLMKSKH----------FCGICKKVWNHSDGGSWVRCD--GCKVW 479 (954)
Q Consensus 414 ~~C~~CG~~~~~~~~~k~~~~w~--~~~~lC~~C~~l~~kg~----------yCpiC~k~y~~~d~~~~VqCd--~C~~W 479 (954)
..|..||..-.- .-| -.-.+|..|...|..+. ||-+|. ++++++.|| .|.+-
T Consensus 51 ~~C~~CG~~~~~--------~~HPl~~v~lC~~Ck~~y~~~~f~~D~DG~~~yCr~C~------~Gg~l~~Cdn~~C~r~ 116 (386)
T 2pv0_B 51 DICICCGSLQVH--------TQHPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICC------SGETLLICGNPDCTRC 116 (386)
T ss_dssp GSBTTTCCSCCC--------SBCSSBSSBCCHHHHHHHHTTTTCBCSSSSBCSCTTTC------CCSSCEECCSTTCCCE
T ss_pred ceeCCCCCcCcc--------ccCCCcCcchhhHHHHHHhccCcccCCCCCcccceEcC------CCCeEEEeCCCCCCcc
Confidence 469999976221 112 24579999998776443 788886 567899999 99999
Q ss_pred eeccccccccc--cccc-cCCCcccCCccccccccc
Q 002201 480 VHAECDKISSS--HFKD-LGGSEYYCPACKAKFNFE 512 (954)
Q Consensus 480 vH~~Cd~~~~~--~~e~-~~~~~Y~Cp~Cr~k~~~~ 512 (954)
+=.+|....-. .++. .....+.|-.|..+....
T Consensus 117 FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p~~~ 152 (386)
T 2pv0_B 117 YCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSG 152 (386)
T ss_dssp ECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCCEET
T ss_pred hHHHHHHHhcChhHHHHhhccCCceEEEcCCcchHh
Confidence 99999854432 2332 345789999999776333
No 156
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=80.75 E-value=0.32 Score=43.36 Aligned_cols=50 Identities=24% Similarity=0.459 Sum_probs=32.9
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...|...+ .+.--.|.+.||..|...- -.....||.||.....
T Consensus 40 ~~~C~IC~~~~~~~~---~~~~l~C~H~Fh~~Ci~~w-------l~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 40 EMCCPICCSEYVKGD---VATELPCHHYFHKPCVSIW-------LQKSGTCPVCRCMFPP 89 (91)
T ss_dssp CSEETTTTEECCTTC---EEEEETTTEEEEHHHHHHH-------HTTTCBCTTTCCBSSC
T ss_pred CCCCcccChhhcCCC---cEEecCCCChHHHHHHHHH-------HHcCCcCcCcCccCCC
Confidence 345999988776443 2222349999999995321 1234699999976643
No 157
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=80.62 E-value=3.8 Score=34.41 Aligned_cols=57 Identities=14% Similarity=0.044 Sum_probs=42.8
Q ss_pred CCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 258 DFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 258 ~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
.+++||++=||...---|.+|+|..-. + ..+.+.|+|-+ =.+...|+...|.|-.|+
T Consensus 8 ~~~vGd~c~A~~s~Dg~wYrA~I~~v~---~-------~~~~~~V~fvd------YGn~e~V~~~~Lrpl~~~ 64 (64)
T 4a4f_A 8 SWKVGDKCMAVWSEDGQCYEAEIEEID---E-------ENGTAAITFAG------YGNAEVTPLLNLKPVEEG 64 (64)
T ss_dssp CCCTTCEEEEECTTTSSEEEEEEEEEE---T-------TTTEEEEEETT------TTEEEEEEGGGEECCSCC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEc---C-------CCCEEEEEEEe------cCCEEEEeHHHcEeCCCC
Confidence 589999999998213459999997433 0 12468999988 556788999999987653
No 158
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=78.90 E-value=0.66 Score=38.65 Aligned_cols=51 Identities=22% Similarity=0.446 Sum_probs=33.9
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNFE 512 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~~ 512 (954)
...|+||...|...+ -+....|.+.||..|...--. ....||.||......
T Consensus 14 ~~~C~IC~~~~~~~~---~~~~~~C~H~fc~~Ci~~~~~-------~~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 14 EEKCTICLSILEEGE---DVRRLPCMHLFHQVCVDQWLI-------TNKKCPICRVDIEAQ 64 (69)
T ss_dssp CCSBTTTTBCCCSSS---CEEECTTSCEEEHHHHHHHHH-------HCSBCTTTCSBSCSC
T ss_pred CCCCeeCCccccCCC---cEEEeCCCCHHHHHHHHHHHH-------cCCCCcCcCccccCc
Confidence 456999988775332 234446999999999632211 134699999877554
No 159
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=78.73 E-value=4.1 Score=32.85 Aligned_cols=53 Identities=23% Similarity=0.169 Sum_probs=37.9
Q ss_pred CCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceec
Q 002201 258 DFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFP 326 (954)
Q Consensus 258 ~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~P 326 (954)
.|++||++=||...---|.+|+|.... + ..+.+.|+|-+ =.+..-|+...|.|
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~---~-------~~~~~~V~fvD------YGn~e~v~~~~lrp 53 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALH---S-------SGMTAVVKFID------YGNYEEVLLSNIKP 53 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC------------CCSEEEEEETT------TCCEEEEEGGGEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEe---C-------CCCEEEEEEEc------cCCeEEEeHHHEEE
Confidence 478999999998213459999998543 0 12468899988 55667788777776
No 160
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.91 E-value=0.48 Score=40.31 Aligned_cols=51 Identities=22% Similarity=0.445 Sum_probs=34.6
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...|...+ .+..-.|.+.||..|...-- .....||.||.....
T Consensus 22 ~~~~C~IC~~~~~~~~---~~~~l~C~H~fh~~Ci~~w~-------~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQ---LLRVLPCNHEFHAKCVDKWL-------KANRTCPICRADSGP 72 (75)
T ss_dssp SCCEETTTTEECCBTC---EEEEETTTEEEETTHHHHHH-------HHCSSCTTTCCCCCC
T ss_pred CCCCCeECCcccCCCC---eEEEECCCCHhHHHHHHHHH-------HcCCcCcCcCCcCCC
Confidence 3456999998776443 44555699999999963221 123589999976643
No 161
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=76.23 E-value=1.3 Score=44.00 Aligned_cols=81 Identities=20% Similarity=0.419 Sum_probs=58.3
Q ss_pred cCCCCCCCCCCCCccccccccc--cccccccccHHhhhcC----------CccccccccccCCCCCCeeeCC--CCCcee
Q 002201 415 PCDGCGMTLPSKSAKKIKASTT--GDQLFCRTCAKLMKSK----------HFCGICKKVWNHSDGGSWVRCD--GCKVWV 480 (954)
Q Consensus 415 ~C~~CG~~~~~~~~~k~~~~w~--~~~~lC~~C~~l~~kg----------~yCpiC~k~y~~~d~~~~VqCd--~C~~Wv 480 (954)
.|.+||...+- .-| -.-.+|..|...|..+ .||-+|. +++++|.|| .|.+-|
T Consensus 38 ~Ct~CG~~~~~--------~~HPlf~v~lC~~Ck~~y~e~~f~~DeDG~~~yC~wC~------~Gg~l~~Cdn~~C~r~F 103 (159)
T 3a1b_A 38 ICISCGSLNVT--------LEHPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICC------GGREVLMCGNNNCCRCF 103 (159)
T ss_dssp SBTTTCCSCCC--------EECSSBSSEECHHHHHHHHHHTTCBCTTSSBSSCTTTS------CCSEEEECSSTTTCCEE
T ss_pred cccCCCCcCcc--------ccCCCccchhhHHHHHHHhhcccccCCCCCcceeeEec------CCCeEEeeCCCCCCCch
Confidence 48888875221 112 2457999998777633 4899996 567899999 899999
Q ss_pred ecccccccccc--ccc-cCCCcccCCcccccc
Q 002201 481 HAECDKISSSH--FKD-LGGSEYYCPACKAKF 509 (954)
Q Consensus 481 H~~Cd~~~~~~--~e~-~~~~~Y~Cp~Cr~k~ 509 (954)
=.+|....-+. ++. .....+.|-.|..+.
T Consensus 104 C~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 104 CVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp EHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred hHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 99999654432 332 457889999999765
No 162
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.47 E-value=0.65 Score=39.27 Aligned_cols=51 Identities=22% Similarity=0.450 Sum_probs=33.4
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...+..... .+.. .|.+.||..|...-- + ....||.||.....
T Consensus 14 ~~~~C~IC~~~~~~~~~--~~~~-~C~H~f~~~Ci~~~~---~----~~~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDE--LGIC-PCKHAFHRKCLIKWL---E----VRKVCPLCNMPVLQ 64 (74)
T ss_dssp CSCBCSSSCCBCCSSSC--EEEE-TTTEEEEHHHHHHHH---H----HCSBCTTTCCBCSS
T ss_pred CCCCCcCCCcccCCCCc--EEEc-CCCCEecHHHHHHHH---H----cCCcCCCcCccccc
Confidence 34569999887764432 2222 599999999963221 1 12489999977644
No 163
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.49 E-value=5.7 Score=34.58 Aligned_cols=56 Identities=23% Similarity=0.244 Sum_probs=42.6
Q ss_pred CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 256 PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 256 ~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
+..|.+||.|-||.. .--|.||+|..-. . .+.+.|.|.+ - +..=|+..+|.|..+.
T Consensus 7 ~~~~kvGd~clA~ws-Dg~~Y~A~I~~v~----~-------~~~~~V~f~D------y-n~e~v~~~~lrplp~~ 62 (74)
T 2equ_A 7 GFDFKAGEEVLARWT-DCRYYPAKIEAIN----K-------EGTFTVQFYD------G-VIRCLKRMHIKAMPED 62 (74)
T ss_dssp CCCCCTTCEEEEECS-SSSEEEEEEEEES----T-------TSSEEEEETT------S-CEEEECGGGEECCCGG
T ss_pred CCCCCCCCEEEEECC-CCCEEEEEEEEEC----C-------CCEEEEEEec------C-CeEEecHHHCeeCChh
Confidence 346999999999994 4569999997543 1 1468999999 3 5566788899998754
No 164
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=72.23 E-value=1.4 Score=44.60 Aligned_cols=65 Identities=9% Similarity=0.083 Sum_probs=43.6
Q ss_pred cCCCccCCCCceEEcCCCCccccCccccCcc---cc-C-CCceeEeccccCc-CCCCcccCCCceeecc-ccCcC
Q 002201 642 CRWVEDWDYNKIIICNRCQIAVHQECYGARN---VQ-D-FTSWVFEIVYTEG-GALKPTDVDSLWVHVT-CAWFQ 709 (954)
Q Consensus 642 C~~~e~~~~~~Li~C~~C~~avH~~CyGv~~---~p-~-~~~W~C~~C~~~g-GaLK~t~~~g~WvHv~-CAlw~ 709 (954)
|+....++ -.+|+|..|..-||..|..... +| + .-.+.|..|...+ .-+++.. -.|+|+. .|++.
T Consensus 10 CG~~~~~~-~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g~E~f~R~~--~~w~~v~~laLyN 81 (177)
T 3rsn_A 10 EENGRQLG-EVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNTYFLRKQ--ANLKEMCLSALAN 81 (177)
T ss_dssp -CTTCCTT-SCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTSSCEEEECC--CCHHHHHHHHHHH
T ss_pred cCCCCCCC-ceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCCcceeEecc--CCHHHHHHHHHHh
Confidence 45544443 5799999999999999998553 33 1 2358899997644 4566663 5799864 34443
No 165
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=71.86 E-value=1 Score=42.01 Aligned_cols=36 Identities=22% Similarity=0.435 Sum_probs=28.0
Q ss_pred CceEEcCCCCccccCccccCccc--c---CCCceeEecccc
Q 002201 651 NKIIICNRCQIAVHQECYGARNV--Q---DFTSWVFEIVYT 686 (954)
Q Consensus 651 ~~Li~C~~C~~avH~~CyGv~~~--p---~~~~W~C~~C~~ 686 (954)
..||.|+.|...||..|.++... + ....|.|..|..
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred cceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 46999999999999999998632 1 125699999964
No 166
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.33 E-value=1.1 Score=38.93 Aligned_cols=55 Identities=15% Similarity=0.215 Sum_probs=35.5
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...|...+.. .+.- .|.+.||..|...--. . ......||.||.....
T Consensus 14 ~~~~C~IC~~~~~~~~~~-~~~~-~CgH~fC~~Ci~~~~~---~-~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLR-PKLL-HCGHTICRQCLEKLLA---S-SINGVRCPFCSKITRI 68 (88)
T ss_dssp SCCBCTTTCCBCCTTSSC-EEEC-SSSCEEEHHHHHHHHH---H-CSSCBCCTTTCCCBCC
T ss_pred CCCCCccCCccccccCCC-eEEC-CCCChhhHHHHHHHHH---c-CCCCcCCCCCCCcccc
Confidence 345699999888755432 2222 6999999999632221 1 1235899999976543
No 167
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=70.76 E-value=7.4 Score=32.32 Aligned_cols=53 Identities=15% Similarity=0.061 Sum_probs=41.1
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecC
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPF 327 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf 327 (954)
..|..|+=|.||-. --.+.||-|+.-. .....++|+|++ .+-.|+.-+.|.+-
T Consensus 2 ~~f~~GedVLarws-DG~fYlGtI~~V~----------~~~~~clV~F~D-------~s~~W~~~kdi~~~ 54 (58)
T 4hcz_A 2 PRLWEGQDVLARWT-DGLLYLGTIKKVD----------SAREVCLVQFED-------DSQFLVLWKDISPA 54 (58)
T ss_dssp CSCCTTCEEEEECT-TSCEEEEEEEEEE----------TTTTEEEEEETT-------SCEEEEEGGGEEEC
T ss_pred CccccCCEEEEEec-CCCEEeEEEEEEe----------cCCCEEEEEEcC-------CCeEEEEhHHcccc
Confidence 46899999999994 4679999998533 113468999988 77889998888764
No 168
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=70.43 E-value=2.7 Score=36.77 Aligned_cols=61 Identities=23% Similarity=0.171 Sum_probs=43.9
Q ss_pred CCCCCCCEEEEecC--CCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCcc
Q 002201 257 EDFYSGDIVWAKSG--KNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVD 329 (954)
Q Consensus 257 ~~f~~GDlVWAK~g--~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e 329 (954)
+.|.+|+.|+++.+ +.--|.||.|++-. . ......|.|.|-|+... -=-||+.++|..+.+
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~-~-------~~~~~~Y~VHY~gwnkr----~DEWV~~~ri~~~~~ 66 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTE-I-------DDGEVLYLVHYYGWNVR----YDEWVKADRIIWPLD 66 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEE-E-------ETTEEEEEEEETTSCCS----SCEEEEGGGEECSSC
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEE-c-------cCCceEEEEEeCCcCCC----ceEecChhhcccccc
Confidence 46999999999984 22358999998633 1 11223699999996443 239999999988764
No 169
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.31 E-value=0.73 Score=38.02 Aligned_cols=53 Identities=23% Similarity=0.486 Sum_probs=35.9
Q ss_pred cCCccccccccccCCC-CCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSD-GGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d-~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
....|+||...|.... ....+.-..|.+.||..|...--. ....||.||....
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-------NANTCPTCRKKIN 67 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHH-------HCSSCTTTCCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHH-------cCCCCCCCCCccC
Confidence 4556999988876542 234555678999999999632211 1468999997653
No 170
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=69.58 E-value=9.5 Score=34.26 Aligned_cols=58 Identities=12% Similarity=0.051 Sum_probs=41.7
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
..|.+||+|-||...---|.+|+|..-. + ..+.+.|+|.+ =.+..=|+...|.|....
T Consensus 9 ~~~kvGd~C~A~ys~Dg~wYrA~I~~i~---~-------~~~~~~V~fiD------YGN~E~V~~~~Lrp~~~~ 66 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSEDGCIYPATIASID---F-------KRETCVVVYTG------YGNREEQNLSDLLSPICE 66 (88)
T ss_dssp CCCCSSCEEEEECTTTCCEEEEEEEEEE---T-------TTTEEEEEETT------TCCEEEEEGGGCBCCC--
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEec---C-------CCCEEEEEEec------CCCEEEEcHHHcccCChh
Confidence 4699999999999213569999997433 0 13568999988 555666888888887543
No 171
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=69.58 E-value=9 Score=33.40 Aligned_cols=58 Identities=21% Similarity=0.114 Sum_probs=44.8
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
..+.+||+|=||...---|++|+|.... + ..+.+.|+|.+ -.+..-|+...|.|....
T Consensus 8 ~~~~~G~~c~A~~s~Dg~wYRA~I~~i~---~-------~~~~~~V~fiD------YGN~e~V~~~~Lr~l~~~ 65 (78)
T 2d9t_A 8 KVWKPGDECFALYWEDNKFYRAEVEALH---S-------SGMTAVVKFTD------YGNYEEVLLSNIKPVQTE 65 (78)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEEC---S-------SSSEEEEEETT------TTEEEEEEGGGEEECCCC
T ss_pred cCCCcCCEEEEEECCCCCEEEEEEEEEe---C-------CCCEEEEEEEc------CCCeEEEcHHHeEeCCHH
Confidence 3589999999998213469999998543 0 13568999988 778899999999999754
No 172
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=68.63 E-value=1.2 Score=41.25 Aligned_cols=67 Identities=25% Similarity=0.574 Sum_probs=40.2
Q ss_pred ccccccccHHhhh-cCCccccccccccCCC------CCCe-------------------eeCCCCCceeecccccccccc
Q 002201 438 DQLFCRTCAKLMK-SKHFCGICKKVWNHSD------GGSW-------------------VRCDGCKVWVHAECDKISSSH 491 (954)
Q Consensus 438 ~~~lC~~C~~l~~-kg~yCpiC~k~y~~~d------~~~~-------------------VqCd~C~~WvH~~Cd~~~~~~ 491 (954)
...+|..|...+- ....||+|.+.+...+ ..+. +....|.+.+|..|...--
T Consensus 33 gH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~-- 110 (133)
T 4ap4_A 33 GHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL-- 110 (133)
T ss_dssp CCEEEHHHHHHHHTTCSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHH--
T ss_pred CChhhHHHHHHHHHhCCCCCCCCCcCccccccccccCCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHH--
Confidence 4467888876653 4456888877665432 1112 2344677888888853221
Q ss_pred ccccCCCcccCCcccccccc
Q 002201 492 FKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 492 ~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
.....||.||.....
T Consensus 111 -----~~~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 111 -----KNANTCPTCRKKINH 125 (133)
T ss_dssp -----HHCSBCTTTCCBCCG
T ss_pred -----HcCCCCCCCCCcCCh
Confidence 123699999976643
No 173
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=67.86 E-value=7.8 Score=31.81 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=40.5
Q ss_pred CCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCc
Q 002201 258 DFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFV 328 (954)
Q Consensus 258 ~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~ 328 (954)
.|++||+|=||....--|.+|+|.... + ..+.+.|+|-+ =.+..-|+.+.|.|..
T Consensus 3 ~~~~G~~c~A~~s~Dg~wYrA~I~~i~---~-------~~~~~~V~f~D------YGn~e~v~~~~Lr~~~ 57 (59)
T 1mhn_A 3 QWKVGDKCSAIWSEDGCIYPATIASID---F-------KRETCVVVYTG------YGNREEQNLSDLLSPI 57 (59)
T ss_dssp CCCTTCEEEEECTTTSCEEEEEEEEEE---T-------TTTEEEEEETT------TTEEEEEEGGGCBCTT
T ss_pred cCCcCCEEEEEECCCCCEEEEEEEEEc---C-------CCCEEEEEEEc------CCCEEEEcHHHeeCCC
Confidence 589999999998213469999998433 0 13578999988 5567778888887753
No 174
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=66.79 E-value=1.1 Score=37.38 Aligned_cols=53 Identities=23% Similarity=0.500 Sum_probs=36.3
Q ss_pred CCccccccccccCC-CCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHS-DGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~-d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...+... .....+.-..|.+.+|.+|...-- .....||.||.....
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~-------~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL-------KNANTCPTCRKKINH 63 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHH-------HHCSBCTTTCCBCCC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHH-------HcCCCCCCCCCccCh
Confidence 45699998887653 223455667899999999963221 123589999977643
No 175
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.20 E-value=2.4 Score=37.19 Aligned_cols=54 Identities=24% Similarity=0.541 Sum_probs=33.3
Q ss_pred CCccccccccccCCCCCCeee---CCCCCceeeccccccccccccccCCCcccCCccccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVR---CDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNFE 512 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~Vq---Cd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~~ 512 (954)
...|.||..-|...+ .+|. |.+..++||.+|...=-. ......||.|+......
T Consensus 15 ~~~C~IC~~~~~~~~--~l~~pC~C~Gs~h~fH~~Cl~~Wl~-----~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 15 QDICRICHCEGDDES--PLITPCHCTGSLHFVHQACLQQWIK-----SSDTRCCELCKYEFIME 71 (80)
T ss_dssp SCCCSSSCCCCCSSS--CEECSSSCCSSSCCEETTHHHHHHH-----HHCCSBCSSSCCBCCCC
T ss_pred CCCCeEcCccccCCC--eeEeccccCCcCCeeCHHHHHHHHh-----hCCCCCCCCCCCeeecC
Confidence 456889987765433 3552 223349999999532111 11247999999887553
No 176
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=68.82 E-value=1.3 Score=39.33 Aligned_cols=57 Identities=21% Similarity=0.210 Sum_probs=40.5
Q ss_pred CCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 255 GPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 255 ~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
-|..|.+||.|-||.. .--|.||+|.... . .+.+.|.|.+ +| ..=|+...|.|+.+.
T Consensus 3 ~~~~~kvGd~clAkws-Dg~wY~A~I~~v~----~-------~~~y~V~F~D--Gn-----~E~V~~s~LrPl~~~ 59 (81)
T 2ldm_A 3 MSSEFQINEQVLASWS-DSRFYPAKVTAVN----K-------DGTYTVKFYD--GV-----VQTVKHIHVKAFSKD 59 (81)
Confidence 3678999999999994 3569999998543 1 2358888887 33 333666778888643
No 177
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=64.76 E-value=0.79 Score=37.20 Aligned_cols=53 Identities=23% Similarity=0.474 Sum_probs=36.1
Q ss_pred CCccccccccccCCC-CCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSD-GGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d-~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...+.... ....+.-..|.+.+|.+|...--. ....||.||.....
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-------NANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHH-------HCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHH-------cCCCCCCCCccCCc
Confidence 346999998876531 234555668999999999632221 14589999977643
No 178
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=63.73 E-value=1.7 Score=40.29 Aligned_cols=65 Identities=15% Similarity=0.242 Sum_probs=37.9
Q ss_pred cccccccccHHhhhcCCccccccccccCCCC-CCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 437 GDQLFCRTCAKLMKSKHFCGICKKVWNHSDG-GSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 437 ~~~~lC~~C~~l~~kg~yCpiC~k~y~~~d~-~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
.+...|.-|...+. ..|++|.-.+....+ ...+.-..|.+.||..|.. ..-.....||.||....
T Consensus 35 ~~~d~CaIC~~~~~--~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~-------~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 35 IVVDNCAICRNHIM--DLCIECQANQASATSEECTVAWGVCNHAFHFHCIS-------RWLKTRQVCPLDNREWE 100 (106)
T ss_dssp SCSCCCSSSCSCTT--SCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHH-------HHHTTCSBCSSSCSBCC
T ss_pred CCCCCCccCChhHh--CcCchhhccccccCCccceEeecccCcEECHHHHH-------HHHHcCCcCcCCCCcce
Confidence 34456666654443 357777543322221 2234445799999999952 21123578999998754
No 179
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=67.57 E-value=1.5 Score=39.33 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=45.8
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
..|.+|+.|++..+ --|.+|.|++-. . ......|.|.|-||... -=-||+.++|++|.+.
T Consensus 11 ~~~~~Gekv~~~~~--~~~y~AkIl~i~-~-------~~~~~~YyVHY~GwNkR----~DEWV~~~Rl~k~t~e 70 (85)
T 2lrq_A 11 TLFVDGERVLCFHG--PLIYEAKVLKTK-P-------DATPVEYYIHYAGWSKN----WDEWVPENRVLKYNDD 70 (85)
Confidence 46899999999997 358999999765 1 11234699999996543 2389999999999865
No 180
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=62.11 E-value=14 Score=31.32 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=40.9
Q ss_pred CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCC--ceecC
Q 002201 256 PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRG--LIFPF 327 (954)
Q Consensus 256 ~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~--~i~Pf 327 (954)
+..|++|.-|=|.-. .-||+||.|++-. ...+.++|.|-||+. ..|+ |+... .|+|.
T Consensus 10 ~~~F~vGmkLEa~d~-~~p~~~AtV~~v~----------~~~~~~~VhfdGw~~---~~D~-W~~~dS~~i~Pv 68 (69)
T 3sd4_A 10 GISFEVGAQLEARDR-LKNWYPAHIEDID----------YEEGKVLIHFKRWNH---RYDE-WFCWDSPYLRPL 68 (69)
T ss_dssp TCCCSTTCEEEEECT-TSCEEEEEEEEEE----------TTTTEEEEEETTSCG---GGCE-EEETTCTTEECC
T ss_pred CCCcCCCCEEEEEEC-CCCccccEEEEEe----------ccCCEEEEEeCCCCC---CCCE-EEcCCCCCeeEC
Confidence 346999999988875 5789999998532 013579999999743 3454 98865 46664
No 181
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=61.97 E-value=23 Score=30.22 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=41.3
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFV 328 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~ 328 (954)
..|.+||-|-|.-. --...||.|..-. ...+..+|+|++ +.-.|+.-+.|.++.
T Consensus 12 ~~f~vGddVLA~wt-DGl~Y~gtI~~V~----------~~~gtC~V~F~D-------~s~~w~~~kdi~~~~ 65 (66)
T 2eqj_A 12 CKFEEGQDVLARWS-DGLFYLGTIKKIN----------ILKQSCFIIFED-------SSKSWVLWKDIQTGA 65 (66)
T ss_dssp CCSCTTCEEEEECT-TSCEEEEEEEEEE----------TTTTEEEEEETT-------TEEEEEETTTEECCC
T ss_pred ccccCCCEEEEEEc-cCcEEEeEEEEEc----------cCCcEEEEEEcc-------CCEEEEEeecccccC
Confidence 36999999999972 2468999997433 124678999998 677899988888763
No 182
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=61.91 E-value=14 Score=32.94 Aligned_cols=58 Identities=17% Similarity=0.047 Sum_probs=44.9
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccch
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFV 331 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~ 331 (954)
..+.+||+|=|+....--|+.|+|.... ..+.+.|+|-+ -.++..|+...|.|....+
T Consensus 26 ~~~~~G~~c~a~~~~d~~wyRA~I~~~~-----------~~~~~~V~fvD------yGn~e~v~~~~lr~l~~~f 83 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTNGSWYRARVLGTL-----------ENGNLDLYFVD------FGDNGDCPLKDLRALRSDF 83 (94)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEEC-----------TTSCEEEEETT------TCCEEEECGGGCEECCGGG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEEC-----------CCCeEEEEEEc------CCCeEEEEHHHhhhcCHHH
Confidence 4578999999997113569999998543 12358999988 7789999999999987554
No 183
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=61.27 E-value=20 Score=32.03 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=43.9
Q ss_pred CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCC--ceecCcc
Q 002201 256 PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRG--LIFPFVD 329 (954)
Q Consensus 256 ~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~--~i~Pf~e 329 (954)
+..|.+|.-|=|.-. .-||.||.|..-. -....++|.|-||+ .+-=.|+... +|+|..-
T Consensus 17 ~~~F~vGmkLEA~D~-~~~~~~a~i~~v~----------~~~~~v~VHfdGW~----~~yDeWv~~dS~~I~P~g~ 77 (88)
T 2eqm_A 17 GITFEIGARLEALDY-LQKWYPSRIEKID----------YEEGKMLVHFERWS----HRYDEWIYWDSNRLRPLER 77 (88)
T ss_dssp SCCCCSSCEEEEECT-TSCEEEEEEEEEE----------TTTTEEEEEESSST----TTEEEEEETTSCCEECCCC
T ss_pred cCcCCCCCEEEEEcC-CCCeeEEEEEEEe----------ccCCEEEEEECCCC----CcccEEeeCCCCcEecccc
Confidence 457999999999885 4699999997322 01346999999964 2233799977 8999864
No 184
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.20 E-value=4.3 Score=35.25 Aligned_cols=49 Identities=22% Similarity=0.604 Sum_probs=32.9
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
..|.||..++.+ -+.|..|..-||..|...-- + ....=.||.|+.....
T Consensus 16 ~~C~IC~~~i~~-----g~~C~~C~h~fH~~Ci~kWl---~--~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 16 KICNICHSLLIQ-----GQSCETCGIRMHLPCVAKYF---Q--SNAEPRCPHCNDYWPH 64 (74)
T ss_dssp CBCSSSCCBCSS-----SEECSSSCCEECHHHHHHHS---T--TCSSCCCTTTCSCCCS
T ss_pred CcCcchhhHccc-----CCccCCCCchhhHHHHHHHH---H--hcCCCCCCCCcCcCCC
Confidence 457788777753 35788999999999953111 1 1123689999976644
No 185
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.67 E-value=5 Score=33.55 Aligned_cols=47 Identities=23% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...+.. .+.- .|.+.||..|... +-.....||.||.....
T Consensus 15 ~~~C~IC~~~~~~-----~~~~-~CgH~fC~~Ci~~-------~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 15 VPECAICLQTCVH-----PVSL-PCKHVFCYLCVKG-------ASWLGKRCALCRQEIPE 61 (71)
T ss_dssp CCBCSSSSSBCSS-----EEEE-TTTEEEEHHHHHH-------CTTCSSBCSSSCCBCCH
T ss_pred CCCCccCCcccCC-----CEEc-cCCCHHHHHHHHH-------HHHCCCcCcCcCchhCH
Confidence 3468999876532 2333 5999999999532 11234799999987643
No 186
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=59.68 E-value=19 Score=32.95 Aligned_cols=59 Identities=17% Similarity=0.055 Sum_probs=45.7
Q ss_pred CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccch
Q 002201 256 PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFV 331 (954)
Q Consensus 256 ~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~ 331 (954)
+..+.+||+|=|+....--|+.|+|.... + .+.+.|+|-+ -.++..|+...|.|....+
T Consensus 30 ~~~~~~G~~c~a~~~~d~~wyRA~V~~~~---~--------~~~~~V~fvD------yGn~e~v~~~~Lr~l~~~f 88 (110)
T 2diq_A 30 DLTVHVGDIVAAPLPTNGSWYRARVLGTL---E--------NGNLDLYFVD------FGDNGDCPLKDLRALRSDF 88 (110)
T ss_dssp CCCCCTTCEEEECCTTTCSCEEEEECCCC---S--------SSCEEEEETT------TCCEEEECGGGCEECCHHH
T ss_pred CCCCCCCCEEEEEECCCCeEEEEEEEEEC---C--------CCeEEEEEEe------CCCeEEEehHHhhcCcHHH
Confidence 44688999999998213469999998654 1 1468999988 7789999999999987543
No 187
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=59.49 E-value=4.4 Score=34.33 Aligned_cols=37 Identities=14% Similarity=0.405 Sum_probs=23.3
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccHHhhh
Q 002201 414 RPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMK 450 (954)
Q Consensus 414 ~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~ 450 (954)
..|..|+..+.+....-....||.+.+.|..|.+...
T Consensus 6 ~~C~~C~~~I~~~~v~a~~~~wH~~CF~C~~C~~~L~ 42 (73)
T 1wig_A 6 SGCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFA 42 (73)
T ss_dssp CSCSSSCCCCSSCCBCCSSCCBCTTTSCCSSSCCCCC
T ss_pred CCcccCCCEecCeeEEeCCCCCCCCcCEeCCCCCCCC
Confidence 4577777666654444445567777777777765544
No 188
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=58.88 E-value=2.5 Score=38.15 Aligned_cols=50 Identities=20% Similarity=0.396 Sum_probs=36.2
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
.....|+||...+. +-+.|..|.+.||..|...--. .....||.||....
T Consensus 20 ~~~~~C~IC~~~~~-----~p~~~~~CgH~FC~~Ci~~~~~------~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 20 AEVFRCFICMEKLR-----DARLCPHCSKLCCFSCIRRWLT------EQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHHTBCTTTCSBCS-----SEEECTTTCCEEEHHHHHHHHH------HTCSBCTTTCCBCC
T ss_pred CCCCCCccCCcccc-----CccccCCCCChhhHHHHHHHHH------HCcCCCCCCCCcCC
Confidence 34567999987764 3678899999999999632221 11289999998764
No 189
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=58.00 E-value=17 Score=31.63 Aligned_cols=56 Identities=21% Similarity=0.157 Sum_probs=40.4
Q ss_pred CCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCcc
Q 002201 258 DFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVD 329 (954)
Q Consensus 258 ~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e 329 (954)
.+++||++=||...---|.+|+|.... + ..+.+.|+|-+ =.+..-|+...|.|...
T Consensus 17 ~~kvGd~C~A~ys~Dg~wYRA~I~~i~---~-------~~~~~~V~fvD------YGN~e~V~~~~Lr~l~~ 72 (77)
T 3pnw_C 17 MWKPGDECFALYWEDNKFYRAEVEALH---S-------SGMTAVVKFID------YGNYEEVLLSNIKPIQT 72 (77)
T ss_dssp TCCTTCEEEEEETTTTEEEEEEEEEEC---T-------TSSEEEEEETT------TCCEEEEEGGGEECC--
T ss_pred CCCcCCEEEEEECCCCCEEEEEEEEEe---C-------CCCEEEEEEEc------CCCeEEEeHHHeEECCh
Confidence 588999999998213569999997533 0 12468899988 55677788888888754
No 190
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.85 E-value=2.5 Score=35.56 Aligned_cols=49 Identities=18% Similarity=0.282 Sum_probs=33.7
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...+.+ -+.-..|.+-||..|....-. ....||.||.....
T Consensus 14 ~~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~~-------~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 14 PYILCSICKGYLID-----ATTITECLHTFCKSCIVRHFY-------YSNRCPKCNIVVHQ 62 (72)
T ss_dssp GGGSCTTTSSCCSS-----CEECSSSCCEECHHHHHHHHH-------HCSSCTTTCCCCCS
T ss_pred CCCCCCCCChHHHC-----cCEECCCCCHHHHHHHHHHHH-------cCCcCCCcCcccCc
Confidence 34569999876653 345568999999999632221 14789999977644
No 191
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=57.82 E-value=4.1 Score=36.35 Aligned_cols=50 Identities=20% Similarity=0.327 Sum_probs=34.6
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
.....|+||...+.+ -+....|.+.||..|....- .....||.|+.....
T Consensus 20 ~~~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~-------~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 20 DDLLRCGICFEYFNI-----AMIIPQCSHNYCSLCIRKFL-------SYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHHTBCTTTCSBCSS-----EEECTTTCCEEEHHHHHHHH-------TTCCBCTTTCCBCCG
T ss_pred CCCCCcccCChhhCC-----cCEECCCCCHhhHHHHHHHH-------HCCCCCCCCCCcCCh
Confidence 345679999877753 34446799999999963221 124799999977643
No 192
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=57.63 E-value=5.1 Score=34.74 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=29.1
Q ss_pred CccCCCCCCCCC-CCCccccccccccccccccccHHhhhcCCcc
Q 002201 413 KRPCDGCGMTLP-SKSAKKIKASTTGDQLFCRTCAKLMKSKHFC 455 (954)
Q Consensus 413 c~~C~~CG~~~~-~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yC 455 (954)
-..|..|+..+. .....-....||.+.+.|..|.+....+.|+
T Consensus 15 ~~~C~~C~~~I~~~e~v~a~~~~wH~~CF~C~~C~~~L~~~~~~ 58 (82)
T 2co8_A 15 GDLCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYE 58 (82)
T ss_dssp SCBCSSSCCBCCTTTBCCBTTBCCBTTTCBCSSSCCBCCTTSEE
T ss_pred CCCCcccCCCcccceEEEECCCeeCCCcCEEcCCCCCcCCCcee
Confidence 456888888773 3323334457998999999998776655554
No 193
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.63 E-value=2.9 Score=34.74 Aligned_cols=47 Identities=17% Similarity=0.333 Sum_probs=32.1
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...+.. .-..|.+.||..|... +-.....||.||.....
T Consensus 14 ~~~~C~IC~~~~~~-------~~~~CgH~fc~~Ci~~-------~~~~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 14 DEEECCICMDGRAD-------LILPCAHSFCQKCIDK-------WSDRHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCSSSCCSCCS-------EEETTTEEECHHHHHH-------SSCCCSSCHHHHHCTTC
T ss_pred CCCCCeeCCcCccC-------cccCCCCcccHHHHHH-------HHHCcCcCCCcCCcccC
Confidence 34569999876543 2236899999999632 22246899999977643
No 194
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.78 E-value=6.8 Score=32.57 Aligned_cols=51 Identities=20% Similarity=0.396 Sum_probs=34.1
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...+.+ -+.- .|.+.||..|...--. .......||.||.....
T Consensus 19 ~~~~C~IC~~~~~~-----~~~~-~CgH~fC~~Ci~~~~~----~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 19 EEVICPICLDILQK-----PVTI-DCGHNFCLKCITQIGE----TSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCBCTTTCSBCSS-----EEEC-TTCCEEEHHHHHHHCS----SSCSCCCCSSSCCCCCC
T ss_pred cCCEeccCCcccCC-----eEEc-CCCChhhHHHHHHHHH----cCCCCCCCCCCCCcCCc
Confidence 45579999876652 2333 8999999999632221 11356899999977643
No 195
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=56.02 E-value=8.2 Score=34.34 Aligned_cols=50 Identities=18% Similarity=0.425 Sum_probs=32.2
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCcccccccccc
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICKKVWN 463 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~k~y~ 463 (954)
.|+ ..|-.|..|+..+.+..- ...++..+|..|+... -+..|..|++...
T Consensus 28 ~~H--~~CF~C~~C~~~L~~~~~-----~~~~g~~yC~~cy~~~-~~~~C~~C~~~I~ 77 (101)
T 2cup_A 28 FWH--DTCFRCAKCLHPLANETF-----VAKDNKILCNKCTTRE-DSPKCKGCFKAIV 77 (101)
T ss_dssp EEE--TTTCCCSSSCCCTTSSCC-----EEETTEEECHHHHTTC-CCCBCSSSCCBCC
T ss_pred Chh--hcCCcccccCCCCCcCee-----ECcCCEEEChhHhhhh-cCCccccCCCccc
Confidence 565 688888888888854211 2234678888888543 2456777766554
No 196
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.85 E-value=4 Score=35.48 Aligned_cols=30 Identities=30% Similarity=0.703 Sum_probs=24.7
Q ss_pred eeEeeeccCCCeeeecCCcCcccchhhhhh
Q 002201 736 KICVICKQIHGSCTQCCKCSTYYHAMCASR 765 (954)
Q Consensus 736 ~~C~iC~~~~Ga~IqC~~C~~aFHv~CA~~ 765 (954)
..|.||....-..+.|..|...||..|...
T Consensus 16 ~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCETCGIRMHLPCVAK 45 (74)
T ss_dssp CBCSSSCCBCSSSEECSSSCCEECHHHHHH
T ss_pred CcCcchhhHcccCCccCCCCchhhHHHHHH
Confidence 569999976545678999999999999854
No 197
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=55.44 E-value=3.2 Score=40.71 Aligned_cols=48 Identities=21% Similarity=0.493 Sum_probs=33.9
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
...||||...+.+ -+....|.+.||..|....- ......||.|+....
T Consensus 54 ~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~------~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 54 ELMCPICLDMLKN-----TMTTKECLHRFCADCIITAL------RSGNKECPTCRKKLV 101 (165)
T ss_dssp HHBCTTTSSBCSS-----EEEETTTCCEEEHHHHHHHH------HTTCCBCTTTCCBCC
T ss_pred CCCCcccChHhhC-----cCEeCCCCChhHHHHHHHHH------HhCcCCCCCCCCcCC
Confidence 3459999876653 46667899999999963221 123688999997763
No 198
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=55.39 E-value=8.2 Score=35.62 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=45.9
Q ss_pred CCCCCCCEEEEecC---CCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 257 EDFYSGDIVWAKSG---KNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 257 ~~f~~GDlVWAK~g---~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
..|.+|+-|.+.-+ ++--++.|.|++-...-++. ......|+|.|-||+.+- | -||+.++|..|.+.
T Consensus 18 ~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~---~~~~~~Y~VHY~GWn~rw---D-EWV~edRilk~~ee 87 (101)
T 3m9q_A 18 PLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEH---GLRFYEYKIHFQGWRPSY---D-RAVRATVLLKDTEE 87 (101)
T ss_dssp CCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTT---SCEEEEEEEEETTSCGGG---C-EEECGGGEEECCHH
T ss_pred CcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCcc---ccCceEEEEEeCCCCcCc---e-eecCHHHcccCCHH
Confidence 35999999999882 12568899998654100000 011236999999977652 2 89999999999765
No 199
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=55.27 E-value=8.3 Score=36.11 Aligned_cols=66 Identities=17% Similarity=0.165 Sum_probs=45.5
Q ss_pred CCCCCCCEEEEecCCC----CCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 257 EDFYSGDIVWAKSGKN----YPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~----yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
..|..|+-|.+.-| . --|++|.|++-...-++.- .....|+|.|.||... -| -||+.++|+.|.+.
T Consensus 18 ~~F~~GEkVLc~hg-d~~k~~~lYeAKIl~v~~~~~~~g---~~~~~Y~VHY~GWn~~---wD-EWV~e~rllk~~ee 87 (110)
T 3m9p_A 18 FKFHSGEKVLCFEP-DPTKARVLYDAKIVDVIVGKDEKG---RKIPEYLIHFNGWNRS---WD-RWAAEDHVLRDTDE 87 (110)
T ss_dssp CCSCTTCEEEEECS-CTTSCCCEEEEEEEEEEEEECTTC---CEEEEEEEEETTSCGG---GC-EEEEGGGEEECCHH
T ss_pred CcccCCCEEEEEcC-CCCCCCCceeeEEEEEEeccCccc---ccceEEEEEECCCCcc---hh-hccCHhhhhcCCHH
Confidence 36999999999866 2 3588999986541100100 0013699999997654 22 89999999999765
No 200
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=55.10 E-value=6.3 Score=35.74 Aligned_cols=51 Identities=16% Similarity=0.352 Sum_probs=35.8
Q ss_pred hhcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 449 MKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 449 ~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
......||||...+.+ -+....|.+.||..|....- .....||.|+.....
T Consensus 12 ~~~~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~-------~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFID-----ATTIIECLHSFCKTCIVRYL-------ETSKYCPICDVQVHK 62 (108)
T ss_dssp HGGGTBCTTTSSBCSS-----EEEETTTCCEEEHHHHHHHH-------TSCSBCTTTCCBSCS
T ss_pred cCCcCCCccCChHHhC-----cCEeCCCCChhhHHHHHHHH-------HhCCcCcCCCccccc
Confidence 3456679999877642 45666899999999963221 124899999977643
No 201
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=54.51 E-value=12 Score=37.11 Aligned_cols=49 Identities=16% Similarity=0.440 Sum_probs=30.0
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCcccccccccc
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICKKVWN 463 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~k~y~ 463 (954)
.|+ +.|-+|..|+..+.+.. . ..++..+|..|+...- +..|..|++...
T Consensus 82 ~wH--~~CF~C~~C~~~L~~~~-----f-~~~g~~yC~~~y~~~f-~~kC~~C~~~I~ 130 (182)
T 2jtn_A 82 HWH--SKCLKCSDCHVPLAERC-----F-SRGESVYCKDDFFKRF-GTKCAACQLGIP 130 (182)
T ss_dssp EEC--SSTTSCTTTCCCCSSCC-----E-EETTEEECHHHHHHTT-SCCCTTTCCCCC
T ss_pred eEc--cccCccCCCCCccCCCc-----e-eECCEeeecCcccccc-ccccccCCCccC
Confidence 465 57777888887776531 1 2346677888875432 455777766443
No 202
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.17 E-value=3 Score=36.62 Aligned_cols=50 Identities=20% Similarity=0.377 Sum_probs=30.9
Q ss_pred CCCcccccCCCccCCCCceEE-c--CCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIII-C--NRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~-C--~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
..+.|.||.+....+ +.|+. | .+..-.||+.|+-.=.... +...|..|+.
T Consensus 14 ~~~~C~IC~~~~~~~-~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~-~~~~CplCr~ 66 (80)
T 2d8s_A 14 SQDICRICHCEGDDE-SPLITPCHCTGSLHFVHQACLQQWIKSS-DTRCCELCKY 66 (80)
T ss_dssp TSCCCSSSCCCCCSS-SCEECSSSCCSSSCCEETTHHHHHHHHH-CCSBCSSSCC
T ss_pred CCCCCeEcCccccCC-CeeEeccccCCcCCeeCHHHHHHHHhhC-CCCCCCCCCC
Confidence 467899999765433 45542 2 2334899999984322211 3357888876
No 203
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=54.04 E-value=9.1 Score=35.72 Aligned_cols=54 Identities=22% Similarity=0.412 Sum_probs=35.7
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcC-CccccccccccC
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSK-HFCGICKKVWNH 464 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg-~yCpiC~k~y~~ 464 (954)
.|+ ..|-+|..|+..+...+.. .-+.++..+|..|+...... ..|..|++....
T Consensus 24 ~wH--~~CF~C~~C~~~L~~~~~~---~~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 24 YWH--EDCLSCDLCGCRLGEVGRR---LYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp EEE--TTTCBCTTTCCBCSSTTCC---EEEETTEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred ccc--HHHcccCcCCCccccCCCe---EEEECCEEeecCchhhhCCCccChhhcCCccCc
Confidence 576 7899999999888521111 13446788999998765422 268888876543
No 204
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=53.57 E-value=2 Score=39.32 Aligned_cols=37 Identities=24% Similarity=0.692 Sum_probs=26.3
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCccccccc
Q 002201 414 RPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICKK 460 (954)
Q Consensus 414 ~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~k 460 (954)
..|+.|...+ .|.+.+..|+.|.+.+.+.-+||-|++
T Consensus 33 ~~CP~Cq~eL----------~~~g~~~hC~~C~~~f~~~a~CPdC~q 69 (101)
T 2jne_A 33 LHCPQCQHVL----------DQDNGHARCRSCGEFIEMKALCPDCHQ 69 (101)
T ss_dssp CBCSSSCSBE----------EEETTEEEETTTCCEEEEEEECTTTCS
T ss_pred ccCccCCCcc----------eecCCEEECccccchhhccccCcchhh
Confidence 4577777665 355566778888877777778888764
No 205
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=53.55 E-value=27 Score=31.64 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=45.8
Q ss_pred CCCcCCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCcee
Q 002201 251 DGLYGPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIF 325 (954)
Q Consensus 251 ~~~~~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~ 325 (954)
...+.+..|.+|+.|+++-+ --|.+|.|++-. . ......|.|.|-|+ +.+-=.||+..+|-
T Consensus 16 ~~~~~~~~~~vG~kv~v~~~--~~~y~AkIl~ir-~-------~~~~~~YyVHY~g~----NkRlDEWV~~~rl~ 76 (92)
T 2ro0_A 16 KKINSVDDIIIKCQCWVQKN--DEERLAEILSIN-T-------RKAPPKFYVHYVNY----NKRLDEWITTDRIN 76 (92)
T ss_dssp ECCSCTTSCCTTCEEEEEET--TEEEEEEEEEEE-C-------SSSSCEEEEEETTS----CTTSCEEEEGGGEE
T ss_pred ccccccccccCCCEEEEEEC--CEEEEEEEEEEE-E-------cCCCcEEEEEeCCc----CcccccccCHhHcc
Confidence 35677788999999999975 569999998644 1 11235799999993 34445899999984
No 206
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=53.52 E-value=7.3 Score=32.82 Aligned_cols=55 Identities=20% Similarity=0.454 Sum_probs=34.2
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....||||...+.+. .+ ..|.+.||..|....-..-.........||.||.....
T Consensus 11 ~~~~C~IC~~~~~~p----~~--l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 11 EEVTCPICLELLTEP----LS--LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCEETTTTEECSSC----CC--CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cCCCCcCCCcccCCe----eE--CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 345699998877532 11 26899999999743222100011347899999977643
No 207
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=52.98 E-value=6.1 Score=39.01 Aligned_cols=64 Identities=17% Similarity=0.265 Sum_probs=45.1
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEeccccCcCCCCcccCCCceeec
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYTEGGALKPTDVDSLWVHV 703 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~~gGaLK~t~~~g~WvHv 703 (954)
+...|.+|...-..-.|.=..|..|...|-..|-.. . +....|+|..|......++.+ |.|++-
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~-~-~~~~~W~C~vC~k~rel~~kS---GeWf~~ 130 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHA-H-PEEQGWLCDPCHLARVVKIGS---LEWYYQ 130 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEEC-C-SSSSSCEEHHHHHHHHHHHHH---CHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccc-c-CCCCcEeeHHHHHHHHHHHhc---cHHHHH
Confidence 467899999875444567889999999999999632 2 333889999998633322222 566654
No 208
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=52.34 E-value=2.9 Score=37.12 Aligned_cols=39 Identities=31% Similarity=0.669 Sum_probs=30.1
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCccccccccc
Q 002201 414 RPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICKKVW 462 (954)
Q Consensus 414 ~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~k~y 462 (954)
..|+.|+..+ .|.+.+..|..|.+.+...-|||-|++..
T Consensus 3 ~~CP~C~~~l----------~~~~~~~~C~~C~~~~~~~afCPeCgq~L 41 (81)
T 2jrp_A 3 ITCPVCHHAL----------ERNGDTAHCETCAKDFSLQALCPDCRQPL 41 (81)
T ss_dssp CCCSSSCSCC----------EECSSEEECTTTCCEEEEEEECSSSCSCC
T ss_pred CCCCCCCCcc----------ccCCCceECccccccCCCcccCcchhhHH
Confidence 4588888776 35556778999999988888999998643
No 209
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.31 E-value=3.5 Score=35.40 Aligned_cols=46 Identities=17% Similarity=0.397 Sum_probs=32.0
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
...|+||...+.. -+. ..|.+.||..|....-. ....||.|+....
T Consensus 15 ~~~C~IC~~~~~~-----p~~-~~CgH~fC~~Ci~~~~~-------~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 15 PFRCFICRQAFQN-----PVV-TKCRHYFCESCALEHFR-------ATPRCYICDQPTG 60 (81)
T ss_dssp CSBCSSSCSBCCS-----EEE-CTTSCEEEHHHHHHHHH-------HCSBCSSSCCBCC
T ss_pred CCCCcCCCchhcC-----eeE-ccCCCHhHHHHHHHHHH-------CCCcCCCcCcccc
Confidence 3469999877643 233 57999999999632221 2578999998875
No 210
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=51.72 E-value=19 Score=34.66 Aligned_cols=66 Identities=17% Similarity=0.375 Sum_probs=46.6
Q ss_pred CCCCcccccCCCccCCCCceEEcCCCCccccCccccCccc-cCCCceeEeccccCcCCCCcccCCCceee
Q 002201 634 WTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNV-QDFTSWVFEIVYTEGGALKPTDVDSLWVH 702 (954)
Q Consensus 634 ~~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~-p~~~~W~C~~C~~~gGaLK~t~~~g~WvH 702 (954)
.....|.+|...-..-.|.=..|..|...|-..|-+.... +....|+|..|......++. .|.|++
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~rel~~k---SG~Wf~ 119 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQREVWKR---SGAWFF 119 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHHHHHHHH---TSHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHHHHHHHh---hhHHHH
Confidence 4677899999876444456689999999999999776532 33368999999863333332 256766
No 211
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=51.44 E-value=6.4 Score=33.25 Aligned_cols=48 Identities=25% Similarity=0.450 Sum_probs=31.9
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...|+||...+.+ -+.-..|.+.||..|....-. ......||.||...
T Consensus 15 ~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~~-----~~~~~~CP~Cr~~~ 62 (74)
T 2yur_A 15 ELLCLICKDIMTD-----AVVIPCCGNSYCDECIRTALL-----ESDEHTCPTCHQND 62 (74)
T ss_dssp GGSCSSSCCCCTT-----CEECSSSCCEECTTHHHHHHH-----HSSSSCCSSSCCSS
T ss_pred CCCCcCCChHHhC-----CeEcCCCCCHHHHHHHHHHHH-----hcCCCcCCCCCCcC
Confidence 4569999877653 344445999999999632221 11257999999753
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=51.36 E-value=11 Score=42.99 Aligned_cols=31 Identities=23% Similarity=0.206 Sum_probs=28.0
Q ss_pred CCceEEEecCccCceeeeccccCCCCeEEEe
Q 002201 897 HDRVCFGRSGIHGWGLFARRNIQEGEMVLEY 927 (954)
Q Consensus 897 ~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY 927 (954)
-..|++..+...|.||+|+++|++|+.|++=
T Consensus 6 ~~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e 36 (433)
T 3qww_A 6 RGGLERFCSAGKGRGLRALRPFHVGDLLFSC 36 (433)
T ss_dssp STTEEEEECTTSCEEEEESSCBCTTCEEEEE
T ss_pred CCcEEEeecCCCcCeEEECCCCCCCCEEEec
Confidence 3679999999999999999999999998764
No 213
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=50.64 E-value=17 Score=35.58 Aligned_cols=76 Identities=20% Similarity=0.491 Sum_probs=49.9
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCccccccccccCCCCCCeeeCCCCCceeecccc
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECD 485 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd 485 (954)
.|+ +.|-+|..|+..+.+.. -..++..+|..|+...- +..|..|++..... +++. ..=++..|.+|
T Consensus 28 ~wH--~~CF~C~~C~~~L~~~~------f~~~g~~yC~~~y~~~f-~~~C~~C~~~I~~~---~~v~-~a~~~~~H~~C- 93 (169)
T 2rgt_A 28 HWH--SKCLKCSDCHVPLAERC------FSRGESVYCKDDFFKRF-GTKCAACQLGIPPT---QVVR-RAQDFVYHLHC- 93 (169)
T ss_dssp EEC--TTTSBCTTTCCBCCSCC------EESSSCEECHHHHHHHH-SCBCTTTCCBCCTT---SEEE-EETTEEEEGGG-
T ss_pred EEc--cccCccCCCCCcCCCCC------cccCCeeeecccccccc-cccccccccccCCC---cEEE-EcCCceEeeCC-
Confidence 576 78999999999987632 13457899999986543 56788888755432 2221 12245667776
Q ss_pred ccccccccccCCCcccCCcccccc
Q 002201 486 KISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 486 ~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
|.|..|....
T Consensus 94 --------------F~C~~C~~~L 103 (169)
T 2rgt_A 94 --------------FACVVCKRQL 103 (169)
T ss_dssp --------------CBCTTTCCBC
T ss_pred --------------CcCCCCCCCC
Confidence 6777776443
No 214
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=50.62 E-value=12 Score=36.34 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=45.3
Q ss_pred CCCCCCEEEEecCCCCCcccEEEeCCCCC------CCh------hh------hccCC------------CCeEEEEEccc
Q 002201 258 DFYSGDIVWAKSGKNYPYWPAIVIDPMTQ------APD------VV------LRSCI------------PDAACVMFFGH 307 (954)
Q Consensus 258 ~f~~GDlVWAK~g~~yPwWPa~V~dp~~~------~p~------~v------~~~~~------------~~~~~V~FFG~ 307 (954)
.|.+|+.|.|.-| --||+|.|+.-... -++ .+ ..... ...|.|.|-||
T Consensus 9 ~f~~gekvl~~hg--~llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GW 86 (136)
T 2k3y_A 9 EFALGGRVLAFHG--PLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQGW 86 (136)
T ss_dssp SCCTTSEEEEECS--SCEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCTTS
T ss_pred ccCCCCEEEEEEC--CeeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeCCc
Confidence 5999999999998 55999999854310 000 00 00000 12799999996
Q ss_pred cCCCCCCcEEEeeCCceecCccc
Q 002201 308 CGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 308 s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
... -=-||...+|..|.+.
T Consensus 87 n~r----wDEWV~~dRil~~~ee 105 (136)
T 2k3y_A 87 KSS----WDEWVGYDRIRAYNEE 105 (136)
T ss_dssp CGG----GCEEEETTTEEESCHH
T ss_pred CCc----ceeeecHhhhhhCCHh
Confidence 544 2389999999999865
No 215
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=50.22 E-value=45 Score=31.43 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=47.0
Q ss_pred CCCCCEEEEecC-CCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 259 FYSGDIVWAKSG-KNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 259 f~~GDlVWAK~g-~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
-.+|-+|=.... ++-.|.||.|+.|.. .+.+. -+ ...++|+=|= +..|+=|.++.|.-|...
T Consensus 11 e~lGkVV~V~~~~kk~~WfPALVVsPs~--~d~v~-vk-Kd~~LVRSFk------DgKf~sV~rkdv~e~~~~ 73 (117)
T 2yrv_A 11 ELLGKVVSVVSATERTEWYPALVISPSC--NDDIT-VK-KDQCLVRSFI------DSKFYSIARKDIKEVDIL 73 (117)
T ss_dssp SSTTSEEEEECSSCSSCEEEEEEECCSS--CSSCC-CC-TTCEEEEESS------SCCEEEECTTTEECCCST
T ss_pred HHcCcEEEEecCCCCCceeeeEEECCCC--CCCee-ec-cceEEEEeec------cCeEEEEEhHhhhhcccc
Confidence 346888888883 356899999999972 33442 22 5679999999 888999999999988644
No 216
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=49.91 E-value=4.9 Score=33.03 Aligned_cols=49 Identities=18% Similarity=0.265 Sum_probs=32.8
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...+.+ -+.-..|.+.+|..|...-- + ....||.||.....
T Consensus 4 ~~~~C~IC~~~~~~-----~~~~~~C~H~fc~~Ci~~~~---~----~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 4 VAERCPICLEDPSN-----YSMALPCLHAFCYVCITRWI---R----QNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCCCS-----CEEETTTTEEESTTHHHHHH---H----HSCSTTTTCCCCCC
T ss_pred CCCCCeeCCccccC-----CcEecCCCCeeHHHHHHHHH---h----CcCcCcCCChhhHh
Confidence 34579999876542 23445799999999963221 1 23689999977643
No 217
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=49.77 E-value=11 Score=43.71 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=29.2
Q ss_pred CCceEEEecCccCceeeeccccCCCCeEEEecc
Q 002201 897 HDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRG 929 (954)
Q Consensus 897 ~~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~G 929 (954)
...|.+..+...|.||+|+++|++|+.|+.-.-
T Consensus 6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P 38 (490)
T 3n71_A 6 MENVEVFTSEGKGRGLKATKEFWAADVIFAERA 38 (490)
T ss_dssp CTTEEEEECSSSCEEEEESSCBCTTCEEEEECC
T ss_pred CCceEEEecCCCCceEEeccCCCCCCEEEecCC
Confidence 457999999999999999999999999987443
No 218
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=49.68 E-value=6.7 Score=37.34 Aligned_cols=45 Identities=20% Similarity=0.378 Sum_probs=29.7
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
..||||...+.+ -+. ..|.+.||..|... +-.....||.||....
T Consensus 54 ~~C~iC~~~~~~-----~~~-~~CgH~fc~~Ci~~-------~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 54 LQCIICSEYFIE-----AVT-LNCAHSFCSYCINE-------WMKRKIECPICRKDIK 98 (138)
T ss_dssp SBCTTTCSBCSS-----EEE-ETTSCEEEHHHHHH-------HTTTCSBCTTTCCBCC
T ss_pred CCCcccCcccCC-----ceE-CCCCCCccHHHHHH-------HHHcCCcCCCCCCcCC
Confidence 358999876642 222 25899999999531 1223567999997663
No 219
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=48.17 E-value=34 Score=29.17 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=39.9
Q ss_pred CCCCCCCCCEEEEec-CCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecC
Q 002201 255 GPEDFYSGDIVWAKS-GKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPF 327 (954)
Q Consensus 255 ~~~~f~~GDlVWAK~-g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf 327 (954)
-+..|.+||.|-||- | .--+.||+|.+-. .....|.|.|=. .+.-=+..+.|.|-
T Consensus 9 p~~~f~vgd~VmaRW~G-d~~yYparItSit----------s~~~~Y~VkfKd-------gT~e~L~~kDIKp~ 64 (68)
T 2dig_A 9 PSRKFADGEVVRGRWPG-SSLYYEVEILSHD----------STSQLYTVKYKD-------GTELELKENDIKSG 64 (68)
T ss_dssp CCCSSCSSCEEEEECTT-TCCEEEEEEEEEE----------TTTTEEEEECTT-------SCEEEEETTTEECC
T ss_pred CceEeecCCEEEEEccC-CccceEEEEEEec----------cCCceEEEEecC-------CCEEEechhccccC
Confidence 356799999999999 7 7889999997554 112357887644 45555777777774
No 220
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=47.22 E-value=10 Score=35.56 Aligned_cols=66 Identities=17% Similarity=0.179 Sum_probs=43.9
Q ss_pred CCCCCCEEEEec-C--CCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 258 DFYSGDIVWAKS-G--KNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 258 ~f~~GDlVWAK~-g--~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
.|..|+.|-+== + ++--.+-|.|++.. . .... .......|+|.|-||+.+-| -||+..+|++|.+.
T Consensus 19 ~F~~gEkVLc~h~d~~kg~llYeAKIl~v~-~-~~~~-~~~~~~~Y~VHY~GWn~~WD----EWV~~drllk~nee 87 (110)
T 3oa6_A 19 KFHSGEKVLCFEPDPTKARVLYDAKIVDVI-V-GKDE-KGRKIPEYLIHFNGWNRSWD----RWAAEDHVLRDTDE 87 (110)
T ss_dssp CSCTTCEEEEECSCTTSCCCEEEEEEEEEE-E-EECT-TCCEEEEEEEEETTSCGGGC----EEEEGGGEEECCHH
T ss_pred ccCCCCEEEEEecCCCCCcccEEEEEEEEE-e-ccCC-cCCcccEEEEEECCcCcchh----hccChhhhhcCCHH
Confidence 599999999854 1 12457899998643 1 0000 00112259999999877643 59999999999765
No 221
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.71 E-value=13 Score=32.69 Aligned_cols=35 Identities=26% Similarity=0.727 Sum_probs=27.4
Q ss_pred CCCcccccCCCccCC-CCceEEcCCCCccccCccccC
Q 002201 635 TTERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv 670 (954)
....|.+|... .|. ..+-+.|..|...+|..|...
T Consensus 27 ~pt~C~~C~~~-lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 27 QPTFCSVCKDF-VWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp SCCCCSSSCCC-CCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCcChhhcChh-hccccccccccCCcCCeeChhhhhh
Confidence 34689999875 343 346789999999999999865
No 222
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.63 E-value=8.6 Score=32.91 Aligned_cols=40 Identities=13% Similarity=0.326 Sum_probs=29.0
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccHHhhhcCC
Q 002201 414 RPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKH 453 (954)
Q Consensus 414 ~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~ 453 (954)
..|..|+..+.+....-....||.+-+.|..|.+....+.
T Consensus 16 ~~C~~C~~~I~~~~v~a~~~~wH~~CF~C~~C~~~L~~~~ 55 (81)
T 1v6g_A 16 TRCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGD 55 (81)
T ss_dssp CBCTTTCCBCCSCCEEETTEEECTTTSSCSSSCCCCCSSS
T ss_pred CcCccccCEeccceEEECCceeCccCCccccCCCCCCCCC
Confidence 4788888877755444455689989999999977665444
No 223
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=45.54 E-value=6.7 Score=39.36 Aligned_cols=53 Identities=17% Similarity=0.381 Sum_probs=31.4
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCC-cccccccccc
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKH-FCGICKKVWN 463 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~-yCpiC~k~y~ 463 (954)
.|+ +.|-+|..|+..+...+.. .-...+..+|..|+....... .|..|++...
T Consensus 27 ~wH--~~CF~C~~C~~~L~~~g~~---~~~~~g~~yC~~cy~~~~~~~~~C~~C~~~I~ 80 (188)
T 1rut_X 27 YWH--SRCLKCSSCQAQLGDIGTS---SYTKSGMILCRNDYIRLFGNSGACSACGQSIP 80 (188)
T ss_dssp EEC--GGGCBCTTTCCBHHHHCSE---EEEETTEEECHHHHHHHHSCCEECTTTCCEEC
T ss_pred Eec--ccCcccCCCCcccccCCce---EEEeCCccccccccccccccCCccccCCCccc
Confidence 465 5778888888776520011 123356778888876554322 6777877554
No 224
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=45.43 E-value=6 Score=32.36 Aligned_cols=51 Identities=18% Similarity=0.319 Sum_probs=32.8
Q ss_pred Cccccccc-cccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 453 HFCGICKK-VWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 453 ~yCpiC~k-~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
..||||.. .+.......++ ..|.+-+|.+|....- ......||.|+.....
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~--~~CgH~fC~~Ci~~~~------~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMV--NVCGHTLCESCVDLLF------VRGAGNCPECGTPLRK 55 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEE--CTTCCCEEHHHHHHHH------HTTSSSCTTTCCCCSS
T ss_pred CcCCcCCCCccCCCccCeec--CCCCCHhHHHHHHHHH------HcCCCcCCCCCCcccc
Confidence 46999988 66543221122 4799999999963221 1235789999977643
No 225
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=45.14 E-value=40 Score=29.49 Aligned_cols=52 Identities=15% Similarity=0.077 Sum_probs=38.8
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceec
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFP 326 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~P 326 (954)
..|..|+=|.||-. --.+.+|-|+.-. .....++|+|++ ++-.|+.-+.|.+
T Consensus 25 ~~f~eGeDVLarws-DGlfYLGTI~kV~----------~~~e~ClV~F~D-------~S~~W~~~kdi~~ 76 (79)
T 2m0o_A 25 PRLWEGQDVLARWT-DGLLYLGTIKKVD----------SAREVCLVQFED-------DSQFLVLWKDISP 76 (79)
T ss_dssp CCCCTTCEEEBCCT-TSCCCEEEEEEEE----------TTTTEEEEEETT-------SCEEEEETTTBCC
T ss_pred ceeccCCEEEEEec-CCCEEeEEEEEec----------cCCCEEEEEEcC-------CCeEEEEeecccc
Confidence 46999999999993 3468999998332 013468998887 7788998777765
No 226
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=45.04 E-value=13 Score=31.05 Aligned_cols=34 Identities=24% Similarity=0.662 Sum_probs=26.7
Q ss_pred CCcccccCCCccCC-CCceEEcCCCCccccCccccC
Q 002201 636 TERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 636 ~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv 670 (954)
...|.+|...- |. ..+-+.|..|...+|..|...
T Consensus 23 pt~C~~C~~~l-~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 23 PTFCEHCGTLL-WGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCBCSSSCCBC-CCSSSCSEEESSSCCEECTTTTTT
T ss_pred CcCchhcChhh-eecCCcccccCCCCCccCHhHHhh
Confidence 46799998753 43 346789999999999999864
No 227
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=44.67 E-value=7.6 Score=35.76 Aligned_cols=33 Identities=27% Similarity=0.678 Sum_probs=20.6
Q ss_pred CCeeeCCCCCceeeccccccccccccccCCCcccCCc
Q 002201 468 GSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPA 504 (954)
Q Consensus 468 ~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~ 504 (954)
..|||||.|.+|=-+. ..+.. .......|+|..
T Consensus 26 ~~WVQCD~C~KWRrLP-~~~~~---~~~~pd~W~C~m 58 (100)
T 2l7p_A 26 SAWVRCDDCFKWRRIP-ASVVG---SIDESSRWICMN 58 (100)
T ss_dssp SEEEECTTTCCEEEEC-HHHHT---TSTTSSCCCGGG
T ss_pred CeEEeeCCCCccccCC-hhHcc---ccCCCCCceeCC
Confidence 5699999999997765 22211 111236788855
No 228
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=44.58 E-value=46 Score=28.27 Aligned_cols=55 Identities=15% Similarity=0.087 Sum_probs=41.4
Q ss_pred CCCCCCCCEEEEec-CCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCc
Q 002201 256 PEDFYSGDIVWAKS-GKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFV 328 (954)
Q Consensus 256 ~~~f~~GDlVWAK~-g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~ 328 (954)
+..|.+||.|-||- | .--+.||+|.+-. .....|.|.|=. .+.-=+..+.|.|-.
T Consensus 7 ~~~~~vgd~VmaRW~G-d~~yYparI~Si~----------s~~~~Y~V~fKd-------gT~e~L~~kDIkp~~ 62 (66)
T 2l8d_A 7 NRKYADGEVVMGRWPG-SVLYYEVQVTSYD----------DASHLYTVKYKD-------GTELALKESDIRLQS 62 (66)
T ss_dssp SSSSCSSCEEEEECTT-SSCEEEEEEEEEE----------TTTTEEEEEETT-------SCEEEEEGGGEECSS
T ss_pred ceEeecCCEEEEEcCC-CccceEEEEEEec----------cCCceEEEEecC-------CCEEeechhccccch
Confidence 56799999999999 7 7889999997554 112358887754 455668888888873
No 229
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=44.39 E-value=12 Score=29.30 Aligned_cols=35 Identities=23% Similarity=0.672 Sum_probs=27.2
Q ss_pred CCCcccccCCCccCC-CCceEEcCCCCccccCccccC
Q 002201 635 TTERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv 670 (954)
....|.+|+..- |. ..+-+.|..|+..+|..|...
T Consensus 10 ~pt~C~~C~~~l-~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLL-WGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBC-CSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCCcCCCCcee-eccCCccCEeCCCCCeECHHHhhh
Confidence 346799998753 43 347789999999999999753
No 230
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=43.99 E-value=11 Score=42.03 Aligned_cols=56 Identities=32% Similarity=0.429 Sum_probs=35.0
Q ss_pred cccccccccCCCCCCeeeCC--CCCceeecccccccccc----ccccCCCcccCCccccccc
Q 002201 455 CGICKKVWNHSDGGSWVRCD--GCKVWVHAECDKISSSH----FKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 455 CpiC~k~y~~~d~~~~VqCd--~C~~WvH~~Cd~~~~~~----~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
|+||-..+.+++.-.-..|+ .|.+-||..|...--.. -......--.||.|+....
T Consensus 311 CaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 311 CNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred CcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 77777666544444456788 89999999997321000 0112234578999997653
No 231
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.90 E-value=5.7 Score=33.74 Aligned_cols=54 Identities=19% Similarity=0.412 Sum_probs=34.0
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...+.+. +. ..|.+.||..|....-... ........||.|+.....
T Consensus 18 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~~~~-~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLELLTQP-----LS-LDCGHSFCQACLTANHKKS-MLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCSCCSSC-----BC-CSSSCCBCTTHHHHHHHHH-HHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCcccCCc-----ee-CCCCCHHHHHHHHHHHHHh-hcCCCCCcCCCCCCccCH
Confidence 345699998877532 12 2699999999974322110 012346899999977643
No 232
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=43.89 E-value=6.9 Score=43.61 Aligned_cols=34 Identities=21% Similarity=0.527 Sum_probs=26.0
Q ss_pred CCCcccccCCCccC-CCCceEEcC--CCCccccCccc
Q 002201 635 TTERCAVCRWVEDW-DYNKIIICN--RCQIAVHQECY 668 (954)
Q Consensus 635 ~~~~C~VC~~~e~~-~~~~Li~C~--~C~~avH~~Cy 668 (954)
....|+||...... +.-.-..|+ .|+..||..|+
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL 343 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCL 343 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGG
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHH
Confidence 45679999987654 222346798 89999999998
No 233
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=43.77 E-value=13 Score=33.94 Aligned_cols=47 Identities=19% Similarity=0.511 Sum_probs=31.8
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
...|+||...+... .+. .|.+-||..|....- ....+.||.||....
T Consensus 15 ~~~C~iC~~~~~~p----~~~--~CgH~fC~~Ci~~~~------~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 15 ECQCGICMEILVEP----VTL--PCNHTLCKPCFQSTV------EKASLCCPFCRRRVS 61 (115)
T ss_dssp HHBCTTTCSBCSSC----EEC--TTSCEECHHHHCCCC------CTTTSBCTTTCCBCH
T ss_pred CCCCccCCcccCce----eEc--CCCCHHhHHHHHHHH------hHCcCCCCCCCcccC
Confidence 34599998776532 222 799999999953222 223589999997764
No 234
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=43.74 E-value=5.2 Score=37.71 Aligned_cols=68 Identities=16% Similarity=0.238 Sum_probs=2.0
Q ss_pred cccccccccccHHhhhcCCccccccccccCCCC-CCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 435 TTGDQLFCRTCAKLMKSKHFCGICKKVWNHSDG-GSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 435 w~~~~~lC~~C~~l~~kg~yCpiC~k~y~~~d~-~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
|...--.|.-|...+. .-|++|.-.+....+ ...+.-..|.+.||..|... .-...-.||.||.....
T Consensus 44 wd~~~d~CaICl~~~~--~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~-------Wl~~~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 44 WDIVVDNCAICRNHIM--DLCIECQANQASATSEECTVAWGVCNHAFHFHCISR-------WLKTRQVCPLDNREWEF 112 (117)
T ss_dssp ECCCC-------------------------------------------------------------------------
T ss_pred ecCCCCcCeECChhhc--CcChhhhcccccccccccccccCCcCceEcHHHHHH-------HHHcCCcCCCCCCeeee
Confidence 3334456666655554 246666543322222 22333447999999999522 22235689999987643
No 235
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=43.27 E-value=16 Score=33.90 Aligned_cols=51 Identities=18% Similarity=0.403 Sum_probs=36.2
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCccccccccccC
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICKKVWNH 464 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~k~y~~ 464 (954)
.|+ +.|-.|..|+..+.+. . ....++..+|..|+... -+..|..|++...+
T Consensus 25 ~~H--~~CF~C~~C~~~L~~~--~---f~~~~g~~yC~~cy~~~-~~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 25 NWH--LKHFCCFDCDSILAGE--I---YVMVNDKPVCKPCYVKN-HAVVCQGCHNAIDP 75 (126)
T ss_dssp EEC--GGGSBCTTTCCBCTTS--E---EEEETTEEEEHHHHHHH-SCCBCTTTCSBCCT
T ss_pred Ccc--CCCCCcCCCCCCCCcC--E---EEeECCEEechHHhCcC-cCccCcccCCcCCc
Confidence 565 6889999999988752 1 12335788999998654 35678888887654
No 236
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=43.26 E-value=14 Score=32.01 Aligned_cols=34 Identities=26% Similarity=0.738 Sum_probs=26.8
Q ss_pred CCcccccCCCccCC-CCceEEcCCCCccccCccccC
Q 002201 636 TERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 636 ~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv 670 (954)
...|.+|... .|. ..+-+.|..|...+|..|...
T Consensus 34 pt~C~~C~~~-lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 34 PTFCSVCHEF-VWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CEECSSSCCE-ECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CcCccccChh-hccccccccCcCCCCCcCCHhHHhh
Confidence 4579999874 333 346789999999999999864
No 237
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=43.09 E-value=25 Score=35.23 Aligned_cols=46 Identities=22% Similarity=0.330 Sum_probs=32.0
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCCcccccc
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKHFCGICK 459 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yCpiC~ 459 (954)
.|+ +.|-+|..|+..+.... ....++..+|..|+...- +..|..|+
T Consensus 29 ~wH--~~CF~C~~C~~~L~~~~-----~~~~~g~~yC~~cy~~~f-~~~c~~c~ 74 (192)
T 1b8t_A 29 SFH--KSCFLCMVCKKNLDSTT-----VAVHGDEIYCKSCYGKKY-GPKGKGKG 74 (192)
T ss_dssp EEC--TTTCBCTTTCCBCCSSS-----EEEETTEEEEHHHHHHHH-SCCCCCCC
T ss_pred eec--CCCCcCcccCCcCCCCe-----eEecCCEeeChhhhHhhc-Cccccccc
Confidence 576 79999999999987642 134467899999987653 33344443
No 238
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.73 E-value=28 Score=28.32 Aligned_cols=28 Identities=21% Similarity=0.562 Sum_probs=20.8
Q ss_pred ccccccccHHhhh--cCCccccccccccCC
Q 002201 438 DQLFCRTCAKLMK--SKHFCGICKKVWNHS 465 (954)
Q Consensus 438 ~~~lC~~C~~l~~--kg~yCpiC~k~y~~~ 465 (954)
...+|..|...+- ....||+|.+.+..+
T Consensus 34 gH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 34 GHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp SCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred CCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 4568999988775 345799999876543
No 239
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=42.61 E-value=13 Score=29.27 Aligned_cols=31 Identities=19% Similarity=0.509 Sum_probs=25.8
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccC
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv 670 (954)
...|.+|+.. .| +-+.|..|+..+|..|...
T Consensus 14 pt~C~~C~~~-l~---qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 14 LAFCDICQKF-LL---NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CEECTTSSSE-EC---SEEECTTTTCCBCSTTSSS
T ss_pred CcCCCCcccc-cc---cCCEeCCCCCeEChhHHhh
Confidence 4689999875 34 6789999999999999864
No 240
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.54 E-value=7.3 Score=31.94 Aligned_cols=48 Identities=21% Similarity=0.320 Sum_probs=32.3
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...+... +. ..|.+.+|..|....- ......||.|+.....
T Consensus 15 ~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~------~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 15 KYKCEKCHLVLCSP-----KQ-TECGHRFCESCMAALL------SSSSPKCTACQESIVK 62 (66)
T ss_dssp CEECTTTCCEESSC-----CC-CSSSCCCCHHHHHHHH------TTSSCCCTTTCCCCCT
T ss_pred CCCCCCCChHhcCe-----eE-CCCCCHHHHHHHHHHH------HhCcCCCCCCCcCCCh
Confidence 44599998877532 11 4799999999963221 1346789999977643
No 241
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=42.39 E-value=44 Score=28.65 Aligned_cols=51 Identities=14% Similarity=0.260 Sum_probs=40.1
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecC
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPF 327 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf 327 (954)
..|..||=|.||.. -=.+..|-|++-. ...++|+|.+ ++-.|+..+.|.-.
T Consensus 14 ~~~~~geDVL~rw~-DG~fYLGtIVd~~------------~~~ClV~FeD-------~S~~Wv~~kdi~kl 64 (69)
T 2xk0_A 14 VTYALQEDVFIKCN-DGRFYLGTIIDQT------------SDQYLIRFDD-------QSEQWCEPDKLRKL 64 (69)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEC------------SSCEEEEETT-------CCEEEECTTTEECS
T ss_pred cccccCCeEEEEec-CCCEEEEEEEecC------------CceEEEEecC-------CcceeeeHHHHHhh
Confidence 57999999999994 3568999998644 3458898876 77889998877654
No 242
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=42.29 E-value=5 Score=39.91 Aligned_cols=55 Identities=16% Similarity=0.350 Sum_probs=41.6
Q ss_pred CCCcccccCCCccCCCCceEEcC--CCCccccCccccCcc-------ccCCCceeEecccc--CcCCCCcc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICN--RCQIAVHQECYGARN-------VQDFTSWVFEIVYT--EGGALKPT 694 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~--~C~~avH~~CyGv~~-------~p~~~~W~C~~C~~--~gGaLK~t 694 (954)
.+..|.+|.++ +.|+.|+ .|..+|-..|.-... +.....|.|-.|.. ..|.|.+-
T Consensus 78 ~~~yC~wC~~G-----g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~l~~ll~~R 143 (159)
T 3a1b_A 78 YQSYCTICCGG-----REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRR 143 (159)
T ss_dssp SBSSCTTTSCC-----SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSCEETTEEBC
T ss_pred CcceeeEecCC-----CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCccHHHHhhhh
Confidence 35689999987 6999999 799999999984432 22237899999987 34566554
No 243
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=41.65 E-value=10 Score=31.62 Aligned_cols=35 Identities=23% Similarity=0.660 Sum_probs=26.9
Q ss_pred CCCcccccCCCccCC-CCceEEcCCCCccccCccccC
Q 002201 635 TTERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv 670 (954)
....|++|... .|. ..+-+.|..|...+|..|...
T Consensus 19 ~pt~C~~C~~~-l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 19 SPTFCDHCGSL-LWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp SCCBCTTTCCB-CCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCcccccChh-hhccCceeeECCCCCCeEchhHhhh
Confidence 34689999875 243 246789999999999999754
No 244
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=41.60 E-value=18 Score=40.93 Aligned_cols=30 Identities=23% Similarity=0.217 Sum_probs=26.7
Q ss_pred CCceEEEecCccCceeeeccccCCCCeEEE
Q 002201 897 HDRVCFGRSGIHGWGLFARRNIQEGEMVLE 926 (954)
Q Consensus 897 ~~~~~v~~S~ihG~Glfa~~~i~~g~~ViE 926 (954)
...|..+-+...|.||+|+++|++|+.|+.
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~ 33 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFR 33 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEe
Confidence 456777779999999999999999999987
No 245
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=41.39 E-value=10 Score=30.05 Aligned_cols=34 Identities=21% Similarity=0.739 Sum_probs=21.9
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAK 508 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k 508 (954)
-|++|+-+|++..+.. ..+++++ .+|.||.|...
T Consensus 6 ~C~vCGyvyd~~~Gd~--------------------t~f~~lP-~dw~CP~Cg~~ 39 (46)
T 6rxn_A 6 VCNVCGYEYDPAEHDN--------------------VPFDQLP-DDWCCPVCGVS 39 (46)
T ss_dssp EETTTCCEECGGGGTT--------------------CCGGGSC-TTCBCTTTCCB
T ss_pred ECCCCCeEEeCCcCCC--------------------cchhhCC-CCCcCcCCCCc
Confidence 4888888887654322 1244443 46999999854
No 246
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=40.93 E-value=13 Score=39.24 Aligned_cols=58 Identities=16% Similarity=0.332 Sum_probs=38.0
Q ss_pred HHHHHhhccccccccCCCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 619 LLAFLQEKYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 619 l~~~l~~~~~pv~~~~~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
+...+.+.|.- ....|.+|...-. .=+.|..|+..+|..|+..-.... +.-.|..|..
T Consensus 168 l~~~l~~~~~~-----~i~~C~iC~~iv~----~g~~C~~C~~~~H~~C~~~~~~~~-~~~~CP~C~~ 225 (238)
T 3nw0_A 168 MEQYIRETYPD-----AVKICNICHSLLI----QGQSCETCGIRMHLPCVAKYFQSN-AEPRCPHCND 225 (238)
T ss_dssp HHHHHHHHCTT-----TCCBCTTTCSBCS----SCEECSSSCCEECHHHHHHHTTTC-SSCBCTTTCC
T ss_pred HHHHHHHhcCC-----CCCcCcchhhHHh----CCcccCccChHHHHHHHHHHHHhC-CCCCCCCCCC
Confidence 33445555541 3457999998754 337899999999999995532222 3446777753
No 247
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=40.51 E-value=14 Score=30.91 Aligned_cols=35 Identities=23% Similarity=0.645 Sum_probs=27.4
Q ss_pred CCCcccccCCCccCC-CCceEEcCCCCccccCccccC
Q 002201 635 TTERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv 670 (954)
....|.+|...- |. ..+-+.|..|...+|..|...
T Consensus 23 ~pt~C~~C~~~l-~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 23 TPTYCYECEGLL-WGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp SCCCCTTTCCCC-CSSCCEEEEETTTCCEECTTHHHH
T ss_pred CCcChhhcChhh-cccCcceeEcCCCCCeeCHHHHhh
Confidence 356899998753 43 346789999999999999854
No 248
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=39.15 E-value=15 Score=31.85 Aligned_cols=53 Identities=19% Similarity=0.407 Sum_probs=34.9
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....||||.-.+...+. ..+.| .|.+-|+..|.... +....+.||.||.....
T Consensus 10 ~~~~CpICle~~~~~d~-~~~p~-~CGH~fC~~Cl~~~------~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDI-NFFPC-TCGYQICRFCWHRI------RTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCBCTTTCCBCCTTTT-TCCSS-TTSCCCCHHHHHHH------TTSSCSBCTTTCCBCSS
T ss_pred cCCcCCccCccCccccc-ccccc-CCCCCcCHHHHHHH------HhcCCCCCCCCCCccCC
Confidence 34569999886643322 23445 68999999996322 12346999999987754
No 249
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.64 E-value=19 Score=31.77 Aligned_cols=35 Identities=20% Similarity=0.592 Sum_probs=27.4
Q ss_pred CCCcccccCCCccCC-CCceEEcCCCCccccCccccC
Q 002201 635 TTERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv 670 (954)
....|.+|...- |. ..+-+.|..|...+|..|...
T Consensus 27 ~pt~C~~C~~~l-~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 27 SPTFCDHCGSLL-YGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SCCBCSSSCCBC-CCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCcCCcccCccc-cccccCCCcCCCcCCccCHhHHhh
Confidence 346899998753 43 346789999999999999864
No 250
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=38.49 E-value=17 Score=31.25 Aligned_cols=33 Identities=21% Similarity=0.616 Sum_probs=26.9
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccC
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv 670 (954)
...+|+.|+..- ..+-+.|..|+..+|..|...
T Consensus 34 ~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 34 GPGWCDLCGREV---LRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SCCBCTTTSSBC---SSCCEECTTSSCEECTGGGGG
T ss_pred CCcchhhhhHHH---HhCcCccCCCCCeechhhhcc
Confidence 456899998764 356789999999999999853
No 251
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.81 E-value=1.1e+02 Score=25.67 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=40.8
Q ss_pred CCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecC
Q 002201 255 GPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPF 327 (954)
Q Consensus 255 ~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf 327 (954)
++..|..|+=|-|+=. --.+.||-|..-. . .....+|+|++ ++-.|+.-+.|.+.
T Consensus 4 g~~~f~eGqdVLarWs-DGlfYlgtV~kV~-~---------~~~~ClV~FeD-------~s~~wv~~kdi~~~ 58 (63)
T 2e5q_A 4 GSSGLTEGQYVLCRWT-DGLYYLGKIKRVS-S---------SKQSCLVTFED-------NSKYWVLWKDIQHA 58 (63)
T ss_dssp SCCCCCTTCEEEEECT-TSCEEEEEECCCC-S---------TTSEEEEEETT-------SCEEEEEGGGEECC
T ss_pred CccceecCCEEEEEec-CCCEEEEEEEEEe-c---------CCCEEEEEEcc-------CceeEEEeeccccc
Confidence 4668999999999963 2468999998554 1 13457888887 66779988877765
No 252
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=36.98 E-value=20 Score=29.34 Aligned_cols=40 Identities=28% Similarity=0.836 Sum_probs=25.0
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccccc-ccccCCCcccCCccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSH-FKDLGGSEYYCPACKAK 508 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~-~e~~~~~~Y~Cp~Cr~k 508 (954)
-|.+|+-+|++..+.. . .+|.... +++++ .+|.||.|...
T Consensus 5 ~C~vCGyvYd~~~Gdp-------------~-~gi~pGt~fe~lP-~dw~CP~Cg~~ 45 (54)
T 4rxn_A 5 TCTVCGYIYDPEDGDP-------------D-DGVNPGTDFKDIP-DDWVCPLCGVG 45 (54)
T ss_dssp EETTTCCEECTTTCBG-------------G-GTBCTTCCGGGSC-TTCBCTTTCCB
T ss_pred ECCCCCeEECCCcCCc-------------c-cCcCCCCChhHCC-CCCcCcCCCCc
Confidence 4889999998765410 0 1233322 55554 57999999864
No 253
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=36.91 E-value=8.4 Score=35.06 Aligned_cols=52 Identities=19% Similarity=0.122 Sum_probs=32.3
Q ss_pred CCCcccccCCCccCC-------------CCceEEcCCCCccccCccccCcccc--CCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWD-------------YNKIIICNRCQIAVHQECYGARNVQ--DFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~-------------~~~Li~C~~C~~avH~~CyGv~~~p--~~~~W~C~~C~~ 686 (954)
.++.|.||.+.-... ....+.--.|+-.||..|+..-... ....-.|..|+.
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 467899998753221 1123334579999999998543210 013567999987
No 254
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.64 E-value=10 Score=31.61 Aligned_cols=14 Identities=29% Similarity=0.665 Sum_probs=7.0
Q ss_pred CCCccCCCCCCCCC
Q 002201 411 KDKRPCDGCGMTLP 424 (954)
Q Consensus 411 k~c~~C~~CG~~~~ 424 (954)
+.|-.|..|+..+.
T Consensus 33 ~~CF~C~~C~~~L~ 46 (72)
T 1x4l_A 33 NDCFNCKKCSLSLV 46 (72)
T ss_dssp TTTCBCSSSCCBCT
T ss_pred cccCEeccCCCcCC
Confidence 44555555555443
No 255
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=36.63 E-value=67 Score=30.83 Aligned_cols=68 Identities=15% Similarity=0.169 Sum_probs=43.0
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCC---CCCC----Chh----hh-------------------ccCCCCeEEEEEcc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDP---MTQA----PDV----VL-------------------RSCIPDAACVMFFG 306 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp---~~~~----p~~----v~-------------------~~~~~~~~~V~FFG 306 (954)
+.|.+|+.|-+--| .- ...|.|++- .... ++. +- .....-.|+|.|.|
T Consensus 6 p~f~~gE~VlcfHg-~~-~YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~G 83 (130)
T 3e9g_A 6 QEFALGGRCLAFHG-PL-MYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFFIHYQG 83 (130)
T ss_dssp -CCCTTCEEEEEET-TE-EEEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEEEEETT
T ss_pred ccccCCCEEEEEeC-Cc-ceeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEEEEeCC
Confidence 36889999998887 33 588888533 2110 000 00 00113379999999
Q ss_pred ccCCCCCCcEEEeeCCceecCccc
Q 002201 307 HCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 307 ~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
|..+ -=-||+.++|+.|.+.
T Consensus 84 Wn~~----WDEWV~e~rvlk~~ee 103 (130)
T 3e9g_A 84 WKSS----WDEWVGYDRIRAYNEE 103 (130)
T ss_dssp SCGG----GCEEEETTTEECSSHH
T ss_pred CCCC----hhhccCHhhhhccCHH
Confidence 6643 2289999999999865
No 256
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=36.39 E-value=13 Score=33.06 Aligned_cols=35 Identities=23% Similarity=0.423 Sum_probs=25.0
Q ss_pred CCcccccCCCcc-CCCCceEEcCCCCccccCccccC
Q 002201 636 TERCAVCRWVED-WDYNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 636 ~~~C~VC~~~e~-~~~~~Li~C~~C~~avH~~CyGv 670 (954)
...|.||...=. ...-.-+.|..|++.||..|+-.
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~ 73 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKES 73 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHH
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHh
Confidence 358999987421 11124568999999999999843
No 257
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=35.88 E-value=26 Score=31.32 Aligned_cols=35 Identities=20% Similarity=0.552 Sum_probs=27.7
Q ss_pred CCceEEcCCCCc-cccCccccCccccCCCceeEecccc
Q 002201 650 YNKIIICNRCQI-AVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 650 ~~~Li~C~~C~~-avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
.-.||.|..|+. ..|..|..+...+ ..|.|..|..
T Consensus 43 ~W~L~lC~~Cgs~gtH~~Cs~l~~~~--~~weC~~C~~ 78 (85)
T 1weq_A 43 RWRLILCATCGSHGTHRDCSSLRPNS--KKWECNECLP 78 (85)
T ss_dssp TTBCEECSSSCCCEECSGGGTCCTTC--SCCCCTTTSC
T ss_pred CEEEEeCcccCCchhHHHHhCCcCCC--CCEECCcCcc
Confidence 347999999975 6899999875433 6899999974
No 258
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=35.13 E-value=63 Score=29.37 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=45.1
Q ss_pred CCcCCCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCcee
Q 002201 252 GLYGPEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIF 325 (954)
Q Consensus 252 ~~~~~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~ 325 (954)
..+.+..|.+|+.|+++-+ --|.+|.|+.-. . ......|.|.|-|+ +.+-=.||+..+|-
T Consensus 19 ~~~~~~~~~vG~kv~v~~~--~~~yeAeIl~ir-~-------~~g~~~YYVHY~g~----NkRlDEWV~~~RI~ 78 (94)
T 2rnz_A 19 SHMSVDDIIIKCQCWVQKN--DEERLAEILSIN-T-------RKAPPKFYVHYVNY----NKRLDEWITTDRIN 78 (94)
T ss_dssp CSSCGGGCCTTEEEEEECS--SCEEEEEEEEEE-C-------SSSSCEEEEECTTS----CSTTCEEEETTTBC
T ss_pred CccccccccCCCEEEEEEC--CEEEEEEEEEEE-E-------cCCCcEEEEEeCCc----CcccccccCHHHcc
Confidence 4666678999999999975 569999998654 1 11234799999993 34555899999984
No 259
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=34.66 E-value=9.6 Score=35.91 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=1.0
Q ss_pred CCCcccccCCCccC-------------CCCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDW-------------DYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~-------------~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
.++.|+||...-.. .++..+.-..|+-.||..|...-.. ..-.|..|+.
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~---~~~~CP~Cr~ 108 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK---TRQVCPLDNR 108 (117)
T ss_dssp CC---------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHH---cCCcCCCCCC
Confidence 45789999875332 1111222236889999999632211 1234777754
No 260
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=34.59 E-value=28 Score=33.32 Aligned_cols=57 Identities=18% Similarity=0.077 Sum_probs=36.1
Q ss_pred CCCCCCEEEEecCC----CCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccc
Q 002201 258 DFYSGDIVWAKSGK----NYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDF 330 (954)
Q Consensus 258 ~f~~GDlVWAK~g~----~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~ 330 (954)
.|..||-|=+=... ..-||||.|..-. +..+.|.|-|+ ++.---||...+|.|-..+
T Consensus 60 ~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~k------------g~f~~V~y~~~----~~~~~EiV~~~rlR~~n~~ 120 (128)
T 3h8z_A 60 EITEGDEVEVYSRANEQEPCGWWLARVRMMK------------GDFYVIEYAAC----DATYNEIVTLERLRPVNPN 120 (128)
T ss_dssp CCCTTCEEEEEECC---CCCEEEEEEEEEEE------------TTEEEEEETTC--------CEEECGGGEEECCCC
T ss_pred CCCCCCEEEEEecCCCCCcCccEEEEEEEee------------CCEEEEEEcCC----CCCcceEEehhheEeCCCC
Confidence 58889987444420 1139999997432 34577777662 2455689999999988654
No 261
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=34.42 E-value=46 Score=31.84 Aligned_cols=70 Identities=20% Similarity=0.224 Sum_probs=35.8
Q ss_pred CCCCCCEEE--EecCCCCCcccEEEeCCCC-CCCh---hhhccCC------CCeEEEEEccccCCCCCCcEEEeeCCcee
Q 002201 258 DFYSGDIVW--AKSGKNYPYWPAIVIDPMT-QAPD---VVLRSCI------PDAACVMFFGHCGDVNQRDYAWVKRGLIF 325 (954)
Q Consensus 258 ~f~~GDlVW--AK~g~~yPwWPa~V~dp~~-~~p~---~v~~~~~------~~~~~V~FFG~s~~~~s~dyaWv~~~~i~ 325 (954)
+|.+||+|= -|.| -+=|.|.+..- .+-- .|+++.. ++.+=|-||=-...=--.+-+|++..+|.
T Consensus 7 ~~~~g~~v~~~yKTG----~YigeI~e~~~~~~lVkVlaVlKHP~QGDLHnP~q~dvpfFHERkALs~~Ek~~ip~~~vk 82 (130)
T 1y71_A 7 TFEIGEIVTGIYKTG----KYIGEVTNSRPGSYVVKVLAVLKHPVQGDLHNVKQANVPFFHERRALAFREQTNIPEQMVK 82 (130)
T ss_dssp CCCTTCEEEEEETTE----EEEEEEEEEETTEEEEEEEEEEECCCC---------------CCCCCCTTCEEEEEGGGEE
T ss_pred cCCccceeEEEEecc----eeEEEEEeecCCeEEEEEEEEecCCCccCCCCCCcCCCcceeehhhccHHHHhcCCHHhcc
Confidence 589999994 4556 45677764220 1111 1223332 55677889983332245567999999999
Q ss_pred cCccch
Q 002201 326 PFVDFV 331 (954)
Q Consensus 326 Pf~e~~ 331 (954)
||.+..
T Consensus 83 ~yegei 88 (130)
T 1y71_A 83 KYEGEI 88 (130)
T ss_dssp ECCSCC
T ss_pred ccCCCC
Confidence 998763
No 262
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=34.32 E-value=13 Score=34.53 Aligned_cols=49 Identities=20% Similarity=0.446 Sum_probs=32.8
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....||||...+.+. +. ..|.+-||..|....- ....+.||.||.....
T Consensus 51 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~------~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRP-----IT-TVCQHNVCKDCLDRSF------RAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSE-----EE-CTTSCEEEHHHHHHHH------HTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCc-----EE-eeCCCcccHHHHHHHH------hHCcCCCCCCCccCCC
Confidence 345699998776522 22 2799999999963221 1345799999977744
No 263
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=34.26 E-value=24 Score=30.23 Aligned_cols=30 Identities=30% Similarity=0.753 Sum_probs=21.4
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
.+|-.|+... ....++|..|..-+|..|..
T Consensus 36 t~C~~C~~~l----~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 36 GWCDLCGREV----LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp CBCTTTSSBC----SSCCEECTTSSCEECTGGGG
T ss_pred cchhhhhHHH----HhCcCccCCCCCeechhhhc
Confidence 3444444443 34578999999999999963
No 264
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=34.17 E-value=7 Score=36.30 Aligned_cols=35 Identities=14% Similarity=0.422 Sum_probs=28.6
Q ss_pred ceEEcCCCCccccCccccCcc--------ccCCCceeEecccc
Q 002201 652 KIIICNRCQIAVHQECYGARN--------VQDFTSWVFEIVYT 686 (954)
Q Consensus 652 ~Li~C~~C~~avH~~CyGv~~--------~p~~~~W~C~~C~~ 686 (954)
.+|.|+.|..=+|..|.|+.. .|+...|.|..|..
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 378999999999999999863 24445799999975
No 265
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=33.75 E-value=16 Score=30.78 Aligned_cols=48 Identities=10% Similarity=0.079 Sum_probs=32.5
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
....||||...+.+. +.. .|.+.++..|....- ......||.|+....
T Consensus 7 ~~~~C~IC~~~~~~P-----v~~-~CgH~fc~~Ci~~~~------~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDP-----VIV-STGQTYERSSIQKWL------DAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSE-----EEE-TTTEEEEHHHHHHHH------TTTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCC-----EEc-CCCCeecHHHHHHHH------HHCcCCCCCCcCCCC
Confidence 345799998877532 222 699999999953221 223688999997653
No 266
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=33.57 E-value=15 Score=33.06 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=32.7
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFN 510 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~ 510 (954)
....|+||...+.+. +. ..|.+.||..|....-. .......||.|+....
T Consensus 20 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~~----~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 20 KILECPICLELIKEP-----VS-TKCDHIFCKFCMLKLLN----QKKGPSQCPLCKNDIT 69 (112)
T ss_dssp HHTSCSSSCCCCSSC-----CB-CTTSCCCCSHHHHHHHH----SSSSSCCCTTTSCCCC
T ss_pred CCCCCcccChhhcCe-----EE-CCCCCHHHHHHHHHHHH----hCCCCCCCcCCCCcCC
Confidence 345799998877532 12 37999999999632221 1123589999997654
No 267
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=33.30 E-value=16 Score=31.35 Aligned_cols=16 Identities=31% Similarity=0.904 Sum_probs=13.7
Q ss_pred CCeeeCC--CCCceeecc
Q 002201 468 GSWVRCD--GCKVWVHAE 483 (954)
Q Consensus 468 ~~~VqCd--~C~~WvH~~ 483 (954)
..||||| .|.+|=-+.
T Consensus 16 ~~WVQCd~p~C~KWR~LP 33 (69)
T 2e61_A 16 LVWVQCSFPNCGKWRRLC 33 (69)
T ss_dssp CCEEECSSTTTCCEEECC
T ss_pred CeEEEeCccccCcccCCc
Confidence 5699999 999997764
No 268
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=32.92 E-value=13 Score=39.19 Aligned_cols=32 Identities=31% Similarity=0.672 Sum_probs=26.4
Q ss_pred ceeEeeeccCCCeeeecCCcCcccchhhhhhc
Q 002201 735 VKICVICKQIHGSCTQCCKCSTYYHAMCASRA 766 (954)
Q Consensus 735 ~~~C~iC~~~~Ga~IqC~~C~~aFHv~CA~~a 766 (954)
...|.+|+.....-+.|..|...||..|....
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~ 211 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKY 211 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHH
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHH
Confidence 35799999865566899999999999999553
No 269
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=32.23 E-value=31 Score=27.92 Aligned_cols=40 Identities=28% Similarity=0.776 Sum_probs=24.7
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccccc-ccccCCCcccCCccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSH-FKDLGGSEYYCPACKAK 508 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~-~e~~~~~~Y~Cp~Cr~k 508 (954)
.|.+|+-+|+...+.. . .++..+. ++++ ..+|.||.|...
T Consensus 5 ~C~~CGyvYd~~~Gdp-------------~-~gi~pGt~f~~l-P~dw~CP~Cg~~ 45 (52)
T 1e8j_A 5 VCTVCGYEYDPAKGDP-------------D-SGIKPGTKFEDL-PDDWACPVCGAS 45 (52)
T ss_dssp ECSSSCCCCCTTTCCT-------------T-TTCCSSCCTTSS-CTTCCCSSSCCC
T ss_pred EeCCCCeEEcCCcCCc-------------c-cCcCCCCchHHC-CCCCcCCCCCCc
Confidence 4889999988665410 0 1233322 4555 458999999864
No 270
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=32.20 E-value=13 Score=44.64 Aligned_cols=92 Identities=21% Similarity=0.346 Sum_probs=0.0
Q ss_pred cccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEeccccCcCCCCcccCCCceeeccccCcCCceEeCCC
Q 002201 638 RCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYTEGGALKPTDVDSLWVHVTCAWFQPEVSFASD 717 (954)
Q Consensus 638 ~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~~gGaLK~t~~~g~WvHv~CAlw~Pev~f~~~ 717 (954)
.|++|...--.-..+=+.|..|+..||..|.-.....= .+...........-.| .|.-.
T Consensus 50 ~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c-----------~~~~~~~~~~~~~~~h----------~~~~~ 108 (674)
T 3pfq_A 50 FCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSC-----------PGADKGPASDDPRSKH----------KFKIH 108 (674)
T ss_dssp ---------------------------------------------------------------CC----------CCCEE
T ss_pred ccccccccccccCCceeECCCCCCCcChhhcCcCcccC-----------CCcccccccccccCCc----------ceeec
Q ss_pred CCcccccccCCCCCCCCceeEeeeccCCC----eeeecCCcCcccchhhh
Q 002201 718 EKMEPALGILCIPSNSFVKICVICKQIHG----SCTQCCKCSTYYHAMCA 763 (954)
Q Consensus 718 ~~~~pv~gi~~i~~~~~~~~C~iC~~~~G----a~IqC~~C~~aFHv~CA 763 (954)
....|.. |.+|+..-. .-.+|.-|...+|..|+
T Consensus 109 ~~~~~~~-------------C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~ 145 (674)
T 3pfq_A 109 TYSSPTF-------------CDHCGSLLYGLIHQGMKCDTCMMNVHKRCV 145 (674)
T ss_dssp CCSSCCC-------------CSSSCSCCBBSSSCEECCSSSCCCBCSSTT
T ss_pred CCCCCCC-------------CCccccccchhhcCccccccCCcchhhhhh
No 271
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=31.98 E-value=21 Score=30.15 Aligned_cols=54 Identities=19% Similarity=0.464 Sum_probs=33.8
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
....|+||...+.+. +. ..|.+.||..|....-... ........||.|+.....
T Consensus 18 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~~~~-~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLKEP-----VS-ADCNHSFCRACITLNYESN-RNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCSSC-----EE-CTTSCCBCHHHHHHHHHHS-BCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhCcc-----ee-CCCCCHHHHHHHHHHHHhc-cCCCCCCCCCCCCCcCCH
Confidence 345699998776532 23 2599999999974322110 012346899999977643
No 272
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=31.62 E-value=18 Score=35.29 Aligned_cols=50 Identities=24% Similarity=0.688 Sum_probs=38.0
Q ss_pred cccccccccHHhhhcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCccc
Q 002201 437 GDQLFCRTCAKLMKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACK 506 (954)
Q Consensus 437 ~~~~lC~~C~~l~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr 506 (954)
....+|..|...+.-++.||-|+..+. -.-|+.|+.| | . .+..|+|+.|-
T Consensus 56 ~~~vlCg~C~~~q~~~~~C~~Cg~~f~------~Y~C~~C~l~-----d--~-------~k~~yHC~~Cg 105 (143)
T 2dkt_A 56 VKEVQCINCEKLQHAQQTCEDCSTLFG------EYYCSICHLF-----D--K-------DKRQYHCESCG 105 (143)
T ss_dssp CCCEEESSSCCEECSCSBCSSSCCBSC------SEECSSSCCE-----E--C-------SSSEEEETTTT
T ss_pred cceeeecccCccccccCcCCCCCccce------eeEeceeecc-----c--C-------CCceecCCCCC
Confidence 457899999998888899999987664 3479999999 2 0 23458888875
No 273
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=31.51 E-value=28 Score=40.44 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=28.1
Q ss_pred CceEEEecCccCceeeeccccCCCCeEEEecc
Q 002201 898 DRVCFGRSGIHGWGLFARRNIQEGEMVLEYRG 929 (954)
Q Consensus 898 ~~~~v~~S~ihG~Glfa~~~i~~g~~ViEY~G 929 (954)
..|.+......|+||+|+++|++|+.|+.-=-
T Consensus 93 ~~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~ 124 (497)
T 3smt_A 93 EGFEMVNFKEEGFGLRATRDIKAEELFLWVPR 124 (497)
T ss_dssp TTEEEEEETTTEEEEEESSCBCTTCEEEEEEG
T ss_pred cceEEEEcCCCccEEEEcccCCCCCEEEEcCH
Confidence 46889888899999999999999999987633
No 274
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=31.49 E-value=17 Score=32.54 Aligned_cols=33 Identities=18% Similarity=0.423 Sum_probs=27.3
Q ss_pred CcccccCCCccCCCCceEEcCCCCccccCccccCcc
Q 002201 637 ERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARN 672 (954)
Q Consensus 637 ~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~ 672 (954)
-.|.+|+... .+-...|..|+..+|..|.-.+.
T Consensus 48 ~~C~~C~~~~---~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 48 YTCDKCEEEG---TIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp CCCTTTSCCC---CSCEEECTTTCCCCCHHHHHCSS
T ss_pred eEeCCCCCcC---CCcEEEcCCCCCeEcHHhcCCCC
Confidence 4799999863 36789999999999999986553
No 275
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.31 E-value=38 Score=26.89 Aligned_cols=44 Identities=20% Similarity=0.387 Sum_probs=30.5
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...|... .. ..|.+-|+..|... ....||.||.....
T Consensus 6 ~~~C~IC~~~~~~p---~~---l~CgH~fC~~Ci~~----------~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 6 FLRCQQCQAEAKCP---KL---LPCLHTLCSGCLEA----------SGMQCPICQAPWPL 49 (56)
T ss_dssp CSSCSSSCSSCBCC---SC---STTSCCSBTTTCSS----------SSSSCSSCCSSSSC
T ss_pred CCCceEeCCccCCe---EE---cCCCCcccHHHHcc----------CCCCCCcCCcEeec
Confidence 34599998877632 12 34888889998533 35789999977643
No 276
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=30.65 E-value=14 Score=32.21 Aligned_cols=48 Identities=25% Similarity=0.482 Sum_probs=31.6
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
...||||...+.+. +.-..|.+-|+..|....-. ....+.||.|+...
T Consensus 13 ~~~C~IC~~~~~~p-----~~~~~CgH~fC~~Ci~~~~~-----~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 13 ELLCLICKDIMTDA-----VVIPCCGNSYCDECIRTALL-----ESDEHTCPTCHQND 60 (92)
T ss_dssp TTEETTTTEECSSC-----EECTTTCCEECHHHHHHHHH-----HCTTCCCTTTCCSS
T ss_pred CCCCCCCChhhcCc-----eECCCCCCHHHHHHHHHHHH-----hcCCCcCcCCCCcC
Confidence 34699998877632 33334999999999632211 12348999999765
No 277
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=30.26 E-value=15 Score=35.59 Aligned_cols=48 Identities=23% Similarity=0.476 Sum_probs=32.6
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...+.+ -+. ..|.+.|+..|....- ....+.||.||.....
T Consensus 78 ~~~C~IC~~~~~~-----pv~-~~CgH~fC~~Ci~~~~------~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 78 SFMCVCCQELVYQ-----PVT-TECFHNVCKDCLQRSF------KAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HTBCTTTSSBCSS-----EEE-CTTSCEEEHHHHHHHH------HTTCCBCTTTCCBCCT
T ss_pred CCEeecCChhhcC-----CEE-cCCCCchhHHHHHHHH------HhCCCcCCCCCccCCC
Confidence 3469999877653 233 4899999999963222 1245799999977644
No 278
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=30.20 E-value=14 Score=33.90 Aligned_cols=39 Identities=23% Similarity=0.397 Sum_probs=25.5
Q ss_pred ccccCCCCccCCCCCCCCCCCCccccccccccccccccccHHhh
Q 002201 406 SWAKNKDKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLM 449 (954)
Q Consensus 406 ~~~kck~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~ 449 (954)
.|+ +.|-+|..|+..+...+.. .-..++..+|..|+...
T Consensus 25 ~wH--~~CF~C~~C~~~L~~~g~~---~~~~~g~~yC~~~y~~~ 63 (114)
T 1j2o_A 25 YWH--EDCLSCDLCGCRLGEVGRR---LYYKLGRKLCRRDYLRL 63 (114)
T ss_dssp EEC--TTTCCCSSSCSCCCCSSSC---CCCBTTBCCCHHHHHHH
T ss_pred hHH--HhcCcccccCCchhcCCCe---eEEECCeeechHHHHHH
Confidence 565 6888899998887631111 13345778899997544
No 279
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=29.80 E-value=12 Score=42.27 Aligned_cols=66 Identities=20% Similarity=0.490 Sum_probs=48.9
Q ss_pred CCCcccccCCCccCCCCceEEcC--CCCccccCccccCccc-------cCCCceeEecccc--CcCCCCcccCCCceeec
Q 002201 635 TTERCAVCRWVEDWDYNKIIICN--RCQIAVHQECYGARNV-------QDFTSWVFEIVYT--EGGALKPTDVDSLWVHV 703 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~--~C~~avH~~CyGv~~~-------p~~~~W~C~~C~~--~gGaLK~t~~~g~WvHv 703 (954)
.+..|.+|.++ +.|+.|+ .|...|-..|.....- .....|.|=.|.. ..+.|++-. .|..-
T Consensus 92 ~~~yCr~C~~G-----g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p~~~ll~~r~---~w~~~ 163 (386)
T 2pv0_B 92 YQSYCSICCSG-----ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRR---KWRSQ 163 (386)
T ss_dssp SBCSCTTTCCC-----SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCCEETTEEBCS---SHHHH
T ss_pred CcccceEcCCC-----CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcchHhhhhhhh---hHHHH
Confidence 35689999987 6899999 9999999999855432 2237899999987 356666543 57666
Q ss_pred cccCc
Q 002201 704 TCAWF 708 (954)
Q Consensus 704 ~CAlw 708 (954)
+..++
T Consensus 164 ~~~f~ 168 (386)
T 2pv0_B 164 LKAFY 168 (386)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 280
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=29.67 E-value=34 Score=26.51 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=30.6
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEeccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVY 685 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~ 685 (954)
.+..|.||.+.-..+ +..+.-..|+-.||..|...-.. ....|..|+
T Consensus 4 ~~~~C~IC~~~~~~~-~~~~~~~~C~H~f~~~Ci~~w~~---~~~~CP~Cr 50 (55)
T 1iym_A 4 DGVECAVCLAELEDG-EEARFLPRCGHGFHAECVDMWLG---SHSTCPLCR 50 (55)
T ss_dssp CSCCCTTTCCCCCTT-SCCEECSSSCCEECTTHHHHTTT---TCCSCSSSC
T ss_pred CCCcCccCCccccCC-CceEECCCCCCcccHHHHHHHHH---cCCcCcCCC
Confidence 456899998864433 34555557999999999843221 234677775
No 281
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=29.64 E-value=26 Score=28.01 Aligned_cols=29 Identities=24% Similarity=0.697 Sum_probs=24.0
Q ss_pred CcccccCCCccCCCCceEEcCCCCccccCcccc
Q 002201 637 ERCAVCRWVEDWDYNKIIICNRCQIAVHQECYG 669 (954)
Q Consensus 637 ~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyG 669 (954)
..|.+|+..- +. + +.|..|...+|+.|..
T Consensus 15 t~C~~C~k~i-~~-G--~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSM-IF-G--VKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSS-CC-E--EEETTTTEEESSSCTT
T ss_pred cCccccCcee-EC-c--CCCCCCCCccchhhcC
Confidence 6899998763 42 2 7899999999999976
No 282
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=29.61 E-value=27 Score=27.17 Aligned_cols=35 Identities=26% Similarity=0.603 Sum_probs=24.3
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
+-.+|-+|++..- --....++|..|..-+|..|..
T Consensus 10 ~pt~C~~C~~~l~-g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 10 SPTFCDHCGSLLW-GLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp SCCBCTTTCCBCC-SSSSCEEEETTTCCEECHHHHT
T ss_pred CCCCcCCCCceee-ccCCccCEeCCCCCeECHHHhh
Confidence 3455666665431 1235689999999999999964
No 283
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.58 E-value=9.2 Score=32.90 Aligned_cols=35 Identities=20% Similarity=0.450 Sum_probs=27.0
Q ss_pred CCcccccCCCccCC-CCceEEcCCCCccccCccccCc
Q 002201 636 TERCAVCRWVEDWD-YNKIIICNRCQIAVHQECYGAR 671 (954)
Q Consensus 636 ~~~C~VC~~~e~~~-~~~Li~C~~C~~avH~~CyGv~ 671 (954)
...|.+|... .|. ..+-+.|..|.+.+|..|....
T Consensus 28 pt~C~~C~~~-lwGl~kqG~~C~~C~~~~Hk~C~~~v 63 (74)
T 2db6_A 28 PKFCDVCARM-IVLNNKFGLRCKNCKTNIHEHCQSYV 63 (74)
T ss_dssp CEECSSSCCE-ECHHHHEEEEESSSCCEECTTTTGGG
T ss_pred CcCchhcChh-hccccCCccccCCCCCccChhHHhhC
Confidence 4679999875 342 2367899999999999998643
No 284
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.57 E-value=18 Score=30.46 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=19.4
Q ss_pred ccCCCCCCCCCC----CCccccccccccccccccccHHhh
Q 002201 414 RPCDGCGMTLPS----KSAKKIKASTTGDQLFCRTCAKLM 449 (954)
Q Consensus 414 ~~C~~CG~~~~~----~~~~k~~~~w~~~~~lC~~C~~l~ 449 (954)
..|..|+..+.+ ....-....||.+.+.|..|.+..
T Consensus 6 ~~C~~C~~~I~~~g~~~~~~a~~~~wH~~CF~C~~C~~~L 45 (76)
T 1x68_A 6 SGCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSL 45 (76)
T ss_dssp CCCTTTCCCCCTTTTCCEEEETTEEEEGGGCBCTTTCCBC
T ss_pred CCCccCCCcccCCCCceeEEECCcccCcccCChhhCCCcC
Confidence 356666666553 222223345666666666665444
No 285
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=29.05 E-value=6.2 Score=32.67 Aligned_cols=49 Identities=14% Similarity=0.195 Sum_probs=30.1
Q ss_pred CCCcccccCCCccCCCCceEEc--CCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIIC--NRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C--~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
....|.||...+.. ..+.-| .+.-..||+.|+-.=.... +.+.|..|.+
T Consensus 5 ~~~~CrIC~~~~~~--~l~~PC~C~gs~~~~H~~Cl~~W~~~~-~~~~C~~C~~ 55 (60)
T 1vyx_A 5 DVPVCWICNEELGN--ERFRACGCTGELENVHRSCLSTWLTIS-RNTACQICGV 55 (60)
T ss_dssp SCCEETTTTEECSC--CCCCSCCCSSGGGSCCHHHHHHHHHHH-TCSBCTTTCC
T ss_pred CCCEeEEeecCCCC--ceecCcCCCCchhhhHHHHHHHHHHhC-CCCccCCCCC
Confidence 45789999875322 223443 3444599999985432222 4578888864
No 286
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.03 E-value=21 Score=30.74 Aligned_cols=49 Identities=16% Similarity=0.310 Sum_probs=29.4
Q ss_pred CCCcccccCCCccC----------CCCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDW----------DYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~----------~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
.++.|+||.+.-.. ..+.++.-..|+-.||..|...=... .-.|..|+.
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~---~~~CP~CR~ 72 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQ---NNRCPLCQQ 72 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTT---CCBCTTTCC
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHh---CCCCCCcCC
Confidence 46779999876533 22334444479999999997432211 126777753
No 287
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.95 E-value=21 Score=29.47 Aligned_cols=33 Identities=21% Similarity=0.494 Sum_probs=14.0
Q ss_pred cCCCCCCCCCCCCccccccccccccccccccHH
Q 002201 415 PCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAK 447 (954)
Q Consensus 415 ~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~ 447 (954)
.|..|+..+.+....-....||.+.+.|..|.+
T Consensus 7 ~C~~C~~~I~~~~~~a~~~~~H~~CF~C~~C~~ 39 (70)
T 2d8x_A 7 GCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQE 39 (70)
T ss_dssp BCSSSCCBCCSCCEEETTEEECTTTSBCSSSCC
T ss_pred cCccCCCEecceEEEECcccccccCCEeCCCCC
Confidence 345555444332222223345555555555543
No 288
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.58 E-value=23 Score=29.63 Aligned_cols=47 Identities=15% Similarity=0.261 Sum_probs=30.1
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
....|.||.+.-.. +..+..-.|+-.||..|...-... ...|..|+.
T Consensus 22 ~~~~C~IC~~~~~~--~~~~~~l~C~H~fh~~Ci~~w~~~---~~~CP~Cr~ 68 (75)
T 1x4j_A 22 EQTLCVVCMCDFES--RQLLRVLPCNHEFHAKCVDKWLKA---NRTCPICRA 68 (75)
T ss_dssp SCCEETTTTEECCB--TCEEEEETTTEEEETTHHHHHHHH---CSSCTTTCC
T ss_pred CCCCCeECCcccCC--CCeEEEECCCCHhHHHHHHHHHHc---CCcCcCcCC
Confidence 56789999975332 233444469999999998543211 236888864
No 289
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=28.39 E-value=41 Score=32.32 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=41.0
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCcee
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIF 325 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~ 325 (954)
..|.+|+.|+++.+ .--|.+|.|++-. ... ......|.|.|-||... -=-||+..+|-
T Consensus 11 ~~~~vGe~v~~~~~-d~~~y~AkIl~i~-~~~-----~~~~~~YyVHY~gwNkR----~DEWV~~~ri~ 68 (133)
T 1wgs_A 11 VTVEIGETYLCRRP-DSTWHSAEVIQSR-VND-----QEGREEFYVHYVGFNRR----LDEWVDKNRLA 68 (133)
T ss_dssp CCCCTTSEEEEEET-TTEEEEEEEEEEE-EET-----TTTEEEEEEECTTTCSS----CCEEECTTTSC
T ss_pred cccCCCCEEEEEeC-CCCEEEEEEEEEE-ecc-----CCCceEEEEeccCcCCC----ceeecChhhcc
Confidence 35999999999986 3469999998643 100 01123699999995443 33999999983
No 290
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=27.94 E-value=14 Score=33.92 Aligned_cols=49 Identities=20% Similarity=0.211 Sum_probs=29.1
Q ss_pred CCCcccccCCCccCC-------------CCceEEcCCCCccccCccccCccccCCCceeEecccc
Q 002201 635 TTERCAVCRWVEDWD-------------YNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVYT 686 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~-------------~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~~ 686 (954)
.++.|+||...-... ++..+.-..|+-.||..|...-.. ..-.|..|+.
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~---~~~~CP~Cr~ 97 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK---TRQVCPLDNR 97 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT---TCSBCSSSCS
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH---cCCcCcCCCC
Confidence 467899998753321 122333347999999999733211 1235777764
No 291
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=27.80 E-value=35 Score=26.39 Aligned_cols=47 Identities=13% Similarity=0.273 Sum_probs=30.1
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccCccccCCCceeEeccc
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVQDFTSWVFEIVY 685 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~~~p~~~~W~C~~C~ 685 (954)
....|.||.+.-... +..+.--.|+-.||..|+..-... ...|..|+
T Consensus 4 ~~~~C~IC~~~~~~~-~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr 50 (55)
T 2ecm_A 4 GSSGCPICLEDIHTS-RVVAHVLPCGHLLHRTCYEEMLKE---GYRCPLCS 50 (55)
T ss_dssp CCCSCTTTCCCCCTT-TSCEEECTTSCEEETTHHHHHHHH---TCCCTTSC
T ss_pred CCCcCcccChhhcCC-CcCeEecCCCCcccHHHHHHHHHc---CCcCCCCC
Confidence 467899999864322 334555679999999998433211 14577775
No 292
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=27.78 E-value=22 Score=32.52 Aligned_cols=55 Identities=22% Similarity=0.619 Sum_probs=32.5
Q ss_pred CccccccccccCCCCCCeeeCCCCCcee--eccccccccc--cccccCCCcccCCcccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWV--HAECDKISSS--HFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~Wv--H~~Cd~~~~~--~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
..||.|+....... ....|+.|+.-+ ++-|-.=... .++.-...+|+|..|..-.
T Consensus 33 ~~CP~Cq~eL~~~g--~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC~~chgLi 91 (101)
T 2jne_A 33 LHCPQCQHVLDQDN--GHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGLI 91 (101)
T ss_dssp CBCSSSCSBEEEET--TEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEETTTTEEE
T ss_pred ccCccCCCcceecC--CEEECccccchhhccccCcchhhHHHHHHHhcCcchhhccCCcee
Confidence 68999987765443 366799998533 3334221111 1232346789999997543
No 293
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=27.72 E-value=29 Score=28.90 Aligned_cols=35 Identities=23% Similarity=0.461 Sum_probs=26.5
Q ss_pred CCcccccCCCccCCCCceEEcCCCCccccCccccCc
Q 002201 636 TERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGAR 671 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv~ 671 (954)
...|++|+..-. =..+-+.|..|++.+|..|-...
T Consensus 19 ~~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~~~ 53 (61)
T 4b6d_A 19 PESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRDRC 53 (61)
T ss_dssp CEECTTTCCEEC-TTCEEEEESSSSCEECGGGGGGS
T ss_pred CcccccccCEEE-EeeEeeECCCCCCeEchhHhhcC
Confidence 468999966432 22478999999999999997543
No 294
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.58 E-value=55 Score=28.79 Aligned_cols=16 Identities=19% Similarity=0.293 Sum_probs=11.9
Q ss_pred CCcccCCccccccccc
Q 002201 497 GSEYYCPACKAKFNFE 512 (954)
Q Consensus 497 ~~~Y~Cp~Cr~k~~~~ 512 (954)
...|.|+.|...+...
T Consensus 78 ~~~~~C~~C~k~f~~~ 93 (115)
T 2dmi_A 78 QKVLKCMYCGHSFESL 93 (115)
T ss_dssp CSSCBCSSSCCBCSSH
T ss_pred CcceECCCCCCccCCH
Confidence 3569999998777543
No 295
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=27.42 E-value=16 Score=30.06 Aligned_cols=33 Identities=21% Similarity=0.616 Sum_probs=26.5
Q ss_pred CCCcccccCCCccCCCCceEEcCCCCccccCccccC
Q 002201 635 TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGA 670 (954)
Q Consensus 635 ~~~~C~VC~~~e~~~~~~Li~C~~C~~avH~~CyGv 670 (954)
...+|+.|++.- ..+-+.|..|+..+|..|...
T Consensus 21 ~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 21 GPGWCDLCGREV---LRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp CCEECTTTCSEE---CSCCEECTTTSCEECHHHHTT
T ss_pred CCeEchhcchhh---hhCccEeCCCCCeEehhhhhh
Confidence 346799998764 356789999999999999743
No 296
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=27.14 E-value=26 Score=27.33 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=21.3
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccHHhhhc
Q 002201 414 RPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKS 451 (954)
Q Consensus 414 ~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~k 451 (954)
..|..||++..- .|.+ .. ....||+.|+..+++
T Consensus 2 ~~C~~C~tt~Tp-~WR~---gp-~G~~LCNaCGl~~k~ 34 (43)
T 2vut_I 2 TTCTNCFTQTTP-LWRR---NP-EGQPLCNACGLFLKL 34 (43)
T ss_dssp CCCSSSCCCCCS-CCEE---CT-TSCEECHHHHHHHHH
T ss_pred CcCCccCCCCCC-cccc---CC-CCCcccHHHHHHHHH
Confidence 468999987532 2332 11 234999999987764
No 297
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=27.13 E-value=28 Score=29.40 Aligned_cols=37 Identities=16% Similarity=0.438 Sum_probs=23.7
Q ss_pred CCccCCCCCCCCCCCCccccccccccccccccccHHhhhcCC
Q 002201 412 DKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKSKH 453 (954)
Q Consensus 412 ~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~kg~ 453 (954)
.-..|..||++..- .|.+ .. ...+||+.|+..+.+..
T Consensus 6 ~~~~C~~C~tt~Tp-~WR~---gp-~G~~LCNACGl~~~~~~ 42 (63)
T 3dfx_A 6 AGTSCANCQTTTTT-LWRR---NA-NGDPVCNACGLYYKLHN 42 (63)
T ss_dssp TTCCCTTTCCSCCS-SCCC---CT-TSCCCCHHHHHHHHHHS
T ss_pred CCCcCCCcCCCCCC-ccCC---CC-CCCchhhHHHHHHHHcC
Confidence 34579999987532 2322 22 23499999998887543
No 298
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=27.07 E-value=29 Score=27.24 Aligned_cols=30 Identities=33% Similarity=0.774 Sum_probs=21.6
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
-.+|-+|++..- ..++|..|..-+|..|..
T Consensus 14 pt~C~~C~~~l~-----qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 14 LAFCDICQKFLL-----NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp CEECTTSSSEEC-----SEEECTTTTCCBCSTTSS
T ss_pred CcCCCCcccccc-----cCCEeCCCCCeEChhHHh
Confidence 345555555432 478999999999999964
No 299
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.85 E-value=51 Score=28.93 Aligned_cols=36 Identities=28% Similarity=0.557 Sum_probs=25.3
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
..-.+|-+|.+..- --....++|..|..-+|..|..
T Consensus 26 ~~pt~C~~C~~~l~-Gl~kqG~~C~~C~~~~Hk~C~~ 61 (85)
T 2eli_A 26 GSPTFCDHCGSLLY-GLIHQGMKCDTCDMNVHKQCVI 61 (85)
T ss_dssp SSCCBCSSSCCBCC-CSSSCEEECSSSCCEEETTTTT
T ss_pred CCCcCCcccCcccc-ccccCCCcCCCcCCccCHhHHh
Confidence 44566777765431 1235689999999999999963
No 300
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=26.77 E-value=32 Score=29.13 Aligned_cols=15 Identities=13% Similarity=0.328 Sum_probs=10.9
Q ss_pred CCcccCCcccccccc
Q 002201 497 GSEYYCPACKAKFNF 511 (954)
Q Consensus 497 ~~~Y~Cp~Cr~k~~~ 511 (954)
...|.|+.|...+..
T Consensus 62 ~~~~~C~~C~~~f~~ 76 (96)
T 2dmd_A 62 ERPFKCQICPYASRN 76 (96)
T ss_dssp CCCEECSSSSCEESS
T ss_pred CCCccCCCCCCccCC
Confidence 456999999876644
No 301
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.75 E-value=24 Score=27.58 Aligned_cols=45 Identities=20% Similarity=0.411 Sum_probs=29.1
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPAC 505 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~C 505 (954)
....|+||...+... +. ..|.+.||..|....-. . ......||.|
T Consensus 14 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~~---~-~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEP-----VI-IECGHNFCKACITRWWE---D-LERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSC-----CC-CSSCCCCCHHHHHHHTT---S-SCCSCCCSCC
T ss_pred cCCCCccCCcccCcc-----Ee-CCCCCccCHHHHHHHHH---h-cCCCCCCCCC
Confidence 445699998877542 11 36999999999643221 1 1246789987
No 302
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=26.62 E-value=37 Score=27.78 Aligned_cols=40 Identities=23% Similarity=0.682 Sum_probs=24.8
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccccc-ccccCCCcccCCccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSH-FKDLGGSEYYCPACKAK 508 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~-~e~~~~~~Y~Cp~Cr~k 508 (954)
.|.+|+-+|+...+.. + .++.... ++++ ..+|.||.|...
T Consensus 5 ~C~~CGyvYd~~~Gdp-------------~-~gi~pGt~f~~l-P~dw~CP~Cga~ 45 (55)
T 2v3b_B 5 QCVVCGFIYDEALGLP-------------E-EGIPAGTRWEDI-PADWVCPDCGVG 45 (55)
T ss_dssp EETTTCCEEETTTCBT-------------T-TTBCTTCCGGGS-CTTCCCTTTCCC
T ss_pred EeCCCCeEECCCcCCc-------------c-cCcCCCCChhHC-CCCCcCCCCCCC
Confidence 4888998888765410 0 1233322 5555 358999999864
No 303
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.43 E-value=18 Score=29.12 Aligned_cols=46 Identities=20% Similarity=0.452 Sum_probs=29.7
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPAC 505 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~C 505 (954)
.....||||...+.+ -+.- .|.+.||..|...--. . ......||.|
T Consensus 18 ~~~~~C~IC~~~~~~-----p~~~-~CgH~fC~~Ci~~~~~---~-~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQK-----PVTI-DCGHNFCLKCITQIGE---T-SCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSS-----CEEC-TTSSEECHHHHHHHHH---H-CSSCCCCSCC
T ss_pred ccCCCCCcCCchhCC-----eEEe-CCCCcchHHHHHHHHH---c-CCCCCcCcCC
Confidence 345579999877653 2332 8999999999632221 1 2246789987
No 304
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=26.35 E-value=32 Score=29.71 Aligned_cols=36 Identities=14% Similarity=0.394 Sum_probs=22.3
Q ss_pred CCccCCCCCCCCCCCCccccccccccccccccccHHhhhc
Q 002201 412 DKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKS 451 (954)
Q Consensus 412 ~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~k 451 (954)
.-.+|..||++..- .|.+ -+..+-+||+.|+..+.+
T Consensus 7 ~~~~C~nC~tt~Tp-~WRr---g~~~~g~LCNACGl~~~~ 42 (71)
T 2kae_A 7 KSFQCSNCSVTETI-RWRN---IRSKEGIQCNACFIYQRK 42 (71)
T ss_dssp -CCCCSSSCCSCCS-SCCC---CSSSSCCCSSHHHHHHHH
T ss_pred CCCcCCccCCCCCC-cccc---CCCCCCccchHHHHHHHH
Confidence 34679999988532 2222 112234899999877764
No 305
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=26.19 E-value=45 Score=38.02 Aligned_cols=33 Identities=27% Similarity=0.592 Sum_probs=26.2
Q ss_pred CCceEEEec-CccCceeeeccccCCCCeEEEecc
Q 002201 897 HDRVCFGRS-GIHGWGLFARRNIQEGEMVLEYRG 929 (954)
Q Consensus 897 ~~~~~v~~S-~ihG~Glfa~~~i~~g~~ViEY~G 929 (954)
.+.|.+... ...|+||+|+++|++|+.|+.-=-
T Consensus 37 ~~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~ 70 (449)
T 3qxy_A 37 SPKVAVSRQGTVAGYGMVARESVQAGELLFVVPR 70 (449)
T ss_dssp CTTEEEESSSCSSSSEEEESSCBCTTCEEEEEEG
T ss_pred CCceEEEecCCCceEEEEECCCCCCCCEEEEeCc
Confidence 346777763 478999999999999999987543
No 306
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=26.13 E-value=46 Score=27.58 Aligned_cols=36 Identities=31% Similarity=0.660 Sum_probs=25.2
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
.+-.+|-+|.+..- --....++|..|..-+|..|..
T Consensus 21 ~~pt~C~~C~~~l~-Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 21 KSPTFCEHCGTLLW-GLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp CSCCBCSSSCCBCC-CSSSCSEEESSSCCEECTTTTT
T ss_pred CCCcCchhcChhhe-ecCCcccccCCCCCccCHhHHh
Confidence 34566777766431 1234678999999999999964
No 307
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=26.08 E-value=40 Score=27.28 Aligned_cols=40 Identities=33% Similarity=0.850 Sum_probs=24.2
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccccc-ccccCCCcccCCccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSH-FKDLGGSEYYCPACKAK 508 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~-~e~~~~~~Y~Cp~Cr~k 508 (954)
.|.+|+-+|+...+.. . .+|.... ++.+ ..+|.||.|...
T Consensus 4 ~C~~CGyvYd~~~Gdp-------------~-~gi~pGt~f~~l-P~dw~CP~Cg~~ 44 (52)
T 1yk4_A 4 SCKICGYIYDEDEGDP-------------D-NGISPGTKFEDL-PDDWVCPLCGAP 44 (52)
T ss_dssp EESSSSCEEETTTCBG-------------G-GTBCTTCCGGGS-CTTCBCTTTCCB
T ss_pred EeCCCCeEECCCcCCc-------------c-cCcCCCCCHhHC-CCCCcCCCCCCC
Confidence 4888888887764410 0 1232222 4454 458999999864
No 308
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=26.08 E-value=35 Score=30.23 Aligned_cols=41 Identities=27% Similarity=0.575 Sum_probs=24.8
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccccc-ccccCCCcccCCcccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSH-FKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~-~e~~~~~~Y~Cp~Cr~k~ 509 (954)
.|.+|+-+|+...+.. . .+|.... ++++ ..+|.||.|....
T Consensus 29 ~C~vCGyvYD~~~Gdp-------------~-~gI~pGT~fedl-PddW~CPvCga~K 70 (81)
T 2kn9_A 29 RCIQCGFEYDEALGWP-------------E-DGIAAGTRWDDI-PDDWSCPDCGAAK 70 (81)
T ss_dssp EETTTCCEEETTTCBT-------------T-TTBCTTCCTTTS-CTTCCCTTTCCCG
T ss_pred EeCCCCEEEcCCcCCc-------------c-cCcCCCCChhHC-CCCCcCCCCCCCH
Confidence 4888888888765410 0 1233322 4554 3589999998643
No 309
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=26.05 E-value=40 Score=29.86 Aligned_cols=54 Identities=17% Similarity=0.503 Sum_probs=31.9
Q ss_pred CccccccccccCCCCCCeeeCCCCCcee-----eccccccccccccccCCCcccCCcccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWV-----HAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~Wv-----H~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
..||.|+.....+. ...+|+.|++-| =.+|...-.. ++.-...+|+|+.|..-.
T Consensus 3 ~~CP~C~~~l~~~~--~~~~C~~C~~~~~~~afCPeCgq~Le~-lkACGA~~yFC~~C~~Li 61 (81)
T 2jrp_A 3 ITCPVCHHALERNG--DTAHCETCAKDFSLQALCPDCRQPLQV-LKACGAVDYFCQNGHGLI 61 (81)
T ss_dssp CCCSSSCSCCEECS--SEEECTTTCCEEEEEEECSSSCSCCCE-EEETTEEEECCTTTTCCC
T ss_pred CCCCCCCCccccCC--CceECccccccCCCcccCcchhhHHHH-HHhcCCcCeeeccCCCEe
Confidence 57899987765443 377899998543 2233322221 222235689999997543
No 310
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=25.92 E-value=14 Score=33.98 Aligned_cols=53 Identities=23% Similarity=0.500 Sum_probs=34.9
Q ss_pred CCccccccccccCC-CCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 452 KHFCGICKKVWNHS-DGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 452 g~yCpiC~k~y~~~-d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
...|+||...|.+. .....+.-..|.+-||.+|...-- .....||.|+.....
T Consensus 7 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~-------~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL-------KNANTCPTCRKKINH 60 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHH-------TTCSBCTTTCCBCTT
T ss_pred CCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHH-------HhCCCCCCCCCcCcc
Confidence 45699999887643 112344455899999999963221 223599999976643
No 311
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.92 E-value=44 Score=29.17 Aligned_cols=37 Identities=22% Similarity=0.555 Sum_probs=26.1
Q ss_pred hhcCCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 449 MKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 449 ~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
+..-.+|-+|.+..- --....++|..|..-+|..|..
T Consensus 25 ~~~pt~C~~C~~~lw-Gl~kqg~~C~~C~~~~Hk~C~~ 61 (83)
T 2yuu_A 25 FGQPTFCSVCKDFVW-GLNKQGYKCRQCNAAIHKKCID 61 (83)
T ss_dssp CSSCCCCSSSCCCCC-SSSCCEEEETTTCCEECTTGGG
T ss_pred CCCCcChhhcChhhc-cccccccccCCcCCeeChhhhh
Confidence 345566777766432 1235689999999999999963
No 312
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.78 E-value=53 Score=28.53 Aligned_cols=39 Identities=15% Similarity=0.337 Sum_probs=25.4
Q ss_pred CCccCCCCCCCCCCCCccccccccccccccccccHHhhh
Q 002201 412 DKRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMK 450 (954)
Q Consensus 412 ~c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~ 450 (954)
.-.+|..|+..+.+....-....||.+.+.|..|.+...
T Consensus 24 ~~~~C~~C~~~I~~~~v~a~~~~~H~~CF~C~~C~~~L~ 62 (90)
T 2dar_A 24 RTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMA 62 (90)
T ss_dssp CCCBBSSSCCBCCSCEEEETTEEECTTTCBCSSSCCBCS
T ss_pred CCCCCccCCCEecceEEEECCccccccCCccCCCCCCCC
Confidence 345688888777654333344568888888888865544
No 313
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=25.74 E-value=33 Score=29.69 Aligned_cols=15 Identities=20% Similarity=0.547 Sum_probs=11.1
Q ss_pred CCcccCCcccccccc
Q 002201 497 GSEYYCPACKAKFNF 511 (954)
Q Consensus 497 ~~~Y~Cp~Cr~k~~~ 511 (954)
...|.|+.|...+..
T Consensus 71 ~~~~~C~~C~~~f~~ 85 (106)
T 2ee8_A 71 EKPFKCQECGKGFCQ 85 (106)
T ss_dssp CCTTSCSSSCCCCSS
T ss_pred CCCeECCCcCCcccC
Confidence 456999999876644
No 314
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=25.36 E-value=32 Score=30.38 Aligned_cols=65 Identities=20% Similarity=0.390 Sum_probs=40.2
Q ss_pred ccCCCCCCCCC--CCCccccccccccccccccccHHhhhcCCcc-----ccccccccCCCCCCeeeCCCCCceee
Q 002201 414 RPCDGCGMTLP--SKSAKKIKASTTGDQLFCRTCAKLMKSKHFC-----GICKKVWNHSDGGSWVRCDGCKVWVH 481 (954)
Q Consensus 414 ~~C~~CG~~~~--~~~~~k~~~~w~~~~~lC~~C~~l~~kg~yC-----piC~k~y~~~d~~~~VqCd~C~~WvH 481 (954)
..|..|+..+. +....-....||.+-+.|..|.+......|- ++|...|...- --.|..|.+-|-
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~~---~~~C~~C~~~I~ 77 (101)
T 2cup_A 6 SGCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTRED---SPKCKGCFKAIV 77 (101)
T ss_dssp CBCSSSCCBCCSSSCEEEETTEEEETTTCCCSSSCCCTTSSCCEEETTEEECHHHHTTCC---CCBCSSSCCBCC
T ss_pred CcCcccCCcccCCceEEEECccChhhcCCcccccCCCCCcCeeECcCCEEEChhHhhhhc---CCccccCCCccc
Confidence 46999998884 3333334558999999999998776543332 33444443221 236777776554
No 315
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=25.23 E-value=42 Score=26.57 Aligned_cols=34 Identities=24% Similarity=0.559 Sum_probs=21.5
Q ss_pred CccCCCCCCCCCCCCccccccccccccccccccHHhhhc
Q 002201 413 KRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKS 451 (954)
Q Consensus 413 c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~k 451 (954)
-..|..||++..- .|.+ .. ...+||+.|+.-+++
T Consensus 4 ~~~C~~C~tt~Tp-~WR~---gp-~G~~LCNaCGl~~k~ 37 (46)
T 1gnf_A 4 ARECVNCGATATP-LWRR---DR-TGHYLCNACGLYHKM 37 (46)
T ss_dssp SCCCTTTCCCCCS-SCBC---CT-TCCCBCSHHHHHHHH
T ss_pred CCCCCCcCCCCCC-cCcc---CC-CCCccchHHHHHHHH
Confidence 3579999987532 2322 12 235899999876653
No 316
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=25.13 E-value=36 Score=28.35 Aligned_cols=36 Identities=22% Similarity=0.551 Sum_probs=25.2
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
..-.+|-+|.+..- --....++|..|..-+|..|..
T Consensus 22 ~~pt~C~~C~~~l~-Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 22 TTPTYCYECEGLLW-GIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp SSCCCCTTTCCCCC-SSCCEEEEETTTCCEECTTHHH
T ss_pred CCCcChhhcChhhc-ccCcceeEcCCCCCeeCHHHHh
Confidence 45566777765431 1234679999999999999963
No 317
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=25.10 E-value=26 Score=30.31 Aligned_cols=28 Identities=21% Similarity=0.544 Sum_probs=23.3
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAE 483 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~ 483 (954)
-|| |+..+--+++..|.+|. |..-++..
T Consensus 6 ~C~-C~~~~~~~~~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 6 RCD-CGRALYSREGAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp EET-TSCCEEEETTCSEEEET-TTEEEECC
T ss_pred ECC-CCCEEEEcCCCcEEECC-CCCeeeec
Confidence 389 99988888888999997 99777765
No 318
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=24.96 E-value=30 Score=30.83 Aligned_cols=20 Identities=20% Similarity=0.556 Sum_probs=16.3
Q ss_pred CCCCeeeCCCCCceeecccc
Q 002201 466 DGGSWVRCDGCKVWVHAECD 485 (954)
Q Consensus 466 d~~~~VqCd~C~~WvH~~Cd 485 (954)
++...++|+.|.-||..-=+
T Consensus 41 ~ge~iv~C~sCSL~I~V~~~ 60 (83)
T 1yop_A 41 EGEKVAVCPSCSLMIDVVFD 60 (83)
T ss_dssp TTCCEEECSSSCCEEECBCC
T ss_pred CCCEEEECCCCccEEEEEEc
Confidence 34679999999999988644
No 319
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=24.95 E-value=25 Score=28.82 Aligned_cols=30 Identities=30% Similarity=0.753 Sum_probs=21.6
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
.+|-.|+... .+..++|..|..-+|..|..
T Consensus 23 t~C~~C~~~i----~kqg~kC~~C~~~cH~kC~~ 52 (59)
T 1rfh_A 23 GWCDLCGREV----LRQALRCANCKFTCHSECRS 52 (59)
T ss_dssp EECTTTCSEE----CSCCEECTTTSCEECHHHHT
T ss_pred eEchhcchhh----hhCccEeCCCCCeEehhhhh
Confidence 3455554444 35679999999999999963
No 320
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=24.61 E-value=43 Score=28.76 Aligned_cols=42 Identities=26% Similarity=0.628 Sum_probs=25.3
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeecccccccccc-ccccCCCcccCCcccccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSH-FKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~-~e~~~~~~Y~Cp~Cr~k~ 509 (954)
-.|.+|+-+|+...+.. . .+|.... +++++ .+|.||.|....
T Consensus 8 y~C~vCGyiYd~~~Gdp-------------~-~gi~pGT~f~~lP-ddw~CP~Cga~K 50 (70)
T 1dx8_A 8 YECEACGYIYEPEKGDK-------------F-AGIPPGTPFVDLS-DSFMCPACRSPK 50 (70)
T ss_dssp EEETTTCCEECTTTCCT-------------T-TTCCSSCCGGGSC-TTCBCTTTCCBG
T ss_pred EEeCCCCEEEcCCCCCc-------------c-cCcCCCCchhhCC-CCCcCCCCCCCH
Confidence 34888888888765410 0 1233322 45553 589999998643
No 321
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=24.50 E-value=38 Score=30.12 Aligned_cols=33 Identities=30% Similarity=0.506 Sum_probs=23.5
Q ss_pred CccccccccccCCCCCCeeeCCCCCceeecccc
Q 002201 453 HFCGICKKVWNHSDGGSWVRCDGCKVWVHAECD 485 (954)
Q Consensus 453 ~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd 485 (954)
.+|-+|++.-.......-..|-.|++-||.+|-
T Consensus 39 s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~ 71 (84)
T 1r79_A 39 AKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCK 71 (84)
T ss_dssp CBCSSSCCBCCCTTTCCCEEESSSCCEECHHHH
T ss_pred CEeCCCCCEeCCccCCCCCCCcccChhHHHHHH
Confidence 456677765443333345689999999999995
No 322
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.39 E-value=59 Score=29.69 Aligned_cols=47 Identities=19% Similarity=0.435 Sum_probs=32.1
Q ss_pred hhcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccc
Q 002201 449 MKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKF 509 (954)
Q Consensus 449 ~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~ 509 (954)
......||||...+.+. +.-..|.+-|+..|....- ...||.|+...
T Consensus 19 l~~~~~C~IC~~~~~~p-----v~~~~CgH~fC~~Ci~~~~---------~~~CP~Cr~~~ 65 (117)
T 1jm7_B 19 LEKLLRCSRCTNILREP-----VCLGGCEHIFCSNCVSDCI---------GTGCPVCYTPA 65 (117)
T ss_dssp HHHTTSCSSSCSCCSSC-----BCCCSSSCCBCTTTGGGGT---------TTBCSSSCCBC
T ss_pred chhCCCCCCCChHhhCc-----cEeCCCCCHHHHHHHHHHh---------cCCCcCCCCcC
Confidence 34566799998877532 3333688999999953221 17899999765
No 323
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.34 E-value=77 Score=26.39 Aligned_cols=24 Identities=21% Similarity=0.645 Sum_probs=17.6
Q ss_pred cccccccccHHhhhcCCcccccccccc
Q 002201 437 GDQLFCRTCAKLMKSKHFCGICKKVWN 463 (954)
Q Consensus 437 ~~~~lC~~C~~l~~kg~yCpiC~k~y~ 463 (954)
++.-+|..|.+. -..||+|.....
T Consensus 34 gH~~~C~~C~~~---~~~CP~CR~~i~ 57 (68)
T 2ea5_A 34 RHTCLCDGCVKY---FQQCPMCRQFVQ 57 (68)
T ss_dssp TBCCSCTTHHHH---CSSCTTTCCCCC
T ss_pred CChhhhHHHHhc---CCCCCCCCcchh
Confidence 355599999874 367999987543
No 324
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=23.89 E-value=27 Score=31.20 Aligned_cols=30 Identities=27% Similarity=0.472 Sum_probs=25.3
Q ss_pred eeEeeeccC-CCeeeecCCcCcccchhhhhh
Q 002201 736 KICVICKQI-HGSCTQCCKCSTYYHAMCASR 765 (954)
Q Consensus 736 ~~C~iC~~~-~Ga~IqC~~C~~aFHv~CA~~ 765 (954)
..|.+|+.. .|..-.|..|.-.+|+.||..
T Consensus 48 ~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~ 78 (89)
T 1v5n_A 48 YTCDKCEEEGTIWSYHCDECDFDLHAKCALN 78 (89)
T ss_dssp CCCTTTSCCCCSCEEECTTTCCCCCHHHHHC
T ss_pred eEeCCCCCcCCCcEEEcCCCCCeEcHHhcCC
Confidence 469999975 566789999999999999964
No 325
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=23.86 E-value=1.2e+02 Score=30.20 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=44.1
Q ss_pred CCCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCccch
Q 002201 256 PEDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVDFV 331 (954)
Q Consensus 256 ~~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e~~ 331 (954)
+..+.+||+|=|+....--|+.|+|.... .+.+.|+|-+ -.++..|+...|.|....+
T Consensus 49 ~~~~~~g~~c~a~~~~d~~wyRa~V~~v~------------~~~~~V~~vD------yG~~~~v~~~~l~~l~~~~ 106 (218)
T 2wac_A 49 SYTPKRGDLVAAQFTLDNQWYRAKVERVQ------------GSNATVLYID------YGNKETLPTNRLAALPPAF 106 (218)
T ss_dssp SCCCCTTCEEEEECTTTCCEEEEEEEEEE------------TTEEEEEETT------TCCEEEEEGGGEEECCGGG
T ss_pred CccCCcCCEEEEEECCCCeEEEEEEEEec------------CCeEEEEEEe------cCCeEEEchHHcccCChhh
Confidence 44578999999998213569999998543 1468898877 6688889999999887543
No 326
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=23.39 E-value=34 Score=29.77 Aligned_cols=38 Identities=21% Similarity=0.437 Sum_probs=23.2
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccHHhhhc
Q 002201 414 RPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMKS 451 (954)
Q Consensus 414 ~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~k 451 (954)
..|..|+..+.+....-....||.+.+.|..|.+....
T Consensus 26 ~~C~~C~~~I~~~~~~a~~~~~H~~CF~C~~C~~~L~~ 63 (89)
T 1x64_A 26 PLCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQ 63 (89)
T ss_dssp CBCTTTCCBCCSCCEESSSCEECTTTCCCSSSCCCTTT
T ss_pred CCcccCCCEecccEEEECCceECccCCEecCCCCCCCC
Confidence 45777776665543333345677777777777655543
No 327
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=23.23 E-value=39 Score=28.54 Aligned_cols=14 Identities=29% Similarity=0.778 Sum_probs=10.7
Q ss_pred CcccCCcccccccc
Q 002201 498 SEYYCPACKAKFNF 511 (954)
Q Consensus 498 ~~Y~Cp~Cr~k~~~ 511 (954)
..|.|+.|...+..
T Consensus 64 ~~~~C~~C~~~f~~ 77 (95)
T 2yt9_A 64 KPYICQSCGKGFSR 77 (95)
T ss_dssp SSBCCSSSCCCBSS
T ss_pred CceECCCccchhCC
Confidence 57999999876644
No 328
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.09 E-value=29 Score=28.55 Aligned_cols=14 Identities=29% Similarity=0.562 Sum_probs=7.3
Q ss_pred CCCccCCCCCCCCC
Q 002201 411 KDKRPCDGCGMTLP 424 (954)
Q Consensus 411 k~c~~C~~CG~~~~ 424 (954)
..|-.|..|+..+.
T Consensus 29 ~~CF~C~~C~~~L~ 42 (70)
T 2d8z_A 29 KECFVCTACRKQLS 42 (70)
T ss_dssp TTTSBCSSSCCBCT
T ss_pred CCCCccCCCCCcCC
Confidence 45555555555543
No 329
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=22.62 E-value=38 Score=29.03 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=24.0
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISS 489 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~ 489 (954)
.||+|+....-+.....+.|..|.+++=.. |+|..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~-dGIPv 44 (69)
T 2pk7_A 10 ACPICKGPLKLSADKTELISKGAGLAYPIR-DGIPV 44 (69)
T ss_dssp CCTTTCCCCEECTTSSEEEETTTTEEEEEE-TTEEC
T ss_pred eCCCCCCcCeEeCCCCEEEcCCCCcEecCc-CCeee
Confidence 478887665544445678888888887776 66544
No 330
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=22.10 E-value=34 Score=29.26 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=23.2
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISS 489 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~ 489 (954)
.||+|+....-+.....+.|..|.+++=.. |+|..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~-dGIPv 44 (68)
T 2hf1_A 10 VCPLCKGPLVFDKSKDELICKGDRLAFPIK-DGIPM 44 (68)
T ss_dssp BCTTTCCBCEEETTTTEEEETTTTEEEEEE-TTEEC
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCCcEecCC-CCeee
Confidence 477777655444445677788888887766 55544
No 331
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=21.78 E-value=35 Score=29.17 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=22.4
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISS 489 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~ 489 (954)
.||+|+....-+.....+.|..|.+++=.. |+|..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~-dGIPv 44 (68)
T 2jr6_A 10 VCPVTKGRLEYHQDKQELWSRQAKLAYPIK-DGIPY 44 (68)
T ss_dssp BCSSSCCBCEEETTTTEEEETTTTEEEEEE-TTEEC
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCCcEecCC-CCeee
Confidence 477776654444445677788888777766 55544
No 332
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=21.77 E-value=81 Score=29.82 Aligned_cols=54 Identities=15% Similarity=-0.005 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFV 328 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~ 328 (954)
.+..+||-||||-. +-++..|.|++-. . .--+.|.|=+ -.---++.+..|.-+.
T Consensus 4 ~~v~vGq~V~akh~-ngryy~~~V~~~~----~-------~~~y~V~F~D------gS~s~dl~peDIvs~d 57 (118)
T 2qqr_A 4 QSITAGQKVISKHK-NGRFYQCEVVRLT----T-------ETFYEVNFDD------GSFSDNLYPEDIVSQD 57 (118)
T ss_dssp SCCCTTCEEEEECT-TSSEEEEEEEEEE----E-------EEEEEEEETT------SCEEEEECGGGBCSSC
T ss_pred ceeccCCEEEEECC-CCCEEeEEEEEEe----e-------EEEEEEEcCC------CCccCCCCHhhccccc
Confidence 46789999999996 5677799998643 1 1246777766 3333456666665553
No 333
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=21.55 E-value=19 Score=32.80 Aligned_cols=50 Identities=22% Similarity=0.375 Sum_probs=33.7
Q ss_pred hcCCccccccccccCCCCCCeeeCCCCCceeeccccccccccccccCCCcccCCcccccccc
Q 002201 450 KSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISSSHFKDLGGSEYYCPACKAKFNF 511 (954)
Q Consensus 450 ~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~~~~e~~~~~~Y~Cp~Cr~k~~~ 511 (954)
.....||||...+.+ -+. ..|.+.||..|....-. .....||.|+.....
T Consensus 21 ~~~~~C~IC~~~~~~-----p~~-~~CgH~fC~~Ci~~~~~------~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 21 VKSISCQICEHILAD-----PVE-TSCKHLFCRICILRCLK------VMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHTBCTTTCSBCSS-----EEE-CTTSCEEEHHHHHHHHH------HTCSBCTTTCCBCCG
T ss_pred cCCCCCCCCCcHhcC-----cEE-cCCCCcccHHHHHHHHh------HCcCcCCCCCCCCCH
Confidence 345679999877642 344 47999999999632221 124689999977643
No 334
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=21.39 E-value=55 Score=28.16 Aligned_cols=37 Identities=19% Similarity=0.531 Sum_probs=26.1
Q ss_pred hhcCCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 449 MKSKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 449 ~~kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
+..-.+|-+|.+..- --....++|..|..-+|..|..
T Consensus 31 f~~pt~C~~C~~~lw-Gl~kqG~~C~~C~~~~Hk~C~~ 67 (77)
T 2enn_A 31 FPQPTFCSVCHEFVW-GLNKQGYQCRQCNAAIHKKCID 67 (77)
T ss_dssp CSSCEECSSSCCEEC-CTTCCEEECSSSCCEEESGGGS
T ss_pred CCCCcCccccChhhc-cccccccCcCCCCCcCCHhHHh
Confidence 345566777766432 1235689999999999999963
No 335
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=21.29 E-value=43 Score=30.98 Aligned_cols=13 Identities=15% Similarity=0.424 Sum_probs=6.7
Q ss_pred CCCccCCCCCCCC
Q 002201 411 KDKRPCDGCGMTL 423 (954)
Q Consensus 411 k~c~~C~~CG~~~ 423 (954)
..|-.|..|+..+
T Consensus 34 ~~CF~C~~C~~~L 46 (123)
T 2l3k_A 34 LECFKCAACQKHF 46 (123)
T ss_dssp TTTCBCTTTCCBC
T ss_pred cccCccccCCCCC
Confidence 3455555555554
No 336
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=21.28 E-value=35 Score=29.35 Aligned_cols=35 Identities=14% Similarity=0.359 Sum_probs=23.9
Q ss_pred ccccccccccCCCCCCeeeCCCCCceeecccccccc
Q 002201 454 FCGICKKVWNHSDGGSWVRCDGCKVWVHAECDKISS 489 (954)
Q Consensus 454 yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~~~~ 489 (954)
.||+|+....-+.....+.|..|.+++=.. |+|..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~-dGIPv 44 (70)
T 2js4_A 10 VCPVCKGRLEFQRAQAELVCNADRLAFPVR-DGVPI 44 (70)
T ss_dssp BCTTTCCBEEEETTTTEEEETTTTEEEEEE-TTEEC
T ss_pred ECCCCCCcCEEeCCCCEEEcCCCCceecCC-CCeee
Confidence 477777665544445678888888888777 66654
No 337
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=21.20 E-value=38 Score=28.18 Aligned_cols=33 Identities=30% Similarity=0.609 Sum_probs=24.6
Q ss_pred CCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 452 KHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 452 g~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
..+|-+|++.+. -++..+.|..|...+|.+|-.
T Consensus 19 ~~~C~~Cg~~i~--~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 19 PESCVPCGKRIK--FGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp CEECTTTCCEEC--TTCEEEEESSSSCEECGGGGG
T ss_pred CcccccccCEEE--EeeEeeECCCCCCeEchhHhh
Confidence 445666666553 446789999999999999963
No 338
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=21.14 E-value=44 Score=29.72 Aligned_cols=30 Identities=27% Similarity=0.609 Sum_probs=23.8
Q ss_pred CCcccccCCCccCCCCceEEcC--CCCccccCccc
Q 002201 636 TERCAVCRWVEDWDYNKIIICN--RCQIAVHQECY 668 (954)
Q Consensus 636 ~~~C~VC~~~e~~~~~~Li~C~--~C~~avH~~Cy 668 (954)
...|.+|.... .+.-|.|. .|..+||..|-
T Consensus 17 ~l~C~iC~~~~---~GAciqC~~~~C~~~fHv~CA 48 (87)
T 2lq6_A 17 KLTCYLCKQKG---VGASIQCHKANCYTAFHVTCA 48 (87)
T ss_dssp CCCBTTTTBCC---SSCEEECSCTTTCCEEEHHHH
T ss_pred cCCCcCCCCCC---CcEeEecCCCCCCCcCcHHHH
Confidence 56899997531 26889997 59999999996
No 339
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.00 E-value=2e+02 Score=24.63 Aligned_cols=55 Identities=15% Similarity=0.035 Sum_probs=42.1
Q ss_pred CCCCCCCEEEEecCCCCCcccEEEeCCCCCCChhhhccCCCCeEEEEEccccCCCCCCcEEEeeCCceecCcc
Q 002201 257 EDFYSGDIVWAKSGKNYPYWPAIVIDPMTQAPDVVLRSCIPDAACVMFFGHCGDVNQRDYAWVKRGLIFPFVD 329 (954)
Q Consensus 257 ~~f~~GDlVWAK~g~~yPwWPa~V~dp~~~~p~~v~~~~~~~~~~V~FFG~s~~~~s~dyaWv~~~~i~Pf~e 329 (954)
..|..|+=|-|+-. ---+.||-|..-. ......+|+|++ ++-.|+.-+.|.++..
T Consensus 8 ~~f~eGqdVLarWs-DGlfYlGtV~kV~----------~~~~~ClV~FeD-------~s~~wv~~kdi~~~~~ 62 (68)
T 2e5p_A 8 PRLWEGQDVLARWT-DGLLYLGTIKKVD----------SAREVCLVQFED-------DSQFLVLWKDISPAAL 62 (68)
T ss_dssp CCCCTTCEEEEECT-TSSEEEEEEEEEE----------TTTTEEEEEETT-------TEEEEEETTTEECCCS
T ss_pred cccccCCEEEEEec-CCcEEEeEEEEEe----------cCCcEEEEEEcc-------CCeeeeeeeccccccc
Confidence 56999999999984 3568999997433 113457888887 7788999999988864
No 340
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=20.69 E-value=48 Score=27.42 Aligned_cols=35 Identities=26% Similarity=0.603 Sum_probs=24.2
Q ss_pred cCCccccccccccCCCCCCeeeCCCCCceeeccccc
Q 002201 451 SKHFCGICKKVWNHSDGGSWVRCDGCKVWVHAECDK 486 (954)
Q Consensus 451 kg~yCpiC~k~y~~~d~~~~VqCd~C~~WvH~~Cd~ 486 (954)
+-.+|.+|++..- --...-++|..|+.-+|..|..
T Consensus 19 ~pt~C~~C~~~l~-Gl~~qg~~C~~C~~~~Hk~C~~ 53 (65)
T 3uej_A 19 SPTFCDHCGSLLW-GLVKQGLKCEDCGMNVHHKCRE 53 (65)
T ss_dssp SCCBCTTTCCBCC-SSSSCEEEETTTCCEECHHHHT
T ss_pred CCCcccccChhhh-ccCceeeECCCCCCeEchhHhh
Confidence 4456666665421 1234679999999999999964
No 341
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.60 E-value=33 Score=29.07 Aligned_cols=38 Identities=21% Similarity=0.406 Sum_probs=25.3
Q ss_pred CccCCCCCCCCCCCCccccccccccccccccccHHhhh
Q 002201 413 KRPCDGCGMTLPSKSAKKIKASTTGDQLFCRTCAKLMK 450 (954)
Q Consensus 413 c~~C~~CG~~~~~~~~~k~~~~w~~~~~lC~~C~~l~~ 450 (954)
-..|..|+..+.+....-....||.+.+.|..|.+...
T Consensus 15 ~~~C~~C~~~I~~~~~~a~~~~~H~~CF~C~~C~~~L~ 52 (79)
T 1x62_A 15 LPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLK 52 (79)
T ss_dssp CCCCSSSCCCCCSSCEECSSCEECTTTTSCSSSCCCHH
T ss_pred CCccccCCCCccCcEEEECcceeCcCcCeeCCCCCCCC
Confidence 34588888777654444445578888888888865544
No 342
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.38 E-value=39 Score=27.83 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=7.5
Q ss_pred CCCccCCCCCCCCCC
Q 002201 411 KDKRPCDGCGMTLPS 425 (954)
Q Consensus 411 k~c~~C~~CG~~~~~ 425 (954)
..|-.|..|+..+..
T Consensus 31 ~~CF~C~~C~~~L~~ 45 (72)
T 1wyh_A 31 EHCFLCSGCEQPLGS 45 (72)
T ss_dssp TTTCBCTTTCCBTTT
T ss_pred cccCeECCCCCcCCC
Confidence 345555555555443
Done!