Query 002203
Match_columns 954
No_of_seqs 574 out of 3641
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 18:51:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002203.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002203hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 2E-198 5E-203 1622.4 49.3 935 9-954 8-942 (942)
2 KOG0202 Ca2+ transporting ATPa 100.0 2E-144 5E-149 1232.4 57.1 822 18-850 3-970 (972)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-134 3E-139 1237.6 86.4 753 37-809 1-755 (755)
4 PRK10517 magnesium-transportin 100.0 3E-133 7E-138 1239.0 90.6 807 18-849 48-898 (902)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-133 7E-138 1253.7 89.5 818 15-850 3-1049(1053)
6 PRK15122 magnesium-transportin 100.0 2E-132 3E-137 1235.3 90.3 815 18-849 26-898 (903)
7 COG0474 MgtA Cation transport 100.0 3E-133 6E-138 1243.7 79.4 780 15-806 19-870 (917)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 8E-132 2E-136 1228.0 91.0 807 18-849 14-863 (867)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 5E-127 1E-131 1202.2 89.2 831 15-848 13-985 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 7E-126 1E-130 1182.1 89.6 801 17-849 2-883 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 1E-125 3E-130 1186.1 90.1 814 23-845 43-938 (941)
12 KOG0204 Calcium transporting A 100.0 2E-126 5E-131 1082.9 51.0 811 23-843 102-1003(1034)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 7E-117 2E-121 1103.3 83.6 779 66-847 1-917 (917)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 7E-118 1E-122 1012.4 31.8 844 4-849 23-1008(1019)
15 TIGR01657 P-ATPase-V P-type AT 100.0 3E-113 7E-118 1083.6 76.6 751 35-802 137-1022(1054)
16 TIGR01652 ATPase-Plipid phosph 100.0 6E-103 1E-107 993.1 69.0 786 50-852 1-1050(1057)
17 PLN03190 aminophospholipid tra 100.0 2.7E-98 6E-103 940.5 70.5 786 48-859 85-1151(1178)
18 PRK14010 potassium-transportin 100.0 6.4E-97 1E-101 877.0 58.7 545 68-670 28-588 (673)
19 PRK01122 potassium-transportin 100.0 3.2E-93 6.9E-98 846.2 62.5 536 68-659 29-581 (679)
20 TIGR01497 kdpB K+-transporting 100.0 1.4E-88 3.1E-93 804.5 60.9 538 68-660 28-583 (675)
21 KOG0208 Cation transport ATPas 100.0 2.7E-88 5.9E-93 781.3 54.0 652 25-691 148-955 (1140)
22 KOG0206 P-type ATPase [General 100.0 7.2E-91 1.6E-95 843.3 28.5 793 46-857 28-1085(1151)
23 COG2217 ZntA Cation transport 100.0 1.7E-84 3.6E-89 770.8 59.0 502 99-664 175-678 (713)
24 PRK11033 zntA zinc/cadmium/mer 100.0 4E-80 8.7E-85 755.0 59.2 499 97-663 205-706 (741)
25 TIGR01494 ATPase_P-type ATPase 100.0 2.7E-78 5.8E-83 715.7 55.2 474 105-666 3-482 (499)
26 KOG0210 P-type ATPase [Inorgan 100.0 5.6E-79 1.2E-83 677.1 42.4 762 45-855 74-1047(1051)
27 KOG0207 Cation transport ATPas 100.0 2.7E-79 5.9E-84 708.5 39.9 539 95-688 337-888 (951)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 1.1E-75 2.5E-80 699.8 59.7 516 77-663 4-525 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 8.8E-76 1.9E-80 696.5 55.4 498 77-663 4-504 (536)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 5.4E-75 1.2E-79 692.0 59.1 506 97-679 53-560 (562)
31 PRK10671 copA copper exporting 100.0 7.3E-74 1.6E-78 713.3 61.1 519 98-680 285-808 (834)
32 KOG0209 P-type ATPase [Inorgan 100.0 4E-72 8.7E-77 633.1 49.2 571 22-611 148-832 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 3.6E-62 7.7E-67 531.2 36.1 520 69-644 29-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.3E-35 4.9E-40 314.9 25.3 222 103-324 1-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 3E-26 6.5E-31 241.2 12.2 211 328-605 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 8.8E-15 1.9E-19 134.3 10.7 123 483-636 20-145 (152)
37 PF00690 Cation_ATPase_N: Cati 99.4 7.8E-13 1.7E-17 113.1 7.6 67 19-85 1-69 (69)
38 PF00689 Cation_ATPase_C: Cati 99.2 2.5E-10 5.4E-15 117.3 15.1 166 673-845 1-182 (182)
39 KOG4383 Uncharacterized conser 99.2 1E-08 2.3E-13 116.3 26.4 209 481-689 814-1129(1354)
40 smart00831 Cation_ATPase_N Cat 99.1 2.1E-10 4.5E-15 96.6 6.8 60 30-89 2-63 (64)
41 TIGR02137 HSK-PSP phosphoserin 98.9 7E-09 1.5E-13 108.2 11.7 131 493-640 68-198 (203)
42 PRK11133 serB phosphoserine ph 98.8 1.4E-08 2.9E-13 113.2 10.9 131 493-637 181-315 (322)
43 TIGR00338 serB phosphoserine p 98.8 1.5E-08 3.2E-13 107.3 10.5 129 493-636 85-218 (219)
44 PF13246 Hydrolase_like2: Puta 98.8 1E-08 2.2E-13 92.6 6.7 65 375-440 20-90 (91)
45 PRK01158 phosphoglycolate phos 98.7 1.3E-07 2.9E-12 100.8 12.0 153 486-638 12-226 (230)
46 TIGR01487 SPP-like sucrose-pho 98.7 8.8E-08 1.9E-12 101.2 10.3 143 493-635 18-213 (215)
47 TIGR02726 phenyl_P_delta pheny 98.6 1.4E-07 2.9E-12 95.4 10.4 100 500-629 41-142 (169)
48 COG0561 Cof Predicted hydrolas 98.6 3E-07 6.6E-12 100.3 13.4 154 486-639 12-259 (264)
49 TIGR01670 YrbI-phosphatas 3-de 98.6 1.3E-07 2.9E-12 94.4 9.4 97 501-629 36-136 (154)
50 PRK10513 sugar phosphate phosp 98.6 2.4E-07 5.2E-12 101.4 12.3 66 573-638 196-265 (270)
51 PRK15126 thiamin pyrimidine py 98.6 2.9E-07 6.2E-12 101.0 11.3 66 573-638 188-259 (272)
52 COG0560 SerB Phosphoserine pho 98.5 3.1E-07 6.7E-12 96.4 10.1 110 492-615 76-190 (212)
53 TIGR01482 SPP-subfamily Sucros 98.5 4.8E-07 1E-11 96.1 11.7 140 493-632 15-212 (225)
54 PRK10976 putative hydrolase; P 98.5 6.6E-07 1.4E-11 97.8 10.6 66 573-638 190-261 (266)
55 PRK13582 thrH phosphoserine ph 98.4 1.4E-06 2.9E-11 91.2 11.4 127 493-637 68-195 (205)
56 PRK09484 3-deoxy-D-manno-octul 98.4 7.5E-07 1.6E-11 91.6 9.2 108 500-639 55-170 (183)
57 PF08282 Hydrolase_3: haloacid 98.4 9.6E-07 2.1E-11 94.7 9.6 146 492-637 14-254 (254)
58 PLN02887 hydrolase family prot 98.4 2E-06 4.4E-11 102.6 12.3 52 587-638 525-576 (580)
59 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1.1E-06 2.4E-11 91.4 9.0 117 493-622 80-200 (201)
60 PRK08238 hypothetical protein; 98.4 8.7E-05 1.9E-09 87.2 25.2 100 493-617 72-171 (479)
61 PRK10530 pyridoxal phosphate ( 98.3 2.4E-06 5.3E-11 93.5 11.3 66 573-638 199-268 (272)
62 TIGR03333 salvage_mtnX 2-hydro 98.3 4.6E-06 1E-10 88.1 11.6 135 492-637 69-208 (214)
63 TIGR00099 Cof-subfamily Cof su 98.3 3.7E-06 8E-11 91.3 10.7 64 573-636 188-255 (256)
64 PF12710 HAD: haloacid dehalog 98.3 1.2E-06 2.7E-11 90.3 6.6 92 496-602 92-192 (192)
65 KOG1615 Phosphoserine phosphat 98.2 2.7E-06 5.9E-11 84.5 7.5 109 494-611 89-199 (227)
66 TIGR01486 HAD-SF-IIB-MPGP mann 98.2 1.5E-05 3.2E-10 86.7 12.8 66 573-638 176-253 (256)
67 PRK03669 mannosyl-3-phosphogly 98.1 2.4E-05 5.2E-10 85.8 13.0 67 573-639 187-266 (271)
68 PLN02954 phosphoserine phospha 98.1 2.7E-05 5.8E-10 82.7 12.4 131 493-635 84-221 (224)
69 COG1778 Low specificity phosph 98.1 8.4E-06 1.8E-10 78.6 7.4 114 500-645 42-163 (170)
70 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.7E-05 3.8E-10 81.4 9.0 113 492-609 71-186 (188)
71 PRK00192 mannosyl-3-phosphogly 98.0 4.3E-05 9.3E-10 83.9 12.4 66 573-638 190-267 (273)
72 PRK09552 mtnX 2-hydroxy-3-keto 97.9 4.5E-05 9.7E-10 80.9 10.3 133 493-637 74-212 (219)
73 TIGR01488 HAD-SF-IB Haloacid D 97.9 2E-05 4.3E-10 80.2 7.1 101 493-604 73-177 (177)
74 PRK13222 phosphoglycolate phos 97.8 0.00012 2.5E-09 77.8 11.0 125 492-639 92-223 (226)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 5.7E-05 1.2E-09 78.8 8.1 109 491-611 85-197 (202)
76 cd01427 HAD_like Haloacid deha 97.7 0.0001 2.3E-09 70.5 7.6 118 489-609 20-138 (139)
77 COG0546 Gph Predicted phosphat 97.6 0.00028 6.1E-09 74.9 10.8 126 491-637 87-217 (220)
78 TIGR01454 AHBA_synth_RP 3-amin 97.6 0.00038 8.3E-09 72.8 10.2 124 493-637 75-203 (205)
79 TIGR01485 SPP_plant-cyano sucr 97.4 0.00092 2E-08 72.3 10.7 147 492-638 20-244 (249)
80 TIGR02461 osmo_MPG_phos mannos 97.4 0.00071 1.5E-08 72.0 9.4 43 491-533 13-55 (225)
81 PRK13223 phosphoglycolate phos 97.3 0.0012 2.6E-08 72.4 10.5 125 492-637 100-229 (272)
82 PRK13288 pyrophosphatase PpaX; 97.2 0.0014 3.1E-08 69.0 9.7 124 493-637 82-210 (214)
83 TIGR02471 sucr_syn_bact_C sucr 97.2 0.00042 9.1E-09 74.3 5.3 67 572-638 158-232 (236)
84 TIGR01449 PGP_bact 2-phosphogl 97.1 0.0017 3.6E-08 68.2 8.6 119 493-634 85-210 (213)
85 TIGR02463 MPGP_rel mannosyl-3- 97.1 0.0033 7.2E-08 66.5 10.8 38 496-533 19-56 (221)
86 PRK10187 trehalose-6-phosphate 96.9 0.0025 5.4E-08 69.6 8.5 132 493-628 36-233 (266)
87 TIGR01544 HAD-SF-IE haloacid d 96.9 0.01 2.2E-07 64.5 12.8 132 492-637 120-273 (277)
88 PRK10826 2-deoxyglucose-6-phos 96.8 0.0041 8.8E-08 66.0 9.0 119 492-634 91-216 (222)
89 TIGR03351 PhnX-like phosphonat 96.8 0.0054 1.2E-07 64.8 9.7 122 492-635 86-217 (220)
90 PRK13226 phosphoglycolate phos 96.8 0.0054 1.2E-07 65.4 9.5 124 493-637 95-224 (229)
91 PRK13225 phosphoglycolate phos 96.8 0.0091 2E-07 65.5 11.2 118 493-637 142-267 (273)
92 PRK11590 hypothetical protein; 96.6 0.0094 2E-07 62.8 9.6 107 493-612 95-203 (211)
93 PRK14502 bifunctional mannosyl 96.5 0.012 2.6E-07 70.9 10.3 48 486-533 425-473 (694)
94 PRK13478 phosphonoacetaldehyde 96.5 0.019 4.1E-07 62.8 11.2 93 493-606 101-197 (267)
95 PLN02382 probable sucrose-phos 96.4 0.0046 9.9E-08 71.8 6.4 65 573-637 175-256 (413)
96 TIGR01545 YfhB_g-proteo haloac 96.4 0.011 2.4E-07 62.2 8.7 106 493-611 94-201 (210)
97 PRK12702 mannosyl-3-phosphogly 96.4 0.028 6.1E-07 61.2 11.7 42 493-534 18-59 (302)
98 TIGR01548 HAD-SF-IA-hyp1 haloa 96.4 0.0047 1E-07 64.2 5.6 94 491-604 104-197 (197)
99 PLN03243 haloacid dehalogenase 96.4 0.018 3.8E-07 62.8 10.1 120 493-633 109-230 (260)
100 TIGR01422 phosphonatase phosph 96.4 0.021 4.5E-07 61.8 10.7 94 493-607 99-196 (253)
101 TIGR01484 HAD-SF-IIB HAD-super 96.2 0.015 3.2E-07 60.8 7.9 39 493-531 17-55 (204)
102 PRK06698 bifunctional 5'-methy 96.1 0.018 3.9E-07 68.2 9.3 123 493-639 330-455 (459)
103 PLN02770 haloacid dehalogenase 96.1 0.037 8E-07 59.8 10.7 117 493-628 108-228 (248)
104 COG4030 Uncharacterized protei 96.0 0.044 9.6E-07 56.3 10.0 141 494-638 84-262 (315)
105 PRK14501 putative bifunctional 96.0 0.053 1.1E-06 68.0 13.1 163 449-628 481-713 (726)
106 PRK11587 putative phosphatase; 95.9 0.034 7.4E-07 58.8 9.4 115 493-627 83-199 (218)
107 TIGR01672 AphA HAD superfamily 95.9 0.015 3.2E-07 62.2 6.4 89 493-607 114-206 (237)
108 TIGR02253 CTE7 HAD superfamily 95.9 0.024 5.2E-07 59.8 8.0 97 493-611 94-195 (221)
109 COG4359 Uncharacterized conser 95.9 0.018 3.8E-07 57.4 6.2 111 493-609 73-183 (220)
110 PRK11009 aphA acid phosphatase 95.8 0.025 5.3E-07 60.5 7.5 87 493-607 114-206 (237)
111 PHA02530 pseT polynucleotide k 95.7 0.031 6.7E-07 62.2 8.1 108 490-608 184-292 (300)
112 PRK08942 D,D-heptose 1,7-bisph 95.5 0.078 1.7E-06 54.3 9.9 127 493-637 29-176 (181)
113 TIGR01428 HAD_type_II 2-haloal 95.4 0.045 9.7E-07 56.8 7.8 94 493-607 92-187 (198)
114 PLN02779 haloacid dehalogenase 95.3 0.062 1.3E-06 59.4 8.8 116 493-626 144-263 (286)
115 PF13419 HAD_2: Haloacid dehal 95.1 0.021 4.6E-07 57.1 4.3 97 492-607 76-172 (176)
116 TIGR01990 bPGM beta-phosphoglu 95.1 0.034 7.4E-07 56.8 5.7 91 493-607 87-180 (185)
117 TIGR01662 HAD-SF-IIIA HAD-supe 95.1 0.075 1.6E-06 51.2 7.8 92 492-606 24-125 (132)
118 TIGR02254 YjjG/YfnB HAD superf 94.8 0.072 1.6E-06 56.2 7.4 119 493-635 97-222 (224)
119 PRK06769 hypothetical protein; 94.7 0.091 2E-06 53.5 7.4 99 494-610 29-135 (173)
120 TIGR01509 HAD-SF-IA-v3 haloaci 94.6 0.1 2.2E-06 53.0 7.7 94 493-606 85-178 (183)
121 PF05116 S6PP: Sucrose-6F-phos 94.6 0.089 1.9E-06 56.8 7.6 45 572-616 164-212 (247)
122 PTZ00174 phosphomannomutase; P 94.6 0.027 5.9E-07 60.8 3.6 54 572-625 187-245 (247)
123 PRK14988 GMP/IMP nucleotidase; 94.5 0.082 1.8E-06 56.2 7.0 99 493-612 93-195 (224)
124 PLN02575 haloacid dehalogenase 94.5 0.16 3.4E-06 58.1 9.5 118 493-633 216-337 (381)
125 smart00775 LNS2 LNS2 domain. T 94.4 0.24 5.1E-06 49.6 9.5 102 491-606 25-140 (157)
126 TIGR01685 MDP-1 magnesium-depe 94.4 0.11 2.4E-06 52.9 7.1 110 485-610 37-155 (174)
127 TIGR02009 PGMB-YQAB-SF beta-ph 94.3 0.07 1.5E-06 54.4 5.7 93 492-607 87-181 (185)
128 PLN02940 riboflavin kinase 94.1 0.15 3.1E-06 58.9 8.2 112 493-625 93-210 (382)
129 PRK09449 dUMP phosphatase; Pro 94.0 0.17 3.7E-06 53.5 8.0 120 493-637 95-222 (224)
130 COG2179 Predicted hydrolase of 93.4 0.54 1.2E-05 46.7 9.4 109 451-606 19-132 (175)
131 TIGR01656 Histidinol-ppas hist 93.0 0.22 4.7E-06 49.2 6.4 97 493-607 27-140 (147)
132 TIGR00213 GmhB_yaeD D,D-heptos 93.0 0.46 1E-05 48.4 9.0 26 494-519 27-52 (176)
133 TIGR02252 DREG-2 REG-2-like, H 92.5 0.29 6.3E-06 50.9 6.8 91 493-606 105-199 (203)
134 TIGR01668 YqeG_hyp_ppase HAD s 92.4 0.32 6.8E-06 49.4 6.7 107 455-607 20-131 (170)
135 TIGR01549 HAD-SF-IA-v1 haloaci 92.4 0.17 3.7E-06 50.0 4.7 91 493-605 64-154 (154)
136 PF06888 Put_Phosphatase: Puta 92.4 0.44 9.5E-06 50.8 8.0 102 493-601 71-186 (234)
137 TIGR01533 lipo_e_P4 5'-nucleot 91.6 0.88 1.9E-05 49.6 9.4 86 491-601 116-204 (266)
138 PRK05446 imidazole glycerol-ph 91.6 0.47 1E-05 53.8 7.5 97 492-608 29-144 (354)
139 TIGR01261 hisB_Nterm histidino 91.5 0.32 6.8E-06 48.9 5.4 98 493-610 29-145 (161)
140 TIGR00685 T6PP trehalose-phosp 91.3 0.32 7E-06 52.4 5.7 65 569-637 163-239 (244)
141 smart00577 CPDc catalytic doma 91.0 0.32 6.9E-06 48.1 4.9 93 492-609 44-139 (148)
142 PLN02811 hydrolase 91.0 0.44 9.6E-06 50.4 6.3 98 493-609 78-181 (220)
143 TIGR01459 HAD-SF-IIA-hyp4 HAD- 90.8 1.2 2.6E-05 47.9 9.5 94 486-605 17-115 (242)
144 PLN02919 haloacid dehalogenase 89.6 1.7 3.7E-05 56.7 11.0 125 493-637 161-291 (1057)
145 TIGR01691 enolase-ppase 2,3-di 89.1 0.78 1.7E-05 48.6 6.2 99 491-610 93-194 (220)
146 TIGR01675 plant-AP plant acid 88.7 2 4.3E-05 45.7 8.8 87 492-598 119-209 (229)
147 TIGR01681 HAD-SF-IIIC HAD-supe 88.5 1.2 2.5E-05 42.9 6.5 39 493-531 29-68 (128)
148 TIGR02247 HAD-1A3-hyp Epoxide 88.5 0.53 1.2E-05 49.2 4.5 97 492-607 93-191 (211)
149 COG3769 Predicted hydrolase (H 87.8 3.2 6.9E-05 43.1 9.1 37 497-533 27-63 (274)
150 PLN02205 alpha,alpha-trehalose 87.7 2.1 4.5E-05 54.4 9.7 67 450-529 586-653 (854)
151 TIGR01664 DNA-3'-Pase DNA 3'-p 87.5 1.6 3.5E-05 44.1 7.0 40 494-533 43-94 (166)
152 PLN02580 trehalose-phosphatase 85.5 1.5 3.2E-05 50.2 6.2 67 567-637 292-373 (384)
153 PLN03017 trehalose-phosphatase 85.1 14 0.0003 42.1 13.5 34 493-527 133-166 (366)
154 KOG3120 Predicted haloacid deh 84.6 4.2 9.2E-05 42.3 8.2 112 493-611 84-209 (256)
155 PRK09456 ?-D-glucose-1-phospha 84.6 2.6 5.5E-05 43.7 7.1 95 493-608 84-181 (199)
156 PF09419 PGP_phosphatase: Mito 84.6 3.1 6.6E-05 42.0 7.2 103 455-601 36-153 (168)
157 PRK10563 6-phosphogluconate ph 83.8 1.9 4.1E-05 45.4 5.7 97 493-610 88-184 (221)
158 PLN02645 phosphoglycolate phos 83.0 3.1 6.7E-05 46.6 7.4 47 486-532 37-86 (311)
159 PHA02597 30.2 hypothetical pro 82.4 2.5 5.5E-05 43.6 5.9 94 493-609 74-171 (197)
160 PF13344 Hydrolase_6: Haloacid 80.3 1.5 3.3E-05 40.3 3.0 48 486-533 7-57 (101)
161 TIGR01686 FkbH FkbH-like domai 78.3 4.5 9.7E-05 45.5 6.6 91 493-611 31-129 (320)
162 TIGR01993 Pyr-5-nucltdase pyri 77.6 2.7 5.8E-05 42.9 4.2 92 493-607 84-180 (184)
163 PRK10725 fructose-1-P/6-phosph 76.3 4.4 9.6E-05 41.2 5.4 90 498-607 92-181 (188)
164 TIGR01517 ATPase-IIB_Ca plasma 68.9 66 0.0014 41.9 14.7 30 275-304 327-356 (941)
165 KOG3040 Predicted sugar phosph 67.9 11 0.00023 39.0 5.6 47 483-529 13-59 (262)
166 COG0241 HisB Histidinol phosph 67.8 12 0.00026 38.3 6.1 98 494-610 32-146 (181)
167 COG0474 MgtA Cation transport 67.8 82 0.0018 40.8 15.0 270 19-306 42-330 (917)
168 PRK10444 UMP phosphatase; Prov 67.4 6.6 0.00014 42.4 4.4 45 486-530 10-54 (248)
169 TIGR01647 ATPase-IIIA_H plasma 65.7 87 0.0019 39.7 14.4 194 105-308 59-262 (755)
170 TIGR01458 HAD-SF-IIA-hyp3 HAD- 65.4 9.1 0.0002 41.5 5.1 48 486-533 10-64 (257)
171 PF03767 Acid_phosphat_B: HAD 64.7 12 0.00026 39.9 5.7 89 493-600 115-207 (229)
172 TIGR01684 viral_ppase viral ph 62.9 12 0.00026 41.2 5.2 41 494-534 146-187 (301)
173 TIGR01680 Veg_Stor_Prot vegeta 62.2 43 0.00093 36.6 9.2 31 491-521 143-173 (275)
174 PLN02423 phosphomannomutase 61.9 12 0.00026 40.4 5.1 43 572-615 188-235 (245)
175 PF08235 LNS2: LNS2 (Lipin/Ned 61.9 41 0.00088 33.6 8.3 103 492-607 26-141 (157)
176 PHA03398 viral phosphatase sup 61.8 13 0.00028 41.0 5.3 41 494-534 148-189 (303)
177 PLN02177 glycerol-3-phosphate 59.8 29 0.00063 41.5 8.2 121 494-635 111-242 (497)
178 COG3700 AphA Acid phosphatase 59.7 18 0.00038 36.5 5.2 90 494-610 115-210 (237)
179 TIGR01457 HAD-SF-IIA-hyp2 HAD- 59.3 16 0.00034 39.5 5.5 48 486-533 10-60 (249)
180 PRK10748 flavin mononucleotide 58.4 20 0.00043 38.3 6.1 91 493-610 113-206 (238)
181 COG0637 Predicted phosphatase/ 55.4 26 0.00055 37.1 6.2 100 492-610 85-184 (221)
182 PLN02151 trehalose-phosphatase 54.8 1.3E+02 0.0029 34.2 12.0 61 573-637 269-341 (354)
183 COG1011 Predicted hydrolase (H 54.1 38 0.00082 35.4 7.3 41 493-534 99-139 (229)
184 PTZ00445 p36-lilke protein; Pr 52.3 27 0.00058 36.6 5.4 62 445-519 28-101 (219)
185 cd04728 ThiG Thiazole synthase 50.4 3.6E+02 0.0077 29.1 15.6 52 478-529 89-143 (248)
186 PRK14194 bifunctional 5,10-met 50.2 68 0.0015 35.7 8.5 140 490-629 12-211 (301)
187 TIGR01493 HAD-SF-IA-v2 Haloaci 50.1 20 0.00044 35.8 4.3 84 493-604 90-175 (175)
188 TIGR02251 HIF-SF_euk Dullard-l 49.9 12 0.00026 37.6 2.5 43 490-533 39-81 (162)
189 PF13380 CoA_binding_2: CoA bi 47.2 15 0.00034 34.6 2.7 79 450-532 18-103 (116)
190 TIGR01458 HAD-SF-IIA-hyp3 HAD- 46.8 15 0.00033 39.8 2.9 118 496-636 123-253 (257)
191 TIGR01663 PNK-3'Pase polynucle 45.3 48 0.001 39.9 6.9 40 494-533 198-249 (526)
192 PF00122 E1-E2_ATPase: E1-E2 A 45.1 1.3E+02 0.0029 31.5 9.8 192 107-308 2-210 (230)
193 PRK00208 thiG thiazole synthas 44.3 4.4E+02 0.0096 28.4 15.9 53 477-529 88-143 (250)
194 TIGR01689 EcbF-BcbF capsule bi 44.3 24 0.00051 33.9 3.4 31 492-522 23-53 (126)
195 TIGR02244 HAD-IG-Ncltidse HAD 43.8 77 0.0017 36.0 7.9 37 495-531 186-223 (343)
196 TIGR01524 ATPase-IIIB_Mg magne 43.4 5.4E+02 0.012 33.3 16.4 20 143-162 152-171 (867)
197 TIGR00262 trpA tryptophan synt 43.4 92 0.002 33.8 8.2 41 490-530 121-163 (256)
198 PF05822 UMPH-1: Pyrimidine 5' 43.3 96 0.0021 33.4 8.1 134 492-637 89-241 (246)
199 PF10777 YlaC: Inner membrane 43.2 44 0.00095 32.7 4.9 49 785-840 33-81 (155)
200 TIGR01116 ATPase-IIA1_Ca sarco 42.9 7.5E+02 0.016 32.2 17.8 201 102-306 44-271 (917)
201 PF06738 DUF1212: Protein of u 42.6 1.1E+02 0.0024 31.4 8.4 85 13-116 58-143 (193)
202 COG0647 NagD Predicted sugar p 41.9 34 0.00074 37.4 4.6 47 484-530 15-61 (269)
203 PF03120 DNA_ligase_OB: NAD-de 41.8 14 0.00031 32.5 1.4 22 148-169 45-67 (82)
204 TIGR01657 P-ATPase-V P-type AT 41.1 1E+03 0.022 31.6 19.4 214 104-346 196-450 (1054)
205 PRK14188 bifunctional 5,10-met 40.9 1.1E+02 0.0023 34.1 8.3 138 490-627 10-208 (296)
206 TIGR01452 PGP_euk phosphoglyco 40.8 33 0.00072 37.6 4.4 48 486-533 11-61 (279)
207 TIGR01106 ATPase-IIC_X-K sodiu 40.5 3.9E+02 0.0084 35.2 14.7 20 156-175 149-168 (997)
208 PRK15122 magnesium-transportin 39.9 6E+02 0.013 33.0 16.1 36 142-178 174-209 (903)
209 CHL00200 trpA tryptophan synth 39.4 1.2E+02 0.0026 33.1 8.3 30 571-600 187-216 (263)
210 PRK11507 ribosome-associated p 39.4 33 0.00072 29.3 3.1 26 138-163 38-63 (70)
211 PTZ00174 phosphomannomutase; P 39.3 39 0.00084 36.3 4.6 40 486-525 14-54 (247)
212 TIGR01522 ATPase-IIA2_Ca golgi 39.0 4.5E+02 0.0097 34.1 14.8 32 275-306 275-306 (884)
213 COG5547 Small integral membran 38.1 1.5E+02 0.0033 24.1 6.3 49 65-121 2-52 (62)
214 PF12368 DUF3650: Protein of u 37.8 26 0.00056 24.2 1.8 15 35-49 13-27 (28)
215 PRK10517 magnesium-transportin 36.6 1E+03 0.023 30.9 17.5 91 100-195 121-213 (902)
216 PRK01122 potassium-transportin 36.0 4E+02 0.0087 33.3 13.0 82 99-189 63-147 (679)
217 PF13275 S4_2: S4 domain; PDB: 35.1 23 0.0005 29.8 1.5 24 138-161 34-57 (65)
218 PRK14179 bifunctional 5,10-met 34.6 1.4E+02 0.0031 32.8 8.0 138 490-627 10-208 (284)
219 TIGR01494 ATPase_P-type ATPase 33.7 1.8E+02 0.004 34.8 9.6 148 141-306 53-212 (499)
220 TIGR00612 ispG_gcpE 1-hydroxy- 33.6 77 0.0017 35.5 5.6 149 444-614 149-319 (346)
221 PF05975 EcsB: Bacterial ABC t 33.1 8.1E+02 0.018 28.2 18.1 22 644-665 13-34 (386)
222 PF04123 DUF373: Domain of unk 32.9 5.8E+02 0.013 29.0 12.6 19 502-520 57-77 (344)
223 PF06506 PrpR_N: Propionate ca 32.6 2.3E+02 0.0049 28.7 8.7 106 497-649 65-172 (176)
224 PRK09479 glpX fructose 1,6-bis 31.8 1E+02 0.0022 34.2 6.1 104 488-602 161-282 (319)
225 PLN02591 tryptophan synthase 31.1 2.1E+02 0.0046 30.9 8.5 81 496-598 118-201 (250)
226 COG1188 Ribosome-associated he 30.8 57 0.0012 29.9 3.4 31 136-167 33-63 (100)
227 PF12710 HAD: haloacid dehalog 29.6 26 0.00056 35.5 1.2 16 331-346 1-16 (192)
228 PRK14174 bifunctional 5,10-met 29.5 2E+02 0.0044 31.9 8.1 138 490-627 9-213 (295)
229 PRK05585 yajC preprotein trans 29.3 3.8E+02 0.0083 24.9 8.7 45 97-141 17-61 (106)
230 PRK14189 bifunctional 5,10-met 29.3 1.7E+02 0.0037 32.3 7.5 139 490-628 11-209 (285)
231 PF14336 DUF4392: Domain of un 29.0 91 0.002 34.6 5.4 37 496-532 63-100 (291)
232 PRK14184 bifunctional 5,10-met 28.9 2.1E+02 0.0046 31.6 8.1 138 490-627 9-211 (286)
233 cd01516 FBPase_glpX Bacterial 28.6 1.3E+02 0.0027 33.3 6.2 105 488-602 158-279 (309)
234 COG1024 CaiD Enoyl-CoA hydrata 28.3 2.4E+02 0.0053 30.3 8.6 102 485-629 15-128 (257)
235 COG0279 GmhA Phosphoheptose is 27.2 1.6E+02 0.0034 29.7 6.0 58 440-521 91-148 (176)
236 PF06570 DUF1129: Protein of u 26.9 7.3E+02 0.016 25.8 12.9 6 787-792 143-148 (206)
237 PF12689 Acid_PPase: Acid Phos 26.9 1E+02 0.0022 31.2 4.9 40 494-533 46-86 (169)
238 TIGR01456 CECR5 HAD-superfamil 26.6 2E+02 0.0043 32.3 7.7 49 485-533 8-64 (321)
239 PRK12415 fructose 1,6-bisphosp 26.3 1.4E+02 0.0031 33.2 6.1 105 488-602 159-280 (322)
240 PF01455 HupF_HypC: HupF/HypC 26.3 1.5E+02 0.0033 25.1 5.1 33 134-166 16-51 (68)
241 PF00389 2-Hacid_dh: D-isomer 26.2 5.6E+02 0.012 24.2 11.0 45 566-611 43-89 (133)
242 PF15584 Imm44: Immunity prote 25.8 33 0.00072 30.7 1.0 20 155-174 13-32 (94)
243 PRK00652 lpxK tetraacyldisacch 25.6 1.5E+02 0.0034 33.3 6.5 57 576-632 70-154 (325)
244 PRK15424 propionate catabolism 24.8 6.4E+02 0.014 30.6 11.9 102 497-645 95-197 (538)
245 TIGR02250 FCP1_euk FCP1-like p 24.3 1.1E+02 0.0023 30.5 4.5 42 491-533 56-97 (156)
246 PRK14175 bifunctional 5,10-met 23.8 1.2E+02 0.0027 33.4 5.2 45 490-534 11-64 (286)
247 PRK14169 bifunctional 5,10-met 23.2 1.4E+02 0.003 32.9 5.4 138 490-627 9-206 (282)
248 TIGR00330 glpX fructose-1,6-bi 23.2 1.9E+02 0.0041 32.0 6.3 38 488-527 158-195 (321)
249 TIGR01460 HAD-SF-IIA Haloacid 22.5 1.2E+02 0.0025 32.4 4.7 43 486-528 7-49 (236)
250 PRK14170 bifunctional 5,10-met 22.4 1.4E+02 0.003 32.9 5.2 45 490-534 10-63 (284)
251 TIGR00739 yajC preprotein tran 22.2 5E+02 0.011 23.0 7.8 24 118-141 23-46 (84)
252 KOG0205 Plasma membrane H+-tra 22.1 3.5 7.5E-05 49.1 -7.4 178 483-660 432-650 (942)
253 COG0272 Lig NAD-dependent DNA 21.9 1.5E+02 0.0031 36.5 5.6 67 148-224 363-432 (667)
254 PRK14178 bifunctional 5,10-met 21.6 3.3E+02 0.0071 30.0 7.9 64 564-627 129-202 (279)
255 COG1606 ATP-utilizing enzymes 21.3 5.5E+02 0.012 27.9 9.1 33 506-538 39-78 (269)
256 PRK04980 hypothetical protein; 21.0 1.4E+02 0.0031 27.6 4.1 66 134-204 18-90 (102)
257 PRK14191 bifunctional 5,10-met 20.8 1.5E+02 0.0033 32.7 5.1 138 490-627 9-207 (285)
258 PF09926 DUF2158: Uncharacteri 20.7 62 0.0013 26.1 1.6 12 154-165 2-13 (53)
259 TIGR01459 HAD-SF-IIA-hyp4 HAD- 20.4 63 0.0014 34.5 2.1 91 495-607 140-236 (242)
260 cd05017 SIS_PGI_PMI_1 The memb 20.3 1.5E+02 0.0032 27.8 4.4 36 495-532 56-91 (119)
261 PRK12821 aspartyl/glutamyl-tRN 20.3 1.4E+03 0.031 26.8 13.6 25 706-730 214-238 (477)
262 PRK10234 DNA-binding transcrip 20.1 6.4E+02 0.014 24.0 8.4 62 106-176 11-73 (118)
263 COG2179 Predicted hydrolase of 20.1 1.5E+02 0.0033 29.9 4.4 82 446-533 49-133 (175)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-198 Score=1622.36 Aligned_cols=935 Identities=87% Similarity=1.319 Sum_probs=921.0
Q ss_pred hhhhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 002203 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (954)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~aail~~~l 88 (954)
++++++|.+|++..|.|+|+++|+|+..|||++|+++|+++||+|+++++|++.+++|+.+||||++|+|++||++++.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeec
Q 002203 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (954)
Q Consensus 89 ~~~~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VP 168 (954)
.++++.+++|.|+++|+.++++|++++|+||++++++.++||+.++++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEeecCceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccCCCCcHHHHHHHH
Q 002203 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (954)
Q Consensus 169 aD~~ll~g~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i 248 (954)
||+||++|+.++||||+|||||.||.|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+|||+.++.|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCc
Q 002203 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (954)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v 328 (954)
+++|++++++++++.++++|+.+++.|+..+.+.+++++++||++||.++++++++|+.||+++|+++|+++|+|+|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCC
Q 002203 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (954)
Q Consensus 329 ~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~ 408 (954)
|++|+|||||||.|+++|++..++.+.++.++|+++..|+++++.+++|++|.|+++++.||++++.+|++++++||||+
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEe
Q 002203 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (954)
Q Consensus 409 ~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli 488 (954)
.||.+..|.++||++++++||||+.|+++|+.+.++++++++.+++||++|+|.|++|++..+++.++..+.+|+|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe
Q 002203 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (954)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 568 (954)
.+.||||+|+.++|++....|++|+|+|||+...|++++|++|+++|+|++..+.|.+.++.+...++++++++++.||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHH
Q 002203 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (954)
Q Consensus 569 vsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~ 648 (954)
++||||+++|+.||++||+|+|+|||+||+||||+||+|||+.+++|+|+.+|||||+++++|.|+.++..+|.+|+||+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 002203 649 NYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728 (954)
Q Consensus 649 ~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~ 728 (954)
+|.+|+++.++.++++++...+.|.|.|+|++++++.++||++.|++++|+++|+|.|++|+++++|..++++|.|++++
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHH
Q 002203 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (954)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (954)
+..+||..+.+.||+..||+.....+..+...+.|+++++.+++++|++|+++|+|.++|+++++++++.++++++++++
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888889999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccCcchHhHHHHHHHHHHHHHHHHHHHHHHhHhhcCCcchhhhhhccccccccccCChhhhHHHHHHHhhhhc
Q 002203 809 YANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLH 888 (954)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (954)
|.+|.|.+.++++|.|..++|++++..|+++++.|+..||.+++++|++.++++++++.+|+|++++|++||+.+||++|
T Consensus 808 ya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~ 887 (942)
T KOG0205|consen 808 YANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLH 887 (942)
T ss_pred HheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccCccccchhhHHHHHHHhhhHHHHHhhhhhccccchhhhhhcCCChhhhhhcccC
Q 002203 889 GLQPPETNGIFSDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954 (954)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (954)
+.++++ .+|++++++|+|||+|++||||+|++++|++|++|+||+|+|++ |||||
T Consensus 888 ~lq~~~----------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 888 GLQPPE----------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred ccCCCc----------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 999985 27899999999999999999999999999999999999999999 99997
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-144 Score=1232.37 Aligned_cols=822 Identities=29% Similarity=0.418 Sum_probs=679.8
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcc-cccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCC
Q 002203 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (954)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~-~~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~ 95 (954)
+.|..+.+|++..+.++ ++|||++|+.+|+++||+|+++.. ..+.|+++++||.||+..+|+++|++|+++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 55678999999999998 679999999999999999999865 5899999999999999999999999999997
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEee
Q 002203 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (954)
Q Consensus 96 ~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~ 175 (954)
.|.+++.|.+++++|++++++||+|+++++++|+++.|+.++|+|+|+.+.+++++|||||||.++-||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEeecccCCCcceecCCC--------------CcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCc
Q 002203 176 GDPLKIDQSALTGESLPVTKNPY--------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (954)
Q Consensus 176 g~~~~VdeS~LTGEs~pv~K~~~--------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~ 240 (954)
..++.||||+|||||.|+.|... |++|+||.|..|.++|+|+.||.+|++|++.+.++..+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 98899999999999999999542 57999999999999999999999999999999998875 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hhhc-------cccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhc
Q 002203 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV-------QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (954)
Q Consensus 241 ~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~-------~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~ 311 (954)
+|+.++.++..+.-.+.+..+..+++ .|+. +...+.+.|..+++|.+++||+|||+++++++++|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988652222222222222 2221 11445567888999999999999999999999999999999
Q ss_pred CCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecc-----------cCC------------------ChH-
Q 002203 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------KGV------------------EKE- 361 (954)
Q Consensus 312 ~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~-----------~~~------------------~~~- 361 (954)
++++||++.++|+||.+++||||||||||+|+|++.++++.... .++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999987753110 001 111
Q ss_pred --HHHHHHHHHccc------c-----CcChHHHHHHHhcC-----Chhh--------------hhcCceEEEeecCCCCC
Q 002203 362 --HVILLAARASRT------E-----NQDAIDAAIVGMLA-----DPKE--------------ARAGVREVHFLPFNPVD 409 (954)
Q Consensus 362 --~~l~~a~~~~~~------~-----~~~~~~~ai~~~~~-----~~~~--------------~~~~~~~l~~~pF~s~~ 409 (954)
+++..++.|+.. . .++|+|.|+...+. +... ....++...++||+++|
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 223333333211 1 24788888876542 1110 11223445889999999
Q ss_pred cceEEEEEcCCCc--EEEEEcCcHHHHHHhhcC------------ChhHHHHHHHHHHHHHHcCCeEEEEEEeecCC---
Q 002203 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE--- 472 (954)
Q Consensus 410 kr~sv~~~~~~g~--~~~~~KGa~e~il~~c~~------------~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~--- 472 (954)
|+|++.+.++.|+ +..|.|||+|.|+++|+. ++..++.+.+...+|+++|||+|++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999953 34568899999999999999999999997763
Q ss_pred --------CCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCC--CCCCcc
Q 002203 473 --------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSSL 542 (954)
Q Consensus 473 --------~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l 542 (954)
..+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||.+|||++|+..+. .....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 1245678999999999999999999999999999999999999999999999999999997543 244567
Q ss_pred cCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEec-cchHHHHhcc
Q 002203 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (954)
Q Consensus 543 ~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg-~gtd~A~~aA 621 (954)
+|.+.+ .++++++++.+.+..+|||++|+||.+||++||++|++|||||||+||+||||+|||||||| +|||+||+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 777665 78999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCccHHHHHHHHHhhccc-ccccccCC
Q 002203 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 699 (954)
Q Consensus 622 DivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~d~ 699 (954)
|+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+..+++ .+|.++.|+.|+|+||+|+++|++ ++++++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 9999999999999999999999999999999999999977765544 567789999999999999999998 69999999
Q ss_pred CCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc----------CC------Chh
Q 002203 700 VKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------RT------RPD 756 (954)
Q Consensus 700 ~~~~---~~p~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~------~~~ 756 (954)
+++. .+|+++ ....++...+.+|+|+.+.++..|++.+... ......+.. .. ...
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~ 872 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDM 872 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhccc
Confidence 8764 223332 2345666667779999999986655443211 111100000 00 001
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCcccC---hhHHHHHHHHHHHHHHHHHHHhhc--ccccccCcchHhHHHHHHHH
Q 002203 757 EMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLY 831 (954)
Q Consensus 757 ~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 831 (954)
...|+.|..+++...++.+++|+...+.+.. .+.|+++++.++++... ..+|.+ ...+++.+++|.-|++++.+
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f-~ilYvp~l~~iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHF-LVLYVPPLQRIFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhh-eEEEechhhhhheecCCcHHHHHHHHHH
Confidence 2237788889999999999999987553321 23388888888876654 446654 22345777777666666888
Q ss_pred HHHHHHHHHHHHHHhHhhc
Q 002203 832 SLVTYFPLDILKFGIRYIL 850 (954)
Q Consensus 832 ~~~~~~~~~~~k~~~r~~~ 850 (954)
+..+++++|++|++.|++.
T Consensus 952 s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999775
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.5e-134 Score=1237.59 Aligned_cols=753 Identities=60% Similarity=0.948 Sum_probs=675.1
Q ss_pred CCCHHHHHHHHHhcCCCccCcccccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002203 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (954)
Q Consensus 37 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i~~ 116 (954)
|||++||++|+++||+|++++++++.|+.|+++|++|++|+|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999986 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecC
Q 002203 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (954)
Q Consensus 117 ~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~ 196 (954)
+||+++++++++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 002203 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (954)
Q Consensus 197 ~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (954)
+||.+|+||.|.+|+++++|++||.+|++|++++++++++ +++++|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998875 678999999999988765544433333333333246778
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecc
Q 002203 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (954)
Q Consensus 276 ~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 355 (954)
.+++..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+... ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred cCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCCCcceEEEEEcCC-CcEEEEEcCcHHHH
Q 002203 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (954)
Q Consensus 356 ~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~i 434 (954)
.+.++++++.+++.++....+||+|.|+++++.+....+..++.++++||+|.+|+|++++.+++ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23567788888887765566799999999987665545567888999999999999999887654 77888999999999
Q ss_pred HHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEE
Q 002203 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (954)
Q Consensus 435 l~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~m 514 (954)
+++|++..+.++++++.+++++.+|+|++++|+++ .|++|+|+|+++|+||||||++++|++|+++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998776777888899999999999999999973 2678999999999999999999999999999999999
Q ss_pred EccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCC
Q 002203 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (954)
Q Consensus 515 iTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG 594 (954)
+|||++.||.++|+++||.++.+....+...+..+.++++++++.+++.++|||++|+||+++|+.||++||+|+|||||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976544333333333334677889999999999999999999999999999999999999999
Q ss_pred ccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 002203 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF 674 (954)
Q Consensus 595 ~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~ 674 (954)
+||+||||+|||||||++|+|+||++||+||++|+|++|+.++++||++|+||++|+.|.++.|+..++.+++..+.+++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777777767788
Q ss_pred CccHHHHHHHHHhhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Q 002203 675 DFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754 (954)
Q Consensus 675 ~~~~~~il~i~l~~d~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 754 (954)
+++|+|++|+|+++|++.+++++|+++|+++|++|...+++..+++.|+++++.++.+||+.+...++...++. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999998999999999999999999999999999999999999999888776642222111111 113
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHh
Q 002203 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY 809 (954)
Q Consensus 755 ~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 809 (954)
..+.+|++|+.+++.+++++|++|+++.+|.++|++++++++++.++++++++.|
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~ 755 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAVY 755 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhhC
Confidence 4568899999999999999999999999999999999999999998888777643
No 4
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.4e-133 Score=1238.98 Aligned_cols=807 Identities=27% Similarity=0.406 Sum_probs=677.6
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccc-cHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCC
Q 002203 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (954)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~ 96 (954)
..+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4567899999999999999999999999999999999998765 67899999999999999999999999975
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeC------CeEEEEecCCcCCCcEEEEeCCCeeccc
Q 002203 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPAD 170 (954)
Q Consensus 97 ~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd------g~~~~I~~~~Lv~GDIV~l~~Gd~VPaD 170 (954)
+|.++++|++++++|..++++||+|+++++++|+++.+++++|+|| |++++|++++|||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred eEEeecCceEEEeecccCCCcceecCCCC-------------cccccceeecCeEEEEEEEecchhHHhhHHHhhhcc-C
Q 002203 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 236 (954)
Q Consensus 171 ~~ll~g~~~~VdeS~LTGEs~pv~K~~~~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~ 236 (954)
|+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||++++++++ .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCcee
Q 002203 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (954)
Q Consensus 237 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilv 316 (954)
+++++|+.+++++++++.+.++...+.+ +.+.+...+|.+++..++++++++|||+||++++++++.|+.+|+|+|++|
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~-~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVL-LINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 7899999999998776544433222222 222233457888999999999999999999999999999999999999999
Q ss_pred ccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHcccc--CcChHHHHHHHhcCCh--hh
Q 002203 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--KE 392 (954)
Q Consensus 317 k~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~ 392 (954)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999987531 12345567777776654432 3699999999876532 22
Q ss_pred hhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC----------ChhHHHHHHHHHHHHHHcCCeE
Q 002203 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRS 462 (954)
Q Consensus 393 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~i~~~a~~GlR~ 462 (954)
....++.++++||||.+|+|++++.+.++.+..++|||||.|+++|+. +++.++++.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678899999999999999998877777889999999999999963 2234567778889999999999
Q ss_pred EEEEEeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC
Q 002203 463 LGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539 (954)
Q Consensus 463 L~vA~~~~~~~~~---~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 539 (954)
+++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998764321 12378999999999999999999999999999999999999999999999999999953 3
Q ss_pred CcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHh
Q 002203 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 619 (954)
Q Consensus 540 ~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~ 619 (954)
.+++|.+.+ .++++++++.+++.+||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 466676655 6888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHhhcccccccccC
Q 002203 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 698 (954)
Q Consensus 620 aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~d~~~~~l~~d 698 (954)
+||+||++|||++|+.+|++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988887777666667 6999999999999999878999999
Q ss_pred CCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHHhh
Q 002203 699 RVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFV 776 (954)
Q Consensus 699 ~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~i~~ 776 (954)
+++++. +|++|+...+...+++.|++.+++++..|++++.. ++... .......++..|+.+.+++.+++|+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 999874 68889888888888888999888887766665421 11100 0011234566799999999999999
Q ss_pred hccCC-CCcccChhHHHHHHHHHHHHHHHHHHHhhcccccccCcch--HhHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 002203 777 TRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCG--WGWAGVIWLYSLVTYFPLDILKFGIRYI 849 (954)
Q Consensus 777 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 849 (954)
+|+++ ++|.+++.+..+++.++.+++..++++..-.+++++.+++ +..|+++++++.. ++.++.|.+..+.
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~ 898 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRR 898 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 99987 4555555544444444444443333310112345566666 3333333333333 5678887654433
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3.3e-133 Score=1253.73 Aligned_cols=818 Identities=26% Similarity=0.396 Sum_probs=672.0
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCC
Q 002203 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG 92 (954)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~ 92 (954)
|--|||..+.+|+++.|+++ .+|||++||++|+++||+|+++.++ .++|+.|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 44589999999999999998 5899999999999999999999875 688999999999999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceE
Q 002203 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (954)
Q Consensus 93 ~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ 172 (954)
+|.++++|++++++|+.++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCceEEEeecccCCCcceecCCC---------------CcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-
Q 002203 173 LLEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (954)
Q Consensus 173 ll~g~~~~VdeS~LTGEs~pv~K~~~---------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~- 236 (954)
|++++++.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|++|||++++++.+
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998999999999999999999642 57899999999999999999999999999999886432
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHH
Q 002203 237 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281 (954)
Q Consensus 237 -----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (954)
.++|+|+.++++++++.++.++..++.+++.+ . ..+.+.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~--~-~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK--F-DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--h-hhhHHHHHH
Confidence 13899999999998754433332222222111 1 122466778
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeee---c----
Q 002203 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV---F---- 354 (954)
Q Consensus 282 ~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~---~---- 354 (954)
+++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+.+... +
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 899999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred -ccCCC----------------------------------------h--------HHHHHHHHHHccc------------
Q 002203 355 -AKGVE----------------------------------------K--------EHVILLAARASRT------------ 373 (954)
Q Consensus 355 -~~~~~----------------------------------------~--------~~~l~~a~~~~~~------------ 373 (954)
..+++ + .+++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 00000 0 1244444444321
Q ss_pred cCcChHHHHHHHhcCCh----------hhh-------------------hcCceEEEeecCCCCCcceEEEEEcCCC-cE
Q 002203 374 ENQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NW 423 (954)
Q Consensus 374 ~~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~ 423 (954)
..+||+|.|++.++... .+. ...+++++.+||||.+|||+++++++++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12599999998875310 011 2347889999999999999999987655 47
Q ss_pred EEEEcCcHHHHHHhhcC------------ChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC------------CCCCC
Q 002203 424 HRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPG 479 (954)
Q Consensus 424 ~~~~KGa~e~il~~c~~------------~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~------------~~~~e 479 (954)
++|+|||||.|+++|+. +++.++++.+.+++|+++|+|||++||+.+++.+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 89999999999999963 2234677888999999999999999999886432 23468
Q ss_pred CCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC--------CCCcccCccccccc
Q 002203 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQDKDASI 551 (954)
Q Consensus 480 ~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--------~~~~l~g~~~~~~~ 551 (954)
++|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.++|+++||.++.. ...+++|.+.+ .+
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-AL 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hc
Confidence 8999999999999999999999999999999999999999999999999999964311 12355665554 67
Q ss_pred CcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEec-cchHHHHhccCEEEcCCCc
Q 002203 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 630 (954)
Q Consensus 552 ~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg-~gtd~A~~aADivL~~~~~ 630 (954)
+++++++++++..||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 778899999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHhhccc-ccccccCCCCCC
Q 002203 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS 703 (954)
Q Consensus 631 ~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~------~~~~~~~~il~i~l~~d~~-~~~l~~d~~~~~ 703 (954)
++|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++||+|+|++|+|+++|++ ++++++|++++.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999998877776655542 3689999999999999976 699999987654
Q ss_pred -----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--------cccccccCCChhHHHHHHHHHHHH
Q 002203 704 -----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD--------AFGVRSLRTRPDEMMAALYLQVSI 768 (954)
Q Consensus 704 -----~~p--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~t~~f~~~~~ 768 (954)
|++ ++...+.++...+++|+++++.+++.|++.+.. +..+ .++.. . ....+.+|++|.++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAG-C-NDVFKARSAAFATMTF 948 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccc-c-cchhhhHHHHHHHHHH
Confidence 221 122234566667788999999888776654321 1000 00000 0 1234678999999999
Q ss_pred HHHHHHhhhccCCCCc--------------------ccChhHHHHHHHHHHHHHHHHHHHhhc-c--cccccCcchHhHH
Q 002203 769 ISQALIFVTRSRSWSF--------------------IERPGLLLATAFVIAQLVATFIAVYAN-W--SFARIEGCGWGWA 825 (954)
Q Consensus 769 ~~~~~i~~~r~~~~~~--------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~ 825 (954)
++.+++|++|+.+.+. ++|+ +++++++++.++.. +.+|.+ . .++.+.+++|.|+
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~--~l~~~~~~~~~l~~-~~~~~p~~~~~~f~~~~l~~~w~ 1025 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENK--FLAWAIAFAAVSAF-PTIYIPVINDDVFKHKPIGAEWG 1025 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCH--HHHHHHHHHHHHHH-HHHhhhhhhhhhhccCCcchHHH
Confidence 9999999999975321 2344 67777776665543 335543 2 2566777888766
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhc
Q 002203 826 GVIWLYSLVTYFPLDILKFGIRYIL 850 (954)
Q Consensus 826 ~~~~~~~~~~~~~~~~~k~~~r~~~ 850 (954)
+ +++++++.++..|++|++.|++.
T Consensus 1026 ~-~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1026 L-AAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhcc
Confidence 5 47788888899999999877553
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.5e-132 Score=1235.30 Aligned_cols=815 Identities=26% Similarity=0.409 Sum_probs=677.9
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcC----C
Q 002203 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG----G 92 (954)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~aail~~~l~~~----~ 92 (954)
..|..+.+|+++.|+++.+|||++||++|+++||+|++++++ .++|+.|++||++|+.++|+++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 456789999999999999999999999999999999999766 56889999999999999999999999997521 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeC------CeEEEEecCCcCCCcEEEEeCCCe
Q 002203 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDI 166 (954)
Q Consensus 93 ~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd------g~~~~I~~~~Lv~GDIV~l~~Gd~ 166 (954)
+...+|.++++|++++++|+.++++||++++++.++|+++.+++++|+|| |++++|++++|||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 23358999999999999999999999999999999999999999999999 489999999999999999999999
Q ss_pred eccceEEeecCceEEEeecccCCCcceecCC-----------------------CCcccccceeecCeEEEEEEEecchh
Q 002203 167 VPADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVHT 223 (954)
Q Consensus 167 VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~-----------------------~~~v~~Gs~v~~G~~~~~V~~tG~~T 223 (954)
|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999889999999999999999975 26899999999999999999999999
Q ss_pred HHhhHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q 002203 224 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303 (954)
Q Consensus 224 ~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~ 303 (954)
++||+++++.+.+.++++|+.++++++++..+..+++.+ +++.......++.+++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~-v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPV-VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 999999999886677899999999887654333222222 1222222346788899999999999999999999999999
Q ss_pred HHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHccc--cCcChHHH
Q 002203 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDA 381 (954)
Q Consensus 304 ~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ 381 (954)
.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ..+||+|.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 999999999999999999999999999999999999999999988652 2234456677776654332 23599999
Q ss_pred HHHHhcCCh--hhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC----------ChhHHHHHH
Q 002203 382 AIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVH 449 (954)
Q Consensus 382 ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~ 449 (954)
|++.++... ......++.++++||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 999887532 12234678899999999999999999877888899999999999999963 223456778
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCC-----CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH
Q 002203 450 AVIDKFAERGLRSLGVARQEIPEKTK-----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 524 (954)
Q Consensus 450 ~~i~~~a~~GlR~L~vA~~~~~~~~~-----~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~ 524 (954)
+.+++++.+|+|++++||++++..+. +..|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 88899999999999999998765321 2357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhC
Q 002203 525 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (954)
Q Consensus 525 ~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~A 604 (954)
++|+++||.. ...++|.+.+ .++++++.+.+++.+||||++|+||+++|+.||++|++|+|||||+||+||||+|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 3456676655 6888999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHH
Q 002203 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLI 683 (954)
Q Consensus 605 dVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il~ 683 (954)
|||||||+|||+||++||+||++|||++|+.++++||++|+||+||+.|.++.|+..++.+++..++.+ +|++|+|++|
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~ 736 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLL 736 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987776665555555 7999999999
Q ss_pred HHHhhcccccccccCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHH
Q 002203 684 IAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAA 761 (954)
Q Consensus 684 i~l~~d~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 761 (954)
+|+++|.+.+++++|+++++. +|++|+.+.+-..+++.|++.+++++..|++.+.. +. .+.. ......+|.
T Consensus 737 ~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~~---~~~~~~~t~ 809 (903)
T PRK15122 737 QNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANSV---EMQALFQSG 809 (903)
T ss_pred HHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCcH---hhhhhhHHH
Confidence 999999888999999998775 67778766555555567877777777665543311 00 0100 000134577
Q ss_pred HHHHHHHHHHHHHhhhccCC-CCcccChhHHHHHHHHHHHHHHHHHHH-hhcccccccCcchHhHHHHHHHHHHHHHHHH
Q 002203 762 LYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAV-YANWSFARIEGCGWGWAGVIWLYSLVTYFPL 839 (954)
Q Consensus 762 ~f~~~~~~~~~~i~~~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (954)
.|+.+++++.+++|++|+++ ++|.+++.+..+++.++.+++.+++++ .. ..++.+.++++.+|++++.++++++++.
T Consensus 810 ~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 888 (903)
T PRK15122 810 WFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPL-GAMVGLEPLPWSYFPWLAATLLGYCLVA 888 (903)
T ss_pred HHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987 444433433333333333333333322 01 1344677778777777778888888888
Q ss_pred HHHHHHhHhh
Q 002203 840 DILKFGIRYI 849 (954)
Q Consensus 840 ~~~k~~~r~~ 849 (954)
|+.|.+.++.
T Consensus 889 e~~k~~~~r~ 898 (903)
T PRK15122 889 QGMKRFYIRR 898 (903)
T ss_pred HHHHHHHhhh
Confidence 9888554433
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-133 Score=1243.75 Aligned_cols=780 Identities=32% Similarity=0.512 Sum_probs=661.6
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHhhhhhHHHHHHHHHHHHHHHHc
Q 002203 15 ESVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALAN 90 (954)
Q Consensus 15 ~~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~aail~~~l~~ 90 (954)
....||..+.+ ++...+.++ .+|||++|+.+|+++||+|++++.+ .+.|.+|+.||++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34567788888 999999887 6799999999999999999999655 688999999999999999999999999986
Q ss_pred CCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCe
Q 002203 91 GGGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDI 166 (954)
Q Consensus 91 ~~~~~~~~----~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~ 166 (954)
.| .++..|+.++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.+++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceEEeecCceEEEeecccCCCcceecCC--------------CCcccccceeecCeEEEEEEEecchhHHhhHHHhh
Q 002203 167 VPADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232 (954)
Q Consensus 167 VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~--------------~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~ 232 (954)
||||++|+++++++||||+|||||+|+.|.+ .|++|+||.+.+|++.++|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47889999999999999999999999999999999
Q ss_pred hcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhc
Q 002203 233 DST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (954)
Q Consensus 233 ~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~ 311 (954)
... ...+++|+.+++++.+++.+.++..++.+++.+...+.+|.+.+..++++++++||++||++++++++.|+.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 998 6899999999999988766555544443333333223348899999999999999999999999999999999999
Q ss_pred CCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCC------h---HHHHHHHHHHcc--cc------
Q 002203 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---EHVILLAARASR--TE------ 374 (954)
Q Consensus 312 ~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~~~l~~a~~~~~--~~------ 374 (954)
+++++|+++++|+||++|+||||||||||+|+|+|.++++..-....+ . ..++..++.|+. ..
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999998752011111 0 123444445542 22
Q ss_pred CcChHHHHHHHhcC------ChhhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC-------C
Q 002203 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------R 441 (954)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~-------~ 441 (954)
.+||+|.|++..+. +.......+++++++||||+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 36999999999874 3444556667899999999999999999977788999999999999999974 4
Q ss_pred hhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC----CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEcc
Q 002203 442 EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 517 (954)
Q Consensus 442 ~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~----~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTG 517 (954)
++.++.+++..++|+++|||+|++|||..+..+. +..|++|+|+|+++|+||||+|+++||+.|++|||+||||||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5667889999999999999999999998766544 578999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccC
Q 002203 518 DQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVND 597 (954)
Q Consensus 518 D~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~ND 597 (954)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||+||+||.+||+.||++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999987654333366676655 677789999999999999999999999999999999999999999999
Q ss_pred HHhhhhCCeeEEec-cchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-C
Q 002203 598 APALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IWK-F 674 (954)
Q Consensus 598 apALk~AdVGIamg-~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~-~ 674 (954)
|||||+|||||||| +|+|+||+|||+++++|+|++|+.+|+|||++|+|++|++.|.+++|+..++.++++.+ .++ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 89999999999999999999999999999999999999999999999987766666544 344 6
Q ss_pred CccHHHHHHHHHhhccc-ccccccCCCC------CCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 002203 675 DFSPFMVLIIAILNDGT-IMTISKDRVK------PSPQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDA 745 (954)
Q Consensus 675 ~~~~~~il~i~l~~d~~-~~~l~~d~~~------~~~~p~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 745 (954)
||+|+|++|+|+++|++ +++++.++++ |+..|.+ |+.+.++.+.+..|...++++++.|.+.+... ....
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~-~~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGF-IANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Confidence 89999999999999997 5777776532 2223554 66666666677778888888777666665321 1111
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccC---hhHHHHHHHHHHHHHHHHH
Q 002203 746 FGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFI 806 (954)
Q Consensus 746 ~g~~~~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~ 806 (954)
.+... .....+++.|+.++++++++.+.+|+.+.+|++. +++.+++++++..++..++
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~ 870 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLI 870 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHH
Confidence 11100 1556789999999999999999999987555443 4556666666555554444
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=7.9e-132 Score=1228.00 Aligned_cols=807 Identities=25% Similarity=0.390 Sum_probs=671.2
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCC
Q 002203 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (954)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~ 96 (954)
+.|..+.+++++.|+++.+|||++||++|+++||+|++++++ .++|+.|+++|++|++|+++++++++++++
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 456889999999999999999999999999999999998876 568899999999999999999999999975
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe------CCeEEEEecCCcCCCcEEEEeCCCeeccc
Q 002203 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPAD 170 (954)
Q Consensus 97 ~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R------dg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD 170 (954)
+|.++++|+++++++..+++++|+|++++.++|+++.+++++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred eEEeecCceEEEeecccCCCcceecCCCC-------------cccccceeecCeEEEEEEEecchhHHhhHHHhhhccCC
Q 002203 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237 (954)
Q Consensus 171 ~~ll~g~~~~VdeS~LTGEs~pv~K~~~~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~ 237 (954)
|+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+++++.+.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999988999999999999999999874 69999999999999999999999999999999988667
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceec
Q 002203 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (954)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk 317 (954)
++++|+.++++++++..++++...+. ++.+.+...+|.+++..++++++++|||+||++++++++.|+++|+|+|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVV-LMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHh-eehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 78999999999987655444322222 22222334578889999999999999999999999999999999999999999
Q ss_pred cCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHcccc--CcChHHHHHHHhcCCh--hhh
Q 002203 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--KEA 393 (954)
Q Consensus 318 ~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~ 393 (954)
+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++.+++.++... .+||+|.|++.++.+. ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 9999999999999999999999999999988641 22345566777766554432 3599999999887532 223
Q ss_pred hcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC----------ChhHHHHHHHHHHHHHHcCCeEE
Q 002203 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (954)
Q Consensus 394 ~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~i~~~a~~GlR~L 463 (954)
+..++.++.+||+|.+|+|++++.+.++.++.++||+||.++++|+. +++.++++++.+++++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45678889999999999999998876666789999999999999963 23445678888999999999999
Q ss_pred EEEEeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC
Q 002203 464 GVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (954)
Q Consensus 464 ~vA~~~~~~~~~---~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~ 540 (954)
++||++++..+. +..|++|+|+|+++|+||||+|++++|++|+++||+|+|+||||+.||.++|+++||.+ ..
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----ND 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CC
Confidence 999998765432 12478999999999999999999999999999999999999999999999999999963 24
Q ss_pred cccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhc
Q 002203 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (954)
Q Consensus 541 ~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~a 620 (954)
.++|.+.+ .++++++.+.+++.++|||++|+||+++|+.||++|++|+|||||+||+||||+||||||||+|+|+||++
T Consensus 559 v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred eeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 56666554 67788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHhhcccccccccCC
Q 002203 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKDR 699 (954)
Q Consensus 621 ADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~d~~~~~l~~d~ 699 (954)
||+||++|+|++|+.+|++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+++++++|+
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~ 717 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDK 717 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999988877766665555 79999999999999997789999999
Q ss_pred CCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHHhhh
Q 002203 700 VKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVT 777 (954)
Q Consensus 700 ~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~i~~~ 777 (954)
++++. +|++|+.+.+...+++.|++.+++++..|++++.... .... ......++..|+.+++++.+++|++
T Consensus 718 ~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~t~~f~~~~~~~~~~~~~~ 790 (867)
T TIGR01524 718 MDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------ANTV-EEQALFQSGWFVVGLLSQTLVVHMI 790 (867)
T ss_pred CChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccch-hhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 98874 5666877777777788899888777766655432110 0000 0122356888999999999999999
Q ss_pred ccCC-CCcccChhHHHHHHHHHHHHHHHHHHHhhcccccccCcchHhH--HHHHHHHHHHHHHHHHHHHHHhHhh
Q 002203 778 RSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGW--AGVIWLYSLVTYFPLDILKFGIRYI 849 (954)
Q Consensus 778 r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~r~~ 849 (954)
|+++ ++|.+++.+..+++.++.+++.++++...-..++.+.++++.| |++++.+++ .++.|+.|.+..+.
T Consensus 791 R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~--~~~~e~~k~~~~~~ 863 (867)
T TIGR01524 791 RTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY--MATMQLVKTFYIRR 863 (867)
T ss_pred CcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH--HHHHHHHHHHHHHh
Confidence 9987 4444333333333333333332222221001234455553332 222233333 36678888664443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=4.6e-127 Score=1202.21 Aligned_cols=831 Identities=23% Similarity=0.366 Sum_probs=676.3
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcC-
Q 002203 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG- 91 (954)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~aail~~~l~~~- 91 (954)
...|||..+.+++++.|+++ .+|||++||++|+++||+|+++.++ .+.|+.|+++|++|++++++++++++++....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 46789999999999999998 6699999999999999999998755 67889999999999999999999998875321
Q ss_pred -----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCe
Q 002203 92 -----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDI 166 (954)
Q Consensus 92 -----~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~ 166 (954)
.....+|.++++|++++++++.++++||+|+++++++|++..+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 112347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceEEeecCceEEEeecccCCCcceecCCCC----------cccccceeecCeEEEEEEEecchhHHhhHHHhhhcc-
Q 002203 167 VPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (954)
Q Consensus 167 VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~~----------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 235 (954)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|++|++++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988999999999999999998864 699999999999999999999999999999998776
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCce
Q 002203 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (954)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~il 315 (954)
.+++++|+.++++.+.+...+++..++ +++.+...+.+|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 467999999999988765444332222 2222233456788888999999999999999999999999999999999999
Q ss_pred eccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeec--c-c--------CCCh-----HHHHHHHHHHccc------
Q 002203 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A-K--------GVEK-----EHVILLAARASRT------ 373 (954)
Q Consensus 316 vk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~--~-~--------~~~~-----~~~l~~a~~~~~~------ 373 (954)
+|+++++|+||++++||||||||||+|+|+|.++++... . . ..+. +.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 999999999999999999999999999999998764211 0 0 0111 1345555555321
Q ss_pred ---------cCcChHHHHHHHhcC----ChhhhhcCceEEEeecCCCCCcceEEEEEcC--C-CcEEEEEcCcHHHHHHh
Q 002203 374 ---------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS--D-GNWHRASKGAPEQILAL 437 (954)
Q Consensus 374 ---------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~--~-g~~~~~~KGa~e~il~~ 437 (954)
..+||+|.|++.++. +..+.+..++.++.+||+|+||||++++... + +++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999998763 3445567788999999999999999887632 2 46789999999999999
Q ss_pred hcC----------ChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC--------C---CCCCCceEEEEeccCCCCCc
Q 002203 438 CNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------E---SPGAPWQLVGLLPLFDPPRH 496 (954)
Q Consensus 438 c~~----------~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~--------~---~~e~~l~~lGli~i~D~lr~ 496 (954)
|+. +++.++.+.+.+++|+++|+||+++||+.+++.+. + ..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 963 23456778889999999999999999998864321 1 23789999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcccCcccccccCcc
Q 002203 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQDKDASIAAL 554 (954)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~~~~~~ 554 (954)
|++++|++|+++||+|+|+|||++.||.++|+++|+.++... ..+++|.+.+ .++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~-~l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK-DMTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh-hCCHH
Confidence 999999999999999999999999999999999999643210 1244554443 56777
Q ss_pred cHHHHhhhcc--eEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEec-cchHHHHhccCEEEcCCCch
Q 002203 555 PVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 631 (954)
Q Consensus 555 ~~~~~~~~~~--vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg-~gtd~A~~aADivL~~~~~~ 631 (954)
++++.+++.. ||||++|+||++||+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||+||+||+|+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8888888765 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCccHHHHHHHHHhhccc-ccccccCCCCCCC---CC
Q 002203 632 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPSP---QP 706 (954)
Q Consensus 632 ~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~il~i~l~~d~~-~~~l~~d~~~~~~---~p 706 (954)
+|+.+|++||++|+|+++++.|.++.|+..++..+++.+ ..+.|++|+|++|+|+++|.+ ++++++|++++.- +|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 999999999999999999999999999987776666554 355689999999999999986 7999998876541 23
Q ss_pred Cchh-----HHHHH-HHHHHHHHHHHHHHHHHHHHHHh-cccccc-cccc---------cccCCC-------------hh
Q 002203 707 DSWK-----LKEIF-ATGVVLGSYLAIMTVVFFWLMRK-TDFFSD-AFGV---------RSLRTR-------------PD 756 (954)
Q Consensus 707 ~~~~-----~~~~~-~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~~ 756 (954)
.+++ .+..+ .+.+..|+++++..+++|++.+. .+|... .++. .+..+. ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 3221 12233 33456698999888877665442 122110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCcc--cChhHHHHHHHHHHHHHHHHHHHhhc--ccccccCcchHhHHHHHHHHH
Q 002203 757 EMMAALYLQVSIISQALIFVTRSRSWSFI--ERPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYS 832 (954)
Q Consensus 757 ~~~t~~f~~~~~~~~~~i~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 832 (954)
..+|++|.++++++.++++++|+++.+++ ..++.+++.++++.+++..++ .|.+ ..++++.+++|.+|+++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 46899999999999999999999764322 234446666666555554443 4433 345567788888888888888
Q ss_pred HHHHHHHHHHHHHhHh
Q 002203 833 LVTYFPLDILKFGIRY 848 (954)
Q Consensus 833 ~~~~~~~~~~k~~~r~ 848 (954)
++.++..++.|++.|+
T Consensus 970 ~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRR 985 (997)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888888999988765
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=6.7e-126 Score=1182.06 Aligned_cols=801 Identities=27% Similarity=0.402 Sum_probs=672.9
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCccCccc-ccHHHHHHHhh-hhhHHHHHHHHHHHHHHHHcCC
Q 002203 17 VDLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGG 92 (954)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~-~~~~~~il~~aail~~~l~~~~ 92 (954)
-+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 378999999999999998 56999 99999999999999999765 67889999999 9999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceE
Q 002203 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (954)
Q Consensus 93 ~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ 172 (954)
+|.+++.|++++++++.++++||+++++++++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCceEEEeecccCCCcceecCCCC--------------cccccceeecCeEEEEEEEecchhHHhhHHHhhhcc-CC
Q 002203 173 LLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 237 (954)
Q Consensus 173 ll~g~~~~VdeS~LTGEs~pv~K~~~~--------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~ 237 (954)
|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+|++++++++. ..
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999977999999999999999999863 799999999999999999999999999999999876 46
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceec
Q 002203 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (954)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk 317 (954)
++++|+.++++++++....++.+++.+++.| ..+.++.+.+..++++++++|||+||++++++++.++++|+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7999999999998765443332222223333 345678889999999999999999999999999999999999999999
Q ss_pred cCchhhhhcCceEEEeCCCCccccCceeeeeeeeee-cc---c--CC-------------------ChHHHHHHHHHHcc
Q 002203 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV-FA---K--GV-------------------EKEHVILLAARASR 372 (954)
Q Consensus 318 ~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~-~~---~--~~-------------------~~~~~l~~a~~~~~ 372 (954)
+++++|+||++|+||||||||||+|+|+|.+++... .. . ++ ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999999876421 00 0 00 01234555554443
Q ss_pred c--------cCcChHHHHHHHhcCC--hhhhhcCceEEEeecCCCCCcceEEEEEcC-CCcEEEEEcCcHHHHHHhhcC-
Q 002203 373 T--------ENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC- 440 (954)
Q Consensus 373 ~--------~~~~~~~~ai~~~~~~--~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~c~~- 440 (954)
. ..+||+|.|++.++.. .+..+..++.++.+||+|.+|||+++++.. +++++.++|||||.|+.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 1247999999988642 223344678899999999999999988753 567899999999999999963
Q ss_pred ----------ChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC
Q 002203 441 ----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV 510 (954)
Q Consensus 441 ----------~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI 510 (954)
+++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++|+++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 133456788889999999999999999975 46799999999999999999999999999999
Q ss_pred EEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEE
Q 002203 511 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (954)
Q Consensus 511 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m 590 (954)
+++|+|||++.||.++|+++||..+. ...+.|.+.+ .++++++++.+++..||||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997542 2345555544 67788899999999999999999999999999999999999
Q ss_pred ECCCccCHHhhhhCCeeEEec-cchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002203 591 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI- 668 (954)
Q Consensus 591 ~GDG~NDapALk~AdVGIamg-~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~- 668 (954)
||||+||+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|+++++.|.++.|+..++.+++.
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999998 799999999999999999999999999999999999999999999999766655443
Q ss_pred HHhhcCCccHHHHHHHHHhhccc-ccccccCCCCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002203 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTD 740 (954)
Q Consensus 669 ~~~~~~~~~~~~il~i~l~~d~~-~~~l~~d~~~~~---~~p~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 740 (954)
.+..+.|++|+|++|+|+++|++ ++++++|++++. .+|+++ ..+..+...++.|+++.+++++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 44567899999999999999988 589999887654 123322 234556666788999888877666543311
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHhhc--cccc
Q 002203 741 FFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFA 815 (954)
Q Consensus 741 ~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 815 (954)
+ ......+|++|.++++++.++.|++|+++.+++. ..+.++++++++..++..++ +|.+ ..++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1 0234567999999999999999999997654332 12346666666665554333 4432 2345
Q ss_pred ccCcchHhHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 002203 816 RIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYI 849 (954)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 849 (954)
.+.+++|..|+++++++++.++..+++|++.|.+
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6778888888888889999999999999887653
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.3e-125 Score=1186.13 Aligned_cols=814 Identities=22% Similarity=0.339 Sum_probs=664.7
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccCcccc-cHHHHHHHhhhhhHHHHHHHHHHHHHHHHc------CC
Q 002203 23 PIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALAN------GG 92 (954)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~il~~aail~~~l~~------~~ 92 (954)
..++++++|+++ ++||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999998 56999 999999999999999998765 778899999999999999999999999762 12
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccce
Q 002203 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (954)
Q Consensus 93 ~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~ 171 (954)
+...+|.++++|+++++++..+++++|++++++.++|++. .+++++|+|||++++|++++|||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 478999999999999999999999999999999999999
Q ss_pred EEeecCceEEEeecccCCCcceecCCCCc--ccccceeecCeEEEEEEEecchhHHhhHHHhhhccCCCCcHHHHHHHHH
Q 002203 172 RLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249 (954)
Q Consensus 172 ~ll~g~~~~VdeS~LTGEs~pv~K~~~~~--v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~ 249 (954)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|++||++++++.+++++++|+.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998875 9999999999999999999999999999999988767789999999988
Q ss_pred HHHHHHHHHHHHHHHH---Hhhhc---cc---------cchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCc
Q 002203 250 NFCICSIAVGIVAEII---IMYPV---QH---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (954)
Q Consensus 250 ~~~~~~i~~~~~~~~~---~~~~~---~~---------~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~i 314 (954)
+++...+++..++.++ +.|.. .. .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7754332221111111 11111 11 246677888999999999999999999999999999999999
Q ss_pred eeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeec--c-cC----CC--hHHHHHHHH-HHcccc----------
Q 002203 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A-KG----VE--KEHVILLAA-RASRTE---------- 374 (954)
Q Consensus 315 lvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~--~-~~----~~--~~~~l~~a~-~~~~~~---------- 374 (954)
++|+++++|+||++|+||||||||||+|+|+|.+++.... . .+ .+ ..+++..++ +++...
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999998764321 0 00 00 112233332 222211
Q ss_pred -CcChHHHHHHHhcC----ChhhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCC--------
Q 002203 375 -NQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-------- 441 (954)
Q Consensus 375 -~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-------- 441 (954)
.+||+|.|++.++. +..+.+..++.++.+||+|.+|||+++++..++++++++|||||.|+++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 25899999998764 33344456778889999999999999998777778999999999999999631
Q ss_pred --hhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEc
Q 002203 442 --EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516 (954)
Q Consensus 442 --~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~---~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miT 516 (954)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||+|++++|++|+++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235678888999999999999999998764332 33478999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCcc
Q 002203 517 GDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 596 (954)
Q Consensus 517 GD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~N 596 (954)
||++.||.++|++|||.++. ...++|.+.+ .++++++++.+++.+||||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997531 2455665544 57788899999999999999999999999999999999999999999
Q ss_pred CHHhhhhCCeeEEec-cchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 002203 597 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKF 674 (954)
Q Consensus 597 DapALk~AdVGIamg-~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~ 674 (954)
|+||||+|||||||| +|+|+|+++||+||++|+|++|+.++++||++|+|+++++.|.+++|+..++..++. .+..++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766555544 445677
Q ss_pred CccHHHHHHHHHhhccc-ccccccCCCCCCC---CCCchh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002203 675 DFSPFMVLIIAILNDGT-IMTISKDRVKPSP---QPDSWK----LKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (954)
Q Consensus 675 ~~~~~~il~i~l~~d~~-~~~l~~d~~~~~~---~p~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (954)
|++|+|++|+|+++|.+ ++++++|++++.. +|.+|+ .+..+...+..|+++++++++.|++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 7999998876542 343332 3455666777899998888876665432 1110 0
Q ss_pred cccc-cCCChhHHHHHHHHHHHHHHHHHHhhhccCCC--Cc---ccChhHHHHHHHHHHHHHHHHHHHhhcccccccCcc
Q 002203 747 GVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSW--SF---IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGC 820 (954)
Q Consensus 747 g~~~-~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~--~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (954)
+... ........+|++|.++++++.++.+++|+.+. +| +.|+ +++.++++..++..++..++ ..++++.++
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~--~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l 913 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNR--IFVTIMGFTFGFQVIIVEFG-GSFFSTVSL 913 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccH--HHHHHHHHHHHHHHHHHHHH-HHHhcccCC
Confidence 1000 00123457899999999999999999998653 22 3444 55555555555554443333 234567778
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHH
Q 002203 821 GWGWAGVIWLYSLVTYFPLDILKFG 845 (954)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~k~~ 845 (954)
+|..|+++++++++.+++.++.|++
T Consensus 914 ~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 914 SIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8887777788888888888888875
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-126 Score=1082.93 Aligned_cols=811 Identities=23% Similarity=0.346 Sum_probs=638.0
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCccCcccc-cHHHHHHHhhhhhHHHHHHHHHHHHHHHHcC-CCCCCc
Q 002203 23 PIEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANG-GGRDPD 97 (954)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~il~~aail~~~l~~~-~~~~~~ 97 (954)
-.+.+++.|+++ ..||+. +|.++|++.||.|.+|++++ ++|...++.+.+.-..+|.++|++|+.++.. .+....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 378999999999 569987 89999999999999999885 5555667889998889999999999998863 444679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeec
Q 002203 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (954)
Q Consensus 98 ~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~-~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g 176 (954)
|++++.|++.+++..++..+.+|+.++....|.+ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999988766554444444444444444444432 346688999999999999999999999999999999999999999
Q ss_pred CceEEEeecccCCCcceecCC--CCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHHH-
Q 002203 177 DPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC- 252 (954)
Q Consensus 177 ~~~~VdeS~LTGEs~pv~K~~--~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~- 252 (954)
+++.||||++||||.++.|.+ ..++++||++.+|.+.++|+++|++|..|++..++.... +++|+|-.+++++...
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 457999999999999999999999999999999888775 8899999888876542
Q ss_pred --HHHHHHHHHHHHHHhhhcc-----cc---ch--------HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCc
Q 002203 253 --ICSIAVGIVAEIIIMYPVQ-----HR---KY--------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (954)
Q Consensus 253 --~~~i~~~~~~~~~~~~~~~-----~~---~~--------~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~i 314 (954)
.+.++...++.++..|+.. +. .+ .+.+..++.++++++|+|||+++++++++++++|.++++
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1111111222223333321 11 11 122333455678899999999999999999999999999
Q ss_pred eeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccC--------CChH--HHHHHH-HHHcc-----------
Q 002203 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------VEKE--HVILLA-ARASR----------- 372 (954)
Q Consensus 315 lvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~--~~l~~a-~~~~~----------- 372 (954)
+||+++|+|+||+.++||+|||||||.|+|+|.+.++....+. .++. +++..+ +..+.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999776422211 1111 111111 11111
Q ss_pred --ccCcChHHHHHHHhc----CChhhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC------
Q 002203 373 --TENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 440 (954)
Q Consensus 373 --~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~------ 440 (954)
...++|++.|++++. .|.++.+...+.++++||||.+|+|+++++.++|..+.++|||.|.|++.|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 012479999999875 46777888889999999999999999999988877349999999999999974
Q ss_pred -----ChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCC-------C-CCCCCCCceEEEEeccCCCCCccHHHHHHHHHh
Q 002203 441 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 507 (954)
Q Consensus 441 -----~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~-------~-~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~ 507 (954)
+++.++.++..++.||.+|||++|+||++..+. + .+..+.+|+++|+++|+||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566889999999999999999999984322 1 246788999999999999999999999999999
Q ss_pred CCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCE
Q 002203 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 587 (954)
Q Consensus 508 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~ 587 (954)
|||+|.|+||||..||++||.+|||.++..+-..+.|.+. ..+++++.++++++.+|+||.+|.||+-+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eF-r~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEF-RELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhh-hhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 9999999999999999999999999876443344555544 478899999999999999999999999999999999999
Q ss_pred EEEECCCccCHHhhhhCCeeEEec-cchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 002203 588 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR-IVLGF 665 (954)
Q Consensus 588 V~m~GDG~NDapALk~AdVGIamg-~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~-~~~~~ 665 (954)
||+||||+||+||||+||||.||| .|||+|||+|||||+||||++|+++++|||..|+||+||++|+++.|+. .++.+
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999984 44555
Q ss_pred HHHHHhhcCCccHHHHHHHHHhhccc-ccccccCCCCCC-----C--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 666 MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----P--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMR 737 (954)
Q Consensus 666 ~~~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~d~~~~~-----~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 737 (954)
..+...-..|++++|+||+|+++|-+ +++++.|++.+. | +..+...+..|...+.+.+|+-++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 55555667899999999999999988 799999988553 2 233445566777778889999888876544332
Q ss_pred hcccccccccccc-cCCChhHHHHHHHHHHHHHHHHHHhhhccCC---CC--cccChhHHHHHHHHHHHHHHHHHHHhhc
Q 002203 738 KTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRS---WS--FIERPGLLLATAFVIAQLVATFIAVYAN 811 (954)
Q Consensus 738 ~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~---~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 811 (954)
. . |+... .+....+..|++|.+++++|.++-++.|.-. .| .++|+ ++++++...++..++.+...
T Consensus 901 ~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~ 971 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFG 971 (1034)
T ss_pred h--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhc
Confidence 1 1 22211 1112345669999999999999999999854 11 22333 22233333333333333322
Q ss_pred ccccccCcchHhHHHHHHHHHHHHHHHHHHHH
Q 002203 812 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILK 843 (954)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 843 (954)
..++...+++|.-|++++++.+..++.-.+.|
T Consensus 972 g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik 1003 (1034)
T KOG0204|consen 972 GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLK 1003 (1034)
T ss_pred CcceeeecccHHHHHHHHHHHHHHHHHHHHhe
Confidence 34566777777766666666655554444444
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=7e-117 Score=1103.30 Aligned_cols=779 Identities=27% Similarity=0.369 Sum_probs=625.2
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHcC---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeC
Q 002203 66 FLGFMWNPLSWVMEAAAIMAIALANG---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (954)
Q Consensus 66 ~l~~~~~~~~~il~~aail~~~l~~~---~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd 142 (954)
+++||++|++++|+++++++++++.. .....+|.++++|++++++|+.++++||+++++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999998632 222358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCC-------------Ccccccceeec
Q 002203 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (954)
Q Consensus 143 g~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~-------------~~v~~Gs~v~~ 209 (954)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997899999999999999999876 78999999999
Q ss_pred CeEEEEEEEecchhHHhhHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----cccch----HHHH
Q 002203 210 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-----QHRKY----RDGI 279 (954)
Q Consensus 210 G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-----~~~~~----~~~~ 279 (954)
|+++++|++||.+|++||++++++.. ++++++|+.+++++..+...+++..++.+++.+.. ...+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 47899999999998775443332222222211111 01122 2344
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeec-----
Q 002203 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (954)
Q Consensus 280 ~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~----- 354 (954)
..++++++++||++||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 466789999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHHccc------------cCcChHHHHHHHhcCCh----h--
Q 002203 355 ------AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADP----K-- 391 (954)
Q Consensus 355 ------~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~----~-- 391 (954)
+.+++ .+.++..++.|+.. ..+||+|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00010 12234444444431 12599999998765321 0
Q ss_pred --------------hhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC-----------ChhHHH
Q 002203 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (954)
Q Consensus 392 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~ 446 (954)
..+..+++++.+||+|.+|||++++++ ++++++|+|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124557789999999999999999875 467899999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEEeecCCCC----------CCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEE
Q 002203 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (954)
Q Consensus 447 ~~~~~i~~~a~-~GlR~L~vA~~~~~~~~----------~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~mi 515 (954)
++.+++++|++ +|+|||++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 24568999999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECC
Q 002203 516 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (954)
Q Consensus 516 TGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GD 593 (954)
|||+..||.++|+++|+..+..+ ...+.|.+. ..+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999653211 123445443 356667788888888999999999999999999999999999999
Q ss_pred CccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 002203 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIW 672 (954)
Q Consensus 594 G~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~ 672 (954)
|+||+||||+||||||||+|+++|+++||+++.+|+|++|+.++++||++|+|+++++.|.+++|+..++..+++. +.+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777666654 445
Q ss_pred cCCccHHHHHHHHHhhccc-ccccccCCCCCCC---CC----CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 002203 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPSP---QP----DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFS 743 (954)
Q Consensus 673 ~~~~~~~~il~i~l~~d~~-~~~l~~d~~~~~~---~p----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 743 (954)
+.||+|+|++|+|+++|.+ +++++.+++++.. +| ++...+..+...++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999966 6889888876542 12 122234556667788999998877666554321 2211
Q ss_pred cc--c--ccccc-------CCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHh
Q 002203 744 DA--F--GVRSL-------RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVY 809 (954)
Q Consensus 744 ~~--~--g~~~~-------~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 809 (954)
.. . +..+. .......+|++|.++++++.++.|++|+.+.+++. ..+.++++++++..++.. +..|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~-~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHF-LILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHH-HHHH
Confidence 00 0 00000 00124567999999999999999999997644322 123366666665555543 3344
Q ss_pred hc--ccccccCcchHhHHHHHHHHHHHHHHHHHHHHHHhH
Q 002203 810 AN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847 (954)
Q Consensus 810 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r 847 (954)
.+ ..++++.+++|..|+++++++++.++..++.|+++|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 43 234567788898888889999999999999998754
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-118 Score=1012.43 Aligned_cols=844 Identities=24% Similarity=0.403 Sum_probs=694.5
Q ss_pred ccccchhhhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHhhhhhHHHHHHH
Q 002203 4 DKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEA 80 (954)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~ 80 (954)
++..++++.++| .+|.|++|.+|++++++++ .+|||.++|.+++.+-|+|.+++++ .+.|.+|++|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 445578899999 8899999999999999999 7899999999999999999998776 567999999999999999999
Q ss_pred HHHHHHHHHc-----CCCC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcC
Q 002203 81 AAIMAIALAN-----GGGR-DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 154 (954)
Q Consensus 81 aail~~~l~~-----~~~~-~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv 154 (954)
+++++++... .... ...-+-++++..++++..+..|+|+.+..+.+++.+++.|+.+.|+|||+...+.+++||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 9999997432 1111 122333445556667788889999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCC----------CcccccceeecCeEEEEEEEecchhH
Q 002203 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHTF 224 (954)
Q Consensus 155 ~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~----------~~v~~Gs~v~~G~~~~~V~~tG~~T~ 224 (954)
|||+|.++-||+||||.|++++..+++|+|+|||||.|..+++. |+.|.+|.+.+|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 99999999999999999999999999999999999999999773 67899999999999999999999999
Q ss_pred HhhHHHhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q 002203 225 FGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303 (954)
Q Consensus 225 ~gki~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~ 303 (954)
+|+|+.+-.. ...++++++.++++..+.....++ +.+.++......++.+.+++.+.+.++++.+|++||..+++.++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999998765 467889999988887664322222 22222222223367888888889999999999999999999999
Q ss_pred HHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecc---------c-------CCChHHHHHHH
Q 002203 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---------K-------GVEKEHVILLA 367 (954)
Q Consensus 304 ~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~---------~-------~~~~~~~l~~a 367 (954)
.-++||++++.++|++.++|+||+.++||+|||||||+|.|+|.+.+.+..- . ...-..+...+
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987753110 0 00112345555
Q ss_pred HHHccc---------------cCcChHHHHHHHhc----CChhhhhcCceEEEeecCCCCCcceEEEEEcCC---CcEEE
Q 002203 368 ARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWHR 425 (954)
Q Consensus 368 ~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~---g~~~~ 425 (954)
..|++. ..+|+.+.|++++. ++..+.++..+.+..+||||.+|..-.+....| .+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 555432 13588999999875 455778888899999999999999887776544 57889
Q ss_pred EEcCcHHHHHHhhcC----------ChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-----------CCCCCCceE
Q 002203 426 ASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQL 484 (954)
Q Consensus 426 ~~KGa~e~il~~c~~----------~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~-----------~~~e~~l~~ 484 (954)
..|||||.++++|+. ++...+.+++...++...|-||++++++.+++.+. .-...+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 999999999999973 44567788888899999999999999999886532 234568999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcc
Q 002203 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSL 542 (954)
Q Consensus 485 lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l 542 (954)
+|++++.||||..+|+++.+||.|||||+|+||||+.||+++|++.||..+..+ ..++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 999999999999999999999999999999999999999999999997542110 0113
Q ss_pred cCcccccccCcccHHHHhhhcc--eEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEec-cchHHHHh
Q 002203 543 LGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 619 (954)
Q Consensus 543 ~g~~~~~~~~~~~~~~~~~~~~--vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg-~gtd~A~~ 619 (954)
.|.++. .++.+++++++++.. ||||.||+||+.||+.+|++|.+|++||||+||+||||+|||||||| .|+|++|+
T Consensus 662 hG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred eccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 344333 678889999998765 99999999999999999999999999999999999999999999999 99999999
Q ss_pred ccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhcCCccHHHHHHHHHhhccc-cccccc
Q 002203 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM-LIALIWKFDFSPFMVLIIAILNDGT-IMTISK 697 (954)
Q Consensus 620 aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~-~~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~ 697 (954)
|||+||+||||++|+..|++||-+|+|+||.+.|.+++|+..+..++ .+.+..|+|+.++++|.|.+.+|+. +++++|
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 99999999999999999999999999999999999999997665554 4556789999999999999999997 699999
Q ss_pred CCCCCC-----C---CCCchhHHHHHHH-HHHHHHHHHHHHHHHHHHH-Hhcccccccc----------cccccCCChh-
Q 002203 698 DRVKPS-----P---QPDSWKLKEIFAT-GVVLGSYLAIMTVVFFWLM-RKTDFFSDAF----------GVRSLRTRPD- 756 (954)
Q Consensus 698 d~~~~~-----~---~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~----------g~~~~~~~~~- 756 (954)
|.++.. | +.++.-.++++.+ .+..|+++++..|+.|++. ...||++... +++++.+++.
T Consensus 821 E~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQ 900 (1019)
T KOG0203|consen 821 EKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQ 900 (1019)
T ss_pred cCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccc
Confidence 987543 2 2233434555554 4677999999999766544 4566665331 1223333322
Q ss_pred ------------HHHHHHHHHHHHHHHHHHhhhccCCCCcc--cChhHHHHHHHHHHHHHHHHHHHhhc-ccccccCcch
Q 002203 757 ------------EMMAALYLQVSIISQALIFVTRSRSWSFI--ERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGCG 821 (954)
Q Consensus 757 ------------~~~t~~f~~~~~~~~~~i~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 821 (954)
+.+|+.|.++++.|.+.++.+.+++-+.+ ...++.++.++++-.+++.++++-.. ...+++.++.
T Consensus 901 eWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~ 980 (1019)
T KOG0203|consen 901 EWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLK 980 (1019)
T ss_pred cccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCC
Confidence 25688889999999999888888775433 45667888888887777766643221 2234678889
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 002203 822 WGWAGVIWLYSLVTYFPLDILKFGIRYI 849 (954)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~k~~~r~~ 849 (954)
|.||++.+.++++.++.+|+.|++.|.+
T Consensus 981 ~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 981 FQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred cEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 9999999999999999999999999876
No 15
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3.2e-113 Score=1083.59 Aligned_cols=751 Identities=21% Similarity=0.261 Sum_probs=592.4
Q ss_pred CCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHH
Q 002203 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (954)
Q Consensus 35 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i 114 (954)
.+|||++|+++|+++||+|+++.+++++|+.|++++++|++++++++++++++. .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998889999999999999988877776665542 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEe--CCCeeccceEEeecCceEEEeecccCCCcc
Q 002203 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (954)
Q Consensus 115 ~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~--~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~p 192 (954)
++++++++.++++++.. .++.++|+|||+|++|+++||||||||.|+ +||+|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888644 578999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------Ccccccceeec-------CeEEEEEEEecchhHHhhHHHhhhcc-CCCCcHHHHHH
Q 002203 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLT 246 (954)
Q Consensus 193 v~K~~~------------------~~v~~Gs~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~ 246 (954)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+.+... ...+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 24999999985 78999999999999999999988765 45678888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhc
Q 002203 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (954)
Q Consensus 247 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg 326 (954)
++..+++++.+++++. +++.+...+.++.+.+..++.+++++||++||++++++++.++.||+|+|++||++.++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7765543333222222 111222235678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeCCCCccccCceeeeeeeeeecccC----------CChHHHHHHHHHHccc------cCcChHHHHHHHhcCCh
Q 002203 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASRT------ENQDAIDAAIVGMLADP 390 (954)
Q Consensus 327 ~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~ai~~~~~~~ 390 (954)
++|++|||||||||+|+|+|.+......... ......+...+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211000 0112222223333221 23699999999976411
Q ss_pred ----hhh---------------hcCceEEEeecCCCCCcceEEEEEcCC-CcEEEEEcCcHHHHHHhhcCChhHHHHHHH
Q 002203 391 ----KEA---------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (954)
Q Consensus 391 ----~~~---------------~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~c~~~~~~~~~~~~ 450 (954)
.+. ...+++++.+||+|.+|||+++++..+ +++++++|||||.|+++|+. +..++.+++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 000 245788999999999999999998654 56789999999999999984 345778889
Q ss_pred HHHHHHHcCCeEEEEEEeecCCC--------CCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHH
Q 002203 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (954)
Q Consensus 451 ~i~~~a~~GlR~L~vA~~~~~~~--------~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 522 (954)
.+++|+++|+||||+|||++++. +++..|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC---------------------------------------------------CcccCccccc--
Q 002203 523 GKETGRRLGMGTNMYPS---------------------------------------------------SSLLGQDKDA-- 549 (954)
Q Consensus 523 A~~ia~~lGi~~~~~~~---------------------------------------------------~~l~g~~~~~-- 549 (954)
|.++|+++||.++.... ..++|...+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996432100 0111111100
Q ss_pred ccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCC
Q 002203 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (954)
Q Consensus 550 ~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~ 629 (954)
.+.++++.+++++..||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+|+
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1233467778888999999999999999999999999999999999999999999999999864 555 79999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhccc-ccccccCCCCCC---CC
Q 002203 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQ 705 (954)
Q Consensus 630 ~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~d~~~~~---~~ 705 (954)
|++|+.+|++||++|.|+++.+.|.+.+++..++.+++ ....+.+|+++|++|++++++.+ .++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999988866554433 33456889999999999999987 688888877653 12
Q ss_pred C-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-cCCChhHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 002203 706 P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 783 (954)
Q Consensus 706 p-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~ 783 (954)
| .+...+..+...+..+++..++.+..|++.....|+........ -........|++| .++..+++..+..++.+.+
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 3 22333444555566677777777777766665555421111100 0001223467778 6667777777878876644
Q ss_pred c----ccChhHHHHHHHHHHHHH
Q 002203 784 F----IERPGLLLATAFVIAQLV 802 (954)
Q Consensus 784 ~----~~~~~~~l~~~~~~~~~~ 802 (954)
| ++|+ +++++++++.++
T Consensus 1002 f~~~~~~N~--~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 1002 FREPIYKNK--PFVYLLITGLGL 1022 (1054)
T ss_pred hhhhHHHhH--HHHHHHHHHHHH
Confidence 3 3444 444444444333
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.9e-103 Score=993.06 Aligned_cols=786 Identities=18% Similarity=0.224 Sum_probs=579.9
Q ss_pred cCCCccCcccccHH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (954)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~ 125 (954)
|..|.+...|++.| +.|++||.+|++++|+++++++++... .....+...++++++++++++.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~--s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPIL--SPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCc--CCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998876 789999999999999999999998432 222234455667777779999999999999998
Q ss_pred HHHHhhcCCCeEEEEeC-CeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCc----eEEEeecccCCCcceecCCC--
Q 002203 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-- 198 (954)
Q Consensus 126 ~~~l~~~~~~~~~V~Rd-g~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~----~~VdeS~LTGEs~pv~K~~~-- 198 (954)
.+++ +++.++|+|| |++++++|+||+|||+|.|++||+||||++|+++++ |+||||+|||||+|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 4589999997 899999999999999999999999999999998644 99999999999999998641
Q ss_pred ----------------------------------------------Ccccccceeec-CeEEEEEEEecchhHHhhHHHh
Q 002203 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (954)
Q Consensus 199 ----------------------------------------------~~v~~Gs~v~~-G~~~~~V~~tG~~T~~gki~~l 231 (954)
|.+|+||.+++ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 46789999999 89999999999999887632
Q ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc----cch---------------HHHHHHHHHHHHhhcCC
Q 002203 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (954)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~lli~~iP~ 292 (954)
.....+.+++++.++++..+++++.++.+++..++.+.+.. ..| ...+..+++++..+||+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 12234779999999999876554333322222222111111 011 12566788999999999
Q ss_pred chhHHHHHHHHHHH------HHhhcC----CceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCC----
Q 002203 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV---- 358 (954)
Q Consensus 293 aLp~~~~i~l~~~~------~~l~~~----~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~---- 358 (954)
+||+++++++++++ .+|.++ ++++|+++++|+||+|++||+|||||||+|+|+++++.+....++.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 5999999999999999999999999999999999998753211000
Q ss_pred -----------------------------C----------------hHHHHHHHHHHccc------c--------CcChH
Q 002203 359 -----------------------------E----------------KEHVILLAARASRT------E--------NQDAI 379 (954)
Q Consensus 359 -----------------------------~----------------~~~~l~~a~~~~~~------~--------~~~~~ 379 (954)
+ ..+++..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 01233333333221 0 25899
Q ss_pred HHHHHHhcCCh---------h---------hhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC-
Q 002203 380 DAAIVGMLADP---------K---------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (954)
Q Consensus 380 ~~ai~~~~~~~---------~---------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~- 440 (954)
|.|++.++... + .....+++++.+||+|.||||++++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999876321 1 0124578899999999999999999998888999999999999999985
Q ss_pred ChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCceEEEEeccCCCCC
Q 002203 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPR 495 (954)
Q Consensus 441 ~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~~lGli~i~D~lr 495 (954)
+++.++++.+++++|+.+|+|||++|+|.+++++. +.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999875421 34689999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC-----------------------------------
Q 002203 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (954)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~----------------------------------- 540 (954)
+|++++|+.|++|||+|||+|||+++||.+||++||+.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975422100
Q ss_pred ----cccCcccccccCc---ccHHHHhhhcc--eEEecChhhHHHHHHHHhhC-CCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 541 ----SLLGQDKDASIAA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 541 ----~l~g~~~~~~~~~---~~~~~~~~~~~--vfarvsP~qK~~iV~~lq~~-g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
++.|...+..+++ ..+.+++.+++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1222222111111 12334555555 99999999999999999998 99999999999999999999999998
Q ss_pred -c-cchHHHHhccCEEEcCCCchhHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CccHHHHHH
Q 002203 611 -A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF----DFSPFMVLI 683 (954)
Q Consensus 611 -g-~gtd~A~~aADivL~~~~~~~i~~ai-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~----~~~~~~il~ 683 (954)
| +|. .|+.|||++|.+ |+.+..++ .|||++|+|+++++.|.+++|+.+++..+++.++..+ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 333 466799999975 99999987 7999999999999999999999888887777665433 578889999
Q ss_pred HHHhhccc-cccccc-CCCCCC----CCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Q 002203 684 IAILNDGT-IMTISK-DRVKPS----PQPD--------SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (954)
Q Consensus 684 i~l~~d~~-~~~l~~-d~~~~~----~~p~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (954)
+|++.+.+ +++++. |+..++ ..|. .....+.|+.+++.|++++++++++.++.+...... ..|
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g-- 947 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG-- 947 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC--
Confidence 99999886 577754 332211 1121 111234455567789999998886655554321111 112
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhh-cc---cccccCcchHhHH
Q 002203 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYA-NW---SFARIEGCGWGWA 825 (954)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~ 825 (954)
...+.....+++|+.+.+..++.++ ..++.|+|......| +++++.++...++..+. .. +.......++.+|
T Consensus 948 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~wt~~~~~~~~--~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~ 1023 (1057)
T TIGR01652 948 -SLDDFSSVGVIVFTALVVIVNLKIA-LEINRWNWISLITIW--GSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFW 1023 (1057)
T ss_pred -cccchhhHHHHHHHHHHHHHHHHHH-HHHhHhHHHHHHHHH--HHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHH
Confidence 1123445567777777666666543 344456654333222 22222111111111110 00 0011111234566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCC
Q 002203 826 GVIWLYSLVTYFPLDILKFGIRYILSG 852 (954)
Q Consensus 826 ~~~~~~~~~~~~~~~~~k~~~r~~~~~ 852 (954)
+.+++..++.++|.-++|+++|.+.|.
T Consensus 1024 l~~ll~~~~~l~p~~~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1024 LVLLVIVLISLLPRFTYKAIQRLFRPP 1050 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 666777888888999999988877653
No 17
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.7e-98 Score=940.48 Aligned_cols=786 Identities=16% Similarity=0.167 Sum_probs=569.0
Q ss_pred HhcCCCccCcccccHH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (954)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~ 123 (954)
.+|..|.+...|+++| +.+++||..+.|++|++.++++++.. ......+...+++++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~--~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ--LAVFGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCC--cccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999998875 67889999999999999999998743 22233566778888999999999999999999
Q ss_pred HHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecC----ceEEEeecccCCCcceecCCC-
Q 002203 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (954)
Q Consensus 124 ~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~----~~~VdeS~LTGEs~pv~K~~~- 198 (954)
++.++. ++..++|+|+|++++++|++|+|||+|+|++||.||||++|++++ .|+||||+|||||+|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 988765 457899999999999999999999999999999999999999843 499999999999999999753
Q ss_pred --------------------------------------------CcccccceeecC-eEEEEEEEecchhHHhhHHHhhh
Q 002203 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (954)
Q Consensus 199 --------------------------------------------~~v~~Gs~v~~G-~~~~~V~~tG~~T~~gki~~l~~ 233 (954)
+.+++||.+++. .++|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 245667777776 49999999999997421 1111
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccc-c---------------------ch-------HHHHHHH
Q 002203 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQH-R---------------------KY-------RDGIDNL 282 (954)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~~-~---------------------~~-------~~~~~~~ 282 (954)
...+.+++++.+|++..+++++.++.+++..++ .|.... . ++ ...+...
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 124779999999998866544333222222211 111000 0 00 1112334
Q ss_pred HHHHHhhcCCchhHHHHHHHHHHHHHhhcCC----------ceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeee
Q 002203 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (954)
Q Consensus 283 l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~----------ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~ 352 (954)
++++..+||++|++++++++..++..+.++. +.||+.+.+|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5677799999999999999988888887655 789999999999999999999999999999999998763
Q ss_pred ecccC-----------------------------------------CC-h-----HHHHHHHHHHccc-c----------
Q 002203 353 VFAKG-----------------------------------------VE-K-----EHVILLAARASRT-E---------- 374 (954)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~~a~~~~~~-~---------- 374 (954)
+..++ .+ + .+++...+.|+.. .
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21110 00 0 1223333333221 1
Q ss_pred -------CcChHHHHHHHhcCC----------------hhhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcH
Q 002203 375 -------NQDAIDAAIVGMLAD----------------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (954)
Q Consensus 375 -------~~~~~~~ai~~~~~~----------------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 431 (954)
..+|.|.|++.++.+ ....+..|++++.+||+|+|||||+++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 126899999987642 122456789999999999999999999988889999999999
Q ss_pred HHHHHhhcCC--hhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCceE
Q 002203 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (954)
Q Consensus 432 e~il~~c~~~--~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~~ 484 (954)
|.|+++|+.. ++.++++.+++++|+++|+|||++|||.+++++. +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 4567788999999999999999999999975421 346899999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcc----------------------
Q 002203 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL---------------------- 542 (954)
Q Consensus 485 lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l---------------------- 542 (954)
+|+++++||||+|++++|++|+++||+|||+|||+.+||++||++|||.++......+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999996543211000
Q ss_pred -------------------------cCcccccccC---cccHHHHhhhcc--eEEecChhhHHHHHHHHhhC-CCEEEEE
Q 002203 543 -------------------------LGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (954)
Q Consensus 543 -------------------------~g~~~~~~~~---~~~~~~~~~~~~--vfarvsP~qK~~iV~~lq~~-g~~V~m~ 591 (954)
.|...+..++ .+.+.++..+++ ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1111110001 123445555555 79999999999999999997 6899999
Q ss_pred CCCccCHHhhhhCCeeEEe-c-cchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 592 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669 (954)
Q Consensus 592 GDG~NDapALk~AdVGIam-g-~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~ 669 (954)
|||+||+||||+|||||++ | +|.+|++ |||+++.++++..-+.++ |||++|+|+.+.+.|.+++|+.+++..+++.
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 5 6666665 999999888876666666 9999999999999999999999999999988
Q ss_pred HhhcCC----ccHHHHHHHHHhhccc-ccccc-cCCCCCC----CCC---------CchhHHHHHHHHHHHHHHHHHHHH
Q 002203 670 LIWKFD----FSPFMVLIIAILNDGT-IMTIS-KDRVKPS----PQP---------DSWKLKEIFATGVVLGSYLAIMTV 730 (954)
Q Consensus 670 ~~~~~~----~~~~~il~i~l~~d~~-~~~l~-~d~~~~~----~~p---------~~~~~~~~~~~~~~~g~~~~~~~~ 730 (954)
++.+|. +.++.+.++|++...+ ++.++ +|+.-+. ..| ..++ .+.|+.+++.|+++++++|
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n-~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN-SKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccC-HHHHHHHHHHHHHHHHHHH
Confidence 887764 4455666666655444 56653 4544322 112 1222 3456667888999999988
Q ss_pred HHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHh-
Q 002203 731 VFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY- 809 (954)
Q Consensus 731 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 809 (954)
++.++.+.... .+. ....+++++.++++..+.++ ..++.|.|.....+| +++++..++..++...
T Consensus 1035 f~~~~~~~~~~----~~~-------~~~~~~~~~~~v~~vnl~i~-~~~~~wt~~~~~~i~--~Si~~~~i~~~~~~~~~ 1100 (1178)
T PLN03190 1035 FVPLFAYWAST----IDG-------SSIGDLWTLAVVILVNLHLA-MDIIRWNWITHAAIW--GSIVATFICVIVIDAIP 1100 (1178)
T ss_pred HHHHHHhcCCC----cCc-------eeEhHhhhhHHHHHHHHHHH-HHHhhhhHHHHHHHH--HHHHHHHHHHHHHHhcc
Confidence 76665543211 110 01123344444444444332 445557654443222 2222222111111100
Q ss_pred --hc-ccccccCcchHhHHHHHHHHHHHHHHHHHHHHHHhHhhcCCcchhhhh
Q 002203 810 --AN-WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLL 859 (954)
Q Consensus 810 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~ 859 (954)
.. +.+..+ ...+.+|+.+++..++.++|.-++|++.|.+.|. ..+..+
T Consensus 1101 ~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~-~~~~~~ 1151 (1178)
T PLN03190 1101 TLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPC-DVQIAR 1151 (1178)
T ss_pred cchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHH
Confidence 00 111111 1234566676788888888999999988877764 344443
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6.4e-97 Score=877.04 Aligned_cols=545 Identities=23% Similarity=0.359 Sum_probs=452.9
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHcCCC--CCCch--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-eEE
Q 002203 68 GFMWNPLSWVMEAAAIMAIALANGGG--RDPDW--QDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK 138 (954)
Q Consensus 68 ~~~~~~~~~il~~aail~~~l~~~~~--~~~~~--~~~~~I~~~~~i~~~i~~~~----e~~a~~~~~~l~~~~~~-~~~ 138 (954)
.+++||+.|+++++++++++++.... ....| ...+.|+++++++..++.++ |+|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 47899999999999999998763110 11122 45677778888888887777 78999999999998886 786
Q ss_pred -EEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCC---CcccccceeecCeEEE
Q 002203 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (954)
Q Consensus 139 -V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~---~~v~~Gs~v~~G~~~~ 214 (954)
|.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 569999999999999999999 8899999999999999
Q ss_pred EEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccchHHHHHHHHHHHHhhcCC
Q 002203 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPI 292 (954)
Q Consensus 215 ~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~lli~~iP~ 292 (954)
+|+++|.+|++||+++++++++ +++|+|..+..+...+.+++++ ++ +..+.+ ...++...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~--~~--~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLV--VI--LTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHH--HH--HHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998874 7889987665544322211111 11 111111 1123445667788888999999
Q ss_pred chhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHcc
Q 002203 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (954)
Q Consensus 293 aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 372 (954)
+||..++++.+.|+.+|+|+|+++|+++++|+||++|++|||||||||+|++.+.+... ..+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999997776655431 124455667777666654
Q ss_pred ccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCCh-hHHHHHHHH
Q 002203 373 TENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAV 451 (954)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~ 451 (954)
. +.||++.|++.++..... .......+++||++.+|+|++.+ +|+ .+.||+|+.++++|+... ..+..+++.
T Consensus 340 ~-s~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 A-DDTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred C-CCChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 4 449999999987642110 00111235689999999999864 343 466999999999997421 223456677
Q ss_pred HHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhC
Q 002203 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (954)
Q Consensus 452 i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 531 (954)
+++++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 348999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEec
Q 002203 532 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (954)
Q Consensus 532 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg 611 (954)
|. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||
T Consensus 480 I~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 94 269999999999999999999999999999999999999999999999
Q ss_pred cchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 670 (954)
Q Consensus 612 ~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 670 (954)
+|||+||+|||+||+||||++|++++++||++|.|+++++.|.++.|+...+..+...|
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977665544333
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.2e-93 Score=846.25 Aligned_cols=536 Identities=24% Similarity=0.323 Sum_probs=451.9
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHcC----CC---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEE
Q 002203 68 GFMWNPLSWVMEAAAIMAIALANG----GG---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKV 139 (954)
Q Consensus 68 ~~~~~~~~~il~~aail~~~l~~~----~~---~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~-~~~V 139 (954)
.||+||+.++++++++++++++.. .+ ....|...+.+++.+++...++.++|+|+++++++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 589999999999999999987631 11 112344455556666777777889999999999999998875 7999
Q ss_pred EeCCe-EEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCCCc---ccccceeecCeEEEE
Q 002203 140 LRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 215 (954)
Q Consensus 140 ~Rdg~-~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~~~---v~~Gs~v~~G~~~~~ 215 (954)
+|||+ +++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++|+. +|+||.|.+|++.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 99999999999999999999999999999999 58999999999999999999988 999999999999999
Q ss_pred EEEecchhHHhhHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCch
Q 002203 216 VIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (954)
Q Consensus 216 V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL 294 (954)
|+++|.+|++||+.++++.+ .+++|+|..++.+...+...+++.++..+++.++ .+.. ..+..++++++++|||+|
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999887 4678999887776554433222222221112121 1222 367888999999999999
Q ss_pred hHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHcccc
Q 002203 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (954)
Q Consensus 295 p~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 374 (954)
+..++++...|+.+|+|+|+++|++.++|+||++|++|||||||||+|+|.+.+... ..+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988652 23566777777777776655
Q ss_pred CcChHHHHHHHhcCCh---hhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCC-hhHHHHHHH
Q 002203 375 NQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHA 450 (954)
Q Consensus 375 ~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~ 450 (954)
+ ||.+.|++.++... ......++..++.||++.++++++.+ +| ..+.||++|.+++.|+.. .+.++++++
T Consensus 342 ~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 E-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred C-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 4 89999998876431 11111245677899999988887653 34 578999999999999642 234567788
Q ss_pred HHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002203 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (954)
Q Consensus 451 ~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 530 (954)
.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++
T Consensus 416 ~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 889999999999999974 4899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 531 Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
||+ ++|||++||||+++|+.+|++|++|+|||||+||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 984 26999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 002203 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (954)
Q Consensus 611 g~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni 659 (954)
|+|||+||+|||+||+||||++|++++++||++.-.--....|++..-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998444445666655434
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.4e-88 Score=804.48 Aligned_cols=538 Identities=22% Similarity=0.314 Sum_probs=452.3
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHcC---C---CCCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eE
Q 002203 68 GFMWNPLSWVMEAAAIMAIALANG---G---GRDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (954)
Q Consensus 68 ~~~~~~~~~il~~aail~~~l~~~---~---~~~~~~~~~---~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~-~~ 137 (954)
.||.||+.++++++++++++++.. . +....|++. +.+++.+++...++.++|+|++++.++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 478999999999999999997531 1 111246653 3344556777888889999999999999998877 48
Q ss_pred EEEe-CCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCCCc---ccccceeecCeEE
Q 002203 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (954)
Q Consensus 138 ~V~R-dg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~~~---v~~Gs~v~~G~~~ 213 (954)
+|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.||.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 99999999999999999999999999999999999 68999999999999999999975 8999999999999
Q ss_pred EEEEEecchhHHhhHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCC
Q 002203 214 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (954)
Q Consensus 214 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~ 292 (954)
++|+++|.+|++||+.++++.+ .+++|+|..++.+..++.+++++..+. +..+..+. .....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 467899988877665543322221111 11111111 1223567778999999999
Q ss_pred chhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHcc
Q 002203 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (954)
Q Consensus 293 aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 372 (954)
+|+...+.....|+.+|+++|+++|++.++|+||++|++|||||||||+|+|++.+... ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 88877777777899999999999999999999999999999999999999999988652 235567778888777766
Q ss_pred ccCcChHHHHHHHhcCChhh--hhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCC-hhHHHHHH
Q 002203 373 TENQDAIDAAIVGMLADPKE--ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (954)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~ 449 (954)
.. .||.+.|++.++..... ....++..++.||++.++++++.+. +| ..+.||+||.+++.|+.. ...++.++
T Consensus 341 ~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 AD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 54 48999999887643111 1112345678999999877765433 45 578999999999988532 23346678
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002203 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (954)
Q Consensus 450 ~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 529 (954)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999753 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEE
Q 002203 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (954)
Q Consensus 530 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIa 609 (954)
+|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 2699999999999999999999999999999999999999999999
Q ss_pred eccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 002203 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (954)
Q Consensus 610 mg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~ 660 (954)
|++|+++|+++||++|+||||++|++++++||+++-+....+.|.++.++.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999999999999999999999999887764
No 21
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-88 Score=781.31 Aligned_cols=652 Identities=23% Similarity=0.331 Sum_probs=502.0
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCchhhHHHH
Q 002203 25 EEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGI 104 (954)
Q Consensus 25 ~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~~~~~~~I 104 (954)
.+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..+|+ +++.+..+.-|... .+++.+..|
T Consensus 148 ~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI 220 (1140)
T KOG0208|consen 148 PRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCI 220 (1140)
T ss_pred hhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHH
Confidence 34444555557899999999999999999999999999999999999999 66666555555432 355566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeC-CCeeccceEEeecCceEEEe
Q 002203 105 IVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQ 183 (954)
Q Consensus 105 ~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~-Gd~VPaD~~ll~g~~~~Vde 183 (954)
+++.+.+...+.+|.++..+.+..+-+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.|||
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNE 298 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeec
Confidence 788888888999999999888877543 4578999999999999999999999999998 8999999999999 699999
Q ss_pred ecccCCCcceecCCC-------------------Ccccccceeec------CeEEEEEEEecchhHHhhHHHhhhccCCC
Q 002203 184 SALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQV 238 (954)
Q Consensus 184 S~LTGEs~pv~K~~~-------------------~~v~~Gs~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~~~ 238 (954)
|+|||||.|+.|.+. +.+|.||.+.+ |.+.++|++||.+|..|++.+.+-..+ +
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P 377 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-P 377 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-C
Confidence 999999999999874 36899999886 569999999999999998877665443 3
Q ss_pred CcHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCcee
Q 002203 239 GHFQKVLTAIGNF--CICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (954)
Q Consensus 239 ~~~~~~~~~i~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilv 316 (954)
.+++-.-+.+..+ +.++.+++++. .++.+...+.+....+..++.++...+|+|||.++++....+..||.|+||+|
T Consensus 378 ~~fkfyrds~~fi~~l~~ia~~gfiy-~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfC 456 (1140)
T KOG0208|consen 378 VNFKFYRDSFKFILFLVIIALIGFIY-TAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFC 456 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEE
Confidence 3344333333222 11111111111 12222345678888999999999999999999999999999999999999999
Q ss_pred ccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecc---c---------------------CCCh--HHHHHHHHHH
Q 002203 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---K---------------------GVEK--EHVILLAARA 370 (954)
Q Consensus 317 k~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~---~---------------------~~~~--~~~l~~a~~~ 370 (954)
-+++.+...|++|++|||||||||++.+.+.......-+ . ...+ .....+|.++
T Consensus 457 isP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCH 536 (1140)
T KOG0208|consen 457 ISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCH 536 (1140)
T ss_pred cCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhc
Confidence 999999999999999999999999999988654431000 0 0011 1111222222
Q ss_pred cc-----ccCcChHHHHHHHhcC------------------------Chhh--------hh-cCceEEEeecCCCCCcce
Q 002203 371 SR-----TENQDAIDAAIVGMLA------------------------DPKE--------AR-AGVREVHFLPFNPVDKRT 412 (954)
Q Consensus 371 ~~-----~~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~l~~~pF~s~~kr~ 412 (954)
+- ...+||+|..+.+..+ +|.+ .. ..+.+++.+||+|.-+||
T Consensus 537 SL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRM 616 (1140)
T KOG0208|consen 537 SLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRM 616 (1140)
T ss_pred eeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheE
Confidence 21 1135777655443221 1111 01 146788999999999999
Q ss_pred EEEEEcC-CCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCC--------CCCCCCCCce
Q 002203 413 ALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQ 483 (954)
Q Consensus 413 sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~--------~~~~~e~~l~ 483 (954)
||++.++ +.+..+|+|||||.|.+.|+ .+.+++.+++.++.|+.+|+|++|+|+|+++.. .++..|.+|+
T Consensus 617 SVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~ 695 (1140)
T KOG0208|consen 617 SVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLE 695 (1140)
T ss_pred EEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccce
Confidence 9999875 46789999999999999998 466788999999999999999999999999876 3678999999
Q ss_pred EEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC----------C-------------
Q 002203 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS----------S------------- 540 (954)
Q Consensus 484 ~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~----------~------------- 540 (954)
|+|++.||+++|++++.+|++|++|+|+++|+||||..||..+||+|||....... .
T Consensus 696 FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~ 775 (1140)
T KOG0208|consen 696 FLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQ 775 (1140)
T ss_pred eeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCc
Confidence 99999999999999999999999999999999999999999999999995421100 0
Q ss_pred -cccCc----------c----------cccccC-----------cccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEE
Q 002203 541 -SLLGQ----------D----------KDASIA-----------ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHIC 588 (954)
Q Consensus 541 -~l~g~----------~----------~~~~~~-----------~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V 588 (954)
...+. + ..-.++ .+.+++++.+.+|||||+|.||.++|+.||+-|+.|
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~V 855 (1140)
T KOG0208|consen 776 TQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKV 855 (1140)
T ss_pred cccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEE
Confidence 00000 0 000122 223566777889999999999999999999999999
Q ss_pred EEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 589 GMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668 (954)
Q Consensus 589 ~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~ 668 (954)
+|||||+||+.|||+|||||+++++. |.-||.+.=.-++.+.+++.|++||..+-.--..+.|...+.+..++..++
T Consensus 856 gfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~- 932 (1140)
T KOG0208|consen 856 GFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF- 932 (1140)
T ss_pred EecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe-
Confidence 99999999999999999999998543 444788877778999999999999997766655666655554432222211
Q ss_pred HHhhcCCccHHHHHHHHHhhccc
Q 002203 669 ALIWKFDFSPFMVLIIAILNDGT 691 (954)
Q Consensus 669 ~~~~~~~~~~~~il~i~l~~d~~ 691 (954)
...-+..+.-+|.+++.++-..+
T Consensus 933 LY~~~~nl~D~Qfl~iDLlii~p 955 (1140)
T KOG0208|consen 933 LYLINSNLGDLQFLFIDLLIITP 955 (1140)
T ss_pred eeeecccccchhhhhhHHHHHHH
Confidence 11234567888888888876544
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=7.2e-91 Score=843.31 Aligned_cols=793 Identities=18% Similarity=0.198 Sum_probs=578.8
Q ss_pred HHHhcCCCccCcccccHH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002203 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (954)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~ 121 (954)
+..+|-.|.+...|++++ +.+++||.++.|++|++.++++++. .++...|...+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999998765 7889999999999999999999985 235567888899999999999999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEeCCe-EEEEecCCcCCCcEEEEeCCCeeccceEEeecC----ceEEEeecccCCCcceecC
Q 002203 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (954)
Q Consensus 122 a~~~~~~l~~~~~~~~~V~Rdg~-~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~----~~~VdeS~LTGEs~pv~K~ 196 (954)
+.+....+ +..++.|.|++. +++..|++|++||+|++..++.+|||.+|++++ .|+|++++|+||++++.|+
T Consensus 105 R~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHh---hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 99988765 457899998644 899999999999999999999999999999764 4999999999999999885
Q ss_pred C-----------------------------------------------CCcccccceeecCe-EEEEEEEecchhHHhhH
Q 002203 197 P-----------------------------------------------YDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (954)
Q Consensus 197 ~-----------------------------------------------~~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki 228 (954)
. .+++++|+++++++ +.++|+.||++|++++.
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 12467888888886 89999999999987653
Q ss_pred HHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhcc---c--------c-----chHHHHHHHHHHHHhhc
Q 002203 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (954)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~---~--------~-----~~~~~~~~~l~lli~~i 290 (954)
... ...+++.+++.++.+...+++.++...++..+. .|... . . .....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 322 334778888888887655443332222211111 11110 0 0 01123556788899999
Q ss_pred CCchhHHHHHHHHHHHHHhh----------cCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCCh
Q 002203 291 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (954)
Q Consensus 291 P~aLp~~~~i~l~~~~~~l~----------~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 360 (954)
|++|++.+++....++.-+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+.+..++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999884433 35788999999999999999999999999999999999988654433211
Q ss_pred H--------------------------------------------HHHHHHHHHc-ccc------------CcChHHHHH
Q 002203 361 E--------------------------------------------HVILLAARAS-RTE------------NQDAIDAAI 383 (954)
Q Consensus 361 ~--------------------------------------------~~l~~a~~~~-~~~------------~~~~~~~ai 383 (954)
+ +.....+.|. ..+ .+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 1122222222 111 135777888
Q ss_pred HHhcCCh---------h-------hhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhc-CChhHHH
Q 002203 384 VGMLADP---------K-------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (954)
Q Consensus 384 ~~~~~~~---------~-------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~-~~~~~~~ 446 (954)
+..+.+. + .....|+.++.++|+|.||||||++++++|+..+|||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7766321 0 013578999999999999999999999999999999999999999998 4567788
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCceEEEEeccCCCCCccHHHH
Q 002203 447 KVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAET 501 (954)
Q Consensus 447 ~~~~~i~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~~lGli~i~D~lr~~~~~~ 501 (954)
+..+++++||.+|+||||+|||+++++++ +.+|+||+++|.+++||++|+||||+
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 89999999999999999999999987652 45799999999999999999999999
Q ss_pred HHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcc---------------------------------------
Q 002203 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--------------------------------------- 542 (954)
Q Consensus 502 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l--------------------------------------- 542 (954)
|+.|++||||+||+|||+.+||.+||.+|++..+....-.+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997643221111
Q ss_pred ------cCcccccccCcccHHHHh-----hhcceEEecChhhHHHHHHHHhhC-CCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 543 ------LGQDKDASIAALPVDELI-----EKADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 543 ------~g~~~~~~~~~~~~~~~~-----~~~~vfarvsP~qK~~iV~~lq~~-g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
.|......++++....++ .++.+|||++|.||+.+|+..++. +.+++++|||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 011111111111111111 145689999999999999999854 99999999999999999999999999
Q ss_pred c--cchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc----cHHHHHHH
Q 002203 611 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDF----SPFMVLII 684 (954)
Q Consensus 611 g--~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~----~~~~il~i 684 (954)
+ +|.+|++ +||+.+.+++|...+.+| ||||.|.|+.+++.|.+++|+...+..+++.++.+|.. .++++.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 6777666 999999999999998888 99999999999999999999999999999998877643 33444444
Q ss_pred HHhhcc-cccccccCCCCCC-------C-------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Q 002203 685 AILNDG-TIMTISKDRVKPS-------P-------QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (954)
Q Consensus 685 ~l~~d~-~~~~l~~d~~~~~-------~-------~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (954)
|++... +++.++.-..+.+ | ....++ .+.|+.+++.|+++++++|++++..+... .....|
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~-~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G-- 973 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFN-WKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNG-- 973 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccc-hHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCC--
Confidence 444433 3455543222111 1 112233 45566777889999999998877766432 111112
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhhcc---------cccccCcc
Q 002203 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYANW---------SFARIEGC 820 (954)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 820 (954)
.+.+....-+.+|+.+++...+. ...-+.+|.|+++. .+++.++..++.+++.--+++ ++......
T Consensus 974 -~~~d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i---~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~ 1048 (1151)
T KOG0206|consen 974 -LTADYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHI---VIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLS 1048 (1151)
T ss_pred -CcCChhhccceEEEEEEEEEEee-eeeeehheeHHHHH---HHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhc
Confidence 11112222233343333333332 22334457665544 222333222222222110000 11112223
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHhHhhcCCcchhh
Q 002203 821 GWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDT 857 (954)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~ 857 (954)
...+|+++++..+++++|+-.+|.+.+..+|...+..
T Consensus 1049 ~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1049 SPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred CchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 4457888889999999999999999988887665543
No 23
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-84 Score=770.84 Aligned_cols=502 Identities=28% Similarity=0.397 Sum_probs=436.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe-CCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecC
Q 002203 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD 177 (954)
Q Consensus 99 ~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R-dg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~ 177 (954)
.+++.|++++.+...++.+...|+++++++|++..|.++++++ ||++++||.++|+|||+|.|++||+||+||++++|
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G- 253 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSG- 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeC-
Confidence 6777888888999999999999999999999999999997776 56699999999999999999999999999999999
Q ss_pred ceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHHHHHHH
Q 002203 178 PLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSI 256 (954)
Q Consensus 178 ~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i 256 (954)
...||||+|||||.||.|.+||.||+||.+.+|..+..|+++|.+|.+++|.+++++++ ++++.|+..+++..+++..+
T Consensus 254 ~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 254 SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 56899999999999999999999999999999999999999999999999999999884 88999999999999887755
Q ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCC
Q 002203 257 AVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 336 (954)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKT 336 (954)
++..++.+++++.....+|..++..++++++++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 55444444433333346788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCCCcceEEEE
Q 002203 337 GTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTY 416 (954)
Q Consensus 337 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 416 (954)
||||+|+++|.+... .. + ++++++.+++..+..++ ||+..|+++++.+.. ....+..+.+|- +.....
T Consensus 414 GTLT~G~p~v~~v~~--~~-~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G----~Gv~~~- 481 (713)
T COG2217 414 GTLTEGKPEVTDVVA--LD-G-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG----RGVEAE- 481 (713)
T ss_pred CCCcCCceEEEEEec--CC-C-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc----CcEEEE-
Confidence 999999999998763 22 3 77889999888777666 999999999765322 111122233331 111111
Q ss_pred EcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCc
Q 002203 417 IDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 496 (954)
Q Consensus 417 ~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~ 496 (954)
.+| ..+..|++..+.+.-. +... .....+.+.++|..++.++.+. +++|+++++|++||
T Consensus 482 --v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~ 540 (713)
T COG2217 482 --VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRP 540 (713)
T ss_pred --ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCCh
Confidence 255 5667799988764221 1111 4556778888999988898865 89999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHH
Q 002203 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYE 576 (954)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~ 576 (954)
|++++|++||+.|+++.|+||||..+|.++|+++||++ ++|.+.||||.+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK~~ 590 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDKAE 590 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHHHH
Confidence 99999999999999999999999999999999999942 699999999999
Q ss_pred HHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHH
Q 002203 577 IVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 656 (954)
Q Consensus 577 iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~ 656 (954)
+|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++++++.++.+++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002203 657 ITIRIVLG 664 (954)
Q Consensus 657 ~ni~~~~~ 664 (954)
+|...+..
T Consensus 671 yn~~~ipl 678 (713)
T COG2217 671 YNAIAIPL 678 (713)
T ss_pred HHHHHHHH
Confidence 99865543
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4e-80 Score=754.97 Aligned_cols=499 Identities=26% Similarity=0.360 Sum_probs=435.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeec
Q 002203 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (954)
Q Consensus 97 ~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g 176 (954)
.|.+++.++++++++..++.++++|+++.+++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 68888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002203 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (954)
Q Consensus 177 ~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (954)
...||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.+++++++ +++++|+.+++++.+++..
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999998874 7899999999999987766
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCC
Q 002203 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (954)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DK 335 (954)
+++..++.+++++...+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 55544444433334445678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCCCcceEEE
Q 002203 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (954)
Q Consensus 336 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 415 (954)
|||||+|+|+|.+... + .+.++++++.+++..+.. ..||++.|+++++... +. .+||.+..+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~--~-~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP--A-TGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe--c-CCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988652 2 245677788877665443 4599999999876421 11 24666666555321
Q ss_pred -EE-cCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCC
Q 002203 416 -YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (954)
Q Consensus 416 -~~-~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~ 493 (954)
++ ..+|+. +..|+|+.+.+ ..+.+.+.++++.++|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 235543 44689988754 11334455678899999999999854 89999999999
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhh
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~q 573 (954)
+|||++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 267789999
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002203 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (954)
Q Consensus 574 K~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~ 653 (954)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+|+++++||++++++++..++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002203 654 AVSITIRIVL 663 (954)
Q Consensus 654 ~l~~ni~~~~ 663 (954)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.7e-78 Score=715.65 Aligned_cols=474 Identities=36% Similarity=0.537 Sum_probs=416.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEE
Q 002203 105 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182 (954)
Q Consensus 105 ~~~~~i~~~i~~~~e~~a~~~~~~l~~--~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~Vd 182 (954)
+++++++..++.+++++++++.++|++ ..+++++|+||| +++|++++|+|||+|.+++||+|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 356678889999999999999999998 788899999999 99999999999999999999999999999999 79999
Q ss_pred eecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002203 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGI 260 (954)
Q Consensus 183 eS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 260 (954)
||+|||||.|+.|.+||.+++||.+.+|+..+.|+.+|.+|..+++..++.+.. .++++++..+++. .++++++++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998775 4788899999998 45444333322
Q ss_pred HHHHHHhhhcccc--chHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCc
Q 002203 261 VAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 338 (954)
Q Consensus 261 ~~~~~~~~~~~~~--~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGT 338 (954)
++.++.++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222222211112 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCCCcceEEEEEc
Q 002203 339 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYID 418 (954)
Q Consensus 339 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 418 (954)
||+|+|+|.++... . + .....||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987641 1 0 123459999999987742 123567999999999998875
Q ss_pred CCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccH
Q 002203 419 SDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDS 498 (954)
Q Consensus 419 ~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~ 498 (954)
.++ .++||+++.+.+.|.. +.+.+++++++|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 2334556888999999999876 7999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHH
Q 002203 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIV 578 (954)
Q Consensus 499 ~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV 578 (954)
+++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002203 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 658 (954)
Q Consensus 579 ~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~n 658 (954)
+.+|++|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002203 659 IRIVLGFM 666 (954)
Q Consensus 659 i~~~~~~~ 666 (954)
+..++..+
T Consensus 475 ~~~~~~a~ 482 (499)
T TIGR01494 475 LILIPLAA 482 (499)
T ss_pred HHHHHHHH
Confidence 87555443
No 26
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-79 Score=677.12 Aligned_cols=762 Identities=21% Similarity=0.264 Sum_probs=531.2
Q ss_pred HHHHhcCCCccCcccccHH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCC-CchhhHHHHHHHHHHHHHHHHHHH
Q 002203 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRD-PDWQDFVGIIVLLVINSTISFIEE 119 (954)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~aail~~~l~~~~~~~-~~~~~~~~I~~~~~i~~~i~~~~e 119 (954)
.++++|-+|.+...|++.+ ..+++||.-.++.++++.++.+++.....+.. .+|...++++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999887643 56678888888888888888887643333322 244444445555555555555555
Q ss_pred HHHHHHHHHHhhcCCCeEEEE-eCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecC----ceEEEeecccCCCccee
Q 002203 120 NNAGNAAAALMANLAPKTKVL-RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (954)
Q Consensus 120 ~~a~~~~~~l~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~----~~~VdeS~LTGEs~pv~ 194 (954)
+++.+.. +..+.+++ |||...+ |++++++||+|.++.+++||||.++++.+ .|.|-+-.|+||+..+-
T Consensus 154 ~~rd~~~------Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDREL------NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhh------hhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 5554432 23444444 7776655 99999999999999999999999999542 59999999999997776
Q ss_pred cCC-----------------------------------------------CCcccccceeecCeEEEEEEEecchhHHhh
Q 002203 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (954)
Q Consensus 195 K~~-----------------------------------------------~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gk 227 (954)
|-| .|+++++|.+.+|.+.|+|++||.+|+
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 643 257899999999999999999999996
Q ss_pred HHHhhhcc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 002203 228 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (954)
Q Consensus 228 i~~l~~~~---~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~ 304 (954)
..++.+ .+.+.++..+|.+.+++.+.+++..+ +++.....+..|...+.+++.++...||++|-+.+.++..+
T Consensus 304 --svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 304 --SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred --HHhccCCcccccceeeeecccHHHHHHHHHHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 234433 36677888889888876655444222 22233345677888899999999999999999999999999
Q ss_pred HHHHhhcC----CceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCCh--------------------
Q 002203 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (954)
Q Consensus 305 ~~~~l~~~----~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------------------- 360 (954)
-++.+.++ |.++|..+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 99888775 578999999999999999999999999999999999876433221111
Q ss_pred ---------------HHHHHHHHHHccccC-----------cChHHHHHHHhcC-----------------ChhhhhcCc
Q 002203 361 ---------------EHVILLAARASRTEN-----------QDAIDAAIVGMLA-----------------DPKEARAGV 397 (954)
Q Consensus 361 ---------------~~~l~~a~~~~~~~~-----------~~~~~~ai~~~~~-----------------~~~~~~~~~ 397 (954)
+.+..+|.|++..+. ..|.+.|+++... ++......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 122233333322211 1233333332111 111122478
Q ss_pred eEEEeecCCCCCcceEEEEEcC-CCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCC
Q 002203 398 REVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKE 476 (954)
Q Consensus 398 ~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~ 476 (954)
++++.+||+|+.|||.++++++ .|++..|.|||+.++....+. .+++++....||++|+|||.+|.|.+++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999986 689999999999998877654 35777788899999999999999999876521
Q ss_pred --------------------------CCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002203 477 --------------------------SPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (954)
Q Consensus 477 --------------------------~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 530 (954)
.+|.+|+++|+++.||++|+|++.+++.||+|||||||+|||+.+||+.||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 468999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccc----------------Cccc-ccccCccc-----------HHHHhh--hcceEEecChhhHHHHHHH
Q 002203 531 GMGTNMYPSSSLL----------------GQDK-DASIAALP-----------VDELIE--KADGFAGVFPEHKYEIVKR 580 (954)
Q Consensus 531 Gi~~~~~~~~~l~----------------g~~~-~~~~~~~~-----------~~~~~~--~~~vfarvsP~qK~~iV~~ 580 (954)
++........++. +... .--++++. +-++.. .+.++||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 9865322111110 0000 00123332 233322 2468999999999999999
Q ss_pred HhhC-CCEEEEECCCccCHHhhhhCCeeEEe-c-cchHHHHhccCEEEcCCCchhHHHHHH-HhHHHHHHHHHHHHHHHH
Q 002203 581 LQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVS 656 (954)
Q Consensus 581 lq~~-g~~V~m~GDG~NDapALk~AdVGIam-g-~gtd~A~~aADivL~~~~~~~i~~ai~-~gR~~~~~i~~~i~~~l~ 656 (954)
+|+. |..|+++|||.||+.|+++||+||++ | +|.+|. -|||+.+++ |+.+-.++. |||..|+|-.+.-+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQAS-LAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQAS-LAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccc-hhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 89999999999999999999999999 6 566555 599999987 555555443 899999999998888766
Q ss_pred HHHHHHHHHHHHHHhhcCCccH-------HHHHHHHHhhcccccccccCCCCCC----CCCCchh--------HHHHHHH
Q 002203 657 ITIRIVLGFMLIALIWKFDFSP-------FMVLIIAILNDGTIMTISKDRVKPS----PQPDSWK--------LKEIFAT 717 (954)
Q Consensus 657 ~ni~~~~~~~~~~~~~~~~~~~-------~~il~i~l~~d~~~~~l~~d~~~~~----~~p~~~~--------~~~~~~~ 717 (954)
....+..+..++... +.|.| +++.+..+.+-.+..++-.|+.-.+ ..|+-++ ..+-|..
T Consensus 853 RGL~Is~~Qavfs~v--~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~i 930 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSV--FYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFI 930 (1051)
T ss_pred hhHHHHHHHHHHHHH--hhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhh
Confidence 555444333332221 11222 2333444444444566666654322 1122111 1234555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHHh-hhccCCCCcccChhHHHHHHH
Q 002203 718 GVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIF-VTRSRSWSFIERPGLLLATAF 796 (954)
Q Consensus 718 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~i~-~~r~~~~~~~~~~~~~l~~~~ 796 (954)
++++.+|++.+.+.++++.+.+.|+ ...++.|..+.+....++. -+++ |.| .++++-
T Consensus 931 wvLISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~t--w~~------~m~vae 988 (1051)
T KOG0210|consen 931 WVLISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRT--WHW------LMVVAE 988 (1051)
T ss_pred hhhHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhh--hhH------HHHHHH
Confidence 5677999998888766655543332 2335566666666655543 3333 432 333444
Q ss_pred HHHHHHHHHH----HHhhcccccccCcchHhHHHHHHHHHHHHHHHHHHHHHHhHhhcCCcch
Q 002203 797 VIAQLVATFI----AVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAW 855 (954)
Q Consensus 797 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~ 855 (954)
++++.+..+- --|..+.| -.+|.+++.+.++.++..+|..+.|.++|+..||+.-
T Consensus 989 ~lsL~~Yivsl~~l~~yfd~~f----~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYa 1047 (1051)
T KOG0210|consen 989 LLSLALYIVSLAFLHEYFDRYF----ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYA 1047 (1051)
T ss_pred HHHHHHHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchh
Confidence 4333222111 11111111 1356666666677888889999999999999888754
No 27
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-79 Score=708.53 Aligned_cols=539 Identities=24% Similarity=0.336 Sum_probs=448.2
Q ss_pred CCchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCe-EEEEecCCcCCCcEEEEeCCCeeccceE
Q 002203 95 DPDWQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADAR 172 (954)
Q Consensus 95 ~~~~~~-~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~-~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ 172 (954)
+..|+| ..+++.++.+...++.....++..++..|++..|.++.++.+|+ .++||.+.|++||+|.|++|++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 334444 44555667777777777788888999999999999999999997 8999999999999999999999999999
Q ss_pred EeecCceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHH
Q 002203 173 LLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNF 251 (954)
Q Consensus 173 ll~g~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~ 251 (954)
+++| +++||||.+|||+.||.|++|+.|.+||.+.+|.....++++|.+|.+++|.+++++++ .+.|.|+.+|+++.+
T Consensus 417 Vv~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 417 VVDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EEeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 9999 58999999999999999999999999999999999999999999999999999999985 889999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhccc----------cchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCch
Q 002203 252 CICSIAVGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 321 (954)
Q Consensus 252 ~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~ 321 (954)
+...+++..++.++++..+.. ..+..++..++++++++|||+|.+++|++.+.|....+++|+++|..++
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~ 575 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEA 575 (951)
T ss_pred CCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHH
Confidence 766555533333333322211 3455677888999999999999999999999999999999999999999
Q ss_pred hhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEE
Q 002203 322 IEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVH 401 (954)
Q Consensus 322 iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~ 401 (954)
+|.+.+++++.||||||||+|++.|.+... +....+..+++.+++..+... .||+..|++.++.........-..++
T Consensus 576 LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~ 652 (951)
T KOG0207|consen 576 LEKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLS 652 (951)
T ss_pred HHHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccce
Confidence 999999999999999999999999998764 333356667776666554443 49999999999864331111112223
Q ss_pred eecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCC
Q 002203 402 FLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAP 481 (954)
Q Consensus 402 ~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~ 481 (954)
+..|....+...+. .+|+. .+-|.-+.+... .....+.++..+++-...|..+.+++...
T Consensus 653 ~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~---~~~~~~~i~~~~~~~e~~g~tvv~v~vn~------------ 712 (951)
T KOG0207|consen 653 FEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRN---GCSIPDDILDALTESERKGQTVVYVAVNG------------ 712 (951)
T ss_pred eecccCCCcccceE---EeeeE--EeechHHHHHhc---CCCCchhHHHhhhhHhhcCceEEEEEECC------------
Confidence 33333332221122 23433 667888876642 22234557777788888999999999987
Q ss_pred ceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhh
Q 002203 482 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561 (954)
Q Consensus 482 l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 561 (954)
+++|++.++|++|||+..+|+.||+.||++.|+||||..+|+++|+++|+.
T Consensus 713 -~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------- 763 (951)
T KOG0207|consen 713 -QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------- 763 (951)
T ss_pred -EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------
Confidence 899999999999999999999999999999999999999999999999963
Q ss_pred hcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhH
Q 002203 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 641 (954)
Q Consensus 562 ~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR 641 (954)
+|+|.+.|+||.++||.+|++++.|+|+|||+||+|||.+|||||+|+.|+|+|.++|||||+.+++..++.++..+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 379999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhh
Q 002203 642 AIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILN 688 (954)
Q Consensus 642 ~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~ 688 (954)
++++|+|.|+.|++.+|+..++...+.++.|++.++|++--..-.++
T Consensus 842 kt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~S 888 (951)
T KOG0207|consen 842 KTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAAS 888 (951)
T ss_pred HHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhh
Confidence 99999999999999999876666666666666778887644443333
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.1e-75 Score=699.75 Aligned_cols=516 Identities=27% Similarity=0.378 Sum_probs=434.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCC-eEEEEecCCcCC
Q 002203 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVP 155 (954)
Q Consensus 77 il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg-~~~~I~~~~Lv~ 155 (954)
++.++++++++++ .|.++..|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 4456667777765 88999999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhcc
Q 002203 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (954)
Q Consensus 156 GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 235 (954)
||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999998876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCc
Q 002203 236 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (954)
Q Consensus 236 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~i 314 (954)
.+++++|+.+++++++++..++++.++.+++.+ ..... ..+..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~-~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWL-ALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 478899999999998876655443333333322 22222 78889999999999999999999999999999999999
Q ss_pred eeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCC--hHHHHHHHHHHccccCcChHHHHHHHhcCChhh
Q 002203 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKE 392 (954)
Q Consensus 315 lvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~ 392 (954)
++|+++++|+||++|++|||||||||+|+|+|.+... . .+.+ +++++.+++.++.. ..||++.|++.++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999988753 1 1223 66777776655544 459999999988753211
Q ss_pred hhcCce-EEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecC
Q 002203 393 ARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIP 471 (954)
Q Consensus 393 ~~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~ 471 (954)
.... + ..+++| .+.....+ +|. ..+..|+++.+ + ... .+ ....+..++.++++|+|+++++++.
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 11222221 342 34567888876 1 111 11 1223455677889999999999753
Q ss_pred CCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCC-CEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccc
Q 002203 472 EKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (954)
Q Consensus 472 ~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~ 550 (954)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++..+++++|+..
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------- 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------- 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------
Confidence 899999999999999999999999999 9999999999999999999999842
Q ss_pred cCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCc
Q 002203 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 630 (954)
Q Consensus 551 ~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~ 630 (954)
+|+++.|++|.++++.+|+.++.|+|+|||.||+||+++|||||++|++++.++++||+++.++++
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 663 (954)
Q Consensus 631 ~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~ 663 (954)
+.++.++++||++++||++++.|++.+|+..+.
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986543
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=8.8e-76 Score=696.48 Aligned_cols=498 Identities=30% Similarity=0.415 Sum_probs=426.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCC
Q 002203 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (954)
Q Consensus 77 il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~G 156 (954)
++.++++++++++ +|.++.+|+++++++..+++++++|+++.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777888775 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhcc-
Q 002203 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (954)
Q Consensus 157 DIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 235 (954)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 5799999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCce
Q 002203 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (954)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~il 315 (954)
.+++++|+.+++++++++..+++..++.+++.+... .+..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 478899999999998876665554444333333222 223378889999999999999999999999999999999999
Q ss_pred eccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhc
Q 002203 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (954)
Q Consensus 316 vk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (954)
+|+++++|++|++|++|||||||||+|+|+|.+... .+++.+++..+. ...||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999987642 256776664443 445999999998865321
Q ss_pred CceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC
Q 002203 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (954)
Q Consensus 396 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~ 475 (954)
.....+.+|. +..... .+|+. +..|+++.+.+.. .+.+..+|.+++.++.+
T Consensus 300 ~~~~~~~~~g----~gi~~~---~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~------- 350 (536)
T TIGR01512 300 NVESVEEVPG----EGVRAV---VDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARD------- 350 (536)
T ss_pred CCcceEEecC----CeEEEE---ECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEEC-------
Confidence 1222222221 111111 24543 4468887653311 01456678888877754
Q ss_pred CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC-EEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcc
Q 002203 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (954)
Q Consensus 476 ~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 554 (954)
.+++|.+.++|++|||++++|++|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 351 ------~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------- 404 (536)
T TIGR01512 351 ------GTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------------- 404 (536)
T ss_pred ------CEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------
Confidence 38999999999999999999999999999 999999999999999999999842
Q ss_pred cHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEec-cchHHHHhccCEEEcCCCchhH
Q 002203 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 633 (954)
Q Consensus 555 ~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg-~gtd~A~~aADivL~~~~~~~i 633 (954)
+|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| ++++.++++||+++.+++++.+
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 48888999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002203 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVL 663 (954)
Q Consensus 634 ~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~ 663 (954)
.+++.+||++++|+++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975443
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=5.4e-75 Score=692.00 Aligned_cols=506 Identities=26% Similarity=0.387 Sum_probs=423.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeC-CeEEEEecCCcCCCcEEEEeCCCeeccceEEee
Q 002203 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (954)
Q Consensus 97 ~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd-g~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~ 175 (954)
+|.....++++++++..++.+.++|+++++++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4445556677777888889899999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002203 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 254 (954)
Q Consensus 176 g~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~ 254 (954)
| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5799999999999999999999999999999999999999999999999999999876 4789999999999988766
Q ss_pred HHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeC
Q 002203 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (954)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~D 334 (954)
.+++..++ .++.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~-~~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALI-TFVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHH-HHHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 54442222 22222 24788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCCCcceEE
Q 002203 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (954)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 414 (954)
||||||+|+|++.+... + .+.++++++.+++..+... .||++.|++.++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~--~-~~~~~~~~l~~aa~~e~~s-~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV--F-GDRDRTELLALAAALEAGS-EHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec--C-CCCCHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998653 2 2456677888877666544 49999999988742211011111122222 122222
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCC
Q 002203 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (954)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~l 494 (954)
. .+| ..+..|+++.+.+.. .. +.++.++|.+++.++... +++|++.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~---~~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENA---IK--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCC---CC--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 2 245 346789999864321 11 112457899999888654 899999999999
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhH
Q 002203 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (954)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK 574 (954)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 3788899999
Q ss_pred HHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002203 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (954)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~ 654 (954)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.++++..++.+++.||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccHH
Q 002203 655 VSITIRIVLGFMLIALIWKFDFSPF 679 (954)
Q Consensus 655 l~~ni~~~~~~~~~~~~~~~~~~~~ 679 (954)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999865554444444444445553
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=7.3e-74 Score=713.33 Aligned_cols=519 Identities=24% Similarity=0.307 Sum_probs=434.6
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeec
Q 002203 98 WQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (954)
Q Consensus 98 ~~~-~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g 176 (954)
|++ +..+++++.+...++.+.+.|+.+++++|++..|++++|+|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 444 6777888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002203 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 255 (954)
Q Consensus 177 ~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 255 (954)
.+.||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|++.++++++ .+++++|+..++++.+++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999887 47889999999999887655
Q ss_pred HHHHHHHHHHHhhhcccc--chHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEe
Q 002203 256 IAVGIVAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 333 (954)
Q Consensus 256 i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~ 333 (954)
+++..++.++ .|.+.+. .+...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++||
T Consensus 444 v~~~a~~~~~-~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAA-IWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHH-HHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 5443333222 2322222 255678889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCCCCcceE
Q 002203 334 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 413 (954)
Q Consensus 334 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~s 413 (954)
|||||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.+. ... ...+|.....+ .
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g~-G 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDM-----TLP--QVNGFRTLRGL-G 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhC-----CCC--CcccceEecce-E
Confidence 999999999999987652 12456777777777665544 499999998876421 010 11122222211 1
Q ss_pred EEEEcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCC
Q 002203 414 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (954)
Q Consensus 414 v~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~ 493 (954)
+... .+|+ .+.+|+++.+.+.... .+.+.+.+++++++|.+++.++++. +++|++.+.|+
T Consensus 591 v~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 1111 2453 4567999987542211 2345666778889999999999864 79999999999
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhh
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~q 573 (954)
+|||++++|++|++.|+++.|+|||+..+|..+++++|+.. +|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHH
Confidence 99999999999999999999999999999999999999842 589999999
Q ss_pred HHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002203 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (954)
Q Consensus 574 K~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~ 653 (954)
|.++++.+|++++.|+|+|||.||+|||++||+||+||+|++.++++||++++++++..|+.++++||+++++|++++.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCccHHH
Q 002203 654 AVSITIRIVLGFMLIALI-WKFDFSPFM 680 (954)
Q Consensus 654 ~l~~ni~~~~~~~~~~~~-~~~~~~~~~ 680 (954)
++.+|+..+...+..+.. +++.++|+.
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~ 808 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVV 808 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHH
Confidence 999998655433322111 233466664
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-72 Score=633.15 Aligned_cols=571 Identities=25% Similarity=0.301 Sum_probs=427.7
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHHhcCCCccCcccccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCchhh
Q 002203 22 IPIEEVFEQLKCSREGLTS-DEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQD 100 (954)
Q Consensus 22 ~~~~~~~~~l~~~~~GLs~-~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~~~~ 100 (954)
.|.++.+..++. .+|+.. +|++.-.++||.|+.+-..+++-..|.+.-..|+ ++|.+..+.-|.+. .+|+.
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 445554444443 356663 3444444569999999999999889999999999 66777766667765 47887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeC---CCeeccceEEeecC
Q 002203 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGD 177 (954)
Q Consensus 101 ~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~---Gd~VPaD~~ll~g~ 177 (954)
.+.-+++++..-.--.+|+.+.-+.... |..-+....|.|+++|+.+.++||.|||+|.|.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7766655554444334455544433332 3344667899999999999999999999999987 6789999999999
Q ss_pred ceEEEeecccCCCcceecCCC-----------------Ccccccceeec-------------CeEEEEEEEecchhHHhh
Q 002203 178 PLKIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 227 (954)
Q Consensus 178 ~~~VdeS~LTGEs~pv~K~~~-----------------~~v~~Gs~v~~-------------G~~~~~V~~tG~~T~~gk 227 (954)
+|.||||+|||||.|.-|.+- ..+|.||.+++ |.+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 689999999999999999762 36899999876 569999999999999998
Q ss_pred HHHhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc------cchHHHHHHHHHHHHhhcCCchhHHHHH
Q 002203 228 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSV 300 (954)
Q Consensus 228 i~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~l~lli~~iP~aLp~~~~i 300 (954)
+.+.+-- +++.+.-.+ ..+ .+++++++ +++....|.+.. ++-...+.-+..++...+|.-||+-+++
T Consensus 378 LvRtilf~aervTaNn~--Etf--~FILFLlV--FAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNR--ETF--IFILFLLV--FAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred eeeeEEecceeeeeccH--HHH--HHHHHHHH--HHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH
Confidence 8775543 333221111 111 11111111 111222333221 1222345556667788899999999999
Q ss_pred HHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecc-------cCCChHHHHHHHHHHccc
Q 002203 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-------KGVEKEHVILLAARASRT 373 (954)
Q Consensus 301 ~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~-------~~~~~~~~l~~a~~~~~~ 373 (954)
+.-.+...|+|.+++|..+-.+.-.|++|+.|||||||||+..|.|...--..-. ...+.+.+..+|++++-.
T Consensus 452 AVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 452 AVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999864320000 011234455566555422
Q ss_pred -----cCcChHHHHHHHhcCChhh----------hhcCceEEEeecCCCCCcceEEEEEcCC----CcEEEEEcCcHHHH
Q 002203 374 -----ENQDAIDAAIVGMLADPKE----------ARAGVREVHFLPFNPVDKRTALTYIDSD----GNWHRASKGAPEQI 434 (954)
Q Consensus 374 -----~~~~~~~~ai~~~~~~~~~----------~~~~~~~l~~~pF~s~~kr~sv~~~~~~----g~~~~~~KGa~e~i 434 (954)
-.+||++.|.++.++..-+ ...+.++.+.+.|+|.-|||+++..... -+++..+|||||.|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 2369999999988742211 1124677888999999999999875321 36889999999999
Q ss_pred HHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCC--------CCCCCCCCCceEEEEeccCCCCCccHHHHHHHHH
Q 002203 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRAL 506 (954)
Q Consensus 435 l~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~--------~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~ 506 (954)
-++.. ++++.+++...+|+++|.||||++||+++. -.+|+.|.+|+|.|++.|.-|+|+|++++|+.|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 98876 567788888999999999999999999873 2467899999999999999999999999999999
Q ss_pred hCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC--------------c-------------------------ccCccc
Q 002203 507 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--------------S-------------------------LLGQDK 547 (954)
Q Consensus 507 ~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~--------------~-------------------------l~g~~~ 547 (954)
+.+.+|+||||||+.||.++|+++|+..+..+.- . ++|...
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 9999999999999999999999999965411000 0 011111
Q ss_pred ccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEec
Q 002203 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (954)
Q Consensus 548 ~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg 611 (954)
+.-...+.+.+++..+.||||+.|.||..++..|++.|+.++|||||+||+.|||+||||||+=
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 1111222445566778899999999999999999999999999999999999999999999984
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-62 Score=531.18 Aligned_cols=520 Identities=25% Similarity=0.368 Sum_probs=404.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHc----CCCCCCchhhHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhcC-CCeEEE
Q 002203 69 FMWNPLSWVMEAAAIMAIALAN----GGGRDPDWQDFVGIIVLLVINS----TISFIEENNAGNAAAALMANL-APKTKV 139 (954)
Q Consensus 69 ~~~~~~~~il~~aail~~~l~~----~~~~~~~~~~~~~I~~~~~i~~----~i~~~~e~~a~~~~~~l~~~~-~~~~~V 139 (954)
+.+||..++-++.++++.++.. .++....+.....|.+++.+.. .-+.+.|-|.+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 4678888877777777764321 1111123333333333333333 334555555555556666533 345677
Q ss_pred EeC-CeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCC---CcccccceeecCeEEEE
Q 002203 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (954)
Q Consensus 140 ~Rd-g~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~---~~v~~Gs~v~~G~~~~~ 215 (954)
+++ |.++.+++.+|+.||+|.++.||+||+||.++|| ..+||||++||||.||.|.+| +.|-.||.+.+...+..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 8999999999999999999999999999999999 679999999999999999998 67999999999999999
Q ss_pred EEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--ccchHHHHHHHHHHHHhhcCC
Q 002203 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ--HRKYRDGIDNLLVLLIGGIPI 292 (954)
Q Consensus 216 V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~lli~~iP~ 292 (954)
+++.-.+|++.|+..+++.++ +++|-+-.++-+..-+. +++++ ...-.|++. ...-.-.+...++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---liFL~-~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LIFLL-AVATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HHHHH-HHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998774 66765544443221111 11111 111122211 101112456778999999999
Q ss_pred chhHHHHHHHHHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHcc
Q 002203 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (954)
Q Consensus 293 aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 372 (954)
...--++-.-..|+.|+.+.|++.++..++|..|.+|++..|||||+|.|.=.-.+.. ...+.+.+++...|..++.
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhh
Confidence 9888888777789999999999999999999999999999999999999875555544 2457888888877776665
Q ss_pred ccCcChHHHHHHHhcCChh-hhh-cCce-EEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCCh-hHHHHH
Q 002203 373 TENQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKV 448 (954)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~ 448 (954)
..+ .|...+++..+.... +.+ .... ...+.||+.+.+++.+-. ++| ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 433 555566666553211 111 1111 357899998776555432 233 6688999999999876433 367889
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH
Q 002203 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (954)
Q Consensus 449 ~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 528 (954)
+...++-++.|-..|+++... +++|++.++|-++||.+|-+.+||+.|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999999865 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeE
Q 002203 529 RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (954)
Q Consensus 529 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGI 608 (954)
+.|+++ ..|.++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999853 37899999999999999999999999999999999999999999
Q ss_pred EeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHH
Q 002203 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644 (954)
Q Consensus 609 amg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~ 644 (954)
||.+||++||||+.+|=+|.|-..+++.|+.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.3e-35 Score=314.89 Aligned_cols=222 Identities=36% Similarity=0.508 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEE
Q 002203 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 181 (954)
Q Consensus 103 ~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~-~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~V 181 (954)
+|+++++++..+++++++|+++..+++++..+++ ++|+|||+++++++++|+|||+|.|++||.+||||++++.+.+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3677888999999999999999999999988887 999999999999999999999999999999999999999337999
Q ss_pred EeecccCCCcceecC-----CCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002203 182 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (954)
Q Consensus 182 deS~LTGEs~pv~K~-----~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (954)
|||+||||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|+.|++.+.+.... +++++++.++++..+++..
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887765 5689999999999887655
Q ss_pred HHHHHHHHHHHhhh-ccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHhhcCCceeccCchhhh
Q 002203 256 IAVGIVAEIIIMYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (954)
Q Consensus 256 i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~l~~~~ilvk~~~~iE~ 324 (954)
++++.++.+++.+. ....++...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 54433333322222 2456778889999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=3e-26 Score=241.16 Aligned_cols=211 Identities=32% Similarity=0.415 Sum_probs=152.3
Q ss_pred ceEEEeCCCCccccCceeeeeeeeeecccCCChHHHHHHHHHHccccCcChHHHHHHHhcCChhhhhcCceEEEeecCCC
Q 002203 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (954)
Q Consensus 328 v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s 407 (954)
|++||||||||||+|+|.+ . . .+...++..+...... ..||+..++..+....... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~-s~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQG-SEHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCT-STSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhc-CCCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999999 1 1 3445555555444433 3499999998876543221 11 112222
Q ss_pred CCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcCChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEE
Q 002203 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (954)
Q Consensus 408 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGl 487 (954)
...++..... ++. +. |.++.+.+..... . ............|...+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--I--SPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--c--ccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222222211 122 22 8888877655421 1 111122223455656666654 4589999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEE
Q 002203 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (954)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 567 (954)
+.+.|+||||++++|+.|+++|++++|+|||+..+|.++++++||.+ ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred ec--ChhhH--HHHHHHHhhCCCEEEEECCCccCHHhhhhCC
Q 002203 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (954)
Q Consensus 568 rv--sP~qK--~~iV~~lq~~g~~V~m~GDG~NDapALk~Ad 605 (954)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.58 E-value=8.8e-15 Score=134.30 Aligned_cols=123 Identities=26% Similarity=0.394 Sum_probs=106.9
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhh
Q 002203 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (954)
Q Consensus 483 ~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 562 (954)
...+.++---++=++++++|++|++. ++|.+.|||...+-...|.-.||+.+
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777778889999999999999 99999999999999999999998642
Q ss_pred cceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe-c--cchHHHHhccCEEEcCCCchhHHHH
Q 002203 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 636 (954)
Q Consensus 563 ~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam-g--~gtd~A~~aADivL~~~~~~~i~~a 636 (954)
++||..-|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +..+-+.++||+|+-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47999999999999999999999999999999999999999999987 4 4566788999999854 3444443
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.39 E-value=7.8e-13 Score=113.09 Aligned_cols=67 Identities=37% Similarity=0.553 Sum_probs=61.3
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCc-ccccHHHHHHHhhhhhHHHHHHHHHHHH
Q 002203 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNPLSWVMEAAAIMA 85 (954)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~-~~~~~~~~~l~~~~~~~~~il~~aail~ 85 (954)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++++.|..|+++|.+|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7899999999999965 78999999999999999999965 5578899999999999999999999986
No 38
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.20 E-value=2.5e-10 Score=117.32 Aligned_cols=166 Identities=16% Similarity=0.171 Sum_probs=111.3
Q ss_pred cCCccHHHHHHHHHhhccc-ccccccCCCCCC-----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 002203 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (954)
Q Consensus 673 ~~~~~~~~il~i~l~~d~~-~~~l~~d~~~~~-----~~p--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (954)
|.|++|+|++|+|+++|.+ +++++.|+++++ |++ ++...++.+...+..|+++++++++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5689999999999999998 799999998764 221 222345566677888999999999888766541
Q ss_pred ccccccc--CCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc----ChhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002203 745 AFGVRSL--RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE----RPGLLLATAFVIAQLVATFIAVYAN--WSFAR 816 (954)
Q Consensus 745 ~~g~~~~--~~~~~~~~t~~f~~~~~~~~~~i~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 816 (954)
+|.... ..+....+|++|..+++++.++.+++|+++.+.+. +.+.+++.+++++.++.. +.+|.+ ...++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~-~i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQI-LIVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHH-HHHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHH-HHhcchhhHhhhc
Confidence 121110 11244689999999999999999999996543221 134467777666655543 335543 23355
Q ss_pred cCcchHhHHHHHHHHHHHHHHHHHHHHHH
Q 002203 817 IEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (954)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 845 (954)
+.+.++.+|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 66777777777789999999999999974
No 39
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.16 E-value=1e-08 Score=116.35 Aligned_cols=209 Identities=18% Similarity=0.243 Sum_probs=143.4
Q ss_pred CceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-----------CCCcc-------
Q 002203 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSSSL------- 542 (954)
Q Consensus 481 ~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-----------~~~~l------- 542 (954)
+-.|.|++...-++|++.-..|+.|-++-|+.+-.+-.+....+-.|.++||..... |....
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 347899999999999999999999999999999999999999999999999954211 11000
Q ss_pred cCc----------------c---ccc-----------cc--------CcccHHHH----------hh-------hcceEE
Q 002203 543 LGQ----------------D---KDA-----------SI--------AALPVDEL----------IE-------KADGFA 567 (954)
Q Consensus 543 ~g~----------------~---~~~-----------~~--------~~~~~~~~----------~~-------~~~vfa 567 (954)
.++ + .+. .+ .+....++ ++ -+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 000 0 000 00 00001110 00 112588
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCccCHH--hhhhCCeeEEecc-------------chHH-HHhccC---------
Q 002203 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAP--ALKKADIGIAVAD-------------ATDA-ARSASD--------- 622 (954)
Q Consensus 568 rvsP~qK~~iV~~lq~~g~~V~m~GDG~NDap--ALk~AdVGIamg~-------------gtd~-A~~aAD--------- 622 (954)
.++|+.-.++++.+|++|++|+..|.-.|-.. -.-+|||+|++.. ++.. -.+|+|
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 99999999999999999999999999988543 4478999999852 1111 112333
Q ss_pred --------EEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHhhc
Q 002203 623 --------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILND 689 (954)
Q Consensus 623 --------ivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~~~~~~~~~il~i~l~~d 689 (954)
+-+-...+-+|..+|+..|....-+|+.+.|.+.......+..+... ++.+..|+--+++|...|--
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 22222334567888889999999999999999888776555555444 45566677777777776654
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.09 E-value=2.1e-10 Score=96.61 Aligned_cols=60 Identities=43% Similarity=0.708 Sum_probs=53.9
Q ss_pred HcCCCCC-CCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 002203 30 QLKCSRE-GLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (954)
Q Consensus 30 ~l~~~~~-GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~aail~~~l~ 89 (954)
.|+++.+ |||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 3667754 99999999999999999998875 788999999999999999999999999863
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.91 E-value=7e-09 Score=108.23 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=97.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.... ........ .....+ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~-an~l~~~~--~g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDD--SDRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhh-ceeeEEec--CCeeEC------------eeecCcc
Confidence 57999999999999975 99999999999999999999986321 11110000 000001 0114578
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHh
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~g 640 (954)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+++.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998666666655555444 4577777776554
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.83 E-value=1.4e-08 Score=113.22 Aligned_cols=131 Identities=19% Similarity=0.278 Sum_probs=98.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.......-.+. +....+.... .-+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~----dg~ltg~v~g---------~iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIM----DGKLTGNVLG---------DIVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEE----CCEEEeEecC---------ccCCcc
Confidence 578999999999999999999999999888889999999853110000000 0000000000 002346
Q ss_pred hHHHHHHHHhhC-C---CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai 637 (954)
.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..++..+
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 899988888754 3 5799999999999999999999999 78888999999999988998887665
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.82 E-value=1.5e-08 Score=107.31 Aligned_cols=129 Identities=21% Similarity=0.284 Sum_probs=94.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe-cCh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-vsP 571 (954)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- +....... +....+ .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998531 11100000 000000 00011 123
Q ss_pred hhHHHHHHHHhhCC----CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHH
Q 002203 572 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (954)
Q Consensus 572 ~qK~~iV~~lq~~g----~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~a 636 (954)
..|..+++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35889999999999999999999985 567788899999999999887653
No 44
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.79 E-value=1e-08 Score=92.64 Aligned_cols=65 Identities=32% Similarity=0.470 Sum_probs=54.3
Q ss_pred CcChHHHHHHHhcC------ChhhhhcCceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhhcC
Q 002203 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 440 (954)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~ 440 (954)
.++|+|.|++.++. +....+..+++++.+||||++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 45899999988763 24557788999999999999999999998 3345677999999999999973
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.67 E-value=1.3e-07 Score=100.76 Aligned_cols=153 Identities=24% Similarity=0.299 Sum_probs=104.0
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-CCCc-c-c---Ccc------------
Q 002203 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-L-L---GQD------------ 546 (954)
Q Consensus 486 Gli~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~~-l-~---g~~------------ 546 (954)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+.+|+..... .... + . +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33433444 67899999999999999999999999999999999999853211 0000 0 0 000
Q ss_pred -----------------cccc--------cCc---ccHHHHhhhcc--e-------EEecChhh--HHHHHHHHhhC---
Q 002203 547 -----------------KDAS--------IAA---LPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQER--- 584 (954)
Q Consensus 547 -----------------~~~~--------~~~---~~~~~~~~~~~--v-------farvsP~q--K~~iV~~lq~~--- 584 (954)
.+.. ... +.+.+.+++.. + +..+.|.. |..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 0000 000 11222222111 1 12334443 77777777654
Q ss_pred -CCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHH
Q 002203 585 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (954)
Q Consensus 585 -g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~ 638 (954)
...+.++||+.||.+|++.|++|+||+++.+.+|++||+|..+++=..+..+++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 245899999999999999999999999999999999999998777777777774
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.66 E-value=8.8e-08 Score=101.21 Aligned_cols=143 Identities=20% Similarity=0.267 Sum_probs=97.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-CCC-cccC--cc------ccc-------------
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSS-SLLG--QD------KDA------------- 549 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~-~l~g--~~------~~~------------- 549 (954)
++.+++.++|++|++.|+++.+.||.....+..+++++++..... ... .+.. .. ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999853211 000 0000 00 000
Q ss_pred --------------ccCc---ccHHHHhhhcc--e-----EEecC--hhhHHHHHHHHhhC-C---CEEEEECCCccCHH
Q 002203 550 --------------SIAA---LPVDELIEKAD--G-----FAGVF--PEHKYEIVKRLQER-K---HICGMTGDGVNDAP 599 (954)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~--v-----farvs--P~qK~~iV~~lq~~-g---~~V~m~GDG~NDap 599 (954)
.... +.+.+.+.+.. + +..++ ...|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 01111222111 1 11223 34788888887664 3 35899999999999
Q ss_pred hhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHH
Q 002203 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (954)
Q Consensus 600 ALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ 635 (954)
|++.|++|+||+++.+.+|+.||+|...++-..+..
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~ 213 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVE 213 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhh
Confidence 999999999999999999999999997665555544
No 47
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.64 E-value=1.4e-07 Score=95.35 Aligned_cols=100 Identities=19% Similarity=0.268 Sum_probs=80.4
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEec--ChhhHHHH
Q 002203 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 577 (954)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarv--sP~qK~~i 577 (954)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 689999999999999999999999999999998521 1111 23333444
Q ss_pred HHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCC
Q 002203 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (954)
Q Consensus 578 V~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~ 629 (954)
++.++-....|+|+||+.||.+|++.|++++||+++.+..+.+||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444433456999999999999999999999999999999999999986544
No 48
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.62 E-value=3e-07 Score=100.30 Aligned_cols=154 Identities=23% Similarity=0.237 Sum_probs=107.0
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC---------CCccc------------
Q 002203 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSSLL------------ 543 (954)
Q Consensus 486 Gli~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~---------~~~l~------------ 543 (954)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.+...+..+.+++|+...... ...+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 889999999999999999999999999999999999999641110 00000
Q ss_pred ---------------Ccc------cc------------------------------cccCcccHHHHh---hh-----cc
Q 002203 544 ---------------GQD------KD------------------------------ASIAALPVDELI---EK-----AD 564 (954)
Q Consensus 544 ---------------g~~------~~------------------------------~~~~~~~~~~~~---~~-----~~ 564 (954)
... .. .....+.+.+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00 000001111111 11 11
Q ss_pred eE-------EecCh--hhHHHHHHHHhhC-CCE---EEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCch
Q 002203 565 GF-------AGVFP--EHKYEIVKRLQER-KHI---CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (954)
Q Consensus 565 vf-------arvsP--~qK~~iV~~lq~~-g~~---V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~ 631 (954)
.+ ..+.| .+|..-++.+.+. |.. |+++||+.||.+||+.|+.||||+++.+.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 22333 2788888888763 543 99999999999999999999999999999999999888888888
Q ss_pred hHHHHHHH
Q 002203 632 VIISAVLT 639 (954)
Q Consensus 632 ~i~~ai~~ 639 (954)
.+..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 88888754
No 49
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.62 E-value=1.3e-07 Score=94.38 Aligned_cols=97 Identities=28% Similarity=0.403 Sum_probs=78.2
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHH
Q 002203 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (954)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~ 580 (954)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998531 1111 234444444
Q ss_pred Hhh----CCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCC
Q 002203 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (954)
Q Consensus 581 lq~----~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~ 629 (954)
+.+ ....+.|+||+.||.+|++.|+++++|.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 432 3457999999999999999999999999888889999999997654
No 50
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.61 E-value=2.4e-07 Score=101.38 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhC-C---CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHH
Q 002203 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (954)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~ 638 (954)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++-..+..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555443 2 45899999999999999999999999999999999999998877777777774
No 51
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.57 E-value=2.9e-07 Score=100.99 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=54.6
Q ss_pred hHHHHHHHHhhC-C---CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCE--EEcCCCchhHHHHHH
Q 002203 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (954)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADi--vL~~~~~~~i~~ai~ 638 (954)
.|..-++.|.+. | ..|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-..+..+++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777777654 3 45899999999999999999999999999999999996 666667777777763
No 52
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.54 E-value=3.1e-07 Score=96.45 Aligned_cols=110 Identities=21% Similarity=0.192 Sum_probs=81.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe-cC
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-vs 570 (954)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...... .+...+ ....+ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~d--G~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDD--GKLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeC--CEEec----------eeeeeecC
Confidence 67899999999999999999999999999999999999999653211 110000 00011 12333 34
Q ss_pred hhhHHHHHHHHhhC-CC---EEEEECCCccCHHhhhhCCeeEEeccchH
Q 002203 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATD 615 (954)
Q Consensus 571 P~qK~~iV~~lq~~-g~---~V~m~GDG~NDapALk~AdVGIamg~gtd 615 (954)
.+.|.+.++.+.+. |. .+.++|||.||.|||+.|+.+|++.....
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence 57899888666653 54 48999999999999999999999974443
No 53
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.54 E-value=4.8e-07 Score=96.12 Aligned_cols=140 Identities=22% Similarity=0.306 Sum_probs=95.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC--CCcc-cCc--------ccc-------------
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSSL-LGQ--------DKD------------- 548 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l-~g~--------~~~------------- 548 (954)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+...... ...+ ... ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996431110 0000 000 000
Q ss_pred --c-----------------ccCcccHHHHhhhcc---------eEEecCh--hhHHHHHHHHhhC-C---CEEEEECCC
Q 002203 549 --A-----------------SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (954)
Q Consensus 549 --~-----------------~~~~~~~~~~~~~~~---------vfarvsP--~qK~~iV~~lq~~-g---~~V~m~GDG 594 (954)
. ..+.+.+.++++... .+..+.| .+|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 000011112222111 1223334 3788888877654 3 468999999
Q ss_pred ccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchh
Q 002203 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (954)
Q Consensus 595 ~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~ 632 (954)
.||.+|++.|++|+||+++.+..|+.||.|..+++-..
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 99999999999999999999999999999987766666
No 54
>PRK10976 putative hydrolase; Provisional
Probab=98.47 E-value=6.6e-07 Score=97.76 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=52.9
Q ss_pred hHHHHHHHHhhC-C---CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccC--EEEcCCCchhHHHHHH
Q 002203 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (954)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aAD--ivL~~~~~~~i~~ai~ 638 (954)
.|..-++.+.+. | ..|+++|||-||.+||+.|+.||||++|.+.+|++|| .|..+++=..+..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666655443 2 4589999999999999999999999999999999988 6776666667777664
No 55
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.43 E-value=1.4e-06 Score=91.25 Aligned_cols=127 Identities=20% Similarity=0.226 Sum_probs=90.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+.++.|+++ +++.++|+.....+..+.+++|+.... .. .+...+ +....+ +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~-~~~~~~-~~~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CH-SLEVDE-DGMITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cc-eEEECC-CCeEEC------------ccccccc
Confidence 4679999999999999 999999999999999999999985311 11 110000 000000 0012378
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCE-EEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADi-vL~~~~~~~i~~ai 637 (954)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999987554444455665 43 4555555443
No 56
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.43 E-value=7.5e-07 Score=91.64 Aligned_cols=108 Identities=24% Similarity=0.306 Sum_probs=82.4
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHH
Q 002203 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (954)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~ 579 (954)
.+|+.|++.|+++.++||.....+..+++++|+... |. ..++|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999997421 11 1134545554
Q ss_pred HHh-hCC---CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCC----chhHHHHHHH
Q 002203 580 RLQ-ERK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLT 639 (954)
Q Consensus 580 ~lq-~~g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~----~~~i~~ai~~ 639 (954)
.+. +.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++-.++ +..+.+.+..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 443 323 46999999999999999999999998888888889999995432 3444444443
No 57
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.40 E-value=9.6e-07 Score=94.71 Aligned_cols=146 Identities=18% Similarity=0.239 Sum_probs=99.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-CCCccc-C-------------------------
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-G------------------------- 544 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~~l~-g------------------------- 544 (954)
..+.+.+.++|++++++|+++.+.||.....+..+..++++..... ....+. .
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4567899999999999999999999999999999999999852111 000000 0
Q ss_pred ----------------cc--ccc------------------------------ccCcccHHHH-------hhhcce----
Q 002203 545 ----------------QD--KDA------------------------------SIAALPVDEL-------IEKADG---- 565 (954)
Q Consensus 545 ----------------~~--~~~------------------------------~~~~~~~~~~-------~~~~~v---- 565 (954)
.. ... ..+.+.+.++ ......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 000 0000111111 111001
Q ss_pred ---EEecCh--hhHHHHHHHHhhC----CCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHH
Q 002203 566 ---FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (954)
Q Consensus 566 ---farvsP--~qK~~iV~~lq~~----g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~a 636 (954)
+-.++| -.|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..+..||++....+=..+.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 223344 4788888888753 3568899999999999999999999999999999999999987665666655
Q ss_pred H
Q 002203 637 V 637 (954)
Q Consensus 637 i 637 (954)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 3
No 58
>PLN02887 hydrolase family protein
Probab=98.37 E-value=2e-06 Score=102.61 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=48.0
Q ss_pred EEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHH
Q 002203 587 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (954)
Q Consensus 587 ~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~ 638 (954)
-|+++|||.||.+||+.|+.||||++|.+.+|++||+|..+++=..+..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998878778887774
No 59
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.37 E-value=1.1e-06 Score=91.38 Aligned_cols=117 Identities=26% Similarity=0.368 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +........ ..... -+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~--~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE--KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC--CCeEe----------cceeeEEccc
Confidence 5799999999999999999999999999999999999997431 111111000 00000 0112234567
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccC
Q 002203 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (954)
Q Consensus 573 qK~~iV~~lq~~----g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aAD 622 (954)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788787776554 24589999999999999999999999765555666666
No 60
>PRK08238 hypothetical protein; Validated
Probab=98.35 E-value=8.7e-05 Score=87.21 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=74.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997322 111110 1135677
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA 617 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A 617 (954)
.|.+.++.....+ -+.++||..||.|+++.|+-.++++.+...+
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 7766554322222 2578999999999999999999998554443
No 61
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.34 E-value=2.4e-06 Score=93.48 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=54.5
Q ss_pred hHHHHHHHHhhC-C---CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHH
Q 002203 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (954)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~ 638 (954)
.|..-++.+.++ | .-|+++||+.||.+|++.|++|++|+++.+..+++||+|..+++-..+..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466555555433 3 35899999999999999999999999998989999999998888888888774
No 62
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.29 E-value=4.6e-06 Score=88.07 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=86.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc-CcccccccCcccHHHHhhhcceE--Ee
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-GQDKDASIAALPVDELIEKADGF--AG 568 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~-g~~~~~~~~~~~~~~~~~~~~vf--ar 568 (954)
-+++||+.+.++.|++.|+++.++||........+.+.++.....+...... +.......+. ...+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 4789999999999999999999999999988888888875433322211111 1110000000 0000 00
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHH--hccCEEEcCCCchhHHHHH
Q 002203 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 569 vsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~--~aADivL~~~~~~~i~~ai 637 (954)
-....|..+++.++.....+.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 01357999999998887889999999999999999999777542111111 1122222 4577776655
No 63
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.28 E-value=3.7e-06 Score=91.33 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=53.8
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHH
Q 002203 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (954)
Q Consensus 573 qK~~iV~~lq~~----g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~a 636 (954)
.|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++.+..++.||++..+++-..+..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 587777777654 2469999999999999999999999999999999999999987766665543
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.27 E-value=1.2e-06 Score=90.31 Aligned_cols=92 Identities=24% Similarity=0.290 Sum_probs=70.8
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh-h-
Q 002203 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 573 (954)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~-q- 573 (954)
+++++.|+.++++|++++++||+....+..+++.+|+..... .+.+.. .-. +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v-----~~~~~~-~~~---------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV-----IGNELF-DNG---------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE-----EEEEEE-CTT---------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE-----EEEeee-ecc---------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211 111110 000 12245666666 4
Q ss_pred -HHHHHHHH------hhCCCEEEEECCCccCHHhhh
Q 002203 574 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (954)
Q Consensus 574 -K~~iV~~l------q~~g~~V~m~GDG~NDapALk 602 (954)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
No 65
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.23 E-value=2.7e-06 Score=84.45 Aligned_cols=109 Identities=21% Similarity=0.220 Sum_probs=76.5
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhh
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~q 573 (954)
+-|++++.++.|++.|.+|.++||--...+..+|.++||+........+.-.. +....+-... -.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-~Gk~~gfd~~--------~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-DGKYLGFDTN--------EPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc-CCcccccccC--------CccccCCc
Confidence 45899999999999999999999999999999999999975322222221000 0000000000 00012347
Q ss_pred HHHHHHHHhhC--CCEEEEECCCccCHHhhhhCCeeEEec
Q 002203 574 KYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (954)
Q Consensus 574 K~~iV~~lq~~--g~~V~m~GDG~NDapALk~AdVGIamg 611 (954)
|.++++.+++. -..++|+|||+||.+|+..||-=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999985 457899999999999999977766664
No 66
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.18 E-value=1.5e-05 Score=86.66 Aligned_cols=66 Identities=21% Similarity=0.216 Sum_probs=51.5
Q ss_pred hHHHHHHHHhhC------CCEEEEECCCccCHHhhhhCCeeEEeccch---HHHHhc---cCEEEcCCCchhHHHHHH
Q 002203 573 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA---SDIVLTEPGLSVIISAVL 638 (954)
Q Consensus 573 qK~~iV~~lq~~------g~~V~m~GDG~NDapALk~AdVGIamg~gt---d~A~~a---ADivL~~~~~~~i~~ai~ 638 (954)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. +++|...++-..+..+++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 566666655443 456999999999999999999999999887 467875 458877777777877774
No 67
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.12 E-value=2.4e-05 Score=85.76 Aligned_cols=67 Identities=21% Similarity=0.152 Sum_probs=50.6
Q ss_pred hHHHHHHHHhh-------CCCEEEEECCCccCHHhhhhCCeeEEeccch-H--H---HHhccCEEEcCCCchhHHHHHHH
Q 002203 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-D--A---ARSASDIVLTEPGLSVIISAVLT 639 (954)
Q Consensus 573 qK~~iV~~lq~-------~g~~V~m~GDG~NDapALk~AdVGIamg~gt-d--~---A~~aADivL~~~~~~~i~~ai~~ 639 (954)
.|..-++.|.+ ....|.++|||-||.+||+.|++||||+++. + . .+..+|++....+-..+.+++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 56665665544 2356899999999999999999999998444 2 1 34478999888887788877753
No 68
>PLN02954 phosphoserine phosphatase
Probab=98.09 E-value=2.7e-05 Score=82.68 Aligned_cols=131 Identities=21% Similarity=0.290 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+........+ ....+... .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECccC------CCcc--cCC
Confidence 367999999999999999999999999999999999999963 221110000000 00000000 0000 112
Q ss_pred hhHHHHHHHHhhC-C-CEEEEECCCccCHHhhhh--CCeeEEeccc--hHHHHhccCEEEcCCCchhHHH
Q 002203 572 EHKYEIVKRLQER-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 635 (954)
Q Consensus 572 ~qK~~iV~~lq~~-g-~~V~m~GDG~NDapALk~--AdVGIamg~g--td~A~~aADivL~~~~~~~i~~ 635 (954)
..|.+.++.+.++ | ..+.|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 4477777777654 2 468899999999999777 5776666532 2333456899984 4555544
No 69
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.09 E-value=8.4e-06 Score=78.58 Aligned_cols=114 Identities=24% Similarity=0.419 Sum_probs=88.2
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHH
Q 002203 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (954)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~ 579 (954)
-.|+.++++||+|-+|||.+......-|+++||..- |-. -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------YQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------eec--hHhHHHHHH
Confidence 478999999999999999999999999999998521 111 256776666
Q ss_pred HHhhC----CCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCC----chhHHHHHHHhHHHHH
Q 002203 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQ 645 (954)
Q Consensus 580 ~lq~~----g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~----~~~i~~ai~~gR~~~~ 645 (954)
.|.++ -.-|+++||..||-|+|++...++|+.++.+-.++.||+|+...+ +..+.+.|...+..++
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 66543 346999999999999999999999999999999999999987654 3344455544444333
No 70
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.02 E-value=1.7e-05 Score=81.38 Aligned_cols=113 Identities=16% Similarity=0.074 Sum_probs=75.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCccc-HHHHhhhcceEEe-c
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALP-VDELIEKADGFAG-V 569 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~~~~vfar-v 569 (954)
-++++++.+.++.|++.|+++.++|+........+.+..|+.... ...+ +.+... ++.. +.-...++.++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceE--CCCCcEEEecCCCCccCcCC
Confidence 378899999999999999999999999999999999999885321 0111 111000 0000 0000000011111 1
Q ss_pred ChhhHHHHHHHHhhC-CCEEEEECCCccCHHhhhhCCeeEE
Q 002203 570 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (954)
Q Consensus 570 sP~qK~~iV~~lq~~-g~~V~m~GDG~NDapALk~AdVGIa 609 (954)
....|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 223599999999887 8889999999999999999987544
No 71
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.01 E-value=4.3e-05 Score=83.90 Aligned_cols=66 Identities=26% Similarity=0.298 Sum_probs=50.9
Q ss_pred hHHHHHHHHhhC----C-CEEEEECCCccCHHhhhhCCeeEEeccchHHHH----hcc-CEEE--cCCCchhHHHHHH
Q 002203 573 HKYEIVKRLQER----K-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (954)
Q Consensus 573 qK~~iV~~lq~~----g-~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~----~aA-DivL--~~~~~~~i~~ai~ 638 (954)
.|..-++.+.+. . ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 566666665532 4 789999999999999999999999999999988 666 6776 3444556666663
No 72
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.93 E-value=4.5e-05 Score=80.87 Aligned_cols=133 Identities=12% Similarity=0.086 Sum_probs=83.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCC-CCCCC-cccCcccccccCcccHHHHhhhcce--EEe
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSS-SLLGQDKDASIAALPVDELIEKADG--FAG 568 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~-~l~g~~~~~~~~~~~~~~~~~~~~v--far 568 (954)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +... .+... .+.+......-+. ... +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~---------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH---------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC---------Cccccccc
Confidence 67999999999999999999999999998889888887 6431 11000 0111100000000 000 000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHH--hccCEEEcCCCchhHHHHH
Q 002203 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 569 vsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~--~aADivL~~~~~~~i~~ai 637 (954)
-....|..+++.++.....|.|+|||.||.+|.+.||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 144 ~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 00134888999888777789999999999999999999777431112222 2233333 4566666655
No 73
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.92 E-value=2e-05 Score=80.22 Aligned_cols=101 Identities=23% Similarity=0.271 Sum_probs=70.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+.. .+... +... .+....+.. ..-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~-~~~~-~~g~~~g~~--------~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANR-LEFD-DNGLLTGPI--------EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeee-EEEC-CCCEEeCcc--------CCcccCCcc
Confidence 368999999999999999999999999999999999999853 11111 1000 000000000 000124568
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCccCHHhhhhC
Q 002203 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (954)
Q Consensus 573 qK~~iV~~lq~~----g~~V~m~GDG~NDapALk~A 604 (954)
.|.++++.++++ ...+.++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999876
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.81 E-value=0.00012 Score=77.76 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=88.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecC-
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 570 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvs- 570 (954)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ...+ +.+. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~-~~~~------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVI-GGDS------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEE-cCCC------------------CCCCCc
Confidence 467899999999999999999999999999999999999985321 1111 1000 11122
Q ss_pred -hhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCe-eEEecc----chHHHHhccCEEEcCCCchhHHHHHHH
Q 002203 571 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 639 (954)
Q Consensus 571 -P~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdV-GIamg~----gtd~A~~aADivL~~~~~~~i~~ai~~ 639 (954)
|+--..+.+.++.....+.|+||+.||+.|.+.|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 222234455555555679999999999999999999 666642 2344455788888 678888877654
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.79 E-value=5.7e-05 Score=78.79 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=77.1
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecC
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvs 570 (954)
..++++++.+.|+.+++.|+++.++||-....+..+++.+|+..- ......... +....+.. . --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~~--------~-~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGNI--------D-GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCCc--------c-CCCCC
Confidence 356899999999999999999999999999999999999998531 111111000 00000000 0 01234
Q ss_pred hhhHHHHHHHHhh-CCC---EEEEECCCccCHHhhhhCCeeEEec
Q 002203 571 PEHKYEIVKRLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVA 611 (954)
Q Consensus 571 P~qK~~iV~~lq~-~g~---~V~m~GDG~NDapALk~AdVGIamg 611 (954)
++.|.+.++.+.+ .+. .+.++||+.||.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6788888877654 342 6889999999999999999999886
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.68 E-value=0.0001 Score=70.49 Aligned_cols=118 Identities=15% Similarity=0.051 Sum_probs=77.3
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe
Q 002203 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (954)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 568 (954)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ....+........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhh-cccccccccccccccCC
Confidence 34568999999999999999999999999999999999999987321 0111100000000 00000000111122345
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhh-CCeeEE
Q 002203 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 609 (954)
Q Consensus 569 vsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~-AdVGIa 609 (954)
-.|+.+..+.+.+......+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56677777777776666789999999999999998 555554
No 77
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.65 E-value=0.00028 Score=74.85 Aligned_cols=126 Identities=18% Similarity=0.208 Sum_probs=91.7
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecC
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvs 570 (954)
..++-|+++++++.|+++|++..++|++....+..+.+..|+.... ..+.|.+.. -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCC----------------CCCCcC
Confidence 4567799999999999999999999999999999999999986532 111111000 011124
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCC---eeEEecc--chHHHHhccCEEEcCCCchhHHHHH
Q 002203 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~Ad---VGIamg~--gtd~A~~aADivL~~~~~~~i~~ai 637 (954)
|+....+.+.+....+.++||||..||..|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55666666666655447999999999999999998 6666663 4566777799998 5566666554
No 78
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.56 E-value=0.00038 Score=72.82 Aligned_cols=124 Identities=16% Similarity=0.143 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+++++|++.|+++.++||.....+...-+.+|+.... ...+...+. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885321 011100000 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEE-e--c--cchHHHHhccCEEEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIa-m--g--~gtd~A~~aADivL~~~~~~~i~~ai 637 (954)
-=..+++.++-....++|+||+.+|..+-++|++... + | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2234444444445679999999999999999999643 3 3 22344567899988 4555655543
No 79
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.38 E-value=0.00092 Score=72.33 Aligned_cols=147 Identities=16% Similarity=0.143 Sum_probs=93.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCC--C-CCCc-c--cCc--------------------
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y-PSSS-L--LGQ-------------------- 545 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~-~~~~-l--~g~-------------------- 545 (954)
.+..|...++++++++.|+.++..||......+.+.+++++.... + .... + .+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999988875431 0 0000 0 000
Q ss_pred -------------c-ccc-------ccCccc----H---HHHhhhc--ce---EE-----ecCh--hhHHHHHHHHhhC-
Q 002203 546 -------------D-KDA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER- 584 (954)
Q Consensus 546 -------------~-~~~-------~~~~~~----~---~~~~~~~--~v---fa-----rvsP--~qK~~iV~~lq~~- 584 (954)
. ... ....+. + .+.+.+. .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 000 000001 1 1111110 11 11 2344 4788888888664
Q ss_pred ---CCEEEEECCCccCHHhhhh-CCeeEEeccchHHHHhccC-------EEEcCCCchhHHHHHH
Q 002203 585 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (954)
Q Consensus 585 ---g~~V~m~GDG~NDapALk~-AdVGIamg~gtd~A~~aAD-------ivL~~~~~~~i~~ai~ 638 (954)
...|.++||+.||.+|++. ++.||+|+++.+..++.+| ++-....-..+.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3578999999999999998 7799999999888776443 4444444455666553
No 80
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.36 E-value=0.00071 Score=72.04 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (954)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555667999999999999999999999999999999999974
No 81
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.30 E-value=0.0012 Score=72.43 Aligned_cols=125 Identities=16% Similarity=0.160 Sum_probs=80.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... + . +.+.+.. ....-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~-~-i~~~d~~----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R-W-IIGGDTL----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e-E-EEecCCC----------------CCCCCCc
Confidence 478899999999999999999999999988888888888874321 0 0 1110000 0001111
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCe-eEEecc----chHHHHhccCEEEcCCCchhHHHHH
Q 002203 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdV-GIamg~----gtd~A~~aADivL~~~~~~~i~~ai 637 (954)
+-=..+.+.+.-....+.|+||+.||..|.++|++ .+++.. ..+.....+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11123333333234579999999999999999997 445532 2333455799988 4566666544
No 82
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.22 E-value=0.0014 Score=68.97 Aligned_cols=124 Identities=18% Similarity=0.131 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+.... .. +.+.+.. -...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~-i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DV-VITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eE-EEecCcC----------------CCCCCCcH
Confidence 36799999999999999999999999999888888999985321 11 1111000 00111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeE---Eeccc--hHHHHhccCEEEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI---AVADA--TDAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGI---amg~g--td~A~~aADivL~~~~~~~i~~ai 637 (954)
-=.++.+.+.-....+.|+||..+|..|-++|++-. .-+.. .+.....+|+++ +++..++..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 333444444444456899999999999999999843 22311 223445688887 4677766654
No 83
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.19 E-value=0.00042 Score=74.31 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=54.8
Q ss_pred hhHHHHHHHHhhC-C---CEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccC----EEEcCCCchhHHHHHH
Q 002203 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 638 (954)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aAD----ivL~~~~~~~i~~ai~ 638 (954)
..|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=..+.+++.
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3788888888654 3 2588999999999999999999999999999999999 7765555566777764
No 84
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.09 E-value=0.0017 Score=68.22 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=77.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh-
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP- 571 (954)
++.||+.++++.|++.|+++.++|+-....+..+.++.|+.... + .+.+.+. ..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S--VLIGGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c--EEEecCC------------------CCCCCCC
Confidence 57899999999999999999999999988999999999985321 1 1111100 011122
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe-ccc----hHHHHhccCEEEcCCCchhHH
Q 002203 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA----TDAARSASDIVLTEPGLSVII 634 (954)
Q Consensus 572 -~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam-g~g----td~A~~aADivL~~~~~~~i~ 634 (954)
+-=..+.+.+.-....++|+||..||..|.++|++-... ..| .+.....+|+++ +++..+.
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 211233333333345699999999999999999987543 221 123334688887 4455544
No 85
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.08 E-value=0.0033 Score=66.53 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.5
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002203 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (954)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (954)
+.+.++|++|+++|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
No 86
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=96.94 E-value=0.0025 Score=69.63 Aligned_cols=132 Identities=11% Similarity=0.109 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHh-CCCEEEEEccCChHHHHHHHHHhCCC---CC---CC--CCC----ccc----------------
Q 002203 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG---TN---MY--PSS----SLL---------------- 543 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~---~~---~~--~~~----~l~---------------- 543 (954)
.+-+++.++|++|++ .|+.++++||..........+.+++. .+ .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999888887766641 01 00 000 000
Q ss_pred ---Ccccc----------cccC--cccHHHHh----hhcc--------eEEecChh--hHHHHHHHHhhC----CCEEEE
Q 002203 544 ---GQDKD----------ASIA--ALPVDELI----EKAD--------GFAGVFPE--HKYEIVKRLQER----KHICGM 590 (954)
Q Consensus 544 ---g~~~~----------~~~~--~~~~~~~~----~~~~--------vfarvsP~--qK~~iV~~lq~~----g~~V~m 590 (954)
|...+ ..++ .+.+.++. +... .+-.+.|. +|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0000 01111111 1111 12233443 788888776554 356889
Q ss_pred ECCCccCHHhhhhC----CeeEEeccchHHHHhccCEEEcCC
Q 002203 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEP 628 (954)
Q Consensus 591 ~GDG~NDapALk~A----dVGIamg~gtd~A~~aADivL~~~ 628 (954)
+||+.||.+|++.+ +.||+||++. ..|++.|.++
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~~ 233 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAGV 233 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCCH
Confidence 99999999999999 9999999765 4577877543
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.92 E-value=0.01 Score=64.53 Aligned_cols=132 Identities=11% Similarity=0.078 Sum_probs=83.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe---
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar--- 568 (954)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... .+........-++ +...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~dG-----------vltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDEDG-----------VLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCCC-----------eEeCCCC
Confidence 4679999999999999999999999999999999999999853211 1100000000000 0101
Q ss_pred --cChhhHHHHHHH-----Hh--hCCCEEEEECCCccCHHhhhhC---CeeEEec--c-c----hHHHHhccCEEEcCCC
Q 002203 569 --VFPEHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPG 629 (954)
Q Consensus 569 --vsP~qK~~iV~~-----lq--~~g~~V~m~GDG~NDapALk~A---dVGIamg--~-g----td~A~~aADivL~~~~ 629 (954)
+....|.+.+.. ++ .....|.|+|||.||++|-.-. +-=|.+| + - -+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011346554432 22 1235688999999999996644 2233343 2 1 3345689999999997
Q ss_pred chhHHHHH
Q 002203 630 LSVIISAV 637 (954)
Q Consensus 630 ~~~i~~ai 637 (954)
=-.++.+|
T Consensus 266 t~~v~~~i 273 (277)
T TIGR01544 266 TLEVANSI 273 (277)
T ss_pred CchHHHHH
Confidence 66666665
No 88
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.85 E-value=0.0041 Score=65.96 Aligned_cols=119 Identities=14% Similarity=0.165 Sum_probs=76.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
-+|.||+.++++.|++.|+++.++|+........+.+++|+.... ...+.+... ...+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 367899999999999999999999999999899999999985432 111111000 0111122
Q ss_pred hhHHHHHHHHhhCC---CEEEEECCCccCHHhhhhCCeeEEe-ccc---hHHHHhccCEEEcCCCchhHH
Q 002203 572 EHKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 634 (954)
Q Consensus 572 ~qK~~iV~~lq~~g---~~V~m~GDG~NDapALk~AdVGIam-g~g---td~A~~aADivL~~~~~~~i~ 634 (954)
+ -+-+.+++.| +.+.|+||..||+.|-++|++.... ..+ .+.-...+|+++ .+|..+.
T Consensus 152 ~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 E---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred H---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 2 2233333333 4589999999999999999987554 322 222223577776 3454443
No 89
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.82 E-value=0.0054 Score=64.80 Aligned_cols=122 Identities=18% Similarity=0.179 Sum_probs=78.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcccHHHHhhhcceEEecC
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvs 570 (954)
.++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +.. ...+...+. .+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~-------------------~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDV-------------------AAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcC-------------------CCCC
Confidence 4789999999999999999999999999999999999999851 111 111111110 0112
Q ss_pred h--hhHHHHHHHHhhC-CCEEEEECCCccCHHhhhhCCeeE--Eeccch----HHHHhccCEEEcCCCchhHHH
Q 002203 571 P--EHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 635 (954)
Q Consensus 571 P--~qK~~iV~~lq~~-g~~V~m~GDG~NDapALk~AdVGI--amg~gt----d~A~~aADivL~~~~~~~i~~ 635 (954)
| +-=....+.+.-. ...+.|+||+.+|..|-++|++.. ++..|. +.....+|.++ +++..+..
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 3 2112222333222 256999999999999999999986 343321 12234577777 44555544
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.79 E-value=0.0054 Score=65.43 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 56899999999999999999999999988888888888875321 111111000 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeE-Eeccc----h-HHHHhccCEEEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADA----T-DAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGI-amg~g----t-d~A~~aADivL~~~~~~~i~~ai 637 (954)
-=..+.+.+.-....+.|+||+.||..|-++|++-. ++..| . ......+|+++ +++..+....
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 333455555544567999999999999999999874 33221 1 12334689988 4555555433
No 91
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.76 E-value=0.0091 Score=65.46 Aligned_cols=118 Identities=11% Similarity=0.095 Sum_probs=79.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... . ..+.+ ...+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~-----------------------~~~~~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAG-----------------------TPILS 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEec-----------------------CCCCC
Confidence 56799999999999999999999999999999999999985421 0 11111 00001
Q ss_pred hHHHHHHHHhh---CCCEEEEECCCccCHHhhhhCCeeEEe-ccc--h--HHHHhccCEEEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIAV-ADA--T--DAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~---~g~~V~m~GDG~NDapALk~AdVGIam-g~g--t--d~A~~aADivL~~~~~~~i~~ai 637 (954)
.+.-+.+.+++ ....++|+||+.+|..|-++|++-... ..| + +.....+|+++ +++..+...+
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11222223332 345699999999999999999986432 222 2 23344689988 5677776654
No 92
>PRK11590 hypothetical protein; Provisional
Probab=96.60 E-value=0.0094 Score=62.77 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=74.6
Q ss_pred CCCccHHHHH-HHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 493 ~lr~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+.+.+....+. . .-..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 57888999999999999999999999999621 0111122111100000 0 0123567
Q ss_pred hhHHHHHHHH-hhCCCEEEEECCCccCHHhhhhCCeeEEecc
Q 002203 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (954)
Q Consensus 572 ~qK~~iV~~l-q~~g~~V~m~GDG~NDapALk~AdVGIamg~ 612 (954)
++|.+-++.. .......-+-||..||.|||+.|+-.+++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8898877754 3334455688999999999999999999974
No 93
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.48 E-value=0.012 Score=70.87 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=39.6
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002203 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (954)
Q Consensus 486 Gli~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (954)
|.+.-.|. .-+.+.++|++|+++|+.+++.||....-...+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44444333 3357899999999999999999999999999999999974
No 94
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.46 E-value=0.019 Score=62.76 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=62.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..... ..+.+.+. ..+..|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDD------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCc------------------CCCCCC-
Confidence 467899999999999999999999999888777777777643211 11111110 001122
Q ss_pred hHHHHHHHHhhCC----CEEEEECCCccCHHhhhhCCe
Q 002203 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI 606 (954)
Q Consensus 573 qK~~iV~~lq~~g----~~V~m~GDG~NDapALk~AdV 606 (954)
+..-+.+.+++.| ..+.|+||..+|..|-+.|++
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 1223344444433 458999999999999999997
No 95
>PLN02382 probable sucrose-phosphatase
Probab=96.43 E-value=0.0046 Score=71.78 Aligned_cols=65 Identities=23% Similarity=0.222 Sum_probs=48.3
Q ss_pred hHHHHHHHHhhC----C---CEEEEECCCccCHHhhhhCC-eeEEeccchHHHHhcc--------CEEEcC-CCchhHHH
Q 002203 573 HKYEIVKRLQER----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLTE-PGLSVIIS 635 (954)
Q Consensus 573 qK~~iV~~lq~~----g---~~V~m~GDG~NDapALk~Ad-VGIamg~gtd~A~~aA--------DivL~~-~~~~~i~~ 635 (954)
.|..-++.|.++ | ..|.++||+.||.+||+.|+ .||+|+++.+..++.+ |++..+ .+-..|..
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 588888777654 2 47899999999999999999 6999999998888643 555443 23444555
Q ss_pred HH
Q 002203 636 AV 637 (954)
Q Consensus 636 ai 637 (954)
++
T Consensus 255 al 256 (413)
T PLN02382 255 AI 256 (413)
T ss_pred HH
Confidence 55
No 96
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.43 E-value=0.011 Score=62.24 Aligned_cols=106 Identities=12% Similarity=0.023 Sum_probs=73.6
Q ss_pred CCCccHHHHHH-HHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 493 ~lr~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
.++|++.++|+ .+++.|++++++|+=....+..+|+..|+... ..+.+.+.+.. ++-. . .=..+.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~gg~-------~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NGGW-------V-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CCce-------E-cCccCCC
Confidence 46899999996 78889999999999999999999998655221 11112211100 0000 0 0123566
Q ss_pred hhHHHHHHHH-hhCCCEEEEECCCccCHHhhhhCCeeEEec
Q 002203 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVA 611 (954)
Q Consensus 572 ~qK~~iV~~l-q~~g~~V~m~GDG~NDapALk~AdVGIamg 611 (954)
++|.+-++.. .......-+=||..||.|||+.||-.+++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 8898877644 323345568899999999999999999996
No 97
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.41 E-value=0.028 Score=61.20 Aligned_cols=42 Identities=7% Similarity=-0.004 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 534 (954)
..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
No 98
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.38 E-value=0.0047 Score=64.16 Aligned_cols=94 Identities=18% Similarity=0.096 Sum_probs=67.0
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecC
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvs 570 (954)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+.... ...+.+.+ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4557788899999999999999999999999999999999985321 11111100 111334
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhC
Q 002203 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (954)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~A 604 (954)
|+--..+.+.+.-....+.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5544555566655556799999999999887765
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.37 E-value=0.018 Score=62.77 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=77.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ...+.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999988889985321 1111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeE-Ee-ccchHHHHhccCEEEcCCCchhH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVI 633 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGI-am-g~gtd~A~~aADivL~~~~~~~i 633 (954)
-=....+.+.-....++|+||..+|..|-++|++-. ++ +.........+|+++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 112333444434456999999999999999999843 33 322222333578877 344443
No 100
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.36 E-value=0.021 Score=61.85 Aligned_cols=94 Identities=17% Similarity=0.135 Sum_probs=64.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+..... ..++.+.+. .+-.|.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~-------------------~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDV-------------------PAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccC-------------------CCCCCC
Confidence 467899999999999999999999999999888888888754311 111111100 011221
Q ss_pred hHHHHHHHHhhCC----CEEEEECCCccCHHhhhhCCee
Q 002203 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 573 qK~~iV~~lq~~g----~~V~m~GDG~NDapALk~AdVG 607 (954)
...+.+.+++.| +.+.|+||..+|..|=+.|++-
T Consensus 159 -p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 -PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223334444333 4589999999999999999974
No 101
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.17 E-value=0.015 Score=60.77 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhC
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 531 (954)
++.+++.+++++|++.|+++.++||........+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999988888754
No 102
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.12 E-value=0.018 Score=68.16 Aligned_cols=123 Identities=11% Similarity=0.090 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 67899999999999999999999999999999999999985321 1111111100 011232
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCe-eEEecc--chHHHHhccCEEEcCCCchhHHHHHHH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 639 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdV-GIamg~--gtd~A~~aADivL~~~~~~~i~~ai~~ 639 (954)
-=....+.++ -..+.|+||..+|+.|-+.|++ .|++.. +.+.....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222222 2469999999999999999997 445532 2222234588887 567777666543
No 103
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.08 E-value=0.037 Score=59.83 Aligned_cols=117 Identities=12% Similarity=0.125 Sum_probs=77.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.++++.|++.|+++.++|+-....+...-+++|+.... ...+.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985421 1111111100 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEE-eccc---hHHHHhccCEEEcCC
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLTEP 628 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIa-mg~g---td~A~~aADivL~~~ 628 (954)
-=..+.+.+.-....+.|+||..+|..|=++|++-.. +..| .+.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 3334444454445668999999999999999988533 3222 222234688888543
No 104
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.03 E-value=0.044 Score=56.27 Aligned_cols=141 Identities=19% Similarity=0.248 Sum_probs=93.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCccccc-ccCcc---------------cHH
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA-SIAAL---------------PVD 557 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~-~~~~~---------------~~~ 557 (954)
+-||+.++.+.|++. ...+++|---..-+..+|..+|++-.......+ +.++ ..+.+ +-+
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~---~lD~~~~PeeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEV---DLDSIAVPEEEREELLSIIDVIASLSGE 159 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccc---cCccccCChHHHHHHHHhcCccccccHH
Confidence 458999999988876 556677777778889999999985322111111 0110 01111 111
Q ss_pred HHhhhc-ceEEecChhhHHHHHHHHhh---------------C---CCEEEEECCCccCHHhhhhCC--eeEEec-cchH
Q 002203 558 ELIEKA-DGFAGVFPEHKYEIVKRLQE---------------R---KHICGMTGDGVNDAPALKKAD--IGIAVA-DATD 615 (954)
Q Consensus 558 ~~~~~~-~vfarvsP~qK~~iV~~lq~---------------~---g~~V~m~GDG~NDapALk~Ad--VGIamg-~gtd 615 (954)
++.++. .+|.|..|..-.+|+...+. . ....+.+||.+.|+.||+.+. =|+|++ +|.+
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222222 25888888765555544443 2 344688999999999999875 258887 8888
Q ss_pred HHHhccCEEEcCCCchhHHHHHH
Q 002203 616 AARSASDIVLTEPGLSVIISAVL 638 (954)
Q Consensus 616 ~A~~aADivL~~~~~~~i~~ai~ 638 (954)
-|..-||+.+..++.......|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 88889999999999888887775
No 105
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.01 E-value=0.053 Score=67.95 Aligned_cols=163 Identities=20% Similarity=0.210 Sum_probs=95.2
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEec--cCCCCCccHHHHHHHHHh-CCCEEEEEccCChHHHHH
Q 002203 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP--LFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKE 525 (954)
Q Consensus 449 ~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~--i~D~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 525 (954)
+.....|...-.|.+++-+.. |++.... -...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344555655556777776643 3332211 112366899999999999 699999999999888777
Q ss_pred HHHHhCCC---CCC---C-CCCc---cc----------------------Ccccc---cc------cCcccH--------
Q 002203 526 TGRRLGMG---TNM---Y-PSSS---LL----------------------GQDKD---AS------IAALPV-------- 556 (954)
Q Consensus 526 ia~~lGi~---~~~---~-~~~~---l~----------------------g~~~~---~~------~~~~~~-------- 556 (954)
.....++. .+- . +... .. |...+ .. ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 65544431 000 0 0000 00 00000 00 001111
Q ss_pred HHHhhh------cce-----EEecCh--hhHHHHHHHHhhC--CCEEEEECCCccCHHhhhhC---CeeEEeccchHHHH
Q 002203 557 DELIEK------ADG-----FAGVFP--EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 618 (954)
Q Consensus 557 ~~~~~~------~~v-----farvsP--~qK~~iV~~lq~~--g~~V~m~GDG~NDapALk~A---dVGIamg~gtd~A~ 618 (954)
.+.+.. ..+ +-.+.| -+|...++.+.+. -..|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 011 123334 4799888888874 35799999999999999987 588888864 4
Q ss_pred hccCEEEcCC
Q 002203 619 SASDIVLTEP 628 (954)
Q Consensus 619 ~aADivL~~~ 628 (954)
.+|++.|.+.
T Consensus 704 s~A~~~l~~~ 713 (726)
T PRK14501 704 SRARYRLPSQ 713 (726)
T ss_pred CcceEeCCCH
Confidence 6888998654
No 106
>PRK11587 putative phosphatase; Provisional
Probab=95.93 E-value=0.034 Score=58.76 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=71.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. . ...+.+.+. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 568999999999999999999999988776666556666631 1 111111000 00111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCee-EEeccch-HHHHhccCEEEcC
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLTE 627 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG-Iamg~gt-d~A~~aADivL~~ 627 (954)
-=....+.+.-....+.|+||..+|+.|-+.|++- |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 22233333333346799999999999999999984 5564332 2233457887643
No 107
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.90 E-value=0.015 Score=62.25 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=61.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC----ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 568 (954)
.|.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..+.+.+.. ..
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQ 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CC
Confidence 34455999999999999999999997 667899999999995321 111111110 00
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 569 vsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
-.| +|. ..+++.| ++.|+||..||..+-++|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 012 232 3445555 478999999999999999864
No 108
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.87 E-value=0.024 Score=59.84 Aligned_cols=97 Identities=16% Similarity=0.140 Sum_probs=64.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.++++.|++.|+++.++|+-+...+...-+++|+.... ...+.+.+ ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998887778778888874321 11111100 1112232
Q ss_pred hHHHHHHHHhhC---CCEEEEECCCc-cCHHhhhhCCe-eEEec
Q 002203 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (954)
Q Consensus 573 qK~~iV~~lq~~---g~~V~m~GDG~-NDapALk~AdV-GIamg 611 (954)
.. -+-+.+++. ...+.|+||.. +|..+-++|++ .|.+.
T Consensus 153 ~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 21 222333333 35689999998 99999999987 44554
No 109
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.87 E-value=0.018 Score=57.45 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=68.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
.++|+-++.++.+++.++.++++|+--.-....+-.+++=-..++......... .......-.++-. .....--
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~---~ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND---YIHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---eEcCCCceeeecC---CccccCC
Confidence 468999999999999999999999876655555555544111111111110000 0000000000000 1123346
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEE
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIa 609 (954)
+|...|+.+++..+.+-|+|||+.|..|-|.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988777666553
No 110
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.77 E-value=0.025 Score=60.50 Aligned_cols=87 Identities=23% Similarity=0.288 Sum_probs=62.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC----ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 568 (954)
.|.+++.+.++.+++.|+++.++||. ...|+..+.+..|++...+.... ++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi------------------------l~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI------------------------FAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE------------------------EcC
Confidence 46788999999999999999999995 35689999998998422111111 111
Q ss_pred cCh--hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 569 VFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 569 vsP--~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
-++ .+|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 111 34544 344444 488999999999999999874
No 111
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.65 E-value=0.031 Score=62.16 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=76.1
Q ss_pred cCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEec
Q 002203 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarv 569 (954)
..+++.+++.+++++|++.|+++.++||.....+..+.+.+|+....+ ..+.+.+. ....+... .--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccC-CCCCC
Confidence 568999999999999999999999999999999999999998853111 11111110 00000000 01234
Q ss_pred ChhhHHHHHHHHhh-CCCEEEEECCCccCHHhhhhCCeeE
Q 002203 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (954)
Q Consensus 570 sP~qK~~iV~~lq~-~g~~V~m~GDG~NDapALk~AdVGI 608 (954)
.|+-|....+.+-. .-..+.|+||..||+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46677777766543 3368999999999999999999874
No 112
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.52 E-value=0.078 Score=54.29 Aligned_cols=127 Identities=20% Similarity=0.104 Sum_probs=69.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChH---------------HHHHHHHHhCCCCCCCCCCcccCcccccccCcccHH
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (954)
.+.||+.+++++|++.|+++.++|..... ....+-++.|+.-. ..+..... ..++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCC----CCCC--
Confidence 35799999999999999999999987621 01112223444100 00000000 0000
Q ss_pred HHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEE-eccchH---HHHhcc--CEEEcCCCch
Q 002203 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADATD---AARSAS--DIVLTEPGLS 631 (954)
Q Consensus 558 ~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIa-mg~gtd---~A~~aA--DivL~~~~~~ 631 (954)
.....-.|+--..+.+.+.-..+.+.|+||..+|+.+-++|++-.- +..|.. .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 0011122333334444444445679999999999999999997432 223321 112234 7776 4566
Q ss_pred hHHHHH
Q 002203 632 VIISAV 637 (954)
Q Consensus 632 ~i~~ai 637 (954)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666554
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.40 E-value=0.045 Score=56.78 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=63.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+++++|++.|+++.++|+-+......+.+++|+.... ...+...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 56899999999999999999999998888888888888974321 11111100 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 573 qK--~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
.. ..+.+.+.-.-..+.|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11 223333333345689999999999999988875
No 114
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.27 E-value=0.062 Score=59.42 Aligned_cols=116 Identities=19% Similarity=0.129 Sum_probs=69.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC-CcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
++.||+.+.++.|++.|+++.++|+-.......+-+..+... .... ..+.+.+. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 578999999999999999999999987776665544443211 0000 01100000 0011112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe-ccch--HHHHhccCEEEc
Q 002203 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADAT--DAARSASDIVLT 626 (954)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam-g~gt--d~A~~aADivL~ 626 (954)
+-=..+.+.+.-....+.|+||+.+|..|-++|++.... ..|. .-....+|+++.
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 222333444443445699999999999999999987554 2322 111235788873
No 115
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.15 E-value=0.021 Score=57.10 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=66.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
.++.|++.+.+++|++.|++++++|+-.........+++|+... ....+...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 46789999999999999999999999999999999999998621 11111111100 001111
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
+-=..+.+.+.-....+.|+||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 222344444444456799999999999999998764
No 116
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.11 E-value=0.034 Score=56.77 Aligned_cols=91 Identities=9% Similarity=0.038 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ...+.+.+ ..+..|.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhh-------------------cCCCCCC
Confidence 5779999999999999999999997532 45567777774321 11111100 1111222
Q ss_pred hHHHHHHHHhhC---CCEEEEECCCccCHHhhhhCCee
Q 002203 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 573 qK~~iV~~lq~~---g~~V~m~GDG~NDapALk~AdVG 607 (954)
..-+-+.+++. ...+.|+||..+|+.+-++|++-
T Consensus 144 -p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 -PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 11222333333 34588999999999999999874
No 117
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.10 E-value=0.075 Score=51.22 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=61.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCC--------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhc
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 563 (954)
-++.|++.++++.|+++|+++.++|+.. .....+..+++|+..... ...+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL---YACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE---EECC-C-----------------
Confidence 3678999999999999999999999988 667777888888742100 0000 0
Q ss_pred ceEEecChhhHHHHHHHHh-hCCCEEEEECC-CccCHHhhhhCCe
Q 002203 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADI 606 (954)
Q Consensus 564 ~vfarvsP~qK~~iV~~lq-~~g~~V~m~GD-G~NDapALk~AdV 606 (954)
+.+-.|+-=..+.+.++ -....++|+|| -.+|..+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111222123344442 33467999999 5899999998875
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.81 E-value=0.072 Score=56.18 Aligned_cols=119 Identities=12% Similarity=0.099 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+.++.|++. +++.++|+-....+..+-+++|+.... ...+...+. ....|.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-------------------CCCCCC
Confidence 5689999999999999 999999998888888888888885321 111111000 011232
Q ss_pred hH--HHHHHHH-hhCCCEEEEECCCc-cCHHhhhhCCe-eEEecc--chHHHHhccCEEEcCCCchhHHH
Q 002203 573 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIIS 635 (954)
Q Consensus 573 qK--~~iV~~l-q~~g~~V~m~GDG~-NDapALk~AdV-GIamg~--gtd~A~~aADivL~~~~~~~i~~ 635 (954)
.. ....+.+ .-.-..+.|+||.. +|+.+=+++++ +|.+.. .+......+|.++ ++++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 21 2333333 22234689999998 89999999997 344432 2212223466666 34554443
No 119
>PRK06769 hypothetical protein; Validated
Probab=94.67 E-value=0.091 Score=53.47 Aligned_cols=99 Identities=9% Similarity=0.001 Sum_probs=58.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChH--------HHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcce
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v 565 (954)
+-||+++++++|++.|+++.++|+.... .....-+..|+..-.. .....+.+. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC-----------------C
Confidence 6799999999999999999999987531 1222233445432100 000000000 0
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 566 farvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
..+-.|+-=.++.+.+.-.-+.+.|+||..+|..|=++|++-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 111122222344444443345699999999999999999986543
No 120
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.63 E-value=0.1 Score=53.02 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=60.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ...+.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557874311 111111000 01111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCe
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdV 606 (954)
-=..+.+.+.-....+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2233344444345678999999999999888876
No 121
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.61 E-value=0.089 Score=56.84 Aligned_cols=45 Identities=29% Similarity=0.347 Sum_probs=36.0
Q ss_pred hhHHHHHHHHhhC-C---CEEEEECCCccCHHhhhhCCeeEEeccchHH
Q 002203 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 616 (954)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~m~GDG~NDapALk~AdVGIamg~gtd~ 616 (954)
..|...|+.|+++ + +.|.++||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4799999998876 2 3466789999999999999999999987766
No 122
>PTZ00174 phosphomannomutase; Provisional
Probab=94.61 E-value=0.027 Score=60.82 Aligned_cols=54 Identities=22% Similarity=0.289 Sum_probs=47.0
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CccCHHhhhhC-CeeEEeccchHHHHhccCEEE
Q 002203 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 625 (954)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~m~GD----G~NDapALk~A-dVGIamg~gtd~A~~aADivL 625 (954)
-+|..-++.|.+...-|+++|| |-||.+||+.| -.|++++++++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4799999999887788999999 99999999987 789999999999998776553
No 123
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=94.52 E-value=0.082 Score=56.20 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=64.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh-
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP- 571 (954)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+.... ...+.+.+ +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888877777777774321 11111100 111122
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCee--EEecc
Q 002203 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVAD 612 (954)
Q Consensus 572 -~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG--Iamg~ 612 (954)
+-=..+.+.+.-....+.|+||..+|+.+-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111122233332345699999999999999999995 45543
No 124
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.52 E-value=0.16 Score=58.06 Aligned_cols=118 Identities=16% Similarity=0.135 Sum_probs=78.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh-
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP- 571 (954)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||.... ...+.+.+ +.+-.|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sdd-------------------v~~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAED-------------------VYRGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCc-------------------CCCCCCC
Confidence 46799999999999999999999999999999999999985321 11111110 011122
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe-ccchHHH-HhccCEEEcCCCchhH
Q 002203 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADATDAA-RSASDIVLTEPGLSVI 633 (954)
Q Consensus 572 -~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam-g~gtd~A-~~aADivL~~~~~~~i 633 (954)
+-=....+.+.-....++|+||..+|+.|-+.|++-... ..+.+.. ...+|+++ +++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 222334444444466799999999999999999985433 3332222 23588887 445443
No 125
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.40 E-value=0.24 Score=49.62 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=65.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH---HHHHHh---C--CCCCCCCCCcccCcccccccCcccHHHHhhh
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 562 (954)
+|...++++++++++++.|+++..+||.....+. ....++ | ++. ...+. .. +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~-~~------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLL-SP------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEE-cC------Ccchhh-hhc
Confidence 4678899999999999999999999999987774 344442 2 321 01110 00 000000 000
Q ss_pred cceEEecCh-hhHHHHHHHHhh-----CCCEEEEECCCccCHHhhhhCCe
Q 002203 563 ADGFAGVFP-EHKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADI 606 (954)
Q Consensus 563 ~~vfarvsP-~qK~~iV~~lq~-----~g~~V~m~GDG~NDapALk~AdV 606 (954)
.+. .-.| +.|.+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 2224 348888888876 45788889999999999988765
No 126
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.38 E-value=0.11 Score=52.86 Aligned_cols=110 Identities=6% Similarity=-0.046 Sum_probs=69.0
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccC-ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhc
Q 002203 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (954)
Q Consensus 485 lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 563 (954)
.....-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+..... -..+....+ .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-e
Confidence 3334444577899999999999999999999965 8888888888888741000 000000000 0
Q ss_pred ceEEecChhhH--HHHHHHHhhC------CCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 564 DGFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 564 ~vfarvsP~qK--~~iV~~lq~~------g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
.+.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 2344544432 35699999999999999999886654
No 127
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.29 E-value=0.07 Score=54.44 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=59.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
-++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+.... ...+ +.+. ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~-~~~~------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIV-DADE------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEee-ehhh------------------CCCCCC
Confidence 367899999999999999999999986 5566677778874311 1111 1000 011122
Q ss_pred hhH--HHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 572 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 572 ~qK--~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
... ..+.+.+.-....+.|+||..+|+.+-++|++-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 211 122222222235688999999999999999874
No 128
>PLN02940 riboflavin kinase
Probab=94.07 E-value=0.15 Score=58.90 Aligned_cols=112 Identities=19% Similarity=0.164 Sum_probs=69.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH-HhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
++.||+.+.++.|++.|+++.++|+-....+...-. ..|+.... ...+.+.+ +.+..|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~-------------------v~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDE-------------------VEKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhh-------------------cCCCCC
Confidence 467999999999999999999999998777766544 56764311 01111000 111122
Q ss_pred --hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEE-eccc--hHHHHhccCEEE
Q 002203 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARSASDIVL 625 (954)
Q Consensus 572 --~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIa-mg~g--td~A~~aADivL 625 (954)
+-=..+.+.+.-..+.+.|+||..+|+.|-++|++... +..+ .+.....+|.++
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 22223333333335679999999999999999998743 3332 222333466655
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=93.99 E-value=0.17 Score=53.52 Aligned_cols=120 Identities=15% Similarity=0.123 Sum_probs=72.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.++++.|+ .|+++.++|......+...-++.|+.... ...+.+.+ .....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-------------------~~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQ-------------------VGVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECc-------------------cCCCCCC
Confidence 46799999999999 68999999998888777777778874311 01111100 0001222
Q ss_pred hHHHHHHHHhhCC----CEEEEECCCc-cCHHhhhhCCee-EEec-cchH-HHHhccCEEEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQERK----HICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~~g----~~V~m~GDG~-NDapALk~AdVG-Iamg-~gtd-~A~~aADivL~~~~~~~i~~ai 637 (954)
..-+-+.+++.| ..+.|+||.. +|+.+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 -p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 -VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred -HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 122223333332 4699999998 799999999985 4444 2221 1112467777 4566665543
No 130
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=93.35 E-value=0.54 Score=46.71 Aligned_cols=109 Identities=15% Similarity=0.165 Sum_probs=75.5
Q ss_pred HHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002203 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (954)
Q Consensus 451 ~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 530 (954)
..+.+..+|+|.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|.-+..-+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998875543 333221 1234578888899999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEec-ChhhHHHHHHHHhhC---CCEEEEECCCc-cCHHhhhhCC
Q 002203 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-FPEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKAD 605 (954)
Q Consensus 531 Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarv-sP~qK~~iV~~lq~~---g~~V~m~GDG~-NDapALk~Ad 605 (954)
|++- ..|. .|-- ..+-+++++. -+-|+|+||-. .|+-+=+.|+
T Consensus 84 ~v~f-------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 84 GVPF-------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CCce-------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 9842 1111 1222 2455666655 46799999985 5776655554
Q ss_pred e
Q 002203 606 I 606 (954)
Q Consensus 606 V 606 (954)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 4
No 131
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.05 E-value=0.22 Score=49.20 Aligned_cols=97 Identities=19% Similarity=0.141 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCCh---------------HHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHH
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (954)
++.||+.++++.|++.|+++.++|..+. .....+.+.+|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4689999999999999999999998662 34455667777742100000 0000000
Q ss_pred HHhhhcceEEecChhhH--HHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 558 ELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 558 ~~~~~~~vfarvsP~qK--~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
...+ .|+-+ ..+.+.+.-.-+.+.|+||...|..+-+.|++-
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0000 22211 122222222335699999999999999888764
No 132
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.01 E-value=0.46 Score=48.36 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCC
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQ 519 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~ 519 (954)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 56899999999999999999999765
No 133
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.48 E-value=0.29 Score=50.86 Aligned_cols=91 Identities=13% Similarity=0.102 Sum_probs=56.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ...+...+ +....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~-------------------~~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYE-------------------VGAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecc-------------------cCCCCCC
Confidence 56799999999999999999999975543 45666777764211 00110000 0001121
Q ss_pred hHHHHHHHHhh---CCCEEEEECCCc-cCHHhhhhCCe
Q 002203 573 HKYEIVKRLQE---RKHICGMTGDGV-NDAPALKKADI 606 (954)
Q Consensus 573 qK~~iV~~lq~---~g~~V~m~GDG~-NDapALk~AdV 606 (954)
..-+-+.+++ ....+.|+||.. +|+.+=++|++
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 -PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred -HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 1122223333 345799999997 89998888865
No 134
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=92.40 E-value=0.32 Score=49.37 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=69.6
Q ss_pred HHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCC-hHHHHHHHHHhCCC
Q 002203 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMG 533 (954)
Q Consensus 455 ~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 533 (954)
+.+.|.+.+.+-... ++. ..=...+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~--~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLV--YPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccc--cCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788888776532 111 00123578999999999999999999999987 56677777777763
Q ss_pred CCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhh---CCCEEEEECCCc-cCHHhhhhCCee
Q 002203 534 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGV-NDAPALKKADIG 607 (954)
Q Consensus 534 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~---~g~~V~m~GDG~-NDapALk~AdVG 607 (954)
.. +....|... .+-..+++ ....++|+||.. .|..+=+.|++-
T Consensus 85 ~~------------------------------~~~~KP~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL------------------------------PHAVKPPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE------------------------------cCCCCCChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 000112111 22222332 344599999998 799999999884
No 135
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=92.39 E-value=0.17 Score=50.02 Aligned_cols=91 Identities=22% Similarity=0.260 Sum_probs=55.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
+..+|+.+.++.|++.|+++.++|+-....+...-+.. +... . . .+.+.+ ++...-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~-~i~~~~-----------------~~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-D-LILGSD-----------------EFGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-c-EEEecC-----------------CCCCCcCHH
Confidence 34479999999999999999999999888887777664 3221 1 0 111100 001111121
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCC
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~Ad 605 (954)
-=..+.+.+.-.. .++|+||..+|..|-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 1122222232223 6899999999998887763
No 136
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.38 E-value=0.44 Score=50.82 Aligned_cols=102 Identities=22% Similarity=0.274 Sum_probs=67.0
Q ss_pred CCCccHHHHHHHH--HhCCCEEEEEccCChHHHHHHHHHhCCCCC---CCCCCcccCcccccccCcccHHHHhhhcceEE
Q 002203 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTN---MYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (954)
Q Consensus 493 ~lr~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~---~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 567 (954)
|+.|+.++.++.+ ++.|+.+.++|.-|..--..+=+.-|+... ++........ +..+ .+... ..+.|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~--~G~l---~v~py--h~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA--DGRL---RVRPY--HSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC--CceE---EEeCc--cCCCCC
Confidence 6678999999999 568999999999998887888888887532 1111111000 0000 00000 012355
Q ss_pred ecCh-hhHHHHHHHHhhC----C---CEEEEECCCccCH-Hhh
Q 002203 568 GVFP-EHKYEIVKRLQER----K---HICGMTGDGVNDA-PAL 601 (954)
Q Consensus 568 rvsP-~qK~~iV~~lq~~----g---~~V~m~GDG~NDa-pAL 601 (954)
++.| .=|..+++.+++. | ..|.++|||.||- |++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 6655 4899999988865 4 6899999999995 444
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.61 E-value=0.88 Score=49.57 Aligned_cols=86 Identities=14% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEE
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 567 (954)
..++-|++.+.++.+++.|+++.++|+-.... ....-++.|+.... .+ .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EE-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cc-----------------------eEEe
Confidence 35577999999999999999999999976433 33444567775311 01 1222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCccCHHhh
Q 002203 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (954)
Q Consensus 568 rvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapAL 601 (954)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2222345566666666667899999999998654
No 138
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.57 E-value=0.47 Score=53.82 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=57.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccC---------------ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccH
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 556 (954)
-+|.|++.++++.|+++|+++.++|+= ....+..+.+..|+.-+ ..+.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC----cc--
Confidence 367899999999999999999999982 12234455566665310 000000000 00
Q ss_pred HHHhhhcceEEecChhhHHHHHHHH-hh---CCCEEEEECCCccCHHhhhhCCeeE
Q 002203 557 DELIEKADGFAGVFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGI 608 (954)
Q Consensus 557 ~~~~~~~~vfarvsP~qK~~iV~~l-q~---~g~~V~m~GDG~NDapALk~AdVGI 608 (954)
...+| .|+ -.++..+ ++ ....+.|+||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00111 222 2233322 22 2367999999999999998887753
No 139
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=91.45 E-value=0.32 Score=48.95 Aligned_cols=98 Identities=12% Similarity=0.055 Sum_probs=57.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCC---------------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHH
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~---------------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (954)
++-|++.+++++|++.|+++.++|.-. ......+-+.+|+.- . ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 456899999999999999999999742 234455666667631 0 001000000 00
Q ss_pred HHhhhcceEEecChhhHHHHHHHH-hhC---CCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 558 ELIEKADGFAGVFPEHKYEIVKRL-QER---KHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 558 ~~~~~~~vfarvsP~qK~~iV~~l-q~~---g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
.... -.|. ..+++.+ ++. ...+.|+||+.+|..+-++|++-...
T Consensus 98 ------~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------NCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------CCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0000 1122 2222222 222 24589999999999999999886543
No 140
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.28 E-value=0.32 Score=52.39 Aligned_cols=65 Identities=22% Similarity=0.213 Sum_probs=46.3
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEECCCccCHHhhhhC--------CeeEEeccchHHHHhccCEEEcCCCchhHHHH
Q 002203 569 VFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (954)
Q Consensus 569 vsP~qK~~iV~~lq~~----g~~V~m~GDG~NDapALk~A--------dVGIamg~gtd~A~~aADivL~~~~~~~i~~a 636 (954)
-.+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHH
Confidence 3456788777776554 34789999999999999999 4788885342 3567899885 44455444
Q ss_pred H
Q 002203 637 V 637 (954)
Q Consensus 637 i 637 (954)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
No 141
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=90.98 E-value=0.32 Score=48.11 Aligned_cols=93 Identities=16% Similarity=0.020 Sum_probs=63.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
-++|||+.+.++.|+ .++++.+.|.-....+..+-+.+|+.... ....+.+.+ +.+.-|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d-------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDE-------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECcc-------------------ccccCC
Confidence 357999999999999 57999999999999999999988874311 111111110 111122
Q ss_pred hhHHHHHHHHhh---CCCEEEEECCCccCHHhhhhCCeeEE
Q 002203 572 EHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA 609 (954)
Q Consensus 572 ~qK~~iV~~lq~---~g~~V~m~GDG~NDapALk~AdVGIa 609 (954)
. +.+.+++ .-..|.|+||..+|..|-++|.|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 3444443 34679999999999998877755554
No 142
>PLN02811 hydrolase
Probab=90.96 E-value=0.44 Score=50.35 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=56.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHH-HHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~-ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
++.||+.+.|+.|++.|+++.++||-+...... ..+..|+..- . ...+.+.+.+ +.+..|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-f-~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-M-HHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-C-CEEEECChhh-----------------ccCCCC
Confidence 567999999999999999999999977543322 2222233210 0 0011100000 011112
Q ss_pred h--hHHHHHHHHh---hCCCEEEEECCCccCHHhhhhCCeeEE
Q 002203 572 E--HKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIA 609 (954)
Q Consensus 572 ~--qK~~iV~~lq---~~g~~V~m~GDG~NDapALk~AdVGIa 609 (954)
+ ==...++.+. -..+-+.|+||...|+.|-++|++-..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 1 1123333332 223569999999999999999998644
No 143
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=90.84 E-value=1.2 Score=47.90 Aligned_cols=94 Identities=16% Similarity=0.167 Sum_probs=59.1
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH--HHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhc
Q 002203 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (954)
Q Consensus 486 Gli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 563 (954)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. ...+++|+..+.. ...+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~-------------------- 75 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIIS-------------------- 75 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEc--------------------
Confidence 556667788999999999999999999999995544333 4557777753110 11110
Q ss_pred ceEEecChhhHHHHHHHHhh---CCCEEEEECCCccCHHhhhhCC
Q 002203 564 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 605 (954)
Q Consensus 564 ~vfarvsP~qK~~iV~~lq~---~g~~V~m~GDG~NDapALk~Ad 605 (954)
+.. ....-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 76 ---s~~--~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 76 ---SGE--IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---cHH--HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 000 001122222233 2466999999999998886543
No 144
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=89.56 E-value=1.7 Score=56.73 Aligned_cols=125 Identities=15% Similarity=0.162 Sum_probs=79.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
.+-||+.+.++.|+++|+++.++|+-....+..+-++.|+...... ..+.+.+ +.+..|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCC
Confidence 3568999999999999999999999988888888888888421111 1111110 1112222
Q ss_pred h--HHHHHHHHhhCCCEEEEECCCccCHHhhhhCCe-eEEeccc---hHHHHhccCEEEcCCCchhHHHHH
Q 002203 573 H--KYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 q--K~~iV~~lq~~g~~V~m~GDG~NDapALk~AdV-GIamg~g---td~A~~aADivL~~~~~~~i~~ai 637 (954)
. =.+..+.+.-....+.|+||..+|+.|-+.|++ -|++..+ .+.....+|+++.+..--++...+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 1 123334444345669999999999999999998 4444322 333445788888554333344443
No 145
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.11 E-value=0.78 Score=48.63 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=62.4
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhC---CCCCCCCCCcccCcccccccCcccHHHHhhhcceEE
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 567 (954)
+-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +... +. ... +..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~--------------~~f-d~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FS--------------GYF-DTTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cc--------------eEE-EeCccc
Confidence 35788999999999999999999999988776665554432 2110 00 000 000111
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 568 rvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1122222334444443345699999999999999999986544
No 146
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=88.72 E-value=2 Score=45.65 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=53.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 568 (954)
-|+-|++.+.++.+++.|++|+++||........+. ++.|...- ..+.-...+ +. ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~LiLR~~~----d~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KHLILRGLE----DS------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----CeeeecCCC----CC------------Cc
Confidence 477899999999999999999999999865422222 34565421 111111000 00 00
Q ss_pred cChhhHHHHHHHHhhCCC-EEEEECCCccCH
Q 002203 569 VFPEHKYEIVKRLQERKH-ICGMTGDGVNDA 598 (954)
Q Consensus 569 vsP~qK~~iV~~lq~~g~-~V~m~GDG~NDa 598 (954)
..-+-|.+.-+.+.+.|+ +++.+||-.+|-
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 011226677767776765 778899998885
No 147
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=88.53 E-value=1.2 Score=42.94 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=34.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC-ChHHHHHHHHHhC
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 531 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 531 (954)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666665
No 148
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=88.51 E-value=0.53 Score=49.22 Aligned_cols=97 Identities=13% Similarity=0.030 Sum_probs=54.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHH--HHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEec
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarv 569 (954)
-++.|++.+.++.|++.|+++.++|...... ........|+.... . ..+...+. ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEEEeeec-----------------CCCCC
Confidence 3678999999999999999999999875432 22222223332110 0 00000000 00111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 570 sP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
.|+-=..+.+.+.-....++|+||...|+.+=++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 12211223333333345688999999999999999884
No 149
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.77 E-value=3.2 Score=43.11 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=31.9
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002203 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (954)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (954)
.+...+.+|+++|+.|+.+|--...--...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998877777778888875
No 150
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=87.73 E-value=2.1 Score=54.41 Aligned_cols=67 Identities=7% Similarity=0.063 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHH-HhCCCEEEEEccCChHHHHHHHH
Q 002203 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGR 528 (954)
Q Consensus 450 ~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~ 528 (954)
..+..|.....|.+++-|.. |++-.....-.|-+++.+++++| ++.|+.|.++||.+..+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455555566777665543 33311111235667899999997 77899999999999888776554
Q ss_pred H
Q 002203 529 R 529 (954)
Q Consensus 529 ~ 529 (954)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
No 151
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=87.46 E-value=1.6 Score=44.09 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=31.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChH------------HHHHHHHHhCCC
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 533 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~------------tA~~ia~~lGi~ 533 (954)
+-||+.+++++|+++|+++.++|.-... ....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999975432 345566777763
No 152
>PLN02580 trehalose-phosphatase
Probab=85.54 E-value=1.5 Score=50.21 Aligned_cols=67 Identities=25% Similarity=0.230 Sum_probs=46.6
Q ss_pred EecChh---hHHHHHHHHhhC-C-----C-EEEEECCCccCHHhhhh-----CCeeEEeccchHHHHhccCEEEcCCCch
Q 002203 567 AGVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 631 (954)
Q Consensus 567 arvsP~---qK~~iV~~lq~~-g-----~-~V~m~GDG~NDapALk~-----AdVGIamg~gtd~A~~aADivL~~~~~~ 631 (954)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|++|.+. ..|++.|.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HH
Confidence 345553 898888887654 2 1 35899999999999995 6899999865542 357888754 34
Q ss_pred hHHHHH
Q 002203 632 VIISAV 637 (954)
Q Consensus 632 ~i~~ai 637 (954)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 444433
No 153
>PLN03017 trehalose-phosphatase
Probab=85.12 E-value=14 Score=42.14 Aligned_cols=34 Identities=9% Similarity=-0.017 Sum_probs=29.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 527 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 527 (954)
.+-++..++|++|. .|+.+.++||..........
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 36789999999999 78999999999998888773
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=84.63 E-value=4.2 Score=42.29 Aligned_cols=112 Identities=16% Similarity=0.224 Sum_probs=66.5
Q ss_pred CCCccHHHHHHHHHhCCC-EEEEEccCChHHHHHHHHHhCCCC---CCCCCC-cccCcccccccCcccHHHHhhhcceEE
Q 002203 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT---NMYPSS-SLLGQDKDASIAALPVDELIEKADGFA 567 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~---~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~~vfa 567 (954)
|.-|+..++|+.+++.|- .++++|--|.-.-..+-+..|+.+ .+++.. .+... ..+.-.+.. .-+-|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~---G~L~v~pyH----~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDAS---GRLLVRPYH----TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCC---CcEEeecCC----CCCccC
Confidence 567899999999999997 999999988776667777777632 010000 00000 000000000 001244
Q ss_pred ecChh-hHHHHHHHHhhCC-------CEEEEECCCccC-HHhhhhCCeeEEec
Q 002203 568 GVFPE-HKYEIVKRLQERK-------HICGMTGDGVND-APALKKADIGIAVA 611 (954)
Q Consensus 568 rvsP~-qK~~iV~~lq~~g-------~~V~m~GDG~ND-apALk~AdVGIamg 611 (954)
++-|. =|..++..++..+ ..+..+|||.|| +|.++...--+||-
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 44332 4777776666432 278899999999 47777766666663
No 155
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=84.63 E-value=2.6 Score=43.73 Aligned_cols=95 Identities=12% Similarity=0.025 Sum_probs=55.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH-HHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
++.||+.++++.|++.|+++.++|.-+.......- +..++.... ...+...+ +..-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEecc-------------------cCCCCC
Confidence 46899999999999999999999987654433221 112331100 00000000 001112
Q ss_pred h--hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeE
Q 002203 572 E--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (954)
Q Consensus 572 ~--qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGI 608 (954)
. ==..+.+.+.-...-+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1 112233333333456899999999999999998853
No 156
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=84.57 E-value=3.1 Score=42.05 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=72.2
Q ss_pred HHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC--EEEEEccC-------ChHHHHH
Q 002203 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIGKE 525 (954)
Q Consensus 455 ~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI--~v~miTGD-------~~~tA~~ 525 (954)
+.+.|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+. +|.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888775543 11 123457788999999999999987 49999985 3678899
Q ss_pred HHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhC-----CCEEEEECCCc-cCHH
Q 002203 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 599 (954)
Q Consensus 526 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~-----g~~V~m~GDG~-NDap 599 (954)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+-++|+||-. -|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 02223576666788888755 55699999964 4544
Q ss_pred hh
Q 002203 600 AL 601 (954)
Q Consensus 600 AL 601 (954)
+=
T Consensus 152 ~g 153 (168)
T PF09419_consen 152 MG 153 (168)
T ss_pred Hh
Confidence 43
No 157
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=83.76 E-value=1.9 Score=45.44 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=59.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||++++++.| ++++.++|+.....+...=+..|+.... +...+.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4999999999887777776777775321 11111111000 0001122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
-=....+.+.-....|+|+||..+|..+=++|++-...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 11222333332234589999999999999999987653
No 158
>PLN02645 phosphoglycolate phosphatase
Probab=83.01 E-value=3.1 Score=46.56 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=39.0
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH---HhCC
Q 002203 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGM 532 (954)
Q Consensus 486 Gli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~---~lGi 532 (954)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...+++ ++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 5555556777999999999999999999999999887777774 4665
No 159
>PHA02597 30.2 hypothetical protein; Provisional
Probab=82.38 E-value=2.5 Score=43.60 Aligned_cols=94 Identities=12% Similarity=0.119 Sum_probs=53.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+.... +. .. +..+.++..+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f-------------------~~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF-------------------SEVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc-------------------cEEEEeccCcc
Confidence 46799999999999975 56667764444433344556653210 00 00 00011111111
Q ss_pred hHHHHHH-HHhhCC-CEEEEECCCccCHHhhhhC--CeeEE
Q 002203 573 HKYEIVK-RLQERK-HICGMTGDGVNDAPALKKA--DIGIA 609 (954)
Q Consensus 573 qK~~iV~-~lq~~g-~~V~m~GDG~NDapALk~A--dVGIa 609 (954)
|-+++. ++++.| ..++|+||..+|+.|-++| ++-..
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 223332 333334 4588999999999999999 88543
No 160
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=80.26 E-value=1.5 Score=40.26 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=36.0
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCCC
Q 002203 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (954)
Q Consensus 486 Gli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 533 (954)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555567788899999999999999999999999866655555 445664
No 161
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=78.27 E-value=4.5 Score=45.48 Aligned_cols=91 Identities=11% Similarity=0.053 Sum_probs=65.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH----hCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 568 (954)
++.+++.++++.|++.|+++.++|.-+...|..+-++ +|+..... +..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~----------------------------~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD----------------------------ARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee----------------------------EEE
Confidence 4578999999999999999999999999999888877 66532110 111
Q ss_pred cChhhHHHHHHHHhh----CCCEEEEECCCccCHHhhhhCCeeEEec
Q 002203 569 VFPEHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVA 611 (954)
Q Consensus 569 vsP~qK~~iV~~lq~----~g~~V~m~GDG~NDapALk~AdVGIamg 611 (954)
..++-|...++.+-+ .-.-++|+||...|..+.+++..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 223344444443322 2467999999999999999998886553
No 162
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=77.62 E-value=2.7 Score=42.88 Aligned_cols=92 Identities=12% Similarity=0.062 Sum_probs=59.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe---c
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---V 569 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar---v 569 (954)
++.+++.+++++|+ .++.++|.-....+...-+++|+.... + ..+...+ +-.+ .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~------------------~~~~~~~~ 140 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDT------------------ANPDYLLP 140 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeec------------------ccCccCCC
Confidence 46789999999998 478999998888888888888885321 1 1111000 0000 1
Q ss_pred Chhh--HHHHHHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 570 FPEH--KYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 570 sP~q--K~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
.|.. =..+++.+......++|+||...|..+=++|++-
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 2322 1334444444456789999999999988888764
No 163
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=76.26 E-value=4.4 Score=41.25 Aligned_cols=90 Identities=14% Similarity=0.136 Sum_probs=56.9
Q ss_pred HHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHHHH
Q 002203 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEI 577 (954)
Q Consensus 498 ~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~~i 577 (954)
..++++.|++. +++.++||.....+...-++.|+.... ...+...+.. ..+-.|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHHHHH
Confidence 46899999875 899999999999999888889885321 1111111000 111112222233
Q ss_pred HHHHhhCCCEEEEECCCccCHHhhhhCCee
Q 002203 578 VKRLQERKHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 578 V~~lq~~g~~V~m~GDG~NDapALk~AdVG 607 (954)
.+.++-....+.|+||..+|+.+=++|++-
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 333433334588999999999999999874
No 164
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=68.93 E-value=66 Score=41.86 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 002203 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (954)
Q Consensus 275 ~~~~~~~~l~lli~~iP~aLp~~~~i~l~~ 304 (954)
+..++..+++..-.++|.++++++..+...
T Consensus 327 ~~~al~llv~~iP~~Lp~~vti~l~~~~~~ 356 (941)
T TIGR01517 327 FIIAVTIVVVAVPEGLPLAVTIALAYSMKK 356 (941)
T ss_pred HHHHHHHHHhhCCCchHHHHHHHHHHHHHH
Confidence 334444445555555555555555555443
No 165
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=67.91 E-value=11 Score=39.00 Aligned_cols=47 Identities=23% Similarity=0.314 Sum_probs=41.5
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002203 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (954)
Q Consensus 483 ~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 529 (954)
.+-|.+.++|..-|++.|++++|++++.+|+.+|.-..+.-+.+.++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 56799999999999999999999999999999998877766666654
No 166
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=67.82 E-value=12 Score=38.26 Aligned_cols=98 Identities=15% Similarity=0.196 Sum_probs=60.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhh------cceEE
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK------ADGFA 567 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~------~~vfa 567 (954)
+.+++.+++..++++|.+++|+|- +-||....++...+... .....+.++. ...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rgyf~~~~f~~~-------~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRGYFTEADFDKL-------HNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccccCccHHHHHHH-------HHHHHHHHHHcCCccceEEEC
Confidence 468999999999999999999996 33554433222111000 0001111111 11244
Q ss_pred ecChhh--------HHHHHHHHhhCC---CEEEEECCCccCHHhhhhCCeeEEe
Q 002203 568 GVFPEH--------KYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 568 rvsP~q--------K~~iV~~lq~~g---~~V~m~GDG~NDapALk~AdVGIam 610 (954)
.-.|++ ...+.+.+++.+ ....||||-..|..+-..|+++ ++
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 444543 345666676654 6778999999999999888887 54
No 167
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=67.81 E-value=82 Score=40.84 Aligned_cols=270 Identities=16% Similarity=0.098 Sum_probs=154.4
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCc
Q 002203 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPD 97 (954)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~aail~~~l~~~~~~~~~ 97 (954)
..-++.+|+.+++... .+.+..++-.....+ ++.+|...|...+...-.+.+.+....... .+
T Consensus 42 ~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 42 TTGLSEEEVKRRLKKYGPNELPEEKKRSLLKK------------FLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred ccCCCHHHHHHHHhhcCCccccccccCcHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 4456678888887743 444443333333333 344444444444444444445554443111 25
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe------EEE----EeCCeEEEEecCCcCCCcEEEEeCCCee
Q 002203 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK------TKV----LRDGRWSEQDASILVPGDVISIKLGDIV 167 (954)
Q Consensus 98 ~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~------~~V----~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~V 167 (954)
+.....++++..+...+.-++..++-++++++....... ..+ +.-|....+.+.|.+|-|...|+..+ .
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-L 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-c
Confidence 555555556666666888889988888888886654432 222 34688999999999999999999887 4
Q ss_pred ccceEEeecCceEEEeec--ccCCCccee---c---CCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhhccCCCC
Q 002203 168 PADARLLEGDPLKIDQSA--LTGESLPVT---K---NPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (954)
Q Consensus 168 PaD~~ll~g~~~~VdeS~--LTGEs~pv~---K---~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~ 239 (954)
=+|=-.|.|++.-|+--. .+.|..|.. + ..|..+.+|.-..--...|.-+.-|..+..-+..+.. .+.-..
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~-~t~l~~ 263 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEV-KTPLQR 263 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcccccc-CCcHHH
Confidence 555555656443332221 122333333 3 2477777777444334555566666665543332211 222222
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 002203 240 HFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (954)
Q Consensus 240 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~ 306 (954)
.+.+....+..++++..++..+...+.....+...+..++.-++++.--+.|.-+-+++.+....-+
T Consensus 264 ~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 264 KLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 3455555555555444444333333332222345567778888888888999998888888776544
No 168
>PRK10444 UMP phosphatase; Provisional
Probab=67.43 E-value=6.6 Score=42.42 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=40.4
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002203 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (954)
Q Consensus 486 Gli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 530 (954)
|.+.-.+.+-|++.++|+.|++.|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888888875
No 169
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=65.69 E-value=87 Score=39.71 Aligned_cols=194 Identities=16% Similarity=0.104 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEee-cCceEEEe
Q 002203 105 IVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKIDQ 183 (954)
Q Consensus 105 ~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~-g~~~~Vde 183 (954)
++++++..+...+.-++..++.+++.+....... + +.-++-|....+...|.+|-|.++++ |+.+-+|=
T Consensus 59 ~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~-----~-----~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg 128 (755)
T TIGR01647 59 VIILGLLLLNATIGFIEENKAGNAVEALKQSLAP-----K-----ARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADC 128 (755)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCC-----e-----EEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceE
Confidence 3333444444556667777777777665432211 1 11234578889999999999999996 44456666
Q ss_pred ecccCCCcceecC--CCCc----ccccceeecCeEEEEEEEecchhHHhhH---HHhhhccCCCCcHHHHHHHHHHHHHH
Q 002203 184 SALTGESLPVTKN--PYDE----VFSGSTCKQGEIEAVVIATGVHTFFGKA---AHLVDSTNQVGHFQKVLTAIGNFCIC 254 (954)
Q Consensus 184 S~LTGEs~pv~K~--~~~~----v~~Gs~v~~G~~~~~V~~tG~~T~~gki---~~l~~~~~~~~~~~~~~~~i~~~~~~ 254 (954)
-.+.|+..-+.-+ .|+. -..|..+..|....-=..++.-+..|.- .++.+.-++..+-...+.+....+..
T Consensus 129 ~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 129 RLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGL 208 (755)
T ss_pred EEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 6666664444332 2332 1346666666643222222222222221 11111111222111123333322222
Q ss_pred HHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHH
Q 002203 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308 (954)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~ 308 (954)
.++...++..++.+..+...+...+...+...++.+-.+.|.+++++...+...
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 222222232333332221112234556667777778888999999998887653
No 170
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=65.38 E-value=9.1 Score=41.55 Aligned_cols=48 Identities=25% Similarity=0.379 Sum_probs=36.7
Q ss_pred EEeccCCC----CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCCC
Q 002203 486 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (954)
Q Consensus 486 Gli~i~D~----lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 533 (954)
|.+.-.+. +=|++.++|++|++.|+++.++||....+...+. +++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 7889999999999999999999998877644443 445653
No 171
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=64.74 E-value=12 Score=39.92 Aligned_cols=89 Identities=21% Similarity=0.177 Sum_probs=53.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEec
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarv 569 (954)
|+=|++.+.++.+++.|++|..|||.+..- ...=-++.|.... ....+.+.... . ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----~------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----S------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----S------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----c------------ccc
Confidence 444789999999999999999999976542 2222344564321 00011000000 0 000
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEECCCccCHHh
Q 002203 570 FPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (954)
Q Consensus 570 sP~qK~~iV~~lq~~g-~~V~m~GDG~NDapA 600 (954)
..+-|...-+.++++| ++++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1234888888888885 578889999999775
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=62.93 E-value=12 Score=41.23 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.4
Q ss_pred CC-ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002203 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (954)
Q Consensus 494 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 534 (954)
+| |++.+++++|++.|+++.+.|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999888888888899999964
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=62.19 E-value=43 Score=36.56 Aligned_cols=31 Identities=13% Similarity=0.320 Sum_probs=27.2
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChH
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA 521 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~ 521 (954)
+.|+=|++.+..+.+++.|++|..+||....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3566789999999999999999999999854
No 174
>PLN02423 phosphomannomutase
Probab=61.93 E-value=12 Score=40.37 Aligned_cols=43 Identities=26% Similarity=0.255 Sum_probs=36.3
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CccCHHhhhh-CCeeEEeccchH
Q 002203 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 615 (954)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~m~GD----G~NDapALk~-AdVGIamg~gtd 615 (954)
-+|..-++.|+ ...-|++.|| |-||.+||+. -=.||.+.+-.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37999999999 6678899999 8999999996 778999964444
No 175
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=61.88 E-value=41 Score=33.64 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=66.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHH---HHHh-----CCCCCCCCCCcccCcccccccCcccHHHHhhhc
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~l-----Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 563 (954)
|..++++.+..++.++.|.+++-+|+...--|..+ -.+. +++.. ..+. +...+-..+. -
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~--------sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLL--------SPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEE--------CCcchhhhhh-c
Confidence 78999999999999999999999999986444332 2222 33221 1110 1011111100 1
Q ss_pred ceEEecChhhHHHHHHHHhhC-----CCEEEEECCCccCHHhhhhCCee
Q 002203 564 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 607 (954)
Q Consensus 564 ~vfarvsP~qK~~iV~~lq~~-----g~~V~m~GDG~NDapALk~AdVG 607 (954)
++..+-.-+.|....+.++.. ...++..|.-.+|+.|-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 234444457899999988863 56788899999999999987653
No 176
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=61.79 E-value=13 Score=40.96 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.2
Q ss_pred CC-ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002203 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (954)
Q Consensus 494 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 534 (954)
+| |++.+++++|+++|+++.++|+-....+...-+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999777777888999999963
No 177
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=59.84 E-value=29 Score=41.47 Aligned_cols=121 Identities=16% Similarity=0.056 Sum_probs=70.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH-hCCCCCCCC------CCcccCcccccccCcccHHHHhhhcceE
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYP------SSSLLGQDKDASIAALPVDELIEKADGF 566 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~------~~~l~g~~~~~~~~~~~~~~~~~~~~vf 566 (954)
+++++.+ .+++.|- ++++|+=....+..+|++ +|+..-... ...++|.- .+.
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i-----~g~------------ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFM-----KKP------------ 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeee-----cCC------------
Confidence 4555444 4456775 499999999999999987 898521000 01111110 000
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccch--HHHH--hccCEEEcCCCchhHHH
Q 002203 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADAT--DAAR--SASDIVLTEPGLSVIIS 635 (954)
Q Consensus 567 arvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gt--d~A~--~aADivL~~~~~~~i~~ 635 (954)
..+.=++|.+-++.........-+-||..||.|+|+.||-+.+++... ...+ --.-+|..|.++...+.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~~~p~ 242 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLVQRPT 242 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCcccCCCC
Confidence 012346788877743321122368999999999999999999997411 1111 13345555555544443
No 178
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=59.65 E-value=18 Score=36.48 Aligned_cols=90 Identities=27% Similarity=0.376 Sum_probs=61.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCCh----HHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEec
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarv 569 (954)
|++=+++.|..-++.|=++..+||..+ .+++..|+...|. ++.+ .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcc-------------------------eeeccC
Confidence 566778899999999999999999875 3556666666662 2221 134444
Q ss_pred Chh-hHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCe-eEEe
Q 002203 570 FPE-HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (954)
Q Consensus 570 sP~-qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdV-GIam 610 (954)
.|. .++.-...+|+++. -..-||.-||..|-|+|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 441 23334556777664 4588999999999999976 5544
No 179
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=59.26 E-value=16 Score=39.49 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=37.5
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEcc---CChHHHHHHHHHhCCC
Q 002203 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (954)
Q Consensus 486 Gli~i~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 533 (954)
|.+.-.+.+=+++.++|++|++.|++++++|| ..........+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555666778999999999999999999997 4466666666677764
No 180
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=58.41 E-value=20 Score=38.28 Aligned_cols=91 Identities=12% Similarity=0.087 Sum_probs=52.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++-||+.++++.|++. +++.++|.-+... +..|+.... . ..+ +.+. +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~-~~~~------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVL-RAGP------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeE-eccc------------------CCcCCCc
Confidence 4568999999999975 8999999865431 456653211 0 011 0000 0111222
Q ss_pred hH--HHHHHHHhhCCCEEEEECCC-ccCHHhhhhCCeeEEe
Q 002203 573 HK--YEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV 610 (954)
Q Consensus 573 qK--~~iV~~lq~~g~~V~m~GDG-~NDapALk~AdVGIam 610 (954)
-. ....+.+.-...-+.|+||. ..|+.+=++|++-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11 12223333234569999999 5999999999876543
No 181
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=55.37 E-value=26 Score=37.10 Aligned_cols=100 Identities=15% Similarity=0.136 Sum_probs=69.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecCh
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP 571 (954)
.++.||+.+.++.|++.|+.+.+.|+-....+..+-+..|+.... ...+.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 478899999999999999999999999988899999999986431 1111111110 001223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEe
Q 002203 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (954)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIam 610 (954)
+-=+.-.+.|.-....|..+.|..|.+.|-++|+.-+-.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 333344444433455689999999999999999876543
No 182
>PLN02151 trehalose-phosphatase
Probab=54.85 E-value=1.3e+02 Score=34.20 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=41.3
Q ss_pred hHHHHHHHHhhC-C------CEEEEECCCccCHHhhhhC-----CeeEEeccchHHHHhccCEEEcCCCchhHHHHH
Q 002203 573 HKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (954)
Q Consensus 573 qK~~iV~~lq~~-g------~~V~m~GDG~NDapALk~A-----dVGIamg~gtd~A~~aADivL~~~~~~~i~~ai 637 (954)
+|-..|+.+.+. + ..+.++||...|-.|++.. ++||-++.+.. ...|++.|.+ -..+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHH
Confidence 888888887654 2 2589999999999998853 67777763321 2368888854 34444443
No 183
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=54.07 E-value=38 Score=35.41 Aligned_cols=41 Identities=15% Similarity=0.211 Sum_probs=34.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 534 (954)
++-+++.++++++++. .++.++|--....+....+++|+.+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 4567889999999988 9999999877777888888999753
No 184
>PTZ00445 p36-lilke protein; Provisional
Probab=52.29 E-value=27 Score=36.58 Aligned_cols=62 Identities=15% Similarity=0.193 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEE--EeccCCC----------CCccHHHHHHHHHhCCCEE
Q 002203 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG--LLPLFDP----------PRHDSAETIRRALNLGVNV 512 (954)
Q Consensus 445 ~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lG--li~i~D~----------lr~~~~~~I~~l~~aGI~v 512 (954)
.+.....++.+.+.|.|++++-... |+++ .=+--+| ++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 4556667788899999999876543 3332 0012233 7999999999999999999
Q ss_pred EEEccCC
Q 002203 513 KMITGDQ 519 (954)
Q Consensus 513 ~miTGD~ 519 (954)
.++|=-.
T Consensus 95 ~VVTfSd 101 (219)
T PTZ00445 95 SVVTFSD 101 (219)
T ss_pred EEEEccc
Confidence 9999544
No 185
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=50.40 E-value=3.6e+02 Score=29.10 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=44.2
Q ss_pred CCCCceEEEEeccCCCCCccHHHHHHHHHhC---CCEEEEEccCChHHHHHHHHH
Q 002203 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (954)
Q Consensus 478 ~e~~l~~lGli~i~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 529 (954)
...+|.=+=+++=.+-+.||..++|+.++.. |..|.-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 4567777777777778899999999999999 999997888888999888764
No 186
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.17 E-value=68 Score=35.67 Aligned_cols=140 Identities=16% Similarity=0.161 Sum_probs=78.5
Q ss_pred cCCCCCccHHHHHHHHHhCCCEE---EEEccCChHHHH------HHHHHhCCCCCCCCC--C-----------------c
Q 002203 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIGK------ETGRRLGMGTNMYPS--S-----------------S 541 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA~------~ia~~lGi~~~~~~~--~-----------------~ 541 (954)
+.++++++.++.|+.+++.|++. .++-||+++... ..|+++||....+.- . .
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 45677888999999998888763 556688876543 466778885421100 0 0
Q ss_pred ccC----ccccc------------------ccCcccHHHHhhhcceEEecChhhHHHHHHHHhh--CCCEEEEECCC-cc
Q 002203 542 LLG----QDKDA------------------SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG-VN 596 (954)
Q Consensus 542 l~g----~~~~~------------------~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~--~g~~V~m~GDG-~N 596 (954)
+.| .+... .++...+..+...-..|.-+||.-=.++++...- .|..|+++|-| +-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 000 00000 1111122223222234556677766666665543 48999999997 44
Q ss_pred CHH---hhhhCCeeEEec-c--c-hHHHHhccCEEEcCCC
Q 002203 597 DAP---ALKKADIGIAVA-D--A-TDAARSASDIVLTEPG 629 (954)
Q Consensus 597 Dap---ALk~AdVGIamg-~--g-td~A~~aADivL~~~~ 629 (954)
=.| .|.+++.-+.+- . . ...+-..||+|++-=+
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVG 211 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecC
Confidence 444 566777777663 1 1 1222347899986533
No 187
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=50.13 E-value=20 Score=35.84 Aligned_cols=84 Identities=13% Similarity=0.090 Sum_probs=50.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++.||+.++++ ++.++|.-+.......-+++|+.... ..++.+.+ .....|.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-------------------~~~~KP~ 141 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDT-------------------VRAYKPD 141 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhh-------------------cCCCCCC
Confidence 57899999998 36788988887777778888874321 00111100 0011222
Q ss_pred hH--HHHHHHHhhCCCEEEEECCCccCHHhhhhC
Q 002203 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (954)
Q Consensus 573 qK--~~iV~~lq~~g~~V~m~GDG~NDapALk~A 604 (954)
-. ....+.+.-....+.|+||...|+.+-++|
T Consensus 142 p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 22 333444443445699999999998776653
No 188
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=49.89 E-value=12 Score=37.56 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=38.1
Q ss_pred cCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002203 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (954)
+.=..||++.+.++.|.+. .++.+.|--....|..+.+.++..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 3346799999999999988 999999999999999999998864
No 189
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=47.20 E-value=15 Score=34.57 Aligned_cols=79 Identities=23% Similarity=0.234 Sum_probs=45.3
Q ss_pred HHHHHHHHcCCeEEEEEEeecC--C-CCCCC---CCCCceEEEEeccCCCCCccHHHHHHHHHhCCCE-EEEEccCChHH
Q 002203 450 AVIDKFAERGLRSLGVARQEIP--E-KTKES---PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLAI 522 (954)
Q Consensus 450 ~~i~~~a~~GlR~L~vA~~~~~--~-~~~~~---~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~-v~miTGD~~~t 522 (954)
..++.+.+.|+++..+.-+.-+ . ..+.+ ...+..++=+ =-+.+.+++.+++|.+.|++ +|+.+|...+.
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv----~~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~ 93 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVV----CVPPDKVPEIVDEAAALGVKAVWLQPGAESEE 93 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-----S-HHHHHHHHHHHHHHT-SEEEE-TTS--HH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEE----EcCHHHHHHHHHHHHHcCCCEEEEEcchHHHH
Confidence 3455666689988877543310 0 00111 1122222111 12456889999999999996 99999999999
Q ss_pred HHHHHHHhCC
Q 002203 523 GKETGRRLGM 532 (954)
Q Consensus 523 A~~ia~~lGi 532 (954)
+.+.|++.|+
T Consensus 94 ~~~~a~~~gi 103 (116)
T PF13380_consen 94 LIEAAREAGI 103 (116)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHcCC
Confidence 9999999887
No 190
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=46.80 E-value=15 Score=39.81 Aligned_cols=118 Identities=15% Similarity=0.141 Sum_probs=64.7
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhh-----cceEEecC
Q 002203 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK-----ADGFAGVF 570 (954)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-----~~vfarvs 570 (954)
++..++++.|++.|.++.+.|+.............|+. .+-..+.. ..++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999886644332222222211 01111110 01122222
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCc-cCHHhhhhCCeeEE-eccch----H--HHHhccCEEEcCCCchhHHHH
Q 002203 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIA-VADAT----D--AARSASDIVLTEPGLSVIISA 636 (954)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~m~GDG~-NDapALk~AdVGIa-mg~gt----d--~A~~aADivL~~~~~~~i~~a 636 (954)
|+-=..+.+.+.-....+.|+||.. +|+.+=+.+++--. +..|. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3222233344433456799999996 89999998887443 33331 1 1223467777 456666543
No 191
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=45.28 E-value=48 Score=39.91 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=31.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCCh------------HHHHHHHHHhCCC
Q 002203 494 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 533 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 533 (954)
+-|+++++++.|++.|+++.++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 2355667777763
No 192
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=45.12 E-value=1.3e+02 Score=31.55 Aligned_cols=192 Identities=15% Similarity=0.151 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCc-eEEEeec
Q 002203 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSA 185 (954)
Q Consensus 107 ~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~-~~VdeS~ 185 (954)
++++..+..+++.+...+..+.+++....... + .+.-++-|....+...|.+|-|.++++.++ +-.|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~----~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----K----KVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----E----EEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----c----cEEEEeccccccchHhhccceeeeecccccccccCccc
Confidence 45555566677777777777777765443321 1 122234478888888889999988886532 2222222
Q ss_pred cc-CCCcceecC--CCCc---------ccccceeecCeEEEEEEEecchhHHhhH---HHhhhccCCCCcHHHHHHHHHH
Q 002203 186 LT-GESLPVTKN--PYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGKA---AHLVDSTNQVGHFQKVLTAIGN 250 (954)
Q Consensus 186 LT-GEs~pv~K~--~~~~---------v~~Gs~v~~G~~~~~V~~tG~~T~~gki---~~l~~~~~~~~~~~~~~~~i~~ 250 (954)
|. |... +.-. .|+. ...|..+..|....-=...|.-+..|.- .++.+...+........++...
T Consensus 73 l~~g~~~-vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 73 LESGSAY-VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EESSEEE-EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred eeccccc-cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 32 2111 1100 1221 1267777777633211122222333321 1222222344443344444444
Q ss_pred HHHHHHHHHHHHHHHHhhhcccc-chHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHH
Q 002203 251 FCICSIAVGIVAEIIIMYPVQHR-KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308 (954)
Q Consensus 251 ~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~~~ 308 (954)
.+...+...+++..++.+..+.. .....+...+...+..+=...|.++++++..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~ 210 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAI 210 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHH
T ss_pred HHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHH
Confidence 33333333233333333322222 12233445555566666677788888877776544
No 193
>PRK00208 thiG thiazole synthase; Reviewed
Probab=44.32 E-value=4.4e+02 Score=28.45 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=44.4
Q ss_pred CCCCCceEEEEeccCCCCCccHHHHHHHHHhC---CCEEEEEccCChHHHHHHHHH
Q 002203 477 SPGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (954)
Q Consensus 477 ~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 529 (954)
..+.+|.=+=+++=.+-+.||..++|+.++.. |..|.=.+-|++..|++++.-
T Consensus 88 ~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 88 ALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred HhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34667777778877788899999999999999 999997777888888888764
No 194
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=44.25 E-value=24 Score=33.95 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=28.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHH
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 522 (954)
+++.+++.++++++++.|++++.+||.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6788999999999999999999999998654
No 195
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=43.82 E-value=77 Score=35.98 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=34.2
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh-C
Q 002203 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G 531 (954)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l-G 531 (954)
-|++++.+++|+++|+++.++|+-....+..+-+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999988886 6
No 196
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=43.42 E-value=5.4e+02 Score=33.30 Aligned_cols=20 Identities=30% Similarity=0.401 Sum_probs=11.1
Q ss_pred CeEEEEecCCcCCCcEEEEe
Q 002203 143 GRWSEQDASILVPGDVISIK 162 (954)
Q Consensus 143 g~~~~I~~~~Lv~GDIV~l~ 162 (954)
|....+..-|.+|-|.+.++
T Consensus 152 GDiV~l~~Gd~VPaDg~li~ 171 (867)
T TIGR01524 152 GDLIELAAGDIIPADARVIS 171 (867)
T ss_pred CCEEEECCCCEEcccEEEEe
Confidence 45555555555555555554
No 197
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=43.41 E-value=92 Score=33.83 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=26.0
Q ss_pred cCCCCCccHHHHHHHHHhCCCEEE-EEccCCh-HHHHHHHHHh
Q 002203 490 LFDPPRHDSAETIRRALNLGVNVK-MITGDQL-AIGKETGRRL 530 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v~-miTGD~~-~tA~~ia~~l 530 (954)
+-|-|-++..+.++.|++.|++.. +++=... +....+++..
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 335555778888888888888844 5555443 3445555554
No 198
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=43.31 E-value=96 Score=33.41 Aligned_cols=134 Identities=17% Similarity=0.157 Sum_probs=67.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEe--c
Q 002203 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (954)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar--v 569 (954)
-.+|+++.+.++.|++.+|.+.+.|+-=-.+..++=++-|...+. ..+........-++ ....|-. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~g--------~l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDEDG--------VLVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TTS--------BEEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCcc--------eEeecCCCce
Confidence 467999999999999999999999976666666666666653221 11111000000000 0000100 0
Q ss_pred ChhhHHH-------HHHHHhhCCCEEEEECCCccCHHhhhhC---CeeEEec--c-c----hHHHHhccCEEEcCCCchh
Q 002203 570 FPEHKYE-------IVKRLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPGLSV 632 (954)
Q Consensus 570 sP~qK~~-------iV~~lq~~g~~V~m~GDG~NDapALk~A---dVGIamg--~-g----td~A~~aADivL~~~~~~~ 632 (954)
-+-.|-+ .-+.++.+ ..|...||..-|+.|-.-. +.-+.+| + . -+.=+++=||||.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~R-~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKKR-TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhccC-CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0111211 12233333 4688999999999998765 4444445 2 2 2344678999999997555
Q ss_pred HHHHH
Q 002203 633 IISAV 637 (954)
Q Consensus 633 i~~ai 637 (954)
++.+|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 199
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=43.17 E-value=44 Score=32.71 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=26.8
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHhhcccccccCcchHhHHHHHHHHHHHHHHHHH
Q 002203 785 IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840 (954)
Q Consensus 785 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (954)
.++| +|++++.++.+....+..|. +.-|.+|.|.+++++.....++++|
T Consensus 33 ~~HP--~L~~~M~~~y~~~~~lm~~s-----py~G~~s~~~ftv~fv~m~~~llfD 81 (155)
T PF10777_consen 33 RNHP--YLCLAMYAAYLAVAALMYYS-----PYFGLGSVWGFTVFFVVMAAFLLFD 81 (155)
T ss_pred HhCc--HHHHHHHHHHHHHHHHHHhc-----chhhhHHHHHHHHHHHHHHHHHHhh
Confidence 4567 66677777765544444442 2223456666665555555555555
No 200
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=42.90 E-value=7.5e+02 Score=32.21 Aligned_cols=201 Identities=12% Similarity=0.068 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----e-EEE----EeCCeEEEEecCCcCCCcEEEEeCCCeeccce
Q 002203 102 VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-----K-TKV----LRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (954)
Q Consensus 102 ~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~-----~-~~V----~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~ 171 (954)
+++++..++ ....-++..++-+++.++...... + ..+ +.-|....+...|.+|-|.+.++..+ .=+|=
T Consensus 44 ~vi~~~~~i-~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~-l~Vde 121 (917)
T TIGR01116 44 LILVANAIV-GVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT-LRVDQ 121 (917)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc-eEEEc
Confidence 333333444 444444445555566656443222 1 112 24588899999999999999997652 23444
Q ss_pred EEeecCceEEEeec--ccCCCc-ce-e---cCCCCcccccceeecCeEEEEEEEecchhHHhhHHHhhh-ccCCCCcHHH
Q 002203 172 RLLEGDPLKIDQSA--LTGESL-PV-T---KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQK 243 (954)
Q Consensus 172 ~ll~g~~~~VdeS~--LTGEs~-pv-~---K~~~~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~-~~~~~~~~~~ 243 (954)
-.|.|++.-|.-.. ..++.. +. . -..|..+.+|....-=...|.=+..|.-... +...-. .+.-...+.+
T Consensus 122 S~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--~~~~~~~~t~lq~~l~~ 199 (917)
T TIGR01116 122 SILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDE--MRAAEQEDTPLQKKLDE 199 (917)
T ss_pred ccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHH--hhccCCCCCCHHHHHHH
Confidence 44444432222211 111111 11 1 1356777777643322233333444431111 111111 1222233444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------hhh-ccccchHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 002203 244 VLTAIGNFCICSIAVGIVAEIII--------MYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (954)
Q Consensus 244 ~~~~i~~~~~~~i~~~~~~~~~~--------~~~-~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~ 306 (954)
....+..+.+++.++..++.... .|. .....+..++..+++..-.++|..+++++..+....+
T Consensus 200 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~ 271 (917)
T TIGR01116 200 FGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA 271 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHH
Confidence 44444443222211111111100 010 1112334455566777778889888888888776543
No 201
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=42.60 E-value=1.1e+02 Score=31.39 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=44.6
Q ss_pred hccccccccCC-HHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHhhhhhHHHHHHHHHHHHHHHHcC
Q 002203 13 KNESVDLERIP-IEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANG 91 (954)
Q Consensus 13 ~~~~~~~~~~~-~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~aail~~~l~~~ 91 (954)
.+..+|++++. .+++.+++. ...++.+|+.+|+++--.. ++.++.|...+. .-+.++.++++++
T Consensus 58 ~~~~~nl~~l~~v~~l~~~~~--~~~~~~~ea~~~L~~I~~~---~~~y~~~~~~l~--------~~l~~~~fa~lfg-- 122 (193)
T PF06738_consen 58 PPRGVNLDKLAAVNRLSRRIV--AGQLSLEEAIERLDEIDRE---PPRYPPWLVILA--------AGLASAAFALLFG-- 122 (193)
T ss_pred CCCCcCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHhhC---CCCCCHHHHHHH--------HHHHHHHHHHHHC--
Confidence 34455555543 345555544 3689999999999873221 124676655433 1223333344433
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHH
Q 002203 92 GGRDPDWQDFVGIIVLLVINSTISF 116 (954)
Q Consensus 92 ~~~~~~~~~~~~I~~~~~i~~~i~~ 116 (954)
++|.+.+.-.++-++...+..
T Consensus 123 ----g~~~~~~~a~i~g~~~~~~~~ 143 (193)
T PF06738_consen 123 ----GSWIDMIVAFILGLLVGLLRQ 143 (193)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHH
Confidence 367776554444444433333
No 202
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=41.85 E-value=34 Score=37.39 Aligned_cols=47 Identities=23% Similarity=0.235 Sum_probs=40.8
Q ss_pred EEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002203 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (954)
Q Consensus 484 ~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 530 (954)
+=|.+.--+.+=|++.++|++|+++|++++.+|--...+....++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34788888889999999999999999999999999988888666654
No 203
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=41.76 E-value=14 Score=32.54 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=16.9
Q ss_pred EecCCcCCCcEEEE-eCCCeecc
Q 002203 148 QDASILVPGDVISI-KLGDIVPA 169 (954)
Q Consensus 148 I~~~~Lv~GDIV~l-~~Gd~VPa 169 (954)
+.-.+|.+||.|.+ ++||+||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 44678999999998 79999995
No 204
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=41.14 E-value=1e+03 Score=31.65 Aligned_cols=214 Identities=15% Similarity=0.177 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCCeeccceEEee---cCceE
Q 002203 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE---GDPLK 180 (954)
Q Consensus 104 I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~---g~~~~ 180 (954)
-++++++........-++.+++.++|++ +.. ......+ ++-|....+...|.+|-|.++++ |+.+-
T Consensus 196 ~~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iP 264 (1054)
T TIGR01657 196 SLCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMP 264 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEec
Confidence 3445555556666777777887777654 321 1122222 35688999999999999999997 55566
Q ss_pred EEeecccCCCcceecC--CCCcc--cc--------c------------ceeecCeEEEEEEEe-cchhHHhhHHHhhhcc
Q 002203 181 IDQSALTGESLPVTKN--PYDEV--FS--------G------------STCKQGEIEAVVIAT-GVHTFFGKAAHLVDST 235 (954)
Q Consensus 181 VdeS~LTGEs~pv~K~--~~~~v--~~--------G------------s~v~~G~~~~~V~~t-G~~T~~gki~~l~~~~ 235 (954)
.|=-.+.|+ .-|.-. .|+.. .. | ..+..|.....+... |..+.. ..+-.+
T Consensus 265 aD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~----~vV~~T 339 (1054)
T TIGR01657 265 CDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCL----AIVVRT 339 (1054)
T ss_pred ceEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEE----EEEEeC
Confidence 677777774 222221 23221 11 1 113334332222111 111111 112111
Q ss_pred C---CCCcHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHhhcCCchhHHHHHHH
Q 002203 236 N---QVGHFQ----------KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (954)
Q Consensus 236 ~---~~~~~~----------~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aLp~~~~i~l 302 (954)
. ..+.+. ...++-...++..++++.++.+++.+ .........+...+...+..+=.+.|..+++++
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~-~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTI-IELIKDGRPLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHH
Confidence 1 122222 22233332233322222222221111 111111123334455556667788899999999
Q ss_pred HHHHHHhhcCCceeccCchhhhhcCceEEEeCCCCccccCceee
Q 002203 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV 346 (954)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~iE~Lg~v~~I~~DKTGTLT~n~m~v 346 (954)
.++... +.-.|.+-.++|.+-.---|.|+.++
T Consensus 419 ti~l~~------------~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 419 SIGINN------------SLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHHHH------------HHHHHHHCCEEEcCcccceecceeeE
Confidence 988643 45667778889998888778777765
No 205
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.85 E-value=1.1e+02 Score=34.13 Aligned_cols=138 Identities=15% Similarity=0.199 Sum_probs=73.1
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCCCCCC--CCc----------------
Q 002203 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYP--SSS---------------- 541 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~--~~~---------------- 541 (954)
+..+++++.++.++.+++. |++ +.++-||+++.. ...|+++||....+. ...
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~ 89 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADP 89 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888876 665 355568776543 456778888532211 000
Q ss_pred -ccC----cccccc------------------cCcccHHHHhhhcceEEecChhhHHHHHHHHh--hCCCEEEEEC-CCc
Q 002203 542 -LLG----QDKDAS------------------IAALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ERKHICGMTG-DGV 595 (954)
Q Consensus 542 -l~g----~~~~~~------------------~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq--~~g~~V~m~G-DG~ 595 (954)
+.| .+.... ++...+..+..+-..|.-+||.-=.++++... -.|..|+++| -|.
T Consensus 90 ~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~ 169 (296)
T PRK14188 90 AIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNL 169 (296)
T ss_pred CCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcc
Confidence 000 000000 11111222222223355566665555555543 2489999999 444
Q ss_pred cCHH---hhhhCCeeEEec-c---chHHHHhccCEEEcC
Q 002203 596 NDAP---ALKKADIGIAVA-D---ATDAARSASDIVLTE 627 (954)
Q Consensus 596 NDap---ALk~AdVGIamg-~---gtd~A~~aADivL~~ 627 (954)
-=.| .|.+++.-+.+- + ..+.+-..||+|+.-
T Consensus 170 mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 170 VGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred hHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 4433 566677766663 2 222233478999864
No 206
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=40.76 E-value=33 Score=37.60 Aligned_cols=48 Identities=23% Similarity=0.261 Sum_probs=35.9
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCCC
Q 002203 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (954)
Q Consensus 486 Gli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 533 (954)
|.+.-.+.+=+++.++|++|++.|+++..+|+....+..... +++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 455556777889999999999999999999997654444332 446663
No 207
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=40.51 E-value=3.9e+02 Score=35.16 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=10.2
Q ss_pred CcEEEEeCCCeeccceEEee
Q 002203 156 GDVISIKLGDIVPADARLLE 175 (954)
Q Consensus 156 GDIV~l~~Gd~VPaD~~ll~ 175 (954)
|-...+...|.+|-|.++++
T Consensus 149 g~~~~I~~~~lv~GDiv~l~ 168 (997)
T TIGR01106 149 GEKMSINAEQVVVGDLVEVK 168 (997)
T ss_pred CEEEEeeHHHCCCCCEEEEC
Confidence 44445555555555555553
No 208
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=39.91 E-value=6e+02 Score=33.04 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=21.0
Q ss_pred CCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCc
Q 002203 142 DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (954)
Q Consensus 142 dg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~ 178 (954)
-|....+..-|.+|-|.+.++.. -+=+|=-.|.|++
T Consensus 174 ~GDiV~l~~Gd~IPaDg~li~g~-~l~VDES~LTGES 209 (903)
T PRK15122 174 PGDIVHLSAGDMIPADVRLIESR-DLFISQAVLTGEA 209 (903)
T ss_pred CCCEEEECCCCEEeeeEEEEEcC-ceEEEccccCCCC
Confidence 46677777777777777766532 2334444444443
No 209
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=39.39 E-value=1.2e+02 Score=33.13 Aligned_cols=30 Identities=7% Similarity=0.165 Sum_probs=19.8
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCccCHHh
Q 002203 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPA 600 (954)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~m~GDG~NDapA 600 (954)
|++-.++++.+++.-..-.++|=|+|+..-
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 455567788888764444567999885543
No 210
>PRK11507 ribosome-associated protein; Provisional
Probab=39.35 E-value=33 Score=29.31 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=23.3
Q ss_pred EEEeCCeEEEEecCCcCCCcEEEEeC
Q 002203 138 KVLRDGRWSEQDASILVPGDVISIKL 163 (954)
Q Consensus 138 ~V~Rdg~~~~I~~~~Lv~GDIV~l~~ 163 (954)
.|..||+...-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57889999999999999999999854
No 211
>PTZ00174 phosphomannomutase; Provisional
Probab=39.27 E-value=39 Score=36.34 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=31.8
Q ss_pred EEeccCC-CCCccHHHHHHHHHhCCCEEEEEccCChHHHHH
Q 002203 486 GLLPLFD-PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 525 (954)
Q Consensus 486 Gli~i~D-~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ 525 (954)
|.+.=.| ++-+.+.++|+++++.|+++++.||.+......
T Consensus 14 GTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~ 54 (247)
T PTZ00174 14 GTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKE 54 (247)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 4344343 477889999999999999999999999875543
No 212
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=38.99 E-value=4.5e+02 Score=34.08 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 002203 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (954)
Q Consensus 275 ~~~~~~~~l~lli~~iP~aLp~~~~i~l~~~~ 306 (954)
+..++..+++..-.+.|.++++++..+....+
T Consensus 275 ~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 275 FTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 34455556666667777777777777655443
No 213
>COG5547 Small integral membrane protein [Function unknown]
Probab=38.12 E-value=1.5e+02 Score=24.13 Aligned_cols=49 Identities=20% Similarity=0.407 Sum_probs=29.3
Q ss_pred HHHHhhhhhHH--HHHHHHHHHHHHHHcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002203 65 KFLGFMWNPLS--WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (954)
Q Consensus 65 ~~l~~~~~~~~--~il~~aail~~~l~~~~~~~~~~~~~~~I~~~~~i~~~i~~~~e~~ 121 (954)
.|+++|+-|+. .+.++.|++-+.++ -|-. +.++++..+...++++.+++
T Consensus 2 eflk~fkypIIgglvglliAili~t~G-------fwKt-ilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 2 EFLKKFKYPIIGGLVGLLIAILILTFG-------FWKT-ILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred cHHHHhccchHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 36777887775 23333444444433 4444 45556677778888887765
No 214
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=37.79 E-value=26 Score=24.24 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=13.3
Q ss_pred CCCCCHHHHHHHHHh
Q 002203 35 REGLTSDEGAHRLHV 49 (954)
Q Consensus 35 ~~GLs~~e~~~r~~~ 49 (954)
+.|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999975
No 215
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=36.62 E-value=1e+03 Score=30.88 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEE-ecCCcCCCcEEEEeCCCeeccceEEeec-C
Q 002203 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQ-DASILVPGDVISIKLGDIVPADARLLEG-D 177 (954)
Q Consensus 100 ~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I-~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g-~ 177 (954)
+..--++++++..+-.++..++..++.+++.+...... . +...+ +-++-.-|....+...|.+|-|.++++. +
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~----~-~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd 195 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVS----N-TATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD 195 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----C-eEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC
Confidence 33334444445555566666777787777776544322 1 11111 1000001568899999999999999964 4
Q ss_pred ceEEEeecccCCCcceec
Q 002203 178 PLKIDQSALTGESLPVTK 195 (954)
Q Consensus 178 ~~~VdeS~LTGEs~pv~K 195 (954)
.+-+|=-.+.|+..-+.-
T Consensus 196 ~IPaDg~li~g~~l~VDE 213 (902)
T PRK10517 196 MIPADLRILQARDLFVAQ 213 (902)
T ss_pred EEeeeEEEEEcCceEEEe
Confidence 456676677776654443
No 216
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=36.03 E-value=4e+02 Score=33.32 Aligned_cols=82 Identities=16% Similarity=0.082 Sum_probs=52.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCc-EEEEeCCCeeccceEEeec
Q 002203 99 QDFVGIIVLLVINSTISFIEENNAG-NAAAALMANLAPKTKVLRDGRWSEQDASILVPGD-VISIKLGDIVPADARLLEG 176 (954)
Q Consensus 99 ~~~~~I~~~~~i~~~i~~~~e~~a~-~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GD-IV~l~~Gd~VPaD~~ll~g 176 (954)
...+.+.++++++.+++.+.|..++ ++.+++.++..... +-.-. -++-|. ...+...+.+|-|.++++.
T Consensus 63 ~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~----~~~a~-----vir~g~~~~~V~~~eL~~GDiV~v~~ 133 (679)
T PRK01122 63 GFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK----DTFAR-----KLREPGAAEEVPATELRKGDIVLVEA 133 (679)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCeEE-----EEECCCEEEEEEHHHcCCCCEEEEcC
Confidence 3566777888888888887776665 55555555433221 11111 223455 6889999999999999954
Q ss_pred -CceEEEeecccCC
Q 002203 177 -DPLKIDQSALTGE 189 (954)
Q Consensus 177 -~~~~VdeS~LTGE 189 (954)
+.+-+|=-.+.|+
T Consensus 134 Gd~IPaDG~vieG~ 147 (679)
T PRK01122 134 GEIIPADGEVIEGV 147 (679)
T ss_pred CCEEEEEEEEEEcc
Confidence 4455666666664
No 217
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=35.08 E-value=23 Score=29.82 Aligned_cols=24 Identities=33% Similarity=0.536 Sum_probs=14.1
Q ss_pred EEEeCCeEEEEecCCcCCCcEEEE
Q 002203 138 KVLRDGRWSEQDASILVPGDVISI 161 (954)
Q Consensus 138 ~V~Rdg~~~~I~~~~Lv~GDIV~l 161 (954)
.|..||+.+.-.-..|.|||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 367799999999999999999999
No 218
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.57 E-value=1.4e+02 Score=32.84 Aligned_cols=138 Identities=13% Similarity=0.189 Sum_probs=74.5
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCCCCCCCC-------------------
Q 002203 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYPSS------------------- 540 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~~------------------- 540 (954)
+.+.+|.+.++-++.+++. |++ ..++.||+++.. ...|+++|+....+.-.
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 89 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDP 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456677888888888776 665 346678876544 35677788854211100
Q ss_pred cccC----ccccc------------------ccCcccHHHHhhhcceEEecChhhHHHHHHHHhh--CCCEEEEECC-Cc
Q 002203 541 SLLG----QDKDA------------------SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGD-GV 595 (954)
Q Consensus 541 ~l~g----~~~~~------------------~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~--~g~~V~m~GD-G~ 595 (954)
.+.| .+... .++...+..+...-..|.-+||.-=.++++...- .|..++++|- |+
T Consensus 90 ~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~i 169 (284)
T PRK14179 90 TWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNI 169 (284)
T ss_pred CCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 0000 00000 0111122222222233556677765555555442 4899999999 55
Q ss_pred cCHH---hhhhCCeeEEe--ccch--HHHHhccCEEEcC
Q 002203 596 NDAP---ALKKADIGIAV--ADAT--DAARSASDIVLTE 627 (954)
Q Consensus 596 NDap---ALk~AdVGIam--g~gt--d~A~~aADivL~~ 627 (954)
-=.| +|.+++.-+.+ +... ...-..||+|+.-
T Consensus 170 vG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 170 VGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 5555 56666666665 2222 2223479999864
No 219
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=33.70 E-value=1.8e+02 Score=34.76 Aligned_cols=148 Identities=18% Similarity=0.151 Sum_probs=82.9
Q ss_pred eCCeEEEEecCCcCCCcEEEEeCCCeeccceEEeecCceEEEeecccCCCcceecCCCCcccccceeecCe---------
Q 002203 141 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGE--------- 211 (954)
Q Consensus 141 Rdg~~~~I~~~~Lv~GDIV~l~~Gd~VPaD~~ll~g~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~--------- 211 (954)
+-|....+...|.+|-|.+.++- ..=+|--.+.|++.-+.-.. |+. ...|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 45888889999999999998865 44456666666543333321 443 24677788888654322
Q ss_pred EEEEEEEecchhHHhhHHHhhhccCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHhhh--ccccchHHHHHHHHHHHHh
Q 002203 212 IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL-TAIGNFCICSIAVGIVAEIIIMYP--VQHRKYRDGIDNLLVLLIG 288 (954)
Q Consensus 212 ~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~-~~i~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~lli~ 288 (954)
..+.++++|.+|+ ..-.....+.. ..+..+.+.+.++.++......+. .+...+..++..++...-+
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 2233445666542 11011122222 333333332222222222222221 1344566777888888889
Q ss_pred hcCCchhHHHHHHHHHHH
Q 002203 289 GIPIAMPTVLSVTMAIGS 306 (954)
Q Consensus 289 ~iP~aLp~~~~i~l~~~~ 306 (954)
++|.++|++...+.....
T Consensus 195 aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLA 212 (499)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 999999998888876654
No 220
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=33.58 E-value=77 Score=35.50 Aligned_cols=149 Identities=16% Similarity=0.142 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEEEeecCCCC--------CCCCCCCceEEEEeccCCCCCc--cHHHHHHHHHhCCCE--
Q 002203 444 VRKKVHAVIDKFAERGLRSLGVARQEIPEKT--------KESPGAPWQLVGLLPLFDPPRH--DSAETIRRALNLGVN-- 511 (954)
Q Consensus 444 ~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~--------~~~~e~~l~~lGli~i~D~lr~--~~~~~I~~l~~aGI~-- 511 (954)
.-+...++++-+.+.|++=+.++.|..+-.. .+..+.+|. +|++-=-....- -+.-.|-.|...||-
T Consensus 149 mveSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPLH-lGVTEAG~~~~G~IKSaigig~LL~~GIGDT 227 (346)
T TIGR00612 149 MVQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPLH-LGVTEAGMGVKGIVKSSAGIGILLARGIGDT 227 (346)
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCce-eccccCCCCCCchhHHHHHHHHHHhhCCCCe
Confidence 3445556677777888888888887633211 112223332 344432222222 234456788888883
Q ss_pred E-EEEccCCh---HHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh---hHHHHHHHHhh-
Q 002203 512 V-KMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE---HKYEIVKRLQE- 583 (954)
Q Consensus 512 v-~miTGD~~---~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~---qK~~iV~~lq~- 583 (954)
+ +=+|+|.. .+|.+|=+.+|+-..... .+ . +.-|.|+.-+ .=.++-+.++.
T Consensus 228 IRVSLT~dP~~EV~va~~IL~slglr~~g~~--ii-S------------------CPtCGR~~~dl~~~~~~ve~~l~~~ 286 (346)
T TIGR00612 228 IRVSLTDDPTHEVPVAFEILQSLGLRARGVE--IV-A------------------CPSCGRTGFDVEKVVRRVQEALFHL 286 (346)
T ss_pred EEEECCCCcHHHHHHHHHHHHHcCCCcCCCe--EE-E------------------CCCCCCcCCCHHHHHHHHHHHHhcC
Confidence 3 34788874 467888889998643110 00 0 1113343211 11123333443
Q ss_pred -CCCEEEEECCCccCHHhhhhCCeeEEec-cch
Q 002203 584 -RKHICGMTGDGVNDAPALKKADIGIAVA-DAT 614 (954)
Q Consensus 584 -~g~~V~m~GDG~NDapALk~AdVGIamg-~gt 614 (954)
..-.||..|-=+|-..--++||+|||-| .|.
T Consensus 287 ~~~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 287 KTPLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCCCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 3578999999999999999999999987 543
No 221
>PF05975 EcsB: Bacterial ABC transporter protein EcsB; InterPro: IPR010288 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family consists of several bacterial ABC transporter proteins which are homologous to the EcsB protein of Bacillus subtilis. EcsB is thought to encode a hydrophobic protein with six membrane-spanning helices in a pattern found in other hydrophobic components of ABC transporters [].
Probab=33.05 E-value=8.1e+02 Score=28.20 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002203 644 FQRMKNYTIYAVSITIRIVLGF 665 (954)
Q Consensus 644 ~~~i~~~i~~~l~~ni~~~~~~ 665 (954)
.+...||..|.+--++.+.+.+
T Consensus 13 ~k~~~kYlr~v~ndh~~l~l~~ 34 (386)
T PF05975_consen 13 WKEQLKYLRYVFNDHFVLYLIF 34 (386)
T ss_pred HHHHHHHHHHHhccHHHHHHHH
Confidence 4445567777765555444443
No 222
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=32.91 E-value=5.8e+02 Score=29.03 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=14.1
Q ss_pred HHHHHhCC--CEEEEEccCCh
Q 002203 502 IRRALNLG--VNVKMITGDQL 520 (954)
Q Consensus 502 I~~l~~aG--I~v~miTGD~~ 520 (954)
=++|++.| +.|..+|||+.
T Consensus 57 ydeL~~~GedveVA~VsG~~~ 77 (344)
T PF04123_consen 57 YDELKAEGEDVEVAVVSGSPD 77 (344)
T ss_pred HHHHHhcCCCeEEEEEECCCC
Confidence 34566556 77999999985
No 223
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=32.65 E-value=2.3e+02 Score=28.73 Aligned_cols=106 Identities=17% Similarity=0.134 Sum_probs=66.5
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHH-HHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHH
Q 002203 497 DSAETIRRALNLGVNVKMITGDQLAI-GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (954)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~t-A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~ 575 (954)
|.-+++.++++.|-++-+++=.+..- ...+.+-+|+. ...+.=-+|++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 55666666666666777666555432 45555555542 2234455678888
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHH-HhccCEEEcCCCchhHHHHHHHhHHHHHHHHH
Q 002203 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA-RSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649 (954)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A-~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~ 649 (954)
..++.+++.|. -+.+|++. ..+.| +.--..++.+.+-.+|..|+.+++++++..++
T Consensus 116 ~~i~~~~~~G~-~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGV-DVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-cEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 88999998884 45677652 12222 33455788888899999999999999887664
No 224
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=31.82 E-value=1e+02 Score=34.22 Aligned_cols=104 Identities=24% Similarity=0.323 Sum_probs=60.6
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH-hCCCCCCCCCCccc--CcccccccCcccHHHHhhhcc
Q 002203 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLL--GQDKDASIAALPVDELIEKAD 564 (954)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~l~--g~~~~~~~~~~~~~~~~~~~~ 564 (954)
+.+-|.||+ .+.|+++|++|.+|+++|--...-|...+.. .|+ ..+. |...+.-+....+. +-.-+
T Consensus 161 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~v-------D~~~GiGGaPEGVlaAaAlk--clGG~ 229 (319)
T PRK09479 161 VVVLDRPRH--EELIAEIREAGARVKLISDGDVAGAIATAFPDTGV-------DILMGIGGAPEGVLAAAALK--CLGGE 229 (319)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCe-------eEEEEcCcChHHHHHHHHHH--hcCce
Confidence 456688888 4899999999999999996555556655521 111 1111 11111111111111 11234
Q ss_pred eEEecChhhHHHHHHHHhh---------------CCCEEEEECCCccCHHhhh
Q 002203 565 GFAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALK 602 (954)
Q Consensus 565 vfarvsP~qK~~iV~~lq~---------------~g~~V~m~GDG~NDapALk 602 (954)
+.+|.-|....+.-++.+. +|.-|.++.-|+.|...|+
T Consensus 230 mqgRL~~~~~~e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 230 MQGRLLPRNEEERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred eEEeECCCCHHHHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 6778877665554333321 1347889999999999887
No 225
>PLN02591 tryptophan synthase
Probab=31.10 E-value=2.1e+02 Score=30.95 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHhCCCE-EEEEccCCh-HHHHHHHHHhC-CCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChh
Q 002203 496 HDSAETIRRALNLGVN-VKMITGDQL-AIGKETGRRLG-MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (954)
Q Consensus 496 ~~~~~~I~~l~~aGI~-v~miTGD~~-~tA~~ia~~lG-i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~ 572 (954)
++..+..+.|++.|+. |.++|-... +..+.++.... .. ......-++|.. .-.|+
T Consensus 118 ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFI-Y~Vs~~GvTG~~---------------------~~~~~ 175 (250)
T PLN02591 118 EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFV-YLVSSTGVTGAR---------------------ASVSG 175 (250)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcE-EEeeCCCCcCCC---------------------cCCch
Confidence 6677777777777776 444444442 34555555532 11 000011111211 01255
Q ss_pred hHHHHHHHHhhCCCEEEEECCCccCH
Q 002203 573 HKYEIVKRLQERKHICGMTGDGVNDA 598 (954)
Q Consensus 573 qK~~iV~~lq~~g~~V~m~GDG~NDa 598 (954)
+=.+.++.+++....-.++|=|+++.
T Consensus 176 ~~~~~i~~vk~~~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 176 RVESLLQELKEVTDKPVAVGFGISKP 201 (250)
T ss_pred hHHHHHHHHHhcCCCceEEeCCCCCH
Confidence 55677888887655666789998843
No 226
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=30.77 E-value=57 Score=29.87 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=25.3
Q ss_pred eEEEEeCCeEEEEecCCcCCCcEEEEeCCCee
Q 002203 136 KTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (954)
Q Consensus 136 ~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd~V 167 (954)
.-+|.-||+.. -|++++++||+|.|.-|...
T Consensus 33 ~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 33 GGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 44677788866 89999999999999988654
No 227
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=29.60 E-value=26 Score=35.47 Aligned_cols=16 Identities=31% Similarity=0.194 Sum_probs=13.5
Q ss_pred EEeCCCCccccCceee
Q 002203 331 LCSDKTGTLTLNKLTV 346 (954)
Q Consensus 331 I~~DKTGTLT~n~m~v 346 (954)
+|||.+||||.+.+.+
T Consensus 1 v~fD~DGTL~~~~~~f 16 (192)
T PF12710_consen 1 VIFDFDGTLTDSDSGF 16 (192)
T ss_dssp EEEESBTTTBSSHHHH
T ss_pred eEEecCcCeecCCCch
Confidence 6999999999998433
No 228
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.49 E-value=2e+02 Score=31.92 Aligned_cols=138 Identities=14% Similarity=0.204 Sum_probs=75.2
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCCCCCCCC-------------------
Q 002203 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYPSS------------------- 540 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~~------------------- 540 (954)
+.++++++.++-++.+++. |++ +.++.||+++.. ...|+++||....+.-.
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDP 88 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888877 665 466778887544 45677788854221100
Q ss_pred cccC----ccccc------------------ccCcccHHHHhhhc--ceEEecChhhHHHHHHHHhh--CCCEEEEECCC
Q 002203 541 SLLG----QDKDA------------------SIAALPVDELIEKA--DGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG 594 (954)
Q Consensus 541 ~l~g----~~~~~------------------~~~~~~~~~~~~~~--~vfarvsP~qK~~iV~~lq~--~g~~V~m~GDG 594 (954)
.+.| .+... .++...+..+...- ..|.-+||.-=.++++..+- .|..|+++|.+
T Consensus 89 ~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS 168 (295)
T PRK14174 89 DVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRS 168 (295)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 0000 00000 11111222222221 33555777766666665542 48999999998
Q ss_pred ccC----HHhhh------hCCeeEEeccchH--HHHhccCEEEcC
Q 002203 595 VND----APALK------KADIGIAVADATD--AARSASDIVLTE 627 (954)
Q Consensus 595 ~ND----apALk------~AdVGIamg~gtd--~A~~aADivL~~ 627 (954)
..= +-+|. .|.|-+.-....+ ..-..||+++..
T Consensus 169 ~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 169 NIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred CcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 541 22443 3566666553332 234589999864
No 229
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=29.33 E-value=3.8e+02 Score=24.93 Aligned_cols=45 Identities=11% Similarity=0.231 Sum_probs=23.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Q 002203 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR 141 (954)
Q Consensus 97 ~~~~~~~I~~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R 141 (954)
.|...+++++++++.-.+-+...+|.++..+++.+.+.+-.+|+-
T Consensus 17 ~~~~ll~lvii~~i~yf~~~RpqkK~~k~~~~~~~~Lk~Gd~VvT 61 (106)
T PRK05585 17 GLSSLLPLVVFFAIFYFLIIRPQQKRQKEHKKMLSSLAKGDEVVT 61 (106)
T ss_pred cHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 344444333333333333344455666666777766666666654
No 230
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.30 E-value=1.7e+02 Score=32.31 Aligned_cols=139 Identities=16% Similarity=0.129 Sum_probs=74.2
Q ss_pred cCCCCCccHHHHHHHHHhCCCEE---EEEccCChHHH------HHHHHHhCCCCCCCCCC-------------------c
Q 002203 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGTNMYPSS-------------------S 541 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~~-------------------~ 541 (954)
+.+.+|++.++-|+.+++.|++. .++-||+++.. ...|+++|+....+.-. .
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPK 90 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 44567788888888888777653 55568876544 45667778754221100 0
Q ss_pred ccC----cccccc------------------cCcccHHHHhhhcceEEecChhhHHHHHHHHh--hCCCEEEEECCCcc-
Q 002203 542 LLG----QDKDAS------------------IAALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ERKHICGMTGDGVN- 596 (954)
Q Consensus 542 l~g----~~~~~~------------------~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq--~~g~~V~m~GDG~N- 596 (954)
+.| .+.... ++...+..+...-..|.-+||.-=.++++..+ -.|..|.++|-|..
T Consensus 91 V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iV 170 (285)
T PRK14189 91 IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIV 170 (285)
T ss_pred CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 000 000001 11112222222223455667766555555554 24899999999865
Q ss_pred ---CHHhhhhCCeeEEe--ccchH--HHHhccCEEEcCC
Q 002203 597 ---DAPALKKADIGIAV--ADATD--AARSASDIVLTEP 628 (954)
Q Consensus 597 ---DapALk~AdVGIam--g~gtd--~A~~aADivL~~~ 628 (954)
=+.+|.+.+.-+.+ ....+ ..-..|||++.-=
T Consensus 171 GkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~av 209 (285)
T PRK14189 171 GKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAV 209 (285)
T ss_pred HHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcC
Confidence 23455555555544 32222 2335899998653
No 231
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=29.05 E-value=91 Score=34.57 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=26.7
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHH-HHHHHHhCC
Q 002203 496 HDSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGM 532 (954)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA-~~ia~~lGi 532 (954)
+|+...-+.|+..|.+++++|......+ ++..+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 4666777889999999999998765443 345555555
No 232
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.95 E-value=2.1e+02 Score=31.60 Aligned_cols=138 Identities=12% Similarity=0.138 Sum_probs=76.3
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCCCCCC--CC-----------------
Q 002203 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYP--SS----------------- 540 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~--~~----------------- 540 (954)
+...+|++.++.|+.+++. |++ ..++.||+++.. ...|+++||....+. ..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 88 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARP 88 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456678888888888876 775 456678887644 456777888543211 00
Q ss_pred cccC----ccccc------------------ccCcccHHHHhhhcceEEecChhhHHHHHHHHhh--CCCEEEEECCCcc
Q 002203 541 SLLG----QDKDA------------------SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN 596 (954)
Q Consensus 541 ~l~g----~~~~~------------------~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~--~g~~V~m~GDG~N 596 (954)
.+.| .+... .++...+..+...-..|.-+||.-=.++++..+- .|..|.++|-+..
T Consensus 89 ~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~i 168 (286)
T PRK14184 89 DIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNI 168 (286)
T ss_pred cCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0000 00000 0111122222222234566777766666665542 3899999999854
Q ss_pred ----CHHhhhh------CCeeEEeccchH--HHHhccCEEEcC
Q 002203 597 ----DAPALKK------ADIGIAVADATD--AARSASDIVLTE 627 (954)
Q Consensus 597 ----DapALk~------AdVGIamg~gtd--~A~~aADivL~~ 627 (954)
=+-+|.+ |.|-+.-....+ ..-..||+++..
T Consensus 169 VG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 169 VGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred chHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 2234544 666666553333 234589999854
No 233
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=28.62 E-value=1.3e+02 Score=33.34 Aligned_cols=105 Identities=21% Similarity=0.302 Sum_probs=58.9
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc--CcccccccCcccHHHHhhhcce
Q 002203 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL--GQDKDASIAALPVDELIEKADG 565 (954)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~--g~~~~~~~~~~~~~~~~~~~~v 565 (954)
+.+-|.||+ .+.|+++|++|.+|++++--...-|...+. ... ....+. |...+.-++...+. +-.-.+
T Consensus 158 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDV~~ai~~~~----~~s--~vD~~~GiGGaPEGVlaAaAlk--clGG~~ 227 (309)
T cd01516 158 VVVLDRPRH--AALIEEIREAGARIKLIPDGDVAAAIATAL----PGS--GVDVLMGIGGAPEGVLAAAALK--CLGGEM 227 (309)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhC----CCC--CeeEEEECCCChHHHHHHHHHH--hCCcee
Confidence 456688887 589999999999999998655555555442 211 111111 11111111111111 112246
Q ss_pred EEecChhhHHHHHHHHhh---------------CCCEEEEECCCccCHHhhh
Q 002203 566 FAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALK 602 (954)
Q Consensus 566 farvsP~qK~~iV~~lq~---------------~g~~V~m~GDG~NDapALk 602 (954)
.+|.-|....+.-++.+. +|.-|.++.-|+.|...|+
T Consensus 228 qgrL~~~~~~e~~r~~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~ 279 (309)
T cd01516 228 QGRLLPRNEEERARAREMGITDPNKILTLDDLVRGDDVVFAATGITDGELLK 279 (309)
T ss_pred EEEECCCCHHHHHHHHHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccC
Confidence 777777655444333321 2456888888999988887
No 234
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=28.34 E-value=2.4e+02 Score=30.35 Aligned_cols=102 Identities=22% Similarity=0.318 Sum_probs=59.3
Q ss_pred EEEeccCCCCCc---------cHHHHHHHHHhC-CCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcc
Q 002203 485 VGLLPLFDPPRH---------DSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (954)
Q Consensus 485 lGli~i~D~lr~---------~~~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 554 (954)
++.+.+..|.+. +..++++.+.+. +++++++||..... . .|.+
T Consensus 15 v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~F--s----aG~D--------------------- 67 (257)
T COG1024 15 IAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAF--S----AGAD--------------------- 67 (257)
T ss_pred EEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCce--e----cccC---------------------
Confidence 778888877764 556667777765 89999999987321 1 1111
Q ss_pred cHHHHhh-hcceEEecChhhHHHHHHHHhhC-CCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCC
Q 002203 555 PVDELIE-KADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (954)
Q Consensus 555 ~~~~~~~-~~~vfarvsP~qK~~iV~~lq~~-g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~ 629 (954)
+..+.. ......+..-.+-..+.+.+... ..+|+++= |.++|.|.+.+- +||+++..++
T Consensus 68 -l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~--------------G~a~GgG~eLal-~~D~ria~~~ 128 (257)
T COG1024 68 -LKELLSPEDGNAAENLMQPGQDLLRALADLPKPVIAAVN--------------GYALGGGLELAL-ACDIRIAAED 128 (257)
T ss_pred -HHHHhcccchhHHHHHHhHHHHHHHHHHhCCCCEEEEEc--------------ceEeechhhhhh-cCCeEEecCC
Confidence 111100 00000000011223456666664 55665542 689999999998 9999998754
No 235
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=27.16 E-value=1.6e+02 Score=29.74 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=41.8
Q ss_pred CChhHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCC
Q 002203 440 CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 519 (954)
Q Consensus 440 ~~~~~~~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~ 519 (954)
++.....-+..+++.++..|=-.++++... + -+.+-.+++.+++.|++|+-+||.+
T Consensus 91 NDy~yd~vFsRqveA~g~~GDvLigISTSG----------------------N--S~nVl~Ai~~Ak~~gm~vI~ltG~~ 146 (176)
T COG0279 91 NDYGYDEVFSRQVEALGQPGDVLIGISTSG----------------------N--SKNVLKAIEAAKEKGMTVIALTGKD 146 (176)
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEeCCC----------------------C--CHHHHHHHHHHHHcCCEEEEEecCC
Confidence 344445566677788888775555555432 1 2588999999999999999999987
Q ss_pred hH
Q 002203 520 LA 521 (954)
Q Consensus 520 ~~ 521 (954)
-.
T Consensus 147 GG 148 (176)
T COG0279 147 GG 148 (176)
T ss_pred Cc
Confidence 43
No 236
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=26.93 E-value=7.3e+02 Score=25.77 Aligned_cols=6 Identities=33% Similarity=0.512 Sum_probs=2.5
Q ss_pred ChhHHH
Q 002203 787 RPGLLL 792 (954)
Q Consensus 787 ~~~~~l 792 (954)
++++|.
T Consensus 143 r~~~~k 148 (206)
T PF06570_consen 143 RPSWWK 148 (206)
T ss_pred ccHHHH
Confidence 444443
No 237
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=26.91 E-value=1e+02 Score=31.20 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=31.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEc-cCChHHHHHHHHHhCCC
Q 002203 494 PRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 533 (954)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miT-GD~~~tA~~ia~~lGi~ 533 (954)
+-||+++.++.|++.|+++.+.| -|.+..|+++=+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 46899999999999999999999 58899999999999986
No 238
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=26.57 E-value=2e+02 Score=32.31 Aligned_cols=49 Identities=18% Similarity=0.163 Sum_probs=38.7
Q ss_pred EEEeccCCCCCccHHHHHHHHHhC----CCEEEEEccCChH----HHHHHHHHhCCC
Q 002203 485 VGLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQLA----IGKETGRRLGMG 533 (954)
Q Consensus 485 lGli~i~D~lr~~~~~~I~~l~~a----GI~v~miTGD~~~----tA~~ia~~lGi~ 533 (954)
=|++.-.+++-+++.++++.|+.. |+++..+|-..-. .+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 477778889999999999999998 9999999966522 345555667763
No 239
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=26.32 E-value=1.4e+02 Score=33.23 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=59.3
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc--CcccccccCcccHHHHhhhcce
Q 002203 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL--GQDKDASIAALPVDELIEKADG 565 (954)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~--g~~~~~~~~~~~~~~~~~~~~v 565 (954)
+.+-|.||+ .+.|+++|++|.+|++++--...-|...+. ... ....+. |...+.-++...+. +..-.+
T Consensus 159 V~vLdRpRH--~~lI~eir~~Gari~Li~DGDV~~ai~~~~----~~~--~vD~~~GiGGaPEGVlaAaAlk--clGG~~ 228 (322)
T PRK12415 159 VIVQERERH--QDIIDRVRAKGARVKLFGDGDVGASIATAL----PGT--GIDLFVGIGGAPEGVISAAALK--CLGGEM 228 (322)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhC----CCC--CeeEEEEcCCChHHHHHHHHHH--hCCcee
Confidence 456688887 489999999999999998655555554442 211 111111 11111111111110 112246
Q ss_pred EEecChhhHHHHHHHHhh---------------CCCEEEEECCCccCHHhhh
Q 002203 566 FAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALK 602 (954)
Q Consensus 566 farvsP~qK~~iV~~lq~---------------~g~~V~m~GDG~NDapALk 602 (954)
.+|..|....+.-++.+. +|.-|.++.-|+.|-..|+
T Consensus 229 q~rL~~~~~~e~~r~~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~ 280 (322)
T PRK12415 229 QARLVPMNEEEEARCREMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLD 280 (322)
T ss_pred EEEECCCCHHHHHHHHHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcC
Confidence 777776655444333321 2557888889999999887
No 240
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=26.30 E-value=1.5e+02 Score=25.13 Aligned_cols=33 Identities=18% Similarity=0.071 Sum_probs=24.7
Q ss_pred CCeEEEEeCCeEEEEec---CCcCCCcEEEEeCCCe
Q 002203 134 APKTKVLRDGRWSEQDA---SILVPGDVISIKLGDI 166 (954)
Q Consensus 134 ~~~~~V~Rdg~~~~I~~---~~Lv~GDIV~l~~Gd~ 166 (954)
...+.|-.+|..++++. .++.|||.|.+..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 45788888999999864 4578999999999843
No 241
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=26.18 E-value=5.6e+02 Score=24.21 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=29.4
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEECCCcc--CHHhhhhCCeeEEec
Q 002203 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVA 611 (954)
Q Consensus 566 farvsP~qK~~iV~~lq~~g~~V~m~GDG~N--DapALk~AdVGIamg 611 (954)
+++..+.=-.++++.+. +=..+...|-|+| |..++++-+|-++=.
T Consensus 43 i~~~~~~~~~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 43 IVGSGTPLTAEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EESTTSTBSHHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEcCCCCcCHHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 34444422345566663 3357889999998 889999999988874
No 242
>PF15584 Imm44: Immunity protein 44
Probab=25.78 E-value=33 Score=30.68 Aligned_cols=20 Identities=30% Similarity=0.373 Sum_probs=16.4
Q ss_pred CCcEEEEeCCCeeccceEEe
Q 002203 155 PGDVISIKLGDIVPADARLL 174 (954)
Q Consensus 155 ~GDIV~l~~Gd~VPaD~~ll 174 (954)
+.+-..|+.|+.|||||+-=
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45567889999999999873
No 243
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=25.58 E-value=1.5e+02 Score=33.33 Aligned_cols=57 Identities=30% Similarity=0.445 Sum_probs=38.8
Q ss_pred HHHHHHhhCCCEEEEECCCc--------------------cCHHhhhhC--CeeEEec-c---chHHHHh--ccCEEEcC
Q 002203 576 EIVKRLQERKHICGMTGDGV--------------------NDAPALKKA--DIGIAVA-D---ATDAARS--ASDIVLTE 627 (954)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~--------------------NDapALk~A--dVGIamg-~---gtd~A~~--aADivL~~ 627 (954)
.+++.|+++|..|+.+.=|. .|-|+|=+- ++.+.++ + +...+.+ .+|++|+|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 56778888898888884331 377766433 6777776 2 3344433 58999999
Q ss_pred CCchh
Q 002203 628 PGLSV 632 (954)
Q Consensus 628 ~~~~~ 632 (954)
|+|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 99864
No 244
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=24.80 E-value=6.4e+02 Score=30.62 Aligned_cols=102 Identities=15% Similarity=0.110 Sum_probs=64.8
Q ss_pred cHHHHHHHHHhCCCEEEEEccCCh-HHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhcceEEecChhhHH
Q 002203 497 DSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (954)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~-~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfarvsP~qK~ 575 (954)
|+-.+++.+++.+=++.+++=.+. ..+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 577778888877778888876664 3455566666552 2357778889999
Q ss_pred HHHHHHhhCCCEEEEECCCccCHHhhhhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHH
Q 002203 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 645 (954)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~NDapALk~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~ 645 (954)
..|+.++++|..| ++||++- ++.|+++-=--+...+-.+|..++.......+
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~-----------------~~~A~~~g~~g~~~~s~e~i~~a~~~A~~~~~ 197 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI-----------------TDLAEEAGMTGIFIYSAATVRQAFEDALDMTR 197 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH-----------------HHHHHHhCCceEEecCHHHHHHHHHHHHHHHH
Confidence 9999999999655 6788743 23333322111222234677777776655443
No 245
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=24.31 E-value=1.1e+02 Score=30.53 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=37.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002203 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (954)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (954)
.=.+||++.+.+++|++. +++.+.|.-....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345799999999999955 999999999999999999999864
No 246
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.81 E-value=1.2e+02 Score=33.40 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=33.0
Q ss_pred cCCCCCccHHHHHHHHHhCCCEE---EEEccCChHHH------HHHHHHhCCCC
Q 002203 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~ 534 (954)
+.+.++++.++.++.+++.|++. .++-||+++.. ...|+++|+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667888899999998888764 55679887654 35677888854
No 247
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.23 E-value=1.4e+02 Score=32.92 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=75.9
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCCCCCCC--C-----------------c
Q 002203 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGTNMYPS--S-----------------S 541 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~--~-----------------~ 541 (954)
+.++++++.++.++.+++.|++ +.++-||+++.. ...|+++|+....+.- . .
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 88 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPD 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778889999999888876 466778887654 3567788885422111 0 0
Q ss_pred ccC----ccccc------------------ccCcccHHHHhhhcceEEecChhhHHHHHHHHhh--CCCEEEEECCCcc-
Q 002203 542 LLG----QDKDA------------------SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN- 596 (954)
Q Consensus 542 l~g----~~~~~------------------~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~--~g~~V~m~GDG~N- 596 (954)
+.| .+... .++...+..+......|.-+||.-=.++++...- .|..|.++|.+..
T Consensus 89 V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 168 (282)
T PRK14169 89 VDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIV 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 000 00000 1111122222222233556677766666666542 4899999999854
Q ss_pred ---CHHhhhhCCeeEEe--ccchH--HHHhccCEEEcC
Q 002203 597 ---DAPALKKADIGIAV--ADATD--AARSASDIVLTE 627 (954)
Q Consensus 597 ---DapALk~AdVGIam--g~gtd--~A~~aADivL~~ 627 (954)
=+.+|...+.-+.+ +...+ ..-..|||++.-
T Consensus 169 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 169 GRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred hHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 23455555555544 32222 223478999864
No 248
>TIGR00330 glpX fructose-1,6-bisphosphatase, class II. In E. coli, GlpX is found in the glpFKX operon together with a glycerol update protein and glycerol kinase.
Probab=23.16 E-value=1.9e+02 Score=32.04 Aligned_cols=38 Identities=29% Similarity=0.390 Sum_probs=29.0
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH
Q 002203 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 527 (954)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 527 (954)
+.+-|.||+ .+.|+++|++|.+|+++|--...-|...+
T Consensus 158 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~ 195 (321)
T TIGR00330 158 VTILAKPRH--DAVIAEMQQLGVRVFAIPDGDVAASILTC 195 (321)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh
Confidence 456688887 58999999999999999965555454444
No 249
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=22.47 E-value=1.2e+02 Score=32.43 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=31.5
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH
Q 002203 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (954)
Q Consensus 486 Gli~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 528 (954)
|++.-.+.+=+++.++|+.+++.|++++++|.....+...+++
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~ 49 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAE 49 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHH
Confidence 4555556667799999999999999999999555433333333
No 250
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.38 E-value=1.4e+02 Score=32.92 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=33.8
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002203 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~ 534 (954)
+.+.++++.++-|+.+++.|++ +.++.||+++.. ...|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788899999999888876 566779987654 45677889854
No 251
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=22.23 E-value=5e+02 Score=23.03 Aligned_cols=24 Identities=25% Similarity=0.307 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEe
Q 002203 118 EENNAGNAAAALMANLAPKTKVLR 141 (954)
Q Consensus 118 ~e~~a~~~~~~l~~~~~~~~~V~R 141 (954)
..+|+++..+++.+.+.+--+|.-
T Consensus 23 pqkK~~k~~~~m~~~L~~Gd~VvT 46 (84)
T TIGR00739 23 PQRKRRKAHKKLIESLKKGDKVLT 46 (84)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEE
Confidence 345555555566666655555554
No 252
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=22.12 E-value=3.5 Score=49.09 Aligned_cols=178 Identities=11% Similarity=0.010 Sum_probs=111.1
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEc------------------------cCCh--HHHH--HHHHHhCCCC
Q 002203 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT------------------------GDQL--AIGK--ETGRRLGMGT 534 (954)
Q Consensus 483 ~~lGli~i~D~lr~~~~~~I~~l~~aGI~v~miT------------------------GD~~--~tA~--~ia~~lGi~~ 534 (954)
..+-+.--.+++++.+.++|+++.+.|.|-.=+. =|.+ .+|. ..|..+|...
T Consensus 432 qil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~V 511 (942)
T KOG0205|consen 432 QILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNV 511 (942)
T ss_pred HHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhcccee
Confidence 3445666788999999999999988887632211 1221 2333 3344444432
Q ss_pred CCCCCCcc-----cCcc--------cccccCcccHHHHhhhcceEEecChhhHHHHHHHHhhCCCEEEEECCCccCHHhh
Q 002203 535 NMYPSSSL-----LGQD--------KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (954)
Q Consensus 535 ~~~~~~~l-----~g~~--------~~~~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~~g~~V~m~GDG~NDapAL 601 (954)
.+...+.+ +|.. ....+-+...++-++...++.-+.|.|+..-|--.++.+.+..+.++|.++++-.
T Consensus 512 kmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtg 591 (942)
T KOG0205|consen 512 KMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTG 591 (942)
T ss_pred eeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccC
Confidence 22221111 0000 0011223333444555667777888899988888888888899999999999988
Q ss_pred hhCCeeEEeccchHHHHhccCEEEcCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 002203 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (954)
Q Consensus 602 k~AdVGIamg~gtd~A~~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~ 660 (954)
..+|=+.|+..+.....-+.+..-.....+-++.+-..|+.+...+....+|.-.+|..
T Consensus 592 dgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmknyt 650 (942)
T KOG0205|consen 592 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (942)
T ss_pred CCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhhe
Confidence 88888888754433333233333344445555566678999999999988898877763
No 253
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=21.93 E-value=1.5e+02 Score=36.52 Aligned_cols=67 Identities=25% Similarity=0.313 Sum_probs=44.0
Q ss_pred EecCCcCCCcEEEE-eCCCeecc-ceEEeecCceEEEeecccCCCcceecCCCCcccccceeecCeEEEEEEEecc-hhH
Q 002203 148 QDASILVPGDVISI-KLGDIVPA-DARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV-HTF 224 (954)
Q Consensus 148 I~~~~Lv~GDIV~l-~~Gd~VPa-D~~ll~g~~~~VdeS~LTGEs~pv~K~~~~~v~~Gs~v~~G~~~~~V~~tG~-~T~ 224 (954)
|.-.||.+||-|.| ++||+||- ++++.+- =+|+..|.. -|...-..||.+...+..+..-+++. .|.
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~---------R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~~C~ 432 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEK---------RPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGLNCP 432 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeeccc---------CCCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCCCCh
Confidence 44689999999999 69999995 3333332 244555543 44445577888888666666666773 443
No 254
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.64 E-value=3.3e+02 Score=30.03 Aligned_cols=64 Identities=19% Similarity=0.272 Sum_probs=39.2
Q ss_pred ceEEecChhhHHHHHHHHhh--CCCEEEEECCC-ccCHH---hhhhC--CeeEEeccchH--HHHhccCEEEcC
Q 002203 564 DGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG-VNDAP---ALKKA--DIGIAVADATD--AARSASDIVLTE 627 (954)
Q Consensus 564 ~vfarvsP~qK~~iV~~lq~--~g~~V~m~GDG-~NDap---ALk~A--dVGIamg~gtd--~A~~aADivL~~ 627 (954)
..|.-+||.-=.++++...- .|..|..+|-+ .-=-| +|... .|-+.-....+ ..-..||+++.-
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 34566777766666666543 48999999999 44455 66544 44444443222 223479999854
No 255
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=21.27 E-value=5.5e+02 Score=27.85 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=27.0
Q ss_pred HhCCCEEEEEccCCh-------HHHHHHHHHhCCCCCCCC
Q 002203 506 LNLGVNVKMITGDQL-------AIGKETGRRLGMGTNMYP 538 (954)
Q Consensus 506 ~~aGI~v~miTGD~~-------~tA~~ia~~lGi~~~~~~ 538 (954)
..+|-+|.-+|=|.+ +.|..+|+++|+.....+
T Consensus 39 ~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~ 78 (269)
T COG1606 39 EALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIK 78 (269)
T ss_pred HHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeee
Confidence 567889999999974 689999999999765443
No 256
>PRK04980 hypothetical protein; Provisional
Probab=20.96 E-value=1.4e+02 Score=27.58 Aligned_cols=66 Identities=26% Similarity=0.395 Sum_probs=44.4
Q ss_pred CCeEEEEeCCeEEEEecCCcCCCcEEEEe--CCCeeccceEEeecCceEEEe-----ecccCCCcceecCCCCccccc
Q 002203 134 APKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQ-----SALTGESLPVTKNPYDEVFSG 204 (954)
Q Consensus 134 ~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~--~Gd~VPaD~~ll~g~~~~Vde-----S~LTGEs~pv~K~~~~~v~~G 204 (954)
..++.-+||+. ....+|||++.|. .++..-|+..+++-.....|| +...|+|.+.-|..-..+|-|
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk~~i~~iYp~ 90 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELKQVIAEIYPN 90 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHHHHHHHHCCC
Confidence 45566678853 3678999999997 888999999999765444444 455677766555433333333
No 257
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.84 E-value=1.5e+02 Score=32.69 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=72.9
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCCCCCCC--C-----------------
Q 002203 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYPS--S----------------- 540 (954)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~--~----------------- 540 (954)
+.++++++.++-|+.+++. |++ ..++-||+++.. ...|+++||....+.- .
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQ 88 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4456778888888888855 665 455678887554 4567778885422110 0
Q ss_pred cccC----ccccc------------------ccCcccHHHHhhhcceEEecChhhHHHHHHHHhh--CCCEEEEECCCcc
Q 002203 541 SLLG----QDKDA------------------SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN 596 (954)
Q Consensus 541 ~l~g----~~~~~------------------~~~~~~~~~~~~~~~vfarvsP~qK~~iV~~lq~--~g~~V~m~GDG~N 596 (954)
.+.| .+... .++...+.++...-..|.-+||.-=.++++..+- .|..|+++|.|..
T Consensus 89 ~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~ 168 (285)
T PRK14191 89 NIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNI 168 (285)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCch
Confidence 0000 00000 1111122222222234556777776677666653 3899999999922
Q ss_pred ----CHHhhhh--CCeeEEeccchHH--HHhccCEEEcC
Q 002203 597 ----DAPALKK--ADIGIAVADATDA--ARSASDIVLTE 627 (954)
Q Consensus 597 ----DapALk~--AdVGIamg~gtd~--A~~aADivL~~ 627 (954)
=+-+|.. |.|-+.-+...+. .-..||+++..
T Consensus 169 VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 169 VGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred hHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 2234433 4444433322222 23478888754
No 258
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=20.70 E-value=62 Score=26.10 Aligned_cols=12 Identities=42% Similarity=0.675 Sum_probs=10.2
Q ss_pred CCCcEEEEeCCC
Q 002203 154 VPGDVISIKLGD 165 (954)
Q Consensus 154 v~GDIV~l~~Gd 165 (954)
.+||+|+||.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999884
No 259
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=20.42 E-value=63 Score=34.54 Aligned_cols=91 Identities=18% Similarity=0.154 Sum_probs=48.6
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcccHHHHhhhc--c--eEEecC
Q 002203 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA--D--GFAGVF 570 (954)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--~--vfarvs 570 (954)
-++..++++.|++.|++. ++|......+.......|.. .+...++.. + ....-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 378889999998899997 67775544333222222211 111111100 0 011112
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCC-ccCHHhhhhCCee
Q 002203 571 PEHKYEIVKRLQER-KHICGMTGDG-VNDAPALKKADIG 607 (954)
Q Consensus 571 P~qK~~iV~~lq~~-g~~V~m~GDG-~NDapALk~AdVG 607 (954)
|+-=..+.+.+... ...+.|+||. .+|..+=+.|++-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 22112333344322 2469999999 5999988888764
No 260
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=20.34 E-value=1.5e+02 Score=27.83 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=27.4
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCC
Q 002203 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (954)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 532 (954)
-+++.++++.+++.|++++.+|++.. . ...+.+-|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~-l-~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK-L-LEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch-H-HHHHHHcCC
Confidence 36889999999999999999999874 2 234554443
No 261
>PRK12821 aspartyl/glutamyl-tRNA amidotransferase subunit C-like protein; Provisional
Probab=20.28 E-value=1.4e+03 Score=26.82 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=13.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHH
Q 002203 706 PDSWKLKEIFATGVVLGSYLAIMTV 730 (954)
Q Consensus 706 p~~~~~~~~~~~~~~~g~~~~~~~~ 730 (954)
|...+..+.+-.++++|+.+.++.+
T Consensus 214 ~~~~~is~~~~~~i~~~f~~~~i~~ 238 (477)
T PRK12821 214 SQTFKISLVVYTWIILYFGIGIIIF 238 (477)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHH
Confidence 3334455545555566776665555
No 262
>PRK10234 DNA-binding transcriptional activator GutM; Provisional
Probab=20.14 E-value=6.4e+02 Score=24.01 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCeEEEEecCCcCCCcEEEEeCCC-eeccceEEeec
Q 002203 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGD-IVPADARLLEG 176 (954)
Q Consensus 106 ~~~~i~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDIV~l~~Gd-~VPaD~~ll~g 176 (954)
++.++..+++++|-++-.+..++|.+.- ++-+=|.+ .-+.||-||.+-.++ -.-.|+.+++|
T Consensus 11 ~a~llQ~~lg~~Qik~Fn~~~~~L~~~G--~V~iGr~~-------grf~~g~IvllaiD~~~~I~d~~~M~G 73 (118)
T PRK10234 11 IAWCAQLALGGWQISRFNRAFDTLCQQG--RVGVGRSS-------GRFKPRVVVALALDEQQRVVDTLFMKG 73 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC--ceEEeccc-------CccCCCeEEEEEECCCCcEEeeEEEcc
Confidence 4456778889999999999999887742 34343332 256889988775443 23345555554
No 263
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=20.05 E-value=1.5e+02 Score=29.91 Aligned_cols=82 Identities=21% Similarity=0.302 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCE---EEEEccCChHH
Q 002203 446 KKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAI 522 (954)
Q Consensus 446 ~~~~~~i~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~~lGli~i~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~t 522 (954)
+++.+-++++...|.+++.++-.. + .-...=..-+|+=.+.---+|-...-=+.|++.++. |+|+ ||+.-|
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~--e---~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~T 122 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNK--E---SRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFT 122 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCC--H---HHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhh
Confidence 344556778889999999887432 1 000100122344444455566666666677777774 7887 999999
Q ss_pred HHHHHHHhCCC
Q 002203 523 GKETGRRLGMG 533 (954)
Q Consensus 523 A~~ia~~lGi~ 533 (954)
=.--|++.|+-
T Consensus 123 DVlggnr~G~~ 133 (175)
T COG2179 123 DVLGGNRAGMR 133 (175)
T ss_pred hhhcccccCcE
Confidence 99999999984
Done!