Query 002202
Match_columns 954
No_of_seqs 310 out of 950
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 18:50:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002202.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002202hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2119 Predicted bile acid be 100.0 7E-221 1E-225 1845.7 59.4 856 25-950 20-879 (879)
2 COG4354 Predicted bile acid be 100.0 2E-122 4E-127 1027.5 50.5 680 91-897 9-720 (721)
3 PF04685 DUF608: Protein of un 100.0 5.9E-84 1.3E-88 728.3 9.2 360 530-892 1-365 (365)
4 PF12215 GBA2_N: beta-Glucocer 100.0 8.7E-67 1.9E-71 577.2 33.7 291 96-414 1-299 (299)
5 PF06202 GDE_C: Amylo-alpha-1, 100.0 4E-29 8.8E-34 284.5 31.2 302 540-893 25-368 (370)
6 COG3408 GDB1 Glycogen debranch 99.9 1.7E-25 3.6E-30 267.8 27.4 309 540-902 279-615 (641)
7 TIGR01561 gde_arch glycogen de 99.9 2.3E-22 5.1E-27 237.9 24.1 243 540-826 288-566 (575)
8 PRK10137 alpha-glucosidase; Pr 99.9 6.2E-21 1.3E-25 229.9 28.4 300 546-873 350-759 (786)
9 TIGR01577 oligosac_amyl oligos 99.9 4.7E-17 1E-21 197.5 54.8 282 547-889 299-602 (616)
10 TIGR01531 glyc_debranch glycog 99.8 4.4E-19 9.6E-24 220.4 26.3 291 555-894 1050-1458(1464)
11 PF03512 Glyco_hydro_52: Glyco 99.8 1.1E-17 2.4E-22 183.6 17.7 300 201-638 98-416 (428)
12 COG3459 Cellobiose phosphoryla 99.7 4.1E-15 8.8E-20 177.6 36.3 264 543-850 612-922 (1056)
13 TIGR01535 glucan_glucosid gluc 99.6 3.8E-11 8.3E-16 144.9 49.5 504 186-873 58-598 (648)
14 PF05592 Bac_rhamnosid: Bacter 99.5 1.9E-13 4E-18 162.8 17.0 294 547-915 153-468 (509)
15 PRK13271 treA trehalase; Provi 99.3 2.3E-10 4.9E-15 135.8 26.5 269 547-872 164-504 (569)
16 PLN03005 beta-fructofuranosida 99.3 4.6E-10 1E-14 127.8 26.9 252 619-894 203-515 (550)
17 PF01204 Trehalase: Trehalase; 99.3 1.5E-10 3.2E-15 137.7 21.0 277 547-873 133-479 (512)
18 PLN02567 alpha,alpha-trehalase 99.3 1.6E-09 3.5E-14 129.1 28.8 276 547-873 157-513 (554)
19 PLN02973 beta-fructofuranosida 99.2 2E-09 4.3E-14 123.0 26.3 253 619-894 224-536 (571)
20 PLN02703 beta-fructofuranosida 99.2 2.5E-09 5.4E-14 122.8 26.6 251 618-892 255-566 (618)
21 PRK13272 treA trehalase; Provi 99.2 2.3E-09 5E-14 126.3 27.1 270 547-873 165-505 (542)
22 PRK13270 treF trehalase; Provi 99.2 7.5E-09 1.6E-13 122.4 26.9 268 547-873 176-514 (549)
23 COG3387 SGA1 Glucoamylase and 99.1 1.4E-08 3.1E-13 122.6 24.6 297 547-889 289-593 (612)
24 PF12899 Glyco_hydro_100: Alka 99.0 1.2E-07 2.5E-12 106.7 25.4 250 619-895 115-428 (436)
25 PF03200 Glyco_hydro_63: Manno 98.6 4.5E-06 9.7E-11 103.9 24.5 268 554-849 408-750 (801)
26 KOG0602 Neutral trehalase [Car 98.2 7.2E-05 1.6E-09 88.6 18.6 273 554-874 196-533 (600)
27 COG1626 TreA Neutral trehalase 98.1 0.00041 9E-09 80.9 24.1 257 546-854 175-503 (558)
28 PF00723 Glyco_hydro_15: Glyco 97.9 0.00026 5.6E-09 83.6 16.7 191 625-835 125-349 (448)
29 PF06824 DUF1237: Protein of u 97.5 0.0013 2.8E-08 75.7 13.3 234 629-889 131-414 (424)
30 KOG3625 Alpha amylase [Carbohy 96.8 0.06 1.3E-06 66.0 18.8 186 689-892 1264-1508(1521)
31 PRK13807 maltose phosphorylase 96.3 0.25 5.4E-06 62.1 21.0 86 627-716 426-517 (756)
32 KOG2161 Glucosidase I [Carbohy 96.1 0.32 7E-06 59.0 19.2 214 629-850 505-797 (849)
33 COG3538 Uncharacterized conser 96.0 0.41 8.8E-06 53.7 18.0 247 630-902 139-430 (434)
34 PF08760 DUF1793: Domain of un 95.4 0.1 2.2E-06 53.6 9.8 92 702-807 2-98 (171)
35 PF03632 Glyco_hydro_65m: Glyc 95.3 0.013 2.8E-07 67.5 3.6 98 628-729 107-216 (370)
36 cd07430 GH15_N Glycoside hydro 95.2 1.8 3.8E-05 47.8 19.5 146 185-372 82-227 (260)
37 cd00249 AGE AGE domain; N-acyl 93.7 2.6 5.6E-05 48.4 17.6 94 631-742 58-159 (384)
38 KOG4125 Acid trehalase [Carboh 91.6 0.86 1.9E-05 52.6 9.4 107 626-735 368-478 (682)
39 cd00249 AGE AGE domain; N-acyl 89.0 35 0.00076 39.1 20.2 201 631-855 120-335 (384)
40 COG1554 ATH1 Trehalose and mal 83.2 11 0.00024 47.2 12.5 83 626-712 434-522 (772)
41 COG4225 Predicted unsaturated 81.8 20 0.00043 40.8 12.7 20 631-650 41-60 (357)
42 PF07971 Glyco_hydro_92: Glyco 81.4 14 0.00031 44.6 12.4 168 703-908 244-436 (502)
43 PF06205 GT36_AF: Glycosyltran 80.2 7.4 0.00016 35.8 7.5 29 344-372 56-84 (90)
44 KOG2119 Predicted bile acid be 78.4 2.6 5.5E-05 51.4 4.7 92 116-219 147-238 (879)
45 PF07470 Glyco_hydro_88: Glyco 76.7 35 0.00077 38.7 13.4 107 622-738 120-229 (336)
46 PF07221 GlcNAc_2-epim: N-acyl 75.8 11 0.00024 42.9 9.0 198 631-855 85-308 (346)
47 PF03663 Glyco_hydro_76: Glyco 72.8 16 0.00036 42.3 9.4 101 627-740 156-261 (370)
48 COG2942 N-acyl-D-glucosamine 2 69.0 2E+02 0.0044 33.6 16.7 214 629-864 118-348 (388)
49 PF07221 GlcNAc_2-epim: N-acyl 66.6 1.2E+02 0.0026 34.5 14.7 90 632-740 27-120 (346)
50 COG4833 Predicted glycosyl hyd 61.4 16 0.00035 40.1 5.7 103 631-747 153-259 (377)
51 PF06165 Glyco_transf_36: Glyc 52.0 59 0.0013 31.0 7.5 56 179-243 30-85 (110)
52 cd04791 LanC_SerThrkinase Lant 46.5 1.6E+02 0.0035 32.7 11.2 137 624-793 137-275 (321)
53 PF09137 Glucodextran_N: Gluco 44.8 4.9E+02 0.011 29.1 14.1 164 196-422 93-263 (269)
54 PF03663 Glyco_hydro_76: Glyco 40.1 68 0.0015 37.2 7.0 107 619-747 87-204 (370)
55 COG3537 Putative alpha-1,2-man 38.4 3.5E+02 0.0075 33.8 12.3 61 831-906 614-674 (768)
56 COG1331 Highly conserved prote 37.1 2.5E+02 0.0055 35.1 11.3 99 629-743 212-318 (667)
57 PF07721 TPR_4: Tetratricopept 32.8 72 0.0016 22.1 3.5 24 825-848 2-25 (26)
58 KOG2429 Glycosyl hydrolase, fa 22.5 1.8E+02 0.0039 35.4 6.4 138 704-873 203-359 (622)
59 PF13428 TPR_14: Tetratricopep 21.4 1.9E+02 0.0041 22.3 4.5 29 826-854 3-31 (44)
60 COG2942 N-acyl-D-glucosamine 2 20.8 1.4E+03 0.031 26.9 13.3 93 636-744 250-350 (388)
No 1
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-221 Score=1845.67 Aligned_cols=856 Identities=59% Similarity=1.036 Sum_probs=805.2
Q ss_pred cCCCCCCcchhhhccccCCCCCCCCcccCHHHHhhhccchhhhHHHHHHHHhcCCcCCCCccccccCCCccccccccccc
Q 002202 25 KVDPAKPASLTWQRKLSTGEIPLSQFTLNWKETVQLAPIGVRILCLIREEAAKGKRAFIDPFIKRHLTSSHGVPLGGVGS 104 (954)
Q Consensus 25 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~gvPLGGIG~ 104 (954)
++|.++++.+||||++|.+ +++|.++++|+++++| |+|.|+++|+.+||+.|||+|+++++++.+||||||||+
T Consensus 20 ~~~~a~~~a~~~rr~~~~~---~r~f~~~~~e~~~l~~---r~~~~~~~e~~~grk~~id~f~k~~~~~~~gVPlGGiG~ 93 (879)
T KOG2119|consen 20 DLDGAGWKARGWRRPLDSN---PREFFLSIREAIKLVP---RLWLYTREEAWNGRKAFIDIFNKENHKSSHGVPLGGIGC 93 (879)
T ss_pred cccccCCcccccccccCCC---CccCchhHHHHhhhhh---hhhhhhhhhhhCCcccceecccccccccccccccccccc
Confidence 6999999999999999998 8999999999999999 999999999999999999999999999999999999999
Q ss_pred ceeeecCCcceEEEEEcCCCCCCCcccCCCcEEEEEecCCeeeEeecCCCCCccccccccCCCCCCccCCCCCceeEEee
Q 002202 105 GSIGRSYRGEFQRWQIFPRVCEDKPVLANQFSVFVSRSNGQKYSSVLCPKTPEVLKDTTAAGIGSWDWNLKGDKSTYHAL 184 (954)
Q Consensus 105 GsI~~~~~G~f~~w~i~~~~~~~~~~~~~qF~v~~~~~~~~~~~~VL~~~~~~~~~~~~~~gl~~w~w~~~~~~~~y~al 184 (954)
|+|||+++|+||+|+|+|++|++.++++|||++||+++++++|++||++..|. ....+..||++|+|++++++++||||
T Consensus 94 GsIgr~frGeF~~f~l~Pgi~e~~~~~~nQF~~~vs~~~g~iy~svLs~~~~~-c~~~~~~gl~sWd~ni~~~~~~Y~~L 172 (879)
T KOG2119|consen 94 GSIGRDFRGEFQRFQLFPGICEEEPVLANQFIVFVSRPGGKIYQSVLSPGDPQ-CGQRPATGLSSWDWNIPGEKSTYHGL 172 (879)
T ss_pred ccccCccCCccceEEecCcccccchhhhceEEEEEEcCCceEEEEeecCCCcc-cccCCCCCccccccccCCcceeEeee
Confidence 99999999999999999999999999999999999999999999999988876 33456789999999999999999999
Q ss_pred cceeEEeeccCCCCCeEEEEEEecccccCCcccCCCceEEEEEEEEeCCCCeEEEEEEEEecCCCCCCCcCCCccccccc
Q 002202 185 YPRAWTVHEGEPDPELRIVCRQISPIIPHNYKESSYPVSVFTYTIYNSGKTSADITLLFTWTNSVGGDSEFTGQHYNSKT 264 (954)
Q Consensus 185 yP~aw~~y~~~~~~~v~v~~~~~SP~IP~d~k~SSlPvavf~~~v~N~~~~~~~vsi~ft~~N~vG~~~~~~~~~~n~~~ 264 (954)
|||+||+|++.+++ ++|+|||+||||||||.+||||+|||+|+|+|++.++++|||+|||+|++|+.+..+++|+|+..
T Consensus 173 ~PRsWt~y~~~~~~-l~v~~rqvsp~ip~~y~dsslP~a~fv~~v~N~~~~e~~vsl~ft~~n~~g~~~~~~~~~~~s~~ 251 (879)
T KOG2119|consen 173 FPRSWTEYDGEPDG-LTVVCRQVSPVIPHNYRDSSLPVAVFVFTVENTGKEEAEVSLLFTFRNGTGNRSGLSGGHFNSQK 251 (879)
T ss_pred cCceeEEeeccccc-cEEEEeecccccccccccccCcceEEEEEccccccceEEEEEEEEEecCCCccccccccccchhh
Confidence 99999999988888 99999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCeeEEEeeecCCCCCCceEEEEEEecCCCeEEEEeceeeecCCCcccchHHHHHHHHhcCCCCCCCCccCCCCCCC
Q 002202 265 KMNDGVHAVLLHHRTSHQLPPVTFALAAQETDGVHVSLCPHFVISGNSLGLTAKDMWHEIKEHGSFDRLNSMETSVTSEP 344 (954)
Q Consensus 265 ~~~~~v~Gv~l~~~~~~~~~~~t~aiaa~~~~~v~vs~~~~f~~~~~~~~~~~~~~W~~~~~~G~l~~~~~~~~~~~s~~ 344 (954)
+......|+.+.|. ++.+|+||||||+++++++||+||||+|+|.+ ++||++++++|+|++.+. ++.|+.+
T Consensus 252 ~~~~~~~~~~~~~~--~~~~P~Tyaiaa~~t~~~~VT~cp~Fdpsg~g-----~~lW~~lkq~G~~d~~~~--~s~ps~~ 322 (879)
T KOG2119|consen 252 IQLKTMVGVSLRTT--NGHMPVTYAIAARETEGVTVTVCPCFDPSGTG-----KDLWDDLKQNGSLDSLTS--PSEPSKP 322 (879)
T ss_pred hhhcccccceeecc--CCCCCeeEEeeeeccCCceEEEecccccCCcH-----HHHHHHHHhcCCCCCCCC--CCccCCC
Confidence 66666788888764 45689999999999999999999999999987 999999999999999754 7789999
Q ss_pred CCceeEEEEEEEEecCCCeEEEEEEEEeecCccccc-CCcceecccccccCCccchHHHHHHHHHHhhhhHHHHHHHhcc
Q 002202 345 GSSIGAAIAASVTVPPDSEGQVTFSLAWDCPEVNFM-SGKTYYRRYTKFYGTHQNAAANIARDAILEHGSWELQIEAWQR 423 (954)
Q Consensus 345 g~~~~~ava~~~~l~pg~~~tv~F~LaW~~P~~~f~-~g~~~~rrYt~ff~~~~~~a~~ia~~al~~~~~we~~i~~wq~ 423 (954)
|+.||+|||++++|+|+++++++|+|+||||+|+|+ +++.|+|||||||++.+++|++|||+||.+|.+||++|++||+
T Consensus 323 g~~ig~AVc~s~~v~P~~~~~~~FsLsWdmPkv~Fg~~~~ty~RrYTrFfg~~g~aa~ai~h~AL~~~~~WE~~IeaWQ~ 402 (879)
T KOG2119|consen 323 GDSIGAAVCASVKVPPGGSHTVTFSLSWDMPKVHFGTKERTYHRRYTRFFGGAGDAAAAICHDALRNYSTWEEKIEAWQS 402 (879)
T ss_pred CCeeeEEEEEeeEeCCCCceeEEEEEEecCcccccccccceeeeeeehhcCCCcchHHHHHHHHHhchhHHHHHHHHhhc
Confidence 999999999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcccccccchhhhhccCceeeecCCCCccccccccccccccccccccccccccCCCCCchhHHHHHhhhhh
Q 002202 424 PILEDKRLPEWYPITLFNELYYLNAGGAVWTDGSPPVHSLVTIGHRKFSLDWSQSDLKRIVDVPNQNDTAVNILERMSSI 503 (954)
Q Consensus 424 pil~d~~lP~Wyk~alfNely~l~~Ggt~w~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (954)
|||+|++||+|||+|||||||||+||||+|++.. +.++.
T Consensus 403 PiL~D~~LPeWYk~alFNELYfi~dGGTvW~e~~------------~~sl~----------------------------- 441 (879)
T KOG2119|consen 403 PILNDEKLPEWYKSALFNELYFINDGGTVWFESY------------DSSLG----------------------------- 441 (879)
T ss_pred cccccccchHHHHHhhhhheEEEecCcEEEEeee------------cCCcc-----------------------------
Confidence 9999999999999999999999999999999821 01110
Q ss_pred hhhccccccccCccccccccCCCCCcCceeeecccccccccccchhhHHHHHHhhhChHHHHHHHHHHHHHhhccCCCCc
Q 002202 504 LEQIYTPVALNSSFGTNLLQDGEENIGQFLYLEGIEYLMWNTYDVHFYSSFALIMLFPKIQLSIQRDFAAAVMMHDPSKM 583 (954)
Q Consensus 504 ~~~~~~~~~~~~~~~t~l~~~~~~~~Grf~~~EG~ey~~~nT~DV~fYas~al~~L~PeL~rs~l~~fa~~~~~~D~~~~ 583 (954)
.|++|.+++ | ++..+++|||+|+||+||+|||||||||||||||++|||+|+.++|++||+++..+|++++
T Consensus 442 ~eE~~~~~~------~---~~~~~~~GrFgYLEg~EYrM~NTYDVHFYaSfALl~LwPklElSiQ~DFa~av~~~d~~~~ 512 (879)
T KOG2119|consen 442 AEELHASHT------T---EDTEKEIGRFGYLEGWEYRMYNTYDVHFYASFALLMLWPKLELSIQRDFADAVLREDNTKR 512 (879)
T ss_pred hhhhccccc------c---ccchhhccceeeeeeeEEEEEEeeeeeeehhHHHHHhchhhhhHHHHHHHHHHHhhcCccc
Confidence 022222221 1 3557899999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccCCCCCCCCC--CCCCCccccccccccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 002202 584 KLLDDGQWVSRKVLGAVPHDIG--ICDPWFEVNAYCLYDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAY 661 (954)
Q Consensus 584 k~~~~G~~~~rk~~G~iPhdlG--~~~Pw~~~~~Y~~~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~ 661 (954)
|++++|++++||+.|.||||+| .++||.++|+|++||+..|||||+||||+|||+|..|||..||+.+||+|+++|++
T Consensus 513 k~l~~G~~~~rK~~~~VPHDlG~p~~dPW~~~NaY~iHdT~rWKDLN~KFVLqvYRD~~~tgd~~flk~~wpsv~~ime~ 592 (879)
T KOG2119|consen 513 KFLSEGEWMTRKVLGAVPHDLGDPDNDPWIETNAYNIHDTGRWKDLNLKFVLQVYRDYVATGDEKFLKAVWPSVYAIMEY 592 (879)
T ss_pred eeeecCcEEeeeecCcCCcccCCCCcCchhhhceeeeccccchhhcCceeEEEEEeeeEEeccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 58899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCCCccCCCCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC
Q 002202 662 MDQFDRDGDGMIENDGFPDQTYDTWSVSGISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS 740 (954)
Q Consensus 662 l~~~D~DgDGL~e~~G~~dqTyD~w~~~G~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~ 740 (954)
+++||+|+||||||.|++|||||.|.++|+||||++||+|||++|++||+++|+++.+..|+.+++++|+++++ ||||.
T Consensus 593 l~~fDKD~DGmIEN~GfpDQTYD~W~~tGvSAYCGgLWlAALqa~~amA~~~g~~~~~~~f~~klekak~~ye~kLWNGs 672 (879)
T KOG2119|consen 593 LEQFDKDNDGMIENEGFPDQTYDAWSMTGVSAYCGGLWLAALQAASAMARQIGDPNTQDYFNNKLEKAKDVYEKKLWNGS 672 (879)
T ss_pred HHhhcccCCcccccCCCCCccccceEEecchhhhhHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccC
Q 002202 741 YFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSR 820 (954)
Q Consensus 741 yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~ 820 (954)
||+||...+..+++||+|||+||||+.+|||+++++++++++||++||++||++|++|.+|++|||.|+|.+|.+++|++
T Consensus 673 YfnyD~s~s~~s~sImaDQlaGqWy~~a~gl~~i~~~~~vrsAL~tIy~~NVm~~~~G~~GAVNGm~p~G~VD~ssiQS~ 752 (879)
T KOG2119|consen 673 YFNYDESSSGSSSSIMADQLAGQWYARACGLPPIFPEEKVRSALDTIYDFNVMKFKGGRMGAVNGMLPSGKVDTSSIQSR 752 (879)
T ss_pred eeccccCCCCcchhhHHHhHhhHHHHHhcCCCccCchHHHHHHHHHHHhhceeeecCCceeccccccCCCccccccceeh
Confidence 99999987667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCCCCCCccCCccccHHHHHHHHHhCCCCC
Q 002202 821 EIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWAMQWALTRPKPK 900 (954)
Q Consensus 821 evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~Wa~~~Al~g~~~~ 900 (954)
|||+|++|++||.||++|+.++|++++.|+|+++|++.|+||+|||||+|+...+||+..||||+|||+||+||...+..
T Consensus 753 EvW~GvtYalAAtMIqeG~~e~~FqTA~G~y~~~w~~~glg~~FqTPEa~~~~~~yRsl~YMRPLsIWamQwaL~~~~~~ 832 (879)
T KOG2119|consen 753 EVWAGVTYALAATMIQEGLVEKGFQTASGIYEAIWSETGLGYAFQTPEAWYMEDEYRSLGYMRPLAIWAMQWALTKPQAK 832 (879)
T ss_pred hhhccHHHHHHHHHHHHhhHHhhhhhhhhhHHHHhhhcccceEEECchhhhcchhhhhhhhcchhHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987753
Q ss_pred CCCCeeeeeccCchhhhccccchhhhhccCCCcccCCcchhHHHHHHhhh
Q 002202 901 TLEKQMKPEVTDESLLRYHAGFSKVARLLKLPEEQGAKSLLQSLFDHTCR 950 (954)
Q Consensus 901 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 950 (954)
.. ...+..+..-+.++.+|+++++.++++...++|+.+|..|+.+|+
T Consensus 833 ~~---~~~e~~~~i~~~~~~~f~~~s~~~s~~~~~~~~~~~~~~~~~~~~ 879 (879)
T KOG2119|consen 833 PE---VVPELAPSISLQQGKGFGKVSRDLSLLPVSDHKSRLQTPYETTLR 879 (879)
T ss_pred CC---CCccccccchhhcCCCcccHHHhhcCCccchhhhhhccchhhccC
Confidence 32 111112333378899999999999999888999999999999875
No 2
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-122 Score=1027.48 Aligned_cols=680 Identities=31% Similarity=0.521 Sum_probs=592.8
Q ss_pred CCCcccccccccccceeeecCCcceEEEEEcCCCCCC--CcccCCCcEEEEEecCCeeeEeecCCCCCccccccccCCCC
Q 002202 91 LTSSHGVPLGGVGSGSIGRSYRGEFQRWQIFPRVCED--KPVLANQFSVFVSRSNGQKYSSVLCPKTPEVLKDTTAAGIG 168 (954)
Q Consensus 91 ~~~~~gvPLGGIG~GsI~~~~~G~f~~w~i~~~~~~~--~~~~~~qF~v~~~~~~~~~~~~VL~~~~~~~~~~~~~~gl~ 168 (954)
+++.+||||||||||+++++.++++..|+|+|...++ +..++|||++|...++.+ +.+|++..+ .+.+++
T Consensus 9 d~~~~GvPLGGiGtGk~eI~~~~ri~~~ti~nngGN~i~~~~~~~~F~vf~~~~dk~--~~~lqt~~~------~dg~l~ 80 (721)
T COG4354 9 DGPDHGVPLGGIGTGKLEIGRDVRIYFITIHNNGGNPIRKNRPACGFHVFEAPEDKK--AYILQTYPY------KDGSLP 80 (721)
T ss_pred CCcccCccccccccCceeecccceeEEEEEEcCCCChhhhhccccceeEEeeccccc--eEEEeccCC------ccCCCc
Confidence 5788999999999998888888888888888765444 456789999998774433 456765544 256889
Q ss_pred CCccCCCCCceeEEeecceeEEeeccCCCCCeEEEEEEecccccCCcccCCCceEEEEEEEEeCCCCeEEEEE-EEEecC
Q 002202 169 SWDWNLKGDKSTYHALYPRAWTVHEGEPDPELRIVCRQISPIIPHNYKESSYPVSVFTYTIYNSGKTSADITL-LFTWTN 247 (954)
Q Consensus 169 ~w~w~~~~~~~~y~alyP~aw~~y~~~~~~~v~v~~~~~SP~IP~d~k~SSlPvavf~~~v~N~~~~~~~vsi-~ft~~N 247 (954)
.|.|..+. ..+|+|+||++|.+|+ .. +++|+|+||||+||.|+|+|||||++|.|+|+|+++.++.+|| +.+|+|
T Consensus 81 ~~~~y~~~-~iey~g~yP~~~~~y~--n~-~~Ev~lEaFSpi~~~dvknSSlPva~f~~~v~~~~~~~itisfp~i~~~~ 156 (721)
T COG4354 81 KWQWYPKE-EIEYEGEYPVSWYVYK--NV-KVEVKLEAFSPIIPNDVKNSSLPVAVFSWRVKGPTEGPITISFPNIVGSN 156 (721)
T ss_pred cceeccCc-ceeEeeecceEEEEec--Cc-ceeEEeeeecccccCccccccCceEEEEEeecCCCCCceEEEeecccccc
Confidence 99998765 6999999999999996 23 7999999999999999999999999999999999999988888 888888
Q ss_pred CCCCCCcCCCcccccccccCCCeeEEEeeecCCCCCCc-----------eEEEEEEecCCCeEEEEeceeeecCCCcccc
Q 002202 248 SVGGDSEFTGQHYNSKTKMNDGVHAVLLHHRTSHQLPP-----------VTFALAAQETDGVHVSLCPHFVISGNSLGLT 316 (954)
Q Consensus 248 ~vG~~~~~~~~~~n~~~~~~~~v~Gv~l~~~~~~~~~~-----------~t~aiaa~~~~~v~vs~~~~f~~~~~~~~~~ 316 (954)
.+|+ +|+..+ .||++.+..+.+.+| +..||+.-..+-+.+-+..+|.+.|.+
T Consensus 157 ~vG~--------~~~~~k-----n~vV~k~e~~s~ydPr~g~s~l~~~~g~~cIt~~~~~~~~v~y~n~w~~~~~~---- 219 (721)
T COG4354 157 SVGR--------FNEAIK-----NGVVHKNEKASEYDPRYGESTLIEGEGSKCITQYNLKRKPVFYHNRWNPQGEG---- 219 (721)
T ss_pred ccch--------hhhhhc-----CCeeEecCcccccCcccccccccccccceehhhhccccccceeeccccccccc----
Confidence 8885 455432 367666655554444 345888755555667778889988876
Q ss_pred hHHHHHHHHhcCCCCCCCCccCCCCCCCCCceeEEEEEEEEecCCCeEEEEEEEEeecCcccccCCcceecccccccCCc
Q 002202 317 AKDMWHEIKEHGSFDRLNSMETSVTSEPGSSIGAAIAASVTVPPDSEGQVTFSLAWDCPEVNFMSGKTYYRRYTKFYGTH 396 (954)
Q Consensus 317 ~~~~W~~~~~~G~l~~~~~~~~~~~s~~g~~~~~ava~~~~l~pg~~~tv~F~LaW~~P~~~f~~g~~~~rrYt~ff~~~ 396 (954)
.|.|+.|..+|.+++.... ....+++.++++++. |+..+++|+||||||..+|. ..|.++|++||++
T Consensus 220 -~e~W~~f~~~~~~~d~~~~---~~~~~~e~lg~~i~~------~~~~ei~fv~aW~fp~~~~~--~~vghYYenFF~~- 286 (721)
T COG4354 220 -EEVWDKFARNEEVPDEPDE---VTGHRGEQLGIAISK------GEGEEITFVLAWYFPGTEFA--YPVGHYYENFFKD- 286 (721)
T ss_pred -ccHHHHhhcCCccCCCccc---ccCCCCCcceeEEec------cCCcceeEEEEEecCCcccc--cccchhhhhhhcc-
Confidence 8999999999998654321 133567788888877 89999999999999987764 4566678998887
Q ss_pred cchHHHHHHHHHHhhhhHHHHHHHhcccccccCCCCCcccccccchhhhhccCceeeecCCCCccccccccccccccccc
Q 002202 397 QNAAANIARDAILEHGSWELQIEAWQRPILEDKRLPEWYPITLFNELYYLNAGGAVWTDGSPPVHSLVTIGHRKFSLDWS 476 (954)
Q Consensus 397 ~~~a~~ia~~al~~~~~we~~i~~wq~pil~d~~lP~Wyk~alfNely~l~~Ggt~w~~~~~~~~~~~~~~~~~f~~~~~ 476 (954)
..+||+|||.|+..|+++|++||.||++.+.+|+|+|+|||||||.|++ +.|.+
T Consensus 287 ---s~eva~yaL~n~~~l~~ki~~~~~~i~n~~~~~~Wlkdal~n~lyiLts--~tWld--------------------- 340 (721)
T COG4354 287 ---SGEVAKYALKNFNTLRKKIEQWQDPILNVPELPDWLKDALFNSLYILTS--NTWLD--------------------- 340 (721)
T ss_pred ---HHHHHHHHHHhHHHHHHHhhhhcchhhcCcchHHHHHHHHHHHHHHHhh--ccccc---------------------
Confidence 5569999999999999999999999999999999999999999999876 44522
Q ss_pred cccccccccCCCCCchhHHHHHhhhhhhhhccccccccCccccccccCCCCCcCceeeecccccccccc--cchhhHHHH
Q 002202 477 QSDLKRIVDVPNQNDTAVNILERMSSILEQIYTPVALNSSFGTNLLQDGEENIGQFLYLEGIEYLMWNT--YDVHFYSSF 554 (954)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~~~~~~Grf~~~EG~ey~~~nT--~DV~fYas~ 554 (954)
++|||+.+||..|+++-. .||.+|+||
T Consensus 341 ---------------------------------------------------~~G~FaV~E~~~~~~y~~tig~~~~~Gsf 369 (721)
T COG4354 341 ---------------------------------------------------KDGRFAVYECPFYTWYESTIGDVRLYGSF 369 (721)
T ss_pred ---------------------------------------------------CCCceEEEecccccchhcccceeEecCCc
Confidence 469999999999999887 699999999
Q ss_pred HHhhhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCC-CCCCccccccccccCccccCCChHHHH
Q 002202 555 ALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGI-CDPWFEVNAYCLYDTARWKDLNPKFVL 633 (954)
Q Consensus 555 al~~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~-~~Pw~~~~~Y~~~D~~~W~Dl~~~fVl 633 (954)
+|++|||||++++++.|++++.++|++.+.|-+.=..++||.++.+|||+|. .++|..+++-.++|+.+|||++|.||+
T Consensus 370 gllllfPeLek~~~~~f~~~i~~eD~~~~v~gy~~~~~~~k~~~~tphDLg~~ehs~e~~iy~t~~d~~~wkDlgp~fVL 449 (721)
T COG4354 370 GLLLLFPELEKSVMRAFARAIPKEDTEYRVIGYAFPEAERKKDPATPHDLGPNEHSIEKPIYGTYQDPNLWKDLGPDFVL 449 (721)
T ss_pred hHHHHhHHHHHHHHHHHHHhccccCCceeeeeeccchhhccCCCCCCcccCccccchhcccccccCCchhhhhcCCcEEe
Confidence 9999999999999999999999999999888776566899999999999994 568877666666888899999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHc
Q 002202 634 QVYRDVVATGDKKFAKAVWPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDTWSVSGISAYSGGLWVAALQAASALAREV 713 (954)
Q Consensus 634 ~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~~D~DgDGL~e~~G~~dqTyD~w~~~G~say~~~lw~aAL~aaa~mA~~L 713 (954)
++||+++.|+|.+||+++||.++++|||++++|.|+||||++.|.+||+||+|.+.|.++||++||++||.||.+|++.|
T Consensus 450 lvYrdf~~T~D~eFL~e~y~~iv~~iD~~~~~d~d~DgiP~~~g~~d~~fDa~~i~G~ssy~~sl~iaal~A~l~is~~l 529 (721)
T COG4354 450 LVYRDFKFTNDREFLKEVYPVIVEAIDWLKRFDQDNDGIPENSGAMDNTFDATRIQGHSSYCGSLFIAALIAALEISKYL 529 (721)
T ss_pred eehhhhhhcccHHHHHHHHHHHHHHHHHHHhhcccCCCCCcccCCcccccccceeechhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCc-----------chHHHHHHHHHHHHHHHHH-hccCCeeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHH
Q 002202 714 GDR-----------GSEDYFLFKFQKAKVVYEK-LWNGSYFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKAR 781 (954)
Q Consensus 714 Gd~-----------~~A~~~~~~a~~~k~~~~~-lWnG~yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~ 781 (954)
++. -....|...++.+++.|++ ||||+||+.++. ..+++++++||+||||+.++|||+++|.++++
T Consensus 530 ~~~~~~~a~~e~~~~~~~~y~~~L~~~~e~~~~~LwNGkYy~lws~--~~~~s~lAsQL~Gqfy~~LLgLpdivdhd~~k 607 (721)
T COG4354 530 LDNAQLEALNEASKNYVDFYNTWLKEAREAFNKYLWNGKYYILWSN--SGNDSVLASQLCGQFYATLLGLPDIVDHDKIK 607 (721)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEecccc--cCchhhhHHHHHhHHHHHHcCCCcccchHHHH
Confidence 987 2446788999999999999 999999997643 24679999999999999999999999999999
Q ss_pred HHHHHHHHhccccccCCcceeecCcCCCCcccC-CCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCC
Q 002202 782 SALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDM-SSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGL 860 (954)
Q Consensus 782 saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~-~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~ 860 (954)
++|++|++.|+ ..+++|+.|+++|+|+|.+ .+.|+-+||||++|++|++|++.||.||++++.+.+++++.. .
T Consensus 608 sal~sIy~lnf---~~~~~~~~n~v~~dgsp~n~~svq~~s~W~gi~F~laa~m~~~Gm~de~~~~~e~~w~~l~~---n 681 (721)
T COG4354 608 SALESIYDLNF---NASEYCAANGVRPDGSPVNPLSVQPLSVWPGINFALAAHMIQMGMKDEGFELAENVWNQLKN---N 681 (721)
T ss_pred HHHHHHHhhcc---ccccccccCccCCCCCcCCcccccccccccchHHHHHHHHHHhcchhhhhHHHHHHHHHHHh---C
Confidence 99999999887 4678999999999999988 699999999999999999999999999999999999999966 6
Q ss_pred CcCCCCCccccCCC--CCCccCCccccHHHHHHHHHhCC
Q 002202 861 GYAFQTPEAWNTDD--QYRSLCYMRPLAIWAMQWALTRP 897 (954)
Q Consensus 861 G~~~~~PE~~~~~~--~~r~~~Y~r~~a~Wa~~~Al~g~ 897 (954)
||+||+||++++.+ ..|..||.|+||+|+++-++.|.
T Consensus 682 g~~fr~p~aInav~g~~~~l~~yv~~~s~W~l~~l~~g~ 720 (721)
T COG4354 682 GLQFRQPSAINAVGGETNRLSHYVGSPSIWALLFLLNGK 720 (721)
T ss_pred CcccCChhheeeccceeeehhhccCCchHHHHHHHhccc
Confidence 89999999999976 55899999999999999998875
No 3
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=100.00 E-value=5.9e-84 Score=728.28 Aligned_cols=360 Identities=54% Similarity=0.957 Sum_probs=132.1
Q ss_pred CceeeecccccccccccchhhHHHHHHhhhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCC--
Q 002202 530 GQFLYLEGIEYLMWNTYDVHFYSSFALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGIC-- 607 (954)
Q Consensus 530 Grf~~~EG~ey~~~nT~DV~fYas~al~~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~-- 607 (954)
|||.++||++|+|+||+|||||+|+||++|||+|+++++++|++++..+|++.++++++|++++||+.|.||||+|..
T Consensus 1 GrF~~~Eg~~~~~~~t~dv~~y~s~al~~lfP~Le~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~G~vphdlg~p~~ 80 (365)
T PF04685_consen 1 GRFAYLEGPEYPMYNTYDVHFYASFALLKLFPELERSMQRDFADAILSEDNTERKILYDGKIAPRKVRGAVPHDLGSPFD 80 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCccccccccccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCCCCCcc
Q 002202 608 DPWFEVNAYCLYDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDTWS 687 (954)
Q Consensus 608 ~Pw~~~~~Y~~~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~~D~DgDGL~e~~G~~dqTyD~w~ 687 (954)
+||..+|+|..+|...|+|+|++||+++||||++|||.+||+++||+|++||+|+.++|+|+||||++.|.+|||||.|.
T Consensus 81 ~P~~~~n~y~~~~~~~~~D~~~~fVL~vyr~~~~TGD~~fL~~~wp~v~~a~~~~~~~D~d~dGl~e~~g~~D~TyD~~~ 160 (365)
T PF04685_consen 81 DPWDRTNAYNYHDVYAWKDLNPKFVLQVYRDYKWTGDRDFLKEMWPAVKKAMDYLLSWDRDGDGLPENPGHPDQTYDDWS 160 (365)
T ss_dssp ------------------------------------------EHHHHHHHHHHHHHHSB--TTS-BEEET---SSSTT-E
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCCeee--EcCCCCCCCcccccccchhhH
Q 002202 688 VSGISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGSYFN--YDNSGSSQSSSIQADQLAGQW 764 (954)
Q Consensus 688 ~~G~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~yy~--~D~~~~~~~~si~adqL~Gqw 764 (954)
+.|+|+||++||++||+++++||+.||+++.+++|++.++++|++|++ ||||+||+ +|.. ...+++|++|||+|||
T Consensus 161 ~~G~say~~~L~laAL~A~~emA~~lgd~~~a~~y~~~~~~~~~~~~~~LWnGeyy~~~~d~~-~~~~~~~~aDQl~Gqw 239 (365)
T PF04685_consen 161 MYGPSAYCGGLWLAALRAAAEMAKILGDPELAAKYRELAEKAKKAFNKKLWNGEYYRQWYDSK-YQNGDGCMADQLCGQW 239 (365)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHSEETTEE--EE----TTS-EES-TT-SS--E
T ss_pred eeCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHhhCHhheeeeeccC-CCCCCeEEeChhhHHH
Confidence 999999999999999999999999999999999999999999999999 99999999 7833 2357899999999999
Q ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChHHHH
Q 002202 765 YARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLADIGF 844 (954)
Q Consensus 765 ~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~ 844 (954)
|+.+|||++|+|+||++++|++|+++|++.+.++++|++||++|+|.++.++.|+.|||||++|.+|++||++||.+||+
T Consensus 240 ~a~~~gl~~v~~~e~v~sAL~sI~~~N~~~~~~~~~G~~n~~~p~g~~~~~~~q~~evW~G~~y~~Aa~mi~~G~~~e~~ 319 (365)
T PF04685_consen 240 WARLLGLGDVLDEEKVKSALRSIYEYNVKYFLGGEMGAVNGVWPDGKPDTSSPQSNEVWTGVEYAVAAHMIQEGMVEEGL 319 (365)
T ss_dssp EHHHHHHTT-S-HHHHHHHHHHHHHHHEE-S-BTTTBGGGGS-T------------------------------------
T ss_pred HHHHcCCcCCCCHHHHHHHHHHHHHhcCeEccCCCCcEEEeeeccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcCCCCCccccCCCCCCccCCccccHHHHHHH
Q 002202 845 QTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWAMQW 892 (954)
Q Consensus 845 ~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~Wa~~~ 892 (954)
+++++++++++.+ .|++|++||+|+++++||++|||||||||+|+|
T Consensus 320 ~~~~~~~~~~~~~--~g~~f~~pE~~~~~~~~r~~~Y~R~ls~W~~~~ 365 (365)
T PF04685_consen 320 EIAKGIYDRYYGR--KGNPFNTPEAINADGNYRGSHYMRPLSIWSMQW 365 (365)
T ss_dssp ------------------------------------------------
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccCC
Confidence 9999999999866 789999999999999999999999999999986
No 4
>PF12215 GBA2_N: beta-Glucocerebrosidase 2 N terminal; InterPro: IPR024462 This entry represents a domain found in beta-glucosidase 2 (also known as beta-glucocerebrosidase 2, acid beta-glucosidase, D-glucosyl-N-acylsphingosine glucohydrolase, or GCase), which is typically between 320 to 354 amino acids in length. It is found just after the extreme N terminus. This protein is located in the ER. The N-terminal is thought to be the luminal domain while the C-terminal is the cytosolic domain []. The catalytic domain of GBA-2 is unknown.
Probab=100.00 E-value=8.7e-67 Score=577.16 Aligned_cols=291 Identities=43% Similarity=0.834 Sum_probs=254.8
Q ss_pred cccccccccceeeecCCcceEEEEEcCCCCCCCcccCCCcEEEEEecCCeeeEeecCCCCCccccccccCCCCCCccCCC
Q 002202 96 GVPLGGVGSGSIGRSYRGEFQRWQIFPRVCEDKPVLANQFSVFVSRSNGQKYSSVLCPKTPEVLKDTTAAGIGSWDWNLK 175 (954)
Q Consensus 96 gvPLGGIG~GsI~~~~~G~f~~w~i~~~~~~~~~~~~~qF~v~~~~~~~~~~~~VL~~~~~~~~~~~~~~gl~~w~w~~~ 175 (954)
||||||||||||+|++||+||||||+|.+..+.. ||+|++++++++..++||....++. .+|++|+| ++
T Consensus 1 G~PlGGiG~G~i~~~~~G~f~~w~i~n~p~~~~~----~F~v~~~~~~~~~~~~~l~~~~~~~------~~l~~w~~-~~ 69 (299)
T PF12215_consen 1 GVPLGGIGAGSIGRGGRGDFCRWQIFNNPGKYSY----QFAVFIRRKGGEPFARVLSGSPPPP------GGLSSWNW-LP 69 (299)
T ss_pred CCcccccccceEeEcCCccEEEEEEeccCCCcce----eeEEEEEeCCCceEEEEccCCCCCc------cccccccc-cc
Confidence 8999999999999999999999999877655333 9999999988878899998776532 37899999 87
Q ss_pred CCceeEEeecceeEEeeccCCCCCeEEEEEEecccccCCcccCCCceEEEEEEEEeCCCCeEEEEEEEEecCCCCCCCcC
Q 002202 176 GDKSTYHALYPRAWTVHEGEPDPELRIVCRQISPIIPHNYKESSYPVSVFTYTIYNSGKTSADITLLFTWTNSVGGDSEF 255 (954)
Q Consensus 176 ~~~~~y~alyP~aw~~y~~~~~~~v~v~~~~~SP~IP~d~k~SSlPvavf~~~v~N~~~~~~~vsi~ft~~N~vG~~~~~ 255 (954)
+++|+|||||||++|+ + +++|+|+|||||||||||||||||||+||+|+|+|+++++++|||+|||+|++|.....
T Consensus 70 --~~~y~~lyP~a~~~y~-~-~~~v~v~~~~~SP~IP~d~k~SSlP~~vf~~~v~N~~~~~~~vsi~~s~~N~vG~~~~~ 145 (299)
T PF12215_consen 70 --DAEYHGLYPRAWTEYE-D-DFPVKVTCEQFSPFIPHDYKDSSLPVAVFEWTVENTSDEPVEVSIAFSWPNGVGWDGNG 145 (299)
T ss_pred --ceEEEEECceEEEEEe-c-CCCcEEEEEEECCccCCChhhcCCCeEEEEEEEEcCCCCcEEEEEEEEeeCCcCccccc
Confidence 8999999999999999 6 99999999999999999999999999999999999999999999999999999965332
Q ss_pred CCc----cccc-ccccCCCeeEEEeeecCCCCC--CceEEEEEEecCCCeEEEEeceeeecCCCcccchHHHHHHHHhcC
Q 002202 256 TGQ----HYNS-KTKMNDGVHAVLLHHRTSHQL--PPVTFALAAQETDGVHVSLCPHFVISGNSLGLTAKDMWHEIKEHG 328 (954)
Q Consensus 256 ~~~----~~n~-~~~~~~~v~Gv~l~~~~~~~~--~~~t~aiaa~~~~~v~vs~~~~f~~~~~~~~~~~~~~W~~~~~~G 328 (954)
..+ +.|. ...+.++++||+|++...... .+++|||||.+.++++|++|++|+++++ .+++|++|+++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~~g~~aia~~~~~~~~vs~~~~~~~~~~-----~~~~W~~~~~~G 220 (299)
T PF12215_consen 146 RKNESGGFQNDGNYRSSGGVNGVLLTNEKSPDIDPMNGTFAIAADEPPGVEVSVCPSFDPGGD-----GSDLWDDFKEDG 220 (299)
T ss_pred CcCcccccccCCcccccCceEEEEEecCCCCCCCCCCcEEEEEEeCCCCeEEEEcccccCCCC-----HHHHHHHHHhcC
Confidence 222 1221 123456799999999776543 4689999999999999999999998774 489999999999
Q ss_pred CCCCCCCccCCCCCCCCCceeEEEEEEEEecCCCeEEEEEEEEeecCcccccCCccee-cccccccCCccchHHHHHHHH
Q 002202 329 SFDRLNSMETSVTSEPGSSIGAAIAASVTVPPDSEGQVTFSLAWDCPEVNFMSGKTYY-RRYTKFYGTHQNAAANIARDA 407 (954)
Q Consensus 329 ~l~~~~~~~~~~~s~~g~~~~~ava~~~~l~pg~~~tv~F~LaW~~P~~~f~~g~~~~-rrYt~ff~~~~~~a~~ia~~a 407 (954)
+|+. ++.+++.+++|||++++|+||++++|+|+|+||||++.|..+..++ |||||||++.+++|++||+||
T Consensus 221 ~l~~--------~~~~~~~~~~ava~~~~l~pg~~~~v~F~laW~~P~~~f~~~~~~~~r~Yt~ff~~~~~~a~~va~ya 292 (299)
T PF12215_consen 221 RLPS--------PSSAGEGLAGAVAVKFTLAPGESKTVRFALAWDFPNVYFGKGKKYYGRRYTNFFGTRGDNAWEVAEYA 292 (299)
T ss_pred CCCC--------CCCCCCcceEEEEEEEEECCCCeEEEEEEEEEeCChheccCCCeeeCccccccCCCCcccHHHHHHHH
Confidence 9941 4567888999999999999999999999999999999999877666 999999999999999999999
Q ss_pred HHhhhhH
Q 002202 408 ILEHGSW 414 (954)
Q Consensus 408 l~~~~~w 414 (954)
|+||++|
T Consensus 293 l~n~~~w 299 (299)
T PF12215_consen 293 LSNYPRW 299 (299)
T ss_pred HhhhhcC
Confidence 9999976
No 5
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=99.97 E-value=4e-29 Score=284.49 Aligned_cols=302 Identities=23% Similarity=0.347 Sum_probs=226.1
Q ss_pred ccccccc--chhhHHH--HHHhhhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccc
Q 002202 540 YLMWNTY--DVHFYSS--FALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNA 615 (954)
Q Consensus 540 y~~~nT~--DV~fYas--~al~~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~ 615 (954)
||||+|. |.. .+. +.|....++.++++|..|+..+. .|.|||.+... +.+.
T Consensus 25 ~PWF~~~GRDt~-Isl~gl~l~~~~~~~a~~~L~~~~~~~~--------------------~G~ipn~~~~~----~~~~ 79 (370)
T PF06202_consen 25 YPWFSTWGRDTF-ISLPGLLLSPGRFEEARNILATFAGTQR--------------------HGLIPNELRDG----EEPR 79 (370)
T ss_pred CccccccccHHH-HHHHHHHhCCCcHHHHHHHHHHHHHhhh--------------------cCcccCcccCC----CCCC
Confidence 8888887 865 442 33444678999999999998752 58899988542 3578
Q ss_pred cccccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhh-----CCC-CCCCccCCC-CCCCCC-C---
Q 002202 616 YCLYDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQF-----DRD-GDGMIENDG-FPDQTY-D--- 684 (954)
Q Consensus 616 Y~~~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~~-----D~D-gDGL~e~~G-~~dqTy-D--- 684 (954)
|+++|+++| ||+++++|+++|||.+||+++||.++++|+++.+. +.| +|||+..+. ...+|| |
T Consensus 80 Y~s~Dat~w------fl~~l~~Y~~~t~D~~~l~~~~~~i~~il~~~~~g~~~~~~~d~~~gl~~~~~~~~~~tWmD~~~ 153 (370)
T PF06202_consen 80 YNSVDATLW------FLIALQEYYRWTGDYSFLRELYPAIEEILEWYADGTDFGIRVDPEDGLIYSGNGLNNQTWMDARN 153 (370)
T ss_pred CCCCccHHH------HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCeeecCCCCCCCCcccccc
Confidence 999988888 99999999999999999999999999999997532 234 689998532 224454 3
Q ss_pred -Ccccc---chhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC--eee--EcCCCCCCCccc
Q 002202 685 -TWSVS---GISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS--YFN--YDNSGSSQSSSI 755 (954)
Q Consensus 685 -~w~~~---G~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~--yy~--~D~~~~~~~~si 755 (954)
++.++ |..+.+|+|||+||+.+++||+..+++ .+++|+++++++|++|++ ||+.+ ||. +|..+. .+.+|
T Consensus 154 ~g~~~tpr~g~~vEIqal~y~AL~~~~~la~~~~~~-~a~~~~~~A~~lk~~F~~~FW~~~~g~~~d~ld~~~~-~d~~i 231 (370)
T PF06202_consen 154 DGRPVTPRDGAAVEIQALWYNALRFAAELAEKFGDE-LAARYREWAERLKESFEKRFWDEDRGYYADALDGDKE-PDDSI 231 (370)
T ss_pred CCccccCCCCcchHHHHHHHHHHHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEecCCCC-CCccc
Confidence 33333 456789999999999999999988877 789999999999999999 99854 554 344332 46689
Q ss_pred ccccchhhHHHHHhCCC-CCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCC--------Cccc--CCCCccCCccc
Q 002202 756 QADQLAGQWYARACGLL-PIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPD--------GRVD--MSSMQSREIWS 824 (954)
Q Consensus 756 ~adqL~Gqw~a~~~GL~-~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~--------G~~~--~~s~~s~evW~ 824 (954)
++||+. ++.|+ +++++++++++|+.+.+.++++ +|+++....+ |..+ ..+||+|+|||
T Consensus 232 rpN~~~------a~~L~~~~l~~~~a~~vl~~~~~~L~tp-----~GlRTLs~~~~~Y~p~y~g~~~~rd~sYHnGsvWp 300 (370)
T PF06202_consen 232 RPNQLI------ALSLPPGLLDPEQAKKVLDRVEEELLTP-----WGLRTLSPSDPRYNPIYEGDQDSRDMSYHNGSVWP 300 (370)
T ss_pred ccCchh------HHhcCCccCCHHHHHHHHHHHHHHcCCC-----CchhcccCCCCCcCCCCCCccccCcccccCCCcCc
Confidence 999875 23343 5899999999999987777754 5665543221 2111 14899999999
Q ss_pred hHHHHHHHHHHHcCCh-HHHHHHHHHHHH----HHhcCCCCCcCCCCCccccCCCCCCccCCcc--ccHHHHHHHH
Q 002202 825 GVTYAVAASMIHEDLA-DIGFQTACGIYE----AAWSGTGLGYAFQTPEAWNTDDQYRSLCYMR--PLAIWAMQWA 893 (954)
Q Consensus 825 g~~y~lAa~mi~~G~~-eeA~~l~~~i~~----~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r--~~a~Wa~~~A 893 (954)
+++...+.++++.|.. +++.+.++.+++ +. .+.+ ..++||+||+++ ++|++ +.++||+-.-
T Consensus 301 w~~g~~~~al~r~g~~~~~~~~~~~~ll~~~~~~~-~~~~---~~~lpEl~dg~~----~~~p~gc~~QAWS~a~i 368 (370)
T PF06202_consen 301 WDNGIYAEALLRYGFDEEEAIREAKSLLEGFEEHL-QEFG---LGRLPELFDGDP----PHYPRGCSPQAWSVAEI 368 (370)
T ss_pred CcHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHH-hhcc---CCCcchhcCCCC----CCCCCCCHHHHHHHHHh
Confidence 9999999999999984 566665555444 54 3333 459999999885 45554 8999997543
No 6
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.7e-25 Score=267.79 Aligned_cols=309 Identities=22% Similarity=0.319 Sum_probs=233.5
Q ss_pred ccccccc--chhhHHHHHHhhh-ChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCcccccc
Q 002202 540 YLMWNTY--DVHFYSSFALIML-FPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAY 616 (954)
Q Consensus 540 y~~~nT~--DV~fYas~al~~L-~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y 616 (954)
+|||.+. |..+-+ .+|+++ .||+||++++.|+++. + .|.|||.+....|. .++|
T Consensus 279 ~~WF~~fGRD~lIS~-lgll~~g~~elArg~L~~~a~~~---~-----------------~GkIPhe~~~~~~~--~~~Y 335 (641)
T COG3408 279 AHWFSPFGRDTLISA-LGLLLVGRFELARGTLNTLARYS---E-----------------PGKIPHEILLSIPG--EPYY 335 (641)
T ss_pred chhccccchHHHHHH-HHHHhcCCHHHHHHHHHHHHhhc---c-----------------CCCCcchhhhcCCC--ccee
Confidence 3588543 988666 888888 9999999999999872 1 68999998443222 4789
Q ss_pred ccccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-----hCCCCCCCccCCCCCCCC-CC----Cc
Q 002202 617 CLYDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ-----FDRDGDGMIENDGFPDQT-YD----TW 686 (954)
Q Consensus 617 ~~~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~-----~D~DgDGL~e~~G~~dqT-yD----~w 686 (954)
++.|+.+| ||+++.+|+++|+|.+|++++||.+..+++|+.+ ++.++||+++. ...+| .| .|
T Consensus 336 ~tvD~t~~------~i~~~~~y~~~t~d~~~i~e~~~~v~~a~d~~~~~~~~~~~~~~~~l~~~--~~~~tW~Ds~~~~~ 407 (641)
T COG3408 336 NTVDATPL------FIYLLGAYLKYTGDTEFIRELWPSVGAALDWILKGFDFGFDTYGDGLLEG--GSNQTWMDSGDDIF 407 (641)
T ss_pred ccCCCcHH------HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcCCccceecCcccccC--CCCCCCeecCCccc
Confidence 99987777 9999999999999999999999999999999743 45788999983 33444 34 34
Q ss_pred ccc---chhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccC-CeeeEcCCCCCCCcccccccch
Q 002202 687 SVS---GISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNG-SYFNYDNSGSSQSSSIQADQLA 761 (954)
Q Consensus 687 ~~~---G~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG-~yy~~D~~~~~~~~si~adqL~ 761 (954)
.+. |...-++++|+.+++++..+|.++++.+.++++.+.+++++++|++ ||++ .||..-..+ .+..|.++++.
T Consensus 408 ~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~~~~~~~~~~~~a~~l~~~F~~~fw~~~~f~dl~~~~--~~~~~r~~~~~ 485 (641)
T COG3408 408 AVTPRAGKPVAINALQYYALKAALRLANLLGDEEDAARLEKIARRLKESFEAKFWNPTGFYDLALDD--KDVPIRPNFSN 485 (641)
T ss_pred cccCCCCCceeHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHhhCccchHhhhccC--CCcccCcccee
Confidence 443 4577789999999999999999999888899999999999999999 9997 576531111 12234443332
Q ss_pred hhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChH
Q 002202 762 GQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLAD 841 (954)
Q Consensus 762 Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~e 841 (954)
+- .+..+| +++++++ .+++.+.+.++++ +|+.+.+.-+-.-+..+||+|+|||+++.+++.++.+.|..+
T Consensus 486 a~-~l~~~g---i~~~~~~-~~~~l~e~~lltp-----~GlRTLS~~dp~Y~p~yYH~GtVWP~~~gifv~g~~r~G~~~ 555 (641)
T COG3408 486 AI-HLLYTG---IVDPERA-VIIRLAEEDLLTP-----WGLRTLSPDDPRYNPMYYHNGTVWPHDTGIFVLGLRRYGLKD 555 (641)
T ss_pred cc-cccccc---cCchHHH-HHHHHHHHhccCC-----ccccccCCCCCCcCCCcccCCCcccchHHHHHHHHHHcCccc
Confidence 11 122344 6777777 5666555566543 788776533323333468999999999999999999999988
Q ss_pred -HHHHHHHHHHHHHhcCCCCCcCCCCCccccCCCCC--CccCCccccHHHH-------HHHHHhCCCCCCC
Q 002202 842 -IGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQY--RSLCYMRPLAIWA-------MQWALTRPKPKTL 902 (954)
Q Consensus 842 -eA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~--r~~~Y~r~~a~Wa-------~~~Al~g~~~~a~ 902 (954)
++++++++++..+ . .++.||.||+..+. +++ .+|+|| +++.++|+++++.
T Consensus 556 ~~~~~~~~~~~~~a-~------~~~~pE~f~g~~~~~P~gc----~~QAWS~a~~l~~~~~~~lg~~p~~~ 615 (641)
T COG3408 556 IQALELFDGLFSSA-S------PGRIPELFDGDSPNRPKGC----YPQAWSSAEILRSLLQGLLGIKPDGF 615 (641)
T ss_pred HHHHHHHHHHhhhc-c------cCCCcccccccCCCCCCCc----chhhhhHHHHHHHHHHHHhCCCcCcc
Confidence 9999999998877 3 34779999998544 233 677787 6778999999887
No 7
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=99.90 E-value=2.3e-22 Score=237.95 Aligned_cols=243 Identities=18% Similarity=0.191 Sum_probs=184.9
Q ss_pred ccccccc--chhhHHHHHHh--hhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccc
Q 002202 540 YLMWNTY--DVHFYSSFALI--MLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNA 615 (954)
Q Consensus 540 y~~~nT~--DV~fYas~al~--~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~ 615 (954)
|||+.+. |.. .+.-+|+ --.++.++.+|+.|++.+. .|.||+.+.+.. ..++
T Consensus 288 ypwF~~WGRDt~-Isl~Gl~l~tgr~~~A~~iL~~fa~~~~--------------------~GliPN~~~~~g---~~p~ 343 (575)
T TIGR01561 288 YHWFDDWGRDSF-ISLEGLLLIDKQFDEAKEAILKFANLCK--------------------RGLIPNNFIAFG---GDPI 343 (575)
T ss_pred CchhccchhHHH-HHHHHHHhcCCcHHHHHHHHHHHHHHhH--------------------CCCCCCccCCCC---CCcc
Confidence 7887776 754 3333343 3579999999999999861 588999764421 2468
Q ss_pred cccccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhh-----CCCCCCCccCCCCCCCCCCC----c
Q 002202 616 YCLYDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQF-----DRDGDGMIENDGFPDQTYDT----W 686 (954)
Q Consensus 616 Y~~~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~~-----D~DgDGL~e~~G~~dqTyD~----w 686 (954)
|+++|+++| ||+++++|+++|||.++++++||.++.+|++.... ..|.|||+.. |.+..++|. |
T Consensus 344 YntvDAtLW------fi~al~~Y~~~tgD~~~l~~l~p~l~~ii~~y~~G~~~~i~~d~dGLi~~-g~~lTWMDa~~g~~ 416 (575)
T TIGR01561 344 YNGVDASLW------AIHAIDKTFAYSQDFLFIRDVVDKVLDIIDNYCAGNDFAIGMDNDLIFHK-GAPLTWMDAKVDER 416 (575)
T ss_pred CCCchHHHH------HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCcEEEECCCccEeC-CCCCCCCCCCCCCc
Confidence 999999888 99999999999999999999999999999975332 1346788863 444445663 3
Q ss_pred c---ccchhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC-eeeEcCC---CC---CCCccc
Q 002202 687 S---VSGISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS-YFNYDNS---GS---SQSSSI 755 (954)
Q Consensus 687 ~---~~G~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~-yy~~D~~---~~---~~~~si 755 (954)
. ..|..+++|+|||+||+.+++||+.+|++ +..|+++|+++|++|++ ||+++ -|.||.. +. ..+.++
T Consensus 417 ~~tPR~G~~VEInALwYnAL~~~a~la~~~g~~--a~~y~~~A~~lk~~F~~~FW~~~~g~l~D~v~~d~~~~~~~d~s~ 494 (575)
T TIGR01561 417 AVTPRAGAACEINALWYNALKTAEFLGNELGED--AESLEEKAAGVAKNFAEKFINPDGNCLFDLIHQDEAGNQVKDKAI 494 (575)
T ss_pred cCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcc--HHHHHHHHHHHHHHHHHhcCCCCCCeeEEEEecCCCCCccccccc
Confidence 3 45789999999999999999999999975 57899999999999999 99865 2444422 11 136789
Q ss_pred ccccchhhHHHHHhCCC-CCCCHH-HHHHHHHHHHHhccccccCCcceeecCcCCC--------Cccc--CCCCccCCcc
Q 002202 756 QADQLAGQWYARACGLL-PIVDED-KARSALKKVYNYNVLKVMGGKRGAVNGMLPD--------GRVD--MSSMQSREIW 823 (954)
Q Consensus 756 ~adqL~Gqw~a~~~GL~-~ild~e-~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~--------G~~~--~~s~~s~evW 823 (954)
+++|++ ++.|+ ++++++ +++++++.+.+.++++ +|++.....+ |..+ ..+||+|+||
T Consensus 495 RPNql~------A~sL~~~ll~~~~~~~~vl~~v~~~Lltp-----~GlRTLsp~d~~Y~p~Y~g~~~~Rd~aYHqGtvW 563 (575)
T TIGR01561 495 RPNQIF------AISLPFPIIDDESIAKAILDLIEKDLLRP-----FGLKSLSRDDPLYKGQYKGDALSRDTAYHNGSLP 563 (575)
T ss_pred CCCcee------HhhCCCCCCCHHHHHHHHHHHHHhhccCC-----cccccCCCCCCCcCCCCCCCccccCCcCcCCCcC
Confidence 999987 45565 589999 9999999999899875 5766554322 2221 2489999999
Q ss_pred chH
Q 002202 824 SGV 826 (954)
Q Consensus 824 ~g~ 826 (954)
|+.
T Consensus 564 pwl 566 (575)
T TIGR01561 564 PWL 566 (575)
T ss_pred ccc
Confidence 987
No 8
>PRK10137 alpha-glucosidase; Provisional
Probab=99.88 E-value=6.2e-21 Score=229.89 Aligned_cols=300 Identities=15% Similarity=0.171 Sum_probs=210.1
Q ss_pred cchhhHHHHHHhhhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCcccc
Q 002202 546 YDVHFYSSFALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWK 625 (954)
Q Consensus 546 ~DV~fYas~al~~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~ 625 (954)
.|.+|-| ++++++.|+++++.++.+++.|.+.|+..+ -...|+|||.+-...+ +.. ..+...|.
T Consensus 350 WDS~~~A-~~la~fdpelA~~~lr~Lf~~Q~~~~d~~r----------~~~~G~Iph~vf~~~~----p~R-~g~~~~~n 413 (786)
T PRK10137 350 WDTWKQA-YAMAHFNPDVAKENIRAVFSWQIQPDDSVR----------PQDVGFVPDLIAYNLS----PER-GGDGGNWN 413 (786)
T ss_pred hHHHHHH-HHHhhcCHHHHHHHHHHHHHhhccccCCCC----------cCCCCeeeEEeccCCC----ccc-cccccccc
Confidence 5999887 999999999999999999999865543211 1237889997732100 000 00001222
Q ss_pred CC---ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hhCCCCCCCccCCCC-----------------------
Q 002202 626 DL---NPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMD-QFDRDGDGMIENDGF----------------------- 678 (954)
Q Consensus 626 Dl---~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~-~~D~DgDGL~e~~G~----------------------- 678 (954)
.. .|.+.++|+++|++|+|.+||++|||++.++.+|+. ..|+|+|||+|+...
T Consensus 414 e~~tqPPL~a~av~~vy~~t~d~~fl~~lyPkL~a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~g~~~~~i~~~~~~~ 493 (786)
T PRK10137 414 ERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEE 493 (786)
T ss_pred CCCcCcCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCCCCceeEeeccccccccccccccccccccccccc
Confidence 11 378999999999999999999999999999999974 599999999995211
Q ss_pred -----CC--------------------C----CCC------------------------Cccc--------cc-------
Q 002202 679 -----PD--------------------Q----TYD------------------------TWSV--------SG------- 690 (954)
Q Consensus 679 -----~d--------------------q----TyD------------------------~w~~--------~G------- 690 (954)
.+ + ++| .|.+ .|
T Consensus 494 ~~~G~~n~~~~~~~~~~~~~~~~~~~~~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~~~~~~dg~l~~~p~ 573 (786)
T PRK10137 494 TQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSL 573 (786)
T ss_pred cccccccccccccccccccccccccccCCCCCCCCCccccccccccccchhhhccccccceeeeehhcccCCCCccCCCC
Confidence 00 1 123 1111 01
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC---eeeEcCCCCC-----CCccccc-c
Q 002202 691 --ISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS---YFNYDNSGSS-----QSSSIQA-D 758 (954)
Q Consensus 691 --~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~---yy~~D~~~~~-----~~~si~a-d 758 (954)
.++-++++.|.+.+.+++||+.||+++.|++|++.|+++++.|++ +||++ ||.+|..... ..+.|.. .
T Consensus 574 ~~e~VDLNsyLy~a~~~LA~LAe~LG~~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~~~~~~~~~g~~i~~~~ 653 (786)
T PRK10137 574 LQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDETTGFYYDVRIEDKPLANGCAGKPIVERG 653 (786)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEEecCcccccccccCcceeeec
Confidence 145579999999999999999999999999999999999999999 99864 4457654211 1111110 0
Q ss_pred cchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCCC-cccCCCCccCCccchHHHHHHHHHHHc
Q 002202 759 QLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPDG-RVDMSSMQSREIWSGVTYAVAASMIHE 837 (954)
Q Consensus 759 qL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G-~~~~~s~~s~evW~g~~y~lAa~mi~~ 837 (954)
.-.+.|+++++| ++++++++++++.+..... ..+.+|++... +++ ..+...|..|.||+.++|.++.+|.++
T Consensus 654 ~~~agf~PLwaG---ia~~eqA~~VV~~L~~p~~---F~t~~GipTlS-~s~p~ydp~~YWRGpVWpp~N~Li~~GL~rY 726 (786)
T PRK10137 654 KGPEGWSPLFNG---AATQANADAVVKVMLDPKE---FNTFVPLGTAA-LTNPAFGADIYWRGRVWVDQFYFGLKGMERY 726 (786)
T ss_pred cCccchhhccCC---CCCHHHHHHHHHHhcChhh---cCCCCCccCcC-CCccccCCCCCCCCCcCHhHHHHHHHHHHHc
Confidence 013456788888 6789999988887664332 23334554432 222 223347899999999999999999999
Q ss_pred CChHHHHHHHHHHHHHH--hcCCCCCcCCCCCccccCC
Q 002202 838 DLADIGFQTACGIYEAA--WSGTGLGYAFQTPEAWNTD 873 (954)
Q Consensus 838 G~~eeA~~l~~~i~~~~--~~~~g~G~~~~~PE~~~~~ 873 (954)
|..++|.++++.+++++ +.+.| -.-|-|+..
T Consensus 727 G~~e~A~~La~~ll~~a~~l~~tG-----~~~E~YDp~ 759 (786)
T PRK10137 727 GYRDDALKLADTFFRHAKGLTADG-----PIQENYNPL 759 (786)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC-----ceEEeECCC
Confidence 99999999999998854 33432 344777763
No 9
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.86 E-value=4.7e-17 Score=197.48 Aligned_cols=282 Identities=17% Similarity=0.192 Sum_probs=194.7
Q ss_pred chhhHHHHHHhhh-ChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCcccc
Q 002202 547 DVHFYSSFALIML-FPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWK 625 (954)
Q Consensus 547 DV~fYas~al~~L-~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~ 625 (954)
|-.+-+ .||+.+ .|+.++..++.+++.|. .|+...+.. .+.| ...||. +..+ .
T Consensus 299 D~~~~a-~Al~~~G~~~~a~~~l~~l~~~q~-~~G~~~~~~--------~~dG-------~~~~~~----~~~Q-----~ 352 (616)
T TIGR01577 299 DASYIA-TALDRAGYHDRVDRFFRWAMQTQS-RDGSWQQRY--------YLNG-------RLAPLQ----WGLQ-----I 352 (616)
T ss_pred cHHHHH-HHHHHCCCHHHHHHHHHHHHHhhC-cCCCcceEE--------ecCC-------CCCCCC----CCcc-----c
Confidence 766444 899887 99999999999888873 333211100 0111 111211 0122 3
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hCCCCCCCccCCCCCCCCCCCccc-cchhHHHHHHHHHHH
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ-FDRDGDGMIENDGFPDQTYDTWSV-SGISAYSGGLWVAAL 703 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~-~D~DgDGL~e~~G~~dqTyD~w~~-~G~say~~~lw~aAL 703 (954)
|.....++++++|++.|+|.+|++++||+|+++++|+.+ +++ +++. ...|.|+. .|.++|+.+++|+||
T Consensus 353 D~~g~~l~al~~y~~~t~d~~~~~~~~~~v~~a~~fl~~~~~~---~l~~------~~~~lWEer~G~~~~t~a~~~aAL 423 (616)
T TIGR01577 353 DETGSILWAMDQHYRLTNDRAFLEEIWESVQKAAQYLILFIDP---ETPL------PCRDLWEEREGVFTYTASAVYGGL 423 (616)
T ss_pred cchhHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhccC---CCCC------CCCccceecCCccCccHHHHHHHH
Confidence 556667889999999999999999999999999999866 443 3443 34567875 588999999999999
Q ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccC--Ceee--EcCCCCCCCcccccccchhhHHHHHhCCCCCCCHH
Q 002202 704 QAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNG--SYFN--YDNSGSSQSSSIQADQLAGQWYARACGLLPIVDED 778 (954)
Q Consensus 704 ~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG--~yy~--~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e 778 (954)
++|++||+.+|+++.+++|++.++++++.|++ +|++ ++|. ++... .+..+.++ +++ .+.-+|+-+ .++.
T Consensus 424 ~~aa~lA~~lGd~~~a~~~~~~Ad~ik~~i~~~~w~~~~g~F~~~~~~~~--~~~~vDaS-lL~--l~~~~g~l~-~~Dp 497 (616)
T TIGR01577 424 DAAAAVADKLGEKRLAQNWKKAAEFIKRAVEERFWLPERQVFAKGIKLMV--LDKTIDIS-ILG--ISVPFNLIA-PDDE 497 (616)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeecCCC--CCCcccHH-HHh--HHHhcCCCC-CCCh
Confidence 99999999999998899999999999999999 9975 3664 34221 12223322 221 112256433 3456
Q ss_pred HHHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChH-------------HHHH
Q 002202 779 KARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLAD-------------IGFQ 845 (954)
Q Consensus 779 ~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~e-------------eA~~ 845 (954)
++.++++.|.+.+.++..+| + -- ++. ..|+.+++|+..|+++|..+++.|..+ +|.+
T Consensus 498 r~v~Tv~~I~~~L~~~~~gg---i-~R-Y~~-----D~y~~g~~w~i~T~wla~~~~~~g~~~~~~~~~~~~~~~~~A~~ 567 (616)
T TIGR01577 498 RMVKMAEAIEKHLTSPIVGG---I-KR-YEN-----DPYVGGNPWILTTLWLSQLYIKQGRILKALNHNGADIYLQKSKK 567 (616)
T ss_pred HHHHHHHHHHHHhcccCCCe---e-eC-CCC-----CCCCCCCcHHHHHHHHHHHHHHhcccccccccchhhhHHHHHHH
Confidence 88889999998876543111 1 11 111 135567899999999999999988765 8899
Q ss_pred HHHHHHHHHhcCCCCCcCCCCCccccCC-CCCCccCCccccHHHH
Q 002202 846 TACGIYEAAWSGTGLGYAFQTPEAWNTD-DQYRSLCYMRPLAIWA 889 (954)
Q Consensus 846 l~~~i~~~~~~~~g~G~~~~~PE~~~~~-~~~r~~~Y~r~~a~Wa 889 (954)
+++++..+. +. .| -+||+++.. +...+ -.+.+||
T Consensus 568 ll~~~~~~~-~~--~G---ll~Eqvd~~~g~~~g----~~Pl~wS 602 (616)
T TIGR01577 568 LLKWVMDHR-TD--LG---LLPEQVDKETGKPAW----AVPLGWS 602 (616)
T ss_pred HHHHHHhcC-CC--CC---CCccccCCCCCCCCC----cCCcccc
Confidence 999998876 44 45 699999974 33322 2455676
No 10
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=99.83 E-value=4.4e-19 Score=220.43 Aligned_cols=291 Identities=18% Similarity=0.129 Sum_probs=207.9
Q ss_pred HHhhhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCccccCCChHHHHH
Q 002202 555 ALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWKDLNPKFVLQ 634 (954)
Q Consensus 555 al~~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~Dl~~~fVl~ 634 (954)
.|..-..+.+|.+|+.||..+. .|+||+.++.. ..+.|++.|+.+| ||.+
T Consensus 1050 lL~tGR~~eAk~ii~~fa~~lr--------------------~GLIPNll~~G----~~prYNt~DA~lW------fi~A 1099 (1464)
T TIGR01531 1050 LLTTGRFDEARAIILAFAGTLR--------------------HGLIPNLLDEG----INPRYNCRDAAWF------WLQC 1099 (1464)
T ss_pred eeccCCHHHHHHHHHHHHHHHH--------------------cCCCCCCCCCC----CcccccCccHHHH------HHHH
Confidence 3444678999999999998761 58999988642 2367999999999 9999
Q ss_pred HHHHHHHhCC-HHH----------------------HHHHHHHHHHHHHHHHh---h----------------------C
Q 002202 635 VYRDVVATGD-KKF----------------------AKAVWPSVYVAMAYMDQ---F----------------------D 666 (954)
Q Consensus 635 vyr~~~~TGD-~~f----------------------L~~~wp~vk~al~~l~~---~----------------------D 666 (954)
+++|++.++| .++ .+.+++.++.+|++..+ + -
T Consensus 1100 IqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeIl~~h~~G~~fRE~NAGp~iD~~M~deGfn~~I~ 1179 (1464)
T TIGR01531 1100 IQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEALQKHFQGIQFRERNAGPQIDRVMTDEGFNVTIG 1179 (1464)
T ss_pred HHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHcCCccccccccccchhhhccccccceEE
Confidence 9999999999 455 45678899999986531 1 0
Q ss_pred CC-CCCCccCCCCC---CCCCC-----------Cccc---cchhHHHHHHHHHHHHHHHHHHHHc-----CCcchHHHHH
Q 002202 667 RD-GDGMIENDGFP---DQTYD-----------TWSV---SGISAYSGGLWVAALQAASALAREV-----GDRGSEDYFL 723 (954)
Q Consensus 667 ~D-gDGL~e~~G~~---dqTyD-----------~w~~---~G~say~~~lw~aAL~aaa~mA~~L-----Gd~~~A~~~~ 723 (954)
.| .||||.. |.+ ..++| ++.+ .|..+.++||||+||+.+++|++.. |++.....|+
T Consensus 1180 vD~~~GLI~g-Gn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVEInaLwynAL~~~~~l~~~~~~~~~g~~~~~~~~~ 1258 (1464)
T TIGR01531 1180 VDWETGFIYG-GNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVEIVGLLKSALRFLIELKEKGVFKRSGVETQKWSYI 1258 (1464)
T ss_pred EcCCCCcEec-CCCCCCCCCcCCCCcccccccCCcccCCCCCCceeHHHHHHHHHHHHHHHHHhcCcCcCCcccchhhHH
Confidence 23 5899984 332 23466 2333 4788889999999999999999987 7765566799
Q ss_pred HHHHHHHHHHHH-hccCC--eeeEcCCC---------------C--CCCcccccccchhhHHHHHhCCC-CCCCHHHHHH
Q 002202 724 FKFQKAKVVYEK-LWNGS--YFNYDNSG---------------S--SQSSSIQADQLAGQWYARACGLL-PIVDEDKARS 782 (954)
Q Consensus 724 ~~a~~~k~~~~~-lWnG~--yy~~D~~~---------------~--~~~~si~adqL~Gqw~a~~~GL~-~ild~e~~~s 782 (954)
++++++++.|++ ||+.+ .|.||..+ . ..+.++++||++ +++|+ ++++++++++
T Consensus 1259 ~wa~~ik~~Fe~~F~~~~~~~~lyDv~~~~vnrrgIykD~~~s~~~~~D~qlRPN~~i------A~sla~~l~~~~~a~~ 1332 (1464)
T TIGR01531 1259 EWNQKIQDNFEKRFFVDESQDADYDVAKLGVNRRGIYKDSYGSTKPWTDYQLRPNFAI------AMTVAPELFVPEKAWK 1332 (1464)
T ss_pred HHHHHHHHHHhhhcCCCcccCccccccchhhccccccccccCCCCCCCCcccCCCceE------EEeCCcccCCHHHHHH
Confidence 999999999999 99843 34454322 1 136689999987 56775 5999999999
Q ss_pred HHHHHHHhccccccCCcceeecCcCCC--------Cccc--------CCCCccCCccchHH-HHHHHHHHHcCC---h--
Q 002202 783 ALKKVYNYNVLKVMGGKRGAVNGMLPD--------GRVD--------MSSMQSREIWSGVT-YAVAASMIHEDL---A-- 840 (954)
Q Consensus 783 aL~~v~~~n~~~~~~g~~G~~~g~~p~--------G~~~--------~~s~~s~evW~g~~-y~lAa~mi~~G~---~-- 840 (954)
+|+.+ +.+++| +|+.+....+ |..+ ..+||+|.+|++.. |.+-|.+...+. .
T Consensus 1333 ~L~~v-~~LltP-----~GlRTLdP~D~~Y~g~Y~g~~dsrD~~t~kg~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~ 1406 (1464)
T TIGR01531 1333 ALTIA-EVLLGP-----LGMKTLDPSDWNYRGYYNNGEDSDDFATAKGRNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQ 1406 (1464)
T ss_pred HHHHH-HHhccC-----CccccCCCCCcCCCCccCCchhhccccccccccccCCCcCccchhHHHHHHHHhccccccchh
Confidence 99999 888865 5665543211 2221 13899999999983 333333333332 1
Q ss_pred ----HHHHHHHHHHHHHHhcCCCCCcCCCCCccccCCCCCCccCCccccHHHHHHHHH
Q 002202 841 ----DIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWAMQWAL 894 (954)
Q Consensus 841 ----eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~Wa~~~Al 894 (954)
.++.+.+.++.+++ .+.| +..+||++|+++++++. ..+.++||+-..|
T Consensus 1407 ~~~~~~~~~~L~~~~~~l-~~~~---~g~l~El~dgdgp~~~~--gc~aQAWSvaelL 1458 (1464)
T TIGR01531 1407 AAAIKPVSYLLQQLYYHL-KESP---WRGLPELTNKDGEYCND--SCPTQAWSVACLL 1458 (1464)
T ss_pred hHHHHHHHHHHHHHHHHH-HhcC---CCCcccccCCCCCCCCC--CCHHHHHHHHHHH
Confidence 13355566777777 4444 44899999999887421 2389999966544
No 11
>PF03512 Glyco_hydro_52: Glycosyl hydrolase family 52; InterPro: IPR000852 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 52 GH52 from CAZY comprises enzymes with only one known activity; beta-xylosidase (3.2.1.37 from EC). Proteins harboring beta-xylosidase and xylanase activities []have been identified in the Gram-positive, facultative thermophilic aerobe Bacillus stearothermophilus 21 []. This microbe, which functions in xylan degradation, can utilise xylan as a sole source of carbon. The enzyme hydrolyses 1,4-beta-D-xylans, removing successive D-xylose residues from the non-reducing termini. It also hydrolyses xylobiose.; GO: 0009044 xylan 1,4-beta-xylosidase activity, 0005975 carbohydrate metabolic process
Probab=99.76 E-value=1.1e-17 Score=183.65 Aligned_cols=300 Identities=18% Similarity=0.240 Sum_probs=197.2
Q ss_pred EEEEEEeccccc---------CCcccCCCceEEEEEEEEeCCC-CeEEEEEEEEecCCCCCCCcCCCcccccccccCCCe
Q 002202 201 RIVCRQISPIIP---------HNYKESSYPVSVFTYTIYNSGK-TSADITLLFTWTNSVGGDSEFTGQHYNSKTKMNDGV 270 (954)
Q Consensus 201 ~v~~~~~SP~IP---------~d~k~SSlPvavf~~~v~N~~~-~~~~vsi~ft~~N~vG~~~~~~~~~~n~~~~~~~~v 270 (954)
.++++.+|||-| .+.|...+|+...++++.|+++ ++.+.-|.+ ++..-+..- ...+.. ....+
T Consensus 98 ~ltf~i~Spf~~VPDP~~a~~~elr~Al~Pav~~elt~DNt~~~~~~~~fFG~--~g~dp~s~~---R~l~d~--~~g~l 170 (428)
T PF03512_consen 98 DLTFRIYSPFGSVPDPATADEEELRFALCPAVLAELTLDNTSGTEPRRAFFGL--QGNDPYSAM---RRLSDT--TGGRL 170 (428)
T ss_pred CEEEEEEcCCcCCCCcccCCHHHHHhhcCCeEEEEEEEeCCCCCceeeeEeee--cCCCccccc---cccCCC--CCCce
Confidence 577888999976 6788999999999999999875 676666655 443221000 001111 00123
Q ss_pred eEEEeeecCCCCCCceEEEEEEecCCCeEEEEeceeeecCCCcccchHHHHHHHHhcCCCCCCCCccCCCCCCCCCceeE
Q 002202 271 HAVLLHHRTSHQLPPVTFALAAQETDGVHVSLCPHFVISGNSLGLTAKDMWHEIKEHGSFDRLNSMETSVTSEPGSSIGA 350 (954)
Q Consensus 271 ~Gv~l~~~~~~~~~~~t~aiaa~~~~~v~vs~~~~f~~~~~~~~~~~~~~W~~~~~~G~l~~~~~~~~~~~s~~g~~~~~ 350 (954)
.|+.- ...++||+. .++|... ..|++ .+.+ . +. .+..+...+|.
T Consensus 171 ~G~~~---------gr~~~iAt~-~~~v~~~--~~f~~---------~~~l----~-----~~------~~~~~~f~Lg~ 214 (428)
T PF03512_consen 171 CGVGQ---------GRQTGIATA-DPGVEEA--MDFDM---------EDAL----F-----NK------HPENPEFGLGP 214 (428)
T ss_pred EEEec---------CcEEEEEeC-CCCceee--cCcCH---------hHhh----c-----cc------ccCCcccccCc
Confidence 34332 236888875 4666321 22321 1111 1 10 01123344666
Q ss_pred EEEEEEEecCCCeEEEEEEEEeecCcccccCCcceecccccccCCccchHHHHHHHHHHhhhhHHHHHHHhcccccccCC
Q 002202 351 AIAASVTVPPDSEGQVTFSLAWDCPEVNFMSGKTYYRRYTKFYGTHQNAAANIARDAILEHGSWELQIEAWQRPILEDKR 430 (954)
Q Consensus 351 ava~~~~l~pg~~~tv~F~LaW~~P~~~f~~g~~~~rrYt~ff~~~~~~a~~ia~~al~~~~~we~~i~~wq~pil~d~~ 430 (954)
.-+..+.|||||++|++|+|+.|--.+. ..|..-.++||+||.+ ..+|++|||.+.....+...+-+.- |++..
T Consensus 215 ~gaL~~~VpaGE~~t~~~al~fY~~G~v-T~g~~~syyYTr~F~~----ie~V~~yaL~~~~~~~a~a~~~d~~-l~~s~ 288 (428)
T PF03512_consen 215 TGALLFDVPAGEKRTYRFALCFYRGGIV-TTGLDTSYYYTRLFKD----IEEVLEYALENFDRYLALAAERDEE-LESSG 288 (428)
T ss_pred cceEEEEeCCCceEEEEEEEEEeecCeE-ecCcccceehhhhhcC----HHHHHHHHHHhHHHHHHHHHHHhHH-HhhcC
Confidence 7788999999999999999999975553 4577788899999986 8999999999999998888876432 22222
Q ss_pred CCCcccccccchhhhhccCceeeecCCCCccccccccccccccccccccccccccCCCCCchhHHHHHhhhhhhhhcccc
Q 002202 431 LPEWYPITLFNELYYLNAGGAVWTDGSPPVHSLVTIGHRKFSLDWSQSDLKRIVDVPNQNDTAVNILERMSSILEQIYTP 510 (954)
Q Consensus 431 lP~Wyk~alfNely~l~~Ggt~w~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (954)
| ++.++|.+|
T Consensus 289 L----------------------------------sedqkFmlA------------------------------------ 298 (428)
T PF03512_consen 289 L----------------------------------SEDQKFMLA------------------------------------ 298 (428)
T ss_pred C----------------------------------ChhHHHHHH------------------------------------
Confidence 1 245777743
Q ss_pred ccccCcc-ccccccCCCCCcCceeeecccccccccccchhhHHHHHHhhhChHH------HHHHHHHHHHHhhccCCCCc
Q 002202 511 VALNSSF-GTNLLQDGEENIGQFLYLEGIEYLMWNTYDVHFYSSFALIMLFPKI------QLSIQRDFAAAVMMHDPSKM 583 (954)
Q Consensus 511 ~~~~~~~-~t~l~~~~~~~~Grf~~~EG~ey~~~nT~DV~fYas~al~~L~PeL------~rs~l~~fa~~~~~~D~~~~ 583 (954)
++.||++ +|+|++++. ...|.+.|| ||+|+||+| +.+.+||-|| .|++|+.|.......|.-
T Consensus 299 hA~hSYYgSTqLL~~~G--~PlWVVNEG-EYrMmNTfD------LTvDqlFfEL~~nPWTVrN~Ld~fv~rYSY~D~V-- 367 (428)
T PF03512_consen 299 HATHSYYGSTQLLDDDG--KPLWVVNEG-EYRMMNTFD------LTVDQLFFELKFNPWTVRNVLDLFVERYSYRDEV-- 367 (428)
T ss_pred HHHHhhhcchhhhhcCC--ceEEEEecc-eeEEeehhh------hhHHHhhhheecCcceehhhHHHHhhhceecccc--
Confidence 4567787 788885322 256999999 999999999 7888888888 799999999888776641
Q ss_pred eecccccccccccCCC--CCCCCCCCCCCccccccccccCccccCCChHHHHHHHHH
Q 002202 584 KLLDDGQWVSRKVLGA--VPHDIGICDPWFEVNAYCLYDTARWKDLNPKFVLQVYRD 638 (954)
Q Consensus 584 k~~~~G~~~~rk~~G~--iPhdlG~~~Pw~~~~~Y~~~D~~~W~Dl~~~fVl~vyr~ 638 (954)
++ -|. ....+|. .-||+|..+.|.. +.| .+++...+.-||.+|.++-
T Consensus 368 ~~--p~d--~~~yPgGisFtHDMGVaN~FS~-~g~---SsYEl~gLd~CFS~MT~Eq 416 (428)
T PF03512_consen 368 RF--PGD--ETEYPGGISFTHDMGVANHFSP-PGY---SSYELPGLDGCFSHMTHEQ 416 (428)
T ss_pred cC--CCC--ccccCCceeeecccccccccCC-CCc---ceeecCCccchhhccCHHH
Confidence 11 111 1111333 5699999877765 333 2334456677899988875
No 12
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4.1e-15 Score=177.57 Aligned_cols=264 Identities=20% Similarity=0.274 Sum_probs=195.9
Q ss_pred ccccchhhHHHHHHhhhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCcc-c--cccccc
Q 002202 543 WNTYDVHFYSSFALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFE-V--NAYCLY 619 (954)
Q Consensus 543 ~nT~DV~fYas~al~~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~-~--~~Y~~~ 619 (954)
|-+-|+. -.-+++++..|+++|..+.+.|+.|..+ |-+||-+ .|-.. . -.-...
T Consensus 612 ~GfRD~~-Qd~l~f~~~~p~~aR~qIl~~as~Qf~e-------------------Gd~~hWf---~p~t~ag~qir~~~s 668 (1056)
T COG3459 612 FGFRDQL-QDTLEFLLARPALARKQILDAASRQFVE-------------------GDVQHWF---LPDTYAGVQIRTSIS 668 (1056)
T ss_pred ecccccc-ccchhhhhcCHHHHHHHHHHHHhhcccC-------------------CCccccc---cccccccchhhcccC
Confidence 3455665 3347888888999999999988887432 4556532 11110 0 011235
Q ss_pred cCccccCCChHHHHHHHHHHHHhCCHHHHHH-------------------HHHHHHHHHHHHH-hhCCCCCCCccCCCCC
Q 002202 620 DTARWKDLNPKFVLQVYRDVVATGDKKFAKA-------------------VWPSVYVAMAYMD-QFDRDGDGMIENDGFP 679 (954)
Q Consensus 620 D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~-------------------~wp~vk~al~~l~-~~D~DgDGL~e~~G~~ 679 (954)
|...| .+..+-.|.+.|||.++|++ +|+||++|++.+. +..+ .|||...| .
T Consensus 669 DdvvW------l~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TLyEH~~rAld~av~r~g~--~glpli~g-G 739 (1056)
T COG3459 669 DDVVW------LLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATLYEHCARALDLAVARLGP--HGLPLILG-G 739 (1056)
T ss_pred Cceee------eHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhHHHHHHHHHHHHHHhcCC--CCcccccC-C
Confidence 77788 89999999999999999964 5999999999975 5665 58888655 4
Q ss_pred CCCCCCccc-----cchhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCCeee--EcCCC---
Q 002202 680 DQTYDTWSV-----SGISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGSYFN--YDNSG--- 748 (954)
Q Consensus 680 dqTyD~w~~-----~G~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~yy~--~D~~~--- 748 (954)
| +.|+... .|.|++++.+...+|+...++|+.+|+.+.+.+|.+.++.+++++++ .|+|+||+ |...+
T Consensus 740 D-WND~ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~r~d~~r~~~~~~~~ea~~~~~~~~~wDg~wy~r~~~d~g~~l 818 (1056)
T COG3459 740 D-WNDGLNLVGNGGKGESVWLGWFLALTLQTFKELAKARGDEARADTWAKHVEALREALETNGWDGEWYRRGYGDDGTPL 818 (1056)
T ss_pred c-ccccccccccCCccceeehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCCcceEEeccccCCCcc
Confidence 4 4555433 47999999999999999999999999999999999999999999999 99999988 32222
Q ss_pred -CCCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccc-----------CCcceeecCcCCCCcccCCC
Q 002202 749 -SSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVM-----------GGKRGAVNGMLPDGRVDMSS 816 (954)
Q Consensus 749 -~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~-----------~g~~G~~~g~~p~G~~~~~s 816 (954)
+..+..|..+. +.|-|+.++| ..|+++++++|+.|+++++.+.. .++.|.+.+ +|.|..++..
T Consensus 819 gs~e~~E~qI~~-i~qs~sVlSg---~gd~~ra~kaMd~v~k~L~~pdgvrL~tppf~~~~~~~gyiK~-y~pgvREnGg 893 (1056)
T COG3459 819 GSPEDEECQIDS-IPQSWSVLSG---EGDKERAEKAMDSVMKYLVDPDGVRLFTPPFSYTKGDPGYIKR-YPPGVRENGG 893 (1056)
T ss_pred cCCCCcccceee-eccchhhhhC---CCChHHHHHHHHHHHHhccCccccEecCCcccccCCCCCeeec-CCcccccccc
Confidence 23455667665 6788999999 56899999999999999997642 234444444 3445555556
Q ss_pred CccC-CccchHHHHHHHHHHHcCChHHHHHHHHHH
Q 002202 817 MQSR-EIWSGVTYAVAASMIHEDLADIGFQTACGI 850 (954)
Q Consensus 817 ~~s~-evW~g~~y~lAa~mi~~G~~eeA~~l~~~i 850 (954)
.++| .+|. ..+|...|+.+||+++++.+
T Consensus 894 QYtHa~~w~------i~Alak~G~a~eAw~~f~~i 922 (1056)
T COG3459 894 QYTHAATWV------ILALAKMGRADEAWELFDKI 922 (1056)
T ss_pred eeecccHHH------HHHHHhhccHHHHHHHHHhc
Confidence 6666 6775 44566679999999998864
No 13
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=99.61 E-value=3.8e-11 Score=144.88 Aligned_cols=504 Identities=14% Similarity=0.106 Sum_probs=290.2
Q ss_pred ceeEEeeccCCCCCeEEEEEEecccccCCcccCCCceEEEEEEEEeCCCCeEEEEEEEEecCCCCCCCcCCCcccccccc
Q 002202 186 PRAWTVHEGEPDPELRIVCRQISPIIPHNYKESSYPVSVFTYTIYNSGKTSADITLLFTWTNSVGGDSEFTGQHYNSKTK 265 (954)
Q Consensus 186 P~aw~~y~~~~~~~v~v~~~~~SP~IP~d~k~SSlPvavf~~~v~N~~~~~~~vsi~ft~~N~vG~~~~~~~~~~n~~~~ 265 (954)
|.-.++++ .++...+|+.+-|. |-..+|-+-.++|+|..++..++.+.+-..=-++..+ .-|..+.
T Consensus 58 ~~~~~~~~-~~~~~~~i~~~~~~--------dp~~~~l~~~v~~~~~~~~~~~~~l~~~~~p~l~~~g-----~~n~a~~ 123 (648)
T TIGR01535 58 LAYKLTNT-DKKGRYRITKQIFT--------DPKRNALILKVTFEALKGSIGDYKLYLLLDPHLANTG-----GGNSGYV 123 (648)
T ss_pred CeEEEEEE-cCCCcEEEEEEEec--------CCCccEEEEEEEEEeCCCCCCCeEEEEEECCcccCCC-----CCCeEEE
Confidence 55667777 56777888887765 4578999999999998877777777664321233211 1133332
Q ss_pred cCCCeeEEEeeecCCCCCCceEEEEEEecCCCeEEEEeceeeecCCCcccchHHHHHHHHhcCCCCCCCCccCCCCCCCC
Q 002202 266 MNDGVHAVLLHHRTSHQLPPVTFALAAQETDGVHVSLCPHFVISGNSLGLTAKDMWHEIKEHGSFDRLNSMETSVTSEPG 345 (954)
Q Consensus 266 ~~~~v~Gv~l~~~~~~~~~~~t~aiaa~~~~~v~vs~~~~f~~~~~~~~~~~~~~W~~~~~~G~l~~~~~~~~~~~s~~g 345 (954)
....-.+++.+. + .+..++|.+... =...++ |. +...+.|.++.+||+|+..- ...+
T Consensus 124 ~~~~~~~~l~~~-~----~~~~~al~s~~~-f~~~s~-------G~---~g~sd~~~dl~~~g~L~~~~-------~~~~ 180 (648)
T TIGR01535 124 IKYANNEMLMAK-G----DNVYLALVSSIG-WKAASA-------GY---VKVSDGMTDLDANGQLTKHY-------DSAR 180 (648)
T ss_pred ecCCCceeEEEe-C----CCeEEEEeCCCC-ccceee-------cc---ccCCchHHHHHhCCCccccc-------ccCC
Confidence 211112334432 2 135566665431 111111 11 11246899999999987642 1122
Q ss_pred CceeEEEEEEEEecCCC-eEEEEEEEEeecCcccccCCcceecccccccCCccchHHHHHHHHHH-hhhhH-HHHHHHhc
Q 002202 346 SSIGAAIAASVTVPPDS-EGQVTFSLAWDCPEVNFMSGKTYYRRYTKFYGTHQNAAANIARDAIL-EHGSW-ELQIEAWQ 422 (954)
Q Consensus 346 ~~~~~ava~~~~l~pg~-~~tv~F~LaW~~P~~~f~~g~~~~rrYt~ff~~~~~~a~~ia~~al~-~~~~w-e~~i~~wq 422 (954)
.++|+....|++++ ++++.++|+. +.....|...+..+|. .++.. ++-+..|+
T Consensus 181 ---~gnv~~~g~l~~~~~~~~f~l~lgf---------------------g~~~~~a~~~~~~~l~~g~~~~~~~~~~~W~ 236 (648)
T TIGR01535 181 ---DGNIILAAEIDLTKASETFELVLGF---------------------GASAYEAAKTAVATLKEGYRRVKDAYIDEWE 236 (648)
T ss_pred ---CCCeEEEEEecCCCCceEEEEEEEe---------------------CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 25788888999888 5678888773 2333456666766663 44444 33344454
Q ss_pred ccccccC-CCCCcccccccchhhhhccCceeeecCCCCccccccccccccccccccccccccccCCCCCchhHHHHHhhh
Q 002202 423 RPILEDK-RLPEWYPITLFNELYYLNAGGAVWTDGSPPVHSLVTIGHRKFSLDWSQSDLKRIVDVPNQNDTAVNILERMS 501 (954)
Q Consensus 423 ~pil~d~-~lP~Wyk~alfNely~l~~Ggt~w~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (954)
+ -++.. .+ ...+.++|+-+ +. +.+-..+ -.+.+ ++.
T Consensus 237 ~-w~~~~~~~-----~~~~~~~~~rS---------------~l---vLK~~~d-----------~~~~G--------AiI 273 (648)
T TIGR01535 237 K-YLNSLNNF-----NGKGNSLYYVS---------------MM---ILKAHED-----------KTNPG--------AYI 273 (648)
T ss_pred H-HHhccccC-----CchHHHHHHHH---------------HH---HHHHhcC-----------CCCCC--------cEE
Confidence 3 22221 11 12344444311 00 0000000 00001 111
Q ss_pred hhhhhccccccccCccccccccCCCCCcCceeeecccccccccccchhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCC
Q 002202 502 SILEQIYTPVALNSSFGTNLLQDGEENIGQFLYLEGIEYLMWNTYDVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDP 580 (954)
Q Consensus 502 ~~~~~~~~~~~~~~~~~t~l~~~~~~~~Grf~~~EG~ey~~~nT~DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~ 580 (954)
| +++ |.+ .+.+| .-....|+..=.-|-.|-+ .||+. -+.+.++..++.+.+.|. .|+
T Consensus 274 A------A~T-------ts~----pe~~g---~~~n~dYryvW~RD~a~~a-~AL~~~G~~~~a~~~~~~l~~~~~-~~G 331 (648)
T TIGR01535 274 A------SLS-------IPW----GDGQA---DDNTGGYHLVWPRDLYQVA-NAFLAAGDVDSALRSLDYLAKVQQ-DNG 331 (648)
T ss_pred E------ecC-------CCC----CccCC---CCCCCceEEEehhhHHHHH-HHHHHCCCHHHHHHHHHHHHHHhc-cCC
Confidence 0 000 111 00111 0112345532234887666 77766 799999999998888773 232
Q ss_pred C-CceecccccccccccCCCCCCCCCCCCCCccccccccccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 002202 581 S-KMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAM 659 (954)
Q Consensus 581 ~-~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al 659 (954)
. ..++. +.|.. .|. ..| .|.....|+++|.+++. +. ..+|+.|++++
T Consensus 332 ~~lq~y~---------vdG~~--------~~~-----~iQ-----lD~~g~~i~~~~~l~~~--~~---~~~~~~vk~aa 379 (648)
T TIGR01535 332 MFPQNSW---------VDGKP--------YWT-----GIQ-----LDETAFPILLAYRLHRY--DH---AFYDKMLKPAA 379 (648)
T ss_pred CcCceec---------cCCCC--------CCC-----Ccc-----ccHHHHHHHHHHHHHHc--Cc---HHHHHHHHHHH
Confidence 1 11111 11211 111 123 56676678888888874 22 45799999999
Q ss_pred HHHHhhCCCCCCCccCCCCCCCCCCCccc-cchhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hc
Q 002202 660 AYMDQFDRDGDGMIENDGFPDQTYDTWSV-SGISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LW 737 (954)
Q Consensus 660 ~~l~~~D~DgDGL~e~~G~~dqTyD~w~~-~G~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lW 737 (954)
+|+.+.- +-..+|.|+. .|.+.|+-+..++||.+|++||+.+|+++.+++|++.|++.++.+.+ +|
T Consensus 380 dfl~~~~------------p~p~~d~WEer~g~~~~T~a~v~aaL~~Aa~iA~~~g~~~~a~~w~~~Ad~i~~~i~~~~~ 447 (648)
T TIGR01535 380 DFIVKNG------------PKTGQERWEEIGGYSPSTLAAEIAGLTAAADIAEQNGDAGSAQKYRETADNWQKLIENWTF 447 (648)
T ss_pred HHHHHcC------------CCCCCCcccccCCcCchhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCc
Confidence 9987632 2235788986 47889998888899999999999999998899999999999999999 99
Q ss_pred cCC-------eee-EcCCCC----------------CCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccc
Q 002202 738 NGS-------YFN-YDNSGS----------------SQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVL 793 (954)
Q Consensus 738 nG~-------yy~-~D~~~~----------------~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~ 793 (954)
+.+ +|. .-..+. ..++.+-++-| .+..+|+-+ .++.++.++|+.|.+.+..
T Consensus 448 ~~~g~~~~~~~f~r~~~~~~~~~~~~~~~~n~~~~~~~~~~vDaSlL----~L~~~G~~~-~dDPri~~Tl~aIe~~L~~ 522 (648)
T TIGR01535 448 TTNGPLGDGQYYLRIAGLGDPNADFLINIANGGGVYPEKEVLDPGFL----ELVRLGVKS-PDDPHILATLKEIDSTIKV 522 (648)
T ss_pred CCCcccCCCCeEEEeecCCCCccccccccccccccCCCCCccCHHHH----HHHHcCCcC-CCCHHHHHHHHHHHHHhcc
Confidence 854 665 311100 11223332211 245577643 4567999999999887653
Q ss_pred ccc--CCcceeecCcC---CCCcccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCc
Q 002202 794 KVM--GGKRGAVNGML---PDGRVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPE 868 (954)
Q Consensus 794 ~~~--~g~~G~~~g~~---p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE 868 (954)
... ++-+.+.+.-+ .+|.+.. .-+.|++||.+|.+++...+..|. +|.++++++.... +. -| -+||
T Consensus 523 ~~~~~g~~~RY~~Dgyg~~~~~~~~~-~~~~G~~Wpi~T~~~~~y~l~~~~--~a~~~l~~~~~~a-~~--~g---~lpE 593 (648)
T TIGR01535 523 DTPKGPSWYRYTHDGYGEPAKTEAYD-GTGKGRLWPLLTGERGHYELAAGK--DATPYLKAMEKFA-NE--GG---MIPE 593 (648)
T ss_pred CCCCCCeEEecCCCCCCCcCCCCCcc-CCcCCceeehhhhHHHHHHHHcCC--hHHHHHHHHHHhc-Cc--CC---CcCc
Confidence 210 11111111111 1121111 235579999999999999888775 5789999998887 44 24 6999
Q ss_pred cccCC
Q 002202 869 AWNTD 873 (954)
Q Consensus 869 ~~~~~ 873 (954)
++...
T Consensus 594 QV~d~ 598 (648)
T TIGR01535 594 QVWDQ 598 (648)
T ss_pred ccCCC
Confidence 99654
No 14
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.51 E-value=1.9e-13 Score=162.79 Aligned_cols=294 Identities=18% Similarity=0.268 Sum_probs=175.4
Q ss_pred chhhHHHHHHhhhC--hHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCccc
Q 002202 547 DVHFYSSFALIMLF--PKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARW 624 (954)
Q Consensus 547 DV~fYas~al~~L~--PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W 624 (954)
|.+..+ .+....| .++.|..+++|++.|. . .|.+|.-.+... ........|
T Consensus 153 D~~~~~-~~~~~~~~~~~l~~~~l~~~~~~q~-~------------------~G~~p~~~P~~~-------~~~~~~~~w 205 (509)
T PF05592_consen 153 DARVSA-LTAYYSFGDAALYRKWLRDFADSQR-P------------------DGLLPSVAPSYG-------GGGFGIPDW 205 (509)
T ss_dssp HHHHHH-HHHHCCT--HHHHHHHHHHHHGGTT-T------------------STT-SSBSS----------SSGGGBHHH
T ss_pred hHHHHH-HHHHHhCCcHHHHHHHHHHHHHhhc-c------------------cCCceEEecccC-------CCCCCCccH
Confidence 555444 3333333 5678888888888762 1 355555332110 111222333
Q ss_pred cCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCCCCCcc--------ccchhHHHH
Q 002202 625 KDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDTWS--------VSGISAYSG 696 (954)
Q Consensus 625 ~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~~D~DgDGL~e~~G~~dqTyD~w~--------~~G~say~~ 696 (954)
.+.+|+.++.||+.|||.+||+++||.+++.|+|+..+..+ |+.. ..+..+-+|. ..+.....+
T Consensus 206 ---~l~~i~~~~~~y~~tGD~~~l~~~~~~~~~~l~~~~~~~~~--~~~~---~~~~~~~DW~~~~~~~~~~~~~~~~~~ 277 (509)
T PF05592_consen 206 ---SLAWIIIPWDYYLYTGDREFLEEYYPAMKRYLDYLERRVDD--GLDG---LPGWGFGDWLAPGNDGDGPTPGATITN 277 (509)
T ss_dssp ---HHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHTTB-T--SSB----CCSB--S-SS----TT---SCCEEHHH
T ss_pred ---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCCc--cccC---CCCCceeecCCccCcccccchHHHHHH
Confidence 33489999999999999999999999999999999774433 3331 1223344455 134556689
Q ss_pred HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCCeeeEcCCCCCCCcccccccchhhHHHHHhCCCCCC
Q 002202 697 GLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGSYFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIV 775 (954)
Q Consensus 697 ~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~il 775 (954)
+++|.+|+++++||+.||+++.|++|+++++++|++|++ |||.+--.+... + | ..+.+|.++|+ +
T Consensus 278 ~~~~~~l~~~a~lA~~lg~~~~a~~y~~~a~~lk~a~~~~~~d~~~g~~~~~------s----q-~~~alAl~~gl---~ 343 (509)
T PF05592_consen 278 ALYYYALRAAAELAEALGKDEDAAEYRARAERLKAAINRHFWDPEKGGYADG------S----Q-HANALALLFGL---V 343 (509)
T ss_dssp HHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHCEETTTTEECTT------S----H-CHHHHCHHCCH---C
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCcccCcccCC------c----h-HHHHHHHHhch---h
Confidence 999999999999999999999999999999999999999 996442222211 1 1 24557788884 6
Q ss_pred CHHHH-HHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHH---
Q 002202 776 DEDKA-RSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIY--- 851 (954)
Q Consensus 776 d~e~~-~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~--- 851 (954)
|+++. ..+++.+.+ .+.. . +.. +. .+.+ + ++.+-..+.+.|..+.|++++....
T Consensus 344 p~~~~~~~~~~~l~~-~~~~-----~----~~~----~~-----~g~~--g-~~~~~~~L~~~g~~~~a~~~~~~~~~~~ 401 (509)
T PF05592_consen 344 PEEERAAAALKRLAK-RIAA-----N----GYH----LS-----TGFI--G-SPYLLEALFRAGRADGAYDLLTQRDYPS 401 (509)
T ss_dssp -HHHHTCHCHCHCHH-CCHC-----C----CHS-----------TCCC----CHHHHHHHHHCCHHCCHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHH-HHHh-----c----CCC----cC-----cccc--c-HHHHHHHHHHcCCHHHHHHHHHhccccc
Confidence 66655 444433332 1110 0 001 11 1111 2 2334577778898888888887543
Q ss_pred -HHHhcCCCCCcCCCCCccccC---CCCCC-ccCCccccHHHHHHHHHhCCCCCCCC-CeeeeeccC-chh
Q 002202 852 -EAAWSGTGLGYAFQTPEAWNT---DDQYR-SLCYMRPLAIWAMQWALTRPKPKTLE-KQMKPEVTD-ESL 915 (954)
Q Consensus 852 -~~~~~~~g~G~~~~~PE~~~~---~~~~r-~~~Y~r~~a~Wa~~~Al~g~~~~a~~-~~l~~~~~~-~~~ 915 (954)
..... .| .-.++|.|++ .+..+ -+|.+.+.-+..|...+.|+++..+. +++.|.|.+ +.+
T Consensus 402 w~~ml~---~g-~tT~wE~w~~~~~~~~~~S~~H~w~~~p~~~l~~~v~GI~p~~pG~~~~~i~P~~~~~L 468 (509)
T PF05592_consen 402 WGYMLD---QG-ATTLWEYWDGDGGDPPNRSLCHAWSAGPTYWLYRYVLGIRPTEPGFKEFRIAPQPPGDL 468 (509)
T ss_dssp CHHHHC---TT--SS--SS-STT-TCTT-S-SSBGGG-THHHHHHHCTS-EEESSGGGSEEEE-----TT-
T ss_pred hhHHHh---CC-CCEEEEecCccCCCCCCCCCCCCcchhHHHHHHHHhhceEeCCCCCcEEEEEEecCCCC
Confidence 33322 23 3467999996 22333 47888776676799999999998777 789999997 543
No 15
>PRK13271 treA trehalase; Provisional
Probab=99.34 E-value=2.3e-10 Score=135.81 Aligned_cols=269 Identities=16% Similarity=0.214 Sum_probs=185.3
Q ss_pred chhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCcccc
Q 002202 547 DVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWK 625 (954)
Q Consensus 547 DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~ 625 (954)
|..|-. .+|+. -..+++|+|++.|+..|.+ .|.||+--. -||-..
T Consensus 164 DSY~i~-~GLl~s~~~~~a~~mi~Nf~~~i~~-------------------yG~IPNg~R--------~YYl~R------ 209 (569)
T PRK13271 164 DSYFTM-LGLAESGHWDKVADMVANFAHEIDT-------------------WGHIPNGNR--------SYYLSR------ 209 (569)
T ss_pred HHHHHH-HhhHhcCCHHHHHHHHHHHHHHHHH-------------------hCcCcCCch--------hhcccC------
Confidence 555454 78877 7889999999999988732 688998432 234333
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHhh--------------CCCCCCCccCC----C---------
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAY-MDQF--------------DRDGDGMIEND----G--------- 677 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~-l~~~--------------D~DgDGL~e~~----G--------- 677 (954)
.-.|.|..||..|+..|+| +||++..|.+++=.+| +... ..++.+|-.+. +
T Consensus 210 SQPP~l~~Mv~~~~~~~~~-~~l~~~lp~l~kEy~~Wm~~~~~~~~~~~~~r~v~~~~~~~L~rY~~~~~~PRpEsy~eD 288 (569)
T PRK13271 210 SQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMEGVENLQPGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVED 288 (569)
T ss_pred CCChhHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHhCCCcccCccccccceEEeCCCCcccccccCCCCCCCCcHHHH
Confidence 2346799999999999988 6999999999987774 5421 12344444331 0
Q ss_pred ---------------------CCCCCCCC---ccccc-----------hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHH
Q 002202 678 ---------------------FPDQTYDT---WSVSG-----------ISAYSGGLWVAALQAASALAREVGDRGSEDYF 722 (954)
Q Consensus 678 ---------------------~~dqTyD~---w~~~G-----------~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~ 722 (954)
....+||. |-..+ ..+-+++++|.+.+.++++|+.+|+.+.+++|
T Consensus 289 ~~~a~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~~i~t~~IiPVDLNALLy~ae~~LA~la~~lGd~~~A~~y 368 (569)
T PRK13271 289 IATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTIRTTSIVPVDLNALMFKMEKILARASKAAGDNAMANQY 368 (569)
T ss_pred HHHHhhCCcchHHHHHHHHHHHhhcCCcchhhhccCCccccccccccccCchHHHHHHHHHHHHHHHHHHhCChhhHHHH
Confidence 01223443 22111 33557999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-hccCC---eeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCC
Q 002202 723 LFKFQKAKVVYEK-LWNGS---YFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGG 798 (954)
Q Consensus 723 ~~~a~~~k~~~~~-lWnG~---yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g 798 (954)
++.|++.+++|++ |||++ ||.||.......+... +..+++..+| ++++++++++++.+.+..+.
T Consensus 369 ~~~A~~rr~AI~~~LWnee~G~f~DYDl~~~~~r~~~s----aa~f~PLwag---~a~~~qA~~Vv~~l~~~Ll~----- 436 (569)
T PRK13271 369 ETLANARQKAIEKYLWNDKEGWYADYDLKSHKVRNQLT----AAALFPLYVN---AAAKDRANKVAAATKTHLLQ----- 436 (569)
T ss_pred HHHHHHHHHHHHHhcccCCCCEEEEEECCCCCEeechh----HHHHHhhhcC---CCCHHHHHHHHHHHHHhcCC-----
Confidence 9999999999999 99854 6778865322122222 2344677777 57899999998887655543
Q ss_pred cceeecCcCCCC-cccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHH---hcCCCCCcCCCCCccccC
Q 002202 799 KRGAVNGMLPDG-RVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAA---WSGTGLGYAFQTPEAWNT 872 (954)
Q Consensus 799 ~~G~~~g~~p~G-~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~---~~~~g~G~~~~~PE~~~~ 872 (954)
..|++......| ..+.+ ++|+-.++.+..+|.++|..+.|.++...-.+.. |.+.| ..-|-||.
T Consensus 437 pgGLpTt~~~SgqQWD~P-----ngWaPlq~iiieGL~~yG~~~lA~~la~rwl~~~~~~~~~~g-----~m~EKYd~ 504 (569)
T PRK13271 437 PGGLNTTSVKSGQQWDAP-----NGWAPLQWVATEGLQNYGQKEVAMDVTWRFLTNVQHTYDREK-----KLVEKYDV 504 (569)
T ss_pred CCCccCCCCCCCCCCcCc-----ccCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcccC-----ceEEeeCC
Confidence 245655432222 22322 5799999999999999999999999888655543 33322 45677765
No 16
>PLN03005 beta-fructofuranosidase
Probab=99.32 E-value=4.6e-10 Score=127.83 Aligned_cols=252 Identities=15% Similarity=0.218 Sum_probs=158.1
Q ss_pred ccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH----HhhCCCCCCCccCCCCCCCCCC-CccccchhH
Q 002202 619 YDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYM----DQFDRDGDGMIENDGFPDQTYD-TWSVSGISA 693 (954)
Q Consensus 619 ~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l----~~~D~DgDGL~e~~G~~dqTyD-~w~~~G~sa 693 (954)
+|+.+| ||+.++.|.+.|||.+|.++ |.|+++|.++ ....-|...++.-.... ...| --.+.|...
T Consensus 203 VDS~LW------WIIllraY~k~tgD~s~~e~--pevQrgi~lil~lcLa~~Fd~~ptLlvpDgs-~miDRrMgv~G~pL 273 (550)
T PLN03005 203 VDSGFW------WIILLRAYTKSTGDLTLSET--PECQKGMKLILSLCLAEGFDTFPTLLCADGC-SMIDRRMGVYGYPI 273 (550)
T ss_pred cchhhH------HHHHHHHHHhhccchhhhhC--hHHHHHHHHHHHHhcccccCCCceEeccCCc-cccccccccCCccH
Confidence 677777 99999999999999999999 9999999998 34444445555431111 1244 334689999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHHHHHH-hcc-----CCeeeEcC-------C------------
Q 002202 694 YSGGLWVAALQAASALAREVGDR-GSEDYFLFKFQKAKVVYEK-LWN-----GSYFNYDN-------S------------ 747 (954)
Q Consensus 694 y~~~lw~aAL~aaa~mA~~LGd~-~~A~~~~~~a~~~k~~~~~-lWn-----G~yy~~D~-------~------------ 747 (954)
|+|+|||.||+++.+|-+.-++. +........+..++.-+.+ +|- ..-|+|.. .
T Consensus 274 eiQaLfy~ALR~~~~~L~~~~~~~~~i~~i~~rl~~L~~h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip~ 353 (550)
T PLN03005 274 EIQALFFMALRSALSMLKPDGDGREFIERIVKRLHALSFHMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIPE 353 (550)
T ss_pred HHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHheecchhhhhhhhhccHhhhchhhhhccccCCccchh
Confidence 99999999999998854332211 1222223333333444555 671 11122210 0
Q ss_pred ---------CCC---C-C---cccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHH---hcc--ccc-------cCCc
Q 002202 748 ---------GSS---Q-S---SSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYN---YNV--LKV-------MGGK 799 (954)
Q Consensus 748 ---------~~~---~-~---~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~---~n~--~~~-------~~g~ 799 (954)
++. + . -..+-+ .+|..+|.++| +++++++.+.++.|.+ .++ +|. .+.+
T Consensus 354 wl~dwlp~~gGY~igNv~pa~~dfRff-slGNllAILs~---Lat~~Qs~aIm~lIe~~w~~Lv~~MPlkIcyPa~e~~e 429 (550)
T PLN03005 354 WVFDFMPLRGGYFVGNVGPAHMDFRWF-ALGNCVSILSS---LATPDQSMAIMDLLEHRWEELVGEMPLKICYPCLEGHE 429 (550)
T ss_pred hhhhhcccCCceeeeecccccCCceeh-hhhhHHHHHhc---cCCHHHHHHHHHHHHHHHHHHhccCCcceeecccCCcc
Confidence 000 0 0 001111 25666778888 5789999999987772 222 111 0223
Q ss_pred ceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCC-CCCCc
Q 002202 800 RGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTD-DQYRS 878 (954)
Q Consensus 800 ~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~-~~~r~ 878 (954)
+.++.|..|.-.| -+||+|-.||-+...+.+.+++.|..+.|.+.++.+.+.. .++ .+ ||-|++. +++
T Consensus 430 Wri~tG~dpKN~P--WSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ral~~ae~rl-~~d----~W--pEyydGktGr~-- 498 (550)
T PLN03005 430 WRIVTGCDPKNTR--WSYHNGGSWPVLLWQLTAACIKTGRPQIARRAVDLIESRL-HRD----CW--PEYYDGKLGRY-- 498 (550)
T ss_pred ceecccCCCCCCC--ccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh-hhc----Cc--hhhcCCCCCcc--
Confidence 4444444332111 1899999999998888899999999999999998887777 433 23 9999884 433
Q ss_pred cCC-ccccHHHHHHHHH
Q 002202 879 LCY-MRPLAIWAMQWAL 894 (954)
Q Consensus 879 ~~Y-~r~~a~Wa~~~Al 894 (954)
.+. .|+-+.|++--.|
T Consensus 499 iGkqar~~QTWSiAG~L 515 (550)
T PLN03005 499 VGKQARKYQTWSIAGYL 515 (550)
T ss_pred cceeccccCchHHHHHH
Confidence 333 4788899865533
No 17
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.28 E-value=1.5e-10 Score=137.69 Aligned_cols=277 Identities=17% Similarity=0.273 Sum_probs=174.4
Q ss_pred chhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCcccc
Q 002202 547 DVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWK 625 (954)
Q Consensus 547 DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~ 625 (954)
|..|-. .+|+. -..+++++|++.|+..|.+ .|.||+--. -||-..
T Consensus 133 DSYfi~-~GLl~s~~~~~a~~mi~Nf~~~i~~-------------------yGfipNg~R--------~Yyl~R------ 178 (512)
T PF01204_consen 133 DSYFII-LGLLASGMYETAKGMIENFLYLIDR-------------------YGFIPNGNR--------TYYLNR------ 178 (512)
T ss_dssp HHHHHH-HHHHHTT-HHHHHHHHHHHHHHHHH-------------------HSS--SBSB--------GGGTT-------
T ss_pred hHHHHH-HHHHHcCCHHHHHHHHHHHHHHHHH-------------------hCcCCCCcc--------HHhccC------
Confidence 666555 88877 7899999999999988732 588888432 234332
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-H-HhhCCCCCCCcc------C-----CCCC-------------
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAY-M-DQFDRDGDGMIE------N-----DGFP------------- 679 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~-l-~~~D~DgDGL~e------~-----~G~~------------- 679 (954)
-=.|.|..||.++|+.|+|.+||++++|.+++=.+| + .+.+..-.|+.. + ...+
T Consensus 179 SQPPlla~mV~~~y~~t~d~~~l~~~lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~~~~prpEsy~eD~~~a~~~ 258 (512)
T PF01204_consen 179 SQPPLLAQMVREYYEATKDKAFLREALPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDPWNSPRPESYREDVETAENF 258 (512)
T ss_dssp --S--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHCHHCT-CCCCCHHHHHHHCH
T ss_pred CCCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCCCCcceeecCCCccCCcccccCCCCCCcchHHHhhHHHHHhh
Confidence 224679999999999999999999999999998885 5 233322223221 1 0000
Q ss_pred -----------------CCCCCC---cccc-c--------------hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHH
Q 002202 680 -----------------DQTYDT---WSVS-G--------------ISAYSGGLWVAALQAASALAREVGDRGSEDYFLF 724 (954)
Q Consensus 680 -----------------dqTyD~---w~~~-G--------------~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~ 724 (954)
-.+||. |-.. | ..+=++++.|...+.+++||+.||+.+.|+.|++
T Consensus 259 ~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a~~lG~~~~a~~~~~ 338 (512)
T PF01204_consen 259 PSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFAELLGDQEKAEEYRQ 338 (512)
T ss_dssp CHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHH
T ss_pred cccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 001221 2111 2 2233699999999999999999999999999999
Q ss_pred HHHHHHHHHHH-hccC---CeeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcc
Q 002202 725 KFQKAKVVYEK-LWNG---SYFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKR 800 (954)
Q Consensus 725 ~a~~~k~~~~~-lWnG---~yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~ 800 (954)
+|++.+++|++ |||. -||.||.......+... ...+++..+| +.+++++.+.++++.+..... +
T Consensus 339 ~A~~~~~aI~~~lWdee~g~~~Dyd~~~~~~~~~~~----~a~f~PL~ag---~a~~~qa~~~~~~~l~~~~~~---~-- 406 (512)
T PF01204_consen 339 RAEERKEAINQYLWDEEDGFYYDYDLRTGKRSPVFS----PANFLPLWAG---IASPEQAERLVARALDYLERS---G-- 406 (512)
T ss_dssp HHHHHHHHHHHHTEETTTTEE--EETTTTEEGG--B----GGGGHHHHTT----S-HHHHHHHHHHHHHHCTTC---C--
T ss_pred HHHHHHHHHHHhCccCCCCeEEeeeCCCCCCccccc----HHHHHHHHHh---hcCHhhhhhHHHHHHHHHHhc---C--
Confidence 99999999999 9984 47888876432222222 2345788999 678999877777777654321 1
Q ss_pred eee-cCcCCCCcccCCCCccC--CccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCC-CCCcCCCCCccccCC
Q 002202 801 GAV-NGMLPDGRVDMSSMQSR--EIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGT-GLGYAFQTPEAWNTD 873 (954)
Q Consensus 801 G~~-~g~~p~G~~~~~s~~s~--evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~-g~G~~~~~PE~~~~~ 873 (954)
++. .+..|....+ +..|=+ ++|+-+++.+..+|.++|..+.|.++++...+...... ..| ..-|-|+..
T Consensus 407 ~l~~~~g~~ts~~~-~~~qWD~Pn~WaPlq~~~i~GL~~yG~~~lA~~la~rwl~~~~~~~~~~g---~m~EKYd~~ 479 (512)
T PF01204_consen 407 LLTFPGGIPTSLYD-TGQQWDGPNVWAPLQWMAIEGLRRYGYRELARRLAQRWLRLNYKVFKRTG---KMFEKYDVE 479 (512)
T ss_dssp SSC-CSECTTCTTT-TTSTTSTTEEEHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCCCCCS---SEBSEEETT
T ss_pred CcccCCCCCCcccc-ccccCCCCCccHhHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhcC---chhccccce
Confidence 110 1111111111 222222 57999999999999999999999999998766553210 022 556767654
No 18
>PLN02567 alpha,alpha-trehalase
Probab=99.27 E-value=1.6e-09 Score=129.11 Aligned_cols=276 Identities=16% Similarity=0.263 Sum_probs=178.0
Q ss_pred chhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCcccc
Q 002202 547 DVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWK 625 (954)
Q Consensus 547 DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~ 625 (954)
|..|-+ .+|+. -..+++++|++.|+..|. ..|.||+.-. .||-..
T Consensus 157 DSy~i~-~GLl~s~~~~~A~~mi~Nf~~~i~-------------------~~GfIPNg~R--------~Yyl~R------ 202 (554)
T PLN02567 157 DSYWVI-RGLLASKMYETAKGVVENLLYLVD-------------------TYGFVPNGAR--------AYYTNR------ 202 (554)
T ss_pred HHHHHH-HHHHhCCCHHHHHHHHHHHHHHHH-------------------HcCcCCCCCc--------ccccCC------
Confidence 666565 88887 467999999999998872 1689997432 244332
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-Hhh------CCCC--CCCccCCCC------------------
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYM-DQF------DRDG--DGMIENDGF------------------ 678 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l-~~~------D~Dg--DGL~e~~G~------------------ 678 (954)
-=.|.+..||.++|..|+|.+||++++|.+++-.+|. ... |.+| .+|..+...
T Consensus 203 SQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~~~~~~v~i~~~~g~~~~L~rY~~~~~~PrpEsyreD~~~a~~ 282 (554)
T PLN02567 203 SQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWTSGRHTVTIRDANGVVHVLSRYYAMWDKPRPESSRIDKEVASK 282 (554)
T ss_pred CCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcCCcceeeecCCCCcCCCcccccCCCCCCCccccccHHHHhc
Confidence 2247799999999999999999999999999988864 321 2112 244443100
Q ss_pred -----------------CCCCCCC---ccccc-----------hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Q 002202 679 -----------------PDQTYDT---WSVSG-----------ISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQ 727 (954)
Q Consensus 679 -----------------~dqTyD~---w~~~G-----------~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~ 727 (954)
...+||. |...+ ..+=++++.+.+-+.+++||+.+|+++.+++|++.|+
T Consensus 283 ~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti~t~~i~pVDLNa~L~~~e~~LA~la~~lG~~~~a~~~~~~A~ 362 (554)
T PLN02567 283 FSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTLRTTSILPVDLNAFLLKMELDIAFFAKLLGDKATAERFLKAAK 362 (554)
T ss_pred CCCchHHHHHHHHHHHHHHcCCCchhhhccccccccccccccccCccHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 0113342 21100 2244699999999999999999999999999999999
Q ss_pred HHHHHHHH-hccCC---eeeEcCCCCCCC---------cccccccchhhHHHHHhCCCCCCCH--HHHHHHHHHHHHhcc
Q 002202 728 KAKVVYEK-LWNGS---YFNYDNSGSSQS---------SSIQADQLAGQWYARACGLLPIVDE--DKARSALKKVYNYNV 792 (954)
Q Consensus 728 ~~k~~~~~-lWnG~---yy~~D~~~~~~~---------~si~adqL~Gqw~a~~~GL~~ild~--e~~~saL~~v~~~n~ 792 (954)
+.+++|++ |||++ ||.||....... ..-...--+..+++.++|+ +++ +++.++++.+.+..+
T Consensus 363 ~~~~aI~~~lWdee~G~y~Dydl~~~~~~~~~~~~~~~~~~~~~~~~s~f~PLw~g~---~~~~~~~a~~v~~~l~~~~l 439 (554)
T PLN02567 363 ARKRAINAVLWNEEMGQWLDYWLPPNGATCQESYTWDAENQNTNVYASNFVPLWCGV---VPPGDAKVEKVVESLKSSGL 439 (554)
T ss_pred HHHHHHHHHhcCcccCeEEeeccccccccccccccccccccccCccHHHHHHHHcCC---CChhhHHHHHHHHHHHhccC
Confidence 99999999 99854 777875432100 0000011135678889995 444 356777776654222
Q ss_pred ccccCCcceeecCcCCCC-cccCCCCccCCccchHHHHHHHHHHHcCChH---HHHHHHHHHHHH---HhcCCCCCcCCC
Q 002202 793 LKVMGGKRGAVNGMLPDG-RVDMSSMQSREIWSGVTYAVAASMIHEDLAD---IGFQTACGIYEA---AWSGTGLGYAFQ 865 (954)
Q Consensus 793 ~~~~~g~~G~~~g~~p~G-~~~~~s~~s~evW~g~~y~lAa~mi~~G~~e---eA~~l~~~i~~~---~~~~~g~G~~~~ 865 (954)
. . ..|++......| ..+.+ ++|+-+++.+..+|.++|..+ .|.++++....+ .|.+. | .
T Consensus 440 ~---~-pgGiptsl~~sg~qWdgP-----n~W~pl~~l~i~GL~~yG~~ea~~lA~~la~rwl~~~~~~~~~t--g---~ 505 (554)
T PLN02567 440 V---L-PAGIATSLRNTGQQWDFP-----NAWAPLQHMIVEGLAASGSKEGKALAEDIARRWLRSNYVAYKKT--G---A 505 (554)
T ss_pred c---c-CCcccCCCCCccccCCCC-----CcCHhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHhc--C---c
Confidence 1 1 245543221111 12211 589999999999999999865 677665533332 12332 2 4
Q ss_pred CCccccCC
Q 002202 866 TPEAWNTD 873 (954)
Q Consensus 866 ~PE~~~~~ 873 (954)
.-|-|+..
T Consensus 506 m~EkYd~~ 513 (554)
T PLN02567 506 MHEKYDAR 513 (554)
T ss_pred eEEeECCC
Confidence 56777764
No 19
>PLN02973 beta-fructofuranosidase
Probab=99.24 E-value=2e-09 Score=122.96 Aligned_cols=253 Identities=15% Similarity=0.175 Sum_probs=158.0
Q ss_pred ccCccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh----hCCCCCCCccCCCCCCCCCCCccccchhHH
Q 002202 619 YDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ----FDRDGDGMIENDGFPDQTYDTWSVSGISAY 694 (954)
Q Consensus 619 ~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~----~D~DgDGL~e~~G~~dqTyD~w~~~G~say 694 (954)
+|+.+| ||+.++.|.+.|||.+|.+ .|.|+++|.++.. ..-|...++.-....+--.|--.+.|...|
T Consensus 224 VDS~LW------WIIllraY~k~TgD~s~~e--~pevQrgi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLe 295 (571)
T PLN02973 224 VDSGFW------WIILLRAYTKSTGDSSLAD--MPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIE 295 (571)
T ss_pred cchhhH------HHHHHHHHHHhccchhhhh--cHHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHH
Confidence 677777 9999999999999999999 9999999999865 444455555532111211233346899999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHHHHHH-hccC-----CeeeEc-----------------C----
Q 002202 695 SGGLWVAALQAASALAREVGDR-GSEDYFLFKFQKAKVVYEK-LWNG-----SYFNYD-----------------N---- 746 (954)
Q Consensus 695 ~~~lw~aAL~aaa~mA~~LGd~-~~A~~~~~~a~~~k~~~~~-lWnG-----~yy~~D-----------------~---- 746 (954)
+|+|||.||+++.+|-+.-.+. +...+....+..++..+.+ +|.- +-|+|. .
T Consensus 296 iQaLfy~ALR~a~~~L~~~~~~~~~i~~i~~rl~~L~~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~w 375 (571)
T PLN02973 296 IQALFFMALRCALLLLKHDGEGKEMVEQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEW 375 (571)
T ss_pred HHHHHHHHHHHHHHhcCccchhHHHHHHHHhhHHHHHHHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchh
Confidence 9999999999998754332211 1222223333444555666 7731 112210 0
Q ss_pred -------CCCC---C-C---cccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHH---hccc--cc-------cCCcc
Q 002202 747 -------SGSS---Q-S---SSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYN---YNVL--KV-------MGGKR 800 (954)
Q Consensus 747 -------~~~~---~-~---~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~---~n~~--~~-------~~g~~ 800 (954)
.++. + . -..+-+ .+|..+|.++| +++++++.+.++.|.+ .++. |. .+.++
T Consensus 376 l~dwlp~~gGY~igNv~Pa~~DfRff-slGNllAILs~---Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EW 451 (571)
T PLN02973 376 VFDFMPPHGGFFIGNVSPARMDFRWF-ALGNCIAILSS---LATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEW 451 (571)
T ss_pred hhhhccCCCceeeeecccccCCcchh-hhhhHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccc
Confidence 0000 0 0 001111 25666778888 4789999988887766 1221 10 12233
Q ss_pred eeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCC-CCCCcc
Q 002202 801 GAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTD-DQYRSL 879 (954)
Q Consensus 801 G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~-~~~r~~ 879 (954)
.++.|..|.-.+ -+||+|-.||-+...+.+.+++.|..+.|.+.++.+.+.. .++ .+ ||-|++. +++ .
T Consensus 452 ri~tG~dpKN~P--WSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ral~~ae~rl-~~d----~W--pEyyDGktGr~--i 520 (571)
T PLN02973 452 RIVTGCDPKNTR--WSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIEVAEARL-HKD----HW--PEYYDGKVGRY--V 520 (571)
T ss_pred eehhccCCCCCc--cceecCCCccHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh-hhc----CC--hhhcCCCCCcC--c
Confidence 333343332111 1899999999998888899999999999999998887777 433 23 9999884 433 2
Q ss_pred CCc-cccHHHHHHHHH
Q 002202 880 CYM-RPLAIWAMQWAL 894 (954)
Q Consensus 880 ~Y~-r~~a~Wa~~~Al 894 (954)
+.. |--+.|++--.|
T Consensus 521 Gkqar~yQTWSiAG~L 536 (571)
T PLN02973 521 GKQSRKNQTWSVAGYL 536 (571)
T ss_pred ceeccccCchHHHHHH
Confidence 222 457788854433
No 20
>PLN02703 beta-fructofuranosidase
Probab=99.23 E-value=2.5e-09 Score=122.78 Aligned_cols=251 Identities=14% Similarity=0.173 Sum_probs=158.0
Q ss_pred cccCccccCCChHHHHHHHHHHHHhCCHHHHHHHH--HHHHHHHHHHHhhCCCCCCCccCCCCCCCCCCC-ccccchhHH
Q 002202 618 LYDTARWKDLNPKFVLQVYRDVVATGDKKFAKAVW--PSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDT-WSVSGISAY 694 (954)
Q Consensus 618 ~~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~w--p~vk~al~~l~~~D~DgDGL~e~~G~~dqTyD~-w~~~G~say 694 (954)
.+|+.+| ||+.++.|.+.|||.+|.++.. +.|+++|+++....-|...++.-.... ...|- -.+.|...|
T Consensus 255 pVDS~LW------WIIllraY~k~TgD~sf~e~~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs-~miDRrMgv~G~PLE 327 (618)
T PLN02703 255 PVDSGLW------WIILLRAYGKCTGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGS-CMIDRRMGIHGHPLE 327 (618)
T ss_pred cccchhH------HHHHHHHHHHhhccHHHhhhhhHHHHHHHHHHHHccCcCCCCceEeccCCC-chhccccCcCCccHH
Confidence 3677777 9999999999999999999988 999999999876555556666531111 12443 346899999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH---HHHHHHHHH-hccC-----Ceee-------------E----cCC-
Q 002202 695 SGGLWVAALQAASALAREVGDRGSEDYFLFKF---QKAKVVYEK-LWNG-----SYFN-------------Y----DNS- 747 (954)
Q Consensus 695 ~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a---~~~k~~~~~-lWnG-----~yy~-------------~----D~~- 747 (954)
+|+|||.||+++.+|-+.-++ ..+..+... ..++..+.+ +|.- +-|+ | |..
T Consensus 328 iQaLfy~ALR~a~~~L~~~~~--~~e~i~~i~~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP 405 (618)
T PLN02703 328 IQALFYSALVCAREMLTPEDG--SVDLIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIP 405 (618)
T ss_pred HHHHHHHHHHHHHHhcCccch--HHHHHHHHhhhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcc
Confidence 999999999999875433221 112222222 223444555 6631 1111 1 100
Q ss_pred ----------CC-------CCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHH---hcc--ccc-------cCC
Q 002202 748 ----------GS-------SQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYN---YNV--LKV-------MGG 798 (954)
Q Consensus 748 ----------~~-------~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~---~n~--~~~-------~~g 798 (954)
++ ...-..+-+ .+|..+|.++| +++++++.+.++.|.+ .++ +|. .+.
T Consensus 406 ~WL~dwlp~~gGYligNv~Pa~mDfRff-sLGNlLAILs~---Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~ 481 (618)
T PLN02703 406 SWLVDFMPNRGGYLIGNLQPAHMDFRFF-TLGNLWSIVSS---LATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGE 481 (618)
T ss_pred hHhhhhccccCceeeeeecccccccchh-hhhhHHHHHhc---CCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCc
Confidence 00 000001112 25677778888 5789999988887766 122 111 123
Q ss_pred cceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCC-CCCC
Q 002202 799 KRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTD-DQYR 877 (954)
Q Consensus 799 ~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~-~~~r 877 (954)
++.++.|..|.-.| -+||+|-.||-+...+.+.+++.|..+.|.+.++.+.+.. .++ .+ ||-|++. +++
T Consensus 482 EWRi~TG~DpKN~P--WSYHNGGsWP~LlWf~~aA~iK~Gr~~lA~ral~~ae~rl-~~d----~W--pEYyDGktGr~- 551 (618)
T PLN02703 482 EWRIITGSDPKNTP--WSYHNGGAWPTLLWQLTVASIKMGRPEIAEKAVELAERRI-SLD----KW--PEYYDTKRARF- 551 (618)
T ss_pred cceeeeCcCCCCCC--ccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh-hhc----cC--hhhccCCCCcC-
Confidence 44444444332111 1899999999998888899999999999999888887776 433 23 9999884 433
Q ss_pred ccCCc-cccHHHHHHH
Q 002202 878 SLCYM-RPLAIWAMQW 892 (954)
Q Consensus 878 ~~~Y~-r~~a~Wa~~~ 892 (954)
.+.. |--+.|++--
T Consensus 552 -iGkqar~yQTWSiAG 566 (618)
T PLN02703 552 -IGKQARLYQTWSIAG 566 (618)
T ss_pred -cceeccccCchHHHH
Confidence 3332 5577888544
No 21
>PRK13272 treA trehalase; Provisional
Probab=99.23 E-value=2.3e-09 Score=126.35 Aligned_cols=270 Identities=17% Similarity=0.244 Sum_probs=183.8
Q ss_pred chhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCcccc
Q 002202 547 DVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWK 625 (954)
Q Consensus 547 DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~ 625 (954)
|..|-. .+|+. -..+++|+|++.|+..|.+ .|.||+--. -||-..
T Consensus 165 DSY~i~-~GLl~s~~~~~a~~mi~Nf~~~i~~-------------------yGfIPNG~R--------~YYl~R------ 210 (542)
T PRK13272 165 DSYFTM-LGLVKSGQTTLSRQMLDNFAYLIDT-------------------YGHIPNGNR--------TYYLSR------ 210 (542)
T ss_pred HHHHHH-HhhhhcCcHHHHHHHHHHHHHHHHH-------------------cCcCcCCch--------hccccC------
Confidence 555454 78877 7899999999999988732 688998432 244443
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHhhC--------------CCCCCCccCC--------------
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAY-MDQFD--------------RDGDGMIEND-------------- 676 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~-l~~~D--------------~DgDGL~e~~-------------- 676 (954)
.-.|.|..||..|+..|||..| ++..|.+++=.+| +.+.. .|+.+|-.+.
T Consensus 211 SQPP~l~~Mv~~~~~~t~d~~~-~~~lp~l~kEy~~Wm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsy~eD 289 (542)
T PRK13272 211 SQPPFFSYMVELQAGVEGDAAY-QRYLPQLQKEYAYWMQGSDDLQPGQAARHVVRLADGSLLNRYWDERDTPRPEAWLHD 289 (542)
T ss_pred CCchhHHHHHHHHHHhcChHHH-HHHHHHHHHHHHHHcCCCCCCCCccccceeEecCCCcchhhhcCCCCCCCChHHHHH
Confidence 2347799999999999999987 6899999987774 53221 2333332220
Q ss_pred -----C---C------------CCCCCCC---ccccc-----------hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHH
Q 002202 677 -----G---F------------PDQTYDT---WSVSG-----------ISAYSGGLWVAALQAASALAREVGDRGSEDYF 722 (954)
Q Consensus 677 -----G---~------------~dqTyD~---w~~~G-----------~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~ 722 (954)
. . ...+||. |-..+ ..+-++++.|.+-+.+++|++.+|+.+.+++|
T Consensus 290 ~~~a~~~~~~~~~~~Y~~l~a~aESGWDfSsRw~~~~~~L~~i~t~~IvpVDLNalL~~~e~~LA~~~~~lG~~~~a~~~ 369 (542)
T PRK13272 290 TRTAAEAKDRPAAEVYRDLRAGAESGWDYSSRWLADGKTLASIRTTAIVPVDLNSLLYHLERTLAQACASSGLAACSQDY 369 (542)
T ss_pred HHHhcCcccCcHHHHHHHHHHHHhcCCCchhhhccccccccccCcccccCccHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 0 0 1234554 32111 23446999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-hccCC--eeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCc
Q 002202 723 LFKFQKAKVVYEK-LWNGS--YFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGK 799 (954)
Q Consensus 723 ~~~a~~~k~~~~~-lWnG~--yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~ 799 (954)
++.|++.+++|++ |||+. ||.||...+...+... ...+++..+| ++++++++++++.+....+. .
T Consensus 370 ~~~A~~r~~aI~~~lWde~G~~~DYD~~~~~~~~~~s----~a~f~PLwag---~a~~~~a~~l~~~l~~~~l~-----~ 437 (542)
T PRK13272 370 AALAQQRKQAIDAHLWNPAGYYADYDWQTRTLSEQVT----AAALYPLFAG---LASDDRAKRTADSVRAQLLR-----P 437 (542)
T ss_pred HHHHHHHHHHHHHhccCcCceEEeeccCCCCcccccc----HHHHHHHHcC---CCCHHHHHHHHHHHHHhccC-----C
Confidence 9999999999999 99843 6778765432222221 3566888899 57888888777766543331 2
Q ss_pred ceeecCcCCCC-cccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHh---cCCCCCcCCCCCccccCC
Q 002202 800 RGAVNGMLPDG-RVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAW---SGTGLGYAFQTPEAWNTD 873 (954)
Q Consensus 800 ~G~~~g~~p~G-~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~---~~~g~G~~~~~PE~~~~~ 873 (954)
.|++......| ..+.+ ++|+-.++.+..++.++|..+.|.++++...+... .+.| ..-|-|+..
T Consensus 438 gGlpTt~~~sgqQWD~P-----N~WaPlq~i~i~GL~~yG~~~lA~~La~rwl~~~~~~~~~~g-----~m~EKYdv~ 505 (542)
T PRK13272 438 GGLATTALKTGQQWDEP-----NGWAPLQWVAVDGLRRYGEDALARTIGERFLAQVQALFAREH-----KLVEKYGLD 505 (542)
T ss_pred CCcCCCCCCccccCCCC-----CccHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcC-----ceeEEeecC
Confidence 45544432222 22222 58999999999999999999999999886555442 3322 455777653
No 22
>PRK13270 treF trehalase; Provisional
Probab=99.16 E-value=7.5e-09 Score=122.39 Aligned_cols=268 Identities=16% Similarity=0.183 Sum_probs=180.7
Q ss_pred chhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCcccc
Q 002202 547 DVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWK 625 (954)
Q Consensus 547 DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~ 625 (954)
|..|-. .+|+. -..+++|+|++.|+..|.+ .|.||+--. -||-..
T Consensus 176 DSYwi~-~GLl~sg~~~~a~~mi~Nf~~li~~-------------------yGfIPNG~R--------~YYl~R------ 221 (549)
T PRK13270 176 DSYFTM-LGLAESGREDLLKCMADNFAWMIEN-------------------YGHIPNGNR--------TYYLSR------ 221 (549)
T ss_pred hHHHHH-HHhhhcCcHHHHHHHHHHHHHHHHH-------------------cCcCcCCch--------hccccC------
Confidence 555454 78776 7789999999999988732 688998432 244433
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHhhC--------------CCCCCCccCC--------------
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAY-MDQFD--------------RDGDGMIEND-------------- 676 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~-l~~~D--------------~DgDGL~e~~-------------- 676 (954)
.-.|.|..||..|++ .|.+++++..|.+++=.+| +.+.. +++.+|-.+.
T Consensus 222 SQPP~l~~Mv~~y~~--~~~~~~~~~lp~l~~E~~fWm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsyreD 299 (549)
T PRK13270 222 SQPPVFALMVELFEE--DGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLED 299 (549)
T ss_pred CCCHhHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHcCCCCccCcccccceeEecCCCCccccccCCCCCCCCchhHHH
Confidence 234668888876655 5789999999999988774 54221 2444554431
Q ss_pred -------CC------------CCCCCCC---ccccc-----------hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Q 002202 677 -------GF------------PDQTYDT---WSVSG-----------ISAYSGGLWVAALQAASALAREVGDRGSEDYFL 723 (954)
Q Consensus 677 -------G~------------~dqTyD~---w~~~G-----------~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~ 723 (954)
+. ...+||. |-..+ ..+=++++.|.+-+.+++||+.+|+.+.+++|+
T Consensus 300 ~~~a~~~~rp~~~~Y~~lra~aESGWDfSsRW~~~~~~L~~i~T~~iipVDLNaiL~~~e~~LA~~a~~lG~~~~a~~~~ 379 (549)
T PRK13270 300 VETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLYKLESAIANISALKGEKETEALFR 379 (549)
T ss_pred HHhhcccCCchHHHHHHHHHHHHcCCCchhhcccCCcccccccccCcchhhHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 00 1223443 21111 234569999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hccCC---eeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCc
Q 002202 724 FKFQKAKVVYEK-LWNGS---YFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGK 799 (954)
Q Consensus 724 ~~a~~~k~~~~~-lWnG~---yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~ 799 (954)
++|++.+++|++ |||++ ||.||...... +. . -...++++.+| +++++++.+.++.+....+. .
T Consensus 380 ~~A~~r~~AI~~~LWnee~G~~~DYD~~~~~~-~~-~---s~a~f~PLwaG---~a~~~qa~~l~~~l~~~ll~-----p 446 (549)
T PRK13270 380 QKASARRDAVNRYLWDDENGIYRDYDWRREQL-AL-F---SAAAIVPLYVG---MANHEQADRLANAVRSRLLT-----P 446 (549)
T ss_pred HHHHHHHHHHHHhccCcccCeEEecccccCcc-cc-c---cHHHHHHHHhC---CCCHHHHHHHHHHHHHhccc-----C
Confidence 999999999999 99854 77787654322 22 2 23567888999 57788887777766543321 1
Q ss_pred ceeecCcCCCC-cccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHH---hcCCCCCcCCCCCccccCC
Q 002202 800 RGAVNGMLPDG-RVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAA---WSGTGLGYAFQTPEAWNTD 873 (954)
Q Consensus 800 ~G~~~g~~p~G-~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~---~~~~g~G~~~~~PE~~~~~ 873 (954)
.|++......| ..+.+ ++|+-.++.+..+|.++|..+.|.++++...+.. |.+.| ...|-|+..
T Consensus 447 GGl~tS~~~sgqQWD~P-----N~WaPlqwmiieGL~ryG~~~lA~~LA~rwl~~~~~~~~~~g-----~m~EKYdv~ 514 (549)
T PRK13270 447 GGILASEYETGEQWDKP-----NGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYQEHH-----KLIEKYHIA 514 (549)
T ss_pred CCcCCCCCCCcccCCCC-----CCCccHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcC-----eeEEEecCC
Confidence 24433322212 22222 5899999999999999999999999988655544 33322 456777764
No 23
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1.4e-08 Score=122.56 Aligned_cols=297 Identities=19% Similarity=0.203 Sum_probs=196.3
Q ss_pred chhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCcc-ccccccccCccc
Q 002202 547 DVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFE-VNAYCLYDTARW 624 (954)
Q Consensus 547 DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~-~~~Y~~~D~~~W 624 (954)
|.. |++.||.. .+.+.++..+..+.+.+...+.-..++.-+| . +++. .|.. ..+++. -..|
T Consensus 289 D~~-~~~~AL~~~G~~~~a~~~f~~l~~~~~~~~~~~~~y~~~g---------~---~~~~--~w~~~~~~~~~--~pv~ 351 (612)
T COG3387 289 DAS-YAALALLAIGYKKEALRFFEFLPDVQTPNGKLYHKYSIDG---------S---DLAE--SWLPVSGYYNS--FPVR 351 (612)
T ss_pred cHH-HHHHHHHHcCCHHHHHHHHHHHHHhhCCCCceeeEEecCC---------C---cccc--ccccccCCCCC--CceE
Confidence 655 66689877 7899999998887777633221011122222 1 1211 1111 012222 3345
Q ss_pred cCCChHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHhhCCCCCCCccCCCCCCCCCCCcccc-chhHHHHHHHHHH
Q 002202 625 KDLNPKFVLQVYRDVVATGDKKFAKAV-WPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDTWSVS-GISAYSGGLWVAA 702 (954)
Q Consensus 625 ~Dl~~~fVl~vyr~~~~TGD~~fL~~~-wp~vk~al~~l~~~D~DgDGL~e~~G~~dqTyD~w~~~-G~say~~~lw~aA 702 (954)
.|.+..-.+++..|++..+|..+..+. +..++.+.+++.+++....+++. ...|.|+.. |..+|..+..|+|
T Consensus 352 ~~~~a~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~~WEer~g~~~yt~~~~~ag 425 (612)
T COG3387 352 IGNTALVQGALDVYGSIMNDIYFYAKYYAIYILPAADYLRRMEKIKANLPT------PDFDLWEERGGHFTYTKATVYAG 425 (612)
T ss_pred EcchhhHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhhcCCCC------CccceecccCCcccchHHHHHHH
Confidence 777777889999999999998887666 56777778887665544445543 346888865 6799999999999
Q ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC--eeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHH
Q 002202 703 LQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS--YFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDK 779 (954)
Q Consensus 703 L~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~--yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~ 779 (954)
|.+|+.||+..|+++.|++|+..++++++.+.+ +++.+ ||..-... ..++.+-+. +++ +...|+-+ .++.+
T Consensus 426 Ld~A~~lA~~~gd~~~a~~~~~~ad~ik~~v~~~~~~~~~~~f~r~~~~-~~~~~vDas-ll~---l~~fg~i~-~~D~~ 499 (612)
T COG3387 426 LDAAADLAEEFGDKGSAEHWRKTADELKEAVLRRGYAEDGGYFVRSLGR-KPDDTVDAS-LLG---LVLFGFIP-PDDPR 499 (612)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhcccccCCeeehhcCC-CccccccHH-Hhh---ccccCccC-CCCHH
Confidence 999999999999999999999999999999999 88644 56521111 012223222 111 12344432 45668
Q ss_pred HHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCC
Q 002202 780 ARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTG 859 (954)
Q Consensus 780 ~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g 859 (954)
+.+++++|.+.+..+. .+-..+.+ ..-+| ..+.+.+|+.++.+++..++..|..++|.++++++.... +.
T Consensus 500 ~~~t~~~I~~~L~~~~-~gi~RY~~-~~~d~-----~~~~~~~w~i~t~Wl~~~~~~~g~~~~a~~ll~~l~~~a-~~-- 569 (612)
T COG3387 500 ILATVEAIERELLVDG-GGIRRYNN-EYDDG-----LGGDNGPWIITTLWLSEYYLALGRLDEAKKLLEWLLAFA-SP-- 569 (612)
T ss_pred HHHHHHHHHHHHhhcC-CcEEcCcc-ccccc-----cCCCCCcceeehhHHHHHHHHccchHHHHHHHHHHHHhc-CC--
Confidence 9999999999887531 11111111 00121 112335999999999999999999999999999999887 55
Q ss_pred CCcCCCCCccccCCC-CCCccCCccccHHHH
Q 002202 860 LGYAFQTPEAWNTDD-QYRSLCYMRPLAIWA 889 (954)
Q Consensus 860 ~G~~~~~PE~~~~~~-~~r~~~Y~r~~a~Wa 889 (954)
.| -+||+++... ++ ....+.+|+
T Consensus 570 ~g---ll~EQv~~~~G~~----~g~~PlawS 593 (612)
T COG3387 570 LG---LLPEQVDDGSGEP----LGAFPLAWS 593 (612)
T ss_pred CC---CcchhhcCCCCcc----CCCCcchhh
Confidence 34 6899998742 32 233556777
No 24
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=98.99 E-value=1.2e-07 Score=106.74 Aligned_cols=250 Identities=16% Similarity=0.222 Sum_probs=155.5
Q ss_pred ccCccccCCChHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHH--hhCCCCCCCccCCCC-C-CCCCCCccccchh
Q 002202 619 YDTARWKDLNPKFVLQVYRDVVATGDKKFAKA--VWPSVYVAMAYMD--QFDRDGDGMIENDGF-P-DQTYDTWSVSGIS 692 (954)
Q Consensus 619 ~D~~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~--~wp~vk~al~~l~--~~D~DgDGL~e~~G~-~-dqTyD~w~~~G~s 692 (954)
+|..+| +|+.+..|-+.|||.+|.++ +-.-++.+|+-.. .||.-..=|+- +|. . |-.+ .+.|..
T Consensus 115 VDs~~W------WiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL~~~Fd~~PtLlvp-Dg~~MiDRrM---gv~G~P 184 (436)
T PF12899_consen 115 VDSGLW------WIILLRAYVKATGDYSLAESPEVQRGIRLILDLCLADGFDMFPTLLVP-DGACMIDRRM---GVYGHP 184 (436)
T ss_pred cccccH------HHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHcccccCCCceEEec-CCceeecccc---cccCCc
Confidence 677788 99999999999999999986 4566666666543 36632111111 110 0 1122 247899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CcchHHHHHHHHHHHHHHHHH-hcc-----CCeeeEcCC-------C--CCCCc---
Q 002202 693 AYSGGLWVAALQAASALAREVG-DRGSEDYFLFKFQKAKVVYEK-LWN-----GSYFNYDNS-------G--SSQSS--- 753 (954)
Q Consensus 693 ay~~~lw~aAL~aaa~mA~~LG-d~~~A~~~~~~a~~~k~~~~~-lWn-----G~yy~~D~~-------~--~~~~~--- 753 (954)
.++++|.|.||+++.+|-+.-. .++..++-.+++..++.-+.+ +|- .+-|+|-.. + +...+
T Consensus 185 lEiQ~Lf~~aLr~a~~ll~~~~~~~~~~~~i~~rl~~L~~h~r~~yWld~~~ln~iyr~~teey~~~a~N~fNi~p~~ip 264 (436)
T PF12899_consen 185 LEIQALFYMALRCARELLKPDEEGKDLIERIDKRLHALSFHIREYYWLDLKRLNEIYRYKTEEYGHTAVNKFNIYPDSIP 264 (436)
T ss_pred chHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccHhhhhhhhhhcccCCcccch
Confidence 9999999999999998866432 233444555666666777888 883 122333100 0 00000
Q ss_pred -----------------------ccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHh--ccc---cc-------cCC
Q 002202 754 -----------------------SIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNY--NVL---KV-------MGG 798 (954)
Q Consensus 754 -----------------------si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~--n~~---~~-------~~g 798 (954)
..+-+ .+|.-+|.++| +++++++++.++.|.+. ++. |. .+.
T Consensus 265 ~wl~dwlp~~gGY~ignv~P~~~dfRff-~lGNlLAiLsg---Lat~~qa~~I~~lIe~~~~~L~g~mPlki~yPale~~ 340 (436)
T PF12899_consen 265 DWLFDWLPEKGGYFIGNVSPARMDFRFF-SLGNLLAILSG---LATPEQAEAIMDLIEERWEDLVGPMPLKICYPALEGE 340 (436)
T ss_pred HHHHHhcccCCceeEeeccccccceeeh-hhhhHHHHHhc---CCCHHHHHHHHHHHHHHHhhhccccchhhccCCCCCC
Confidence 01112 25666778888 57899999999888664 221 10 011
Q ss_pred cceeecCcCCCCcccC-C-CCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCC-CC
Q 002202 799 KRGAVNGMLPDGRVDM-S-SMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTD-DQ 875 (954)
Q Consensus 799 ~~G~~~g~~p~G~~~~-~-s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~-~~ 875 (954)
++..+.+. .+++ + +||+|-.||-+...+.+++++.|..+.|.+.+....+.. .+ .+-||-|++. ++
T Consensus 341 eWri~tg~----dpKN~PwsYHNGG~WP~LlW~~~aA~ik~gr~~lA~~al~~a~~rL-~~------dewpEyydGktGr 409 (436)
T PF12899_consen 341 EWRIYTGC----DPKNTPWSYHNGGSWPVLLWFLTAALIKMGRPELAERALEAAENRL-SK------DEWPEYYDGKTGR 409 (436)
T ss_pred CCccccCc----CcCccccccccCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh-cc------cCCcccccCCCCC
Confidence 22222222 2333 2 899999999999888999999999998888777755555 33 2358888774 32
Q ss_pred CCccCC-ccccHHHHHHHHHh
Q 002202 876 YRSLCY-MRPLAIWAMQWALT 895 (954)
Q Consensus 876 ~r~~~Y-~r~~a~Wa~~~Al~ 895 (954)
+ .+. .|.-+.|++--.|.
T Consensus 410 p--~Gkqar~~QTWSaAgyLl 428 (436)
T PF12899_consen 410 P--MGKQARKYQTWSAAGYLL 428 (436)
T ss_pred c--ccccccccCchHHHHHHH
Confidence 2 333 25678999766554
No 25
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=98.61 E-value=4.5e-06 Score=103.94 Aligned_cols=268 Identities=15% Similarity=0.191 Sum_probs=155.3
Q ss_pred HHHhhhChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCC--CCCCCCcccc-ccccccCccccCCC-h
Q 002202 554 FALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDI--GICDPWFEVN-AYCLYDTARWKDLN-P 629 (954)
Q Consensus 554 ~al~~L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdl--G~~~Pw~~~~-~Y~~~D~~~W~Dl~-~ 629 (954)
+.+....|+|++.++....+.+ .+| |-||++. |.+. =.++| .+..+.+. ..| |
T Consensus 408 L~i~~wD~dls~eil~sWl~lm-~~d------------------GWIpREQILG~EA-rskVP~eF~vQ~p~---~ANPP 464 (801)
T PF03200_consen 408 LLISRWDPDLSLEILASWLDLM-NED------------------GWIPREQILGEEA-RSKVPAEFQVQYPS---NANPP 464 (801)
T ss_pred hhHHHhCHHHHHHHHHHHHHhc-ccc------------------CCchhhhhcCHhH-HhcCCHHHHcCCCC---CCCCc
Confidence 5566678999999999887765 232 4444432 2110 00111 23333332 334 4
Q ss_pred HHHHHHHHHHH---Hh--------CCHHHHHHHHHHHHHHHHHHHh-hCCCCCCCccCCCCCCC------------CCCC
Q 002202 630 KFVLQVYRDVV---AT--------GDKKFAKAVWPSVYVAMAYMDQ-FDRDGDGMIENDGFPDQ------------TYDT 685 (954)
Q Consensus 630 ~fVl~vyr~~~---~T--------GD~~fL~~~wp~vk~al~~l~~-~D~DgDGL~e~~G~~dq------------TyD~ 685 (954)
.+++++-+... .. .+.+||+++||.+++..+|..+ ..-+-.|--...|.-.. +.|+
T Consensus 465 Tl~l~l~~ll~~~~~~~~~~~~~~~~~~~l~~~yp~L~~~~~wf~~tQ~G~~~~~yrWrGr~~~~~~~lnp~~L~SGlDD 544 (801)
T PF03200_consen 465 TLFLALEKLLDRLKAEKKSEDNSEEDLEFLRRIYPRLKRWYNWFNTTQAGDIPGSYRWRGRDPTTDRELNPHTLTSGLDD 544 (801)
T ss_pred cHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceeEcCCCCCccccccccCcCCCCCC
Confidence 56666665432 22 3679999999999999999743 22111122222232221 3555
Q ss_pred ccc--cc----hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC---eeeEcCCCC------
Q 002202 686 WSV--SG----ISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS---YFNYDNSGS------ 749 (954)
Q Consensus 686 w~~--~G----~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~---yy~~D~~~~------ 749 (954)
.+. .+ .++-..+...-+-+.|++||..||.++.+.+|.+.++.+++.+++ .||++ ||.+.....
T Consensus 545 YPRa~~p~~~e~hvDl~sWMa~~a~~M~~IA~~L~~~d~~~ef~~~~~~i~~~l~~~hWdeedgfYyD~~~~~~~v~l~~ 624 (801)
T PF03200_consen 545 YPRASHPSDSERHVDLTSWMAFFALNMARIALELGKEDDAYEFFEHFEYISDALNKLHWDEEDGFYYDVGLHPDAVRLEW 624 (801)
T ss_pred CCCCCCCCccceechHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCCcccCceeeeccccccceecc
Confidence 432 11 123346667778899999999999999888899999999999999 99854 555422110
Q ss_pred ------------------CCCcccccccchhhH--HHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCC
Q 002202 750 ------------------SQSSSIQADQLAGQW--YARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPD 809 (954)
Q Consensus 750 ------------------~~~~si~adqL~Gqw--~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~ 809 (954)
......+..+ .|.+ ++.++||-+ .+.++.++.|+.+.+..- + -..+|++..+..+
T Consensus 625 ~~~~~~~~~~~~~~r~~~~~~~~~~v~~-~Gyvsl~Plll~ll~-~ds~~L~~~L~~l~D~~e--f-~s~yGirSLSk~~ 699 (801)
T PF03200_consen 625 KEVLENGQFRRELVRVVRGEPQLQLVCH-FGYVSLFPLLLGLLP-PDSERLERLLERLLDEDE--F-WSPYGIRSLSKSD 699 (801)
T ss_pred cccccccccchhheecccCCccccceee-ecccCCCchhhccCC-CCHHHHHHHHHHhcChhh--c-cCCCCCccccCCC
Confidence 0000001111 2221 234555321 234678888888874321 1 2347876654422
Q ss_pred ------CcccCCCCccCCccchHHHHHHHHHHHcCC-----hHHHHHHHHH
Q 002202 810 ------GRVDMSSMQSREIWSGVTYAVAASMIHEDL-----ADIGFQTACG 849 (954)
Q Consensus 810 ------G~~~~~s~~s~evW~g~~y~lAa~mi~~G~-----~eeA~~l~~~ 849 (954)
+.-..++|=.|.||.-+||.+..+|.++|. .++|.++...
T Consensus 700 ~~y~~~~~e~d~~YWRGpIW~~~NyL~i~aL~~y~~~~g~~~~~a~~~y~~ 750 (801)
T PF03200_consen 700 PFYGPGENEHDPSYWRGPIWIPINYLLIEALRRYGYYYGPYQERAKEIYKE 750 (801)
T ss_pred ccccccCCccCCCcccCccchhhHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 111123577789999999999999999984 4556555443
No 26
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.16 E-value=7.2e-05 Score=88.60 Aligned_cols=273 Identities=17% Similarity=0.231 Sum_probs=167.7
Q ss_pred HHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCccccCCChHHH
Q 002202 554 FALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWKDLNPKFV 632 (954)
Q Consensus 554 ~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W~Dl~~~fV 632 (954)
.+|+. ---+.+|+|++.|...|.. .|.||+.-. -+|-.. -=.|.+-
T Consensus 196 ~GLl~S~m~~takGmieNf~~lV~~-------------------yG~ipNg~R--------~YYl~R------SQPPllt 242 (600)
T KOG0602|consen 196 KGLLASQMFDTAKGMIENFISLVDT-------------------YGFIPNGGR--------VYYLNR------SQPPLLT 242 (600)
T ss_pred HhHHhhcccHHHHHHHHHHHHHHHh-------------------cCcccCCCe--------eeeecc------CCCchhh
Confidence 66666 4578899999999887621 588888432 233333 3356789
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHH-HHH--hhCCCCCC--CccC----CCC-------------------------
Q 002202 633 LQVYRDVVATGDKKFAKAVWPSVYVAMA-YMD--QFDRDGDG--MIEN----DGF------------------------- 678 (954)
Q Consensus 633 l~vyr~~~~TGD~~fL~~~wp~vk~al~-~l~--~~D~DgDG--L~e~----~G~------------------------- 678 (954)
.|++++|+.|+|.+|+++..|++.+=++ |.. +-|.-.+| |-.+ .|.
T Consensus 243 ~Mv~~~y~~t~~~~~~~~~l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~~~~~prPEsy~~d~e~~e~~~t~~~~~~~~ 322 (600)
T KOG0602|consen 243 GMVYEYYEATNDEQFLKRALPTLIKEYEFWTNNRTEDVKDEGKVLSRYRVMGSGPRPESYREDFETAEHLKTEKEKQQLY 322 (600)
T ss_pred hhHHHhhhccCcHHHHHHHHHHHhhheecccCCCccccccCCceeEEEeccCCCCCCcchHHHHHHHhcccchHHHHHHH
Confidence 9999999999999999999999998777 553 23332233 2211 111
Q ss_pred ------CCCCCCC---cc-ccc----------hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hc
Q 002202 679 ------PDQTYDT---WS-VSG----------ISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LW 737 (954)
Q Consensus 679 ------~dqTyD~---w~-~~G----------~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lW 737 (954)
+.+++|. |- +.| +.+=+++++...+..|+.+....|+.+.++.|++++++.+.++++ ||
T Consensus 323 ~~l~~~aesg~DfSsrw~~~~~t~~~~~t~~~vpvDLN~~~~~~~~i~~y~~~~~Gd~~~s~~~~~k~~~r~~~i~~vlW 402 (600)
T KOG0602|consen 323 QDLAAAAESGWDFSSRWFAVNGTLSSIGTTDLVPVDLNLLYKWNADIMKYFYVVDGDPKDSAQFEKKSEQRRAAIQEVLW 402 (600)
T ss_pred HHHhhcCcccchhHHHhhccCCcccccccccccccchHHHHHhhHHHHhhhcccCCChhHHHHHHHHHHHHHHHHHHhcc
Confidence 1233442 11 122 111137788888899999999999999999999999999999999 99
Q ss_pred cC---CeeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHH-HHHHHHHHHHHhccccccCCcceeecCcCCCCccc
Q 002202 738 NG---SYFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDED-KARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVD 813 (954)
Q Consensus 738 nG---~yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e-~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~ 813 (954)
|. -||.||.....+.....+. ..++..+|.-+..+++ .+.+++..+.+.-+..+ ..|++.+..
T Consensus 403 de~~g~w~DYd~~~~~~~~~~~~s----n~~Pl~~~~~~~~~~~~~~~~v~~~le~~g~~~~---p~giP~Sl~------ 469 (600)
T KOG0602|consen 403 DEEDGAWFDYDLELKKHNTYFYAS----NFAPLWAGCYPAPDDDKSVDKVLDYLEKSGALTF---PGGIPTSLS------ 469 (600)
T ss_pred CCCCCcceeccccccccCCCcCch----hhhhhhccCCCcccccchHHHHHHHHHHcCCcCC---CCCCcccCC------
Confidence 84 4888987643222222222 2245567754444444 45555554433221111 111222111
Q ss_pred CCCCccC--CccchHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCCC
Q 002202 814 MSSMQSR--EIWSGVTYAVAASMIHED---LADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDD 874 (954)
Q Consensus 814 ~~s~~s~--evW~g~~y~lAa~mi~~G---~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~ 874 (954)
+++-|=+ ++|+-....+-.++++.| +.+.|++++..-....+.- ..+ ....+|-++...
T Consensus 470 ~s~eQWD~Pn~WaP~q~m~~~gl~~~~~~~~~~~A~kla~~wl~~~~~~-~~~-~g~~~EKY~vt~ 533 (600)
T KOG0602|consen 470 NSGEQWDFPNGWAPNQHMAIEGLRRAGNQELQEVALKLAQRWLETNFAV-FVD-SGGMFEKYDVTR 533 (600)
T ss_pred CchhhccCCCCCCcceehhhhhhhhcCCHHHHHHHHHHHHHHHHHhhhh-hcc-cCceeEeecccc
Confidence 1211111 688877777788999999 7788888887543333221 011 125777777654
No 27
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.15 E-value=0.00041 Score=80.85 Aligned_cols=257 Identities=18% Similarity=0.236 Sum_probs=171.6
Q ss_pred cchhhHHHHHHhh-hChHHHHHHHHHHHHHhhccCCCCceecccccccccccCCCCCCCCCCCCCCccccccccccCccc
Q 002202 546 YDVHFYSSFALIM-LFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARW 624 (954)
Q Consensus 546 ~DV~fYas~al~~-L~PeL~rs~l~~fa~~~~~~D~~~~k~~~~G~~~~rk~~G~iPhdlG~~~Pw~~~~~Y~~~D~~~W 624 (954)
+|..|-. ++|+. -.-+++++|+..|+..+.+ .|.||+-..+ +|-+.
T Consensus 175 WDsYf~~-lGL~esgr~d~a~~Mv~nF~~~Ie~-------------------yG~IpNgnRt--------YyLsR----- 221 (558)
T COG1626 175 WDSYFTM-LGLAESGRWDLAKGMVDNFAYEIET-------------------YGHIPNGNRT--------YYLSR----- 221 (558)
T ss_pred HHHHHHH-HHHhhcCcHHHHHHHHHHHHHHHHH-------------------hccccCCcee--------eEeec-----
Confidence 3666554 77776 6789999999999987732 4777874321 33332
Q ss_pred cCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HH------------hhCCCCCCCc---cCC-----CCC----
Q 002202 625 KDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAY-MD------------QFDRDGDGMI---END-----GFP---- 679 (954)
Q Consensus 625 ~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~-l~------------~~D~DgDGL~---e~~-----G~~---- 679 (954)
--.|-|-+|+-.+++-.| .+++++..|.+++..++ +. +.-+.+||.+ +++ ..+
T Consensus 222 -SQPPff~~Mv~~~~~~~g-~~~~~r~l~~~~key~~w~~~~~~l~~~~~~~~~~~~~dG~~pe~ln~y~dd~~tpr~Es 299 (558)
T COG1626 222 -SQPPFFALMVELVAEHEG-VAALKRYLPALIKEYAYWMDGVPSLQPKQGYSRVVTLGDGSPPEVLNRYWDDRDTPRQES 299 (558)
T ss_pred -CCCCcHHHHHHHHHHhhc-HHHHHHHHHHHHHHHHHHhccCcccCccccceeEEecCCCCchhhhhhhhcccCCccchh
Confidence 223447888888888888 67788889988887765 32 1225577884 220 000
Q ss_pred ---------------------------CCCCCC---cc-c----------cchhHHHHHHHHHHHHHHHHHHHHcCCcch
Q 002202 680 ---------------------------DQTYDT---WS-V----------SGISAYSGGLWVAALQAASALAREVGDRGS 718 (954)
Q Consensus 680 ---------------------------dqTyD~---w~-~----------~G~say~~~lw~aAL~aaa~mA~~LGd~~~ 718 (954)
..++|. |. + .-..++.+++.|.-.+..+.+.++.|+.+.
T Consensus 300 y~~t~~~a~~~~~r~~~eiy~~dRA~reSGwD~ssRw~g~~~~LasIrt~~~~p~dlna~~y~~e~~~~~~~~~~~~~~~ 379 (558)
T COG1626 300 YHETIATAKHNPERPLDEIYRDDRAGRESGWDFSSRWLGVPAPLASIRTTSILPVDLNALLYKLEEIIANISAIKGDKET 379 (558)
T ss_pred hhhhHHHhhcCcCCChHhhhcchhhhHhccCcccccccCCCccccceeccccchhhhhhHHHHHHHHHHHHHHhcCchHH
Confidence 111221 10 0 013356799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-hccCC---eeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhcccc
Q 002202 719 EDYFLFKFQKAKVVYEK-LWNGS---YFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLK 794 (954)
Q Consensus 719 A~~~~~~a~~~k~~~~~-lWnG~---yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~ 794 (954)
++.|+++++.=+++|++ ||+.+ |+.||-.......-.. +.-.|+...| +.+++|+++.++.......++
T Consensus 380 ~e~~~~~A~~R~~aI~~ylW~~e~G~~~DYd~k~~~~~~y~~----a~~~~plw~G---~a~~era~~~a~~~~~~l~~p 452 (558)
T COG1626 380 AERYQRKAEARRCAINKYLWDDEAGQYNDYDWKLKKRRAYLS----AAALWPLWVG---LATPERAQRLADAALSMLEQP 452 (558)
T ss_pred HHHHHHHHHHHHHHHHHHccccccceeehhhhhccccccccc----hhhhhhccCC---CCCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999 99753 4557754321111111 1223556667 468999998888776644432
Q ss_pred ccCCcceeecCcCCCC-cccCCCCccCCccchHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 002202 795 VMGGKRGAVNGMLPDG-RVDMSSMQSREIWSGVTYAVAASMIHEDLADIGFQTACGIYEAA 854 (954)
Q Consensus 795 ~~~g~~G~~~g~~p~G-~~~~~s~~s~evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~ 854 (954)
.|+..+....| ..+.+ +.|.-+..+...++.++|....|.+++++....+
T Consensus 453 -----GGl~ast~~s~~QWD~P-----NgWaPlq~ia~~gL~ryG~~~la~~ia~rwL~~v 503 (558)
T COG1626 453 -----GGLSASTPRSGQQWDYP-----NGWAPLQWIATQGLKRYGYDILADDIARRWLTNV 503 (558)
T ss_pred -----CceecccccccccccCC-----CCCccHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 46666654444 23433 6798888888889999999999999999765544
No 28
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=97.89 E-value=0.00026 Score=83.59 Aligned_cols=191 Identities=20% Similarity=0.315 Sum_probs=120.9
Q ss_pred cCCChHHHHHHHHHHHHhCCHHHHHHHHHH--HHHHHHHHHh-hCCCCCCCccCCCCCCCCCCCccc-cchhHH--HHHH
Q 002202 625 KDLNPKFVLQVYRDVVATGDKKFAKAVWPS--VYVAMAYMDQ-FDRDGDGMIENDGFPDQTYDTWSV-SGISAY--SGGL 698 (954)
Q Consensus 625 ~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~--vk~al~~l~~-~D~DgDGL~e~~G~~dqTyD~w~~-~G~say--~~~l 698 (954)
.|....++++++++. .....+...+|+. |+..++|+.+ |+. ..+|.|+. .|.+.| ....
T Consensus 125 ~D~~gl~l~~l~~~~--~~g~~~~~~~~~~~~I~~~~~yi~~~w~~-------------pd~dlWEe~~g~~~f~~S~~~ 189 (448)
T PF00723_consen 125 NDGPGLRLLALWQYI--DSGLQIIYTYWEVSFIKNDLDYIERNWRE-------------PDFDLWEERNGIHFFTASSAM 189 (448)
T ss_dssp THHHHHHHHHHHHHH--HTTHHHHHTHHHHHTHHHHHHHHHHHTTS-------------BEE-TTSS-EEEEHH--HHHH
T ss_pred CCchHHHHHHHHHHH--HcCCCcccccchhHHHHHHHHHHHHHcCC-------------cCCccccccCCCCccchhHHH
Confidence 588888999999993 3338888899999 9999999865 553 36899984 688888 8888
Q ss_pred HHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH------HH-hccCC-eee-EcCC----CC---CCCcccccccchh
Q 002202 699 WVAALQAASALAREVGDRGSEDYFLFKFQKAKVVY------EK-LWNGS-YFN-YDNS----GS---SQSSSIQADQLAG 762 (954)
Q Consensus 699 w~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~------~~-lWnG~-yy~-~D~~----~~---~~~~si~adqL~G 762 (954)
.++||.+++++|+.+|++..+++|++.++++++.+ .+ +|+.. +|. .+.. .. ...+.+.+.-|
T Consensus 190 ~~~AL~~a~~~a~~~g~~~~~~~~~~~a~~i~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~sll-- 267 (448)
T PF00723_consen 190 QWAALLRAANLAELFGDPGDAERWRETADEIRERLEGWYGLERGFWPEFGYFIRIYGSFSGNSEQVQGYRSGLDASLL-- 267 (448)
T ss_dssp HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHEESGGGBTTSSBESEESSSEETTTCCEEEGSGS-BTHHH--
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhhhhccccccccCCCCeEEEecCCccccchhhhcchhhHHHHHH--
Confidence 99999999999999999999999999999999999 35 78654 333 3322 00 01122222111
Q ss_pred hHHHHHhCCCCCCCH----------HHHHHHHHHHHHhcccccc--CCcceeecCcCCCCcccCCCCccCCccchHHHHH
Q 002202 763 QWYARACGLLPIVDE----------DKARSALKKVYNYNVLKVM--GGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAV 830 (954)
Q Consensus 763 qw~a~~~GL~~ild~----------e~~~saL~~v~~~n~~~~~--~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~l 830 (954)
.+...|+-+ .+. .++..+++.|.+.+-..+. .|.....++=+|...-+...--.|++|...+++.
T Consensus 268 --l~~~~~~~~-~~d~~~~~~~p~sp~~~~T~~~i~~~l~~~~~in~g~~~~~~~RY~~D~y~~~~~~~G~pw~l~T~w~ 344 (448)
T PF00723_consen 268 --LLPLFGFVP-PDDVDDERFQPHSPRVLNTLKAIEEELRVDYPINPGDIDPGIGRYPEDVYDDGLGSEGNPWFLCTFWA 344 (448)
T ss_dssp --HHHHTTSST-TT-S-TTTTTTTSHHHHHHHHHHHHCTTTTEGGGTT-STTSEBSCTT--GGSSSBTGS-CBHHHHHHH
T ss_pred --HHHHccCCC-cccccccccccccHHHHHHHHHHHHHHHHhcCCCccccCccceecccccccCccCCCCccceeeechh
Confidence 344566532 344 7899999988886543211 0100000111111000000112679999889996
Q ss_pred HHHHH
Q 002202 831 AASMI 835 (954)
Q Consensus 831 Aa~mi 835 (954)
|..++
T Consensus 345 ae~l~ 349 (448)
T PF00723_consen 345 AEALY 349 (448)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 29
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=97.45 E-value=0.0013 Score=75.70 Aligned_cols=234 Identities=20% Similarity=0.241 Sum_probs=126.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHH-----hhCCCCCCCcc-C-----------------CCCCCC--C
Q 002202 629 PKFVLQVYRDVVATGDKKFAKAVW-PSVYVAMAYMD-----QFDRDGDGMIE-N-----------------DGFPDQ--T 682 (954)
Q Consensus 629 ~~fVl~vyr~~~~TGD~~fL~~~w-p~vk~al~~l~-----~~D~DgDGL~e-~-----------------~G~~dq--T 682 (954)
.-||.+.|.||+.|||.+|+.+-| .+++.+++=++ .++.|+++... + .|.+-. +
T Consensus 131 ~~~l~La~~y~~~Tgd~~~f~~~~~~A~~~il~~~~~eq~~t~~~~~~~~~s~Y~F~R~~~~~tdtl~~~G~G~pv~~tG 210 (424)
T PF06824_consen 131 CYFLQLAYQYWKATGDTSFFDEDWLRAVRLILDTWRTEQRPTYDEDHEGLPSPYRFQRPTCRPTDTLPNDGRGNPVAYTG 210 (424)
T ss_dssp HHHHHHHHHHHHHH--GTTSSHHHHHHHHHHHHHHHHTTG------SSSCS-S---BESBSSGGGS-HHHHT-S----SS
T ss_pred hHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHhhhccccccCCCcceeeccCCCCCccccCCCcCCcCCCCC
Confidence 448889999999999999987755 56777776432 24555544211 1 121110 0
Q ss_pred --------CCCccccchhHHHHHHHHHHHHHHHHHHHHcCCcc---hHHHHHHHHHHHHHHHHH-hc-c----CCeeeE-
Q 002202 683 --------YDTWSVSGISAYSGGLWVAALQAASALAREVGDRG---SEDYFLFKFQKAKVVYEK-LW-N----GSYFNY- 744 (954)
Q Consensus 683 --------yD~w~~~G~say~~~lw~aAL~aaa~mA~~LGd~~---~A~~~~~~a~~~k~~~~~-lW-n----G~yy~~- 744 (954)
=|+-..+|-...-+.+...+|+.+++|++.++..+ +|++.+++++++++.+.+ .- + |+-|.|
T Consensus 211 li~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~~~~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYE 290 (424)
T PF06824_consen 211 LIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRALGWDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYE 290 (424)
T ss_dssp S-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHHTT-THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SE
T ss_pred ceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEE
Confidence 13335567777789999999999999999888665 899999999999999999 43 3 345776
Q ss_pred -cCCCCC--CCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhc-cccccCCcceeecCcCCCCcccCCCCccC
Q 002202 745 -DNSGSS--QSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYN-VLKVMGGKRGAVNGMLPDGRVDMSSMQSR 820 (954)
Q Consensus 745 -D~~~~~--~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n-~~~~~~g~~G~~~g~~p~G~~~~~s~~s~ 820 (954)
|..|+. -++. ....|+. +-.+|.-. .+++--+.+-+.|.... ..-|..|...--. | +.|.+
T Consensus 291 VDG~G~~~~mDDA-NvPSLLS---lPylGf~~-~~DpvYqnTR~~iLS~~~NPyy~~G~~~~Gi-----G-----sPHt~ 355 (424)
T PF06824_consen 291 VDGFGNHLLMDDA-NVPSLLS---LPYLGFCS-KDDPVYQNTRRFILSPEGNPYYFSGKAASGI-----G-----SPHTP 355 (424)
T ss_dssp E-SSS-EE----S-SSS-STT---HHHHTSS--TT-HHHHHHHHHHTSTT-STTEEEESSEEEE------------TTT-
T ss_pred ecCCCCccccCCC-CCchHhh---hhhcCCCC-CCcHHHHHHHHHHhCCCCCCccccCCCcCCC-----C-----CCCCC
Confidence 444321 1111 1222331 22455422 34555566666666644 2112222211111 2 33443
Q ss_pred --CccchHHHHHHHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCCCCCCccCCccccHHHH
Q 002202 821 --EIWSGVTYAVAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWA 889 (954)
Q Consensus 821 --evW~g~~y~lAa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~Wa 889 (954)
.+||. +++...+-....+|..++++.+.++. .|.| -.-|.|+.+. +..|-|+-=+|+
T Consensus 356 ~~~iWPm---sl~~~~lTs~d~~Ei~~~L~~L~~t~---~gtG---lmHES~d~~~---~~~~TR~WFaWa 414 (424)
T PF06824_consen 356 PGYIWPM---SLAMQGLTSDDDEEIRECLRMLKRTT---AGTG---LMHESFDVDD---PSKFTRPWFAWA 414 (424)
T ss_dssp TTEEEHH---HHHHHHHT-S-HHHHHHHHHHHHHTS---TTSS---S--SEEETTE---EEEEE-S-BHHH
T ss_pred CCCccHH---HHHHHHhcCCCHHHHHHHHHHHHhcc---CCCC---ceeccccCCC---CcccCcHHHHHH
Confidence 58982 12222222245667777888777765 4455 5678888764 678889888886
No 30
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=96.80 E-value=0.06 Score=66.02 Aligned_cols=186 Identities=16% Similarity=0.083 Sum_probs=105.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHc------------CCcchHHHHHHHHHHHHHHHHH-hcc-CCeee-----------
Q 002202 689 SGISAYSGGLWVAALQAASALAREV------------GDRGSEDYFLFKFQKAKVVYEK-LWN-GSYFN----------- 743 (954)
Q Consensus 689 ~G~say~~~lw~aAL~aaa~mA~~L------------Gd~~~A~~~~~~a~~~k~~~~~-lWn-G~yy~----------- 743 (954)
.|..+.++||-++||+.+.++++.- |+. ..-.|.+.++++++.|++ |+- ++=+.
T Consensus 1264 DGsAVEi~GL~~salrfl~elkek~ifpy~~Ve~k~~g~~-~k~s~~eW~qkiqdNFeK~ffV~ed~s~~~~~~~~~vnk 1342 (1521)
T KOG3625|consen 1264 DGSAVEIVGLSKSALRFLLELKEKNIFPYHGVEVKRHGKA-IKWSYDEWNQKIQDNFEKLFFVSEDPSDLNEKHPNLVNK 1342 (1521)
T ss_pred CCceeehhhhHHHHHHHHHHHHhcCCccccceEEeccccc-ceecHHHHHHHHHhhhhheecccCCcchhhhhcccccch
Confidence 4667789999999999999999861 111 123488999999999999 763 33221
Q ss_pred ---E-cCCCC---CCCcccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCC-------
Q 002202 744 ---Y-DNSGS---SQSSSIQADQLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPD------- 809 (954)
Q Consensus 744 ---~-D~~~~---~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~------- 809 (954)
| |.-+. ..+-..+.+--. | +.=.|+++++++|-+||+...+.++-| .|..+. .|+
T Consensus 1343 r~IykDsygat~~~tDyQLR~NF~I----a-mtVAPeL~~pe~A~kAle~AekvLlGP-----lGMkTl-DP~D~nYr~y 1411 (1521)
T KOG3625|consen 1343 RGIYKDSYGATSPWTDYQLRPNFTI----A-MTVAPELFTPEKAWKALEIAEKVLLGP-----LGMKTL-DPDDWNYRGY 1411 (1521)
T ss_pred hheecccccCCCCccceeccCCcee----E-EEechhhcChHHHHHHHHHHHHHhcCc-----cccccc-Chhhcccccc
Confidence 2 22111 111111221100 0 111257899999999999888777632 333221 121
Q ss_pred ---C-------cccCCCCccCCccchH--HHHHHHHHHHc--C--ChHHHHH----HHHHHHHHHhcCCCCCcCCCCCcc
Q 002202 810 ---G-------RVDMSSMQSREIWSGV--TYAVAASMIHE--D--LADIGFQ----TACGIYEAAWSGTGLGYAFQTPEA 869 (954)
Q Consensus 810 ---G-------~~~~~s~~s~evW~g~--~y~lAa~mi~~--G--~~eeA~~----l~~~i~~~~~~~~g~G~~~~~PE~ 869 (954)
+ .-+.-.||+|--|.+. -|.-|.+.+.. | -.+++.. .+++-+.++... -|..+||+
T Consensus 1412 YdN~~Ds~d~~takG~NYHQGPEWlw~~GyfLrArl~f~~k~gp~~~~y~i~qv~~rL~~h~k~l~~S----~WrgLpEL 1487 (1521)
T KOG3625|consen 1412 YDNALDSDDYNTAKGFNYHQGPEWLWPIGYFLRARLYFSRKMGPETTAYTIVQVKNRLSRHYKHLERS----PWRGLPEL 1487 (1521)
T ss_pred cCCCccccchhhhccccccCCCceeehhHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhc----cccCchhh
Confidence 1 0111368888655444 45555554433 3 1223322 233334444221 14579999
Q ss_pred ccCCCCCCccCCccccHHHHHHH
Q 002202 870 WNTDDQYRSLCYMRPLAIWAMQW 892 (954)
Q Consensus 870 ~~~~~~~r~~~Y~r~~a~Wa~~~ 892 (954)
-+.++.||+ --.+.++||+-.
T Consensus 1488 TN~ngeyC~--dSc~tQAWSvac 1508 (1521)
T KOG3625|consen 1488 TNENGEYCP--DSCETQAWSVAC 1508 (1521)
T ss_pred ccCCcCccc--ccchHhHHHHHH
Confidence 999999863 234889999543
No 31
>PRK13807 maltose phosphorylase; Provisional
Probab=96.32 E-value=0.25 Score=62.10 Aligned_cols=86 Identities=16% Similarity=0.224 Sum_probs=61.3
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHH-HH--hhCCCCCCCccCCCC--CCCCCCCccccchhHHHHHHHH
Q 002202 627 LNPKFVLQVYRDVVATGDKKFAKAV-WPSVYVAMAY-MD--QFDRDGDGMIENDGF--PDQTYDTWSVSGISAYSGGLWV 700 (954)
Q Consensus 627 l~~~fVl~vyr~~~~TGD~~fL~~~-wp~vk~al~~-l~--~~D~DgDGL~e~~G~--~dqTyD~w~~~G~say~~~lw~ 700 (954)
.|..-.+++++||..|||.+||++. +|.+..+.+| .. .++.+ +|-.+..|. || -|- .....|+|++.+.-
T Consensus 426 I~adIaya~~~Y~~~TgD~~fl~~~G~e~l~etArfw~s~~~~~~~-~~~y~I~~V~GPD-EY~--~~vdNNayTN~ma~ 501 (756)
T PRK13807 426 RNGAIAYAIYNYTNYTGDESYLKEEGLEVLVEIARFWADRVHFSKR-KNKYMIHGVTGPN-EYE--NNVNNNWYTNYIAA 501 (756)
T ss_pred chHHHHHHHHHHHHHhCCHHHHHhcCHHHHHHHHHHHHHheEEeCC-CCeEEECCccccc-ccC--CCCCCchhHHHHHH
Confidence 5667899999999999999999885 8999999986 43 35543 333332221 23 121 12346899999999
Q ss_pred HHHHHHHHHHHHcCCc
Q 002202 701 AALQAASALAREVGDR 716 (954)
Q Consensus 701 aAL~aaa~mA~~LGd~ 716 (954)
-.|+.|+++++.+++.
T Consensus 502 ~~l~~A~~~~~~l~~~ 517 (756)
T PRK13807 502 WTLEYTLENLDKVKKE 517 (756)
T ss_pred HHHHHHHHHHHHhchh
Confidence 9999999999887643
No 32
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=96.11 E-value=0.32 Score=59.04 Aligned_cols=214 Identities=15% Similarity=0.172 Sum_probs=125.8
Q ss_pred hHHHHHHHHHHHHhC------C--HHHHHHHHHHHHHHHHHHHhhCCCCCCCcc-----------CCCCCC---------
Q 002202 629 PKFVLQVYRDVVATG------D--KKFAKAVWPSVYVAMAYMDQFDRDGDGMIE-----------NDGFPD--------- 680 (954)
Q Consensus 629 ~~fVl~vyr~~~~TG------D--~~fL~~~wp~vk~al~~l~~~D~DgDGL~e-----------~~G~~d--------- 680 (954)
|..++++++.++... | .+||++++|.+.+...|..+ +..|... +.|...
T Consensus 505 PTLllav~~~~~~~~~~~~~~~r~~~fL~r~fprLl~~f~Wf~~---sQ~G~~~~~~~~~n~~YrWrGR~~~~~t~lnp~ 581 (849)
T KOG2161|consen 505 PTLLLAVYRLLNREREMYGREDRSLTFLKRLFPRLLKWFTWFRK---SQEGKNVFEEGFDNEGYRWRGRDLPTGTTLNPH 581 (849)
T ss_pred ceeHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhh---cccCCcccccccccceeEeccCCCCCCceeccc
Confidence 557889999875432 2 49999999999999999752 1122222 223210
Q ss_pred ---CCCCCccc-cchhHH-----HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC---eeeEcCC
Q 002202 681 ---QTYDTWSV-SGISAY-----SGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS---YFNYDNS 747 (954)
Q Consensus 681 ---qTyD~w~~-~G~say-----~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~---yy~~D~~ 747 (954)
.+.|+-+. ..+++. .=++...|=+.+..+|+.+|+.+....+...-+++++.+.+ .|+++ ||.|-..
T Consensus 582 ~L~SGlDDyPRAs~Ps~~ElhvDl~~W~~lasrsl~~iae~lg~~~~E~~~a~~e~~~~e~L~~~HW~ee~~~y~D~g~h 661 (849)
T KOG2161|consen 582 CLSSGLDDYPRASHPSVLELHVDLRCWVGLASRSLNRIAEFLGETEAEYATAITELECKENLVQNHWSEEDQAYCDFGNH 661 (849)
T ss_pred cccccccccccccCchHHHHhhhhHHHHHHHHHHHHHHHHHhcchhhhhhhhhhHHHHHHHHHHhccChhhCeeeeccCC
Confidence 02344321 123332 24455667789999999999988444455566677999999 99864 5554111
Q ss_pred C-----C----CC---------------Ccccccccchhh--HHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcce
Q 002202 748 G-----S----SQ---------------SSSIQADQLAGQ--WYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRG 801 (954)
Q Consensus 748 ~-----~----~~---------------~~si~adqL~Gq--w~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G 801 (954)
. + .. ...+..+++ |- .+..++.|- ..+.++..+.|+.|.+.+- +.+ .||
T Consensus 662 ~~dv~~~~~p~~g~~~r~~~r~v~~~~p~~e~v~~h~-GYvSl~P~mlrLl-p~~S~rL~~~Ldli~D~~~--lwS-pYG 736 (849)
T KOG2161|consen 662 TEDVSITPEPSIGKQFRGLVRRVDWFVPNLELVDRHI-GYVSLFPFMLRLL-PATSPRLTKLLDLISDENE--LWS-PYG 736 (849)
T ss_pred hhhccccccCCcccchhhhheeccccCCcceeeeccc-ceeehhhhHHhhc-CCCchHHHHHHHHhcCccc--ccC-cch
Confidence 0 0 00 000111111 11 022344432 2567788888888877544 223 378
Q ss_pred eecCcCCC---Ccc---cCCCCccCCccchHHHHHHHHHHH-cCC-----hHHHHHHHHHH
Q 002202 802 AVNGMLPD---GRV---DMSSMQSREIWSGVTYAVAASMIH-EDL-----ADIGFQTACGI 850 (954)
Q Consensus 802 ~~~g~~p~---G~~---~~~s~~s~evW~g~~y~lAa~mi~-~G~-----~eeA~~l~~~i 850 (954)
++..++.+ |.. ..++|-.|.+|..++|.+-..|.+ +.. ...|.+|.+.+
T Consensus 737 lrSLS~~s~yym~~Nte~d~pYWRGpIW~N~NYLiLsaL~~~Y~~~~gp~~~nA~~iyeEL 797 (849)
T KOG2161|consen 737 LRSLSRSSPYYMKRNTEHDPPYWRGPIWMNVNYLILSALRHFYLYVPGPYQSNAAKIYEEL 797 (849)
T ss_pred hhhhhhcCCccccccCCCCCcccccceeeehHHHHHHHHHHhcccCCCchHHHHHHHHHHH
Confidence 87665433 221 234677789999999999999988 443 35666666543
No 33
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=96.00 E-value=0.41 Score=53.73 Aligned_cols=247 Identities=17% Similarity=0.168 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHH-HHHhhCCC--------------CCCCccC-CCCC--CCC--C-----
Q 002202 630 KFVLQVYRDVVATGDKKFAKAVWP-SVYVAMA-YMDQFDRD--------------GDGMIEN-DGFP--DQT--Y----- 683 (954)
Q Consensus 630 ~fVl~vyr~~~~TGD~~fL~~~wp-~vk~al~-~l~~~D~D--------------gDGL~e~-~G~~--dqT--y----- 683 (954)
-+|-..|-||+.|||.+-+.+-|- +++.+++ |-.+.|.. .|-|..+ .|.+ ..+ |
T Consensus 139 YPiqLAYl~wk~Tg~t~~Fde~f~~a~~~il~~~~~eQ~h~~~spY~F~R~t~r~~dTL~~~G~G~~~a~tGM~wSgFRP 218 (434)
T COG3538 139 YPIQLAYLYWKATGDTSQFDEDFRQAVETILRVWKVEQDHETDSPYRFERDTDRKSDTLGRAGKGAPTAPTGMTWSGFRP 218 (434)
T ss_pred hHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHhHhhccCCCCCeeeeccccccchhhhhCCCCCCcCcccceecCcCC
Confidence 367888999999999877666554 5666665 43222211 1223222 1111 000 1
Q ss_pred -CCccccchhHHHHHHHHHHHHHHHHHHH-HcCCcchHHHHHHHHHHHHHHHHH--hcc----CCeeeEcCCCCCCCccc
Q 002202 684 -DTWSVSGISAYSGGLWVAALQAASALAR-EVGDRGSEDYFLFKFQKAKVVYEK--LWN----GSYFNYDNSGSSQSSSI 755 (954)
Q Consensus 684 -D~w~~~G~say~~~lw~aAL~aaa~mA~-~LGd~~~A~~~~~~a~~~k~~~~~--lWn----G~yy~~D~~~~~~~~si 755 (954)
|+-..+|-..=.+.+.+--|.-+.+|.. ..++.+.|++.+.+++++++.+++ .-+ |+.|.|..+|.. ...+
T Consensus 219 SDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~~~~~a~~a~~L~~eIq~Gi~~~g~~~~~~~~~iyAyEVDG~G-n~l~ 297 (434)
T COG3538 219 SDDACEYGYLIPSNMFAVVVLSYLQEILEALPHDAEIARQAKELANEIQQGIEQFGKMDHPKGGEIYAYEVDGLG-NQLF 297 (434)
T ss_pred CccchhcccccccchhhhhhHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHhceecCCCCCeeEEEEecCCC-ceee
Confidence 2223333222235556666777788877 667788899999999999999998 332 568888665421 1233
Q ss_pred ccccchhhH-HHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccCCccchHHHHHHHHH
Q 002202 756 QADQLAGQW-YARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASM 834 (954)
Q Consensus 756 ~adqL~Gqw-~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~m 834 (954)
|-|.-+..- -+-.+|.-. .++..-..+=+.|...-..-|..|++-. |+ |++..+ -+.|||. .+
T Consensus 298 MDDaNvPSLLa~PYLG~c~-~dDpvY~~TRk~iLS~eNPYy~eG~~a~--Gi---GSpHTp---~~yvWpi-------aL 361 (434)
T COG3538 298 MDDANVPSLLAAPYLGFCE-KDDPVYQNTRKTILSSENPYYYEGKYAS--GI---GSPHTP---DHYVWPI-------AL 361 (434)
T ss_pred ccCCCchhhhhhhhhcccc-CCCHHHHHHHHHHHhcCCCceecceeec--cC---CCCCCC---CcccchH-------HH
Confidence 333222110 122344322 2333334444445442211122232211 11 222221 2379983 33
Q ss_pred HHcCC----hHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCCCCCCccCCccccHHHH------HHHHHhCCCCCCC
Q 002202 835 IHEDL----ADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWA------MQWALTRPKPKTL 902 (954)
Q Consensus 835 i~~G~----~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~Wa------~~~Al~g~~~~a~ 902 (954)
+.+|+ ..|-.+++..+...- .|.|+ .=|.|+.+. +..|-|+-=+|| ++.-+.|+++...
T Consensus 362 aiqgLTa~D~~ek~~iL~~L~~td---aGTg~---MHE~f~vd~---P~~fTR~WFsWAN~mF~Elild~~~~~~~~~ 430 (434)
T COG3538 362 AIQGLTANDDSEKKEILDMLKATD---AGTGL---MHEGFDVDD---PEQFTREWFSWANMMFCELILDLAGIRPHLS 430 (434)
T ss_pred HHhhcccCChHHHHHHHHHHHhcc---CCccc---eecccCCCC---HHHhhhHHHHHHHHHHHHHHHHHhccccccC
Confidence 34454 344455666554432 45564 447777764 568999988998 5667788887643
No 34
>PF08760 DUF1793: Domain of unknown function (DUF1793); InterPro: IPR014870 This domain is found at the C terminus of a glutaminase protein from fungi []. It is also found as a single domain protein in Bacteroides thetaiotaomicron.
Probab=95.35 E-value=0.1 Score=53.57 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hc--cCCeee--EcCCCCCCCcccccccchhhHHHHHhCCCCCCC
Q 002202 702 ALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LW--NGSYFN--YDNSGSSQSSSIQADQLAGQWYARACGLLPIVD 776 (954)
Q Consensus 702 AL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lW--nG~yy~--~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild 776 (954)
+|+||++||+.+|+.+.+++|...|+...+...+ .. +|++|. ||..++. +. +..-.+-+++|| +++|
T Consensus 2 Gi~A~s~ia~~~G~~~~a~~Y~~~A~~~a~~W~~~a~~~~g~H~~L~Y~~~~sW---sl----~YNL~~DkLLgl-~lfp 73 (171)
T PF08760_consen 2 GIGAMSEIASMLGHTEDAANYSDIAKSYASQWQTLAISTDGDHYTLAYDDPGSW---SL----KYNLYWDKLLGL-NLFP 73 (171)
T ss_pred hHHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHhhccCCCCeEEeecCCCCCc---cc----ccchHHHHhcCc-CCCc
Confidence 6899999999999999999999999998776666 66 688887 5544322 21 223346778888 4888
Q ss_pred HHHHHHHHHHHHHhccccccCCcceeecCcC
Q 002202 777 EDKARSALKKVYNYNVLKVMGGKRGAVNGML 807 (954)
Q Consensus 777 ~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~ 807 (954)
++-.....+ .|... ...+|++..+|
T Consensus 74 ~~Vy~~q~~-~Y~~~-----~~~yGlPLDsR 98 (171)
T PF08760_consen 74 ESVYDMQSA-FYPTV-----QNKYGLPLDSR 98 (171)
T ss_pred HHHHHHHHH-HHHHH-----HHHcCCccCCC
Confidence 876655444 33321 24588877754
No 35
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=95.33 E-value=0.013 Score=67.54 Aligned_cols=98 Identities=19% Similarity=0.317 Sum_probs=62.7
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHH-H--hhCCCCCCCccCCC--CCCCCCCCccccchhHHHHHHHHH
Q 002202 628 NPKFVLQVYRDVVATGDKKFAKAV-WPSVYVAMAYM-D--QFDRDGDGMIENDG--FPDQTYDTWSVSGISAYSGGLWVA 701 (954)
Q Consensus 628 ~~~fVl~vyr~~~~TGD~~fL~~~-wp~vk~al~~l-~--~~D~DgDGL~e~~G--~~dqTyD~w~~~G~say~~~lw~a 701 (954)
|....++++.||..|||.+||++. +|.+..+.++- . .++.+ +|.-+-.+ .||. |- ...-.|+|++.++--
T Consensus 107 ~adIa~a~~~Y~~~TgD~~~l~~~g~eil~etArfw~sr~~~~~~-~g~y~i~~V~GPDE-Y~--~~V~NnayTN~ma~~ 182 (370)
T PF03632_consen 107 NADIAYAIWQYYQATGDEEFLREYGAEILFETARFWASRVEYNED-TGRYEIRNVTGPDE-YH--ENVDNNAYTNAMAKW 182 (370)
T ss_dssp HHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHHHHH-EEETT-TTEEE--SB--SST-TS---SBS--HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCcHHHHHccCHHHHHHHHHHHHHheEEcCC-CCeEEecccCchhc-cc--CCCCCcHHHHHHHHH
Confidence 345788999999999999999886 99999999964 3 36643 24433222 1331 21 223578999999999
Q ss_pred HHHHHHHHHHHcCCc------chHHHHHHHHHHH
Q 002202 702 ALQAASALAREVGDR------GSEDYFLFKFQKA 729 (954)
Q Consensus 702 AL~aaa~mA~~LGd~------~~A~~~~~~a~~~ 729 (954)
.|+.|+++++.+++. ++.++|++.++++
T Consensus 183 ~L~~A~~~~~~~~~~~l~~~~~e~~~W~~ia~~i 216 (370)
T PF03632_consen 183 NLRLAAEAAERLGEEKLGLTEEEPEKWKEIADKI 216 (370)
T ss_dssp HHHHHHHHHTTS-HHHHT--HHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHHCchhhcCCCHHHHHHHHHHHhcC
Confidence 999999999999977 2334555555444
No 36
>cd07430 GH15_N Glycoside hydrolase family 15, N-terminal domain. Members of this family are N-terminal domains uniquely found in bacterial and archaeal glucoamylases and glucodextranases. Glucoamylase (glucan 1,4-alpha-glucosidase; 4-alpha-D-glucan glucohydrolase; amyloglucosidase; exo-1,4-alpha-glucosidase; gamma-amylase; lysosomal alpha-glucosidase; EC 3.2.1.3) hydrolyzes beta-1,4-glucosidic linkages of starch, glycogen and malto-oligosaccharides, releasing beta-D-glucose from the non-reducing end. Glucodextranase (glucan 1,6-alpha-glucosidase; exo-1,6-alpha-glucosidase; EC 3.2.1.70) uses an inverting reaction mechanism to hydrolyze alpha-1,6-glucosidic linkages of dextran and related oligosaccharides, releasing beta-D-glucose from the non-reducing end. These N-terminal domains adopt a structure consisting of antiparallel beta-strands, divided into two beta-sheets, with one sheet wrapped by an extended polypeptide, which appears to stabilize the domain. The function of these domains
Probab=95.15 E-value=1.8 Score=47.78 Aligned_cols=146 Identities=16% Similarity=0.244 Sum_probs=87.9
Q ss_pred cceeEEeeccCCCCCeEEEEEEecccccCCcccCCCceEEEEEEEEeCCCCeEEEEEEEEecCCCCCCCcCCCccccccc
Q 002202 185 YPRAWTVHEGEPDPELRIVCRQISPIIPHNYKESSYPVSVFTYTIYNSGKTSADITLLFTWTNSVGGDSEFTGQHYNSKT 264 (954)
Q Consensus 185 yP~aw~~y~~~~~~~v~v~~~~~SP~IP~d~k~SSlPvavf~~~v~N~~~~~~~vsi~ft~~N~vG~~~~~~~~~~n~~~ 264 (954)
=|.-++++. .++...+|+.+-|. |-..||-+-.++|+|..+.++++-++.... ++.. +.-|..+
T Consensus 82 s~~~~~~~~-~~~~r~~i~k~~~t--------dP~r~vll~~v~~~~~~~~~~~ly~~~~p~--l~n~-----g~~nta~ 145 (260)
T cd07430 82 SLAYRLVNT-DKQGRYRLEKEIFT--------DPDRDVLLMRVRFEALDGGGLRLYVLLAPH--LGNT-----GSGNTAW 145 (260)
T ss_pred CceEEEEEe-cCCCcEEEEEEEeC--------CCCcCEEEEEEEEEecCCCCeEEEEEECCc--ccCC-----CCCCEEE
Confidence 456677787 56778888888776 457899999999999876566655555322 2211 1112332
Q ss_pred ccCCCeeEEEeeecCCCCCCceEEEEEEecCCCeEEEEeceeeecCCCcccchHHHHHHHHhcCCCCCCCCccCCCCCCC
Q 002202 265 KMNDGVHAVLLHHRTSHQLPPVTFALAAQETDGVHVSLCPHFVISGNSLGLTAKDMWHEIKEHGSFDRLNSMETSVTSEP 344 (954)
Q Consensus 265 ~~~~~v~Gv~l~~~~~~~~~~~t~aiaa~~~~~v~vs~~~~f~~~~~~~~~~~~~~W~~~~~~G~l~~~~~~~~~~~s~~ 344 (954)
.....-+..+.+.+. +..+||.+.. +=...|+- | .| .++.|.+|.+||+|+..- ...
T Consensus 146 ~~~~~~~~~Lva~~~-----~~~lal~s~~-~f~~~svG--~--~g------~SDg~~DL~~~g~L~~~~-------~~a 202 (260)
T cd07430 146 VVDHGGRTALVASRG-----SVALALKASI-PFTRASVG--Y--VG------VSDGWQDLKRNGRMTWTY-------DSA 202 (260)
T ss_pred EecCCCcceEEEecC-----CeEEEEeCCC-CcceEeee--e--ec------cChhHHHHHhCCcccccc-------ccc
Confidence 211111133444322 3456666542 21122211 1 11 267899999999987642 122
Q ss_pred CCceeEEEEEEEEecCCCeEEEEEEEEe
Q 002202 345 GSSIGAAIAASVTVPPDSEGQVTFSLAW 372 (954)
Q Consensus 345 g~~~~~ava~~~~l~pg~~~tv~F~LaW 372 (954)
+. ++|+....|+|++++++.++|+.
T Consensus 203 g~---gnva~~~el~~~~~~~f~l~lgf 227 (260)
T cd07430 203 GD---GNVALTGELPLGASTEFTLALGF 227 (260)
T ss_pred CC---CcEEEEEEeCCCCceEEEEEEEe
Confidence 32 58888889999999999998884
No 37
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=93.69 E-value=2.6 Score=48.43 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCCCC-Cccc--cchhHHHHHHHHHHHHH
Q 002202 631 FVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ--FDRDGDGMIENDGFPDQTYD-TWSV--SGISAYSGGLWVAALQA 705 (954)
Q Consensus 631 fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~--~D~DgDGL~e~~G~~dqTyD-~w~~--~G~say~~~lw~aAL~a 705 (954)
.|.+..+.++.+||.+++ ...+++++++.+ +|++..|+.+ ++| .+.+ .++..|..++.+.|
T Consensus 58 ~i~~~a~a~~~~~~~~~l----~~A~~~~~fl~~~~~d~~~Gg~~~-------~~~~~g~~~~~~~~l~~~a~~l~a--- 123 (384)
T cd00249 58 QVYCFAVAYLLGWRPEWL----EAAEHGLEYLDRHGRDPDHGGWYF-------ALDQDGRPVDATKDLYSHAFALLA--- 123 (384)
T ss_pred HHHHHHHHHHhcCChhHH----HHHHHHHHHHHHhCcCCCCCCEEE-------EEcCCCCCcccccchHHHHHHHHH---
Confidence 577777889999998866 457888899865 4543235554 222 1222 34567777666544
Q ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hcc--CCee
Q 002202 706 ASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWN--GSYF 742 (954)
Q Consensus 706 aa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWn--G~yy 742 (954)
++++.+..|+++ |.+.|+++.+.+.+ +|+ |.+|
T Consensus 124 la~~~~at~d~~----~l~~A~~~~~~l~~~~~~~~g~~~ 159 (384)
T cd00249 124 AAQAAKVGGDPE----ARALAEETIDLLERRFWEDHPGAF 159 (384)
T ss_pred HHHHHHhcCCHH----HHHHHHHHHHHHHHHhccCCCccc
Confidence 555666667654 78889999999988 993 4454
No 38
>KOG4125 consensus Acid trehalase [Carbohydrate transport and metabolism]
Probab=91.58 E-value=0.86 Score=52.56 Aligned_cols=107 Identities=11% Similarity=0.139 Sum_probs=73.4
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHH---hhCCCCCCCccCCCCCCCCCCCccccchhHHHHHHHHH
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKA-VWPSVYVAMAYMD---QFDRDGDGMIENDGFPDQTYDTWSVSGISAYSGGLWVA 701 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~-~wp~vk~al~~l~---~~D~DgDGL~e~~G~~dqTyD~w~~~G~say~~~lw~a 701 (954)
-.|+..+++.-.||+.|.|.+|++. -||.++.+.+|.- ++|+ ..++..-.+.++.-=|- ...-.++|++++.=.
T Consensus 368 Hin~dv~~Af~~y~h~~~D~e~~~~t~Wpi~~~VA~F~~SRv~~~~-s~~~yHL~nVM~PDE~H-~~VNn~VYTNa~~k~ 445 (682)
T KOG4125|consen 368 HINVDVAMAFSIYLHEGIDDEYLRYTTWPIIKNVAQFFTSRVKYNS-SLGLYHLYNVMDPDEFH-NHVNNGVYTNAGIKT 445 (682)
T ss_pred EecHHHHHHHHHHHHhccchhhhccCCchhHHHHHHHhhheeEecC-ccceeeeeccCCchhcc-cccccchhhhHHHHH
Confidence 3466678889999999999998876 5999999999863 3663 33333222222110000 112356899999999
Q ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Q 002202 702 ALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK 735 (954)
Q Consensus 702 AL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~ 735 (954)
+|+-|+.||+.+|.+. -.+|++.+++++--++.
T Consensus 446 ~L~FA~~LA~hlG~~~-~~kW~eVsD~i~iprDv 478 (682)
T KOG4125|consen 446 LLKFATDLANHLGEVV-DPKWSEVSDDIYIPRDV 478 (682)
T ss_pred HHHHHHHHHHhhCCcc-ChhHHHhccCceecccc
Confidence 9999999999999664 36778777665544443
No 39
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=88.96 E-value=35 Score=39.13 Aligned_cols=201 Identities=11% Similarity=0.112 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hCCCCCCCccCCCCCCCCCCCcc-ccchhHHHHHHHHHHHHHHHH
Q 002202 631 FVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ-FDRDGDGMIENDGFPDQTYDTWS-VSGISAYSGGLWVAALQAASA 708 (954)
Q Consensus 631 fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~-~D~DgDGL~e~~G~~dqTyD~w~-~~G~say~~~lw~aAL~aaa~ 708 (954)
.|.++-+.|+.|||..+++. ++++++++.+ +-.+..|+.+. ..+.+. ..+.+.+. --+.++.+
T Consensus 120 ~l~ala~~~~at~d~~~l~~----A~~~~~~l~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~-----h~~~all~ 184 (384)
T cd00249 120 ALLAAAQAAKVGGDPEARAL----AEETIDLLERRFWEDHPGAFDE------ADPGTPPYRGSNPHM-----HLLEAMLA 184 (384)
T ss_pred HHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHhccCCCcccCC------CCCCCCCCCCCChhH-----HHHHHHHH
Confidence 56666688999999988754 5566666543 21221223221 111111 22222221 01123555
Q ss_pred HHHHcCCcchHHHHHHHHHHHHHHHHH-hcc---CCeeeE-cCCCC----CCCcccccccchhhHHHHHhCCCCCCCHHH
Q 002202 709 LAREVGDRGSEDYFLFKFQKAKVVYEK-LWN---GSYFNY-DNSGS----SQSSSIQADQLAGQWYARACGLLPIVDEDK 779 (954)
Q Consensus 709 mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWn---G~yy~~-D~~~~----~~~~si~adqL~Gqw~a~~~GL~~ild~e~ 779 (954)
+++..|++ +|.+.++++.+.+.+ +++ |.++.. +.... ...+.+.+.+. .+|.-.++-+..+.+++.
T Consensus 185 l~~~tgd~----~~~~~A~~l~~~~~~~~~~~~~G~~~e~~~~~~~~~~~~~~~~~~Pgh~-~e~a~~ll~l~~~~~~~~ 259 (384)
T cd00249 185 AYEATGEQ----KYLDRADEIADLILDRFIDAESGVVREHFDEDWNPYNGDKGRHQEPGHQ-FEWAWLLLRIASRSGQAW 259 (384)
T ss_pred HHHHhCCH----HHHHHHHHHHHHHHHHhcCcccCeEEEEECCCCCCCcCcCCCcCCCchH-HHHHHHHHHHHhhcCCHH
Confidence 56667754 477788888888877 885 444432 22111 11222323221 222212222233445554
Q ss_pred HHHHHHHHHHhccccccCCcce-eec-CcCCCCcccCCCCccCCccchHHHHHHHHHHH--cCChHHHHHHHHHHHHHHh
Q 002202 780 ARSALKKVYNYNVLKVMGGKRG-AVN-GMLPDGRVDMSSMQSREIWSGVTYAVAASMIH--EDLADIGFQTACGIYEAAW 855 (954)
Q Consensus 780 ~~saL~~v~~~n~~~~~~g~~G-~~~-g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~--~G~~eeA~~l~~~i~~~~~ 855 (954)
.....+++++.....+.+.+.| +.. ....+|.+. .-..-.|+..+.+.|..... .|. ++-.+.++.+.+.++
T Consensus 260 ~~~~a~~~~~~~~~~~~d~~~G~~~~~~~~~~~~~~---~~~~~~w~~~E~~~a~~~l~~~tgd-~~~~~~~~~~~~~~~ 335 (384)
T cd00249 260 LIEKARRLFDLALALGWDPERGGLYYSFLDDGGLLE---DDDKRWWPQTEALKAALALAGITGD-ERYWQWYQRAWAYLW 335 (384)
T ss_pred HHHHHHHHHHHHHHhCcCccCCCEEEeeECCCCCcc---cccccccHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHH
Confidence 5555555555444333333333 322 222233221 12235688777766654432 253 333444444444443
No 40
>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]
Probab=83.22 E-value=11 Score=47.21 Aligned_cols=83 Identities=18% Similarity=0.280 Sum_probs=53.1
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHH-HH--hhCCCCCCCccCCCC--CCCCCCCccccchhHHHHHHH
Q 002202 626 DLNPKFVLQVYRDVVATGDKKFAKAV-WPSVYVAMAY-MD--QFDRDGDGMIENDGF--PDQTYDTWSVSGISAYSGGLW 699 (954)
Q Consensus 626 Dl~~~fVl~vyr~~~~TGD~~fL~~~-wp~vk~al~~-l~--~~D~DgDGL~e~~G~--~dqTyD~w~~~G~say~~~lw 699 (954)
-.|..-.+++|.|+..|||.+||+++ ++.+..+..| +. +++. .+|..+-.|. || -|.. ..-.|+|++-+.
T Consensus 434 Hin~dIAyAv~~Y~q~TgD~~yl~~~G~evl~etArFW~srv~~~~-~~~~y~I~gV~GPd-EY~~--~InNN~fTN~ma 509 (772)
T COG1554 434 HINADIAYAVWNYWQVTGDDSYLADCGLEVLLETARFWASRVHFSD-RNGRYEIHGVTGPD-EYHN--HVNNNAFTNLMA 509 (772)
T ss_pred ehhhHHHHHHHHHHhhcCcHHHHHhcCHHHHHHHHHHHHHHheecc-cCCeEEEecCcCch-hhhc--cccchHHHHHHH
Confidence 34555788999999999999999998 8998888884 53 3542 2343332221 22 2221 223567777665
Q ss_pred HHHHHHHHHHHHH
Q 002202 700 VAALQAASALARE 712 (954)
Q Consensus 700 ~aAL~aaa~mA~~ 712 (954)
---|+.|.++++.
T Consensus 510 ~w~L~~ale~~~~ 522 (772)
T COG1554 510 AWNLEYALEILEW 522 (772)
T ss_pred HHHHHHHHHHHHH
Confidence 5556666666664
No 41
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=81.77 E-value=20 Score=40.83 Aligned_cols=20 Identities=35% Similarity=0.494 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhCCHHHHHH
Q 002202 631 FVLQVYRDVVATGDKKFAKA 650 (954)
Q Consensus 631 fVl~vyr~~~~TGD~~fL~~ 650 (954)
|..-+++.|.+|+|.++|+.
T Consensus 41 ~lyGv~~~~eAT~d~~yl~~ 60 (357)
T COG4225 41 FLYGVARAYEATGDAEYLDY 60 (357)
T ss_pred hHHHHHHHHHHcCcHHHHHH
Confidence 78999999999999987754
No 42
>PF07971 Glyco_hydro_92: Glycosyl hydrolase family 92; InterPro: IPR012939 This domain occurs within alpha-1,2-mannosidases, which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation [].; PDB: 2WW2_C 2WVY_B 2WVZ_B 2WW0_H 2WZS_D 2WVX_B 2WW1_D 2WW3_C.
Probab=81.38 E-value=14 Score=44.59 Aligned_cols=168 Identities=15% Similarity=0.143 Sum_probs=79.4
Q ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccCC--eee-----------EcCCCC--CCC-----c----ccccc
Q 002202 703 LQAASALAREVGDRGSEDYFLFKFQKAKVVYEKLWNGS--YFN-----------YDNSGS--SQS-----S----SIQAD 758 (954)
Q Consensus 703 L~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~lWnG~--yy~-----------~D~~~~--~~~-----~----si~ad 758 (954)
=-|.++||+.||+++.+++|.++++. +..+||.+ |++ ||.... ... + +-++.
T Consensus 244 D~~iA~~A~~LG~~~~~~~~~~Rs~n----y~n~fd~~tgf~~pr~~dG~w~~~fdp~~~~~~~~~f~EgnawqY~w~vp 319 (502)
T PF07971_consen 244 DWAIAQMAKALGKKEDADKFLKRSQN----YRNVFDPETGFFRPRNADGSWIEPFDPFYGCHWGDGFYEGNAWQYSWFVP 319 (502)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHCCGGG----GGGGEETTTTCE--B-TTS-B-SS--TT---B-STTSSSS-HHHHTT--T
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH----HHHHcCCccCCccccCCCCCCCCCCCccccccCCCceEecCcceeEecCc
Confidence 34778999999999877666655543 33466643 332 343200 000 0 01111
Q ss_pred cchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcC
Q 002202 759 QLAGQWYARACGLLPIVDEDKARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHED 838 (954)
Q Consensus 759 qL~Gqw~a~~~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G 838 (954)
|=+ +-+..++| -+++..+.|+..|....... .+..+ .|.... ..|..|+=.++.| ..-..|
T Consensus 320 hD~-~gLi~lmG-----G~~~f~~rLd~~F~~~~~~~-~~~~~-------~g~~g~-y~~gNEPs~h~py----lyn~~g 380 (502)
T PF07971_consen 320 HDV-AGLIELMG-----GKEAFVARLDAFFTEPNPFS-YGPYG-------TGNIGQ-YAHGNEPSHHIPY----LYNYAG 380 (502)
T ss_dssp T-H-HHHHHHCT-----SHHHHHHHHHHHCHS---TC-GCCCC-------HCCCTT-S-TTSGGGTTGGG----GGGGCT
T ss_pred cCH-HHHHHHhC-----CHHHHHHHHHHHhCCCcccC-ccccc-------cccccc-ccCCCCccccchh----HHHhCC
Confidence 100 11233444 47888889998887543210 00000 111100 1122232222222 122348
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCCCCCCccCCccccHHHHHHHHHhCCCCC-CCCCeeee
Q 002202 839 LADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWAMQWALTRPKPK-TLEKQMKP 908 (954)
Q Consensus 839 ~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~Wa~~~Al~g~~~~-a~~~~l~~ 908 (954)
...++-+.++.+.+..|. .+|..+.|+ --...||+|-+.-|| |+-|- .......|
T Consensus 381 ~P~kTq~~vr~i~~~~y~--------~~p~G~pGn------dD~G~MSaWyV~sal-G~YPv~pg~~~y~i 436 (502)
T PF07971_consen 381 QPWKTQEWVRRILDELYS--------NTPDGLPGN------DDCGQMSAWYVFSAL-GFYPVNPGSPEYVI 436 (502)
T ss_dssp -HHHHHHHHHHHHHHSB---------SSTT-CSST------TTTTCCHHHHHHHHH-TEE-SSTTSSEEEE
T ss_pred ChHHHHHHHHHHHHHHhC--------CccCCCCCC------cccchHHHHHHHHHc-CCCCCCCCCceEEE
Confidence 888888999999888754 455445554 334589999877654 56554 33344444
No 43
>PF06205 GT36_AF: Glycosyltransferase 36 associated family ; InterPro: IPR010403 This domain is found in the NvdB protein (P20471 from SWISSPROT), which is involved in the production of beta-(1-->2)-glucan.; PDB: 1V7V_A 1V7W_A 1V7X_A 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A ....
Probab=80.23 E-value=7.4 Score=35.84 Aligned_cols=29 Identities=34% Similarity=0.421 Sum_probs=22.9
Q ss_pred CCCceeEEEEEEEEecCCCeEEEEEEEEe
Q 002202 344 PGSSIGAAIAASVTVPPDSEGQVTFSLAW 372 (954)
Q Consensus 344 ~g~~~~~ava~~~~l~pg~~~tv~F~LaW 372 (954)
.+...++|+...++|+||++++|.|.|.=
T Consensus 56 ~~~Dpc~al~~~v~L~PGe~~~v~f~lG~ 84 (90)
T PF06205_consen 56 AGLDPCAALQVRVTLEPGEEKEVVFLLGA 84 (90)
T ss_dssp BSS-EEEEEEEEEEE-TT-EEEEEEEEEE
T ss_pred CCcCeEEEEEEEEEECCCCEEEEEEEEEE
Confidence 45668889999999999999999999873
No 44
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=78.37 E-value=2.6 Score=51.43 Aligned_cols=92 Identities=8% Similarity=-0.138 Sum_probs=67.4
Q ss_pred EEEEEcCCCCCCCcccCCCcEEEEEecCCeeeEeecCCCCCccccccccCCCCCCccCCCCCceeEEeecceeEEeeccC
Q 002202 116 QRWQIFPRVCEDKPVLANQFSVFVSRSNGQKYSSVLCPKTPEVLKDTTAAGIGSWDWNLKGDKSTYHALYPRAWTVHEGE 195 (954)
Q Consensus 116 ~~w~i~~~~~~~~~~~~~qF~v~~~~~~~~~~~~VL~~~~~~~~~~~~~~gl~~w~w~~~~~~~~y~alyP~aw~~y~~~ 195 (954)
|.|+...++......++.+++.+...-...-....|++.. + -+..|+|.+..-+..++..||+|+++|. .
T Consensus 147 c~~~~~~gl~sWd~ni~~~~~~Y~~L~PRsWt~y~~~~~~---l------~v~~rqvsp~ip~~y~dsslP~a~fv~~-v 216 (879)
T KOG2119|consen 147 CGQRPATGLSSWDWNIPGEKSTYHGLFPRSWTEYDGEPDG---L------TVVCRQVSPVIPHNYRDSSLPVAVFVFT-V 216 (879)
T ss_pred cccCCCCCccccccccCCcceeEeeecCceeEEeeccccc---c------EEEEeecccccccccccccCcceEEEEE-c
Confidence 8888888887777778888888866544433344454432 1 2457888888888999999999999998 4
Q ss_pred CCCCeEEEEEEecccccCCcccCC
Q 002202 196 PDPELRIVCRQISPIIPHNYKESS 219 (954)
Q Consensus 196 ~~~~v~v~~~~~SP~IP~d~k~SS 219 (954)
+ ++-.+++.+|++.+++.-.++
T Consensus 217 ~--N~~~~e~~vsl~ft~~n~~g~ 238 (879)
T KOG2119|consen 217 E--NTGKEEAEVSLLFTFRNGTGN 238 (879)
T ss_pred c--ccccceEEEEEEEEEecCCCc
Confidence 4 678889999999996554443
No 45
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=76.75 E-value=35 Score=38.67 Aligned_cols=107 Identities=20% Similarity=0.218 Sum_probs=61.0
Q ss_pred ccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCCCCCccccchhHHH--HHHH
Q 002202 622 ARWKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDTWSVSGISAYS--GGLW 699 (954)
Q Consensus 622 ~~W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~~D~DgDGL~e~~G~~dqTyD~w~~~G~say~--~~lw 699 (954)
..|.|.-.--+-.+.++.+.|||..++++...++...+++ -+|+ .+|++... ...+.+..|. .+.+. +|.+
T Consensus 120 ~~wiD~~~M~~p~l~~~~~~tgd~~~~~~a~~q~~~~~~~--~~d~-~tGl~~h~-~~~~~~~~~s---~~~WsRG~gW~ 192 (336)
T PF07470_consen 120 QVWIDGMYMNLPFLAWAGKLTGDPKYLDEAVRQFRLTRKY--LYDP-ETGLYYHG-YTYQGYADWS---DSFWSRGNGWA 192 (336)
T ss_dssp EEETTHHHHHHHHHHHHHHHHTGHHHHHHHHHHHHHHHHH--HB-T-TTSSBESE-EETTSSSTTS---T--BHHHHHHH
T ss_pred ceeeccccccHHHHHHHHHHHCCcHHHHHHHHHHHHHHHh--ccCC-CCCceeec-cCCCCCcCcc---cccCcchhhHH
Confidence 3455644334555667799999999999988888876666 3675 47888631 1122222211 12232 6666
Q ss_pred HHHHHHHHHHHHHcC-CcchHHHHHHHHHHHHHHHHHhcc
Q 002202 700 VAALQAASALAREVG-DRGSEDYFLFKFQKAKVVYEKLWN 738 (954)
Q Consensus 700 ~aAL~aaa~mA~~LG-d~~~A~~~~~~a~~~k~~~~~lWn 738 (954)
+.+|..+.++ |- +.+....+.+.++++.+.+.++.+
T Consensus 193 ~~Gl~~~l~~---lp~~~~~~~~~~~~~~~~~~~l~~~q~ 229 (336)
T PF07470_consen 193 IYGLAEVLEY---LPEDHPERDELLEIAKKLADALARYQD 229 (336)
T ss_dssp HHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHH---hcchhhhHHHHHHHHHHHHHHHHhcCC
Confidence 6665444443 42 333445666777777666655665
No 46
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=75.80 E-value=11 Score=42.87 Aligned_cols=198 Identities=18% Similarity=0.281 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCCCC-Cccc-cchhHHHHHHHHHHHHHH
Q 002202 631 FVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ--FDRDGDGMIENDGFPDQTYD-TWSV-SGISAYSGGLWVAALQAA 706 (954)
Q Consensus 631 fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~--~D~DgDGL~e~~G~~dqTyD-~w~~-~G~say~~~lw~aAL~aa 706 (954)
|++.....++.|||.+.+ ..++++++.+.+ +|++ .|+... ++| .|.. .+.+++. -.+.++
T Consensus 85 f~l~ala~~~~tg~~~~~----~~A~~~~~~l~~~~~d~~-~g~~~~------~~~~~~~~~r~~n~~m-----hl~eA~ 148 (346)
T PF07221_consen 85 FALLALAEARATGDPEAL----ELAEQTLEFLERRFWDPE-GGGYRE------SFDPDWSPPRGQNPHM-----HLLEAF 148 (346)
T ss_dssp HHHHHHHHHHCTT-TTHH----HHHHHHHHHHHHHTEETT-TTEE--------EETTTSSCBEEHHHHH-----HHHHHH
T ss_pred HHHHHHHHHHHhCChhHH----HHHHHHHHHHHHHhcccc-cCccee------ccCCccccCCCCChhH-----HHHHHH
Confidence 666555448999998664 455677777754 4553 344321 222 1322 2455543 334555
Q ss_pred HHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccC------CeeeEcC----CCCC----CCcccccccchh-hHHHH-H-
Q 002202 707 SALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNG------SYFNYDN----SGSS----QSSSIQADQLAG-QWYAR-A- 768 (954)
Q Consensus 707 a~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG------~yy~~D~----~~~~----~~~si~adqL~G-qw~a~-~- 768 (954)
..+++..|+ .+|.+.++++.+.|.. +++. +||.-|- .... ....|.+.+.+- -|++. +
T Consensus 149 l~l~~~~~~----~~~~~~a~~l~~~~~~~f~~~~~g~~~E~f~~dw~~~~~~~~~d~~~~~~~~pGH~~E~~wll~~~~ 224 (346)
T PF07221_consen 149 LALYEATGD----PRYLDRAEELLDLFLDRFADPESGALPEFFDRDWNPLPDGSGDDTFRGRIVEPGHDFEWAWLLLEAA 224 (346)
T ss_dssp HHHHHHHHH----HHHHHHHHHHHHHHHTTCHHCCTTEETSEEETTSEBETTTTTTHSTTTSSB-HHHHHHHHHHHHHHH
T ss_pred HHHHHhccC----HHHHHHHHHHHHHHHHHHHHhccCeeeeeeccccccccccccccccccCccCCchhHHHHHHHHHHH
Confidence 666666664 3488888888888886 8853 2332111 0000 011233332221 12221 1
Q ss_pred --hCCCCCCCHHHHHHHHHHHHHhccccccCCcc-eeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcC-ChHHHH
Q 002202 769 --CGLLPIVDEDKARSALKKVYNYNVLKVMGGKR-GAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHED-LADIGF 844 (954)
Q Consensus 769 --~GL~~ild~e~~~saL~~v~~~n~~~~~~g~~-G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G-~~eeA~ 844 (954)
.+. -+++.. ....++++..+....+.+. |+...+..+|.+.. .+.--||..+...|..+..+- ..++.+
T Consensus 225 ~~~~~---~~~~~~-~~a~~l~~~~~~~G~d~~~gG~~~~~d~~g~~~~---~~k~wW~q~Eal~a~~~~~~~tg~~~~~ 297 (346)
T PF07221_consen 225 RLTGR---GDPDWL-ERARRLFDFALEHGWDREGGGLFYSVDRDGKPPD---RSKRWWPQAEALKALLAAYELTGDEKYL 297 (346)
T ss_dssp HHCHC---T-HTHH-HHHHHHHHHHHHHHBSTTTSSB-SEEETTS-BSS---T-EEHHHHHHHHHHHHHHHHHH--HHHH
T ss_pred Hhccc---ccHHHH-HHHHHHHHHHHHheEecCCCeEEEEEeCCCCccc---cCccccHHHHHHHHHHHHHhccCcHHHH
Confidence 222 233333 2223343333321111122 45444455565443 223469999888777666541 234555
Q ss_pred HHHHHHHHHHh
Q 002202 845 QTACGIYEAAW 855 (954)
Q Consensus 845 ~l~~~i~~~~~ 855 (954)
+.++.+++-++
T Consensus 298 ~~~~~~~~~~~ 308 (346)
T PF07221_consen 298 DWARRVWDYIF 308 (346)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55666555443
No 47
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=72.78 E-value=16 Score=42.26 Aligned_cols=101 Identities=18% Similarity=0.199 Sum_probs=58.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh---hCCCCCCCccCCCCCCCCCCCc-cccchhHHHHHHHHHH
Q 002202 627 LNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ---FDRDGDGMIENDGFPDQTYDTW-SVSGISAYSGGLWVAA 702 (954)
Q Consensus 627 l~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~---~D~DgDGL~e~~G~~dqTyD~w-~~~G~say~~~lw~aA 702 (954)
.|..++++..|.|+.|||..+| ...+++.+|+.. .|+ .+|++. +|....+ |+- .-...-+|.+|.++
T Consensus 156 sN~~~~~laarL~~~t~~~~Yl----~~A~~~~~W~~~~~L~d~-~~g~v~-Dg~~~~~-~c~~~~~~~~TYNqG~~l-- 226 (370)
T PF03663_consen 156 SNGPAAQLAARLYRITGDQTYL----DWAKKIYDWMRDSGLIDP-STGLVY-DGINIDG-NCTNINKTKWTYNQGVFL-- 226 (370)
T ss_dssp HHHHHHHHHHHHHHHH--HHHH----HHHHHHHHHHHH-HHB---TTS-B---EE-TTS-SS-B-TT---HHHHHHHH--
T ss_pred chHHHHHHHHHHHHhcCChHHH----HHHHHHHHHhhcceeEEC-CCcEEE-eCCccCC-CCCcCCCceechHHHHHH--
Confidence 4666899999999999998644 567788889754 344 468876 2321111 111 12346689999886
Q ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC
Q 002202 703 LQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS 740 (954)
Q Consensus 703 L~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~ 740 (954)
.++++|.+.-+++ +.|.+.++++.+...+ |+...
T Consensus 227 -~a~~~Ly~~T~~~---~~yl~~A~~la~~~~~~~~~~~ 261 (370)
T PF03663_consen 227 -GAAAYLYNATNDE---QTYLDRAEKLADAAINHFFDNG 261 (370)
T ss_dssp -HHHHHHHHHH--H----HHHHHHHHHHHHHHHHHEETT
T ss_pred -HHHHHHHHhcCCc---cHHHHHHHHHHHHHHHHhCCCC
Confidence 4555666666543 2799999999888766 77533
No 48
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]
Probab=69.05 E-value=2e+02 Score=33.57 Aligned_cols=214 Identities=13% Similarity=0.143 Sum_probs=106.8
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCCCCCccccchhHHHHHHHHHHHHHH
Q 002202 629 PKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ--FDRDGDGMIENDGFPDQTYDTWSVSGISAYSGGLWVAALQAA 706 (954)
Q Consensus 629 ~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~--~D~DgDGL~e~~G~~dqTyD~w~~~G~say~~~lw~aAL~aa 706 (954)
-.|+++.+..+..+|+....+ .+..+++-+.+ +|. +.+|.- -..++|.-...|-|+.. -.+++|
T Consensus 118 haFallA~A~~a~a~~~~a~~----~~~~a~~~l~~~~~~~-~~pl~~----~e~~~~~~~pl~sNp~M-----Hl~EA~ 183 (388)
T COG2942 118 HAFALLAAAHAATAGPPRADE----LLDEALDVLERRFWRE-EHPLGG----FEEDNPGSAPLGSNPHM-----HLLEAM 183 (388)
T ss_pred HHHHHHHHHHHHhcCChhHHH----HHHHHHHHHHHHHhhh-cCCccc----ccccCCCCCccCCCcch-----HHHHHH
Confidence 349999999999998876443 23444444433 343 234432 12344542333544432 223444
Q ss_pred HHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccC------CeeeEcC--CCCCCCcccccccchhhHHHHHhCCCCCCCH
Q 002202 707 SALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNG------SYFNYDN--SGSSQSSSIQADQLAGQWYARACGLLPIVDE 777 (954)
Q Consensus 707 a~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG------~yy~~D~--~~~~~~~si~adqL~Gqw~a~~~GL~~ild~ 777 (954)
..-.+..|+ ..|...+.++.+.+-. |-++ |+|.-|- ....+...+.+.+-+ .|.-.++-+......
T Consensus 184 LA~~e~~~~----~~~~~~A~~ia~l~~~rf~d~~~g~v~E~fd~dW~p~~~frg~~~ePGH~f-EW~~Lll~~a~~~~~ 258 (388)
T COG2942 184 LAAYEATGE----KTWLDRADRIADLIISRFADAESGLVREHFDHDWNPAHGFRGRGIEPGHQF-EWAWLLLDIARRRGR 258 (388)
T ss_pred HHHHhccCc----hhHHHHHHHHHHHHHHHhhhcccCcHhhhccccCCcCCCcccCCCCCchHH-HHHHHHHHHHHHhch
Confidence 444555565 4577888888777766 7764 3443222 111123345543322 222222333333344
Q ss_pred HHHHHHHHHHHHhccccccCCc-ceeecCcCCCCcccCCCCccCCccchHHHHHHHHHHHcCC--hHHHHHHHHHHHHHH
Q 002202 778 DKARSALKKVYNYNVLKVMGGK-RGAVNGMLPDGRVDMSSMQSREIWSGVTYAVAASMIHEDL--ADIGFQTACGIYEAA 854 (954)
Q Consensus 778 e~~~saL~~v~~~n~~~~~~g~-~G~~~g~~p~G~~~~~s~~s~evW~g~~y~lAa~mi~~G~--~eeA~~l~~~i~~~~ 854 (954)
+......++++..-+..--+.+ -|+.....++|.+.... .--||..++.-|+..+..+- .+.=.+....+++.+
T Consensus 259 ~~l~~~A~~lf~~a~~~g~d~~~gg~~~sl~~D~~~~d~~---~r~WpQ~E~l~AA~ala~~~~~~~~y~~~~~R~~~~~ 335 (388)
T COG2942 259 AWLIEAARRLFDIAVADGWDPERGGAYYSLDDDGSPHDRQ---QRLWPQTEALKAAVALAETTGARERYWQWYARAWDYL 335 (388)
T ss_pred hHHHHHHHHHHHHHHHhccCcccCeEEEEecCCCCcCCHH---HhhChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 4455555555554442211222 24555666777665431 24699998877776665532 344444444455544
Q ss_pred hcC---CCCCcCC
Q 002202 855 WSG---TGLGYAF 864 (954)
Q Consensus 855 ~~~---~g~G~~~ 864 (954)
|.. ..+|++|
T Consensus 336 ~~hl~d~~~G~W~ 348 (388)
T COG2942 336 WWHLDDPEYGLWF 348 (388)
T ss_pred HHhcCCCcCCcch
Confidence 432 2355444
No 49
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=66.58 E-value=1.2e+02 Score=34.46 Aligned_cols=90 Identities=16% Similarity=0.216 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCCCCCccc-cchhHHHHHHHHHHHHHHHH
Q 002202 632 VLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ--FDRDGDGMIENDGFPDQTYDTWSV-SGISAYSGGLWVAALQAASA 708 (954)
Q Consensus 632 Vl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~--~D~DgDGL~e~~G~~dqTyD~w~~-~G~say~~~lw~aAL~aaa~ 708 (954)
|...-+-++ .|+.++++ .++++++|+.+ +|.+..|+... .-++-++ .-...|-+++.+ .++++
T Consensus 27 ~~~fa~a~~-~g~~~~l~----~A~~~~~fl~~~~~D~~~Gg~~~~------~~~~~~~~~~~~~Y~~af~l---~ala~ 92 (346)
T PF07221_consen 27 LYTFARAYR-LGRPEYLE----LAEHGFDFLRKHFRDPEYGGWYRS------LDDGGPLDPQKDLYDQAFAL---LALAE 92 (346)
T ss_dssp HHHHHHHHH-TTSHHHHH----HHHHHHHHHHHTTBTTTTSSBSSE------EETTEEEE--EEHHHHHHHH---HHHHH
T ss_pred HHHHHHHHh-cCchhHHH----HHHHHHHHHHHhcccCCCCCEEEE------eCCCCCCccccchHHHHHHH---HHHHH
Confidence 444444456 78888664 58889999865 55543344321 0011111 225577776554 44455
Q ss_pred HHHHcCCcchHHHHHHHHHHHHHHHHH-hccCC
Q 002202 709 LAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGS 740 (954)
Q Consensus 709 mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~ 740 (954)
|+..|+++ +.+.|+++.+.+++ +|+.+
T Consensus 93 -~~~tg~~~----~~~~A~~~~~~l~~~~~d~~ 120 (346)
T PF07221_consen 93 -ARATGDPE----ALELAEQTLEFLERRFWDPE 120 (346)
T ss_dssp -HHCTT-TT----HHHHHHHHHHHHHHHTEETT
T ss_pred -HHHhCChh----HHHHHHHHHHHHHHHhcccc
Confidence 67778775 56788899999999 99864
No 50
>COG4833 Predicted glycosyl hydrolase [Carbohydrate transport and metabolism]
Probab=61.41 E-value=16 Score=40.10 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCC---CCCCCCCccccchhHHHHHHHHHHHHHHH
Q 002202 631 FVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQFDRDGDGMIENDGF---PDQTYDTWSVSGISAYSGGLWVAALQAAS 707 (954)
Q Consensus 631 fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~~D~DgDGL~e~~G~---~dqTyD~w~~~G~say~~~lw~aAL~aaa 707 (954)
|+++..+++..- -+...-..+..+|+.+---|+|||++. |. .|-|-+ +.-...||||.++. |++..
T Consensus 153 a~I~~ar~~~~~------~krL~~AMK~~dWi~~~Lid~DGlV~D-Gi~~ledGt~l---vr~~~tYcQGV~IG-le~~L 221 (377)
T COG4833 153 AGIFLARYPDQY------GKRLKRAMKMADWIDRTLIDPDGLVFD-GIKALEDGTSL---VRAQYTYCQGVVIG-LETEL 221 (377)
T ss_pred ceEEEeechHHH------HHHHHHHHHHHHHHHhhccCCCcchhh-hhhhhccCchh---heeeccccceeEee-chhhh
Confidence 566666665321 122222334457886644568899983 32 122222 23456899999887 66555
Q ss_pred HHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCCeeeEcCC
Q 002202 708 ALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGSYFNYDNS 747 (954)
Q Consensus 708 ~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~yy~~D~~ 747 (954)
++-+ |+.+.| +|-..+.+..+..++ +=+-.-+..+..
T Consensus 222 ~Lr~--~~a~~A-~Y~a~~h~~vaav~~~mT~~Gv~~~e~g 259 (377)
T COG4833 222 ALRT--GPAARA-RYCARVHRLVAAVNEHMTPLGVLRGEAG 259 (377)
T ss_pred hhhc--CchHHH-HHHHHHHHHHHHHHHhcCccceeecCCC
Confidence 4433 555544 477777777777777 765444444433
No 51
>PF06165 Glyco_transf_36: Glycosyltransferase family 36; InterPro: IPR010383 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyltransferase family 36 includes cellobiose phosphorylase (2.4.1.20 from EC), cellodextrin phosphorylase (2.4.1.49 from EC), and chitobiose phosphorylase. Many members of this family contain two copies of the domain represented in this entry.; PDB: 3QDE_A 3RRS_B 1V7V_A 1V7W_A 1V7X_A 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A ....
Probab=52.03 E-value=59 Score=30.96 Aligned_cols=56 Identities=14% Similarity=0.223 Sum_probs=44.4
Q ss_pred eeEEeecceeEEeeccCCCCCeEEEEEEecccccCCcccCCCceEEEEEEEEeCCCCeEEEEEEE
Q 002202 179 STYHALYPRAWTVHEGEPDPELRIVCRQISPIIPHNYKESSYPVSVFTYTIYNSGKTSADITLLF 243 (954)
Q Consensus 179 ~~y~alyP~aw~~y~~~~~~~v~v~~~~~SP~IP~d~k~SSlPvavf~~~v~N~~~~~~~vsi~f 243 (954)
..|...|=...+.|. -...+|+++++.+ +|.+- |+=+-..+|+|.++++.+++|.-
T Consensus 30 ~~y~~~~g~g~~~f~-~~~~gi~~~~~v~---V~~~~-----~vEi~~l~l~N~~~~~r~L~vts 85 (110)
T PF06165_consen 30 DEYEVRHGFGYTRFE-REDGGIETELTVF---VPPDD-----PVEIRRLRLTNTSNRPRRLSVTS 85 (110)
T ss_dssp SEEEEEEESSEEEEE-EEETTEEEEEEEE-----TTS-----SEEEEEEEEEE-SSS-EEEEEEE
T ss_pred CcEEEEECCCeEEEE-EEeCCEEEEEEEE---EcCCC-----CEEEEEEEEEECcCCcEEEEEEE
Confidence 478889999999998 5678899998887 55544 89999999999999999988865
No 52
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=46.53 E-value=1.6e+02 Score=32.72 Aligned_cols=137 Identities=17% Similarity=0.082 Sum_probs=71.4
Q ss_pred ccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hhCCCCCCCccCCCCCCCCCCCccccchhHHHHHHHHHH
Q 002202 624 WKDLNPKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMD-QFDRDGDGMIENDGFPDQTYDTWSVSGISAYSGGLWVAA 702 (954)
Q Consensus 624 W~Dl~~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~-~~D~DgDGL~e~~G~~dqTyD~w~~~G~say~~~lw~aA 702 (954)
|.++....++.+.+.|+.|+|..+++ .++++++++. .++.+.+|.....+ .+...-.|. +|.+...
T Consensus 137 ~~hG~aGi~~~L~~l~~~t~d~~~l~----~A~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~wc-hG~aGi~------- 203 (321)
T cd04791 137 LLHGWAGIALFLLRLYKATGDSRYLE----LAEEALDKELARAVVDDGGLLQVDE-GARLLPYLC-SGSAGLG------- 203 (321)
T ss_pred cccCcHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHhhccCCCCceEcCC-CCccCcccC-CCcHHHH-------
Confidence 35777888999999999999999875 4566666653 34433344432110 000001121 2222222
Q ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hccCCeeeEcCCCCCCCcccccccchhhHHHHHhCCCCCCCHHHHH
Q 002202 703 LQAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWNGSYFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKAR 781 (954)
Q Consensus 703 L~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWnG~yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~ild~e~~~ 781 (954)
.+...+.+.++++ +|.+.++++.+.+.+ .|+... +. .| . +|.-. .+..+.....+++.+
T Consensus 204 -~~l~~l~~~~~d~----~~~~~a~~~~~~~~~~~~~~~~--lc-hG---~--------~G~~~-~l~~~~~~~~~~~~~ 263 (321)
T cd04791 204 -LLMLRLEAITGDK----RWRDEADGIAHAALSSCYANPG--LF-SG---T--------AGLGA-HLNDLAAEGDNALYK 263 (321)
T ss_pred -HHHHHHHHhcCCH----HHHHHHHHHHHHHhhhhccCcc--cc-CC---c--------HhHHH-HHHhhcccccChHHH
Confidence 3334566667665 466777777777666 543211 11 11 0 12111 122223345566677
Q ss_pred HHHHHHHHhccc
Q 002202 782 SALKKVYNYNVL 793 (954)
Q Consensus 782 saL~~v~~~n~~ 793 (954)
..++++.++.+.
T Consensus 264 ~~~~~~~~~~~~ 275 (321)
T cd04791 264 AAAERLALYLIA 275 (321)
T ss_pred HHHHHHHHHhcc
Confidence 777777776653
No 53
>PF09137 Glucodextran_N: Glucodextranase, domain N; InterPro: IPR015220 Glucodextranase domain N, uniquely found in bacterial and archaeal glucoamylases and glucodextranases, adopts a structure consisting of 17 antiparallel beta-strands. These beta-strands are divided into two beta-sheets, and one of the beta-sheets is wrapped by an extended polypeptide, which appears to stabilise the domain. This domain, together with glycoside hydrolase domain A (IPR011613 from INTERPRO), is mainly involved with catalytic activity, hydrolysing alpha-1,6-glucosidic linkages of dextran to release beta-D-glucose from the non-reducing end via an inverting reaction mechanism []. ; PDB: 1UG9_A 1ULV_A 1LF6_B 1LF9_A.
Probab=44.85 E-value=4.9e+02 Score=29.10 Aligned_cols=164 Identities=20% Similarity=0.260 Sum_probs=80.8
Q ss_pred CCCCeEEEEEEecccccCCcccCCCceEEEEEEEEeCCC--CeEEEEEEEEec-CCCCCCCcCCCcccccccccCCCeeE
Q 002202 196 PDPELRIVCRQISPIIPHNYKESSYPVSVFTYTIYNSGK--TSADITLLFTWT-NSVGGDSEFTGQHYNSKTKMNDGVHA 272 (954)
Q Consensus 196 ~~~~v~v~~~~~SP~IP~d~k~SSlPvavf~~~v~N~~~--~~~~vsi~ft~~-N~vG~~~~~~~~~~n~~~~~~~~v~G 272 (954)
++..-+|+.+.|+ |=-.++.+..+++++..+ +++++.+++.-. |..|. =|+....+..-..
T Consensus 93 ~~gry~i~k~i~t--------DP~rd~ll~~v~f~al~g~~~~~~ly~l~~Phl~n~G~--------~n~a~~~~~~g~~ 156 (269)
T PF09137_consen 93 KQGRYRITKEIFT--------DPDRDVLLMRVTFEALDGSVGDYRLYALLAPHLNNTGA--------GNSAWVVDAAGRP 156 (269)
T ss_dssp TTSSEEEEEEEEE---------TTSSEEEEEEEEEESSS-GGG-EEEEEEEE-CCCBST--------TEEEEEECECCEE
T ss_pred CCCCEEEEEEEEC--------CCCCCEEEEEEEEecCCCCccceEEEEEEcccccCCCC--------CcEEEEecCCCce
Confidence 4555677777665 445688889999988777 677777777432 22221 1222111111112
Q ss_pred EEeeecCCCCCCceEEEEEEecCCCeEEEEeceeeecCCCcccchHHHHHHHHhcCCCCCCCCccCCCCCCCCCceeEEE
Q 002202 273 VLLHHRTSHQLPPVTFALAAQETDGVHVSLCPHFVISGNSLGLTAKDMWHEIKEHGSFDRLNSMETSVTSEPGSSIGAAI 352 (954)
Q Consensus 273 v~l~~~~~~~~~~~t~aiaa~~~~~v~vs~~~~f~~~~~~~~~~~~~~W~~~~~~G~l~~~~~~~~~~~s~~g~~~~~av 352 (954)
+++.++ .+..+|+.+.. +=...|+- ++..+|-|++|.+||+|+..-. ..-.+-|
T Consensus 157 ~L~A~~-----~~~~lAL~as~-~f~~~S~G----------yvG~SDG~~dL~~~g~l~w~y~----------~A~~GNV 210 (269)
T PF09137_consen 157 ALVAWK-----GPVALALAASP-PFTRASVG----------YVGVSDGWQDLKRDGRLDWQYD----------SAGDGNV 210 (269)
T ss_dssp EEEECC-----TTEEEEEEETT---SCEEEE----------ETTTSSHHHHHHHHSS-----S----------EEEEESE
T ss_pred EEEEec-----CCcEEEEecCC-CceeEEEE----------EeecCccHHHHhhcCccccccc----------cCCCCcE
Confidence 334321 24556666542 21112211 2223678999999999875311 0111335
Q ss_pred EEEEEecC--CCeEEEEEEEEeecCcccccCCcceecccccccCCccchHHHHHHHHHHh-hhh-HHHHHHHhc
Q 002202 353 AASVTVPP--DSEGQVTFSLAWDCPEVNFMSGKTYYRRYTKFYGTHQNAAANIARDAILE-HGS-WELQIEAWQ 422 (954)
Q Consensus 353 a~~~~l~p--g~~~tv~F~LaW~~P~~~f~~g~~~~rrYt~ff~~~~~~a~~ia~~al~~-~~~-we~~i~~wq 422 (954)
+..-.|+. ....+++++|+. ++.-.+|...|..+|.. |+. +++-+..|+
T Consensus 211 al~gel~~~~~~~~~f~laLgF---------------------G~~~~~A~~~A~asL~~gf~~~~~~Y~~~W~ 263 (269)
T PF09137_consen 211 ALTGELPLGASGNTEFTLALGF---------------------GDSAEEAAATARASLARGFEEVLARYNGGWR 263 (269)
T ss_dssp EEEEEE-T-STTECEEEEEEEE---------------------ESSHHHHHHHHHHHHCC-HHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCceEEEEEEc---------------------CCCHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 55555555 455567777773 33334566666666652 222 344455665
No 54
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=40.13 E-value=68 Score=37.22 Aligned_cols=107 Identities=24% Similarity=0.300 Sum_probs=61.2
Q ss_pred ccCccccCCChHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHH-HhhCCCC--CCCccCCCCCCCCCCCccccc
Q 002202 619 YDTARWKDLNPKFVLQVYRDVVATGDK-----KFAKAVWPSVYVAMAYM-DQFDRDG--DGMIENDGFPDQTYDTWSVSG 690 (954)
Q Consensus 619 ~D~~~W~Dl~~~fVl~vyr~~~~TGD~-----~fL~~~wp~vk~al~~l-~~~D~Dg--DGL~e~~G~~dqTyD~w~~~G 690 (954)
.|...| +.+++-+-|+.|||. .||+ ..+++.+++ ..||.+. -||.-... +.+. ....
T Consensus 87 ~DD~aw------~~la~l~aye~t~~~~~~~~~yL~----~A~~i~~~~~~~wd~~~cgGGi~W~~~----~~~~-~~~~ 151 (370)
T PF03663_consen 87 YDDNAW------WALALLRAYELTGDQPSDNPKYLD----LAKEIFDFLISGWDDTSCGGGIWWSID----DTNS-GYDY 151 (370)
T ss_dssp HHHHHH------HHHHHHHHHHHH--H-----HHHH----HHHHHHHHHHHTB-SGG-GS-BEEET--------T-EEEE
T ss_pred cChHHH------HHHHHHHHHHhhCCCcchHHHHHH----HHHHHHHHHHHhcCCccCCCCcccccc----ccCC-CCCc
Confidence 455566 899999999999999 7664 456666775 4588652 23322100 0111 1223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH--hccCC-eeeEcCC
Q 002202 691 ISAYSGGLWVAALQAASALAREVGDRGSEDYFLFKFQKAKVVYEK--LWNGS-YFNYDNS 747 (954)
Q Consensus 691 ~say~~~lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~--lWnG~-yy~~D~~ 747 (954)
.++-.+++. +..+++|++..|++ .|.+.|+++-+++.+ |.|++ +..+|..
T Consensus 152 Kna~sN~~~---~~laarL~~~t~~~----~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg~ 204 (370)
T PF03663_consen 152 KNAISNGPA---AQLAARLYRITGDQ----TYLDWAKKIYDWMRDSGLIDPSTGLVYDGI 204 (370)
T ss_dssp EEHHHHHHH---HHHHHHHHHHH--H----HHHHHHHHHHHHHHH-HHB--TTS-B--EE
T ss_pred ccccchHHH---HHHHHHHHHhcCCh----HHHHHHHHHHHHhhcceeEECCCcEEEeCC
Confidence 555556543 46777888888655 489999999999887 99765 5556543
No 55
>COG3537 Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]
Probab=38.42 E-value=3.5e+02 Score=33.77 Aligned_cols=61 Identities=11% Similarity=0.079 Sum_probs=38.9
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHHhcCCCCCcCCCCCccccCCCCCCccCCccccHHHHHHHHHhCCCCCCCCCee
Q 002202 831 AASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWAMQWALTRPKPKTLEKQM 906 (954)
Q Consensus 831 Aa~mi~~G~~eeA~~l~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~Wa~~~Al~g~~~~a~~~~l 906 (954)
.....+.|..+..-++++.+....+. -+|+.+-++ --..+||+|-+..|| |+-|.-+.+.+
T Consensus 614 PyLy~yiG~pd~T~~~v~~l~~k~f~--------~s~~gyPGn------eD~GaMSsWyVwsAL-GlYP~~pgs~~ 674 (768)
T COG3537 614 PYLYNYIGQPDKTQRLVRRLRRKHFH--------PSPDGYPGN------EDAGAMSSWYVWSAL-GLYPVTPGSPI 674 (768)
T ss_pred hhHHHhcCCchhHHHHHHHHHHHhcC--------CCCCCCCCC------cccchHHHHHHHHhc-ccccCCCCCce
Confidence 33556669999999999998866533 345444443 334589999876654 66665333333
No 56
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=37.14 E-value=2.5e+02 Score=35.07 Aligned_cols=99 Identities=22% Similarity=0.365 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh---hCCCCCCCccCCCCCCCCCCCccc--cchhHHHHHHHHHHH
Q 002202 629 PKFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQ---FDRDGDGMIENDGFPDQTYDTWSV--SGISAYSGGLWVAAL 703 (954)
Q Consensus 629 ~~fVl~vyr~~~~TGD~~fL~~~wp~vk~al~~l~~---~D~DgDGL~e~~G~~dqTyD~w~~--~G~say~~~lw~aAL 703 (954)
+..++.+.||+..|||..-+ ..+.+.|+-|.. +|.=+-|+-.+ .|-+.|.+ .-.-.|-|++.+
T Consensus 212 ~~~l~~Llr~~~~~~d~~~~----~~~~~TL~~ma~GGIyDhlgGGF~RY-----StD~~WlvPHFEKMLyDnA~l~--- 279 (667)
T COG1331 212 PHLLLFLLRYSLRTGDERAL----DMVLRTLDAMARGGIYDHLGGGFFRY-----STDREWLVPHFEKMLYDNALLL--- 279 (667)
T ss_pred hHHHHHHHHHHHhhCCHHHH----HHHHHHHHHHHccCCccccCCceeee-----ecCCceechhHHHHHHHHHHHH---
Confidence 34688888999999995544 344555555432 34333344443 23456754 456678887765
Q ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hcc--CCeee
Q 002202 704 QAASALAREVGDRGSEDYFLFKFQKAKVVYEK-LWN--GSYFN 743 (954)
Q Consensus 704 ~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~-lWn--G~yy~ 743 (954)
++++++....|++. |+..++.....+.+ +|. |.||.
T Consensus 280 ~~y~~ay~~tgd~~----y~~~a~~i~~~l~rel~sp~ggFys 318 (667)
T COG1331 280 RAYAEAYRATGDDL----YRRAAEGILDYLLRELYSPEGGFYS 318 (667)
T ss_pred HHHHHHHHHhCCHH----HHHHHHHHHHHHHHHhcCCCCceee
Confidence 56667777788775 88899999999999 986 44776
No 57
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=32.81 E-value=72 Score=22.08 Aligned_cols=24 Identities=13% Similarity=0.062 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHcCChHHHHHHHH
Q 002202 825 GVTYAVAASMIHEDLADIGFQTAC 848 (954)
Q Consensus 825 g~~y~lAa~mi~~G~~eeA~~l~~ 848 (954)
...+.+|..+...|+.++|.++++
T Consensus 2 ~a~~~la~~~~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 2 RARLALARALLAQGDPDEAERLLR 25 (26)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHh
Confidence 356788999999999999998875
No 58
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism]
Probab=22.53 E-value=1.8e+02 Score=35.39 Aligned_cols=138 Identities=22% Similarity=0.338 Sum_probs=70.4
Q ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccCCeeeEcCCCCCCCcccccccchhhHHHHHhCCCC----------
Q 002202 704 QAASALAREVGDRGSEDYFLFKFQKAKVVYEKLWNGSYFNYDNSGSSQSSSIQADQLAGQWYARACGLLP---------- 773 (954)
Q Consensus 704 ~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~lWnG~yy~~D~~~~~~~~si~adqL~Gqw~a~~~GL~~---------- 773 (954)
--+.-|.++.||+. |++.| +.++.++|+-.-= .|-.+ +.|. -.-|+|.+..+|++.
T Consensus 203 lEFg~LSrLTGD~~----fE~vA---~~A~~~lW~~RS~-igLlG----n~id--V~tG~W~~~~sGIGAgiDSfyEYll 268 (622)
T KOG2429|consen 203 LEFGTLSRLTGDPK----FEKVA---RRALDALWSLRSG-IGLLG----NHID--VQTGEWTAPDSGIGAGIDSFYEYLL 268 (622)
T ss_pred eehhhhHHhhCCcH----HHHHH---HHHHHHHHhhcCC-CCccc----ceee--ccccceeccccccccchHHHHHHHH
Confidence 34566788999986 44443 4455568962110 11111 1121 124666666666652
Q ss_pred ----CCCHH----HHHHHHHHHHHhccccccCCcceeecCcCCCCcccCCCCccC-CccchHHHHHHHHHHHcCChHHHH
Q 002202 774 ----IVDED----KARSALKKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSR-EIWSGVTYAVAASMIHEDLADIGF 844 (954)
Q Consensus 774 ----ild~e----~~~saL~~v~~~n~~~~~~g~~G~~~g~~p~G~~~~~s~~s~-evW~g~~y~lAa~mi~~G~~eeA~ 844 (954)
++.++ .-..+.+++.++.- .+.+ ++|-..-+|.+-.+-.+|= .-|||+.- ..|++|.|.
T Consensus 269 K~yILfgd~e~lemf~ea~~ai~~y~r----~~~w-Y~~V~m~~G~v~~p~~dSLqAfwpGlqv-------LaGDvd~A~ 336 (622)
T KOG2429|consen 269 KGYILFGDPELLEMFNEAYEAIQKYTR----KGPW-YVNVNMDSGSVSLPWFDSLQAFWPGLQV-------LAGDVDDAI 336 (622)
T ss_pred HHheecCCHHHHHHHHHHHHHHHHHhh----cCCe-EEEEecCCCceehHHHhhHHhhccchhh-------hhcchHHHH
Confidence 12211 12333344433321 1211 2333334455443311221 46776533 349999998
Q ss_pred HHHHHHHHHHhcCCCCCcCCCCCccccCC
Q 002202 845 QTACGIYEAAWSGTGLGYAFQTPEAWNTD 873 (954)
Q Consensus 845 ~l~~~i~~~~~~~~g~G~~~~~PE~~~~~ 873 (954)
++..- |=.+|.+ +| .+||.||=.
T Consensus 337 ~~h~~-y~~vwkk--yG---~lPEryN~~ 359 (622)
T KOG2429|consen 337 RTHLM-YFSVWKK--YG---FLPERYNLA 359 (622)
T ss_pred HHHHH-HHHHHHH--cC---CCccccccc
Confidence 88665 5557888 56 799999864
No 59
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=21.39 E-value=1.9e+02 Score=22.33 Aligned_cols=29 Identities=10% Similarity=-0.114 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 002202 826 VTYAVAASMIHEDLADIGFQTACGIYEAA 854 (954)
Q Consensus 826 ~~y~lAa~mi~~G~~eeA~~l~~~i~~~~ 854 (954)
.-+.+|..+...|+.++|.++++.+....
T Consensus 3 ~~~~la~~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 3 AWLALARAYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 45678899999999999999998876643
No 60
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]
Probab=20.84 E-value=1.4e+03 Score=26.91 Aligned_cols=93 Identities=18% Similarity=0.102 Sum_probs=52.7
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHH--HhhCCCCCCCccCCCCCCCCCCCccccchhHH--HHHHHHHHHHHHHHHHH
Q 002202 636 YRDVVATGDKKFAKAVWPSVYVAMAYM--DQFDRDGDGMIENDGFPDQTYDTWSVSGISAY--SGGLWVAALQAASALAR 711 (954)
Q Consensus 636 yr~~~~TGD~~fL~~~wp~vk~al~~l--~~~D~DgDGL~e~~G~~dqTyD~w~~~G~say--~~~lw~aAL~aaa~mA~ 711 (954)
-+.....++. .+-+..++..+-. ..+|++..|++.. -+++-.+.....+ -+..| ++++..+|.
T Consensus 250 l~~a~~~~~~----~l~~~A~~lf~~a~~~g~d~~~gg~~~s------l~~D~~~~d~~~r~WpQ~E~---l~AA~ala~ 316 (388)
T COG2942 250 LDIARRRGRA----WLIEAARRLFDIAVADGWDPERGGAYYS------LDDDGSPHDRQQRLWPQTEA---LKAAVALAE 316 (388)
T ss_pred HHHHHHhchh----HHHHHHHHHHHHHHHhccCcccCeEEEE------ecCCCCcCCHHHhhChHHHH---HHHHHHHHh
Confidence 3334444553 3334444444432 2488877676631 1122244444454 36666 678888888
Q ss_pred HcCCcchHHHHHHHHHHHHHHHHH-hcc---CCeeeE
Q 002202 712 EVGDRGSEDYFLFKFQKAKVVYEK-LWN---GSYFNY 744 (954)
Q Consensus 712 ~LGd~~~A~~~~~~a~~~k~~~~~-lWn---G~yy~~ 744 (954)
..|. .++|.+.++|+-..+-. |=+ |.+|..
T Consensus 317 ~~~~---~~~y~~~~~R~~~~~~~hl~d~~~G~W~~~ 350 (388)
T COG2942 317 TTGA---RERYWQWYARAWDYLWWHLDDPEYGLWFDK 350 (388)
T ss_pred cCCc---hHHHHHHHHHHHHHHHHhcCCCcCCcchhh
Confidence 8775 36788888887766666 443 667664
Done!