Query 002206
Match_columns 953
No_of_seqs 500 out of 3224
Neff 8.0
Searched_HMMs 46136
Date Thu Mar 28 18:55:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002206.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002206hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0153 GalK Galactokinase [Ca 100.0 1.1E-70 2.4E-75 591.0 27.7 353 480-948 6-361 (390)
2 PLN02865 galactokinase 100.0 1.7E-63 3.7E-68 561.2 30.4 361 482-946 14-386 (423)
3 PTZ00290 galactokinase; Provis 100.0 1E-62 2.2E-67 559.6 31.8 356 481-944 16-424 (468)
4 PLN02521 galactokinase 100.0 1E-60 2.2E-65 551.0 31.2 390 482-941 34-449 (497)
5 PRK05322 galactokinase; Provis 100.0 1.5E-58 3.2E-63 524.3 32.5 345 483-942 6-352 (387)
6 PRK05101 galactokinase; Provis 100.0 1.9E-57 4E-62 515.0 30.4 339 482-941 6-346 (382)
7 TIGR00131 gal_kin galactokinas 100.0 1.2E-56 2.5E-61 511.7 30.1 342 484-941 5-350 (386)
8 PRK00555 galactokinase; Provis 100.0 5.6E-56 1.2E-60 499.1 27.8 321 498-942 3-327 (363)
9 PRK03817 galactokinase; Provis 100.0 9.9E-48 2.2E-52 433.5 29.3 312 499-941 2-314 (351)
10 KOG0631 Galactokinase [Carbohy 100.0 6.4E-48 1.4E-52 420.6 20.7 387 482-940 25-443 (489)
11 PLN02677 mevalonate kinase 100.0 1.3E-42 2.8E-47 388.9 25.2 305 498-941 3-348 (387)
12 COG1577 ERG12 Mevalonate kinas 100.0 7.6E-42 1.6E-46 367.6 24.6 280 499-941 2-281 (307)
13 TIGR00549 mevalon_kin mevalona 100.0 8.1E-42 1.8E-46 373.4 23.7 273 502-938 1-273 (273)
14 KOG1511 Mevalonate kinase MVK/ 100.0 6.3E-41 1.4E-45 349.7 20.1 307 498-941 5-346 (397)
15 TIGR01220 Pmev_kin_Gr_pos phos 100.0 7.6E-40 1.7E-44 368.1 27.0 294 499-942 2-332 (358)
16 PRK13412 fkp bifunctional fuco 100.0 6.2E-39 1.3E-43 386.3 23.1 302 497-949 609-947 (974)
17 PTZ00298 mevalonate kinase; Pr 100.0 1.3E-35 2.8E-40 331.1 24.9 284 497-941 10-295 (328)
18 PRK03926 mevalonate kinase; Pr 100.0 1.6E-34 3.4E-39 320.3 28.0 268 498-941 2-269 (302)
19 PHA03392 egt ecdysteroid UDP-g 100.0 4E-33 8.8E-38 326.9 27.9 371 16-415 21-488 (507)
20 COG2605 Predicted kinase relat 100.0 6.4E-31 1.4E-35 269.3 23.6 286 498-945 2-305 (333)
21 PF13528 Glyco_trans_1_3: Glyc 100.0 2.3E-30 5.1E-35 289.6 27.9 312 16-346 1-317 (318)
22 PF00201 UDPGT: UDP-glucoronos 100.0 1.2E-32 2.6E-37 327.3 0.6 201 188-415 240-464 (500)
23 cd03784 GT1_Gtf_like This fami 99.9 2.5E-25 5.3E-30 257.3 25.2 326 16-350 1-373 (401)
24 PRK12446 undecaprenyldiphospho 99.9 1.2E-24 2.6E-29 245.5 28.6 324 13-369 1-351 (352)
25 PLN02208 glycosyltransferase f 99.9 2.2E-23 4.7E-28 240.3 34.1 339 22-371 10-420 (442)
26 TIGR00661 MJ1255 conserved hyp 99.9 8.7E-24 1.9E-28 236.6 28.6 309 17-350 1-315 (321)
27 TIGR01426 MGT glycosyltransfer 99.9 3.7E-23 8E-28 238.4 27.5 335 23-371 2-390 (392)
28 COG1819 Glycosyl transferases, 99.9 1E-23 2.3E-28 241.2 22.0 340 16-373 2-401 (406)
29 PRK00128 ipk 4-diphosphocytidy 99.9 2E-23 4.4E-28 229.4 21.5 250 498-941 3-258 (286)
30 TIGR01219 Pmev_kin_ERG8 phosph 99.9 7.1E-22 1.5E-26 224.1 28.2 208 500-739 2-285 (454)
31 COG0707 MurG UDP-N-acetylgluco 99.9 2.3E-21 5.1E-26 216.4 28.3 318 22-370 6-354 (357)
32 PLN02670 transferase, transfer 99.9 5.4E-21 1.2E-25 221.1 31.2 342 22-372 12-464 (472)
33 PLN03007 UDP-glucosyltransfera 99.9 2.3E-21 5E-26 227.4 28.5 340 22-372 11-458 (482)
34 PLN02210 UDP-glucosyl transfer 99.9 8.5E-21 1.8E-25 220.2 32.7 334 16-371 9-432 (456)
35 PLN00414 glycosyltransferase f 99.9 1.2E-20 2.7E-25 217.8 31.3 342 22-371 10-421 (446)
36 PRK02534 4-diphosphocytidyl-2- 99.9 3.6E-21 7.8E-26 213.8 22.6 265 498-941 4-276 (312)
37 PLN02764 glycosyltransferase f 99.9 4.7E-20 1E-24 211.7 32.3 346 16-371 6-426 (453)
38 PLN02173 UDP-glucosyl transfer 99.9 4E-20 8.6E-25 212.9 31.2 331 22-372 11-426 (449)
39 PLN02410 UDP-glucoronosyl/UDP- 99.9 6.3E-20 1.4E-24 212.2 31.5 337 16-372 8-428 (451)
40 PLN02562 UDP-glycosyltransfera 99.9 1.1E-19 2.3E-24 210.8 31.6 324 22-371 12-427 (448)
41 TIGR00154 ispE 4-diphosphocyti 99.9 6.4E-21 1.4E-25 209.1 20.3 171 499-739 3-180 (293)
42 PLN02448 UDP-glycosyltransfera 99.9 1E-19 2.2E-24 212.5 31.0 339 16-372 11-435 (459)
43 PLN02207 UDP-glycosyltransfera 99.9 2.5E-19 5.4E-24 207.1 33.2 344 13-372 1-443 (468)
44 PLN02992 coniferyl-alcohol glu 99.9 1.8E-19 3.8E-24 208.8 31.8 331 22-372 11-445 (481)
45 PLN02554 UDP-glycosyltransfera 99.9 1.3E-19 2.8E-24 212.4 29.5 167 193-371 237-455 (481)
46 PLN03004 UDP-glycosyltransfera 99.9 3.3E-19 7.1E-24 205.5 31.1 165 194-371 235-438 (451)
47 PLN02451 homoserine kinase 99.8 7.5E-20 1.6E-24 205.8 24.1 210 610-941 114-327 (370)
48 PLN02863 UDP-glucoronosyl/UDP- 99.8 1E-18 2.2E-23 203.6 32.6 339 15-371 9-448 (477)
49 PLN02555 limonoid glucosyltran 99.8 1.2E-18 2.6E-23 202.4 33.0 333 22-371 13-446 (480)
50 KOG1192 UDP-glucuronosyl and U 99.8 1.3E-19 2.8E-24 215.5 24.5 185 189-388 240-463 (496)
51 TIGR01920 Shik_kin_archae shik 99.8 4.7E-19 1E-23 191.0 24.5 118 611-734 46-164 (261)
52 PLN00164 glucosyltransferase; 99.8 2.4E-18 5.3E-23 201.0 31.7 340 13-372 1-451 (480)
53 PLN02167 UDP-glycosyltransfera 99.8 2.2E-18 4.7E-23 201.8 31.1 152 193-349 242-434 (475)
54 PLN02152 indole-3-acetate beta 99.8 2.3E-18 4.9E-23 198.8 29.7 340 13-371 1-433 (455)
55 PLN03015 UDP-glucosyl transfer 99.8 1.8E-17 3.9E-22 191.0 32.3 341 14-372 2-446 (470)
56 PLN02534 UDP-glycosyltransfera 99.8 3.8E-17 8.2E-22 190.1 33.4 344 16-372 9-464 (491)
57 PRK00726 murG undecaprenyldiph 99.8 2E-17 4.3E-22 188.3 29.8 324 16-371 2-355 (357)
58 PRK01123 shikimate kinase; Pro 99.8 7.9E-18 1.7E-22 184.2 24.4 122 611-739 57-179 (282)
59 COG4671 Predicted glycosyl tra 99.8 4.8E-17 1.1E-21 172.4 28.8 334 14-373 8-391 (400)
60 cd03785 GT1_MurG MurG is an N- 99.8 2.4E-16 5.2E-21 178.6 29.3 302 18-350 2-325 (350)
61 TIGR00191 thrB homoserine kina 99.7 2.9E-17 6.3E-22 181.8 18.1 117 610-739 60-179 (302)
62 PRK03188 4-diphosphocytidyl-2- 99.7 1.3E-16 2.9E-21 176.5 21.7 163 499-731 2-169 (300)
63 COG0083 ThrB Homoserine kinase 99.7 2.7E-16 5.9E-21 168.1 21.4 202 612-942 60-263 (299)
64 TIGR03590 PseG pseudaminic aci 99.7 4.6E-16 1E-20 170.2 22.9 249 23-320 10-279 (279)
65 PRK01212 homoserine kinase; Pr 99.7 2.1E-16 4.7E-21 175.2 18.8 203 611-942 63-267 (301)
66 PRK14614 4-diphosphocytidyl-2- 99.7 3.1E-16 6.7E-21 171.3 19.0 171 498-739 4-179 (280)
67 PRK13609 diacylglycerol glucos 99.7 6E-16 1.3E-20 177.7 22.1 324 16-371 5-369 (380)
68 PLN02605 monogalactosyldiacylg 99.7 2E-15 4.4E-20 173.3 25.5 157 209-370 192-378 (382)
69 PRK13608 diacylglycerol glucos 99.7 1.7E-15 3.8E-20 174.3 24.4 156 210-371 189-369 (391)
70 TIGR01133 murG undecaprenyldip 99.7 6.5E-15 1.4E-19 166.8 28.6 302 17-351 2-323 (348)
71 PRK14611 4-diphosphocytidyl-2- 99.7 1.7E-15 3.7E-20 165.2 22.4 167 499-739 3-174 (275)
72 PRK14608 4-diphosphocytidyl-2- 99.7 8E-15 1.7E-19 160.8 22.4 174 497-739 6-184 (290)
73 PRK14609 4-diphosphocytidyl-2- 99.6 5.2E-15 1.1E-19 160.2 19.3 115 608-739 62-177 (269)
74 PRK14616 4-diphosphocytidyl-2- 99.6 1.6E-14 3.5E-19 158.7 22.4 169 498-739 4-178 (287)
75 PTZ00299 homoserine kinase; Pr 99.6 8.5E-15 1.8E-19 162.1 19.2 260 497-940 7-273 (336)
76 TIGR00215 lpxB lipid-A-disacch 99.6 2.5E-14 5.3E-19 164.0 20.8 296 22-350 11-348 (385)
77 PRK14612 4-diphosphocytidyl-2- 99.6 3.1E-14 6.6E-19 155.5 19.5 166 498-739 3-173 (276)
78 PRK14615 4-diphosphocytidyl-2- 99.6 2.4E-13 5.2E-18 149.5 24.1 171 497-739 6-183 (296)
79 PRK00343 ipk 4-diphosphocytidy 99.6 9.2E-14 2E-18 150.7 19.5 168 498-739 7-180 (271)
80 PF10509 GalKase_gal_bdg: Gala 99.6 1.1E-15 2.4E-20 120.2 2.7 51 485-536 2-52 (52)
81 TIGR00144 beta_RFAP_syn beta-R 99.5 3.6E-12 7.9E-17 141.6 26.2 112 610-735 64-192 (324)
82 PF00288 GHMP_kinases_N: GHMP 99.5 7.5E-14 1.6E-18 118.0 7.4 67 633-701 1-67 (67)
83 PF04101 Glyco_tran_28_C: Glyc 99.5 1.9E-14 4.2E-19 145.3 4.0 127 225-351 1-146 (167)
84 COG3980 spsG Spore coat polysa 99.4 5.4E-12 1.2E-16 130.7 19.7 259 23-350 11-294 (318)
85 PRK14613 4-diphosphocytidyl-2- 99.4 1.3E-11 2.7E-16 135.9 22.3 112 610-739 74-185 (297)
86 PRK00025 lpxB lipid-A-disaccha 99.4 1.1E-11 2.3E-16 142.4 21.9 317 17-371 3-375 (380)
87 TIGR03492 conserved hypothetic 99.3 2.7E-10 5.8E-15 131.0 22.0 314 26-370 6-395 (396)
88 PRK14610 4-diphosphocytidyl-2- 99.3 1.7E-10 3.7E-15 126.2 18.8 167 498-738 4-177 (283)
89 PLN02871 UDP-sulfoquinovose:DA 99.2 2.9E-09 6.3E-14 125.7 26.7 308 13-351 56-402 (465)
90 PRK00650 4-diphosphocytidyl-2- 99.2 8.6E-10 1.9E-14 119.3 18.6 113 610-738 61-173 (288)
91 COG1685 Archaeal shikimate kin 99.2 3.6E-09 7.8E-14 109.4 21.2 164 499-733 4-169 (278)
92 cd04962 GT1_like_5 This family 99.1 9.1E-09 2E-13 117.3 24.8 130 212-350 186-337 (371)
93 cd03814 GT1_like_2 This family 99.1 8.8E-09 1.9E-13 116.1 24.1 290 27-351 14-334 (364)
94 KOG0631 Galactokinase [Carbohy 99.1 4.2E-13 9.1E-18 148.4 -13.6 342 223-619 141-484 (489)
95 KOG4644 L-fucose kinase [Carbo 99.0 1.1E-08 2.4E-13 112.3 19.9 106 630-736 690-806 (948)
96 cd03817 GT1_UGDG_like This fam 99.0 4.7E-08 1E-12 110.3 25.3 297 23-351 10-345 (374)
97 cd03823 GT1_ExpE7_like This fa 99.0 5.5E-08 1.2E-12 109.3 25.3 122 222-351 189-331 (359)
98 TIGR01240 mevDPdecarb diphosph 99.0 2.9E-08 6.2E-13 109.2 22.1 81 610-702 66-146 (305)
99 COG1947 IspE 4-diphosphocytidy 99.0 3E-08 6.5E-13 106.1 20.7 113 611-739 67-179 (289)
100 cd03816 GT1_ALG1_like This fam 99.0 8.5E-08 1.8E-12 111.6 25.6 119 221-349 229-381 (415)
101 cd03808 GT1_cap1E_like This fa 99.0 1.6E-07 3.5E-12 104.9 27.1 121 222-350 186-330 (359)
102 cd03794 GT1_wbuB_like This fam 99.0 9.1E-08 2E-12 108.3 25.3 122 222-351 218-367 (394)
103 cd03825 GT1_wcfI_like This fam 99.0 8.7E-08 1.9E-12 108.6 23.9 134 209-350 177-331 (365)
104 cd03820 GT1_amsD_like This fam 98.9 1.4E-07 3.1E-12 104.9 23.6 120 223-350 177-320 (348)
105 cd04951 GT1_WbdM_like This fam 98.9 4.1E-07 8.8E-12 102.9 26.6 129 211-350 176-327 (360)
106 cd03819 GT1_WavL_like This fam 98.9 4E-07 8.7E-12 102.9 26.5 127 213-348 175-329 (355)
107 PF04007 DUF354: Protein of un 98.9 1.3E-06 2.9E-11 97.1 29.2 307 16-370 1-333 (335)
108 PRK10307 putative glycosyl tra 98.9 1E-06 2.3E-11 102.3 29.8 131 211-350 217-374 (412)
109 cd03812 GT1_CapH_like This fam 98.9 3.3E-07 7.2E-12 103.7 24.9 130 214-353 183-335 (358)
110 cd03807 GT1_WbnK_like This fam 98.9 5.7E-07 1.2E-11 100.9 26.3 129 211-350 181-333 (365)
111 TIGR03088 stp2 sugar transfera 98.9 4.8E-07 1E-11 103.6 26.0 294 16-350 2-339 (374)
112 cd03801 GT1_YqgM_like This fam 98.8 1.1E-06 2.3E-11 98.4 27.1 293 26-350 13-342 (374)
113 COG3890 ERG8 Phosphomevalonate 98.8 3.8E-08 8.3E-13 101.3 13.7 92 643-739 107-207 (337)
114 PRK15179 Vi polysaccharide bio 98.8 7.2E-07 1.6E-11 108.5 27.1 122 223-350 516-660 (694)
115 TIGR03449 mycothiol_MshA UDP-N 98.8 1.1E-06 2.5E-11 101.7 26.3 300 27-350 20-369 (405)
116 PF08544 GHMP_kinases_C: GHMP 98.8 6E-09 1.3E-13 92.5 5.2 65 862-941 2-68 (85)
117 cd03786 GT1_UDP-GlcNAc_2-Epime 98.8 7.8E-07 1.7E-11 101.4 23.9 128 214-352 190-340 (363)
118 cd03805 GT1_ALG2_like This fam 98.8 2.2E-06 4.8E-11 98.6 27.4 120 222-350 209-365 (392)
119 TIGR00236 wecB UDP-N-acetylglu 98.8 1.4E-06 3.1E-11 99.5 25.3 148 211-370 187-364 (365)
120 cd03821 GT1_Bme6_like This fam 98.8 2.1E-06 4.6E-11 96.7 26.3 126 214-350 194-346 (375)
121 cd03800 GT1_Sucrose_synthase T 98.8 6.1E-07 1.3E-11 103.2 22.1 127 215-350 212-369 (398)
122 cd03811 GT1_WabH_like This fam 98.8 3.6E-06 7.8E-11 93.6 27.6 120 222-349 187-332 (353)
123 cd03796 GT1_PIG-A_like This fa 98.7 2.6E-06 5.7E-11 98.6 25.1 119 222-350 191-334 (398)
124 PRK05749 3-deoxy-D-manno-octul 98.7 2.4E-06 5.1E-11 99.9 24.7 82 264-351 304-390 (425)
125 cd03799 GT1_amsK_like This is 98.7 3.8E-06 8.2E-11 94.8 25.5 121 222-350 177-328 (355)
126 PRK04181 4-diphosphocytidyl-2- 98.7 2.4E-07 5.3E-12 99.5 14.2 115 610-739 61-180 (257)
127 cd03792 GT1_Trehalose_phosphor 98.7 1.9E-06 4.2E-11 98.7 22.1 128 212-350 179-338 (372)
128 COG4542 PduX Protein involved 98.6 1E-06 2.2E-11 90.2 16.7 109 621-745 71-181 (293)
129 cd03795 GT1_like_4 This family 98.6 5.3E-06 1.2E-10 93.6 24.6 120 222-350 189-333 (357)
130 cd03798 GT1_wlbH_like This fam 98.6 4.9E-06 1.1E-10 93.3 24.2 122 222-351 200-346 (377)
131 cd03822 GT1_ecORF704_like This 98.6 4.3E-06 9.2E-11 94.4 23.7 119 223-350 184-335 (366)
132 cd03818 GT1_ExpC_like This fam 98.6 5E-06 1.1E-10 96.2 24.3 82 261-350 280-367 (396)
133 cd03802 GT1_AviGT4_like This f 98.6 5.1E-06 1.1E-10 93.0 22.7 114 225-348 172-307 (335)
134 PRK09922 UDP-D-galactose:(gluc 98.6 2.7E-06 5.9E-11 97.0 19.3 122 224-353 180-328 (359)
135 TIGR02472 sucr_P_syn_N sucrose 98.6 1.7E-05 3.7E-10 93.1 26.3 83 260-350 315-407 (439)
136 PLN02275 transferase, transfer 98.5 1.4E-05 3E-10 91.6 24.9 92 246-347 260-371 (371)
137 PRK00654 glgA glycogen synthas 98.5 1.5E-05 3.3E-10 94.2 25.5 137 210-348 268-427 (466)
138 cd05844 GT1_like_7 Glycosyltra 98.5 9.2E-06 2E-10 92.4 22.3 119 224-350 188-337 (367)
139 KOG3349 Predicted glycosyltran 98.5 1.7E-06 3.7E-11 81.8 11.7 111 224-334 4-137 (170)
140 PRK05905 hypothetical protein; 98.4 4E-06 8.8E-11 89.7 15.7 112 610-739 66-179 (258)
141 PLN02407 diphosphomevalonate d 98.4 5.1E-06 1.1E-10 91.2 15.9 60 633-702 105-167 (343)
142 COG1907 Predicted archaeal sug 98.4 1.9E-05 4.2E-10 83.0 18.6 193 630-943 70-277 (312)
143 PRK15427 colanic acid biosynth 98.4 4.1E-05 8.9E-10 88.8 23.4 120 223-350 221-372 (406)
144 TIGR02149 glgA_Coryne glycogen 98.4 5.2E-05 1.1E-09 87.1 23.7 135 209-350 187-353 (388)
145 TIGR02095 glgA glycogen/starch 98.4 8.6E-05 1.9E-09 88.0 25.9 130 211-348 277-436 (473)
146 COG0763 LpxB Lipid A disacchar 98.3 5.8E-05 1.3E-09 83.4 21.8 290 22-350 7-345 (381)
147 PLN02846 digalactosyldiacylgly 98.3 0.00011 2.4E-09 85.4 24.5 113 226-350 230-364 (462)
148 TIGR02470 sucr_synth sucrose s 98.3 0.0004 8.8E-09 85.0 30.2 80 260-347 617-707 (784)
149 PRK14089 ipid-A-disaccharide s 98.3 9E-06 2E-10 91.2 14.7 119 222-345 166-315 (347)
150 cd03809 GT1_mtfB_like This fam 98.3 3.5E-05 7.5E-10 86.9 18.7 117 224-350 195-337 (365)
151 PRK10125 putative glycosyl tra 98.2 8.5E-05 1.8E-09 86.1 21.7 88 245-341 269-363 (405)
152 PRK15484 lipopolysaccharide 1, 98.2 0.00014 3.1E-09 83.6 23.4 131 211-350 181-345 (380)
153 TIGR03087 stp1 sugar transfera 98.2 7.5E-05 1.6E-09 86.4 21.0 95 246-350 258-363 (397)
154 PRK15490 Vi polysaccharide bio 98.2 0.00014 3.1E-09 85.1 22.9 82 246-333 428-524 (578)
155 PF02684 LpxB: Lipid-A-disacch 98.2 6.8E-05 1.5E-09 84.7 19.4 292 22-350 4-341 (373)
156 cd04955 GT1_like_6 This family 98.2 0.00045 9.8E-09 78.1 26.5 125 212-350 183-331 (363)
157 KOG1537 Homoserine kinase [Ami 98.2 6.1E-06 1.3E-10 84.5 9.0 54 630-683 93-146 (355)
158 PRK14099 glycogen synthase; Pr 98.2 0.00074 1.6E-08 80.1 27.9 133 211-345 281-440 (485)
159 TIGR02468 sucrsPsyn_pln sucros 98.1 0.00038 8.2E-09 87.1 25.4 83 260-350 546-638 (1050)
160 PRK01021 lpxB lipid-A-disaccha 98.1 0.00022 4.7E-09 84.1 21.7 227 106-350 298-572 (608)
161 KOG4519 Phosphomevalonate kina 98.1 0.0009 1.9E-08 71.2 23.2 67 643-712 152-231 (459)
162 PLN02501 digalactosyldiacylgly 98.1 0.00012 2.6E-09 86.8 18.6 224 108-351 424-683 (794)
163 PLN02316 synthase/transferase 98.1 0.0016 3.4E-08 81.9 29.2 136 211-349 827-998 (1036)
164 cd01635 Glycosyltransferase_GT 98.1 0.00011 2.3E-09 76.8 15.9 53 261-313 160-219 (229)
165 cd03804 GT1_wbaZ_like This fam 98.0 0.0001 2.2E-09 83.5 15.9 117 226-350 197-327 (351)
166 cd03791 GT1_Glycogen_synthase_ 98.0 0.00076 1.6E-08 80.0 23.4 137 211-349 282-442 (476)
167 cd03806 GT1_ALG11_like This fa 97.9 0.0022 4.7E-08 74.8 25.5 118 224-350 237-393 (419)
168 PLN00142 sucrose synthase 97.9 0.0013 2.8E-08 80.7 22.9 125 215-347 563-730 (815)
169 KOG2833 Mevalonate pyrophospha 97.9 0.00039 8.5E-09 73.6 15.4 62 631-702 105-166 (395)
170 TIGR03568 NeuC_NnaA UDP-N-acet 97.8 0.0065 1.4E-07 69.4 26.5 212 107-347 82-337 (365)
171 COG3407 MVD1 Mevalonate pyroph 97.8 0.0017 3.8E-08 70.9 20.2 81 610-702 71-151 (329)
172 cd03813 GT1_like_3 This family 97.7 0.0015 3.3E-08 77.4 19.4 120 223-351 292-444 (475)
173 cd04950 GT1_like_1 Glycosyltra 97.7 0.0029 6.3E-08 72.6 20.9 115 224-350 205-341 (373)
174 PF00534 Glycos_transf_1: Glyc 97.6 0.00014 3.1E-09 73.2 8.0 132 210-350 2-159 (172)
175 PF02350 Epimerase_2: UDP-N-ac 97.6 0.00023 5E-09 80.5 10.2 117 221-349 178-318 (346)
176 COG1829 Predicted archaeal kin 97.6 0.0016 3.5E-08 68.6 15.1 93 630-732 73-169 (283)
177 cd04949 GT1_gtfA_like This fam 97.6 0.00099 2.2E-08 76.1 14.9 120 224-350 204-346 (372)
178 PF03033 Glyco_transf_28: Glyc 97.5 6.3E-05 1.4E-09 73.2 2.8 32 22-53 4-35 (139)
179 TIGR02918 accessory Sec system 97.4 0.0067 1.5E-07 72.1 18.5 120 223-348 318-466 (500)
180 COG1817 Uncharacterized protei 97.3 0.054 1.2E-06 58.3 22.6 307 17-371 2-340 (346)
181 COG0381 WecB UDP-N-acetylgluco 97.3 0.066 1.4E-06 59.9 23.3 100 262-371 262-372 (383)
182 PLN02949 transferase, transfer 97.2 0.035 7.5E-07 65.5 22.3 95 246-350 302-423 (463)
183 COG5017 Uncharacterized conser 96.9 0.0085 1.8E-07 56.3 10.0 108 226-334 2-126 (161)
184 PF13692 Glyco_trans_1_4: Glyc 96.4 0.0064 1.4E-07 58.4 6.5 94 246-349 33-135 (135)
185 PHA01633 putative glycosyl tra 96.4 0.014 3E-07 65.5 9.5 138 211-350 135-308 (335)
186 PRK14098 glycogen synthase; Pr 96.1 0.04 8.6E-07 65.6 12.0 134 211-348 293-450 (489)
187 PLN02939 transferase, transfer 96.0 0.072 1.6E-06 66.4 13.7 136 210-348 763-930 (977)
188 cd04946 GT1_AmsK_like This fam 95.9 0.04 8.8E-07 64.0 10.6 122 222-350 228-378 (407)
189 COG1519 KdtA 3-deoxy-D-manno-o 95.5 5.7 0.00012 45.3 25.0 81 263-350 301-387 (419)
190 PF06258 Mito_fiss_Elm1: Mitoc 95.4 2.2 4.8E-05 47.5 21.6 96 262-370 209-308 (311)
191 PF08660 Alg14: Oligosaccharid 93.2 0.74 1.6E-05 46.5 10.5 39 110-148 84-131 (170)
192 TIGR02195 heptsyl_trn_II lipop 92.9 7.4 0.00016 43.7 19.5 93 213-306 164-277 (334)
193 KOG1111 N-acetylglucosaminyltr 92.6 2.5 5.4E-05 46.8 14.0 68 246-313 225-309 (426)
194 PF13477 Glyco_trans_4_2: Glyc 92.6 1.4 3E-05 42.3 11.3 99 18-144 2-105 (139)
195 TIGR02193 heptsyl_trn_I lipopo 92.5 4.4 9.6E-05 45.2 16.9 32 23-54 6-39 (319)
196 PRK10916 ADP-heptose:LPS hepto 92.5 7.9 0.00017 43.8 19.0 91 214-306 171-287 (348)
197 PHA01630 putative group 1 glyc 92.1 0.42 9.1E-06 53.8 8.0 42 272-313 202-247 (331)
198 PF13579 Glyco_trans_4_4: Glyc 91.4 0.59 1.3E-05 45.4 7.3 27 28-54 2-28 (160)
199 PRK09814 beta-1,6-galactofuran 91.3 1 2.2E-05 50.8 10.0 109 226-346 171-297 (333)
200 COG2099 CobK Precorrin-6x redu 90.5 9.9 0.00022 40.4 15.3 146 111-308 59-231 (257)
201 cd03789 GT1_LPS_heptosyltransf 89.7 16 0.00035 39.8 17.5 33 273-306 192-224 (279)
202 COG3914 Spy Predicted O-linked 89.2 1.7 3.6E-05 51.0 9.2 95 214-314 421-542 (620)
203 PF13844 Glyco_transf_41: Glyc 88.9 0.93 2E-05 52.8 7.1 111 214-327 276-411 (468)
204 PF13439 Glyco_transf_4: Glyco 88.9 3.7 8.1E-05 40.4 10.9 27 27-53 12-38 (177)
205 TIGR00715 precor6x_red precorr 87.8 44 0.00096 36.1 20.2 49 261-309 174-233 (256)
206 TIGR02400 trehalose_OtsA alpha 87.0 1.3 2.8E-05 52.3 6.9 68 272-350 348-423 (456)
207 TIGR02201 heptsyl_trn_III lipo 86.2 64 0.0014 36.3 20.4 84 222-306 180-286 (344)
208 PRK10422 lipopolysaccharide co 85.3 72 0.0016 36.1 21.1 84 222-306 182-288 (352)
209 COG0859 RfaF ADP-heptose:LPS h 85.1 71 0.0015 35.9 20.5 83 223-306 175-277 (334)
210 PF01975 SurE: Survival protei 85.1 4 8.7E-05 42.2 8.5 35 17-53 2-36 (196)
211 COG4370 Uncharacterized protei 82.1 2.8 6E-05 45.3 5.9 75 273-352 305-382 (412)
212 cd03788 GT1_TPS Trehalose-6-Ph 81.4 1.4 3.1E-05 52.0 4.0 68 272-350 353-428 (460)
213 cd03793 GT1_Glycogen_synthase_ 78.6 5 0.00011 48.0 7.2 71 275-347 470-550 (590)
214 PF05159 Capsule_synth: Capsul 74.4 6.2 0.00013 42.9 6.3 48 262-310 182-229 (269)
215 COG0297 GlgA Glycogen synthase 72.9 18 0.00038 42.9 9.7 136 210-348 279-441 (487)
216 COG3660 Predicted nucleoside-d 72.2 18 0.00039 38.6 8.5 83 275-370 240-325 (329)
217 PF02571 CbiJ: Precorrin-6x re 72.1 1.1E+02 0.0024 33.0 14.9 151 111-310 59-230 (249)
218 PLN03063 alpha,alpha-trehalose 71.4 7.6 0.00016 49.1 6.7 67 274-350 370-444 (797)
219 cd00550 ArsA_ATPase Oxyanion-t 69.3 41 0.00089 36.3 11.0 38 18-55 2-39 (254)
220 PF07429 Glyco_transf_56: 4-al 69.1 47 0.001 37.2 11.3 80 262-349 245-333 (360)
221 TIGR03713 acc_sec_asp1 accesso 68.5 4.4 9.4E-05 48.6 3.6 76 262-350 409-489 (519)
222 COG0438 RfaG Glycosyltransfera 68.5 13 0.00029 40.2 7.3 118 225-350 200-343 (381)
223 PF04464 Glyphos_transf: CDP-G 65.6 8.7 0.00019 43.8 5.2 97 210-307 179-296 (369)
224 PRK10017 colanic acid biosynth 64.1 21 0.00046 41.7 8.0 72 275-352 323-395 (426)
225 PRK02797 4-alpha-L-fucosyltran 61.9 25 0.00055 38.7 7.5 78 262-347 206-292 (322)
226 COG0496 SurE Predicted acid ph 59.6 42 0.00091 36.0 8.5 24 29-53 12-35 (252)
227 PF12000 Glyco_trans_4_3: Gkyc 59.3 46 0.001 33.6 8.4 38 109-146 55-96 (171)
228 PF06925 MGDG_synth: Monogalac 58.7 20 0.00044 35.9 5.9 41 108-148 79-127 (169)
229 PRK13932 stationary phase surv 58.3 1.3E+02 0.0029 32.5 12.1 36 15-53 5-40 (257)
230 KOG0853 Glycosyltransferase [C 55.6 5.1 0.00011 46.9 1.0 82 275-363 361-448 (495)
231 PRK08248 O-acetylhomoserine am 55.1 1.7 3.7E-05 50.8 -3.0 44 404-452 378-423 (431)
232 PRK07812 O-acetylhomoserine am 55.0 4.2 9E-05 47.7 0.2 44 404-452 382-427 (436)
233 TIGR01326 OAH_OAS_sulfhy OAH/O 51.7 2.2 4.8E-05 49.7 -2.8 46 402-452 368-415 (418)
234 PLN02509 cystathionine beta-ly 51.5 2.2 4.8E-05 50.3 -2.9 44 404-452 412-457 (464)
235 cd02037 MRP-like MRP (Multiple 51.3 79 0.0017 31.5 8.8 37 18-54 2-38 (169)
236 PRK07049 methionine gamma-lyas 50.9 2.4 5.1E-05 49.6 -2.8 46 402-452 375-422 (427)
237 PF13524 Glyco_trans_1_2: Glyc 49.8 30 0.00066 30.4 4.9 54 287-350 10-63 (92)
238 PRK12311 rpsB 30S ribosomal pr 49.5 71 0.0015 35.7 8.6 29 118-146 152-183 (326)
239 PRK06084 O-acetylhomoserine am 49.5 6.1 0.00013 46.2 0.4 44 404-452 373-418 (425)
240 COG0003 ArsA Predicted ATPase 49.3 2E+02 0.0043 32.3 12.1 40 17-56 3-42 (322)
241 PRK06176 cystathionine gamma-s 48.8 2.4 5.2E-05 48.7 -3.1 43 405-452 330-374 (380)
242 TIGR02919 accessory Sec system 47.2 39 0.00085 39.6 6.5 79 262-350 328-412 (438)
243 PRK08249 cystathionine gamma-s 46.5 3.1 6.6E-05 48.2 -2.7 44 404-452 344-389 (398)
244 PF01075 Glyco_transf_9: Glyco 46.2 1E+02 0.0022 32.6 9.3 84 221-306 103-209 (247)
245 PRK07504 O-succinylhomoserine 45.3 3 6.4E-05 48.3 -3.1 44 404-452 346-391 (398)
246 PRK06434 cystathionine gamma-l 45.2 2.8 6.1E-05 48.2 -3.3 44 404-452 335-380 (384)
247 PRK08045 cystathionine gamma-s 44.9 3.3 7.1E-05 47.8 -2.8 44 404-452 333-378 (386)
248 PRK08133 O-succinylhomoserine 43.2 3.7 8.1E-05 47.4 -2.7 44 404-452 341-386 (390)
249 PRK06767 methionine gamma-lyas 42.4 4.6 9.9E-05 46.6 -2.1 44 404-452 336-381 (386)
250 PRK08861 cystathionine gamma-s 42.2 3.6 7.9E-05 47.4 -2.9 33 420-453 346-380 (388)
251 COG0052 RpsB Ribosomal protein 42.2 72 0.0016 33.9 6.8 29 119-147 157-188 (252)
252 PRK07671 cystathionine beta-ly 41.9 3.9 8.4E-05 47.0 -2.8 44 404-452 329-374 (377)
253 PRK01077 cobyrinic acid a,c-di 41.3 1.4E+02 0.0031 35.2 10.1 40 13-54 3-42 (451)
254 PRK05613 O-acetylhomoserine am 41.2 4.1 8.8E-05 47.8 -2.8 32 420-452 399-432 (437)
255 KOG0053 Cystathionine beta-lya 40.2 6.3 0.00014 44.9 -1.4 47 400-452 354-402 (409)
256 TIGR01329 cysta_beta_ly_E cyst 40.1 4.4 9.5E-05 46.6 -2.7 43 405-452 327-371 (378)
257 PRK08134 O-acetylhomoserine am 39.8 3.9 8.5E-05 47.9 -3.2 42 406-452 380-423 (433)
258 TIGR01328 met_gam_lyase methio 39.7 5.3 0.00012 46.1 -2.1 32 420-452 353-386 (391)
259 PRK06460 hypothetical protein; 39.6 4 8.7E-05 46.9 -3.2 43 405-452 326-370 (376)
260 PRK05994 O-acetylhomoserine am 38.9 4.5 9.8E-05 47.3 -2.9 25 428-452 396-422 (427)
261 COG0132 BioD Dethiobiotin synt 38.7 2.4E+02 0.0052 29.8 10.1 32 21-52 8-39 (223)
262 PF00448 SRP54: SRP54-type pro 38.3 2.4E+02 0.0053 29.0 10.1 34 20-53 5-38 (196)
263 PF00551 Formyl_trans_N: Formy 38.0 1.1E+02 0.0024 31.1 7.4 34 16-53 1-37 (181)
264 PF04413 Glycos_transf_N: 3-De 37.6 75 0.0016 32.5 6.1 92 22-144 26-124 (186)
265 PRK14501 putative bifunctional 36.7 28 0.00062 43.7 3.5 68 272-350 354-429 (726)
266 PRK05939 hypothetical protein; 36.5 5.9 0.00013 45.8 -2.4 43 405-452 348-392 (397)
267 PRK07503 methionine gamma-lyas 35.2 6.9 0.00015 45.4 -2.2 32 420-452 359-392 (403)
268 PF03641 Lysine_decarbox: Poss 35.1 79 0.0017 30.4 5.5 50 276-325 50-111 (133)
269 TIGR02080 O_succ_thio_ly O-suc 35.0 5.8 0.00012 45.7 -2.8 32 420-452 344-377 (382)
270 PF02441 Flavoprotein: Flavopr 34.8 46 0.001 31.7 3.8 34 17-52 2-35 (129)
271 PRK06234 methionine gamma-lyas 34.5 6.6 0.00014 45.5 -2.5 43 405-452 349-393 (400)
272 PRK08776 cystathionine gamma-s 34.2 5.2 0.00011 46.4 -3.4 33 420-453 353-387 (405)
273 TIGR00730 conserved hypothetic 33.9 78 0.0017 32.2 5.5 50 276-325 93-153 (178)
274 PRK05986 cob(I)alamin adenolsy 33.8 3.1E+02 0.0067 28.3 9.7 32 21-52 27-58 (191)
275 COG0626 MetC Cystathionine bet 33.7 7.5 0.00016 44.6 -2.1 44 404-452 345-390 (396)
276 cd01425 RPS2 Ribosomal protein 33.3 1.4E+02 0.003 30.8 7.3 28 27-54 39-66 (193)
277 PRK06702 O-acetylhomoserine am 33.1 6.8 0.00015 45.8 -2.7 25 428-452 394-420 (432)
278 COG1703 ArgK Putative periplas 31.7 2.8E+02 0.0062 30.6 9.4 33 22-54 57-89 (323)
279 PF01053 Cys_Met_Meta_PP: Cys/ 31.7 3.5 7.7E-05 47.4 -5.2 24 428-451 357-382 (386)
280 PRK08305 spoVFB dipicolinate s 31.5 66 0.0014 33.2 4.5 36 15-52 5-41 (196)
281 TIGR02398 gluc_glyc_Psyn gluco 31.3 89 0.0019 37.2 6.1 65 275-350 377-449 (487)
282 PF02374 ArsA_ATPase: Anion-tr 31.1 69 0.0015 35.6 5.0 39 17-55 2-40 (305)
283 TIGR00725 conserved hypothetic 30.9 73 0.0016 31.7 4.6 39 275-313 86-129 (159)
284 PRK08574 cystathionine gamma-s 30.2 7.3 0.00016 44.9 -3.0 43 405-452 336-380 (385)
285 TIGR01325 O_suc_HS_sulf O-succ 29.3 7.4 0.00016 44.7 -3.2 32 420-452 345-378 (380)
286 cd00561 CobA_CobO_BtuR ATP:cor 29.2 5.9E+02 0.013 25.4 11.0 30 22-51 8-37 (159)
287 COG4088 Predicted nucleotide k 29.1 52 0.0011 34.2 3.2 33 20-52 5-37 (261)
288 PRK05632 phosphate acetyltrans 27.0 7E+02 0.015 31.2 13.3 35 18-52 5-39 (684)
289 COG2327 WcaK Polysaccharide py 26.9 1.9E+02 0.0041 33.2 7.4 82 262-350 266-351 (385)
290 PF06564 YhjQ: YhjQ protein; 26.4 1.2E+02 0.0027 32.4 5.7 40 13-54 1-40 (243)
291 cd03109 DTBS Dethiobiotin synt 26.3 1.2E+02 0.0025 29.2 5.0 36 19-54 2-37 (134)
292 CHL00067 rps2 ribosomal protei 26.0 3.1E+02 0.0068 29.1 8.6 31 118-148 161-194 (230)
293 PRK13234 nifH nitrogenase redu 25.5 1.3E+02 0.0028 33.2 5.9 42 11-55 2-43 (295)
294 PRK00207 sulfur transfer compl 25.1 1.3E+02 0.0028 28.7 5.1 35 16-50 3-38 (128)
295 PF04127 DFP: DNA / pantothena 24.5 69 0.0015 32.8 3.2 38 11-53 15-52 (185)
296 PRK10964 ADP-heptose:LPS hepto 24.2 2.5E+02 0.0055 31.1 8.1 36 17-53 2-39 (322)
297 PF05014 Nuc_deoxyrib_tr: Nucl 23.7 1.1E+02 0.0023 28.4 4.1 34 275-308 57-98 (113)
298 PRK02261 methylaspartate mutas 23.7 1.2E+02 0.0027 29.3 4.7 40 13-53 1-40 (137)
299 PRK04885 ppnK inorganic polyph 23.5 1.6E+02 0.0035 32.0 6.0 53 279-349 35-93 (265)
300 PRK07269 cystathionine gamma-s 23.3 12 0.00025 42.9 -3.0 32 420-452 327-360 (364)
301 PRK07810 O-succinylhomoserine 23.3 12 0.00026 43.5 -3.0 25 428-452 374-400 (403)
302 PRK04539 ppnK inorganic polyph 22.9 1.9E+02 0.0041 32.0 6.5 57 275-349 64-124 (296)
303 PF12146 Hydrolase_4: Putative 22.4 1.8E+02 0.004 25.1 5.0 31 20-51 20-50 (79)
304 TIGR01012 Sa_S2_E_A ribosomal 22.2 1.1E+02 0.0023 31.7 4.0 31 117-147 107-140 (196)
305 TIGR00379 cobB cobyrinic acid 22.1 5.5E+02 0.012 30.3 10.5 35 20-54 4-38 (449)
306 cd02032 Bchl_like This family 21.8 1.5E+02 0.0032 32.0 5.5 38 17-55 2-39 (267)
307 PRK10037 cell division protein 21.7 1.6E+02 0.0035 31.4 5.6 41 13-55 1-41 (250)
308 PF07015 VirC1: VirC1 protein; 21.3 1.9E+02 0.0042 30.6 5.8 41 17-57 3-43 (231)
309 PRK04020 rps2P 30S ribosomal p 21.0 1.1E+02 0.0025 31.7 4.0 31 117-147 113-146 (204)
310 KOG0832 Mitochondrial/chloropl 20.8 98 0.0021 32.4 3.4 124 10-145 68-203 (251)
311 PF15024 Glyco_transf_18: Glyc 20.3 2.7E+02 0.0059 33.4 7.3 91 260-350 320-431 (559)
312 PRK08247 cystathionine gamma-s 20.2 14 0.00031 42.1 -3.1 32 420-452 327-360 (366)
313 cd02040 NifH NifH gene encodes 20.2 1.8E+02 0.004 31.2 5.7 40 13-55 1-40 (270)
314 TIGR01007 eps_fam capsular exo 20.2 2.3E+02 0.0049 29.1 6.2 36 18-53 20-55 (204)
315 PF13614 AAA_31: AAA domain; P 20.1 2E+02 0.0043 27.8 5.5 37 17-53 2-38 (157)
No 1
>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-70 Score=591.03 Aligned_cols=353 Identities=31% Similarity=0.490 Sum_probs=292.7
Q ss_pred HHHHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCC
Q 002206 480 QMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPM 559 (953)
Q Consensus 480 ~~~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 559 (953)
..+-..-+...|+..++.++++|||||||||||+||+||.|+|||||.+|++++++++|.++++++
T Consensus 6 ~~~~~~~f~~~f~~~~~~~~~~aPGRvNLIGEHtDYn~G~VlP~Ain~~t~v~v~~r~d~~v~l~s-------------- 71 (390)
T COG0153 6 KEKLQALFAEHFGYVEPTVTAFAPGRVNLIGEHTDYNGGFVLPCAINYGTYVAVAKRDDGKVRLYS-------------- 71 (390)
T ss_pred HHHHHHHHHHHhcccCcceEecCCceEEeeccceeccCceEEEEEeecceEEEEEEccCceEEEEe--------------
Confidence 334445566777754678899999999999999999999999999999999999999998765543
Q ss_pred CeEEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeC
Q 002206 560 PVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSA 639 (953)
Q Consensus 560 ~~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~ 639 (953)
.+. .+....+..+ ++ +. ..+..+|.||++|+++. ++..|+.+ +|++++|.|+
T Consensus 72 -------~n~--~~~~~~~~~~-~d-------~~---------~~~~~~W~nYvkgvi~~-l~~~g~~~-~G~~i~i~gn 123 (390)
T COG0153 72 -------ANF--GNAGDIFFLL-LD-------IA---------KEKIDDWANYVKGVIKA-LQKRGYAF-TGLDIVISGN 123 (390)
T ss_pred -------CCC--ccccceeecc-hh-------hc---------ccccchhhhhHHHHHHH-HHhcCCCc-CCeeEEEecC
Confidence 221 1111112111 11 11 12347999999999886 56788888 7999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeee
Q 002206 640 VPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVV 719 (953)
Q Consensus 640 iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~ 719 (953)
||.|+|||||||++||++.++..+++.++++.+++++|+.+|++|+|++||+|||+++++|+.++++++||+++++ +++
T Consensus 124 IP~GaGLSSSAAleva~~~al~~l~~~~~~k~~la~i~q~AEn~fvGvn~G~mDQ~~s~~G~~~~al~ld~~~l~~-~~~ 202 (390)
T COG0153 124 IPIGAGLSSSAALEVAVALALQRLFNLPLDKAELAKIAQVAENQFVGVNCGIMDQLASAFGKKDHALLLDCRTLEY-EPV 202 (390)
T ss_pred CCCCCCcCchHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhccCCcCchHHHHHHHhCCCCcEEEEEcccCce-EEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999888 899
Q ss_pred ecCCC-eEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHh
Q 002206 720 EIPSH-IRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLC 798 (953)
Q Consensus 720 ~~p~~-~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 798 (953)
++|.. +.|+|+||+++|.++.++||.||++|. .| .+.|+. .+..|+
T Consensus 203 ~~p~~~~~ivI~ns~vkr~la~seYn~Rr~ece--------~A-----------------------~~~l~~--~~~~L~ 249 (390)
T COG0153 203 PFPVGGVSIVIVNSNVKRELADSEYNERRAECE--------EA-----------------------AEFLGV--SIKSLR 249 (390)
T ss_pred ccCccceEEEEecCCCccccchhHHHHHHHHHH--------HH-----------------------HHHHHH--hhhhhh
Confidence 99976 999999999999999999999998762 23 233332 256788
Q ss_pred cCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHH
Q 002206 799 NLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLG 878 (953)
Q Consensus 799 ~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG 878 (953)
+++.+.|.+. +..+. . |+ .+++|++|+++||+||.++.++|+++ |+..||
T Consensus 250 d~~~~~~~~~-----~~~i~----------------~-~~----~~~rRa~hvv~En~Rvl~a~~Al~~~----dl~~fG 299 (390)
T COG0153 250 DVTDEEFAAL-----QAEIE----------------V-DP----KIARRARHVVTENQRVLEAAKALRSG----DLTEFG 299 (390)
T ss_pred hcCHHHHHhh-----hhhcc----------------c-ch----HHHHHHHHHHhHHHHHHHHHHHHHcC----CHHHHH
Confidence 8888877662 22110 0 11 36789999999999999999999996 899999
Q ss_pred HHHHHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC-Chhhhhh
Q 002206 879 ELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN-SLRSSEQ 948 (953)
Q Consensus 879 ~lm~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~-~~~~~~~ 948 (953)
+||++||.|||+ |+|||||||+||++++. ..|++||||||||||||+|+|.++ .+++.++
T Consensus 300 ~Lm~~SH~slrddyevt~pElD~lve~a~~----------~~G~~GaRmTGaGfGGc~IaLv~~~~v~~~~e 361 (390)
T COG0153 300 ELMNESHESLRDDYEVTCPELDTLVEIALA----------AGGAYGARMTGAGFGGCVIALVPNDDVEAVAE 361 (390)
T ss_pred HHHHHHHHHHHhcccccchhHHHHHHHHHH----------cCCcccceecCCCCCceEEEEechhhHHHHHH
Confidence 999999999999 79999999999999987 268899999999999999988665 5666554
No 2
>PLN02865 galactokinase
Probab=100.00 E-value=1.7e-63 Score=561.21 Aligned_cols=361 Identities=21% Similarity=0.291 Sum_probs=286.0
Q ss_pred HHHHHHhcCCCCCCc-eEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCC
Q 002206 482 RERKAAAGLFNWEEE-IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMP 560 (953)
Q Consensus 482 ~~~~~~~~~f~~~~~-~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 560 (953)
+-+..|...||.+++ ..+++|||||||+|||+||+||.||||||+++|++++++++++++++
T Consensus 14 ~l~~~F~~~fg~~p~~~~~~~APGRVnlIGEHtDYngG~VLp~AI~~~~~va~~~~~~~~i~v----------------- 76 (423)
T PLN02865 14 EIRERVAAMSGRNSGEVRVVVSPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDPEVLL----------------- 76 (423)
T ss_pred HHHHHHHHHhCCCcccceEEEcCcceecccccccCCCCeEEeEEeeccEEEEEEECCCCEEEE-----------------
Confidence 556678899997644 26889999999999999999999999999999999999999875544
Q ss_pred eEEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCC
Q 002206 561 VLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAV 640 (953)
Q Consensus 561 ~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~i 640 (953)
.|.+. .+ .+++++++.. .++.+. .....+...|.+|++|++..+ .+.|..+.+||++.|+|+|
T Consensus 77 ----~s~~~--~~---~~~~~~~~~~---~~~~~~----~~~~~~~~~W~~Yv~gv~~~l-~~~g~~~~~G~~~~v~g~v 139 (423)
T PLN02865 77 ----RSAQF--EG---EVRFRVDEIQ---HPIANV----SSDSKEESNWGDYARGAVYAL-QSRGHALSQGITGYISGSE 139 (423)
T ss_pred ----EECCC--CC---ceEEeccccc---cccccc----cccCCCCCCHHHHHHHHHHHH-HHcCCCCCCceEEEEECCC
Confidence 33221 10 1233332210 011000 001134468999999999875 4677655479999999999
Q ss_pred -CCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeee
Q 002206 641 -PEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVV 719 (953)
Q Consensus 641 -P~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~ 719 (953)
|+|+|||||||++||++.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++|..++++++||+++.+ +.+
T Consensus 140 pP~gsGLsSSAAl~va~~~al~~~~~~~~~~~~la~~a~~~E~~~~G~~~G~mDQ~as~~~~~g~~~~iDf~~l~~-~~v 218 (423)
T PLN02865 140 GLDSSGLSSSAAVGVAYLLALENANNLTVSPEDNIELDRLIENEYLGLRNGILDQSAILLSRYGCLTFMDCKTLDH-KLV 218 (423)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccccHHHHHhcccCceEEEEccCCCc-cee
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999776 677
Q ss_pred ecC-------CCeEEEEEeCCCccccC-CCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHh
Q 002206 720 EIP-------SHIRFWGIDSGIRHSVG-GADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAE 791 (953)
Q Consensus 720 ~~p-------~~~~~vl~dsgv~~~~~-~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 791 (953)
++| .++.|+++|||++|... +++||.||.+|.. |+++|.++++..
T Consensus 219 pl~~~~~~~~~~~~ivv~~s~~~h~l~~~~~Yn~Rr~Ec~~--------aa~~l~~~~~~~------------------- 271 (423)
T PLN02865 219 SLQFQQPGGEKPFKILLAFSGLRHALTNKPGYNLRVSECQE--------AARFLLEASGND------------------- 271 (423)
T ss_pred ecCcccccCCCCeEEEEEeCCCchhhcccchhhHHHHHHHH--------HHHHHHHhcCCc-------------------
Confidence 766 36899999999999977 7899999988843 333332221100
Q ss_pred hhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCCh
Q 002206 792 ASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASD 871 (953)
Q Consensus 792 ~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~ 871 (953)
.....||+++.+++... ...+++ .+++|++|+++||.||.++.++|+++
T Consensus 272 ~~~~~Lr~~~~~~~~~~-~~~l~~---------------------------~l~~Ra~Hv~~E~~Rv~~~~~al~~~--- 320 (423)
T PLN02865 272 ELEPLLCNVEPEVYEAH-KCKLEA---------------------------VLARRAEHYFSENMRVIKGVEAWASG--- 320 (423)
T ss_pred cchhhhhcCCHHHHHHH-HhhcCH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 01345788887776542 122321 25789999999999999999999996
Q ss_pred HHHHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC-Chhhh
Q 002206 872 DQLTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN-SLRSS 946 (953)
Q Consensus 872 ~~~~~lG~lm~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~-~~~~~ 946 (953)
|++.||+||++||.|||+ |+|||||+|.||+.+++ .+|++||||||||||||+++|.+. ++++.
T Consensus 321 -d~~~~g~lm~~sh~Slrd~yevS~~eld~lv~~a~~----------~~Ga~GaR~tGgGfGGc~vaLv~~~~~~~~ 386 (423)
T PLN02865 321 -NLEEFGKLISASGLSSIENYECGCEPLIQLYEILLK----------APGVYGARFSGAGFRGCCVAFVDAEMAEEA 386 (423)
T ss_pred -CHHHHHHHHHHhhhhHHhhccCCcHHHHHHHHHHHh----------cCCCeEEEEeccCCccEEEEEEchhHHHHH
Confidence 999999999999999999 79999999999999997 259999999999999999887654 45533
No 3
>PTZ00290 galactokinase; Provisional
Probab=100.00 E-value=1e-62 Score=559.58 Aligned_cols=356 Identities=23% Similarity=0.355 Sum_probs=268.2
Q ss_pred HHHHHHHhcCCCCCCc-----eEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCC
Q 002206 481 MRERKAAAGLFNWEEE-----IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKG 555 (953)
Q Consensus 481 ~~~~~~~~~~f~~~~~-----~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~ 555 (953)
.+-+..|...||.+++ .++++|||||||+|||+||+||.||||||+++|+|+++++.+..
T Consensus 16 ~~l~~~F~~~fG~~p~~~~~~~~~~~APGRVnLIGEHtDYngG~VLp~AId~~~~va~~~~~~~~--------------- 80 (468)
T PTZ00290 16 STLKPIFLETFKVENDADVEWLLFTFAPGRVNFIGEHVDYMGGYVCPAAVLEGCHILVGRVKHFC--------------- 80 (468)
T ss_pred HHHHHHHHHHhCCCcccccceeEEEeccceeeecccccccCCCeeeeccccCcEEEEEeecCCCC---------------
Confidence 3456678899997653 17899999999999999999999999999999999998874311
Q ss_pred CCCCCeEEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCC----CCC
Q 002206 556 QGPMPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF----EDS 631 (953)
Q Consensus 556 ~~~~~~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~----~~g 631 (953)
.+.+++.+.. . ..|+++ ... .......|.||+++++..++++.|.++ .+|
T Consensus 81 ---~~~i~~~~~~----~--~~~~~~--~~~---------------~~~~~~~W~nYv~gv~~~~l~~~g~~~~~~~~~G 134 (468)
T PTZ00290 81 ---DHKLRFATET----D--EHFVLD--HLG---------------GAKHNKAWTTFVRGAATLRLNRLGVAIDAPSLQG 134 (468)
T ss_pred ---CCeEEEEECC----C--ceeecC--ccc---------------ccCCcccHHHHHHHHHHHHHHHhCCCcccCCCCC
Confidence 1234553221 0 123222 110 012236899999999887677777742 269
Q ss_pred EEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCC-----C------------C---CHHHHHHHHHHhhccccCCCCCc
Q 002206 632 ISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGL-----N------------I---HPRDLALLCQKVENHIVGAPCGV 691 (953)
Q Consensus 632 ~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~-----~------------l---~~~~l~~~a~~~E~~~~G~~sG~ 691 (953)
|++.|.|+||+|+|||||||++||++.|++.+++. . + +..+++++|+++|+.++|+|||+
T Consensus 135 ~d~~i~gdVP~GaGLSSSAAleva~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~aqraEn~~vGv~cGi 214 (468)
T PTZ00290 135 VCMVVHGTLPMGAGMSASASFGVALLNAINTVVTRRYKGCPTSPGRRYSILPPMSKEELIELAKQARRIETEFCGVNVGI 214 (468)
T ss_pred eEEEEeCCCCCCCCcchHHHHHHHHHHHHHHHhhhhccccccccccccccccccCcccHHHHHHHHHHHHHhhcCCCcch
Confidence 99999999999999999999999999999998732 1 2 34899999999999999999999
Q ss_pred cchhhhhccCcceEEEEeecCccceeeeecC----CCeEEEEEeCCCccccCCC---CCccchhhhhhhhhHHHhhhhcc
Q 002206 692 MDQMASACGEANKLLAMVCQPAELLGVVEIP----SHIRFWGIDSGIRHSVGGA---DYGSVRAGAFMGRKMIKSTASGM 764 (953)
Q Consensus 692 ~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p----~~~~~vl~dsgv~~~~~~~---~y~~~r~~~~~~~~~v~~~a~~~ 764 (953)
|||+++++|+.++++++||++.++ ++++++ .++.|||+||+++|+..++ +||.||.+|.. |++.
T Consensus 215 MDQ~asa~g~~~~al~iD~~~l~~-~~v~l~~~~~~~~~~vV~nS~v~h~l~~s~~~~Yn~Rr~ece~--------a~~~ 285 (468)
T PTZ00290 215 MDQFISAFAEEDKFMFLDCKSLTF-ESHDMTPLLGDGACFLLIDSMIKHDLLGGTAGMYNTVRSDQEG--------AQKK 285 (468)
T ss_pred hhHHHHHhCCCCcEEEEecCCCeE-EEeccCCCCCCCcEEEEEeCCCcchhccccchhhHHHHHHHHH--------HHHH
Confidence 999999999999999999998777 778774 4799999999999998765 99999988742 2233
Q ss_pred CcccCCCCCCCCCCCccchhhhHHHHhhhh-hHHhcC--C---------hhHHHHHHhhcCCccchhhhhhhhcCCCCCC
Q 002206 765 LPQSLPSSNGLNNIEPEVDGVELLEAEASL-DYLCNL--S---------PHRFEALYAKNIPESIVGEEFSKNYGDHNDP 832 (953)
Q Consensus 765 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~l~~~--~---------~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~ 832 (953)
|.+.. ++ .+ ..||++ . +..+...+...+|+
T Consensus 286 L~~~~---------------l~------~~~~~Lrd~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------- 327 (468)
T PTZ00290 286 IGKHR---------------YR------GKPFTFSDLVRNPKKYTFDGDVVAFMESCKPLMTP----------------- 327 (468)
T ss_pred hcccc---------------cc------chhhhHHHhhhccccccccccHHHHHHHhhhcCCH-----------------
Confidence 22110 00 01 123333 1 11221111111211
Q ss_pred ceecCCCcccccccccccccchhhhHHHHHHHHHccC---ChHHHHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHh
Q 002206 833 VTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAA---SDDQLTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEI 908 (953)
Q Consensus 833 ~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~---~~~~~~~lG~lm~~sh~sl~~-~~vs~~~ld~lv~~a~~~ 908 (953)
.+++|++|+++||.||.+|+++|++.. ...+++.||+||++||.||++ |+|||||||.||+.+.+.
T Consensus 328 ----------~~~~Ra~HVitEn~RV~~a~~al~~~~~l~~~~~~~~lG~lm~~sh~sL~~~~~vS~~elD~lv~~~~~~ 397 (468)
T PTZ00290 328 ----------GEFERGTYNIMEQIRTLEFIKLNDPELPLSREERFRKAGEILNAGHQGMRDLMKITTPELDFIHELINEE 397 (468)
T ss_pred ----------HHHHHHHHHhhHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 367899999999999999999996210 124799999999999999999 799999999999987541
Q ss_pred hhcccccCCCCCcccccccccccCceEEEeccC-Chh
Q 002206 909 QHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN-SLR 944 (953)
Q Consensus 909 ~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~-~~~ 944 (953)
.|++||||||||||||+++|.+. .++
T Consensus 398 ----------~G~~GaRlTGaG~GGc~i~Lv~~~~~~ 424 (468)
T PTZ00290 398 ----------KGVAGGRMMGGGFGGCIILLLKKNAVD 424 (468)
T ss_pred ----------CCCcEEEEecCCCceEEEEEechhhHH
Confidence 69999999999999999888654 444
No 4
>PLN02521 galactokinase
Probab=100.00 E-value=1e-60 Score=550.96 Aligned_cols=390 Identities=24% Similarity=0.378 Sum_probs=281.1
Q ss_pred HHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCc-chhhhhhhhhhcccCCCCCCCC
Q 002206 482 RERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISP-SKQRLWKHALARHNDKGQGPMP 560 (953)
Q Consensus 482 ~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 560 (953)
+-...|...||.+ |.++++|||||||||||+||+|++||||||+++++++++++++ +++
T Consensus 34 ~l~~~F~~~fg~~-p~~~~~APGRVnLiGEHtDy~gg~vLp~AI~~~~~v~~~~~~~~~~i------------------- 93 (497)
T PLN02521 34 RLKAAFVEVYGAK-PDLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRRAEGSKKL------------------- 93 (497)
T ss_pred HHHHHHHHHHCCC-CCEEEECCceEEEeccceeecCCeEEEEEEcCcEEEEEEEcCCCCEE-------------------
Confidence 3455678999975 5688999999999999999999999999999999999999976 443
Q ss_pred eEEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHH----HHHHHHHHHHhCCCC--CCCEEE
Q 002206 561 VLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYV----AGTILVLMTELGVRF--EDSISM 634 (953)
Q Consensus 561 ~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~----~~~~~~~l~~~g~~~--~~g~~i 634 (953)
++.+.+..+ +.+.++++... + .......|.+|+ ++++.. +.+.+..+ ..|+++
T Consensus 94 --~i~s~~~~~----~~~~~~~~~~~----~----------~~~~~~~W~nYv~~~~~gv~~~-l~~~~~~~~~~~g~~i 152 (497)
T PLN02521 94 --RIANVNDKY----TTCTFPADPDQ----E----------VDLANHKWGNYFICGYKGVFEF-LKSKGVDVGPPVGLDV 152 (497)
T ss_pred --EEEECCCCC----CceeeecCccc----c----------cccccccHHHHHHHHHHHHHHH-HHHhccccCCCCCeEE
Confidence 333322111 01122221100 0 012335799999 555554 33444432 149999
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCcc
Q 002206 635 LVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE 714 (953)
Q Consensus 635 ~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~ 714 (953)
.|+|+||+|+|||||||++||++.|++.+++.++++++++++|+.+|+ +.|.+||+|||+++++|+.|+++++||++++
T Consensus 153 ~i~s~IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~~E~-~~g~~~g~mDq~as~~g~~g~al~~d~~~l~ 231 (497)
T PLN02521 153 VVDGTVPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCER-HIGTQSGGMDQAISIMAQQGVAKLIDFNPVR 231 (497)
T ss_pred EEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhC-ccCCCCChHHHHHHHhcCCCcEEEEecCCCc
Confidence 999999999999999999999999999999999999999999999999 5788888899999999999999999999987
Q ss_pred ceeeeecCCCeEEEEEeCCCccc---cCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHh
Q 002206 715 LLGVVEIPSHIRFWGIDSGIRHS---VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAE 791 (953)
Q Consensus 715 ~~~~~~~p~~~~~vl~dsgv~~~---~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 791 (953)
+ +.+++|.++.|||+||++++. +++++||.||.+|.. |+++|.++.+.....+. ..+..|++
T Consensus 232 ~-~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~--------Aa~~L~~~~~~~~~~~~-----~~~~~Lrd- 296 (497)
T PLN02521 232 A-TDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRL--------AAIVLAVKLGMSAEEAI-----SKVKTLSD- 296 (497)
T ss_pred e-EEeecCCCcEEEEEECCCcccccccccccccHHHHHHHH--------HHHHHHhhcCCcchhcc-----cccCCHHH-
Confidence 6 789999899999999997765 777899999988854 33443332211000000 00011110
Q ss_pred hhhhHHh-----cCChhHHHHHHhhcCCcc---------chhhhhhhhcCCCCCCceecCCCcccccccccccccchhhh
Q 002206 792 ASLDYLC-----NLSPHRFEALYAKNIPES---------IVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFR 857 (953)
Q Consensus 792 ~~~~~l~-----~~~~~~~~~~~~~~lp~~---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~R 857 (953)
+..+. +.+...+.......+++. +.+..+.+.+.++.+..++++.++.|.+++|++|+++||.|
T Consensus 297 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ra~Hvv~E~~R 374 (497)
T PLN02521 297 --VEGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHFKLHQRAVHVYSEAKR 374 (497)
T ss_pred --HHHHHhhhcccccchhhHHHhhhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccchhHHhhhhhheecHHHH
Confidence 00000 000000000001111111 11111222223334456666677888999999999999999
Q ss_pred HHHHHHHHHccCCh-HHHHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceE
Q 002206 858 VKAFKALLTAAASD-DQLTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTI 935 (953)
Q Consensus 858 v~~~~~~l~~~~~~-~~~~~lG~lm~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v 935 (953)
|.+|+++|+++.++ ++++.||+||++||.|||+ ++||||++|.|+++|++ .|++||||||||||||+
T Consensus 375 V~~~~~al~~~~~~~~~~~~lg~lm~~sh~slr~~~~vS~~elD~lv~~a~~-----------~Ga~GaRltGaG~GG~~ 443 (497)
T PLN02521 375 VHAFRDTVSSSLSEEEKLKKLGDLMNESHYSCSVLYECSCPELEELVKVCRD-----------NGALGARLTGAGWGGCA 443 (497)
T ss_pred HHHHHHHHHhcCccchHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHh-----------cCCcEEEECCCCCCeEE
Confidence 99999999986433 3599999999999999998 59999999999999998 69999999999999999
Q ss_pred EEeccC
Q 002206 936 CVIGRN 941 (953)
Q Consensus 936 ~~l~~~ 941 (953)
++|.+.
T Consensus 444 i~lv~~ 449 (497)
T PLN02521 444 VALVKE 449 (497)
T ss_pred EEEECH
Confidence 888665
No 5
>PRK05322 galactokinase; Provisional
Probab=100.00 E-value=1.5e-58 Score=524.30 Aligned_cols=345 Identities=26% Similarity=0.384 Sum_probs=279.0
Q ss_pred HHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeE
Q 002206 483 ERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVL 562 (953)
Q Consensus 483 ~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 562 (953)
....|...||.+ |..+++|||||+|+|||+||+|++||++||++++++++++++++++++
T Consensus 6 ~~~~f~~~fg~~-p~~~~~APgRv~L~GEH~d~~g~~vl~~AI~~~~~v~~~~~~~~~i~i------------------- 65 (387)
T PRK05322 6 LKKKFAEVFGEE-AEDVFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARKRDDKKVRL------------------- 65 (387)
T ss_pred HHHHHHHHhCCC-CceEEEcCceeEecccceeecCceeeeeeccceEEEEEEECCCCEEEE-------------------
Confidence 344577889975 567899999999999999999999999999999999999998765443
Q ss_pred EEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCC
Q 002206 563 QIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPE 642 (953)
Q Consensus 563 ~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~ 642 (953)
.+.+. . ....+.++++++. ......|.+|+++++..+ +..+.++..||++.|.|+||+
T Consensus 66 --~s~~~--~-~~~~~~~~~~~~~----------------~~~~~~w~~y~~gvi~~l-~~~~~~~~~g~~i~i~s~iP~ 123 (387)
T PRK05322 66 --YSANF--E-DLGIIEFDLDDLS----------------FDKEDDWANYPKGVLKFL-QEAGYKIDHGFDILIYGNIPN 123 (387)
T ss_pred --EECCC--C-CCceEEEeccccC----------------CCCccchHHHHHHHHHHH-HHcCCCCCCCEEEEEecCCCC
Confidence 33211 0 0011233332210 122357999999998864 556654337999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecC
Q 002206 643 GKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP 722 (953)
Q Consensus 643 g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p 722 (953)
|+|||||||++||++.|++.+++.++++++++++|+.+|+.+||+|||+|||+++++|+.++++++||++.+. +.+++|
T Consensus 124 gsGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~sG~mDq~as~~G~~~~~~~~d~~~~~~-~~~~~~ 202 (387)
T PRK05322 124 GAGLSSSASIELLTGVILKDLFNLDLDRLELVKLGQKTENEFIGVNSGIMDQFAIGMGKKDHAILLDCNTLEY-EYVPLD 202 (387)
T ss_pred CCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhccCCCCcchHHHHHHHhccCCeEEEEecCCCce-EEeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988765 677776
Q ss_pred -CCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCC
Q 002206 723 -SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLS 801 (953)
Q Consensus 723 -~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 801 (953)
.++.|+|+|||++|++.+++||.||.+|.. +++. ++....+..|++++
T Consensus 203 ~~~~~lvv~dsg~~~~~~~~~yn~r~~e~~~---a~~~----------------------------l~~~~~~~~l~~~~ 251 (387)
T PRK05322 203 LGDYVIVIMNTNKRRELADSKYNERRAECEK---ALEE----------------------------LQKKLDIKSLGELT 251 (387)
T ss_pred CCCeEEEEEECCCccccCcchhhHHHHHHHH---HHHH----------------------------HhhhcCccchhcCC
Confidence 467899999999999999999999988842 2222 11111234577777
Q ss_pred hhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHH
Q 002206 802 PHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELL 881 (953)
Q Consensus 802 ~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm 881 (953)
+++++... ..++ |+ .+++|++|++.|+.||.++.++|+++ |++.||+||
T Consensus 252 ~~~~~~~~-~~~~----------------~~----------~~~~r~~h~v~e~~r~~~~~~al~~~----d~~~lg~lm 300 (387)
T PRK05322 252 EEEFDEYS-YLIK----------------DE----------TLLKRARHAVTENQRTLKAVKALKAG----DLEKFGRLM 300 (387)
T ss_pred HHHHHHHH-hhcC----------------CH----------HHHHHHHHHHHHHHHHHHHHHHHHhC----CHHHHHHHH
Confidence 77765531 2221 00 36789999999999999999999996 999999999
Q ss_pred HHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccCC
Q 002206 882 YQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNS 942 (953)
Q Consensus 882 ~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~~ 942 (953)
++||.+|++ |++|+|++|.|++++++ ..|++||||||||||||+++|.+.+
T Consensus 301 ~~sh~~L~~~y~~s~~eld~lv~~a~~----------~~Ga~garlsGaG~GG~vial~~~~ 352 (387)
T PRK05322 301 NASHVSLRDDYEVTGLELDTLVEAAWK----------QEGVLGARMTGAGFGGCAIAIVKKD 352 (387)
T ss_pred HHhhHHHHhhhcCCCHhHHHHHHHHHh----------cCCccEEEEecCCCceEEEEEEcHH
Confidence 999999996 89999999999999974 1699999999999999998886643
No 6
>PRK05101 galactokinase; Provisional
Probab=100.00 E-value=1.9e-57 Score=515.01 Aligned_cols=339 Identities=28% Similarity=0.447 Sum_probs=274.9
Q ss_pred HHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCe
Q 002206 482 RERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPV 561 (953)
Q Consensus 482 ~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 561 (953)
+-...|...||.+ |.++++|||||||+|||+||+|++||++|||++++|.+++++++++++
T Consensus 6 ~~~~~f~~~fg~~-p~~~~~APgRvnL~GeH~Dy~gg~vL~~AId~~~~v~i~~~~~~~i~v------------------ 66 (382)
T PRK05101 6 KTQSLFAQQFGYP-PTHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRIVRV------------------ 66 (382)
T ss_pred HHHHHHHHHhCCC-CCeEEECCceEEEeccceeecCCEEEEEEecccEEEEEEECCCCEEEE------------------
Confidence 4566778889975 568999999999999999999999999999999999999988765443
Q ss_pred EEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCC
Q 002206 562 LQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVP 641 (953)
Q Consensus 562 i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP 641 (953)
.+.+.+ . ....++++. ++ ...+...|.+|+++++..+. ..+... .|+++.|.|+||
T Consensus 67 ---~s~~~~--~--~~~~~~~~~------~~---------~~~~~~~w~~yv~~~~~~l~-~~~~~~-~g~~i~i~~~iP 122 (382)
T PRK05101 67 ---IAADYD--N--QQDEFSLDA------PI---------VPHPEQQWANYVRGVVKHLQ-ERNPDF-GGADLVISGNVP 122 (382)
T ss_pred ---EECCCC--C--CceEEecCc------cc---------ccCCCCchHHHHHHHHHHHH-HhCCCC-CCeEEEEeCCCC
Confidence 332110 0 011223221 11 01334689999999988754 344443 699999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeec
Q 002206 642 EGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI 721 (953)
Q Consensus 642 ~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~ 721 (953)
+|+|||||||++||++.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++|+.++++++++++.++ +++++
T Consensus 123 ~gaGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~~Dq~~s~~G~~~~~~~~d~~~~~~-~~~~~ 201 (382)
T PRK05101 123 QGAGLSSSASLEVAVGQTFQQLYHLPLSGAEIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLET-KAVPM 201 (382)
T ss_pred CCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccHHHHHHHcCCCCeEEEEEcCCCce-EEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988766 67889
Q ss_pred CCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCC
Q 002206 722 PSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLS 801 (953)
Q Consensus 722 p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 801 (953)
|.++.|+|+|||++|+...+.||+|+.+|.. |++.+ .++.|++++
T Consensus 202 ~~~~~~vv~~sg~~~~l~~~~y~~r~~e~~~--------A~~~l---------------------------~~~~l~~~~ 246 (382)
T PRK05101 202 PEGVAVVIINSNVKRGLVDSEYNTRRQQCET--------AARFF---------------------------GVKALRDVT 246 (382)
T ss_pred CCCcEEEEEeCCCCccccccchhHHHHHHHH--------HHHHh---------------------------ChHhhhcCC
Confidence 9899999999999999888999998877631 22211 122355555
Q ss_pred hhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHH
Q 002206 802 PHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELL 881 (953)
Q Consensus 802 ~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm 881 (953)
+++++... ..+|+ .+++|+.|+++|++||.+++++|+++ |++.||+||
T Consensus 247 ~~~~~~~~-~~l~~---------------------------~~~~r~~h~i~E~~rv~~a~~al~~~----d~~~lG~Lm 294 (382)
T PRK05101 247 LEQFNAVA-AELDP---------------------------VVAKRARHVITENARTLEAASALAAG----DLKRMGELM 294 (382)
T ss_pred HHHHHHHH-hhCCH---------------------------HHHHHHHHHhHHHHHHHHHHHHHHcC----CHHHHHHHH
Confidence 55554321 22322 25679999999999999999999996 999999999
Q ss_pred HHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCc-ccccccccccCceEEEeccC
Q 002206 882 YQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTL-FGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 882 ~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~-lGakltGaG~GG~v~~l~~~ 941 (953)
++||.+||+ ++|||||+|.|+++|++. .|+ +||||||||||||+++|.++
T Consensus 295 ~~sh~~lr~~~~vS~~eld~lv~~a~~~----------~Ga~gGakltGaG~GG~~ial~~~ 346 (382)
T PRK05101 295 AESHASMRDDFEITVPQIDTLVEIVKAV----------IGDQGGVRMTGGGFGGCIVALVPE 346 (382)
T ss_pred HHHhHHHHhhcCCCCHhHHHHHHHHHhc----------cCCcceEEeccCCCccEEEEEEcH
Confidence 999999997 899999999999999982 376 58899999999999988765
No 7
>TIGR00131 gal_kin galactokinase. The galactokinases found by this model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity.
Probab=100.00 E-value=1.2e-56 Score=511.74 Aligned_cols=342 Identities=25% Similarity=0.370 Sum_probs=271.7
Q ss_pred HHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEE
Q 002206 484 RKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQ 563 (953)
Q Consensus 484 ~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~ 563 (953)
...|...||.+ |+++++|||||+|+|||+||+|++||++||++++++.+++++++++++
T Consensus 5 ~~~f~~~fg~~-p~~~~~APgrv~L~GeH~dy~g~~vl~~AI~~~~~v~~~~~~~~~i~i-------------------- 63 (386)
T TIGR00131 5 QKIFASAFGAK-PDFTARAPGRVNLIGEHTDYNDGSVLPCAIDFGTLCAVAVRDDKNVRI-------------------- 63 (386)
T ss_pred HHHHHHHHCCC-CCEEEECCcceEeeccceeeCCceEEeeEeeccEEEEEEECCCCeEEE--------------------
Confidence 45677889975 568899999999999999999999999999999999999998765443
Q ss_pred EEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCC
Q 002206 564 IVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEG 643 (953)
Q Consensus 564 i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g 643 (953)
.+.+. ......+.+++ |.. ...+..|.+|+++++..+.+. +.....|+++.|.|+||+|
T Consensus 64 -~~~~~--~~~~~~~~~~~--------~~~---------~~~~~~w~~y~~~~~~~~~~~-~~~~~~g~~i~i~s~iP~g 122 (386)
T TIGR00131 64 -YLANA--DNKFAERSLDL--------PLD---------GSEVSDWANYFKGVLHVAQER-FNSFPLGADIVCSGNVPTG 122 (386)
T ss_pred -EECCC--CCcceEEECCC--------CCC---------CCCCCCcHhHHHHHHHHHHHh-cCCCCCceEEEEECCCCCC
Confidence 32211 00001122221 110 122368999999998876543 4333369999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCC
Q 002206 644 KGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS 723 (953)
Q Consensus 644 ~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~ 723 (953)
+|||||||++||++.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++||.+++++++|++.++ .++++|.
T Consensus 123 sGLgSSAA~~vA~~~al~~~~~~~~~~~~l~~~a~~~E~~~~G~~~g~~Dq~~s~~G~~~~~l~~~~~~~~~-~~~~~~~ 201 (386)
T TIGR00131 123 SGLSSSAAFECAVGAVLQNMGHLPLDSKQILLRIQVAENHFVGVNCGIMDQAASVLGKEDHALLVECRSLKA-TPFKFPQ 201 (386)
T ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhcCccCCCcchHHHHHHHhccCCcEEEEEcCCCce-eeecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999988665 6788886
Q ss_pred -CeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCCh
Q 002206 724 -HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 802 (953)
Q Consensus 724 -~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 802 (953)
++.|+|+|||++|+|..+.||.||.+|.. |++.+..+ ....++++.+
T Consensus 202 ~~~~lvv~~s~~~~~t~~~~y~~r~~e~~~--------a~~~l~~~------------------------~~~~lr~~~~ 249 (386)
T TIGR00131 202 LGIAFVIANTNVKRTLAPSNYNTRRQECTT--------AANFLAAT------------------------DKGALRDFMN 249 (386)
T ss_pred CCeEEEEEeCCCccccccchhHHHHHHHHH--------HHHHhccc------------------------cccchhhCCH
Confidence 89999999999999999999999887742 22222110 0113455555
Q ss_pred hHHHHH--HhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHH
Q 002206 803 HRFEAL--YAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGEL 880 (953)
Q Consensus 803 ~~~~~~--~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~l 880 (953)
+.+... ....+.+ .+++|++|+++|+.||.+++++|+++ |++.||+|
T Consensus 250 ~~~~~~~~~~~~~~~---------------------------~~~~r~~h~v~e~~rv~~~~~al~~~----d~~~lG~l 298 (386)
T TIGR00131 250 EYFARYIARLTKMLP---------------------------LVEERAKHVVSENLRVLKAVKAMKDN----DFKQFGAL 298 (386)
T ss_pred HHHhhhHhhHhhcCH---------------------------HHHhhHheeehHHHHHHHHHHHHHhC----cHHHHHHH
Confidence 544321 0011111 24568999999999999999999986 89999999
Q ss_pred HHHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 881 LYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 881 m~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|++||.+|++ +++|||++|.|++.+.. .+|++||||||||||||+++|.++
T Consensus 299 m~~sh~~l~~~~~vs~peld~lv~~a~~----------~~GAlGakltGaG~GG~vial~~~ 350 (386)
T TIGR00131 299 MNESHASCDDDYECTCPEIDELVCSAAL----------VNGSGGSRMTGAGFGGCTVHLVPN 350 (386)
T ss_pred HHHhhHHHHHhcCCCCHHHHHHHHHHHh----------cCCCcEEEEecCCCceEEEEEEcH
Confidence 9999999998 79999999999988644 169999999999999999988764
No 8
>PRK00555 galactokinase; Provisional
Probab=100.00 E-value=5.6e-56 Score=499.07 Aligned_cols=321 Identities=27% Similarity=0.386 Sum_probs=260.2
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCc
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (953)
++++|||||||||||+||+||+|||+||+++++|++++++++++++ .+... + ..
T Consensus 3 ~~~~APGRv~LiGEH~dy~~g~vl~~Ai~~~~~v~~~~~~~~~i~i---------------------~s~~~---~--~~ 56 (363)
T PRK00555 3 VRYAAPGRINLIGEHTDYNLGFALPIALPQRTVVTFTPEHTDAITA---------------------SSDRA---D--GS 56 (363)
T ss_pred EEEEcCceEEeecccccCCCCeEEeEEeeccEEEEEEECCCCEEEE---------------------EECCC---C--Cc
Confidence 5789999999999999999999999999999999999998875544 33211 0 01
Q ss_pred eeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 002206 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (953)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~ 657 (953)
++++++.. ......|.+|+++++..+ ++.|..+ .|+++.|.|+||+|+|||||||++||++
T Consensus 57 ~~~~~~~~-----------------~~~~~~w~~y~~gv~~~l-~~~g~~~-~g~~i~i~s~iP~g~GLgSSAA~~va~~ 117 (363)
T PRK00555 57 ARIPLDTT-----------------PGQVTGWAAYAAGVIWAL-RGAGHPV-PGGAMSITSDVEIGSGLSSSAALECAVL 117 (363)
T ss_pred eEEecCCC-----------------CCCCcchHHHHHHHHHHH-HHcCCCC-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 22332210 122367999999988764 5667665 6999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCC---CeEEEEEeCCC
Q 002206 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS---HIRFWGIDSGI 734 (953)
Q Consensus 658 ~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~---~~~~vl~dsgv 734 (953)
.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++||.|++++++|++... +++++|+ .+.|+++|||+
T Consensus 118 ~al~~~~~~~~~~~~la~~a~~aE~~~~G~~~G~~Dq~as~~G~~~~~~~~d~~~~~~-~~v~~~~~~~~~~lvv~~s~~ 196 (363)
T PRK00555 118 GAVGAATGTRIDRLEQARLAQRAENEYVGAPTGLLDQLAALFGAPKTALLIDFRDLTV-RPVAFDPDAAGVVLLLMDSRA 196 (363)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCChhHHHHHHhCCCCeEEEEEcCCCcE-EEeccCCCcCceEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999999999987655 6777764 36799999999
Q ss_pred ccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCC
Q 002206 735 RHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIP 814 (953)
Q Consensus 735 ~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp 814 (953)
+|.+.+.+||.||.+|.. +++.+. .+.++++.++.++. +....+
T Consensus 197 ~~~~~~~~y~~rr~~~~~--------~~~~~~---------------------------~~~lr~~~~~~~~~-~~~~~~ 240 (363)
T PRK00555 197 RHRHAGGEYAARRASCER--------AAADLG---------------------------VSSLRAVQDRGLAA-LGAIAD 240 (363)
T ss_pred cccccchhhHHHHHHHHH--------HHHHhC---------------------------ccchhcCCHHHHHH-HHhcCC
Confidence 999999999999877631 111111 11244444433322 111110
Q ss_pred ccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhh-cCC
Q 002206 815 ESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSA-CGL 893 (953)
Q Consensus 815 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~-~~v 893 (953)
+ ..++|++|+++|+.||.+++++|+++ |++.||++|+++|.+||+ ++|
T Consensus 241 -----------------~----------~~~~r~~h~~~e~~~v~~~~~al~~g----d~~~lg~lm~~~h~~lr~~~~v 289 (363)
T PRK00555 241 -----------------P----------IDARRARHVLTENQRVLDFAAALADS----DFTAAGQLLTASHASMRDDFEI 289 (363)
T ss_pred -----------------h----------HHHHHHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHhhHHHHhhcCC
Confidence 0 24679999999999999999999996 999999999999999995 899
Q ss_pred CCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccCC
Q 002206 894 GSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNS 942 (953)
Q Consensus 894 s~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~~ 942 (953)
|||++|.|++.+++ .|++|+||||||||||+++|.+.+
T Consensus 290 S~~~ld~l~~~a~~-----------~Ga~GaklsGaG~Gg~vial~~~~ 327 (363)
T PRK00555 290 TTERIDLIADSAVR-----------AGALGARMTGGGFGGCVIALVPAD 327 (363)
T ss_pred CChhHHHHHHHHHh-----------cCCeEEEECCCCccCeEEEEEchh
Confidence 99999999999998 699999999999999999886653
No 9
>PRK03817 galactokinase; Provisional
Probab=100.00 E-value=9.9e-48 Score=433.49 Aligned_cols=312 Identities=28% Similarity=0.475 Sum_probs=251.1
Q ss_pred EEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCce
Q 002206 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (953)
Q Consensus 499 ~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (953)
.++|||||+|+|||+||+||+||++|||+++++.+++++ + +.+.+.+ +.. .+
T Consensus 2 ~~~APgrv~L~Geh~d~~~g~~l~~aI~~~~~v~~~~~~--~---------------------~~i~~~~--~~~---~~ 53 (351)
T PRK03817 2 KVKSPGRVNLIGEHTDYNDGYVLPFAINLYTFLEIEKSE--K---------------------FIFYSEN--FNE---EK 53 (351)
T ss_pred EEEeeeeEEEeccceeeCCCeEEEEEecCcEEEEEEeCC--e---------------------EEEEECC--CCC---cE
Confidence 478999999999999999999999999999999998763 2 2233221 100 12
Q ss_pred eccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002206 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (953)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~ 658 (953)
+++++++ .....|.+|+.+++..+ ++.+... .|++|.|.|+||+++|||||||++||++.
T Consensus 54 ~~~~~~~------------------~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~i~s~iP~~~GLgSSaa~~va~~~ 113 (351)
T PRK03817 54 TFELDKL------------------EKLNSWADYIKGVIWVL-EKRGYEV-GGVKGKVSSNLPIGAGLSSSASLEVAVAY 113 (351)
T ss_pred EEeCCcc------------------CCCCchHHHHHHHHHHH-HHcCCCC-CCeEEEEeCCCCCCCCcCcHHHHHHHHHH
Confidence 2232221 12357999999998764 4556554 79999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCcccc
Q 002206 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (953)
Q Consensus 659 al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~ 738 (953)
|++.+++.++++++++++|..+|++++|.|+|+|||+++++|+.+.++++++++... ..+++|.+++|++++||+++.+
T Consensus 114 al~~~~~~~~~~~~l~~~a~~~E~~~~g~~~g~~D~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~vv~~sg~~~~~ 192 (351)
T PRK03817 114 ALNEAYNLNLSKLELALLAREAENEFVGVPCGIMDQFAVAFGKKDHAIFLDTMTLEY-EYVPFPEDYEILVFDTGVKREL 192 (351)
T ss_pred HHHHHhCCCCCHHHHHHHHHHhcccccCCCCcCchhhheeeccCCEEEEEecCCCce-EEEecCCCcEEEEEeCCCcccc
Confidence 999999999999999999999999999999999999999999988888999877554 6788888999999999999988
Q ss_pred CCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccch
Q 002206 739 GGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIV 818 (953)
Q Consensus 739 ~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~ 818 (953)
.+..||.++..+.. +.+.+.. ..+++++.+.+ ..+|+
T Consensus 193 ~~~~~~~~~~~~~~--------~~~~l~~---------------------------~~~~~~~~~~~-----~~l~~--- 229 (351)
T PRK03817 193 ASSEYNERRQECEE--------ALKILGK---------------------------KSSKEVTEEDL-----SKLPP--- 229 (351)
T ss_pred ccchhHHHHHHHHH--------HHHHhCc---------------------------cchhcCCHHHH-----HhCCH---
Confidence 88899987755421 1111110 11222221111 12332
Q ss_pred hhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhh-cCCCCch
Q 002206 819 GEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSA-CGLGSDG 897 (953)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~-~~vs~~~ 897 (953)
.+++|+.|+++|++||.+++.+|+++ |++.||++|++||.++++ +++|+|+
T Consensus 230 ------------------------~~~~~~~~~v~e~~r~~~~~~al~~~----d~~~lg~l~~~s~~~l~~~~~~s~p~ 281 (351)
T PRK03817 230 ------------------------LLRKRAGYVLRENERVLKVRDALKEG----DIETLGELLTESHWDLADNYEVSCEE 281 (351)
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHhhcCCCcHH
Confidence 24568999999999999999999996 999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 898 TDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 898 ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
+|+|++++++ .|++|+|||||||||||++|.++
T Consensus 282 ld~l~~~a~~-----------~GalGaklsGaG~Gg~vlal~~~ 314 (351)
T PRK03817 282 LDFFVEFALE-----------LGAYGARLTGAGFGGSAIALVDK 314 (351)
T ss_pred HHHHHHHHHH-----------cCCCEEEEecCCCCeEEEEEEch
Confidence 9999999998 69999999999999999988654
No 10
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-48 Score=420.63 Aligned_cols=387 Identities=25% Similarity=0.325 Sum_probs=274.4
Q ss_pred HHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCe
Q 002206 482 RERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPV 561 (953)
Q Consensus 482 ~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 561 (953)
.+-.++...|+. +|.++++|||||||+|||+||+|+.|+|||||..+.+++.+++|.. +.
T Consensus 25 ~~~~~~~~~~~~-kp~~~a~~PgRVnLiGEHiDy~~~sVlpmaid~~~l~~~~~~~d~~-------------------~s 84 (489)
T KOG0631|consen 25 KEAGAFQAAYGA-KPVFVARAPGRVNLIGEHIDYCGYSVLPMAIDVDTLIAVAPSDDGI-------------------VS 84 (489)
T ss_pred HHHHHHHHhhCC-CceEEEecCCceecccceeeecCceeeeEEeeeeeEEEEEEcCCCc-------------------ee
Confidence 334455568996 5789999999999999999999999999999999999999998864 34
Q ss_pred EEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHh---CCCCCC--CEEEEE
Q 002206 562 LQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL---GVRFED--SISMLV 636 (953)
Q Consensus 562 i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~---g~~~~~--g~~i~i 636 (953)
|++.++++++. .+++++... .. .| ....+.|.+|+++.+..+.+.. +..... |+.+..
T Consensus 85 l~~tN~~~~f~----~~~~~~p~~-~~--~I----------~~~~~~w~ny~~C~~~g~h~~~~~~~~~~~~~vGl~~l~ 147 (489)
T KOG0631|consen 85 LRLTNFNPDFI----YFKYPLPSI-VW--QI----------DPDVSKWENYFYCGMKGFHEYIKRKPVRFEPPVGLSILN 147 (489)
T ss_pred EEEecCCCccc----eeeccCCch-hc--cc----------CCCccchhhhhccchHHHHHHHhccccccCCCcceEEEe
Confidence 66666665543 234443320 00 01 0123689999977766654444 333224 999999
Q ss_pred EeCCCCCCCCchHHHHHHHHHHHHHHHh-CCC--CCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEe--ec
Q 002206 637 SSAVPEGKGVSSSASVEVASMSAIAAAH-GLN--IHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV--CQ 711 (953)
Q Consensus 637 ~s~iP~g~GLgSSAA~~va~~~al~~~~-~~~--l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~--~~ 711 (953)
.+++|.|+||+||||+.++.+.|.+.+. |.+ +++.+++.++..+|. +.|.++|+|||+++++|..+++++++ +.
T Consensus 148 ~g~vPtgsgLsSsaa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~~ae~-~~G~~~gGmdq~asvl~~~~~Al~v~~~~~ 226 (489)
T KOG0631|consen 148 DGSVPTGSGLSSSAAWLCAAALATLKLNLGPNFIISKKDLATITVVAES-YIGLNSGGMDQAASVLAEKGHALLVDPYFT 226 (489)
T ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCcccchhhhhcceEEeec-ccCcCCCcHHHHHHHHHhcCceEEecccCC
Confidence 9999999999999999999999999998 887 889999999999885 68999999999999999999999999 45
Q ss_pred CccceeeeecCCCeEEEEEeCCCccc---cCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCC----------CCCC
Q 002206 712 PAELLGVVEIPSHIRFWGIDSGIRHS---VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNG----------LNNI 778 (953)
Q Consensus 712 ~~~~~~~~~~p~~~~~vl~dsgv~~~---~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~----------~~~~ 778 (953)
|.+. ..+++|..-.|++.+|.+.++ +..+.||.|..++- +|+..++.++..... .+..
T Consensus 227 Pf~~-~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlRv~E~~--------ia~~~la~k~~~~~~~~~~~~~~~~~~~~ 297 (489)
T KOG0631|consen 227 PFRR-SMLKLPDGGVFVIANSLVESNKAETAETNYNLRVVEGT--------IAAGELAAKILVELPAYILRYQLQRAWRG 297 (489)
T ss_pred cccc-ccccCCCCceEEEechhhhhcchhhhhhhhhceeEeee--------hhhHHHHHHhhcccHHHHHhhhhhhcccc
Confidence 7665 677888777999999998876 45678997754431 222222222111000 0000
Q ss_pred CccchhhhHHHHhhhhhHHh----cCChhHHHHHHhhcCCcc--chhhhhhhhcCCCCCCceecCCCccccccccccccc
Q 002206 779 EPEVDGVELLEAEASLDYLC----NLSPHRFEALYAKNIPES--IVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPI 852 (953)
Q Consensus 779 ~~~~~~~~~l~~~~~~~~l~----~~~~~~~~~~~~~~lp~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~ 852 (953)
...++.+.+. +.|. .++++.|.. .+.+.. .+-++|++.+.... ++ ....+++++|++|++
T Consensus 298 -~i~~~~~~~~-----~~l~~v~~~~~~e~f~~---ee~~~~l~~~~~~f~~~~~T~~-~v----~~~~~k~~~rakHv~ 363 (489)
T KOG0631|consen 298 -DIGEGYERAE-----EMLGLVEESLKPEGFNI---EEVARALGLDTEEFLQSLLTLA-AV----DLQVKKLYQRAKHVY 363 (489)
T ss_pred -ccchhHHHHH-----HHHHHHHhhcCcCCCCH---HHHHHHhccchHHHHHHhcccc-ch----hhHHHHHHHHHHHHH
Confidence 0001111000 0111 001110100 000100 11234455443311 11 123456889999999
Q ss_pred chhhhHHHHHHHHHccCChHH--HHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCccccccccc
Q 002206 853 YENFRVKAFKALLTAAASDDQ--LTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGG 929 (953)
Q Consensus 853 ~E~~Rv~~~~~~l~~~~~~~~--~~~lG~lm~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGa 929 (953)
.|+.||.++..++...+.+.+ ++.+|.|||+||.||+. +++||||+|+|+++|++ +|.+|||+|||
T Consensus 364 sea~rv~q~~~~~~~a~~~~d~~~~~~g~LmneS~~Sc~~~yEcscpel~qL~kiala-----------~g~~gaRlTGa 432 (489)
T KOG0631|consen 364 SEALRVLQEEKLCARAPGRADGFLADFGRLMNESHRSCDVLYECSCPELDQLCKIALA-----------NGGVGARLTGA 432 (489)
T ss_pred HHHHHHHHHHHHHhcCccchhhhHHHHHHHhhhhhHHHHHHHhcCCHhHHHHHHHHHh-----------cCCccceeecc
Confidence 999999999999998765444 89999999999999999 79999999999999998 67799999999
Q ss_pred ccCceEEEecc
Q 002206 930 GSGGTICVIGR 940 (953)
Q Consensus 930 G~GG~v~~l~~ 940 (953)
|||||.+.+.+
T Consensus 433 GwGGc~v~lvp 443 (489)
T KOG0631|consen 433 GWGGCTVALVP 443 (489)
T ss_pred ccccceeeecc
Confidence 99999888877
No 11
>PLN02677 mevalonate kinase
Probab=100.00 E-value=1.3e-42 Score=388.86 Aligned_cols=305 Identities=19% Similarity=0.305 Sum_probs=207.2
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCc----chhhhhhhhhhcccCCCCCCCCeEEEEecCCccCC
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISP----SKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 573 (953)
+.++|||||+|+|||+||+|++||++||++++++.+++++. +.+.+. +|++.+
T Consensus 3 i~v~apgk~~l~Geh~~~~g~~a~~~ai~~~~~~~~~~~~~~~~~~~i~~~--------------~~di~~--------- 59 (387)
T PLN02677 3 VKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVSLRFPPSAENDDTLKLQ--------------LKDLGL--------- 59 (387)
T ss_pred eEEeCCccEEEeeeeeeecCCeeeeeEeeceEEEEEEecCCCCCCCeEEEE--------------cCCCCc---------
Confidence 57899999999999999999999999999999999998632 122111 222221
Q ss_pred CCCceeccCCccccC---------CCCcch-----HhhhcccCC--CCC-CchH-HHHHHHHHHHHHHhCCCCCCCEEEE
Q 002206 574 RGPTFDMDLSDFMDE---------GKPMSY-----EKAKKYFDT--NPS-QKWA-AYVAGTILVLMTELGVRFEDSISML 635 (953)
Q Consensus 574 ~~~~~~~~l~~~~~~---------~~~~~~-----~~~~~~~~~--~~~-~~w~-~y~~~~~~~~l~~~g~~~~~g~~i~ 635 (953)
.++|+++++... ..+..+ +...+|... .+. ..+. +.+.+.+.-++ ... .. .++++.
T Consensus 60 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~flyl~~-~~~-~~-~~~~i~ 133 (387)
T PLN02677 60 ---EFSWPLARIKEALPDLGTPCPSTPTSCSEETLKSIAALVEEQNIPEAKIWLSSGVSAFLWLYT-SIL-GF-NPATVV 133 (387)
T ss_pred ---eEEechHhhhhhhccccccccccccccCHHHHHHHHHHHHhcCCcchhhhhhhHHHHHHHHHH-Hhc-cC-CCeEEE
Confidence 233433332100 011111 111222211 010 0110 01111111111 111 12 579999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHHHHHhCC-CC-------------CHHHHHHHHHHhhccccCCCCCccchhhhhccC
Q 002206 636 VSSAVPEGKGVSSSASVEVASMSAIAAAHGL-NI-------------HPRDLALLCQKVENHIVGAPCGVMDQMASACGE 701 (953)
Q Consensus 636 i~s~iP~g~GLgSSAA~~va~~~al~~~~~~-~l-------------~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg 701 (953)
|+|+||+|+|||||||++||++.||+.+++. ++ +.++++++|+.+|+.+||+|||+ |++++++||
T Consensus 134 I~S~lP~GaGLGSSAAv~Va~~~AL~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~A~~~E~~~hG~pSGi-D~a~s~~Gg 212 (387)
T PLN02677 134 VTSELPLGSGLGSSAAFCVALSAALLAASDSISVSTGGNGWSSLDETDLELVNKWAFEGEKIIHGKPSGI-DNTVSTYGN 212 (387)
T ss_pred EEccCCCCCCccHHHHHHHHHHHHHHHHhCCcccccccccccccChhHHHHHHHHHHHHHHHHhCCCCch-hHHHHhcCC
Confidence 9999999999999999999999999999983 22 23588899999999999999996 999999999
Q ss_pred cceEEEEeecCccceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCcc
Q 002206 702 ANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPE 781 (953)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~ 781 (953)
++.| +.... ++++.+.+++|+|+|||++|+|+ .+|+.++..
T Consensus 213 ---~I~f--~~~~~-~~l~~~~~l~llv~dTgv~~sT~---------------~lV~~V~~~------------------ 253 (387)
T PLN02677 213 ---MIKF--KSGEL-TRLQSNMPLKMLITNTRVGRNTK---------------ALVAGVSER------------------ 253 (387)
T ss_pred ---eEEE--cCCCc-eecCCCCCceEEEEECCCCCcHH---------------HHHHHHHHH------------------
Confidence 4444 44344 56777778999999999999986 456655311
Q ss_pred chhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHH
Q 002206 782 VDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAF 861 (953)
Q Consensus 782 ~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~ 861 (953)
++-.|+.++..+ +.+.+ -|.++
T Consensus 254 ----------------~~~~p~~~~~il------------------------------------~~~~~------i~~~a 275 (387)
T PLN02677 254 ----------------ALRHPDAMKSVF------------------------------------NAVDS------ISEEL 275 (387)
T ss_pred ----------------HHhCHHHHHHHH------------------------------------HHHHH------HHHHH
Confidence 111122221111 11111 25677
Q ss_pred HHHHHccCC-----hHHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEE
Q 002206 862 KALLTAAAS-----DDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTIC 936 (953)
Q Consensus 862 ~~~l~~~~~-----~~~~~~lG~lm~~sh~sl~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~ 936 (953)
.++|++... +++++.||++|+.+|..|+.+|||+|+||.+|+++++ .| +|||+||||+|||++
T Consensus 276 ~~al~~~~~~~~~~~~~~~~Lg~lm~~N~~LL~~LGVS~~~le~iv~~a~~-----------~~-~~AKlTGAGgGGC~I 343 (387)
T PLN02677 276 ATIIQSPAEDELSITEKEEKLKELMEMNQGLLQCMGVSHSSIETVLRTTLK-----------YK-LVSKLTGAGGGGCVL 343 (387)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-----------cC-CccccccCCCCCEEE
Confidence 788876211 1479999999999999999999999999999999987 45 799999999999999
Q ss_pred EeccC
Q 002206 937 VIGRN 941 (953)
Q Consensus 937 ~l~~~ 941 (953)
+|.++
T Consensus 344 aL~~~ 348 (387)
T PLN02677 344 TLLPT 348 (387)
T ss_pred EEccc
Confidence 88776
No 12
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism]
Probab=100.00 E-value=7.6e-42 Score=367.64 Aligned_cols=280 Identities=27% Similarity=0.364 Sum_probs=214.5
Q ss_pred EEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCce
Q 002206 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (953)
Q Consensus 499 ~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (953)
.++||||++|||||+++||.++|++||++++++.++.+++.++.+. +.+ +
T Consensus 2 ~~~aPgKliL~GEHAVVyG~pAI~~aI~~~~~v~~~~s~~~~~~i~---------------------~~~--~------- 51 (307)
T COG1577 2 SVSAPGKLILFGEHAVVYGYPAIAAAIDLRVTVTISESDSNKIVIE---------------------SSD--L------- 51 (307)
T ss_pred cccccccEEEEecceeeeCCchhheeeeeeEEEEEEecCCCcEEEe---------------------ccC--C-------
Confidence 4799999999999999999999999999999999999876543332 110 0
Q ss_pred eccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002206 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (953)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~ 658 (953)
+...+ . .+.. ..|+..++..+.+..+.....||+++|.|+||+|+|||||||++||++.
T Consensus 52 --~~~~~-------~---------~~~~---~~~~~~~v~~~~e~~~~~~~~~~~l~I~S~iP~g~GLGSSAAVsva~i~ 110 (307)
T COG1577 52 --KSSTL-------E---------RDED---EGYIQAAVRLASELLNQSSLKPFSLEIDSEIPIGAGLGSSAAVSVAVIK 110 (307)
T ss_pred --CCccc-------c---------cccc---chHHHHHHHHHHHHhcccCCCCeEEEEecCCCCCCCccHHHHHHHHHHH
Confidence 00000 0 0111 2566666665443344222379999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCcccc
Q 002206 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (953)
Q Consensus 659 al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~ 738 (953)
|++.+||..++++++++++.++|..+||+||| +|.+++++|| +++|.... .. +.+.++..-.|++.|||++++|
T Consensus 111 al~~~~g~~ls~~~l~~la~~~e~~vqG~~Sg-~D~a~~~~gg---~v~~~~~~-~~-~~l~~~~~~~~~I~~tg~~~sT 184 (307)
T COG1577 111 ALSAYFGVELSPEELAKLANKVELIVQGKASG-IDIATITYGG---LVAFKKGF-DF-EKLEIELLGTLVIGDTGVPGST 184 (307)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHcCCCCc-ccceEEEeCC---EEEEecCC-Cc-cccccccCCeEEEEEcCCcCcH
Confidence 99999999999999999999999999999999 5999999999 56665321 22 5666654448999999999988
Q ss_pred CCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccch
Q 002206 739 GGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIV 818 (953)
Q Consensus 739 ~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~ 818 (953)
. ++|..++. |+ ++.|+.+
T Consensus 185 ~---------------e~V~~V~~----------------------------------l~------------~~~~~~~- 202 (307)
T COG1577 185 K---------------ELVAGVAK----------------------------------LL------------EEEPEVI- 202 (307)
T ss_pred H---------------HHHHHHHH----------------------------------HH------------HhhhHHH-
Confidence 5 34544421 11 0111111
Q ss_pred hhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCCCCchH
Q 002206 819 GEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGT 898 (953)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs~~~l 898 (953)
....+.+. .-|.++..+++.+ |.+.||++|+.+|..|..+|||+|+|
T Consensus 203 ---------------------------~~~~~~ig--~~~~~a~~al~~~----d~e~lgelm~~nq~LL~~LgVs~~~L 249 (307)
T COG1577 203 ---------------------------DPILDAIG--ELVQEAEAALQTG----DFEELGELMNINQGLLKALGVSTPEL 249 (307)
T ss_pred ---------------------------HHHHHHHH--HHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHhcCcCcHHH
Confidence 00111112 2366788888885 89999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 899 DRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 899 d~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|+||+.+++ .|++|||+||||+|||+++|.++
T Consensus 250 ~~lv~~a~~-----------~Ga~gaKlTGAGgGGc~IaL~~~ 281 (307)
T COG1577 250 DELVEAARS-----------LGALGAKLTGAGGGGCIIALAKN 281 (307)
T ss_pred HHHHHHHHh-----------cCccccccccCCCCceEEEEecc
Confidence 999999998 68999999999999999999886
No 13
>TIGR00549 mevalon_kin mevalonate kinase. Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped.
Probab=100.00 E-value=8.1e-42 Score=373.39 Aligned_cols=273 Identities=26% Similarity=0.319 Sum_probs=208.9
Q ss_pred cCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCceecc
Q 002206 502 APGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMD 581 (953)
Q Consensus 502 APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~~~~ 581 (953)
|||||+|+|||+||+|++||++|||+++++.+++++++ ++ +.+.. +..+
T Consensus 1 aPgkv~L~GEH~v~~g~~al~~aI~~~~~~~~~~~~~~-~~---------------------i~~~~---------~~~~ 49 (273)
T TIGR00549 1 APGKIILFGEHAVVYGEPAIAAPIPLRTTVTVIESSDG-SF---------------------IESDL---------GRGS 49 (273)
T ss_pred CCceEEEEecChhccCCCeeEEEecccEEEEEEEcCCC-ce---------------------Eeccc---------cCCc
Confidence 79999999999999999999999999999999987654 22 22110 1001
Q ss_pred CCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHH
Q 002206 582 LSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIA 661 (953)
Q Consensus 582 l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~ 661 (953)
+..+ ......|.+|+++++..+. ..+ . .++++.++|+||.|+|||||||++||++.|++
T Consensus 50 ~~~~-----------------~~~~~~~~~~v~~~l~~~~-~~~--~-~~~~i~i~s~iP~g~GLGSSaa~~va~~~al~ 108 (273)
T TIGR00549 50 LDDA-----------------PQELDGLVSYIAEALSYFS-ELN--P-PPLEIEIDSEIPPGRGLGSSAAVAVALIRALA 108 (273)
T ss_pred HhHh-----------------hHHHHHHHHHHHHHHHHhh-ccC--C-CCEEEEEecCCCCCCCccHHHHHHHHHHHHHH
Confidence 0000 0123579999999887653 222 1 35999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccCCC
Q 002206 662 AAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGA 741 (953)
Q Consensus 662 ~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~ 741 (953)
.+++.++++++++++|+.+|+.++|.||| +||+++++|| +++++++... ..+..+.+..++++|||++++|..
T Consensus 109 ~~~~~~~~~~~l~~~a~~~E~~~~G~~sG-~D~~~~~~Gg---~~~~~~~~~~--~~~~~~~~~~lvl~~tg~~~~T~~- 181 (273)
T TIGR00549 109 DYFGSELSKEELAKLANEAEKIAHGKPSG-IDTATSTYGG---PVYFEKGEGE--FTKLISLDGYFVIADTGVSGSTKE- 181 (273)
T ss_pred HHhCCCCCHHHHHHHHHHHHHHhCCCCch-HhHHHHhcCC---eEEEEcCCCc--eeeccCCCeEEEEEECCCCCcHHH-
Confidence 99999999999999999999999999999 5999999999 4566654322 234445578999999999988752
Q ss_pred CCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhh
Q 002206 742 DYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEE 821 (953)
Q Consensus 742 ~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~ 821 (953)
+++.+. .+++..++.++..
T Consensus 182 --------------~~~~v~----------------------------------~~~~~~~~~~~~~------------- 200 (273)
T TIGR00549 182 --------------AVARVR----------------------------------QLLERFPELIDSI------------- 200 (273)
T ss_pred --------------HHHHHH----------------------------------HHHHhCHHHHHHH-------------
Confidence 121110 0111111111110
Q ss_pred hhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCCCCchHHHH
Q 002206 822 FSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRL 901 (953)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs~~~ld~l 901 (953)
.+++ ..++.+++++|+++ |++.||++|+++|..++++++|+|++|+|
T Consensus 201 -----------------------~~~~------~~~~~~~~~al~~~----d~~~lg~l~~~~~~~l~~~~vs~p~l~~l 247 (273)
T TIGR00549 201 -----------------------MDAI------GELTLEAKAALQDG----DVESLGELMNINQGLLKALGVSHPKLDQL 247 (273)
T ss_pred -----------------------HHHH------HHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 0011 23678899999986 89999999999999999999999999999
Q ss_pred HHHHHHhhhcccccCCCCCcccccccccccCceEEEe
Q 002206 902 VQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVI 938 (953)
Q Consensus 902 v~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l 938 (953)
++.+++ .|++||||||||+|||+++|
T Consensus 248 ~~~~~~-----------~Ga~gaklsGaG~GG~~i~l 273 (273)
T TIGR00549 248 VETARK-----------AGALGAKLTGAGGGGCMIAL 273 (273)
T ss_pred HHHHHH-----------CCCceeeeccCCCCceEEeC
Confidence 999998 68999999999999999875
No 14
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism]
Probab=100.00 E-value=6.3e-41 Score=349.73 Aligned_cols=307 Identities=21% Similarity=0.280 Sum_probs=202.7
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCc
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (953)
+.+||||||+|||||+++||.++++++|++|+|+.+++..++++.+. .|+|.+ +
T Consensus 5 l~vsaPGKvILfGEHAVVyg~~AlAaai~LrTyl~l~~san~~i~l~--------------l~di~~------------~ 58 (397)
T KOG1511|consen 5 LLVSAPGKVILFGEHAVVYGRTALAAAIDLRTYLRLQTSANDRILLQ--------------LPDISI------------E 58 (397)
T ss_pred eeecCCccEEEeccceeEECCceeEEEeecceeEEEEecCCCeEEEe--------------cccCCc------------e
Confidence 58999999999999999999999999999999999988877665442 233332 2
Q ss_pred eeccCCcccc-----------CCCCcc---hHhhhc---ccCCCCCCchHHHHHHHHHHHHHHhCCCC---CCCEEEEEE
Q 002206 578 FDMDLSDFMD-----------EGKPMS---YEKAKK---YFDTNPSQKWAAYVAGTILVLMTELGVRF---EDSISMLVS 637 (953)
Q Consensus 578 ~~~~l~~~~~-----------~~~~~~---~~~~~~---~~~~~~~~~w~~y~~~~~~~~l~~~g~~~---~~g~~i~i~ 637 (953)
+.|++.+|.. ...|.+ .+..++ .++......-..-+.+.+..++ -.-... .+.+++.++
T Consensus 59 ~~w~l~~~~~~l~~~~~~~~~~q~p~~~~~~e~~k~l~~l~~~~~~~~~~~a~~~~lYlf~-~l~~~~~g~lp~~~v~v~ 137 (397)
T KOG1511|consen 59 KAWSLADFNGALPEQRSTYESVQTPASEVRVELLKQLGGLLENQEKVKEHLAGLSFLYLFL-GLCLRAPGTLPALTVVVD 137 (397)
T ss_pred EEEEhhhhhhhhhhhhhhhhccCCcchhhhHHHHHHhhhhhhcchhhhHHHHHHHHHHHHH-HhhhcccCCCcceEEEEe
Confidence 3455544210 011110 111111 1111111110111112221111 111111 134999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCH-----------HHHHHHHHHhhccccCCCCCccchhhhhccCcceEE
Q 002206 638 SAVPEGKGVSSSASVEVASMSAIAAAHGLNIHP-----------RDLALLCQKVENHIVGAPCGVMDQMASACGEANKLL 706 (953)
Q Consensus 638 s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~-----------~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~ 706 (953)
|++|+|+|||||||++||++++++.++|.--++ +-+.+||++.|+.+||+|||+ |+++|+|||. +
T Consensus 138 SelP~GaGLGSSAa~sv~lAtall~~~g~i~~p~~~~~~~e~~l~Li~~WAf~gE~~iHGtpSGi-DnaV~t~Gg~---i 213 (397)
T KOG1511|consen 138 SELPLGAGLGSSAAISVALATALLRLAGLIPPPGSNLSLAENDLALINKWAFEGEKCIHGTPSGI-DNAVCTYGGL---I 213 (397)
T ss_pred ccCCCcCCcchhHHHHHHHHHHHHHHcccCCCCcchhccccchHHHHHHHHhccceeecCCCccc-chhhhccCce---E
Confidence 999999999999999999999999998862222 345799999999999999996 9999999993 3
Q ss_pred EEeecCc-cceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhh
Q 002206 707 AMVCQPA-ELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGV 785 (953)
Q Consensus 707 ~~~~~~~-~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 785 (953)
.|++. ++ +.+...+.++++++||.|+|+|+ ++|..+.
T Consensus 214 --~f~kg~~~-~~Lk~~~~L~illtnTrv~RnTk---------------~lVa~Vr------------------------ 251 (397)
T KOG1511|consen 214 --SFKKGVEI-ESLKHLPPLRILLTNTRVPRNTK---------------ALVAGVR------------------------ 251 (397)
T ss_pred --EeecCccc-eecccCCCceEEEEccccCccHH---------------HHHHHHH------------------------
Confidence 34444 33 56655568999999999999985 3444331
Q ss_pred hHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHH
Q 002206 786 ELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALL 865 (953)
Q Consensus 786 ~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l 865 (953)
.+.+ +.|+.|. .+...+.| -..++..++
T Consensus 252 ----------~~~~------------kfPevi~----------------------------~i~~aid~--is~ea~~il 279 (397)
T KOG1511|consen 252 ----------ELLE------------KFPEVIK----------------------------AIFDAIDE--ISLEAVWIL 279 (397)
T ss_pred ----------HHHH------------hhhHHHH----------------------------HHHHHHHH--HHHHHHHHH
Confidence 0111 2232220 00111111 134566666
Q ss_pred HccCCh---HHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 866 TAAASD---DQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 866 ~~~~~~---~~~~~lG~lm~~sh~sl~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
...+.+ ..-++|.+||..||..|..+|||+|++|.++..+++ .| +++||||||+|||++.|-+.
T Consensus 280 ~~e~~~~~~~~Eq~L~eLi~iNq~LL~alGVsH~~le~v~~~t~k-----------~g-i~sKLTGAGgGGc~itlL~~ 346 (397)
T KOG1511|consen 280 QRENDEFSSPKEQKLEELIRINQDLLDALGVSHPSLELVCTTTRK-----------LG-IHSKLTGAGGGGCVITLLKP 346 (397)
T ss_pred hcccccCCCcHHHHHHHHHHHhHHHHHHhCCCcHHHHHHHHHHHH-----------hC-cceecccCCCCceEEEEECC
Confidence 542211 122259999999999999999999999999999998 57 89999999999998776443
No 15
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents the low GC Gram-positive organism forms of the ERG8 type of phosphomevalonate kinase.
Probab=100.00 E-value=7.6e-40 Score=368.07 Aligned_cols=294 Identities=18% Similarity=0.184 Sum_probs=217.4
Q ss_pred EEEcCcceeccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCc
Q 002206 499 VARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (953)
Q Consensus 499 ~~~APGrv~l~GeH~d~~-g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (953)
.++|||||+|+|||+||+ |.+||++||++++++.++++++..+++ .+.+ +... .
T Consensus 2 ~~~APGKl~L~GEhavv~~G~pAl~~aI~~~~~v~i~~~~~~~~~i---------------------~s~~--~~~~--~ 56 (358)
T TIGR01220 2 VVHAPGKLFVAGEYAVVEPGNPAILVAVDRFVTVTVEDADGAADVI---------------------ISSD--LGPQ--P 56 (358)
T ss_pred eeecceeEEEeeeEEEecCCCeEEEEEEcCcEEEEEEeCCCCceEE---------------------EecC--CCCC--c
Confidence 578999999999999999 888999999999999999987654333 2221 1110 1
Q ss_pred eeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHH---HhCCCCCCCEEEEEEeCCCCC----CCCchHH
Q 002206 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMT---ELGVRFEDSISMLVSSAVPEG----KGVSSSA 650 (953)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~---~~g~~~~~g~~i~i~s~iP~g----~GLgSSA 650 (953)
+.+..+.. ++.. .......|.+|+++++..+.+ ..+... +|+++.|.|+||++ +||||||
T Consensus 57 ~~~~~~~~-----~~~~-------~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~-~g~~~~i~s~ip~~~g~k~GLGSSA 123 (358)
T TIGR01220 57 VGWRRHDG-----RLVV-------RDPDARSALAYVVSAIETVERYAGERNQKL-PALHLSVSSRLDEADGRKYGLGSSG 123 (358)
T ss_pred eEEEecCC-----ceee-------cccccccchHHHHHHHHHHHHHHHhcCCCC-CceEEEEecCCCCcCCCCCCccHHH
Confidence 12221110 0000 001124799999998875433 334444 68999999999994 6999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEe-ecC-----------------
Q 002206 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV-CQP----------------- 712 (953)
Q Consensus 651 A~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~-~~~----------------- 712 (953)
|++||++.|++.+++.++++++++++|+.+|+.+||++||. |+++++|||. +++. +.+
T Consensus 124 A~~Va~~~Al~~~~~~~l~~~~l~~lA~~~E~~~~g~~sg~-D~~a~~~GG~---i~~~~~~~~~~~~~~~~~~~~~~~~ 199 (358)
T TIGR01220 124 AVTVATVKALNAFYDLELSNDEIFKLAMLATAELQPKGSCG-DIAASTYGGW---IAYSTFDHDWVLQLARRVGVDRTLK 199 (358)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhhCCCCCcc-hhhhhhhCCE---EEEecCCHHHHhhhhhccchhhhhc
Confidence 99999999999999999999999999999999999999984 9999999994 4442 111
Q ss_pred -----ccceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhH
Q 002206 713 -----AELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVEL 787 (953)
Q Consensus 713 -----~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 787 (953)
..+ +++++|++++|+++|||++++|. ++|+.+....
T Consensus 200 ~~w~~~~~-~~l~~~~~~~l~v~~tg~~~~T~---------------~~v~~V~~~~----------------------- 240 (358)
T TIGR01220 200 APWPGLSI-RPLPAPKGLTLLIGWTGSPASTA---------------SLVSDVHRRK----------------------- 240 (358)
T ss_pred cCCCccce-eECCCCCCCEEEEEeCCCCcCcH---------------HHHHHHHHHh-----------------------
Confidence 112 56777778999999999999875 3444442110
Q ss_pred HHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHc
Q 002206 788 LEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTA 867 (953)
Q Consensus 788 l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~ 867 (953)
.-.++.++.. .+++. .-|.+++++|+.
T Consensus 241 -----------~~~~~~~~~~------------------------------------l~~~~------~i~~~~~~al~~ 267 (358)
T TIGR01220 241 -----------WRGSASYQRF------------------------------------LETST------DCVESAITAFET 267 (358)
T ss_pred -----------hcChHHHHHH------------------------------------HHHHH------HHHHHHHHHHHh
Confidence 0001111110 00111 126688999998
Q ss_pred cCChHHHHHHHHHHHHhhhhhhhc------CCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 868 AASDDQLTSLGELLYQCHYSYSAC------GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 868 ~~~~~~~~~lG~lm~~sh~sl~~~------~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
+ |++.||++|+++|..|+.+ +||+|++|+|++.+++ .|+ |||+||||+|||+++|.++
T Consensus 268 ~----d~~~lg~~~~~~~~lL~~l~~~~~~~vs~~~l~~li~~a~~-----------~ga-~aKlsGAGgGg~~ial~~~ 331 (358)
T TIGR01220 268 G----DITSLQKEIRRNRQELARLDDEVGVGIETEKLKALCDAAEA-----------YGG-AAKPSGAGGGDCGIAILDA 331 (358)
T ss_pred C----CHHHHHHHHHHHHHHHHHhhcccCCCcCCHHHHHHHHHHhh-----------cCc-eecCCCCCCcCEEEEEeCC
Confidence 6 8999999999999999987 9999999999999997 676 9999999999999998765
Q ss_pred C
Q 002206 942 S 942 (953)
Q Consensus 942 ~ 942 (953)
.
T Consensus 332 ~ 332 (358)
T TIGR01220 332 E 332 (358)
T ss_pred c
Confidence 4
No 16
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
Probab=100.00 E-value=6.2e-39 Score=386.29 Aligned_cols=302 Identities=17% Similarity=0.241 Sum_probs=216.6
Q ss_pred eEEEEcCcceeccccccc------cCCCeeeccccccc----eEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEe
Q 002206 497 IFVARAPGRLDVMGGIAD------YSGSLVLQMPIREA----CHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVS 566 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~d------~~g~~vl~~aI~~~----~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s 566 (953)
+++++|||||+|+|||+| |+||.||++||+++ +++.++++.+.++++.+.++
T Consensus 609 ~~~~~aPgRVnLiGghTDtPpy~~ynGG~VLn~AId~~g~~pi~v~v~~~~d~~irl~S~d~------------------ 670 (974)
T PRK13412 609 IVWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLAIELNGQPPLQVYVKPCSEPHIVLRSIDL------------------ 670 (974)
T ss_pred EEEEeCceEEeecccCcCCCcccCcCCcEEEEEEEeCCCCccEEEEEEECCCCeEEEEECCC------------------
Confidence 445699999999999999 99999999999996 99999999887666544321
Q ss_pred cCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHH-------------HHHHhCCCCCCCEE
Q 002206 567 YGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-------------LMTELGVRFEDSIS 633 (953)
Q Consensus 567 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~-------------~l~~~g~~~~~g~~ 633 (953)
... ..++ +.+++. ......+|.+|+++++.. .+++.......|++
T Consensus 671 -----~~~-~~v~-~~~~l~---------------~~~~~~~~~~~~K~al~~~G~~~~~~~~~~~~l~e~l~~~G~G~~ 728 (974)
T PRK13412 671 -----GAM-EVVR-TNEELR---------------DYKKVGSPFSIPKAALCLAGFAPRFSAESYASLEEQLKAFGSGIE 728 (974)
T ss_pred -----CCc-eEEe-cchhhc---------------ccccccchHhhhhhhheecccccccccchhHHHHHHHHhcCCCeE
Confidence 100 0111 111110 012236799999988641 12211111225999
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCc
Q 002206 634 MLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPA 713 (953)
Q Consensus 634 i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~ 713 (953)
|+|.|+||+|+|||||||++||++.|++.+++.++++++++++|+.+|+..||.+++ +||+++++|| ++++++.+.
T Consensus 729 I~i~s~IP~GsGLGSSAAlavA~l~AL~~~~g~~ls~~ela~~A~~~E~~lhg~~g~-qDq~~a~~GG---~~~i~~~~~ 804 (974)
T PRK13412 729 ITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNEICNRTLVLEQLLTTGGGW-QDQYGGVLPG---VKLLQTGAG 804 (974)
T ss_pred EEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHCCCCch-hhhhhHhcCC---eEEEEecCC
Confidence 999999999999999999999999999999999999999999999999998877765 8999999999 466665542
Q ss_pred -cc---eeeeecCC------CeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccch
Q 002206 714 -EL---LGVVEIPS------HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVD 783 (953)
Q Consensus 714 -~~---~~~~~~p~------~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~ 783 (953)
.. .++++.+. +-+++|+|||++|+++ .+|+.+..+.+
T Consensus 805 ~~~~~~v~~L~~~~~~~~eLe~~LlL~yTGitR~T~---------------~iV~~Vv~~~~------------------ 851 (974)
T PRK13412 805 FAQSPLVRWLPDSLFTQPEYRDCHLLYYTGITRTAK---------------GILAEIVRSMF------------------ 851 (974)
T ss_pred cccCcceeecCcchhhhhhccCcEEEEECCCeeeHH---------------HHHHHHHHHHH------------------
Confidence 11 12233221 3479999999998875 24444321110
Q ss_pred hhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHH
Q 002206 784 GVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKA 863 (953)
Q Consensus 784 ~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~ 863 (953)
.+ ++.+... .+-+. .-+.++++
T Consensus 852 --------------~~--~~~~~~~----------------------------------------l~~ig--~La~ea~~ 873 (974)
T PRK13412 852 --------------LN--STAHLQL----------------------------------------LHEMK--AHALDMYE 873 (974)
T ss_pred --------------hC--cHHHHHH----------------------------------------HHHHH--HHHHHHHH
Confidence 00 0000000 00011 12668899
Q ss_pred HHHccCChHHHHHHHHHHHHhhhhhhhc--CCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 864 LLTAAASDDQLTSLGELLYQCHYSYSAC--GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 864 ~l~~~~~~~~~~~lG~lm~~sh~sl~~~--~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
+|+++ |++.||+||+++|..++.+ |||+|++|+|++.|++ |++||||||||+|||+++|.++
T Consensus 874 ALe~g----D~~~LG~LMn~~w~ll~~L~~GVSnp~LD~Li~~A~~------------gAlGaKLTGAGGGGcvI~Lak~ 937 (974)
T PRK13412 874 AIQRG----EFEEFGRLVGKTWEQNKALDSGTNPAAVEAIIELIKD------------YTLGYKLPGAGGGGYLYMVAKD 937 (974)
T ss_pred HHHcC----CHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHc------------CCcEEEecccCcccEEEEEECC
Confidence 99986 9999999999999999998 9999999999999974 6899999999999999888753
Q ss_pred --Chhhhhhh
Q 002206 942 --SLRSSEQV 949 (953)
Q Consensus 942 --~~~~~~~~ 949 (953)
..+.+++.
T Consensus 938 ~~~a~~I~~~ 947 (974)
T PRK13412 938 PGAAERIRKI 947 (974)
T ss_pred hhhHHHHHHH
Confidence 34444433
No 17
>PTZ00298 mevalonate kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=331.13 Aligned_cols=284 Identities=19% Similarity=0.222 Sum_probs=209.0
Q ss_pred eEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCC
Q 002206 497 IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGP 576 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~ 576 (953)
.....|||||+|||||+|+||.++|..+|+++..+.++..+.. +.+.+..
T Consensus 10 ~~~~~~~~kvil~GEHaVvyg~~aI~~~I~~~d~~~i~~~~~~--------------------~~~~~~~---------- 59 (328)
T PTZ00298 10 TGKHIGYGKVILFGEHFVVYGAEAIVAGIDEYTECRLELTKGV--------------------PGLQVVD---------- 59 (328)
T ss_pred ccCCCcCeeEEEEecceeecCCchhhhecccceEEEEEEccCC--------------------CCceecc----------
Confidence 3467899999999999999999999999999876666644311 0111110
Q ss_pred ceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCC-CCCEEEEEEeCCCCCCCCchHHHHHHH
Q 002206 577 TFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF-EDSISMLVSSAVPEGKGVSSSASVEVA 655 (953)
Q Consensus 577 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~-~~g~~i~i~s~iP~g~GLgSSAA~~va 655 (953)
+...++ - + ...-.|.+..++..+.+..+... ..|++|.|.++||+++|||||||++||
T Consensus 60 ----~~~~~~-----~-~-----------~~~~~n~~~~a~~~~~~~~~~~~~~~g~~I~I~~~IP~gaGLGSSsA~avA 118 (328)
T PTZ00298 60 ----QRPAVP-----G-Y-----------IVEKREEQRKAHQLVLRHLNIDTSVDGLKMHLGGPLVPSSGIGASASDVVS 118 (328)
T ss_pred ----cccccc-----c-h-----------HHHhHHHHHHHHHHHHHHHhcccCCCCeEEEEECCCCCCCCchHHHHHHHH
Confidence 000000 0 0 00114555566666666666432 149999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCc-cceeeeecCCCeEEEEEeCCC
Q 002206 656 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPA-ELLGVVEIPSHIRFWGIDSGI 734 (953)
Q Consensus 656 ~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~-~~~~~~~~p~~~~~vl~dsgv 734 (953)
++.|++.+++.++++++++++|+.+|+.+||.|+|. |+.++++|| ++++..... ...+++++|+++.+++++||+
T Consensus 119 ~l~al~~l~~~~ls~~el~~~a~~~E~~~~g~~sG~-D~~~~~~Gg---~~~~~~~~g~~~~~~l~~~~~~~lvv~~~~~ 194 (328)
T PTZ00298 119 LSRALSELYQLNLTEEEVNLSAFVGEGGYHGTPSGA-DNTAATYGG---LISYRRVNGKSVFKRIAFQQPLYLVVCSTGI 194 (328)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCChH-HHHHHHcCC---eEEEecCCCccceeEecCCCCCeEEEEECCC
Confidence 999999999999999999999999999999999995 999999999 455443222 122456677788999999999
Q ss_pred ccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCC
Q 002206 735 RHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIP 814 (953)
Q Consensus 735 ~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp 814 (953)
+++|.. ++..+. .+++..|+.++.
T Consensus 195 ~~sT~~---------------~~~~v~----------------------------------~~~~~~p~~~~~------- 218 (328)
T PTZ00298 195 TASTTK---------------VVGDVR----------------------------------KLKENQPTWFNR------- 218 (328)
T ss_pred chhHHH---------------HHHHHH----------------------------------HHHhcCHHHHHH-------
Confidence 988742 121110 011112221111
Q ss_pred ccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCCC
Q 002206 815 ESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLG 894 (953)
Q Consensus 815 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs 894 (953)
+.+++.| ++.++..+|+++ |++.||++|+++|.++++++++
T Consensus 219 -----------------------------~~~~~~~------~~~~~~~al~~~----d~~~lg~~m~~~~~~l~~~~v~ 259 (328)
T PTZ00298 219 -----------------------------LLENYNA------CVSEAKEALQKG----NLFRVGELMNANHDLCQKLTVS 259 (328)
T ss_pred -----------------------------HHHHHHH------HHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHhCCC
Confidence 1112333 356788888885 8999999999999999999999
Q ss_pred CchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 895 SDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 895 ~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
+|++|++++.+++ .|++||||||+|+|||+++|.++
T Consensus 260 ~p~l~~l~~~~~~-----------~Ga~gaklSGsG~GG~v~al~~~ 295 (328)
T PTZ00298 260 CRELDSIVQTCRT-----------YGALGAKMSGTGRGGLVVALAAS 295 (328)
T ss_pred cHHHHHHHHHHHh-----------CCCceeEeccCCCCeEEEEEecc
Confidence 9999999999987 68999999999999999998654
No 18
>PRK03926 mevalonate kinase; Provisional
Probab=100.00 E-value=1.6e-34 Score=320.31 Aligned_cols=268 Identities=24% Similarity=0.297 Sum_probs=202.5
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCc
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (953)
+.++|||||+|+|||+||+|+++|.+||++++++.++++++. +.+.+.
T Consensus 2 ~~~~aPgkv~L~Geh~~~~g~~~l~~aI~~~~~v~i~~~~~~----------------------~~i~~~---------- 49 (302)
T PRK03926 2 VLCSAPGKIYLFGEHAVVYGKPAIACAIDLRTYVRAEFNDDS----------------------IYIESD---------- 49 (302)
T ss_pred eEEeeeeEEEEEecceeecCCeEEEEEecceEEEEEEECCCc----------------------eEEecc----------
Confidence 578999999999999999999999999999999999876431 111100
Q ss_pred eeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 002206 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (953)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~ 657 (953)
+ . ....|..|+..++..+.+..+ . +|++|++.++||+++|||||||+++|++
T Consensus 50 ~--~-----------------------~~~~~~~~~~~~~~~~~~~~~--~-~g~~i~i~~~iP~~~GLGSSsA~~~a~~ 101 (302)
T PRK03926 50 Y--G-----------------------KTGEKHPYVSAAIEKMREEAD--K-DGVTVSITSQIPVGSGLGSSAAVTVATI 101 (302)
T ss_pred c--c-----------------------cccchhHHHHHHHHHHHHhcC--C-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 0 0 011467788888776655444 3 5899999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccc
Q 002206 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHS 737 (953)
Q Consensus 658 ~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~ 737 (953)
.|++.+++.++++++++++|+.+|+.++|.+|| +|++++++||. +++... .+++. +++.+++++||.+++
T Consensus 102 ~al~~~~~~~l~~~~l~~la~~~E~~~~G~~sg-~D~~~~~~Gg~---~~~~~~-----~~l~~-~~~~~vl~~~~~~~s 171 (302)
T PRK03926 102 GALNRLLGLGLSLEEIAKLGHKVELLVQGAASP-TDTYVSTMGGF---VTIPDR-----KKLPF-PECGIVVGYTGSSGS 171 (302)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCch-HHHHHHhcCCe---EEEcCC-----CcCCC-CCceEEEEECCCCCc
Confidence 999999999999999999999999999999999 59999999993 443321 13343 378899999999888
Q ss_pred cCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccc
Q 002206 738 VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESI 817 (953)
Q Consensus 738 ~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i 817 (953)
|.. ++..+ +.+++..|+.+...
T Consensus 172 T~~---------------~~~~~----------------------------------~~~~~~~~~~~~~~--------- 193 (302)
T PRK03926 172 TKE---------------LVANV----------------------------------RKLKEEYPELIEPI--------- 193 (302)
T ss_pred HHH---------------HHHHH----------------------------------HHHHHhCHHHHHHH---------
Confidence 741 11111 00111111111100
Q ss_pred hhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCCCCch
Q 002206 818 VGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDG 897 (953)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs~~~ 897 (953)
.+.+. ..+.++.++++++ |++.||++|+++|..++.+++++|+
T Consensus 194 -------------------------------~~~~~--~~~~~~~~al~~~----d~~~l~~~~~~~~~~~~~~~~~~p~ 236 (302)
T PRK03926 194 -------------------------------LSSIG--KISEKGEELILSG----DYVSLGELMNINQGLLDALGVSTKE 236 (302)
T ss_pred -------------------------------HHHHH--HHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 00011 1134556777775 8999999999999877778999999
Q ss_pred HHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 898 TDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 898 ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
+|++++.+++ .|++|+||||+|+|||++++.++
T Consensus 237 l~~l~~~~~~-----------~ga~ga~lSGaG~Gg~v~~l~~~ 269 (302)
T PRK03926 237 LSELIYAART-----------AGALGAKITGAGGGGCMVALAAP 269 (302)
T ss_pred HHHHHHHHHh-----------CCCceeeeccCCCCCEEEEEecc
Confidence 9999999987 68999999999999999988654
No 19
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=4e-33 Score=326.91 Aligned_cols=371 Identities=12% Similarity=0.065 Sum_probs=240.4
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcc----cc-cccc-----
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAV----QA-DALT----- 85 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~----~~-~~~~----- 85 (953)
.+|+.+++.+|.||+..+.+++++|++|||+||++++.+....... +.+.+......+..... .. +.+.
T Consensus 21 ~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (507)
T PHA03392 21 ARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASH-LCGNITEIDASLSVEYFKKLVKSSAVFRKRGVV 99 (507)
T ss_pred ccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccC-CCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhh
Confidence 4577677889999999999999999999999999988643221110 11111111100000000 00 0000
Q ss_pred cChHHHHH-HHHHHhhccHHHHHHHH-HHHHH--cCCCcEEEECC-CchHHHHHHHh-CCcEEEEecCChhHHHHHHHh-
Q 002206 86 VDRLASLE-KYSETAVAPRKSILKDE-VEWLN--SIKADLVVSDV-VPVACRAAADA-GIRSVCVTNFSWDFIYAEYVM- 158 (953)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~L~--~~kpDlVV~D~-~~~~~~~A~~~-giP~I~is~~~~~~~~~~~~~- 158 (953)
.+...... .+..+...+...+..+. .+.|+ +.+||+||+|. ..|++.+|+.+ ++|.|.++++...+......+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg 179 (507)
T PHA03392 100 ADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMGA 179 (507)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhcc
Confidence 00000000 11111111222333333 46676 67899999996 78888899999 999998876543222222222
Q ss_pred hh-------------ccc---hHHHHH-------------------HHH-hhccc-----------cceEEe-c--CCCC
Q 002206 159 AA-------------GHH---HRSIVW-------------------QIA-EDYSH-----------CEFLIR-L--PGYC 188 (953)
Q Consensus 159 ~~-------------~~~---~~~~~~-------------------~l~-~~~~~-----------~~~l~~-~--~~~~ 188 (953)
.+ .+. ++.+.+ .+. ..|.. .+.++. . .+..
T Consensus 180 ~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~ 259 (507)
T PHA03392 180 VSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDN 259 (507)
T ss_pred CCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccC
Confidence 11 000 111110 011 11111 011111 1 1245
Q ss_pred CCCCCCceeecCc-ccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCc----hHh----HHHhhCCCCcEEEE-eCC-
Q 002206 189 PMPAFRDVIDVPL-VVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPA----GWK----LKEEYLPSGWKCLV-CGA- 255 (953)
Q Consensus 189 ~~p~~~~v~~vg~-~~~--~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~----~~~----ll~~ll~~~~~~vv-~G~- 255 (953)
++|..|+++.+|+ +.+ ..+++++++.++++.. ++++|||||||... +.+ +++++...+..+++ .+.
T Consensus 260 ~rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~ 338 (507)
T PHA03392 260 NRPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGE 338 (507)
T ss_pred CCCCCCCeeeecccccCCCCCCCCCHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 7788889999999 443 2356778999998754 45799999999753 222 33344333344444 332
Q ss_pred CCC-CCCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEe
Q 002206 256 SDS-QLPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (953)
Q Consensus 256 ~~~-~lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~ 330 (953)
..+ .+|+||.+. +|+| ++|+| +++||||||+||++||+++|||+|++| .+.||+.||++++++|+|+.++
T Consensus 339 ~~~~~~p~Nv~i~---~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP--~~~DQ~~Na~rv~~~G~G~~l~ 413 (507)
T PHA03392 339 VEAINLPANVLTQ---KWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLP--MMGDQFYNTNKYVELGIGRALD 413 (507)
T ss_pred cCcccCCCceEEe---cCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECC--CCccHHHHHHHHHHcCcEEEec
Confidence 233 578999984 5777 89965 999999999999999999999999999 7899999999999999999999
Q ss_pred cCCCChhhHHHHHHHHHhCCCCcc-----------CCCCHHHHHHHHHHHHHccCCCcCCCCc-hhhhhHHHHHhccccc
Q 002206 331 RRDLLTGHWKPYLERAISLKPCYE-----------GGINGGEVAAHILQETAIGKNYASDKLS-GARRLRDAIIFGYELQ 398 (953)
Q Consensus 331 ~~dl~~~~l~~al~~ll~~~~~~~-----------~~~~g~~~~A~~i~~~l~~~~~~~~~~~-ga~~Lr~a~~~~~~~q 398 (953)
..+++++.+.++|+++++++ .|+ +++..+.+.|.+|.|+ +.||+ |+.|||
T Consensus 414 ~~~~t~~~l~~ai~~vl~~~-~y~~~a~~ls~~~~~~p~~~~~~av~~iE~-------v~r~~~g~~~lr---------- 475 (507)
T PHA03392 414 TVTVSAAQLVLAIVDVIENP-KYRKNLKELRHLIRHQPMTPLHKAIWYTEH-------VIRNKHGNTSLK---------- 475 (507)
T ss_pred cCCcCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-------HHhCCCCccccc----------
Confidence 99999999999999999876 443 5666666666777777 66888 999999
Q ss_pred cCCCcccCccccccccc
Q 002206 399 RVPGRDVSIPEWYQTAE 415 (953)
Q Consensus 399 ~~~~~~~~~p~~~~~~~ 415 (953)
+++.+++ |++|+.
T Consensus 476 -~~~~~l~---~~qy~~ 488 (507)
T PHA03392 476 -TKAANVS---YSDYFM 488 (507)
T ss_pred -ccccCCC---HHHHHH
Confidence 9999999 888876
No 20
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only]
Probab=99.98 E-value=6.4e-31 Score=269.29 Aligned_cols=286 Identities=22% Similarity=0.327 Sum_probs=206.8
Q ss_pred EEEEcCcceeccccccccC------CCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCcc
Q 002206 498 FVARAPGRLDVMGGIADYS------GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~------g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 571 (953)
++.+||-|+.+.|+.||+. ||.|++++||+++|+.+.+..+.+|++. .
T Consensus 2 ii~raPLRItfgGGGTDvepy~~k~GGaVlnatIdky~y~~i~~~~d~~I~~~----------------------~---- 55 (333)
T COG2605 2 IISRAPLRITFGGGGTDVEPYCSKHGGAVLNATIDKYIYVTIEKGFDDEIRVR----------------------Y---- 55 (333)
T ss_pred cccccceEEEecCCCcCchHHHHhcCCEEEEeeeeeEEEEEEccCCCceEEEe----------------------c----
Confidence 4678999999999999974 9999999999999999999887765431 0
Q ss_pred CCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHH-HHHHhCCCCCCCEEEEEEeCCCCCCCCchHH
Q 002206 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-LMTELGVRFEDSISMLVSSAVPEGKGVSSSA 650 (953)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~-~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSA 650 (953)
++. + .++++ +.+ .++ ..++.++.. ++...|. +.+++...+|+|+|+|||||+
T Consensus 56 -~~~---~-~v~~~------~~~-----------~h~--~~~~~~l~r~~l~~~g~---~~~el~~~~D~P~GSGLGSSS 108 (333)
T COG2605 56 -DRT---E-FVKSY------LEN-----------EHK--PLVVESLKRDFLEFNGG---TPIELHTQSDAPPGSGLGSSS 108 (333)
T ss_pred -chH---H-hhhhh------Hhh-----------cCc--hHHHHHHHHHHHhhcCC---CceEEEEecCCCCCCCCCchH
Confidence 000 0 00110 000 011 233444432 2222221 239999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCcc-c-eeeeecC------
Q 002206 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE-L-LGVVEIP------ 722 (953)
Q Consensus 651 A~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~-~-~~~~~~p------ 722 (953)
|++||++.|+..+-|..+++++||+.|.++|++..+.+.|.+||++++|||+|. ++|++.. + ..++.+.
T Consensus 109 a~vvaLl~a~~~~kg~~~~~~~LA~eAy~IER~~l~~~gG~QDqYaaA~GGFnf---MEf~~~~~V~v~pL~i~~e~~~E 185 (333)
T COG2605 109 AFVVALLNALHAWKGESLGPYELAREAYEIEREDLKIVGGKQDQYAAAFGGFNF---MEFRGNGEVVVNPLRINRERTAE 185 (333)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhccccccccHHHHHhCCceE---EEEcCCCcEEEeecccchhHHHH
Confidence 999999999999999999999999999999999999999999999999999754 5666543 2 2344443
Q ss_pred CCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCCh
Q 002206 723 SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 802 (953)
Q Consensus 723 ~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 802 (953)
...++++++||+.|..+. +++....+... -.++.+
T Consensus 186 le~~~lL~yTGi~R~Ss~---------------V~~dQ~~~~~~-------------~~~~~~----------------- 220 (333)
T COG2605 186 LEARLLLYYTGITRQSSE---------------VIEDQVRNVVD-------------GDEETL----------------- 220 (333)
T ss_pred HHhceEEEEeccccchhH---------------HHHHHHHHhhc-------------ccHHHH-----------------
Confidence 257899999999987542 22211000000 000000
Q ss_pred hHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHH
Q 002206 803 HRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLY 882 (953)
Q Consensus 803 ~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~ 882 (953)
.+.|-+.+ -+.+++++|-.+ |+..||++|+
T Consensus 221 --------------------------------------------e~~~~mk~--~A~~~~~al~~n----d~~~f~~~l~ 250 (333)
T COG2605 221 --------------------------------------------EALHEMKA--LAYEMKDALVRN----DIPEFGQILD 250 (333)
T ss_pred --------------------------------------------HHHHHHHH--HHHHHHHHHHhc----chHHHHHHHH
Confidence 12222222 256788888875 8999999999
Q ss_pred Hhhhhhhhc--CCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEe-ccCChhh
Q 002206 883 QCHYSYSAC--GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVI-GRNSLRS 945 (953)
Q Consensus 883 ~sh~sl~~~--~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l-~~~~~~~ 945 (953)
++|+.-+.+ ++|+|.+|+|.++|++ .||+|+|+.|||.||.+.++ .|++...
T Consensus 251 ~gW~~KK~ls~~ISN~~IDriy~~A~~-----------~GA~~gKl~GaG~gGFllf~~~p~k~~~ 305 (333)
T COG2605 251 RGWEAKKKLSSRISNDAIDRIYELALK-----------NGAYGGKLSGAGGGGFLLFFCDPSKRNE 305 (333)
T ss_pred hHHHhhhhhccCcCcHHHHHHHHHHHh-----------cCchhceeeccCCccEEEEEeCccchHH
Confidence 999999986 7899999999999998 79999999999999987665 5555444
No 21
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.97 E-value=2.3e-30 Score=289.57 Aligned_cols=312 Identities=28% Similarity=0.455 Sum_probs=211.5
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (953)
|||+|+++++|+||++|+++|+++| +||+|+|++......+.. +.+.+.. ..+++..... ..++..++....
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~ 72 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLK----PRFPVRE-IPGLGPIQEN-GRLDRWKTVRNN 72 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhc----cccCEEE-ccCceEeccC-CccchHHHHHHH
Confidence 6899999999999999999999999 599999998875322111 1111111 1122222211 134444444444
Q ss_pred HHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHH-hh
Q 002206 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA-ED 174 (953)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 174 (953)
..+. ......+.+..+++++++||+||+|+.+.+..+|+..++|+|++++..|...+....... ..+..+..+.. ..
T Consensus 73 ~~~~-~~~~~~~~~~~~~l~~~~pDlVIsD~~~~~~~aa~~~giP~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 150 (318)
T PF13528_consen 73 IRWL-ARLARRIRREIRWLREFRPDLVISDFYPLAALAARRAGIPVIVISNQYWFLHPNFWLPWD-QDFGRLIERYIDRY 150 (318)
T ss_pred HHhh-HHHHHHHHHHHHHHHhcCCCEEEEcChHHHHHHHHhcCCCEEEEEehHHcccccCCcchh-hhHHHHHHHhhhhc
Confidence 3322 123445666788899999999999998888899999999999999877653211111100 01122222222 22
Q ss_pred -ccccceEEecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCchHhHHHhhCC-CCcEEEE
Q 002206 175 -YSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCLV 252 (953)
Q Consensus 175 -~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~~~ll~~ll~-~~~~~vv 252 (953)
+..++..+..++..+.+...++..+|+..++ +..+.. +.+.+.|+|++|+.+.+ .+.+.+.. +++.+++
T Consensus 151 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~--~~~~~~iLv~~gg~~~~-~~~~~l~~~~~~~~~v 221 (318)
T PF13528_consen 151 HFPPADRRLALSFYPPLPPFFRVPFVGPIIRP------EIRELP--PEDEPKILVYFGGGGPG-DLIEALKALPDYQFIV 221 (318)
T ss_pred cCCcccceecCCccccccccccccccCchhcc------cccccC--CCCCCEEEEEeCCCcHH-HHHHHHHhCCCCeEEE
Confidence 4445555555544333333344445554332 111111 12567899999988775 44443322 4577777
Q ss_pred eCCCCC-CCCCCeEECCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEe
Q 002206 253 CGASDS-QLPPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (953)
Q Consensus 253 ~G~~~~-~lp~NV~v~~~~-~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~ 330 (953)
+|.... ..++|+++.+|. ..++++|+.||++|||+|++|++|++++|+|+|++|.+.+.||..||+++++.|+|+.++
T Consensus 222 ~g~~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~ 301 (318)
T PF13528_consen 222 FGPNAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLS 301 (318)
T ss_pred EcCCcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcc
Confidence 777652 257899999887 678899999999999999999999999999999999887899999999999999999999
Q ss_pred cCCCChhhHHHHHHHH
Q 002206 331 RRDLLTGHWKPYLERA 346 (953)
Q Consensus 331 ~~dl~~~~l~~al~~l 346 (953)
.++++++.|.++|+++
T Consensus 302 ~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 302 QEDLTPERLAEFLERL 317 (318)
T ss_pred cccCCHHHHHHHHhcC
Confidence 9999999999888764
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.97 E-value=1.2e-32 Score=327.32 Aligned_cols=201 Identities=20% Similarity=0.261 Sum_probs=117.0
Q ss_pred CCCCCCCceeecCc-ccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCc--hHh----HHHhhCCCCcEEEE-eCCCC-C
Q 002206 188 CPMPAFRDVIDVPL-VVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPA--GWK----LKEEYLPSGWKCLV-CGASD-S 258 (953)
Q Consensus 188 ~~~p~~~~v~~vg~-~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~--~~~----ll~~ll~~~~~~vv-~G~~~-~ 258 (953)
.|+|..|+++++|+ +.+++++++++++++++.+.++++|||||||... +.+ +.+++...+..+++ ..... .
T Consensus 240 ~prp~~p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~ 319 (500)
T PF00201_consen 240 FPRPLLPNVVEVGGLHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPE 319 (500)
T ss_dssp --HHHHCTSTTGCGC-S----TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGC
T ss_pred CCcchhhcccccCccccccccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccccc
Confidence 35666688899999 5666778899999998864578999999999865 222 33334333334443 33322 2
Q ss_pred CCCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCC
Q 002206 259 QLPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL 334 (953)
Q Consensus 259 ~lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl 334 (953)
.+|+|+++ .+|+| ++|+| +++||||||+||++||+++|||||++| .|+||+.||+++++.|+|+.++..++
T Consensus 320 ~l~~n~~~---~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P--~~~DQ~~na~~~~~~G~g~~l~~~~~ 394 (500)
T PF00201_consen 320 NLPKNVLI---VKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIP--LFGDQPRNAARVEEKGVGVVLDKNDL 394 (500)
T ss_dssp HHHTTEEE---ESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-G--CSTTHHHHHHHHHHTTSEEEEGGGC-
T ss_pred cccceEEE---eccccchhhhhcccceeeeeccccchhhhhhhccCCccCCC--CcccCCccceEEEEEeeEEEEEecCC
Confidence 37899988 46888 99986 899999999999999999999999999 89999999999999999999999999
Q ss_pred ChhhHHHHHHHHHhCCCCcc-----------CCCCHHHHHHHHHHHHHccCCCcCCCCchhhhhHHHHHhccccccCCCc
Q 002206 335 LTGHWKPYLERAISLKPCYE-----------GGINGGEVAAHILQETAIGKNYASDKLSGARRLRDAIIFGYELQRVPGR 403 (953)
Q Consensus 335 ~~~~l~~al~~ll~~~~~~~-----------~~~~g~~~~A~~i~~~l~~~~~~~~~~~ga~~Lr~a~~~~~~~q~~~~~ 403 (953)
+.+++.++|+++++|+ .|+ +++..+.+.|.+|.|+ +.||.|++||| +++.
T Consensus 395 ~~~~l~~ai~~vl~~~-~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~-------v~~~~~~~~l~-----------~~~~ 455 (500)
T PF00201_consen 395 TEEELRAAIREVLENP-SYKENAKRLSSLFRDRPISPLERAVWWIEY-------VARHGGAPHLR-----------SPAR 455 (500)
T ss_dssp SHHHHHHHHHHHHHSH-HHHHHHHHHHHTTT-------------------------------------------------
T ss_pred cHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHH-------HHhcCCCcccC-----------Chhh
Confidence 9999999999999987 443 7899999999999999 88999999999 9999
Q ss_pred ccCccccccccc
Q 002206 404 DVSIPEWYQTAE 415 (953)
Q Consensus 404 ~~~~p~~~~~~~ 415 (953)
+++ ||||+.
T Consensus 456 ~l~---~~~~~~ 464 (500)
T PF00201_consen 456 DLS---FYQYYL 464 (500)
T ss_dssp ------------
T ss_pred cCC---HHHHHH
Confidence 999 999886
No 23
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.94 E-value=2.5e-25 Score=257.28 Aligned_cols=326 Identities=18% Similarity=0.108 Sum_probs=189.2
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCccccccccc-----ChHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTV-----DRLA 90 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~ 90 (953)
|+|+|+ +.++.||+.|+++|+++|+++||+|+|++.... ...+...++.+.+...+........... ....
T Consensus 1 mrIl~~-~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~---~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (401)
T cd03784 1 MRVLIT-TIGSRGDVQPLVALAWALRAAGHEVRVATPPEF---ADLVEAAGLEFVPVGGDPDELLASPERNAGLLLLGPG 76 (401)
T ss_pred CeEEEE-eCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhH---HHHHHHcCCceeeCCCCHHHHHhhhhhcccccccchH
Confidence 356655 456899999999999999999999999988531 1111112223332211111000000000 0001
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCChhHH----------HH-HHHh
Q 002206 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDFI----------YA-EYVM 158 (953)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~~~----------~~-~~~~ 158 (953)
........+.........+..+.++..+||+||+|. .+++..+|+++|||+|.++...+... .. .+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T cd03784 77 LLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPPPLGRANLRLYAL 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCCccchHHHHHHHH
Confidence 111111111112233444555566678999999996 67778889999999999865432210 00 0000
Q ss_pred -hhc---cchHHHHHHHHhhccc---------c-ceEEecCCC--CCCCCCC-ceeecCc-ccc-c-CCCChHHHHHHhC
Q 002206 159 -AAG---HHHRSIVWQIAEDYSH---------C-EFLIRLPGY--CPMPAFR-DVIDVPL-VVR-R-LHKSRKEVRKELG 218 (953)
Q Consensus 159 -~~~---~~~~~~~~~l~~~~~~---------~-~~l~~~~~~--~~~p~~~-~v~~vg~-~~~-~-~~~~~~e~~~~l~ 218 (953)
... .............+.- . ..++..+.. .+.+..+ +...+|+ ... . ....+.++..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (401)
T cd03784 157 LEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLA 236 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCCCCCccccCcEeCCCCCCCCCCCCCCHHHHHHHh
Confidence 000 0000011111111110 0 111111111 1112212 2222222 111 1 1122345556654
Q ss_pred CCCCCcEEEEEcCCCCch--HhHH----HhhCCCCcEEE-EeCCCCC---CCCCCeEECCCCCCHHHHHhhcCEEEecCC
Q 002206 219 IEDDVKLLILNFGGQPAG--WKLK----EEYLPSGWKCL-VCGASDS---QLPPNFIKLPKDAYTPDFMAASDCMLGKIG 288 (953)
Q Consensus 219 ~~~~~~vVlvs~Gs~~~~--~~ll----~~ll~~~~~~v-v~G~~~~---~lp~NV~v~~~~~~~pdlLa~aDlfIthgG 288 (953)
+++++|||++||.... ..+. +.+...++.++ .+|.... .+|+||++.+|++ +.++|++||+||||||
T Consensus 237 --~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v~~~~~~p-~~~ll~~~d~~I~hgG 313 (401)
T cd03784 237 --AGRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVP-HDWLLPRCAAVVHHGG 313 (401)
T ss_pred --CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccccCCCCceEEeCCCC-HHHHhhhhheeeecCC
Confidence 3678999999998652 2222 23333455444 4565432 3688999988764 4589999999999999
Q ss_pred hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 289 YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 289 ~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
+||++|++++|||+|++| .+.||+.||+++++.|+|+.+...+++++.+.++|+++++++
T Consensus 314 ~~t~~eal~~GvP~v~~P--~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~~ 373 (401)
T cd03784 314 AGTTAAALRAGVPQLVVP--FFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDPP 373 (401)
T ss_pred chhHHHHHHcCCCEEeeC--CCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCHH
Confidence 999999999999999999 567999999999999999999888888899999999998743
No 24
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.94 E-value=1.2e-24 Score=245.52 Aligned_cols=324 Identities=15% Similarity=0.137 Sum_probs=203.8
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHH
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASL 92 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 92 (953)
|+++.| ..|...||+.|+++++++|.++||+|.|++.... .....++..++.+.... ..++. .... +
T Consensus 1 ~~~i~~---~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~-~e~~l~~~~g~~~~~~~-~~~l~-----~~~~---~ 67 (352)
T PRK12446 1 MKKIVF---TGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQG-IEKTIIEKENIPYYSIS-SGKLR-----RYFD---L 67 (352)
T ss_pred CCeEEE---EcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCc-cccccCcccCCcEEEEe-ccCcC-----CCch---H
Confidence 665444 4555579999999999999999999999976432 22222221122222210 00110 0001 1
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC---CchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHH
Q 002206 93 EKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW 169 (953)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~ 169 (953)
..+...+ .......+..+.+++++||+||+.. ...++.+|..+++|++.+..........
T Consensus 68 ~~~~~~~--~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~~n--------------- 130 (352)
T PRK12446 68 KNIKDPF--LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGLAN--------------- 130 (352)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccHHH---------------
Confidence 1111111 1111233446778999999999875 3346788999999999985433211100
Q ss_pred HHHhhccccceEEecCCCCCCCCC--CceeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHHHhh
Q 002206 170 QIAEDYSHCEFLIRLPGYCPMPAF--RDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY 243 (953)
Q Consensus 170 ~l~~~~~~~~~l~~~~~~~~~p~~--~~v~~vg~~~~~--~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll~~l 243 (953)
++...+ ++.++. .+......+ .+++.+|+-+++ ....+++.++.+++++++++|+|+.||++.. .++....
T Consensus 131 r~~~~~--a~~v~~-~f~~~~~~~~~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~ 207 (352)
T PRK12446 131 KIALRF--ASKIFV-TFEEAAKHLPKEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREA 207 (352)
T ss_pred HHHHHh--hCEEEE-EccchhhhCCCCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHH
Confidence 111111 111211 111111111 234444543332 2233456667788877889999999999985 2332221
Q ss_pred ---CCCCcE-EEEeCCCCCC--C--CCCeEECCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC---C
Q 002206 244 ---LPSGWK-CLVCGASDSQ--L--PPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF---N 311 (953)
Q Consensus 244 ---l~~~~~-~vv~G~~~~~--l--p~NV~v~~~~-~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~---~ 311 (953)
+..++. +.++|....+ + -.++.+.+|. ++|+++|++||++|||+|.+|++|++++|+|+|++|++.. .
T Consensus 208 l~~l~~~~~vv~~~G~~~~~~~~~~~~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~ 287 (352)
T PRK12446 208 LPELLLKYQIVHLCGKGNLDDSLQNKEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRG 287 (352)
T ss_pred HHhhccCcEEEEEeCCchHHHHHhhcCCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCc
Confidence 223464 4467875311 1 1356677887 6799999999999999999999999999999999997532 5
Q ss_pred chHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc------CCCCHHHHHHHHHHH
Q 002206 312 EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE------GGINGGEVAAHILQE 369 (953)
Q Consensus 312 DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~------~~~~g~~~~A~~i~~ 369 (953)
+|..||+++++.|++..+...+++++.+.++|.++++|++.++ ..++++.++++.+.+
T Consensus 288 ~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 288 DQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKTALKKYNGKEAIQTIIDHISE 351 (352)
T ss_pred hHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 8999999999999999999899999999999999997764433 466777777776653
No 25
>PLN02208 glycosyltransferase family protein
Probab=99.93 E-value=2.2e-23 Score=240.29 Aligned_cols=339 Identities=12% Similarity=0.104 Sum_probs=201.8
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccC--CCceeeeeeccc--CCcccccccccChHHHHHHHHH
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ--SPRLFIRKVLLD--CGAVQADALTVDRLASLEKYSE 97 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~--~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~ 97 (953)
++.++.||++|++.||+.|+.+||+|||+++........... .+.+.+...... .|+. .+... .......+..
T Consensus 10 ~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp--~g~~~-~~~l~~~l~~ 86 (442)
T PLN02208 10 FPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLP--AGAET-TSDIPISMDN 86 (442)
T ss_pred ecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCC--CCccc-ccchhHHHHH
Confidence 689999999999999999999999999998642110000000 011222221111 1211 00000 0000001111
Q ss_pred HhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCCh-hHHHHHH----H----hhhcc------
Q 002206 98 TAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSW-DFIYAEY----V----MAAGH------ 162 (953)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~-~~~~~~~----~----~~~~~------ 162 (953)
++......+.....+++++.+||+||+|+..++..+|+.+|||.+.+...+. ...+..+ . +..+.
T Consensus 87 ~~~~~~~~~~~~l~~~L~~~~~~cVV~D~~~wa~~vA~e~giP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp~~~~~~~ 166 (442)
T PLN02208 87 LLSEALDLTRDQVEAAVRALRPDLIFFDFAQWIPEMAKEHMIKSVSYIIVSATTIAHTHVPGGKLGVPPPGYPSSKVLFR 166 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEECCcHhHHHHHHHhCCCEEEEEhhhHHHHHHHccCccccCCCCCCCCCcccccC
Confidence 1111122233334556666789999999877888999999999988744321 1111100 0 00000
Q ss_pred --c----------hHHHHHHHHhhccccceEEecCCC---------CCCCCCCceeecCcccc-cC--CCChHHHHHHhC
Q 002206 163 --H----------HRSIVWQIAEDYSHCEFLIRLPGY---------CPMPAFRDVIDVPLVVR-RL--HKSRKEVRKELG 218 (953)
Q Consensus 163 --~----------~~~~~~~l~~~~~~~~~l~~~~~~---------~~~p~~~~v~~vg~~~~-~~--~~~~~e~~~~l~ 218 (953)
. +..+.+++...+..++.++.-++. ..+|..+++..|||... .. ..+++++.+||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd 246 (442)
T PLN02208 167 ENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLS 246 (442)
T ss_pred HHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHh
Confidence 0 001111111122334433322211 12233368999999533 22 345678999999
Q ss_pred CCCCCcEEEEEcCCCCc-h-HhHHH---hh--CCCCcEEEEe-CCC--C--CCCC---------CCeEECCCCCCHH--H
Q 002206 219 IEDDVKLLILNFGGQPA-G-WKLKE---EY--LPSGWKCLVC-GAS--D--SQLP---------PNFIKLPKDAYTP--D 275 (953)
Q Consensus 219 ~~~~~~vVlvs~Gs~~~-~-~~ll~---~l--l~~~~~~vv~-G~~--~--~~lp---------~NV~v~~~~~~~p--d 275 (953)
..+++++|||||||... + .++.+ ++ ....+.+++- +.. . ..+| .|+.+ ..|+| +
T Consensus 247 ~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v---~~W~PQ~~ 323 (442)
T PLN02208 247 GFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVW---GGWVQQPL 323 (442)
T ss_pred cCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEe---eccCCHHH
Confidence 77678999999999876 2 22333 22 2233444443 111 1 1255 46665 35888 8
Q ss_pred HHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEecCC---CChhhHHHHHHHHHhC
Q 002206 276 FMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRD---LLTGHWKPYLERAISL 349 (953)
Q Consensus 276 lLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~-~G~g~~l~~~d---l~~~~l~~al~~ll~~ 349 (953)
+|+| +.+||||||+||++|++++|||||++| .+.||+.||+++++ .|+|+.+...+ ++.+.+..+|++++.+
T Consensus 324 iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P--~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~ 401 (442)
T PLN02208 324 ILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIP--FLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDK 401 (442)
T ss_pred HhcCCccCeEEccCCchHHHHHHHcCCCEEecC--cchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcC
Confidence 9987 678999999999999999999999999 79999999998876 89999997655 8889999999999965
Q ss_pred CCCccCCCCHHHHHHHHHHHHH
Q 002206 350 KPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 350 ~~~~~~~~~g~~~~A~~i~~~l 371 (953)
+. ......++.|..|.+.+
T Consensus 402 ~~---e~g~~~r~~~~~~~~~~ 420 (442)
T PLN02208 402 DS---DLGKLVRSNHTKLKEIL 420 (442)
T ss_pred Cc---hhHHHHHHHHHHHHHHH
Confidence 51 02234555666666554
No 26
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.93 E-value=8.7e-24 Score=236.64 Aligned_cols=309 Identities=17% Similarity=0.137 Sum_probs=183.2
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (953)
+|+|+++|+|+||++|+++|+++|++ ||+|+|++......+......+.+...+ .......++ .++...++....
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~-~~~~~~~l~~~~ 75 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKYGFKVFETFP---GIKLKGEDG-KVNIVKTLRNKE 75 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhhcCcceeccC---CceEeecCC-cCcHHHHHHhhc
Confidence 47789999999999999999999999 9999998765311110000001111111 001111111 123333322111
Q ss_pred HHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHH-hhc
Q 002206 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA-EDY 175 (953)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~ 175 (953)
.+ ....+.++.+++++++||+||+|..+.+..+|+.++||+|.+.+.. .. .+ +.......+....+. ..+
T Consensus 76 ~~----~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i~~q~-~~---~~-~~~~~~~~~~~~~~~~~~~ 146 (321)
T TIGR00661 76 YS----PKKAIRREINIIREYNPDLIISDFEYSTVVAAKLLKIPVICISNQN-YT---RY-PLKTDLIVYPTMAALRIFN 146 (321)
T ss_pred cc----cHHHHHHHHHHHHhcCCCEEEECCchHHHHHHHhcCCCEEEEecch-hh---cC-CcccchhHHHHHHHHHHhc
Confidence 11 1134556678899999999999998888999999999999887621 11 11 100001111111221 222
Q ss_pred cccceEEecCCCCCCCCCCceeecCcccccC-CCChHHHHHHhCCCCCCcEEEEEcCCCCchHhHHHhhCC-CCcEEEEe
Q 002206 176 SHCEFLIRLPGYCPMPAFRDVIDVPLVVRRL-HKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCLVC 253 (953)
Q Consensus 176 ~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~-~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~~~ll~~ll~-~~~~~vv~ 253 (953)
..++.+...++..+.+..|... ...+ +..+.+..+.. +.+.+.|++++|+.+.. .+++.+.. +++.+++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~p~~~-----~~~~~~~~~~~~~~~~--~~~~~~iLv~~g~~~~~-~l~~~l~~~~~~~~i~~ 218 (321)
T TIGR00661 147 ERCERFIVPDYPFPYTICPKII-----KNMEGPLIRYDVDDVD--NYGEDYILVYIGFEYRY-KILELLGKIANVKFVCY 218 (321)
T ss_pred cccceEeeecCCCCCCCCcccc-----ccCCCcccchhhhccc--cCCCCcEEEECCcCCHH-HHHHHHHhCCCeEEEEe
Confidence 3334443222211111122110 0001 11111222211 22456788888886652 34444422 23444433
Q ss_pred CCCC--CCCCCCeEECCCCC-CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEe
Q 002206 254 GASD--SQLPPNFIKLPKDA-YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (953)
Q Consensus 254 G~~~--~~lp~NV~v~~~~~-~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~ 330 (953)
+... ..+++|+.+.+|.. .++++|++||+||||+|++|++|++++|+|+|++|.+.+.||..||+.+++.|+|+.++
T Consensus 219 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~ 298 (321)
T TIGR00661 219 SYEVAKNSYNENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALE 298 (321)
T ss_pred CCCCCccccCCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcC
Confidence 3221 22678999888774 67899999999999999999999999999999999877779999999999999999998
Q ss_pred cCCCChhhHHHHHHHHHhCC
Q 002206 331 RRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 331 ~~dl~~~~l~~al~~ll~~~ 350 (953)
..++ .+.+++.++++++
T Consensus 299 ~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 299 YKEL---RLLEAILDIRNMK 315 (321)
T ss_pred hhhH---HHHHHHHhccccc
Confidence 7776 3444555555554
No 27
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.92 E-value=3.7e-23 Score=238.35 Aligned_cols=335 Identities=15% Similarity=0.115 Sum_probs=196.4
Q ss_pred cCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcc--cccccccChHHHHHHHHHHhh
Q 002206 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAV--QADALTVDRLASLEKYSETAV 100 (953)
Q Consensus 23 ~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 100 (953)
..++.||+.|+++||++|+++||+|+|+++.. +.+.++..++.+.+........ .......+... .+..+.
T Consensus 2 ~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~---~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 74 (392)
T TIGR01426 2 NIPAHGHVNPTLGVVEELVARGHRVTYATTEE---FAERVEAAGAEFVLYGSALPPPDNPPENTEEEPID---IIEKLL- 74 (392)
T ss_pred CCCccccccccHHHHHHHHhCCCeEEEEeCHH---HHHHHHHcCCEEEecCCcCccccccccccCcchHH---HHHHHH-
Confidence 35678999999999999999999999998843 1222221222332221111100 00000001111 111111
Q ss_pred ccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCChhH-HH--------HHHHhh-h--ccchHHH
Q 002206 101 APRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDF-IY--------AEYVMA-A--GHHHRSI 167 (953)
Q Consensus 101 ~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~~-~~--------~~~~~~-~--~~~~~~~ 167 (953)
...........+.+++.+||+||.|. .+++..+|+.+|||+|.++...+.. .+ ...+.. . ......+
T Consensus 75 ~~~~~~~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T TIGR01426 75 DEAEDVLPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAEY 154 (392)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccccccccccccchhhhhhhccccchhHHH
Confidence 11112233334556678999999997 5688889999999999885322100 00 000000 0 0000111
Q ss_pred HH---HHHhhcc----c--------cc-eEEecCCCC--CCCCC-CceeecCcccccCCCChHHHHHHhCCCCCCcEEEE
Q 002206 168 VW---QIAEDYS----H--------CE-FLIRLPGYC--PMPAF-RDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLIL 228 (953)
Q Consensus 168 ~~---~l~~~~~----~--------~~-~l~~~~~~~--~~p~~-~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlv 228 (953)
.. .++..+. . .+ .+...+... +.+.+ +++..+|+....+...+ .++...+++++|||
T Consensus 155 ~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~~~~----~~~~~~~~~~~v~v 230 (392)
T TIGR01426 155 VARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRKEDG----SWERPGDGRPVVLI 230 (392)
T ss_pred HHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeEEECCCCCCccccC----CCCCCCCCCCEEEE
Confidence 11 1111111 0 00 111111111 11222 35677777433211111 13333356789999
Q ss_pred EcCCCCch-H----hHHHhhCCCCcEE-EEeCCCCC-----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHH
Q 002206 229 NFGGQPAG-W----KLKEEYLPSGWKC-LVCGASDS-----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALA 297 (953)
Q Consensus 229 s~Gs~~~~-~----~ll~~ll~~~~~~-vv~G~~~~-----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~ 297 (953)
++||.... . .++..+...++.+ +.+|.... .+++|+.+.+|++. .++|++||+||+|||++|++|+++
T Consensus 231 s~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~-~~ll~~~~~~I~hgG~~t~~Eal~ 309 (392)
T TIGR01426 231 SLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQWVPQ-LEILKKADAFITHGGMNSTMEALF 309 (392)
T ss_pred ecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCCCCH-HHHHhhCCEEEECCCchHHHHHHH
Confidence 99996432 1 2333444455543 45565421 26889998776553 389999999999999999999999
Q ss_pred cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHH
Q 002206 298 YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQ 368 (953)
Q Consensus 298 ~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~ 368 (953)
+|+|+|++| ...||+.|++++++.|+|+.+...+++++++.++|+++++++.... ...+|+..+|++|+
T Consensus 310 ~G~P~v~~p--~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~ 387 (392)
T TIGR01426 310 NGVPMVAVP--QGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIE 387 (392)
T ss_pred hCCCEEecC--CcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 999999999 5679999999999999999999888889999999999998763111 34567777777777
Q ss_pred HHH
Q 002206 369 ETA 371 (953)
Q Consensus 369 ~~l 371 (953)
+++
T Consensus 388 ~~~ 390 (392)
T TIGR01426 388 GFL 390 (392)
T ss_pred Hhh
Confidence 653
No 28
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.91 E-value=1e-23 Score=241.15 Aligned_cols=340 Identities=18% Similarity=0.196 Sum_probs=199.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecc-cCCcccccccccChHHHHH-
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLL-DCGAVQADALTVDRLASLE- 93 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~- 93 (953)
|+|+|+..+. .||+.|+++|+++|.++||+|+|+|... +.+.+..-+..+..... +......+ ...+...++.
T Consensus 2 mkil~~~~~~-~Ghv~p~~aL~~eL~~~gheV~~~~~~~---~~~~ve~ag~~f~~~~~~~~~~~~~~-~~~~~~~~~~~ 76 (406)
T COG1819 2 MKILFVVCGA-YGHVNPCLALGKELRRRGHEVVFASTGK---FKEFVEAAGLAFVAYPIRDSELATED-GKFAGVKSFRR 76 (406)
T ss_pred ceEEEEeccc-cccccchHHHHHHHHhcCCeEEEEeCHH---HHHHHHHhCcceeeccccCChhhhhh-hhhhccchhHH
Confidence 6777777777 9999999999999999999999998853 22222111111111000 10000000 0011111111
Q ss_pred HHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCChh----------HHH---------H
Q 002206 94 KYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWD----------FIY---------A 154 (953)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~~----------~~~---------~ 154 (953)
.+.. ......+..+.+.+..||+|+.|...+..+++...++|++....-.|. ... .
T Consensus 77 ~~~~-----~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (406)
T COG1819 77 LLQQ-----FKKLIRELLELLRELEPDLVVDDARLSLGLAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKLPIPLY 151 (406)
T ss_pred Hhhh-----hhhhhHHHHHHHHhcchhhhhcchhhhhhhhhhhcccchhhhhhhhccCCcccccCccccccccccccccc
Confidence 1211 122344556778889999999998655557777788887765221110 000 0
Q ss_pred HHHhhhccch---HHHHHHHHhhccc-cc-------eEEecCC--------CCCCC--CCC-ceeecCcccccCCCChHH
Q 002206 155 EYVMAAGHHH---RSIVWQIAEDYSH-CE-------FLIRLPG--------YCPMP--AFR-DVIDVPLVVRRLHKSRKE 212 (953)
Q Consensus 155 ~~~~~~~~~~---~~~~~~l~~~~~~-~~-------~l~~~~~--------~~~~p--~~~-~v~~vg~~~~~~~~~~~e 212 (953)
.......... ..........+.. .+ .++..+. ..+.| ..| ....+|+....+. .+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~ 228 (406)
T COG1819 152 PLPPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEAA---NE 228 (406)
T ss_pred ccChhhccccccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCcccccccccc---cc
Confidence 0000000000 0000000000000 00 0000000 00011 001 1112232111111 11
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCchHhH----HHhhCCCCcEEEEe-CCCC---CCCCCCeEECCCCCCHHHHHhhcCEEE
Q 002206 213 VRKELGIEDDVKLLILNFGGQPAGWKL----KEEYLPSGWKCLVC-GASD---SQLPPNFIKLPKDAYTPDFMAASDCML 284 (953)
Q Consensus 213 ~~~~l~~~~~~~vVlvs~Gs~~~~~~l----l~~ll~~~~~~vv~-G~~~---~~lp~NV~v~~~~~~~pdlLa~aDlfI 284 (953)
...+ ...++++||+|+||.....++ ++++...++.+++. |... .++|.|+.+.++++ ...++++||+||
T Consensus 229 ~~~~--~~~d~~~vyvslGt~~~~~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p-~~~~l~~ad~vI 305 (406)
T COG1819 229 LPYW--IPADRPIVYVSLGTVGNAVELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVP-QLELLPRADAVI 305 (406)
T ss_pred Ccch--hcCCCCeEEEEcCCcccHHHHHHHHHHHHhcCCcEEEEeccccccccccCCCceEEecCCC-HHHHhhhcCEEE
Confidence 1111 345789999999998853222 23455567776665 4422 23799999976544 238999999999
Q ss_pred ecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------C
Q 002206 285 GKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------G 355 (953)
Q Consensus 285 thgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~ 355 (953)
||||+|||+||+++|||+|++| ...||+.||.++++.|+|+.+..+.++++.++++|+++|+++...+ .
T Consensus 306 ~hGG~gtt~eaL~~gvP~vv~P--~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~ 383 (406)
T COG1819 306 HHGGAGTTSEALYAGVPLVVIP--DGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEFK 383 (406)
T ss_pred ecCCcchHHHHHHcCCCEEEec--CCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999 5689999999999999999999999999999999999998773221 5
Q ss_pred CCCHHHHHHHHHHHHHcc
Q 002206 356 GINGGEVAAHILQETAIG 373 (953)
Q Consensus 356 ~~~g~~~~A~~i~~~l~~ 373 (953)
..+|+.++|+.|++....
T Consensus 384 ~~~g~~~~a~~le~~~~~ 401 (406)
T COG1819 384 EEDGPAKAADLLEEFARE 401 (406)
T ss_pred hcccHHHHHHHHHHHHhc
Confidence 778888899999987654
No 29
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.91 E-value=2e-23 Score=229.41 Aligned_cols=250 Identities=12% Similarity=0.167 Sum_probs=182.8
Q ss_pred EEEEcCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l----~GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.++||||||| +|+|.| |+...+|.+||+++.++.+++.++.+ +.+.+.
T Consensus 3 ~~~~apakinl~l~i~g~~~dg~h~l~si~~ai~l~~~v~v~~~~~~~---------------------~~i~~~----- 56 (286)
T PRK00128 3 ILEKAPAKINLSLDVLGKREDGYHEVEMIMQTIDLADRLEIEKLKEDG---------------------IVVESN----- 56 (286)
T ss_pred EEEeccceEEEEeecCccCCCCcceeheeeEecCCCcEEEEEECCCCC---------------------EEEEeC-----
Confidence 56899999999 899999 99999999999999999998875432 222210
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
+ .. . ...|.|++..++..+.+.++.. .|++|.|.++||+++|||||||.
T Consensus 57 --------~-~~-------------------~-~~~~~n~~~~~~~~~~~~~~~~--~~~~i~i~~~iP~~~GLGSSsa~ 105 (286)
T PRK00128 57 --------N-RY-------------------V-PNDERNLAYKAAKLLKERYNIK--QGVSITIDKNIPVAAGLAGGSSD 105 (286)
T ss_pred --------C-CC-------------------C-CCCCCcHHHHHHHHHHHhcCCC--CCeEEEEEcCCCccccchHHHHH
Confidence 0 00 0 1234567777777766666643 68999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeC
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 732 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~ds 732 (953)
++|++.|++.+++.++++++++++|.++| .|..++++||. ++...+.... .+++.+++..++++++
T Consensus 106 a~a~~~al~~~~~~~l~~~~l~~~a~~~g----------~dv~~~~~Gg~---~~~~~~g~~~-~~~~~~~~~~~vv~~p 171 (286)
T PRK00128 106 AAATLRGLNKLWNLGLSLEELAEIGLEIG----------SDVPFCIYGGT---ALATGRGEKI-TPLKSPPSCWVVLAKP 171 (286)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHhC----------CCCCeEeeCCe---EEEecCCccc-ccCCCCCCcEEEEEcC
Confidence 99999999999999999999999999875 27788999984 4444332222 4455556788999988
Q ss_pred CCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhc
Q 002206 733 GIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKN 812 (953)
Q Consensus 733 gv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 812 (953)
+...+|.. +.+.
T Consensus 172 ~~~~~T~~---------------~~~~----------------------------------------------------- 183 (286)
T PRK00128 172 DIGVSTKD---------------VYKN----------------------------------------------------- 183 (286)
T ss_pred CCCCCHHH---------------HHhc-----------------------------------------------------
Confidence 76655531 0000
Q ss_pred CCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcC
Q 002206 813 IPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACG 892 (953)
Q Consensus 813 lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~ 892 (953)
++. ++.. ...+..+..++..+ |++.+|++|+ ..+..++
T Consensus 184 ~~~------------------------------~~~~-----~~~~~~~~~~l~~~----d~~~~~~~~~---n~l~~~~ 221 (286)
T PRK00128 184 LDL------------------------------DKIS-----HPDTEKLIEAIEEG----DYQGICANMG---NVLENVT 221 (286)
T ss_pred Ccc------------------------------cccc-----CcchHHHHHHHhcC----CHHHHHHhcc---CcHHHHH
Confidence 000 0000 00134566777775 8999999885 3455565
Q ss_pred CC-CchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 893 LG-SDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 893 vs-~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
++ +|+++++++.+++ .|++|++|||+| +|+++|.++
T Consensus 222 ~~~~p~l~~l~~~~~~-----------~Ga~g~~lSGsG--~sv~~l~~~ 258 (286)
T PRK00128 222 LKKYPEIAKIKERMLK-----------FGADGALMSGSG--PTVFGLFDD 258 (286)
T ss_pred HhhChHHHHHHHHHHh-----------cCCCeeEEcccC--ccEEEEeCC
Confidence 54 8999999999987 689999999998 888888665
No 30
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents plant and fungal forms of the ERG8 type of phosphomevalonate kinase.
Probab=99.90 E-value=7.1e-22 Score=224.15 Aligned_cols=208 Identities=16% Similarity=0.162 Sum_probs=142.1
Q ss_pred EEcCcceeccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCce
Q 002206 500 ARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (953)
Q Consensus 500 ~~APGrv~l~GeH~d~~-g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (953)
++||||+-|.||+++.. |.+++-.|++.|+|+.+++..+.. ..+ ...|.|.|.. |.+. .+
T Consensus 2 ~sAPGKlliAGgYlVLep~y~aiVval~~r~~a~v~~~~~~~-~~~--------------~~~i~v~SpQ--f~~~--~~ 62 (454)
T TIGR01219 2 ASAPGKVLMAGGYLVLDKPYAGLVLGLNARFYAIVKPINEEV-GAW--------------KWDVRVKSPQ--FSDR--EW 62 (454)
T ss_pred cccCceEEEecceEEecCCCcEEEEEecceEEEEEeeccccc-ccC--------------cceEEEeCCC--CCCC--ce
Confidence 68999999999999965 889999999999999998764321 101 1245555542 2221 23
Q ss_pred eccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHH---HhCCC---CCCCEEEEEEeCC------------
Q 002206 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMT---ELGVR---FEDSISMLVSSAV------------ 640 (953)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~---~~g~~---~~~g~~i~i~s~i------------ 640 (953)
.+.++. +...+.... ........-..|+..++...+. ..+.. + .+++|+|.|+.
T Consensus 63 ~y~~~~---~~~~~~~~~----~~~~~~~~~n~fv~~ai~~~~~y~~~~~~~~~~l-~~~~itI~sd~d~ySq~~~~~~~ 134 (454)
T TIGR01219 63 LYKISL---NHLTLQSVS----ASDSRNPFVNPFIQYAIAAVHLYFDKESLHKLLL-QGLDITILGDNAYYSQPESLGTL 134 (454)
T ss_pred EEEEec---CCccceeec----ccccCCCCCChHHHHHHHHHHHHHHhcccccccc-CceEEEEEecCCcccccchhccc
Confidence 333221 000000000 0000011113466666654433 22222 3 68999998887
Q ss_pred -------CC--------CCCCchHHHHHHHHHHHHHHHhCCCC-------------CHHHHHHHHHHhhccccCC-CCCc
Q 002206 641 -------PE--------GKGVSSSASVEVASMSAIAAAHGLNI-------------HPRDLALLCQKVENHIVGA-PCGV 691 (953)
Q Consensus 641 -------P~--------g~GLgSSAA~~va~~~al~~~~~~~l-------------~~~~l~~~a~~~E~~~~G~-~sG~ 691 (953)
+. +.|||||||++||++.||+.+++..+ +++.+.++|+.+|...||+ +||
T Consensus 135 ~~~~~f~~~~~~~~e~~K~GLGSSAAvtVa~v~ALl~~~~~~~~~~~~~~~~~~~~~~~~i~kLA~~ah~~~qGk~GSG- 213 (454)
T TIGR01219 135 APFASITFNAAEKPEVAKTGLGSSAAMTTALVAALLHYLGVVDLSDPDKEGKFGCSDLDVIHNLAQTAHCLAQGKVGSG- 213 (454)
T ss_pred ccccccccccccCCCccccCccHHHHHHHHHHHHHHHHhCCcccccccccccccccCHHHHHHHHHHHHHhhcCCCCCc-
Confidence 22 68999999999999999999999876 7889999999999999996 688
Q ss_pred cchhhhhccCcceEEEEeecCc----------------------------cceeeeecCCCeEEEEEeCCCccccC
Q 002206 692 MDQMASACGEANKLLAMVCQPA----------------------------ELLGVVEIPSHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 692 ~D~~~~~~Gg~~~~~~~~~~~~----------------------------~~~~~~~~p~~~~~vl~dsgv~~~~~ 739 (953)
.|.++++||| +++..|.+. ++ +++.+|++++|++.|||.+++|.
T Consensus 214 ~DvAaavyGg---i~Y~rfd~~~l~~~~~~~~~~~~~~~L~~~v~~~W~~~i-~~l~lP~~l~Llvgdtg~~ssT~ 285 (454)
T TIGR01219 214 FDVSAAVYGS---QRYRRFSPELISFLQVAITGLPLNEVLGTIVKGKWDNKR-TEFSLPPLMNLFMGDPGGGSSTP 285 (454)
T ss_pred hhhhhhhcCc---eEEEecChhhhhhhhccccccchhhhHHHHhccCCCCce-eeccCCCCCEEEEEcCCCCcCcH
Confidence 4999999999 456665542 11 35667889999999999999986
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=2.3e-21 Score=216.37 Aligned_cols=318 Identities=17% Similarity=0.148 Sum_probs=195.4
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCc-EEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhh
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHD-VHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAV 100 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHe-Vt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 100 (953)
..|.+.||+.++++++++|.++|++ |.++..... ......+...+.++.. +.+... .... +..+...+
T Consensus 6 ~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~-~e~~l~~~~~~~~~~I--~~~~~~----~~~~---~~~~~~~~- 74 (357)
T COG0707 6 TAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDG-LEAFLVKQYGIEFELI--PSGGLR----RKGS---LKLLKAPF- 74 (357)
T ss_pred EeCCCccchhHHHHHHHHHHhhCccEEEEeccccc-ceeeeccccCceEEEE--eccccc----ccCc---HHHHHHHH-
Confidence 4555679999999999999999995 666633211 1111111112222221 111111 0001 11111111
Q ss_pred ccHHHHHHHHHHHHHcCCCcEEEECC---CchHHHHHHHhCCcEEEE-ecCChhHHHHHHHhhhccchHHHHHHHHhhcc
Q 002206 101 APRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYS 176 (953)
Q Consensus 101 ~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~giP~I~i-s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (953)
.....+.+..+.|++++||+|++.. ...+..+|..+++|++.+ +|+....... +. ......+...|.
T Consensus 75 -~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~ank-~~-------~~~a~~V~~~f~ 145 (357)
T COG0707 75 -KLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLANK-IL-------SKFAKKVASAFP 145 (357)
T ss_pred -HHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchhHH-Hh-------HHhhceeeeccc
Confidence 1112345567789999999999864 556778889999999988 4443111100 00 000000111111
Q ss_pred ccceEEecCCCCCCCCCCceeecCcccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHHHhh---CCCCcE
Q 002206 177 HCEFLIRLPGYCPMPAFRDVIDVPLVVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY---LPSGWK 249 (953)
Q Consensus 177 ~~~~l~~~~~~~~~p~~~~v~~vg~~~~--~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll~~l---l~~~~~ 249 (953)
.. .....+ .++..+|.-++ ... .+....+..+. .++++|+|+.||+|+. .++..+. +..++.
T Consensus 146 ~~-------~~~~~~--~~~~~tG~Pvr~~~~~-~~~~~~~~~~~-~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~~~~ 214 (357)
T COG0707 146 KL-------EAGVKP--ENVVVTGIPVRPEFEE-LPAAEVRKDGR-LDKKTILVTGGSQGAKALNDLVPEALAKLANRIQ 214 (357)
T ss_pred cc-------cccCCC--CceEEecCcccHHhhc-cchhhhhhhcc-CCCcEEEEECCcchhHHHHHHHHHHHHHhhhCeE
Confidence 10 000001 12333333222 122 22222222222 2688999999999985 2333321 222454
Q ss_pred E-EEeCCCCCC-----C-CCC-eEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC--CchHHHHHH
Q 002206 250 C-LVCGASDSQ-----L-PPN-FIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF--NEEPFLRNM 319 (953)
Q Consensus 250 ~-vv~G~~~~~-----l-p~N-V~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~--~DQ~~NA~~ 319 (953)
+ ..+|..... . ..| +++.+|.++|+++|+.+|++||++|.+|+.|++++|+|+|++|++.. ++|..||+.
T Consensus 215 v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~ 294 (357)
T COG0707 215 VIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKF 294 (357)
T ss_pred EEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHH
Confidence 4 467876411 1 123 88899999999999999999999999999999999999999998755 589999999
Q ss_pred HHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHH
Q 002206 320 LEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQET 370 (953)
Q Consensus 320 l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~ 370 (953)
+++.|+|..++..+++++.+.+.|.++++++..+. ..++.+.++++.++..
T Consensus 295 l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 295 LEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLLLAL 354 (357)
T ss_pred HHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999998754432 5788888888877765
No 32
>PLN02670 transferase, transferring glycosyl groups
Probab=99.89 E-value=5.4e-21 Score=221.11 Aligned_cols=342 Identities=13% Similarity=0.146 Sum_probs=196.9
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCccccccc-C--CCceeeeeecc-c-CCcccccccccChHHHH-HHH
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEI-Q--SPRLFIRKVLL-D-CGAVQADALTVDRLASL-EKY 95 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i-~--~~~~~~~~~~~-~-~g~~~~~~~~~~~~~~~-~~~ 95 (953)
++.++.||+++++.||+.|+.+|..|||++........... . .+.+.+....+ + .|+........+..... ..+
T Consensus 12 ~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~ 91 (472)
T PLN02670 12 FPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLL 91 (472)
T ss_pred eCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccccccchhhHHHH
Confidence 68999999999999999999999999999775321000100 0 01223322110 0 12210000000111000 011
Q ss_pred HHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHHH---HH-----hh-----
Q 002206 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAE---YV-----MA----- 159 (953)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~~---~~-----~~----- 159 (953)
.. ....+.....+++.+.+|++||+|. ..|+..+|+.+|||.+.+..++-. ..+.. +. ..
T Consensus 92 ~~----~~~~~~~~~~~~l~~~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (472)
T PLN02670 92 KK----AFDLLEPPLTTFLETSKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDF 167 (472)
T ss_pred HH----HHHHhHHHHHHHHHhCCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccc
Confidence 11 1111222334455566899999997 889999999999999988543311 01100 00 00
Q ss_pred ---h---c---c------chHHHH----------HHHH---hhccccceEEecCCCC--------CCCCC-CceeecCcc
Q 002206 160 ---A---G---H------HHRSIV----------WQIA---EDYSHCEFLIRLPGYC--------PMPAF-RDVIDVPLV 202 (953)
Q Consensus 160 ---~---~---~------~~~~~~----------~~l~---~~~~~~~~l~~~~~~~--------~~p~~-~~v~~vg~~ 202 (953)
+ + . .+..+. .... .....++.++--++.. ..... +.+..|||.
T Consensus 168 ~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl 247 (472)
T PLN02670 168 TVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFL 247 (472)
T ss_pred cCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecC
Confidence 0 0 0 000000 0000 0111222222111110 00111 357788985
Q ss_pred ccc--C--C-C--C---hHHHHHHhCCCCCCcEEEEEcCCCCc-hH----hHHHhhCCCCcEEE-EeCCC-C------CC
Q 002206 203 VRR--L--H-K--S---RKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKCL-VCGAS-D------SQ 259 (953)
Q Consensus 203 ~~~--~--~-~--~---~~e~~~~l~~~~~~~vVlvs~Gs~~~-~~----~ll~~ll~~~~~~v-v~G~~-~------~~ 259 (953)
... . . . . .+++.+||+..+++++|||||||+.. .. ++...+...+..|+ +.... . ..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~ 327 (472)
T PLN02670 248 PPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEM 327 (472)
T ss_pred CccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhc
Confidence 431 1 0 0 1 14577899877678999999999865 21 23333433333222 22211 1 12
Q ss_pred CCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcE
Q 002206 260 LPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGG 326 (953)
Q Consensus 260 lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g 326 (953)
+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+.||+++++.|+|
T Consensus 328 lp~~f~~~~~~rG~vv---~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~g~G 402 (472)
T PLN02670 328 LPDGFEERVKGRGMIH---VGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFP--VLNEQGLNTRLLHGKKLG 402 (472)
T ss_pred CChHHHHhccCCCeEE---eCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCc--chhccHHHHHHHHHcCee
Confidence 5655 333 36888 89987 677999999999999999999999999 899999999999999999
Q ss_pred EEEecCC----CChhhHHHHHHHHHhCCC--Ccc----------CCCCHHHHHHHHHHHHHc
Q 002206 327 VEMIRRD----LLTGHWKPYLERAISLKP--CYE----------GGINGGEVAAHILQETAI 372 (953)
Q Consensus 327 ~~l~~~d----l~~~~l~~al~~ll~~~~--~~~----------~~~~g~~~~A~~i~~~l~ 372 (953)
+.+...+ ++.+++.++|++++.+++ .|+ ....++.++|+.+++++.
T Consensus 403 v~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 403 LEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred EEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHH
Confidence 9997533 788999999999997642 222 356666666666666654
No 33
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.89 E-value=2.3e-21 Score=227.41 Aligned_cols=340 Identities=15% Similarity=0.133 Sum_probs=189.1
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcc-cccccC-----CCc--eeeeeeccc---CCcccc-cccc-cC-
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ-----SPR--LFIRKVLLD---CGAVQA-DALT-VD- 87 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~-~~~~i~-----~~~--~~~~~~~~~---~g~~~~-~~~~-~~- 87 (953)
++.+|.||++|++.||+.|+.+|++|||+++..... ...... .+. +.+....+. .++... .... .+
T Consensus 11 vp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~~~~~~~ 90 (482)
T PLN03007 11 FPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCENVDFITS 90 (482)
T ss_pred ECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCccccccccc
Confidence 689999999999999999999999999998753211 010000 010 011110000 111100 0000 00
Q ss_pred --hHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCC-hh--HHH---HHH--
Q 002206 88 --RLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD--FIY---AEY-- 156 (953)
Q Consensus 88 --~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~-~~--~~~---~~~-- 156 (953)
.......+..+. .....+.....+.++..+||+||+|. ..|+..+|+.+|||.+.+...+ +. ..+ ..+
T Consensus 91 ~~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~ 169 (482)
T PLN03007 91 NNNDDSGDLFLKFL-FSTKYFKDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQ 169 (482)
T ss_pred ccccchHHHHHHHH-HHHHHHHHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccc
Confidence 000001111111 11222333445556667899999997 7899999999999998774322 00 000 000
Q ss_pred -----------Hhhhc-------------cchHHHHHH---HHhhccccceEEecCCC---C-----CCCCC-CceeecC
Q 002206 157 -----------VMAAG-------------HHHRSIVWQ---IAEDYSHCEFLIRLPGY---C-----PMPAF-RDVIDVP 200 (953)
Q Consensus 157 -----------~~~~~-------------~~~~~~~~~---l~~~~~~~~~l~~~~~~---~-----~~p~~-~~v~~vg 200 (953)
.+... +....+... .......++.++.-++. . ..+.. ..+..||
T Consensus 170 ~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VG 249 (482)
T PLN03007 170 KKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIG 249 (482)
T ss_pred cccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEc
Confidence 00000 000000001 11111222222211110 0 00111 3477788
Q ss_pred cccc-c---------CCC---ChHHHHHHhCCCCCCcEEEEEcCCCCch--H---hHHHhhCCCCcEE-EEeCCC-C---
Q 002206 201 LVVR-R---------LHK---SRKEVRKELGIEDDVKLLILNFGGQPAG--W---KLKEEYLPSGWKC-LVCGAS-D--- 257 (953)
Q Consensus 201 ~~~~-~---------~~~---~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~---~ll~~ll~~~~~~-vv~G~~-~--- 257 (953)
|... . ++. .++++.+||+..+++++|||||||.... . ++..++...++.| .+.+.. .
T Consensus 250 Pl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~ 329 (482)
T PLN03007 250 PLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGE 329 (482)
T ss_pred cccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccc
Confidence 8432 1 101 2356788998766788999999998652 2 3333443334433 233321 0
Q ss_pred --CCC---------CCCeEECCCCCCHH--HHHhhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH-
Q 002206 258 --SQL---------PPNFIKLPKDAYTP--DFMAAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE- 321 (953)
Q Consensus 258 --~~l---------p~NV~v~~~~~~~p--dlLa~a--DlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~- 321 (953)
..+ +.|+.+. .|+| ++|+|+ .+||||||+||++|++++|||+|++| .+.||+.||++++
T Consensus 330 ~~~~lp~~~~~r~~~~g~~v~---~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P--~~~DQ~~na~~~~~ 404 (482)
T PLN03007 330 KEEWLPEGFEERTKGKGLIIR---GWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWP--VGAEQFYNEKLVTQ 404 (482)
T ss_pred hhhcCCHHHHHHhccCCEEEe---cCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeecc--chhhhhhhHHHHHH
Confidence 013 4466764 4777 899985 66999999999999999999999999 7999999999886
Q ss_pred --HcCcEEEE------ecCCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 322 --FYQGGVEM------IRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 322 --~~G~g~~l------~~~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
+.|+++.. +...++.+.+.++|++++.++ .....++.|..|.+.++
T Consensus 405 ~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~-----~~~~~r~~a~~~~~~a~ 458 (482)
T PLN03007 405 VLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGE-----EAEERRLRAKKLAEMAK 458 (482)
T ss_pred hhcceeEeccccccccccCcccHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHH
Confidence 34555432 335678899999999999764 23355566666666543
No 34
>PLN02210 UDP-glucosyl transferase
Probab=99.89 E-value=8.5e-21 Score=220.21 Aligned_cols=334 Identities=15% Similarity=0.134 Sum_probs=195.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHH--HHHCCCcEEEEeCCCCcccccccC--CCceeeeeecccCCcccccccccChHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRN--LISAGHDVHVVTGAPDFVFTSEIQ--SPRLFIRKVLLDCGAVQADALTVDRLAS 91 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~--L~~rGHeVt~is~~~~~~~~~~i~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 91 (953)
.++++ ++.++.||+++++.||+. |+.+|+.|||+++.......+... .+.+.+... ..|+.. ....+..
T Consensus 9 ~hvv~-~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~--~~glp~--~~~~~~~-- 81 (456)
T PLN02210 9 THVLM-VTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFF--SDGLPK--DDPRAPE-- 81 (456)
T ss_pred CEEEE-eCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEEC--CCCCCC--CcccCHH--
Confidence 34433 689999999999999999 569999999997753111111110 112332221 112211 0101111
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHHHHH------hh---
Q 002206 92 LEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAEYV------MA--- 159 (953)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~~~~------~~--- 159 (953)
.+... ..........+.+.+.+||+||+|. .+|+..+|+.+|||.+.+...+.. ..+..+. ..
T Consensus 82 --~~~~~---~~~~~~~~l~~~l~~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~ 156 (456)
T PLN02210 82 --TLLKS---LNKVGAKNLSKIIEEKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLED 156 (456)
T ss_pred --HHHHH---HHHhhhHHHHHHHhcCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccc
Confidence 11111 1112223334566667899999997 789999999999999877332211 0111010 00
Q ss_pred -------hc-c--ch-H--------------HHHHHHHhhccccceEEecCCCCC-------CCCCCceeecCccccc--
Q 002206 160 -------AG-H--HH-R--------------SIVWQIAEDYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVVRR-- 205 (953)
Q Consensus 160 -------~~-~--~~-~--------------~~~~~l~~~~~~~~~l~~~~~~~~-------~p~~~~v~~vg~~~~~-- 205 (953)
++ . .. + ...+.+......++.++.-++... ....+++..|||....
T Consensus 157 ~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~ 236 (456)
T PLN02210 157 LNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFL 236 (456)
T ss_pred cCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhh
Confidence 00 0 00 0 001011111222333332221110 0112468889995421
Q ss_pred --CC-------------CChHHHHHHhCCCCCCcEEEEEcCCCCch-H----hHHHhhCCCCcEEE-EeCCCC----CC-
Q 002206 206 --LH-------------KSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCL-VCGASD----SQ- 259 (953)
Q Consensus 206 --~~-------------~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~----~ll~~ll~~~~~~v-v~G~~~----~~- 259 (953)
.. ...+++.+|++..+++++|||||||.... . ++..++...++.|+ +++... ..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~ 316 (456)
T PLN02210 237 LGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQV 316 (456)
T ss_pred cCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhh
Confidence 00 01234567888766778999999998652 2 33334444455433 333211 11
Q ss_pred ----C-CCCeEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEE
Q 002206 260 ----L-PPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEM 329 (953)
Q Consensus 260 ----l-p~NV~v~~~~~~~p--dlLa~aD--lfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~-~G~g~~l 329 (953)
. +++..+ +.|+| ++|+|++ +||||||+||++|++++|||+|++| .+.||+.||+++++ .|+|+.+
T Consensus 317 ~~~~~~~~~g~v---~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P--~~~DQ~~na~~~~~~~g~G~~l 391 (456)
T PLN02210 317 LQEMVKEGQGVV---LEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYP--SWTDQPIDARLLVDVFGIGVRM 391 (456)
T ss_pred HHhhccCCCeEE---EecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecc--cccccHHHHHHHHHHhCeEEEE
Confidence 1 245445 35777 8999865 9999999999999999999999999 78999999999997 8999998
Q ss_pred ecC----CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 330 IRR----DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 330 ~~~----dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
... .++.+++.+++++++.++ .....++.|..|.+.+
T Consensus 392 ~~~~~~~~~~~~~l~~av~~~m~~~-----~g~~~r~~a~~l~~~a 432 (456)
T PLN02210 392 RNDAVDGELKVEEVERCIEAVTEGP-----AAADIRRRAAELKHVA 432 (456)
T ss_pred eccccCCcCCHHHHHHHHHHHhcCc-----hHHHHHHHHHHHHHHH
Confidence 643 478899999999999654 2234555666666654
No 35
>PLN00414 glycosyltransferase family protein
Probab=99.88 E-value=1.2e-20 Score=217.76 Aligned_cols=342 Identities=16% Similarity=0.154 Sum_probs=196.9
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCccccc--ccCCCceeeeeecc--cCCcccccccccChHHHHHHHHH
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTS--EIQSPRLFIRKVLL--DCGAVQADALTVDRLASLEKYSE 97 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~--~i~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 97 (953)
++.++.||++|++.||+.|+.+|+.|||+++........ ....+.+.+..... ..|+........+..... ..
T Consensus 10 vPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~~---~~ 86 (446)
T PLN00414 10 YPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLPNST---KK 86 (446)
T ss_pred ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccchhhH---HH
Confidence 689999999999999999999999999998753110000 00001122211100 012111000000111100 00
Q ss_pred HhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCCh---hHHH---HHH---Hhhhcc-c--h-
Q 002206 98 TAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSW---DFIY---AEY---VMAAGH-H--H- 164 (953)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~---~~~~---~~~---~~~~~~-~--~- 164 (953)
.+......+.....+++...+||+||+|+.+|+..+|+.+|||.+.+...+- ..++ ... .+..+. . .
T Consensus 87 ~~~~a~~~l~~~l~~~L~~~~p~cVV~D~~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~~pg~p~~~~~~~ 166 (446)
T PLN00414 87 PIFDAMDLLRDQIEAKVRALKPDLIFFDFVHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPPPDYPLSKVALR 166 (446)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEECCchhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCCCCCCCCCcCcCc
Confidence 1111112223333445666789999999988999999999999988754331 0000 000 000000 0 0
Q ss_pred --H----HHH----H---HHHhhccccceEEecCCCC--------CCCCC-CceeecCcccccCC-----CChHHHHHHh
Q 002206 165 --R----SIV----W---QIAEDYSHCEFLIRLPGYC--------PMPAF-RDVIDVPLVVRRLH-----KSRKEVRKEL 217 (953)
Q Consensus 165 --~----~~~----~---~l~~~~~~~~~l~~~~~~~--------~~p~~-~~v~~vg~~~~~~~-----~~~~e~~~~l 217 (953)
+ ... . ........++.++.-++.. ..... +++..|||...... ....++-+||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WL 246 (446)
T PLN00414 167 GHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWL 246 (446)
T ss_pred hhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHH
Confidence 0 000 0 0111222333333222210 00111 35778999643211 1124577899
Q ss_pred CCCCCCcEEEEEcCCCCch--HhHHH---hhCCCCc--EEEEe---CCCC--CCCCCCeEEC----CC--CCCHH--HHH
Q 002206 218 GIEDDVKLLILNFGGQPAG--WKLKE---EYLPSGW--KCLVC---GASD--SQLPPNFIKL----PK--DAYTP--DFM 277 (953)
Q Consensus 218 ~~~~~~~vVlvs~Gs~~~~--~~ll~---~ll~~~~--~~vv~---G~~~--~~lp~NV~v~----~~--~~~~p--dlL 277 (953)
+..+++++|||||||.... .++.+ .|...+. ..++- |... ..+|+|+... +. ..|+| ++|
T Consensus 247 D~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL 326 (446)
T PLN00414 247 NGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLIL 326 (446)
T ss_pred hcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHh
Confidence 9888889999999998763 33433 3332333 33332 2111 1266665322 11 25888 899
Q ss_pred hhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH-HcCcEEEEecC---CCChhhHHHHHHHHHhCCC
Q 002206 278 AAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 278 a~a--DlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~-~~G~g~~l~~~---dl~~~~l~~al~~ll~~~~ 351 (953)
+|. ++||||||+||++|++++|||+|++| .+.||+.||++++ ..|+|+.+... .++.+.+.+++++++.++.
T Consensus 327 ~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~ 404 (446)
T PLN00414 327 SHPSVGCFVNHCGFGSMWESLVSDCQIVFIP--QLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDS 404 (446)
T ss_pred cCCccceEEecCchhHHHHHHHcCCCEEecC--cccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCCh
Confidence 875 88999999999999999999999999 7999999999996 68999999653 3788999999999996541
Q ss_pred CccCCCCHHHHHHHHHHHHH
Q 002206 352 CYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 352 ~~~~~~~g~~~~A~~i~~~l 371 (953)
......++.|..|.+.+
T Consensus 405 ---e~g~~~r~~a~~~~~~~ 421 (446)
T PLN00414 405 ---EIGNLVKRNHKKLKETL 421 (446)
T ss_pred ---hhHHHHHHHHHHHHHHH
Confidence 12234566777777664
No 36
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.87 E-value=3.6e-21 Score=213.84 Aligned_cols=265 Identities=13% Similarity=0.181 Sum_probs=183.5
Q ss_pred EEEEcCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l----~GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.++||||||| +|+|.| |++..++.++|+++.++.++++++.. +.+.+..
T Consensus 4 ~~~~apakiNL~L~i~g~~~dGy~~l~~~~~~i~l~d~v~v~~~~~~~---------------------~~~~~~~---- 58 (312)
T PRK02534 4 YTLIAPAKINLHLEILGDRPDGFHELAMVMQSIDLADRLELRNNGDGT---------------------IRLHCDH---- 58 (312)
T ss_pred EEEEeceEEEeccccCccCCCCCCceEEEEEECCCCCEEEEEECCCCc---------------------EEEEECC----
Confidence 56789999999 799999 99999999999999999998875432 2221100
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
..++ ....|++..++..++++++.+. .|++|.|.++||.++|||||||.
T Consensus 59 -----~~~~-------------------------~~~~n~~~~~~~~~~~~~~~~~-~~~~i~i~~~IP~~~GLGSssa~ 107 (312)
T PRK02534 59 -----PQLS-------------------------TDDDNLIYRAAQLLRKRFPFAE-GGVDITLEKRIPIGAGLAGGSTD 107 (312)
T ss_pred -----CCCC-------------------------CCchhHHHHHHHHHHHHhCCCC-CCeEEEEecCCCCcCCccHHHHH
Confidence 0000 1125778888877777777653 68999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEE-e
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI-D 731 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~-d 731 (953)
++|++.|++.+++.++++++++++|.++|. |..++++||. .+ .....+..++++.|+++.++++ +
T Consensus 108 ~~A~~~al~~~~~~~l~~~~l~~~a~~~g~----------dv~~~~~GG~---~~-~~~~g~~~~~~~~~~~~~~vv~~~ 173 (312)
T PRK02534 108 AAAVLVGLNLLWGLGLTQPELESLAAELGS----------DVPFCIAGGT---QL-CFGRGEILEPLPDLDGLGVVLAKY 173 (312)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------CCcEEeECCe---EE-EECCCCEeEECCCCCCcEEEEEEC
Confidence 999999999999999999999999988752 6678899984 22 2322232356666778888886 7
Q ss_pred CCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhh
Q 002206 732 SGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAK 811 (953)
Q Consensus 732 sgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 811 (953)
++..-+|.. +... ++ +
T Consensus 174 p~~~~~T~~---------------a~~~-------------------------------------~~------------~ 189 (312)
T PRK02534 174 PSLSVSTPW---------------AYKT-------------------------------------YR------------Q 189 (312)
T ss_pred CCCCccHHH---------------HHHH-------------------------------------Hh------------h
Confidence 877755531 0000 00 0
Q ss_pred cCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhc
Q 002206 812 NIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSAC 891 (953)
Q Consensus 812 ~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~ 891 (953)
.+|+... ........+.+..|......+|..+ |++.+++.| |+.|+..
T Consensus 190 ~~~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~al~~~----d~~~~~~~~---~n~l~~~ 237 (312)
T PRK02534 190 QFGDTYL-------------------------SDEEDFEQRRQALRSGPLLQAISAK----DPPPIAQLL---HNDLEKV 237 (312)
T ss_pred hcccccc-------------------------cCcccccccccccchhHHHHhhhcc----CHHHHHHhh---hCchHHH
Confidence 1111000 0000000111223344566677765 888888766 7777774
Q ss_pred CC-CCchHHHHHHHHH-HhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 892 GL-GSDGTDRLVQLVQ-EIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 892 ~v-s~~~ld~lv~~a~-~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
-+ .+|+++++++.++ + .|++|+.|||+| .|++++.++
T Consensus 238 ~~~~~~~i~~~~~~l~~~-----------~Ga~~~~lSGsG--ptv~~l~~~ 276 (312)
T PRK02534 238 VLPEYPQVAKLLELLSSL-----------PGCLGTMMSGSG--PTCFALFES 276 (312)
T ss_pred hHhcChHHHHHHHHHHhc-----------cCCCeeEEECcC--cceEEEeCC
Confidence 33 6788888887776 5 689999999877 999888765
No 37
>PLN02764 glycosyltransferase family protein
Probab=99.87 E-value=4.7e-20 Score=211.65 Aligned_cols=346 Identities=14% Similarity=0.089 Sum_probs=197.7
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccC-CC-c--eeeeeecccCCcccccccccChH-H
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-SP-R--LFIRKVLLDCGAVQADALTVDRL-A 90 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~-~~-~--~~~~~~~~~~g~~~~~~~~~~~~-~ 90 (953)
++|++ ++.++.||+++++.||+.|+.+|+.|||++............ .+ . +.+.+.....|+........+.. .
T Consensus 6 ~Hvvl-~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~ 84 (453)
T PLN02764 6 FHVLM-YPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPVT 84 (453)
T ss_pred cEEEE-ECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCChh
Confidence 45533 589999999999999999999999999997753211111010 01 1 11111111012211000000001 0
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCChh--HHHHH---H----Hhhhc
Q 002206 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWD--FIYAE---Y----VMAAG 161 (953)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~~--~~~~~---~----~~~~~ 161 (953)
....+... ...+.....++|++.+||+||+|+..|+..+|+.+|||.+.+...+-. ..+.. . .+..+
T Consensus 85 ~~~~~~~a----~~~~~~~~~~~l~~~~~~~iV~D~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp 160 (453)
T PLN02764 85 SADLLMSA----MDLTRDQVEVVVRAVEPDLIFFDFAHWIPEVARDFGLKTVKYVVVSASTIASMLVPGGELGVPPPGYP 160 (453)
T ss_pred HHHHHHHH----HHHhHHHHHHHHHhCCCCEEEECCchhHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCCCCCCCCC
Confidence 01111111 112223334556666889999999788999999999999887443210 00000 0 00000
Q ss_pred c---ch--------------------HHHHHHHHhhccccceEEecCCCCC-------C-CC-CCceeecCcccccC---
Q 002206 162 H---HH--------------------RSIVWQIAEDYSHCEFLIRLPGYCP-------M-PA-FRDVIDVPLVVRRL--- 206 (953)
Q Consensus 162 ~---~~--------------------~~~~~~l~~~~~~~~~l~~~~~~~~-------~-p~-~~~v~~vg~~~~~~--- 206 (953)
. .+ ....+.+......++.++.-+++.. . .. -+++..|||....+
T Consensus 161 ~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~ 240 (453)
T PLN02764 161 SSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKT 240 (453)
T ss_pred CCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcccc
Confidence 0 00 0001111111222223332222110 0 00 13588899964321
Q ss_pred CCChHHHHHHhCCCCCCcEEEEEcCCCCc-h-HhHHH---hhCC--CCcEEEEe---CCC--CCCCCCCeEEC--CC---
Q 002206 207 HKSRKEVRKELGIEDDVKLLILNFGGQPA-G-WKLKE---EYLP--SGWKCLVC---GAS--DSQLPPNFIKL--PK--- 269 (953)
Q Consensus 207 ~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~-~~ll~---~ll~--~~~~~vv~---G~~--~~~lp~NV~v~--~~--- 269 (953)
...++++-+||+..+++++|||||||... . .++.+ +|.. .++.+++- |.. ...+|+|+... +.
T Consensus 241 ~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v 320 (453)
T PLN02764 241 RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVV 320 (453)
T ss_pred ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcE
Confidence 11245788999988788999999999865 2 33333 3322 33444443 111 11267665432 11
Q ss_pred -CCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH-HcCcEEEEecC---CCChhhHH
Q 002206 270 -DAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHWK 340 (953)
Q Consensus 270 -~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~-~~G~g~~l~~~---dl~~~~l~ 340 (953)
..|+| ++|+| +++||||||+||++|++++|||+|++| .+.||+.||++++ ..|+|+.+... .++.+++.
T Consensus 321 ~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P--~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~ 398 (453)
T PLN02764 321 WGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVP--QLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLR 398 (453)
T ss_pred EeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCC--cccchHHHHHHHHHHhceEEEeccccCCccCHHHHH
Confidence 25888 89988 788999999999999999999999999 7999999999996 57999887543 47889999
Q ss_pred HHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 341 PYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 341 ~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
+++++++.+.. . .....++.|..|.+.+
T Consensus 399 ~av~~vm~~~~-~--~g~~~r~~a~~~~~~~ 426 (453)
T PLN02764 399 DAINSVMKRDS-E--IGNLVKKNHTKWRETL 426 (453)
T ss_pred HHHHHHhcCCc-h--hHHHHHHHHHHHHHHH
Confidence 99999997541 1 2233555556665554
No 38
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.87 E-value=4e-20 Score=212.92 Aligned_cols=331 Identities=13% Similarity=0.140 Sum_probs=191.0
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcc-cccccCCCceeeeeecccCCccccc-ccccChHHHHHHHHHHh
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQAD-ALTVDRLASLEKYSETA 99 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~-~~~~i~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 99 (953)
++.++.||+++++.||+.|+.+|+.|||+++..... ..... .+.+.+... ..|+.... ....+.. .+....
T Consensus 11 ~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~-~~~i~~~~i--pdglp~~~~~~~~~~~----~~~~~~ 83 (449)
T PLN02173 11 VPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDP-SSPISIATI--SDGYDQGGFSSAGSVP----EYLQNF 83 (449)
T ss_pred ecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCC-CCCEEEEEc--CCCCCCcccccccCHH----HHHHHH
Confidence 689999999999999999999999999998753211 11100 122333332 11221100 0000111 111110
Q ss_pred hccHHHHHHHHHHHHHc----CCC-cEEEECC-CchHHHHHHHhCCcEEEEecCC---hhHHHHHHH---------hhhc
Q 002206 100 VAPRKSILKDEVEWLNS----IKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS---WDFIYAEYV---------MAAG 161 (953)
Q Consensus 100 ~~~~~~~~~~~~~~L~~----~kp-DlVV~D~-~~~~~~~A~~~giP~I~is~~~---~~~~~~~~~---------~~~~ 161 (953)
...+.....++|++ .+| ++||+|. .+|+..+|+.+|||.+.+...+ ..-++.... +..+
T Consensus 84 ---~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~~~~~~~pg~p 160 (449)
T PLN02173 84 ---KTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKDLP 160 (449)
T ss_pred ---HHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccCCccCCCCCCC
Confidence 11112222333332 356 9999997 8899999999999998874422 111110000 0000
Q ss_pred c----ch----------HHHHHHH---HhhccccceEEecCCCCC-------CCCCCceeecCccccc--------C-C-
Q 002206 162 H----HH----------RSIVWQI---AEDYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVVRR--------L-H- 207 (953)
Q Consensus 162 ~----~~----------~~~~~~l---~~~~~~~~~l~~~~~~~~-------~p~~~~v~~vg~~~~~--------~-~- 207 (953)
. .. ......+ ......++.++.-++... ....+++..|||.... . .
T Consensus 161 ~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~ 240 (449)
T PLN02173 161 LLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDND 240 (449)
T ss_pred CCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhcccccccccc
Confidence 0 00 0011111 111223333332111100 0011357788885421 0 0
Q ss_pred --------CChHHHHHHhCCCCCCcEEEEEcCCCCc-hH----hHHHhhCCCCcEEEEe-CCC--CC-C----C-CCCeE
Q 002206 208 --------KSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKCLVC-GAS--DS-Q----L-PPNFI 265 (953)
Q Consensus 208 --------~~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~~----~ll~~ll~~~~~~vv~-G~~--~~-~----l-p~NV~ 265 (953)
...+.+.+||+..+++++|||||||... .. ++...+...+..+++- +.. .+ . . +.|+.
T Consensus 241 ~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~~~~~~~ 320 (449)
T PLN02173 241 YDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETVDKDKSL 320 (449)
T ss_pred ccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhhcCCceE
Confidence 0112477888877677899999999865 22 2333453333233332 111 11 1 1 56777
Q ss_pred ECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEecCC----CCh
Q 002206 266 KLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRD----LLT 336 (953)
Q Consensus 266 v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~-G~g~~l~~~d----l~~ 336 (953)
+. +|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+.||+++++. |+|+.+...+ ++.
T Consensus 321 i~---~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~ 395 (449)
T PLN02173 321 VL---KWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMP--QWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKR 395 (449)
T ss_pred Ee---CCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecC--chhcchHHHHHHHHHhCceEEEeecccCCcccH
Confidence 74 5777 89998 569999999999999999999999999 899999999999976 9998886432 478
Q ss_pred hhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 337 GHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 337 ~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
+.+.+++++++.++ .....++.|..|.+.++
T Consensus 396 e~v~~av~~vm~~~-----~~~~~r~~a~~~~~~a~ 426 (449)
T PLN02173 396 EEIEFSIKEVMEGE-----KSKEMKENAGKWRDLAV 426 (449)
T ss_pred HHHHHHHHHHhcCC-----hHHHHHHHHHHHHHHHH
Confidence 89999999999764 22456666677766543
No 39
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.87 E-value=6.3e-20 Score=212.19 Aligned_cols=337 Identities=13% Similarity=0.093 Sum_probs=194.2
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccc-cChHHHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEK 94 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~ 94 (953)
.++++ ++.++.||+++++.||+.|+.+|+.|||++...... ......+.+.+... ..|+.. .... ......+..
T Consensus 8 ~HVvl-vPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~-~~~~~~~~i~~~~i--p~glp~-~~~~~~~~~~~~~~ 82 (451)
T PLN02410 8 RRVVL-VPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYF-SPSDDFTDFQFVTI--PESLPE-SDFKNLGPIEFLHK 82 (451)
T ss_pred CEEEE-ECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccc-ccccCCCCeEEEeC--CCCCCc-ccccccCHHHHHHH
Confidence 44433 689999999999999999999999999997753211 11110112333221 112211 0000 111111111
Q ss_pred HHHHhhccHHHHHHHHHHHHH---cCCCcEEEECC-CchHHHHHHHhCCcEEEEecCCh-h-HHHH---HHH------h-
Q 002206 95 YSETAVAPRKSILKDEVEWLN---SIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D-FIYA---EYV------M- 158 (953)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~---~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~-~-~~~~---~~~------~- 158 (953)
.... ... .+.+.++.+. ..++++||+|. .+|+..+|+.+|||.+.+...+. . ..+. .+. +
T Consensus 83 ~~~~---~~~-~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~ 158 (451)
T PLN02410 83 LNKE---CQV-SFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPL 158 (451)
T ss_pred HHHH---hHH-HHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCc
Confidence 1100 111 1222222221 12469999997 88999999999999998855441 1 0111 000 0
Q ss_pred -h--------hcc-------chH--------HHHHHHH--hhccccceEEecCCCC--------CCCCC-CceeecCccc
Q 002206 159 -A--------AGH-------HHR--------SIVWQIA--EDYSHCEFLIRLPGYC--------PMPAF-RDVIDVPLVV 203 (953)
Q Consensus 159 -~--------~~~-------~~~--------~~~~~l~--~~~~~~~~l~~~~~~~--------~~p~~-~~v~~vg~~~ 203 (953)
. .+. .+. .+...+. .....++.++.-++.. ..... +++..|||..
T Consensus 159 ~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~ 238 (451)
T PLN02410 159 KEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLH 238 (451)
T ss_pred cccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccc
Confidence 0 000 000 0011111 0112233333212110 00111 3678899853
Q ss_pred c-c--CCCCh---HHHHHHhCCCCCCcEEEEEcCCCCch--H---hHHHhhCCCCc-EEEEeCCC------C----C-C-
Q 002206 204 R-R--LHKSR---KEVRKELGIEDDVKLLILNFGGQPAG--W---KLKEEYLPSGW-KCLVCGAS------D----S-Q- 259 (953)
Q Consensus 204 ~-~--~~~~~---~e~~~~l~~~~~~~vVlvs~Gs~~~~--~---~ll~~ll~~~~-~~vv~G~~------~----~-~- 259 (953)
. . +..+. .+..+||+..+.+++|||||||...- . ++...|...+. ++.+.... . + .
T Consensus 239 ~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f 318 (451)
T PLN02410 239 LVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEF 318 (451)
T ss_pred cccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhH
Confidence 2 1 11111 23567888776788999999998752 2 23334433332 22233211 0 1 1
Q ss_pred ---CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEec
Q 002206 260 ---LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIR 331 (953)
Q Consensus 260 ---lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~-G~g~~l~~ 331 (953)
.++|..+. +|+| ++|+| +++||||||+||++|++++|||||++| .+.||+.||+++++. |+|+.+.
T Consensus 319 ~er~~~~g~v~---~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~~~~~G~~~~- 392 (451)
T PLN02410 319 SKIISGRGYIV---KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKP--FSSDQKVNARYLECVWKIGIQVE- 392 (451)
T ss_pred HHhccCCeEEE---ccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEecc--ccccCHHHHHHHHHHhCeeEEeC-
Confidence 34566664 5777 89998 777999999999999999999999999 789999999999876 9999997
Q ss_pred CCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 332 RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 332 ~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
..++.+++.++|++++.++ .....++.|..|.+.++
T Consensus 393 ~~~~~~~v~~av~~lm~~~-----~~~~~r~~a~~l~~~~~ 428 (451)
T PLN02410 393 GDLDRGAVERAVKRLMVEE-----EGEEMRKRAISLKEQLR 428 (451)
T ss_pred CcccHHHHHHHHHHHHcCC-----cHHHHHHHHHHHHHHHH
Confidence 6788899999999999765 23356666777766543
No 40
>PLN02562 UDP-glycosyltransferase
Probab=99.86 E-value=1.1e-19 Score=210.84 Aligned_cols=324 Identities=12% Similarity=0.086 Sum_probs=187.6
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcc-cccccC-CCceeeeeecccCCcccccccccChHHHHHHHHHHh
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ-SPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETA 99 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~-~~~~i~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 99 (953)
++.++.||+++++.||+.|+.+|+.|||+++..... ....+. .+.+.+... ..+.. +....+. ..+....
T Consensus 12 vPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~l--p~g~~--~~~~~~~----~~l~~a~ 83 (448)
T PLN02562 12 VPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSI--SDGQD--DDPPRDF----FSIENSM 83 (448)
T ss_pred EcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEEC--CCCCC--CCccccH----HHHHHHH
Confidence 689999999999999999999999999998753210 111110 012333221 11211 1001111 1111110
Q ss_pred hccHHHHHHHHHHHHHc---CC-CcEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHHHH----------------
Q 002206 100 VAPRKSILKDEVEWLNS---IK-ADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAEY---------------- 156 (953)
Q Consensus 100 ~~~~~~~~~~~~~~L~~---~k-pDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~~~---------------- 156 (953)
...+.....+++++ .. +++||+|. .+|+..+|+.+|||.+.+...+.. ..+..+
T Consensus 84 ---~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (448)
T PLN02562 84 ---ENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPR 160 (448)
T ss_pred ---HHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccc
Confidence 11112222333333 22 38999997 789999999999999887543311 000000
Q ss_pred -------Hhhhcc----chH----------HHHHHHH---hhccccceEEecCCC-------------CCCCCCCceeec
Q 002206 157 -------VMAAGH----HHR----------SIVWQIA---EDYSHCEFLIRLPGY-------------CPMPAFRDVIDV 199 (953)
Q Consensus 157 -------~~~~~~----~~~----------~~~~~l~---~~~~~~~~l~~~~~~-------------~~~p~~~~v~~v 199 (953)
++.... ... .....+. .....++.++.-++. .++|..+++..|
T Consensus 161 ~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~i 240 (448)
T PLN02562 161 QLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQI 240 (448)
T ss_pred cccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEe
Confidence 000000 000 0011111 111222323221111 123445789999
Q ss_pred Ccccc-cC----CC--Ch--HHHHHHhCCCCCCcEEEEEcCCCCc--hH----hHHHhhCCCCcEEE-EeCC-----CCC
Q 002206 200 PLVVR-RL----HK--SR--KEVRKELGIEDDVKLLILNFGGQPA--GW----KLKEEYLPSGWKCL-VCGA-----SDS 258 (953)
Q Consensus 200 g~~~~-~~----~~--~~--~e~~~~l~~~~~~~vVlvs~Gs~~~--~~----~ll~~ll~~~~~~v-v~G~-----~~~ 258 (953)
||... .. .. .+ .+..+||+..+.+++|||||||+.. +. ++...+...+..|+ +... ..+
T Consensus 241 Gpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~ 320 (448)
T PLN02562 241 GPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWREGLPP 320 (448)
T ss_pred cCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCH
Confidence 99532 21 11 12 2345888876667899999999752 22 23333433333332 2321 111
Q ss_pred C----CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEE
Q 002206 259 Q----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEM 329 (953)
Q Consensus 259 ~----lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~-~G~g~~l 329 (953)
. +++|+.+. +|+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.||+++++ .|+|+.+
T Consensus 321 ~~~~~~~~~~~v~---~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~~~~~~g~g~~~ 395 (448)
T PLN02562 321 GYVERVSKQGKVV---SWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYP--VAGDQFVNCAYIVDVWKIGVRI 395 (448)
T ss_pred HHHHHhccCEEEE---ecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCC--cccchHHHHHHHHHHhCceeEe
Confidence 1 45788774 5777 89988 668999999999999999999999999 89999999999986 5888777
Q ss_pred ecCCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 330 IRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 330 ~~~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
. +++.+.+.++|++++.++ ..++.|..|.+.+
T Consensus 396 ~--~~~~~~l~~~v~~~l~~~--------~~r~~a~~l~~~~ 427 (448)
T PLN02562 396 S--GFGQKEVEEGLRKVMEDS--------GMGERLMKLRERA 427 (448)
T ss_pred C--CCCHHHHHHHHHHHhCCH--------HHHHHHHHHHHHH
Confidence 4 578889999999999653 3455556565543
No 41
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase. Members of this family of GHMP kinases were previously designated as conserved hypothetical protein YchB or as isopentenyl monophosphate kinase. It is now known, in tomato and E. coli, to encode 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, an enzyme of the deoxyxylulose phosphate pathway of terpenoid biosynthesis.
Probab=99.86 E-value=6.4e-21 Score=209.14 Aligned_cols=171 Identities=15% Similarity=0.163 Sum_probs=128.9
Q ss_pred EEEcCcceecccccccc-CCCe----eeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCC
Q 002206 499 VARAPGRLDVMGGIADY-SGSL----VLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (953)
Q Consensus 499 ~~~APGrv~l~GeH~d~-~g~~----vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 573 (953)
+++|||||||+|+|++| .+|. ++.++|+++.++.++++++.+ +++.+.
T Consensus 3 ~~~apaKiNL~l~i~~~r~dGyH~l~sl~~~i~l~d~v~i~~~~~~~---------------------i~~~~~------ 55 (293)
T TIGR00154 3 VFPSPAKLNLFLYITGKRPDGYHELQTLMQFLDLGDKIIISVRSDDD---------------------IRLLKG------ 55 (293)
T ss_pred eEeecccEEEEEecCCcCCCCCcceEEEEEEeccCcEEEEEECCCCc---------------------EEEeeC------
Confidence 46899999999999987 5666 999999999999998876543 222211
Q ss_pred CCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCC--CCCCEEEEEEeCCCCCCCCchHHH
Q 002206 574 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVR--FEDSISMLVSSAVPEGKGVSSSAS 651 (953)
Q Consensus 574 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~--~~~g~~i~i~s~iP~g~GLgSSAA 651 (953)
.+ ++ +.. .||+..++..+.+..+.+ ...|++|.|.++||.|+|||||||
T Consensus 56 ---~~--~~----------------------~~~--~nlv~~a~~~l~~~~~~~~~~~~~~~i~i~~~iP~~aGLGsssa 106 (293)
T TIGR00154 56 ---DF--DV----------------------PLE--ENLIYRAAQLLKNFANSKIKSLDGANIEIDKNIPMGAGLGGGSS 106 (293)
T ss_pred ---CC--CC----------------------CCC--CcHHHHHHHHHHHHhcccccCCCCeEEEEeccCCCCCCcchhHH
Confidence 00 10 001 288888888776666531 126899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEe
Q 002206 652 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (953)
Q Consensus 652 ~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~d 731 (953)
.++|++.|++.+++.++++++++++|.++| .|...+++||. .+..... +..++++.++++.+++++
T Consensus 107 ~aaa~l~al~~~~~~~l~~~~l~~la~~lg----------~Dv~~~~~gg~---~~~~g~g-e~~~~l~~~~~~~~vl~~ 172 (293)
T TIGR00154 107 DAATVLVGLNQLWQLGLSLEELAELGLTLG----------ADVPFFVSGHA---AFATGVG-EIITPFEDPPEKWVVIAK 172 (293)
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcceEEECCe---EEEEecC-cEEEECCCCCCcEEEEEc
Confidence 999999999999999999999999999773 37778999983 3333222 222445445678899999
Q ss_pred CCCccccC
Q 002206 732 SGIRHSVG 739 (953)
Q Consensus 732 sgv~~~~~ 739 (953)
+++.-+|.
T Consensus 173 p~~~~sT~ 180 (293)
T TIGR00154 173 PHVSISTP 180 (293)
T ss_pred CCCCcChH
Confidence 98877764
No 42
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.86 E-value=1e-19 Score=212.45 Aligned_cols=339 Identities=13% Similarity=0.098 Sum_probs=194.3
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCCCcc-cccccCCCceeeeeecccCCcccccccccChHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFV-FTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASL 92 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~~~~-~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 92 (953)
.+|++ ++.++.||++|++.|+++|+.+ ||.|||++...... .......+.+.+.... .+.........+....+
T Consensus 11 ~hVvl-vp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp--~~~p~~~~~~~~~~~~~ 87 (459)
T PLN02448 11 CHVVA-MPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIP--NVIPSELVRAADFPGFL 87 (459)
T ss_pred cEEEE-ECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECC--CCCCCccccccCHHHHH
Confidence 45543 5888999999999999999999 99999998753211 1110001234443321 11110000011111111
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHhCCcEEEEecCCh--hHHHHHH-----------
Q 002206 93 EKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW--DFIYAEY----------- 156 (953)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~--~~~~~~~----------- 156 (953)
. .+ ...+.....+++++ .++|+||.|. .+++..+|+.+|||.+.+..... ...+..+
T Consensus 88 ~---~~----~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~ 160 (459)
T PLN02448 88 E---AV----MTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPV 160 (459)
T ss_pred H---HH----HHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCC
Confidence 1 11 11112222333443 3679999996 78999999999999988754331 0001000
Q ss_pred ------------Hhhhcc----chH--------HHHHHHHh---hccccceEEecCCCC--------CCCCC-CceeecC
Q 002206 157 ------------VMAAGH----HHR--------SIVWQIAE---DYSHCEFLIRLPGYC--------PMPAF-RDVIDVP 200 (953)
Q Consensus 157 ------------~~~~~~----~~~--------~~~~~l~~---~~~~~~~l~~~~~~~--------~~p~~-~~v~~vg 200 (953)
++.... ... ...+.+.. ....++.++.-+++. ....+ +++..||
T Consensus 161 ~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iG 240 (459)
T PLN02448 161 ELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIG 240 (459)
T ss_pred ccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEec
Confidence 000000 000 00111111 111222232211110 00111 2566788
Q ss_pred ccccc--CC-------C--ChHHHHHHhCCCCCCcEEEEEcCCCCch-----HhHHHhhCCCCcEEEE-e-CCCC--CC-
Q 002206 201 LVVRR--LH-------K--SRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLV-C-GASD--SQ- 259 (953)
Q Consensus 201 ~~~~~--~~-------~--~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-----~~ll~~ll~~~~~~vv-~-G~~~--~~- 259 (953)
|.... .. . ...++.+|++..+.+++|||||||.... .++..++...++.+++ . +... .+
T Consensus 241 P~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~ 320 (459)
T PLN02448 241 PSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEASRLKEI 320 (459)
T ss_pred CcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCchhhHhHh
Confidence 74321 00 1 1136778888766778999999998542 2333445445554443 2 2211 11
Q ss_pred CCCCeEECCCCCCHH--HHHhhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEec---
Q 002206 260 LPPNFIKLPKDAYTP--DFMAAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIR--- 331 (953)
Q Consensus 260 lp~NV~v~~~~~~~p--dlLa~a--DlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~-~G~g~~l~~--- 331 (953)
.+.|+.+. +|+| ++|+|. .+||||||+||++|++++|||+|++| .+.||+.||+++++ .|+|+.+..
T Consensus 321 ~~~~~~v~---~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P--~~~DQ~~na~~v~~~~g~G~~~~~~~~ 395 (459)
T PLN02448 321 CGDMGLVV---PWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFP--LFWDQPLNSKLIVEDWKIGWRVKREVG 395 (459)
T ss_pred ccCCEEEe---ccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEecc--ccccchhhHHHHHHHhCceEEEecccc
Confidence 23577774 4777 899884 45999999999999999999999999 78999999999997 588888853
Q ss_pred --CCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 332 --RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 332 --~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
..++++.+.+++++++.++. ......++.|..|.+.++
T Consensus 396 ~~~~~~~~~l~~av~~vl~~~~---~~~~~~r~~a~~~~~~~~ 435 (459)
T PLN02448 396 EETLVGREEIAELVKRFMDLES---EEGKEMRRRAKELQEICR 435 (459)
T ss_pred cCCcCcHHHHHHHHHHHhcCCc---hhHHHHHHHHHHHHHHHH
Confidence 24688999999999997541 122355667777776554
No 43
>PLN02207 UDP-glycosyltransferase
Probab=99.86 E-value=2.5e-19 Score=207.10 Aligned_cols=344 Identities=12% Similarity=0.085 Sum_probs=195.2
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCC--CcEEEEeCCCCc--ccccccC-----CCceeeeeecccCCcccccc
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAG--HDVHVVTGAPDF--VFTSEIQ-----SPRLFIRKVLLDCGAVQADA 83 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rG--HeVt~is~~~~~--~~~~~i~-----~~~~~~~~~~~~~g~~~~~~ 83 (953)
|++.++++ ++.+|.||+++++.+|+.|+.+| ..|||++..... .....+. .+.+.+.... +........
T Consensus 1 ~~~~hvv~-~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp-~~~~~~~~~ 78 (468)
T PLN02207 1 MRNAELIF-IPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVP-ELEEKPTLG 78 (468)
T ss_pred CCCcEEEE-eCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeC-CCCCCCccc
Confidence 55556644 68999999999999999999998 899998664321 0111111 0123332211 000000000
Q ss_pred cccChHHHHHHHHHHhhccHHHHHHHHHHHHHc----CCC-cEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHHH
Q 002206 84 LTVDRLASLEKYSETAVAPRKSILKDEVEWLNS----IKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAE 155 (953)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~kp-DlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~~ 155 (953)
...+.. ..+..........+.....+.+.+ .+| ++||+|. .+|+..+|+.+|||.+.+...+.. ..+..
T Consensus 79 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~ 155 (468)
T PLN02207 79 GTQSVE---AYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQY 155 (468)
T ss_pred cccCHH---HHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHH
Confidence 000111 111111110101111112223332 134 8999996 889999999999999887443310 11100
Q ss_pred H---------Hh--h-------hc--cch-----HH-H-----HHHH---HhhccccceEEecCCC---CC-------CC
Q 002206 156 Y---------VM--A-------AG--HHH-----RS-I-----VWQI---AEDYSHCEFLIRLPGY---CP-------MP 191 (953)
Q Consensus 156 ~---------~~--~-------~~--~~~-----~~-~-----~~~l---~~~~~~~~~l~~~~~~---~~-------~p 191 (953)
+ .. . ++ ... .. + ...+ .....+++.++.-++. .+ +|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~ 235 (468)
T PLN02207 156 LADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDGYDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQ 235 (468)
T ss_pred hhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCccHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhcc
Confidence 0 00 0 00 000 00 0 0000 1112223333321111 11 24
Q ss_pred CCCceeecCcccc-cCCCC-------hHHHHHHhCCCCCCcEEEEEcCCCCch-H----hHHHhhCCCCcEEE-EeC-CC
Q 002206 192 AFRDVIDVPLVVR-RLHKS-------RKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCL-VCG-AS 256 (953)
Q Consensus 192 ~~~~v~~vg~~~~-~~~~~-------~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~----~ll~~ll~~~~~~v-v~G-~~ 256 (953)
..+++..|||... ..... .+++.+||+..+++++|||||||...- . ++...+...++.|+ +.. ..
T Consensus 236 ~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~ 315 (468)
T PLN02207 236 NYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEE 315 (468)
T ss_pred CCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 4578999999543 21111 256889998776778999999998652 2 23334433344333 333 21
Q ss_pred C--C-CC--------CCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH
Q 002206 257 D--S-QL--------PPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE 321 (953)
Q Consensus 257 ~--~-~l--------p~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~ 321 (953)
. . .+ ++|..+ +.|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+.||++++
T Consensus 316 ~~~~~~lp~~f~er~~~~g~i---~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~~~ 390 (468)
T PLN02207 316 VTNDDLLPEGFLDRVSGRGMI---CGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWP--MYAEQQLNAFLMV 390 (468)
T ss_pred ccccccCCHHHHhhcCCCeEE---EEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecC--ccccchhhHHHHH
Confidence 1 1 13 345555 35887 89998 777999999999999999999999999 8999999999887
Q ss_pred H-cCcEEEEec------C-CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 322 F-YQGGVEMIR------R-DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 322 ~-~G~g~~l~~------~-dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
+ .|+|+.+.. . .++.+++.++|++++.+ .....++.|..|.+.++
T Consensus 391 ~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~------~~~~~r~~a~~l~~~a~ 443 (468)
T PLN02207 391 KELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK------DNNVVRKRVMDISQMIQ 443 (468)
T ss_pred HHhCceEEEecccccccCCcccHHHHHHHHHHHHhc------chHHHHHHHHHHHHHHH
Confidence 6 899997742 1 24778999999999952 23356666676766543
No 44
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.86 E-value=1.8e-19 Score=208.75 Aligned_cols=331 Identities=15% Similarity=0.162 Sum_probs=192.2
Q ss_pred ecCCCcchHHHHHHHHHHHH-HCCCcEEEEeCCCCcc-c-ccccCCCceeeeeecc-cC-CcccccccccChHHHHHHHH
Q 002206 22 VTGHGFGHATRVVEVVRNLI-SAGHDVHVVTGAPDFV-F-TSEIQSPRLFIRKVLL-DC-GAVQADALTVDRLASLEKYS 96 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~-~rGHeVt~is~~~~~~-~-~~~i~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~ 96 (953)
++.++.||+++++.||+.|+ .+|+.|||++...... . ......+.+.+..... +. ++.. . ..+. ...+.
T Consensus 11 ~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~-~--~~~~---~~~~~ 84 (481)
T PLN02992 11 FSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVD-P--SAHV---VTKIG 84 (481)
T ss_pred eCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCC-C--CccH---HHHHH
Confidence 68999999999999999998 7899999997753210 0 1111111122221100 00 1100 0 0011 11111
Q ss_pred HHhhccHHHHHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHhCCcEEEEecCChhH--HHHHHH------h------h
Q 002206 97 ETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDF--IYAEYV------M------A 159 (953)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~~--~~~~~~------~------~ 159 (953)
.. ...+.....++|++ .+|++||+|. .+|+..+|+.+|||.+.+...+... .+..+. . .
T Consensus 85 ~~----~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~ 160 (481)
T PLN02992 85 VI----MREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQR 160 (481)
T ss_pred HH----HHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCC
Confidence 11 11122222344444 3689999997 7899999999999999885443110 010000 0 0
Q ss_pred -----hc-cch--HH----H-------HHHH---HhhccccceEEecCCCC-------CC------CC--CCceeecCcc
Q 002206 160 -----AG-HHH--RS----I-------VWQI---AEDYSHCEFLIRLPGYC-------PM------PA--FRDVIDVPLV 202 (953)
Q Consensus 160 -----~~-~~~--~~----~-------~~~l---~~~~~~~~~l~~~~~~~-------~~------p~--~~~v~~vg~~ 202 (953)
++ ..+ .. + ...+ ...+..++.++.-++.. .+ .. .+.+..|||.
T Consensus 161 ~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl 240 (481)
T PLN02992 161 KPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPL 240 (481)
T ss_pred CCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCc
Confidence 00 000 00 0 0000 01122333333211110 00 00 1357889996
Q ss_pred ccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCc-h-H---hHHHhhC--CCCcEEEEe----CC-------------C
Q 002206 203 VRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPA-G-W---KLKEEYL--PSGWKCLVC----GA-------------S 256 (953)
Q Consensus 203 ~~~--~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~-~---~ll~~ll--~~~~~~vv~----G~-------------~ 256 (953)
... ......++.+||+..+.+.+|||||||... . . ++...+. +..+++++- +. .
T Consensus 241 ~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~ 320 (481)
T PLN02992 241 CRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETR 320 (481)
T ss_pred cCCcCCCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccc
Confidence 542 112224577899876677899999999865 2 2 2333332 222232331 10 0
Q ss_pred C--C-CCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH
Q 002206 257 D--S-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (953)
Q Consensus 257 ~--~-~lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l 320 (953)
. . .+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+.||+++
T Consensus 321 ~~~~~~lp~~f~eR~~~rg~vv---~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P--~~~DQ~~na~~~ 395 (481)
T PLN02992 321 DNTPEYLPEGFVSRTHDRGFVV---PSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP--LFAEQNMNAALL 395 (481)
T ss_pred cchhhhCCHHHHHHhcCCCEEE---eecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecC--ccchhHHHHHHH
Confidence 0 1 15654 665 35777 89998 557999999999999999999999999 899999999999
Q ss_pred H-HcCcEEEEecC--CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 321 E-FYQGGVEMIRR--DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 321 ~-~~G~g~~l~~~--dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
+ +.|+|+.++.. .++.+.+.++|++++.++ .....++.|..|.+.++
T Consensus 396 ~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~-----~g~~~r~~a~~~~~~a~ 445 (481)
T PLN02992 396 SDELGIAVRSDDPKEVISRSKIEALVRKVMVEE-----EGEEMRRKVKKLRDTAE 445 (481)
T ss_pred HHHhCeeEEecCCCCcccHHHHHHHHHHHhcCC-----chHHHHHHHHHHHHHHH
Confidence 4 99999999763 488899999999999764 22345666666666544
No 45
>PLN02554 UDP-glycosyltransferase family protein
Probab=99.86 E-value=1.3e-19 Score=212.40 Aligned_cols=167 Identities=16% Similarity=0.187 Sum_probs=116.7
Q ss_pred CCceeecCccc--ccC-----CCChHHHHHHhCCCCCCcEEEEEcCCCCc-hH----hHHHhhCCCCcEEE-EeCCC---
Q 002206 193 FRDVIDVPLVV--RRL-----HKSRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGWKCL-VCGAS--- 256 (953)
Q Consensus 193 ~~~v~~vg~~~--~~~-----~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~~----~ll~~ll~~~~~~v-v~G~~--- 256 (953)
.+++..|||.. ..+ ...++++.+|++..+.+++|||||||+.. .. ++..++...++.|+ +....
T Consensus 237 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~ 316 (481)
T PLN02554 237 LPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPN 316 (481)
T ss_pred CCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCccc
Confidence 46788999963 222 22345788999876667899999999854 22 33334433344333 22210
Q ss_pred ----------C--CCCCC--------CeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCc
Q 002206 257 ----------D--SQLPP--------NFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNE 312 (953)
Q Consensus 257 ----------~--~~lp~--------NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~D 312 (953)
. ..+|+ |+++ ++|+| ++|+| +++||||||+||++|++++|||||++| .+.|
T Consensus 317 ~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v---~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P--~~~D 391 (481)
T PLN02554 317 IMKEPPGEFTNLEEILPEGFLDRTKDIGKV---IGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWP--LYAE 391 (481)
T ss_pred ccccccccccchhhhCChHHHHHhccCceE---EeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecC--cccc
Confidence 0 01343 4444 35888 89954 889999999999999999999999999 7999
Q ss_pred hHHHHH-HHHHcCcEEEEec-----------CCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 313 EPFLRN-MLEFYQGGVEMIR-----------RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 313 Q~~NA~-~l~~~G~g~~l~~-----------~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
|+.||+ ++++.|+|+.+.. ..++.+++.++|++++.+. ...++.|..|.+.+
T Consensus 392 Q~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~-------~~~r~~a~~l~~~~ 455 (481)
T PLN02554 392 QKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD-------SDVRKRVKEMSEKC 455 (481)
T ss_pred chhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHH
Confidence 999994 5789999999863 3578899999999999522 23455555555544
No 46
>PLN03004 UDP-glycosyltransferase
Probab=99.85 E-value=3.3e-19 Score=205.48 Aligned_cols=165 Identities=14% Similarity=0.172 Sum_probs=117.6
Q ss_pred CceeecCcccccCC---C---ChHHHHHHhCCCCCCcEEEEEcCCCCc-hH----hHHHhhCCCCc-EEEEeCCC-----
Q 002206 194 RDVIDVPLVVRRLH---K---SRKEVRKELGIEDDVKLLILNFGGQPA-GW----KLKEEYLPSGW-KCLVCGAS----- 256 (953)
Q Consensus 194 ~~v~~vg~~~~~~~---~---~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~~----~ll~~ll~~~~-~~vv~G~~----- 256 (953)
+++..|||....+. . ...+..+||+..+++++|||||||... +. ++...+...+. ++.+....
T Consensus 235 ~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~ 314 (451)
T PLN03004 235 RNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEK 314 (451)
T ss_pred CCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccc
Confidence 46888999643111 1 113477899877778899999999865 22 23333433333 22233311
Q ss_pred ----CCC-CC---------CCeEECCCCCCHH--HHHhhcCE--EEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHH
Q 002206 257 ----DSQ-LP---------PNFIKLPKDAYTP--DFMAASDC--MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRN 318 (953)
Q Consensus 257 ----~~~-lp---------~NV~v~~~~~~~p--dlLa~aDl--fIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~ 318 (953)
... +| .|+++. +|+| ++|+|+++ ||||||+||++|++++|||+|++| .+.||+.||+
T Consensus 315 ~~~~~~~~lp~gf~er~~~~g~~v~---~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P--~~~DQ~~na~ 389 (451)
T PLN03004 315 TELDLKSLLPEGFLSRTEDKGMVVK---SWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWP--LYAEQRFNRV 389 (451)
T ss_pred cccchhhhCChHHHHhccCCcEEEE---eeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEecc--ccccchhhHH
Confidence 111 45 577763 5777 89999666 999999999999999999999999 7999999999
Q ss_pred HHHH-cCcEEEEecC---CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 319 MLEF-YQGGVEMIRR---DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 319 ~l~~-~G~g~~l~~~---dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
++++ .|+|+.++.. .++.+.+.++|++++.++ ..++.|..|.+.+
T Consensus 390 ~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~--------~~r~~a~~~~~~a 438 (451)
T PLN03004 390 MIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC--------PVRERTMAMKNAA 438 (451)
T ss_pred HHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH--------HHHHHHHHHHHHH
Confidence 9985 6999999754 468899999999999643 3566666666653
No 47
>PLN02451 homoserine kinase
Probab=99.85 E-value=7.5e-20 Score=205.79 Aligned_cols=210 Identities=20% Similarity=0.258 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
.|.+..++..++++.|.+. .|++|.|.++||+|+|||||||.++|++.|++.++|.+++++++++++.++|..++|..
T Consensus 114 ~Nlv~~a~~~~~~~~g~~~-~gv~I~i~k~IP~g~GLGSSaA~avA~l~aln~l~g~~ls~~eL~~la~~~E~~v~g~h- 191 (370)
T PLN02451 114 RNCAGIAAIATMKLLGIRS-VGLSLSLHKGLPLGSGLGSSAASAAAAAVAVNELFGSPLGKDDLVLAGLESEAKVSGYH- 191 (370)
T ss_pred cCcHHHHHHHHHHHcCCCC-CCEEEEEeCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhchhcCCC-
Confidence 3566666677777777653 69999999999999999999999999999999999999999999999999999888863
Q ss_pred Cccchhh-hhccCcceEEEEe-ecCccceeeeecC--CCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccC
Q 002206 690 GVMDQMA-SACGEANKLLAMV-CQPAELLGVVEIP--SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGML 765 (953)
Q Consensus 690 G~~D~~~-~~~Gg~~~~~~~~-~~~~~~~~~~~~p--~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l 765 (953)
+||++ +++||. ++.. ..+.+. ..+++| +++.++++++++..+|.. +.+.
T Consensus 192 --~Dnva~a~~GG~---v~~~~~~~~~~-~~~~~p~~~~~~~Vlv~P~~~~sT~~---------------ar~~------ 244 (370)
T PLN02451 192 --ADNIAPALMGGF---VLIRSYEPLHL-IPLRFPSAKDLFFVLVSPDFEAPTKK---------------MRAA------ 244 (370)
T ss_pred --ccchhHhhcCCE---EEEEecCCCeE-EEeecCCCCCeEEEEEcCCCCccHHH---------------HHHH------
Confidence 79986 789983 4443 233233 345555 579999998887776642 0000
Q ss_pred cccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccc
Q 002206 766 PQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVR 845 (953)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (953)
+|+.+.
T Consensus 245 -----------------------------------------------lp~~~~--------------------------- 250 (370)
T PLN02451 245 -----------------------------------------------LPKEIP--------------------------- 250 (370)
T ss_pred -----------------------------------------------Hhhhcc---------------------------
Confidence 010000
Q ss_pred cccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHhhhcccccCCCCCccccc
Q 002206 846 APVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAK 925 (953)
Q Consensus 846 ~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGak 925 (953)
+..++. ...|+.....+|.++ |++.+|++|+..|......+.++|+++++++.+++ .|++|++
T Consensus 251 -~~~~v~-~~~~~~~l~~al~~~----d~~~l~~~m~nD~~~e~~r~~~~P~l~~l~~~~~~-----------~GA~ga~ 313 (370)
T PLN02451 251 -MKHHVW-NCSQAAALVAAILQG----DAVLLGEALSSDKIVEPTRAPLIPGMEAVKKAALE-----------AGAYGCT 313 (370)
T ss_pred -hhhHHH-HHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhHHHHhhhCccHHHHHHHHHH-----------CCCeEEE
Confidence 000111 123444566777775 89999999987644433334579999999999987 6899999
Q ss_pred ccccccCceEEEeccC
Q 002206 926 ITGGGSGGTICVIGRN 941 (953)
Q Consensus 926 ltGaG~GG~v~~l~~~ 941 (953)
|||+| .|+++|.++
T Consensus 314 mSGSG--ptvfal~~~ 327 (370)
T PLN02451 314 ISGAG--PTAVAVIDD 327 (370)
T ss_pred EEccc--hheEEEEcC
Confidence 99988 587777654
No 48
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.84 E-value=1e-18 Score=203.58 Aligned_cols=339 Identities=14% Similarity=0.096 Sum_probs=192.0
Q ss_pred eEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcc-cccccC-CCceeeeeecc-c-CCcccccccc-c-Ch
Q 002206 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ-SPRLFIRKVLL-D-CGAVQADALT-V-DR 88 (953)
Q Consensus 15 ~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~-~~~~i~-~~~~~~~~~~~-~-~g~~~~~~~~-~-~~ 88 (953)
+.++++ ++.++.||+++++.||+.|+.+|+.|||++...... ...... .+.+.+....+ . .++. ++.. . +.
T Consensus 9 ~~HVvl-~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lP--dG~~~~~~~ 85 (477)
T PLN02863 9 GTHVLV-FPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIP--SGVENVKDL 85 (477)
T ss_pred CCEEEE-ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCC--CCCcChhhc
Confidence 344533 689999999999999999999999999997753211 010000 01122211100 0 0111 0000 0 10
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHhCCcEEEEecCCh-h-HHHHHHH---hh-
Q 002206 89 LASLEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D-FIYAEYV---MA- 159 (953)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~-~-~~~~~~~---~~- 159 (953)
.... ...+.. ....+.....++|.+ .+|++||+|. .+|+..+|+.+|||.+.+...+- . ..|..+. +.
T Consensus 86 ~~~~--~~~~~~-a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~ 162 (477)
T PLN02863 86 PPSG--FPLMIH-ALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTK 162 (477)
T ss_pred chhh--HHHHHH-HHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccccc
Confidence 0000 000110 111223333445554 3679999997 88999999999999998854331 0 0110000 00
Q ss_pred --------------hc--cch--H---H----------HHHHHHhh---ccccceEEecCCCC--------CCCCC--Cc
Q 002206 160 --------------AG--HHH--R---S----------IVWQIAED---YSHCEFLIRLPGYC--------PMPAF--RD 195 (953)
Q Consensus 160 --------------~~--~~~--~---~----------~~~~l~~~---~~~~~~l~~~~~~~--------~~p~~--~~ 195 (953)
.+ ..+ . . ....+... ...++.++.-++.. ....+ ++
T Consensus 163 ~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~ 242 (477)
T PLN02863 163 INPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDR 242 (477)
T ss_pred ccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCC
Confidence 00 000 0 0 00011111 11222122111110 00111 45
Q ss_pred eeecCcccccC--C-----------CChHHHHHHhCCCCCCcEEEEEcCCCCch-----HhHHHhhCCCCcEEE-EeCCC
Q 002206 196 VIDVPLVVRRL--H-----------KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCL-VCGAS 256 (953)
Q Consensus 196 v~~vg~~~~~~--~-----------~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-----~~ll~~ll~~~~~~v-v~G~~ 256 (953)
+..|||..... . ...+++.+||+..+++++|||||||...- .++...+...++.|+ +.+..
T Consensus 243 v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~ 322 (477)
T PLN02863 243 VWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEP 322 (477)
T ss_pred eEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 77889854211 0 01346888998776788999999998652 233334544455333 44421
Q ss_pred C------CCCCC---------CeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHH
Q 002206 257 D------SQLPP---------NFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLR 317 (953)
Q Consensus 257 ~------~~lp~---------NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA 317 (953)
. ..+|+ |+++. .|+| ++|+| +++||||||+||++|++++|||+|++| .+.||+.||
T Consensus 323 ~~~~~~~~~lp~~~~~r~~~~g~~v~---~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na 397 (477)
T PLN02863 323 VNEESDYSNIPSGFEDRVAGRGLVIR---GWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWP--MAADQFVNA 397 (477)
T ss_pred cccccchhhCCHHHHHHhccCCEEec---CCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCC--ccccchhhH
Confidence 1 12454 45553 5777 89987 999999999999999999999999999 789999999
Q ss_pred HHHH-HcCcEEEEecC---CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 318 NMLE-FYQGGVEMIRR---DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 318 ~~l~-~~G~g~~l~~~---dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
++++ ..|+|+.+... ..+.+++..++.+++.. ....++.|..|.+.+
T Consensus 398 ~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~-------~~~~r~~a~~l~e~a 448 (477)
T PLN02863 398 SLLVDELKVAVRVCEGADTVPDSDELARVFMESVSE-------NQVERERAKELRRAA 448 (477)
T ss_pred HHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHH
Confidence 9976 57999998542 24677888899888732 235566666666654
No 49
>PLN02555 limonoid glucosyltransferase
Probab=99.84 E-value=1.2e-18 Score=202.36 Aligned_cols=333 Identities=16% Similarity=0.120 Sum_probs=187.7
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCc-cccc--cc-----C---CCceeeeeecccCCcccccccccChHH
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTS--EI-----Q---SPRLFIRKVLLDCGAVQADALTVDRLA 90 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~-~~~~--~i-----~---~~~~~~~~~~~~~g~~~~~~~~~~~~~ 90 (953)
++.++.||+++++.||+.|+.+|..|||++..... .... .+ . .+.+.+... ..|+........+.
T Consensus 13 ~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~--pdglp~~~~~~~~~-- 88 (480)
T PLN02555 13 VSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFF--EDGWAEDDPRRQDL-- 88 (480)
T ss_pred ECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeC--CCCCCCCcccccCH--
Confidence 68999999999999999999999999999775311 1010 00 0 011222221 11221100000011
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHH-cCCC-cEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHHHHHh------h
Q 002206 91 SLEKYSETAVAPRKSILKDEVEWLN-SIKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAEYVM------A 159 (953)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~-~~kp-DlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~~~~~------~ 159 (953)
..+...........+.+.++.+. ..+| ++||+|. .+|+..+|+.+|||.+.+...+.. ..+..+.. .
T Consensus 89 --~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~ 166 (480)
T PLN02555 89 --DLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPT 166 (480)
T ss_pred --HHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCccc
Confidence 11111100001111222222222 1345 9999997 889999999999999887433211 11111100 0
Q ss_pred h------------cc----ch----------HHHHHHHH---hhccccceEEecCCCC--------CCCCCCceeecCcc
Q 002206 160 A------------GH----HH----------RSIVWQIA---EDYSHCEFLIRLPGYC--------PMPAFRDVIDVPLV 202 (953)
Q Consensus 160 ~------------~~----~~----------~~~~~~l~---~~~~~~~~l~~~~~~~--------~~p~~~~v~~vg~~ 202 (953)
. +. ++ ......+. .....++.++.-++.. .....+ +..|||.
T Consensus 167 ~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl 245 (480)
T PLN02555 167 ETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPL 245 (480)
T ss_pred ccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcc
Confidence 0 00 00 00011111 1112223333212210 001123 7788885
Q ss_pred ccc---C-C-------CChHHHHHHhCCCCCCcEEEEEcCCCCc-h----HhHHHhhCCCCcEEE-EeCC------CC--
Q 002206 203 VRR---L-H-------KSRKEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSGWKCL-VCGA------SD-- 257 (953)
Q Consensus 203 ~~~---~-~-------~~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~----~~ll~~ll~~~~~~v-v~G~------~~-- 257 (953)
... + . ...+++.+||+..+.+++|||||||+.. . .++...+...+..|+ ++.+ ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~ 325 (480)
T PLN02555 246 FKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPH 325 (480)
T ss_pred cCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhh
Confidence 421 1 0 1134677888876666799999999765 1 233334544444443 2221 00
Q ss_pred --C-C----CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-Cc
Q 002206 258 --S-Q----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QG 325 (953)
Q Consensus 258 --~-~----lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~-G~ 325 (953)
+ . +++|+.+. .|+| ++|+| +++||||||+||++||+++|||||++| .+.||+.|++++++. |+
T Consensus 326 ~lp~~~~~~~~~~g~v~---~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P--~~~DQ~~Na~~~~~~~gv 400 (480)
T PLN02555 326 VLPEEFLEKAGDKGKIV---QWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFP--QWGDQVTDAVYLVDVFKT 400 (480)
T ss_pred cCChhhhhhcCCceEEE---ecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCC--CccccHHHHHHHHHHhCc
Confidence 1 1 23566663 5777 78966 999999999999999999999999999 799999999999887 99
Q ss_pred EEEEe-----cCCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 326 GVEMI-----RRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 326 g~~l~-----~~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
|+.+. ...++.+.+..+|++++.++ .....++-|..|.+.+
T Consensus 401 Gv~l~~~~~~~~~v~~~~v~~~v~~vm~~~-----~g~~~r~ra~~l~~~a 446 (480)
T PLN02555 401 GVRLCRGEAENKLITREEVAECLLEATVGE-----KAAELKQNALKWKEEA 446 (480)
T ss_pred eEEccCCccccCcCcHHHHHHHHHHHhcCc-----hHHHHHHHHHHHHHHH
Confidence 99994 34578889999999999654 2234555556665543
No 50
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.84 E-value=1.3e-19 Score=215.54 Aligned_cols=185 Identities=18% Similarity=0.242 Sum_probs=136.1
Q ss_pred CCCCCCceeecCccccc-CC---CChHHHHHHhCCCCCCcEEEEEcCCCCc----hH----hHHHhhCC-CCcEEEE-eC
Q 002206 189 PMPAFRDVIDVPLVVRR-LH---KSRKEVRKELGIEDDVKLLILNFGGQPA----GW----KLKEEYLP-SGWKCLV-CG 254 (953)
Q Consensus 189 ~~p~~~~v~~vg~~~~~-~~---~~~~e~~~~l~~~~~~~vVlvs~Gs~~~----~~----~ll~~ll~-~~~~~vv-~G 254 (953)
++|..+++++|||.... .. +++++|.+.+... ..++|||||||+.. +. .+..++.. +++.|++ ..
T Consensus 240 ~~~~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~-~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~ 318 (496)
T KOG1192|consen 240 PRPLLPKVIPIGPLHVKDSKQKSPLPLEWLDILDES-RHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYR 318 (496)
T ss_pred CCCCCCCceEECcEEecCccccccccHHHHHHHhhc-cCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEec
Confidence 45556889999994432 21 1466777776632 45899999999973 22 23333433 3554443 22
Q ss_pred CC-C----CCC----CCCeEECCCCCCHH--HHH-hh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH
Q 002206 255 AS-D----SQL----PPNFIKLPKDAYTP--DFM-AA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (953)
Q Consensus 255 ~~-~----~~l----p~NV~v~~~~~~~p--dlL-a~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l 320 (953)
.. . ..+ +.||.. .+|+| ++| +| +++||||||+|||+|++++|||||++| .|+||+.||+++
T Consensus 319 ~~~~~~~~~~~~~~~~~nV~~---~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~P--lf~DQ~~Na~~i 393 (496)
T KOG1192|consen 319 PDDSIYFPEGLPNRGRGNVVL---SKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVP--LFGDQPLNARLL 393 (496)
T ss_pred CCcchhhhhcCCCCCcCceEE---ecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCC--ccccchhHHHHH
Confidence 21 1 123 347776 45888 654 43 899999999999999999999999999 899999999999
Q ss_pred HHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc-----------CCCCHHHHHHHHHHHHHccCCCcCCCCchhhhhH
Q 002206 321 EFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-----------GGINGGEVAAHILQETAIGKNYASDKLSGARRLR 388 (953)
Q Consensus 321 ~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~-----------~~~~g~~~~A~~i~~~l~~~~~~~~~~~ga~~Lr 388 (953)
++.|.+.++...++....+..++.+++.++ .|. +++..+ +.+.+|.++ +.++.++.+|+
T Consensus 394 ~~~g~~~v~~~~~~~~~~~~~~~~~il~~~-~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~-------~~~~~~~~~l~ 463 (496)
T KOG1192|consen 394 VRHGGGGVLDKRDLVSEELLEAIKEILENE-EYKEAAKRLSEILRDQPISP-ELAVKWVEF-------VARHGGAKHLK 463 (496)
T ss_pred HhCCCEEEEehhhcCcHHHHHHHHHHHcCh-HHHHHHHHHHHHHHcCCCCH-HHHHHHHHH-------HHhcCCCcccC
Confidence 999999999999887777888999998766 332 577777 888888888 67788888887
No 51
>TIGR01920 Shik_kin_archae shikimate kinase. This model represents the shikimate kinase (SK) gene found in archaea which is only distantly related to homoserine kinase (thrB) and not atr all to the bacterial SK enzyme. The SK from M. janaschii has been overexpressed in E. coli and characterized. SK catalyzes the fifth step of the biosynthesis of chorismate from D-erythrose-4-phosphate and phosphoenolpyruvate.
Probab=99.83 E-value=4.7e-19 Score=191.00 Aligned_cols=118 Identities=18% Similarity=0.220 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccC-CCC
Q 002206 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVG-APC 689 (953)
Q Consensus 611 ~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G-~~s 689 (953)
|++..++..+.+.++.+ .|++|++.++||+++|||||||+++|++.|++.+++.++++++++++|+++|+..++ ..+
T Consensus 46 n~i~~~~~~~~~~~~~~--~g~~i~i~s~iP~~~GLGSSaA~~~a~~~al~~~~~~~l~~~~l~~la~~~e~~~~~~~~~ 123 (261)
T TIGR01920 46 RLIERILTAIRSKFGIV--DGLEVEVESEIPAGSGLKSSSALVNALVEAVLKAKGVEIDDIDILRLGARLSKDAGLSVTG 123 (261)
T ss_pred HHHHHHHHHHHHhcCCC--CCEEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCC
Confidence 67777777777666643 699999999999999999999999999999999999999999999999999988764 356
Q ss_pred CccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCC
Q 002206 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGI 734 (953)
Q Consensus 690 G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv 734 (953)
|.+|++++++|| +++.+.++....+..+. +...++++.++.
T Consensus 124 ~~~D~~~~~~gG---~~~~~~~~~~~~~~~~~-~~~~~vv~~p~~ 164 (261)
T TIGR01920 124 AFDDAAASYLGG---IVITDNRRMKILKRDKL-EGCTAAVLVPKE 164 (261)
T ss_pred cHHHHHHHHhCC---EEEEeCCCceEEEecCC-CCceEEEEECCC
Confidence 668999999999 45555444322223333 345677776654
No 52
>PLN00164 glucosyltransferase; Provisional
Probab=99.83 E-value=2.4e-18 Score=200.99 Aligned_cols=340 Identities=12% Similarity=0.066 Sum_probs=193.7
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCC----CcEEEEeCCCCcc-----cccccC-----CCceeeeeecccCCc
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAG----HDVHVVTGAPDFV-----FTSEIQ-----SPRLFIRKVLLDCGA 78 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rG----HeVt~is~~~~~~-----~~~~i~-----~~~~~~~~~~~~~g~ 78 (953)
|++.++++ ++.++.||+++++.||+.|+.+| +.|||++...... ....+. .+.+.+... ..+.
T Consensus 1 ~~~~HVVl-vPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l--p~~~ 77 (480)
T PLN00164 1 MAAPTVVL-LPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHL--PAVE 77 (480)
T ss_pred CCCCEEEE-eCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEEC--CCCC
Confidence 45556644 68999999999999999999997 6899987643110 011010 001222221 1111
Q ss_pred ccccccccChHHHHHHHHHHhhccHHHHHHHHHHHHHcC--CCcEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHH
Q 002206 79 VQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIY 153 (953)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~ 153 (953)
.. . ... .....+..+ .........++|.+. ++++||+|. ..|+..+|+.+|||.+.+...+.. ..+
T Consensus 78 ~p-~--~~e--~~~~~~~~~----~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~ 148 (480)
T PLN00164 78 PP-T--DAA--GVEEFISRY----IQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALM 148 (480)
T ss_pred CC-C--ccc--cHHHHHHHH----HHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHH
Confidence 10 0 000 011111111 111222223445543 459999997 789999999999999988543310 001
Q ss_pred HHH-------------------Hhhhc----cchH--------HHHHHH---HhhccccceEEecCCCC-----------
Q 002206 154 AEY-------------------VMAAG----HHHR--------SIVWQI---AEDYSHCEFLIRLPGYC----------- 188 (953)
Q Consensus 154 ~~~-------------------~~~~~----~~~~--------~~~~~l---~~~~~~~~~l~~~~~~~----------- 188 (953)
..+ ++... .++. .....+ ......++.++.-++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~ 228 (480)
T PLN00164 149 LRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIAD 228 (480)
T ss_pred hhhhhhcccccCcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHh
Confidence 000 00000 0000 000111 11122233333211110
Q ss_pred C--CC--CCCceeecCccccc---C--CCChHHHHHHhCCCCCCcEEEEEcCCCCch--H---hHHHhhCCCCcEEE-Ee
Q 002206 189 P--MP--AFRDVIDVPLVVRR---L--HKSRKEVRKELGIEDDVKLLILNFGGQPAG--W---KLKEEYLPSGWKCL-VC 253 (953)
Q Consensus 189 ~--~p--~~~~v~~vg~~~~~---~--~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~---~ll~~ll~~~~~~v-v~ 253 (953)
. .+ ..+++..|||.... + ....+++.+||+..+..++|||||||.... . ++...+...+..|+ +.
T Consensus 229 ~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~ 308 (480)
T PLN00164 229 GRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVL 308 (480)
T ss_pred ccccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 0 01 12578889996421 1 122356889998776778999999997542 1 23334433344332 32
Q ss_pred C-CCC-----------C-CCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeC
Q 002206 254 G-ASD-----------S-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (953)
Q Consensus 254 G-~~~-----------~-~lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~ 307 (953)
. ... . .+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v---~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P- 384 (480)
T PLN00164 309 RGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVW---PTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWP- 384 (480)
T ss_pred cCCcccccccccccchhhhCChHHHHHhcCCCeEE---eecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCC-
Confidence 2 110 0 14555 333 25787 89998 458999999999999999999999999
Q ss_pred CCCCchHHHHHHHH-HcCcEEEEecC-----CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 308 DYFNEEPFLRNMLE-FYQGGVEMIRR-----DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 308 ~~~~DQ~~NA~~l~-~~G~g~~l~~~-----dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
.+.||+.||++++ ..|+|+.+... .++.+.+..+|++++.++ .+ .....++.|..|.+.+.
T Consensus 385 -~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~-~~--~~~~~r~~a~~~~~~~~ 451 (480)
T PLN00164 385 -LYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGG-EE--EGRKAREKAAEMKAACR 451 (480)
T ss_pred -ccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCC-ch--hHHHHHHHHHHHHHHHH
Confidence 8999999999875 57999998532 257889999999999764 11 12356666666666543
No 53
>PLN02167 UDP-glycosyltransferase family protein
Probab=99.83 E-value=2.2e-18 Score=201.79 Aligned_cols=152 Identities=14% Similarity=0.217 Sum_probs=110.4
Q ss_pred CCceeecCcccc-cC---CC----ChHHHHHHhCCCCCCcEEEEEcCCCCc-h----HhHHHhhCCCCcEEE-EeCCC-C
Q 002206 193 FRDVIDVPLVVR-RL---HK----SRKEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSGWKCL-VCGAS-D 257 (953)
Q Consensus 193 ~~~v~~vg~~~~-~~---~~----~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~----~~ll~~ll~~~~~~v-v~G~~-~ 257 (953)
+|++..|||... .. .. ..+++.+||+..+.+++|||||||... . .++...+...++.|+ +.+.. .
T Consensus 242 ~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~ 321 (475)
T PLN02167 242 YPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPA 321 (475)
T ss_pred CCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcc
Confidence 367889999532 11 11 125688899877677899999999854 2 233334444445443 33321 1
Q ss_pred ------CCCCCCe--------EECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHH
Q 002206 258 ------SQLPPNF--------IKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (953)
Q Consensus 258 ------~~lp~NV--------~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~ 319 (953)
..+|+|+ ++ +.|+| ++|+| +++||||||+||++|++++|||||++| .+.||+.||++
T Consensus 322 ~~~~~~~~lp~~~~er~~~rg~v---~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~ 396 (475)
T PLN02167 322 EYASPYEPLPEGFMDRVMGRGLV---CGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWP--MYAEQQLNAFT 396 (475)
T ss_pred cccchhhhCChHHHHHhccCeee---eccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecc--ccccchhhHHH
Confidence 1156653 33 35888 89988 889999999999999999999999999 78999999976
Q ss_pred -HHHcCcEEEEecC-------CCChhhHHHHHHHHHhC
Q 002206 320 -LEFYQGGVEMIRR-------DLLTGHWKPYLERAISL 349 (953)
Q Consensus 320 -l~~~G~g~~l~~~-------dl~~~~l~~al~~ll~~ 349 (953)
++..|+|+.+... .++.+.+.++|++++.+
T Consensus 397 ~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~ 434 (475)
T PLN02167 397 MVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDG 434 (475)
T ss_pred HHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcC
Confidence 6789999998642 46888999999999964
No 54
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=99.83 E-value=2.3e-18 Score=198.77 Aligned_cols=340 Identities=15% Similarity=0.112 Sum_probs=187.7
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHH-CCCcEEEEeCCCCccc--ccccC-CCceeeeeecccCCccccc-ccccC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLIS-AGHDVHVVTGAPDFVF--TSEIQ-SPRLFIRKVLLDCGAVQAD-ALTVD 87 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~-rGHeVt~is~~~~~~~--~~~i~-~~~~~~~~~~~~~g~~~~~-~~~~~ 87 (953)
|++.++++ ++.++.||+++++.||+.|+. +|+.|||++....... ..... .+.+.+... ..|+.... ....+
T Consensus 1 ~~~~hvv~-~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i--~dglp~g~~~~~~~ 77 (455)
T PLN02152 1 MAPPHFLL-VTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTF--SDGFDDGVISNTDD 77 (455)
T ss_pred CCCcEEEE-ecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccCCCCCCEEEEEc--CCCCCCcccccccc
Confidence 44445543 689999999999999999996 6999999977531110 00000 112333332 11221100 00001
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHHHH-cCC-CcEEEECC-CchHHHHHHHhCCcEEEEecCCh-h-HHHHHH------
Q 002206 88 RLASLEKYSETAVAPRKSILKDEVEWLN-SIK-ADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D-FIYAEY------ 156 (953)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~k-pDlVV~D~-~~~~~~~A~~~giP~I~is~~~~-~-~~~~~~------ 156 (953)
... .+..... .....+.+.++.+. ..+ +++||+|. .+|+..+|+.+|||.+.+...+- . ..+..+
T Consensus 78 ~~~---~~~~~~~-~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 153 (455)
T PLN02152 78 VQN---RLVNFER-NGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNNS 153 (455)
T ss_pred HHH---HHHHHHH-hccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCCC
Confidence 111 1111110 01111222222222 123 49999997 88999999999999988854431 1 111111
Q ss_pred ---Hhhhcc----c----h------HHHHHH---HHhhccc--cceEEecCCCC-------CCCCCCceeecCcccccC-
Q 002206 157 ---VMAAGH----H----H------RSIVWQ---IAEDYSH--CEFLIRLPGYC-------PMPAFRDVIDVPLVVRRL- 206 (953)
Q Consensus 157 ---~~~~~~----~----~------~~~~~~---l~~~~~~--~~~l~~~~~~~-------~~p~~~~v~~vg~~~~~~- 206 (953)
++.... . + ...... ....... ++.++--++.. .... ..+..|||.....
T Consensus 154 ~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~~v~~VGPL~~~~~ 232 (455)
T PLN02152 154 VFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-IEMVAVGPLLPAEI 232 (455)
T ss_pred eeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-CCEEEEcccCcccc
Confidence 010000 0 0 000111 1111111 12233222211 0111 2477899864210
Q ss_pred ---C---------CChHHHHHHhCCCCCCcEEEEEcCCCCc-h----HhHHHhhCCCCc--EEEEeCCC--------C--
Q 002206 207 ---H---------KSRKEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSGW--KCLVCGAS--------D-- 257 (953)
Q Consensus 207 ---~---------~~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~----~~ll~~ll~~~~--~~vv~G~~--------~-- 257 (953)
. ....++.+||+..+.+++|||||||+.. + .++...+...+. ++++-.+. .
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~ 312 (455)
T PLN02152 233 FTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEE 312 (455)
T ss_pred ccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccc
Confidence 0 0123688899877678999999999865 2 133333432222 22232210 0
Q ss_pred ------CC----CCCCeEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc
Q 002206 258 ------SQ----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY 323 (953)
Q Consensus 258 ------~~----lp~NV~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~ 323 (953)
+. .++|..+. +|+| ++|+| +.+||||||+||++|++++|||+|++| .+.||+.||+++++.
T Consensus 313 ~~~~~~~~f~e~~~~~g~v~---~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~~ 387 (455)
T PLN02152 313 TEIEKIAGFRHELEEVGMIV---SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFP--MWSDQPANAKLLEEI 387 (455)
T ss_pred cccccchhHHHhccCCeEEE---eeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEecc--ccccchHHHHHHHHH
Confidence 01 24555553 5788 89988 558999999999999999999999999 799999999999873
Q ss_pred -CcEEEEe--cCC-CChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 324 -QGGVEMI--RRD-LLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 324 -G~g~~l~--~~d-l~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
|.|+.+. ..+ ++.+++.++|++++.++ ....++.|..|.+.+
T Consensus 388 ~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~------~~~~r~~a~~~~~~~ 433 (455)
T PLN02152 388 WKTGVRVRENSEGLVERGEIRRCLEAVMEEK------SVELRESAEKWKRLA 433 (455)
T ss_pred hCceEEeecCcCCcCcHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHH
Confidence 5555553 333 47889999999999643 123455565555543
No 55
>PLN03015 UDP-glucosyl transferase
Probab=99.81 E-value=1.8e-17 Score=190.99 Aligned_cols=341 Identities=14% Similarity=0.125 Sum_probs=191.4
Q ss_pred ceEEEEEEecCCCcchHHHHHHHHHHHHHC-CCcEEEEeCCCCc-cc--ccccC----CCceeeeeecccCCccccccc-
Q 002206 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAPDF-VF--TSEIQ----SPRLFIRKVLLDCGAVQADAL- 84 (953)
Q Consensus 14 ~~l~il~~v~~~G~GH~~r~l~La~~L~~r-GHeVt~is~~~~~-~~--~~~i~----~~~~~~~~~~~~~g~~~~~~~- 84 (953)
.+.++++ ++.++.||+++++.||+.|+.+ |..|||++..... .. ...+. .+.+.+.... .+.. +.+
T Consensus 2 ~~pHvvl-~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp--~~~~--~~l~ 76 (470)
T PLN03015 2 DQPHALL-VASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIP--SVDV--DNLV 76 (470)
T ss_pred CCcEEEE-ECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECC--CCcc--ccCC
Confidence 3334433 6899999999999999999987 8999999654311 11 01011 0112222211 1100 011
Q ss_pred ccChHHHHHHHHHHhhccHHHHHHHHHHHHHcC--CCcEEEECC-CchHHHHHHHhCCc-EEEEecCC-hhH-HHHHH--
Q 002206 85 TVDRLASLEKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIR-SVCVTNFS-WDF-IYAEY-- 156 (953)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--kpDlVV~D~-~~~~~~~A~~~giP-~I~is~~~-~~~-~~~~~-- 156 (953)
..+. .....+... ...+.....++|++. +|++||+|. .+++..+|+.+||| .+.+...+ +.. .+..+
T Consensus 77 ~~~~-~~~~~~~~~----~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~ 151 (470)
T PLN03015 77 EPDA-TIFTKMVVK----MRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPV 151 (470)
T ss_pred CCCc-cHHHHHHHH----HHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhh
Confidence 0000 111111111 112223334445543 689999996 78899999999999 46553221 110 11000
Q ss_pred -----Hh---hhcc--------ch-----HH-H-------HHHHH---hhccccceEEecCCCC--------CCCC----
Q 002206 157 -----VM---AAGH--------HH-----RS-I-------VWQIA---EDYSHCEFLIRLPGYC--------PMPA---- 192 (953)
Q Consensus 157 -----~~---~~~~--------~~-----~~-~-------~~~l~---~~~~~~~~l~~~~~~~--------~~p~---- 192 (953)
.. ...+ .+ .. + ...+. .....++-++--++.. ....
T Consensus 152 ~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~ 231 (470)
T PLN03015 152 LDTVVEGEYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELN 231 (470)
T ss_pred hhcccccccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccc
Confidence 00 0000 00 00 0 01111 1122233333211110 0000
Q ss_pred ---CCceeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCch-----HhHHHhhCCCCcEE-EEeCC------
Q 002206 193 ---FRDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKC-LVCGA------ 255 (953)
Q Consensus 193 ---~~~v~~vg~~~~~--~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-----~~ll~~ll~~~~~~-vv~G~------ 255 (953)
.+.+..|||.... .....+++.+||+..+.+++|||||||...- .++...+...+..| .+...
T Consensus 232 ~~~~~~v~~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~ 311 (470)
T PLN03015 232 RVMKVPVYPIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLG 311 (470)
T ss_pred cccCCceEEecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccc
Confidence 1458889996532 1122346889998777789999999998762 12333343333322 22221
Q ss_pred ------C-CC-CCCCC---------eEECCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchH
Q 002206 256 ------S-DS-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEP 314 (953)
Q Consensus 256 ------~-~~-~lp~N---------V~v~~~~~~~p--dlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~ 314 (953)
. .. .+|+| +.+ ..|+| ++|+| +.+||||||+||++|++++|||||++| .+.||+
T Consensus 312 ~~~~~~~~~~~~lp~~f~er~~~rGl~v---~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P--~~~DQ~ 386 (470)
T PLN03015 312 ASSSDDDQVSASLPEGFLDRTRGVGLVV---TQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP--LYAEQW 386 (470)
T ss_pred cccccccchhhcCChHHHHhhccCceEE---EecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc--cccchH
Confidence 0 11 26666 333 35888 89988 788999999999999999999999999 799999
Q ss_pred HHHHHH-HHcCcEEEEe----cCCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 315 FLRNML-EFYQGGVEMI----RRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 315 ~NA~~l-~~~G~g~~l~----~~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
.||+++ +..|+|+.+. ...++.+.+..+|++++.... ......++-|..|.+.+.
T Consensus 387 ~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~---eeg~~~R~ra~~lk~~a~ 446 (470)
T PLN03015 387 MNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEED---EEGQKIRAKAEEVRVSSE 446 (470)
T ss_pred HHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCc---ccHHHHHHHHHHHHHHHH
Confidence 999999 6789999995 234788899999999984200 022345556666666543
No 56
>PLN02534 UDP-glycosyltransferase
Probab=99.80 E-value=3.8e-17 Score=190.14 Aligned_cols=344 Identities=13% Similarity=0.090 Sum_probs=188.5
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcc-cccccC---C--Cceeeeeeccc---CCcccc-ccc-
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV-FTSEIQ---S--PRLFIRKVLLD---CGAVQA-DAL- 84 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~-~~~~i~---~--~~~~~~~~~~~---~g~~~~-~~~- 84 (953)
.++++ ++.++.||+++++.||+.|+.+|+.|||+++..... ...... . ..+.+...... .|+... ...
T Consensus 9 ~Hvv~-vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~ 87 (491)
T PLN02534 9 LHFVL-IPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLD 87 (491)
T ss_pred CEEEE-ECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccc
Confidence 34433 689999999999999999999999999997753211 111010 0 01333322110 122100 000
Q ss_pred ccChHHHHHHHHHHhhccHHHHHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHhCCcEEEEecCC---hhHH---HHH
Q 002206 85 TVDRLASLEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFS---WDFI---YAE 155 (953)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~--~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~---~~~~---~~~ 155 (953)
..........+... ...+.....++|.+ .+|++||+|. ..|+..+|+.+|||.+.+...+ .... +..
T Consensus 88 ~~~~~~~~~~~~~~----~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~ 163 (491)
T PLN02534 88 TLPSRDLLRKFYDA----VDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLH 163 (491)
T ss_pred cCCcHHHHHHHHHH----HHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHh
Confidence 00110111111111 11222333445554 3579999997 7899999999999998875332 1110 000
Q ss_pred H-------------Hhhhcc----c---hHH----------HHHHHHhhccccceEEecCCCCC--------CCCC-Cce
Q 002206 156 Y-------------VMAAGH----H---HRS----------IVWQIAEDYSHCEFLIRLPGYCP--------MPAF-RDV 196 (953)
Q Consensus 156 ~-------------~~~~~~----~---~~~----------~~~~l~~~~~~~~~l~~~~~~~~--------~p~~-~~v 196 (953)
. ++.... . +.. +...+......++.++.-++... ...+ +++
T Consensus 164 ~~~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v 243 (491)
T PLN02534 164 NAHLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKV 243 (491)
T ss_pred cccccCCCCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcE
Confidence 0 000000 0 000 00001011111222222111100 0111 467
Q ss_pred eecCccccc-C-------CC-----ChHHHHHHhCCCCCCcEEEEEcCCCCc--hHh---HHHhhCCCCcE-EEEeCCC-
Q 002206 197 IDVPLVVRR-L-------HK-----SRKEVRKELGIEDDVKLLILNFGGQPA--GWK---LKEEYLPSGWK-CLVCGAS- 256 (953)
Q Consensus 197 ~~vg~~~~~-~-------~~-----~~~e~~~~l~~~~~~~vVlvs~Gs~~~--~~~---ll~~ll~~~~~-~vv~G~~- 256 (953)
..|||.... . .. ..+++.+||+..+.+++|||||||... +.+ +...+...+.. +.++...
T Consensus 244 ~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~ 323 (491)
T PLN02534 244 WCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGE 323 (491)
T ss_pred EEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 889985321 0 00 123577899877778999999999865 222 33334322332 2233211
Q ss_pred C-----C-CC---------CCCeEECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHH
Q 002206 257 D-----S-QL---------PPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLR 317 (953)
Q Consensus 257 ~-----~-~l---------p~NV~v~~~~~~~p--dlLa~aD--lfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA 317 (953)
. . .+ +.|+.+ ..|+| ++|+|.+ +||||||+||++||+++|||+|++| .+.||+.|+
T Consensus 324 ~~~~~~~~~~p~gf~~~~~~~g~~v---~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P--~~~dq~~na 398 (491)
T PLN02534 324 KHSELEEWLVKENFEERIKGRGLLI---KGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWP--LFAEQFLNE 398 (491)
T ss_pred cccchhhhcCchhhHHhhccCCeec---cCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEecc--ccccHHHHH
Confidence 0 0 02 344444 35777 8999855 5999999999999999999999999 789999999
Q ss_pred HHHH-HcCcEEEEec---------C----CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 318 NMLE-FYQGGVEMIR---------R----DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 318 ~~l~-~~G~g~~l~~---------~----dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
++++ ..|+|+.+.. + -++.+.+..+|++++.... ......++-|..|.+.++
T Consensus 399 ~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~---eeg~~~R~rA~elk~~a~ 464 (491)
T PLN02534 399 KLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGG---EEGERRRRRAQELGVMAR 464 (491)
T ss_pred HHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhcccc---ccHHHHHHHHHHHHHHHH
Confidence 9996 5688887631 1 2678899999999985210 022345556666666543
No 57
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.80 E-value=2e-17 Score=188.31 Aligned_cols=324 Identities=18% Similarity=0.066 Sum_probs=191.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (953)
|+|++...+.| ||..++..++++|.++||+|++++...... ...++...+.+..... .+.. .......+...
T Consensus 2 ~~i~i~~~g~g-G~~~~~~~la~~L~~~g~ev~vv~~~~~~~-~~~~~~~g~~~~~~~~-~~~~-----~~~~~~~l~~~ 73 (357)
T PRK00726 2 KKILLAGGGTG-GHVFPALALAEELKKRGWEVLYLGTARGME-ARLVPKAGIEFHFIPS-GGLR-----RKGSLANLKAP 73 (357)
T ss_pred cEEEEEcCcch-HhhhHHHHHHHHHHhCCCEEEEEECCCchh-hhccccCCCcEEEEec-cCcC-----CCChHHHHHHH
Confidence 55655656676 999999999999999999999998743211 1111111222222100 0100 00111111111
Q ss_pred HHHhhccHHHHHHHHHHHHHcCCCcEEEECC---CchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHH
Q 002206 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (953)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (953)
..+ ...+....+.+++.+||+|++.. ...+..++...++|+|.+....+......+.
T Consensus 74 ~~~-----~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~r~~--------------- 133 (357)
T PRK00726 74 FKL-----LKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAVPGLANKLL--------------- 133 (357)
T ss_pred HHH-----HHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCCccHHHHHH---------------
Confidence 111 12233445678889999999985 2334455677789998764322211111100
Q ss_pred hhccccceEEecCCCC-CCCCCCceeecCc--ccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHH-Hhh--C
Q 002206 173 EDYSHCEFLIRLPGYC-PMPAFRDVIDVPL--VVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-EEY--L 244 (953)
Q Consensus 173 ~~~~~~~~l~~~~~~~-~~p~~~~v~~vg~--~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll-~~l--l 244 (953)
+..++.++...... ......++..+|. ....... ...+..++++++.++|++..|+.+.. ..++ ..+ +
T Consensus 134 --~~~~d~ii~~~~~~~~~~~~~~i~vi~n~v~~~~~~~--~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 134 --ARFAKKVATAFPGAFPEFFKPKAVVTGNPVREEILAL--AAPPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred --HHHhchheECchhhhhccCCCCEEEECCCCChHhhcc--cchhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 01111111110000 0001123444443 2211111 11223445555566777766654432 2233 221 1
Q ss_pred CCC-cEEEEeCCCCCC-------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCchH
Q 002206 245 PSG-WKCLVCGASDSQ-------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEEP 314 (953)
Q Consensus 245 ~~~-~~~vv~G~~~~~-------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~--~~DQ~ 314 (953)
... ..++++|..... ++-+|.+.+|.++++++|+.||++|+|+|.++++||+++|+|+|++|.+. ..||.
T Consensus 210 ~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~ 289 (357)
T PRK00726 210 PEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQT 289 (357)
T ss_pred hhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHH
Confidence 222 345566765421 22247888888788899999999999999999999999999999999642 46899
Q ss_pred HHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 002206 315 FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (953)
Q Consensus 315 ~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l 371 (953)
.|++.+.+.|.|..+...+++++.+.++|+++++++..+. ....++.++++.|.+.+
T Consensus 290 ~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 290 ANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 9999999999999999888888999999999998764321 57788888888888764
No 58
>PRK01123 shikimate kinase; Provisional
Probab=99.80 E-value=7.9e-18 Score=184.16 Aligned_cols=122 Identities=16% Similarity=0.122 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCC-CC
Q 002206 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGA-PC 689 (953)
Q Consensus 611 ~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~-~s 689 (953)
+++..++..+++.++.+ .|++|++.|+||.++|||||||++||++.|++.+++.++++++++++|..+|+..++. .+
T Consensus 57 ~~v~~~~~~~~~~~~~~--~~~~i~i~s~IP~~~GLGSSaA~~va~~~a~~~~~~~~l~~~el~~la~~~e~~~~~~~~g 134 (282)
T PRK01123 57 RLIERCVELVLERFGID--YGATVRTKSEIPLASGLKSSSAAANATVLATLDALGEDLDDLDILRLGVKASRDAGVTVTG 134 (282)
T ss_pred hHHHHHHHHHHHHhCCC--CCEEEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccccccC
Confidence 67777777777777754 5999999999999999999999999999999999999999999999999999987764 35
Q ss_pred CccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccC
Q 002206 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 690 G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~ 739 (953)
+.+|++++++||. ++.+........+ ++.++.+++++++.+.+|.
T Consensus 135 ~~~d~~~~~~GG~---~~~~~~~~~~~~~--~~~~~~~vv~~p~~~~~T~ 179 (282)
T PRK01123 135 AFDDACASYFGGV---TVTDNREMKLLKR--DEVELDVLVLIPPEGAFSA 179 (282)
T ss_pred chhHHHHHHhCCE---EEEcCCCceEEEE--ecCCcEEEEEECCCCcchh
Confidence 5578889999994 4444322211122 3345889999888666553
No 59
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.79 E-value=4.8e-17 Score=172.44 Aligned_cols=334 Identities=20% Similarity=0.219 Sum_probs=201.4
Q ss_pred ceEEEEEEe-cCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCCC---cccccccCCCceeeeee-cccCCccccccccc
Q 002206 14 KHLVFAYYV-TGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPD---FVFTSEIQSPRLFIRKV-LLDCGAVQADALTV 86 (953)
Q Consensus 14 ~~l~il~~v-~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~~---~~~~~~i~~~~~~~~~~-~~~~g~~~~~~~~~ 86 (953)
+.++|+||+ -..|.||..|+..+|++|++. |.+|+++++.+. |.....+ ..+.++++ ..+.|.........
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gV--d~V~LPsl~k~~~G~~~~~d~~~ 85 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGV--DFVKLPSLIKGDNGEYGLVDLDG 85 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccC--ceEecCceEecCCCceeeeecCC
Confidence 345777777 678999999999999999998 999999998752 2221211 11222221 01223221000112
Q ss_pred ChHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHH------HHHH--hC-CcEEEEecCChhHHHHHHH
Q 002206 87 DRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACR------AAAD--AG-IRSVCVTNFSWDFIYAEYV 157 (953)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~------~A~~--~g-iP~I~is~~~~~~~~~~~~ 157 (953)
+. .....+ +..++ ...++.+|||++|+|..+.++. ++.. .+ -|+..+++.- +.... .
T Consensus 86 ~l----~e~~~~----Rs~li---l~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~--D~p~~-~ 151 (400)
T COG4671 86 DL----EETKKL----RSQLI---LSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIR--DIPQE-L 151 (400)
T ss_pred CH----HHHHHH----HHHHH---HHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhh--hchhh-h
Confidence 21 111111 12222 4556789999999998665542 2222 13 2234443321 10000 0
Q ss_pred hhhccch--HHHHHHHHhhcc------ccceEEecCCCCCC-CC-CCceeecCccccc-C-CCChHHHHHHhCCCCCCcE
Q 002206 158 MAAGHHH--RSIVWQIAEDYS------HCEFLIRLPGYCPM-PA-FRDVIDVPLVVRR-L-HKSRKEVRKELGIEDDVKL 225 (953)
Q Consensus 158 ~~~~~~~--~~~~~~l~~~~~------~~~~l~~~~~~~~~-p~-~~~v~~vg~~~~~-~-~~~~~e~~~~l~~~~~~~v 225 (953)
. ..+ ......+..+|. ..+ ++...-..+. +. ..+++++|...+. + ..+|..+ .++...
T Consensus 152 ~---~~w~~~~~~~~I~r~yD~V~v~GdP~-f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~~------~pE~~~ 221 (400)
T COG4671 152 E---ADWRRAETVRLINRFYDLVLVYGDPD-FYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPHE------APEGFD 221 (400)
T ss_pred c---cchhhhHHHHHHHHhheEEEEecCcc-ccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCcC------CCccce
Confidence 0 001 011111222221 111 1100000111 11 1356777775221 1 1111111 135567
Q ss_pred EEEEcCCCCchHhHHHh-----hCCCCc---EEEEeCCCCCC---------CC--CCeEECCCCCCHHHHHhhcCEEEec
Q 002206 226 LILNFGGQPAGWKLKEE-----YLPSGW---KCLVCGASDSQ---------LP--PNFIKLPKDAYTPDFMAASDCMLGK 286 (953)
Q Consensus 226 Vlvs~Gs~~~~~~ll~~-----ll~~~~---~~vv~G~~~~~---------lp--~NV~v~~~~~~~pdlLa~aDlfIth 286 (953)
|+||.||-..+.++... ...+++ -++++|+.-|. -+ +++.++.|...+-++|+.|+.+|+.
T Consensus 222 Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~vVSm 301 (400)
T COG4671 222 ILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARLVVSM 301 (400)
T ss_pred EEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhheeeec
Confidence 99999987776555542 111222 45677987542 24 7899999988888999999999999
Q ss_pred CChhHHHHHHHcCCcEEEEeCC-CCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCc--cCCCCHHHHH
Q 002206 287 IGYGTVSEALAYKLPFVFVRRD-YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY--EGGINGGEVA 363 (953)
Q Consensus 287 gG~~Tv~Eal~~GvP~l~iP~~-~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~--~~~~~g~~~~ 363 (953)
|||||++|.+.+|||.|+||+. ...||...|+++++.|..-++.++++++..+.++|...++.|+.. .-..+|+..+
T Consensus 302 ~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~~~~~~L~L~G~~~~ 381 (400)
T COG4671 302 GGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPSPSKPHLDLEGLEHI 381 (400)
T ss_pred ccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCCCCccccCchhhHhH
Confidence 9999999999999999999975 345899999999999999999999999999999999998754221 2578999999
Q ss_pred HHHHHHHHcc
Q 002206 364 AHILQETAIG 373 (953)
Q Consensus 364 A~~i~~~l~~ 373 (953)
+.++.+.+..
T Consensus 382 a~~l~e~L~~ 391 (400)
T COG4671 382 ARILAELLST 391 (400)
T ss_pred HHHHHHHhhh
Confidence 9999887654
No 60
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.76 E-value=2.4e-16 Score=178.63 Aligned_cols=302 Identities=18% Similarity=0.097 Sum_probs=176.1
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHH
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (953)
|++...+. .||..++..++++|.++||+|++++...... ...+....+.+..... .+.. .......+..+..
T Consensus 2 ~~~~~~~~-gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~ 73 (350)
T cd03785 2 ILIAGGGT-GGHIFPALALAEELRERGAEVLFLGTKRGLE-ARLVPKAGIPLHTIPV-GGLR-----RKGSLKKLKAPFK 73 (350)
T ss_pred EEEEecCc-hhhhhHHHHHHHHHHhCCCEEEEEECCCcch-hhcccccCCceEEEEe-cCcC-----CCChHHHHHHHHH
Confidence 44444444 5999999999999999999999997743211 1111101122221100 0000 0001111111111
Q ss_pred HhhccHHHHHHHHHHHHHcCCCcEEEECC---CchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhh
Q 002206 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAED 174 (953)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (953)
+ ........+++++.+||+|+++. ...+..++...++|++......|..... . ..
T Consensus 74 ~-----~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~---------------~--~~ 131 (350)
T cd03785 74 L-----LKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGLAN---------------R--LL 131 (350)
T ss_pred H-----HHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccHHH---------------H--HH
Confidence 1 11223345677889999999875 3334566788899998753322211110 0 01
Q ss_pred ccccceEEecCCCCC--CCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHH-H---hhCCC
Q 002206 175 YSHCEFLIRLPGYCP--MPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYLPS 246 (953)
Q Consensus 175 ~~~~~~l~~~~~~~~--~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll-~---~ll~~ 246 (953)
+..++.++..+.... .+. .++..+|.-+......+...++.++.++++++|++..|+.... ..++ . .+...
T Consensus 132 ~~~~~~vi~~s~~~~~~~~~-~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~ 210 (350)
T cd03785 132 ARFADRVALSFPETAKYFPK-DKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRK 210 (350)
T ss_pred HHhhCEEEEcchhhhhcCCC-CcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhcc
Confidence 111233332211100 011 2333344322211000111155667766666777776665542 2233 2 23223
Q ss_pred CcE-EEEeCCCCCC--------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCchHH
Q 002206 247 GWK-CLVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEEPF 315 (953)
Q Consensus 247 ~~~-~vv~G~~~~~--------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~--~~DQ~~ 315 (953)
++. ++++|....+ +.+|+++.++...++++|+.||++|+++|.+|++||+++|+|+|++|.+. ..+|..
T Consensus 211 ~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~ 290 (350)
T cd03785 211 RLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTA 290 (350)
T ss_pred CeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHH
Confidence 444 3466765311 24689999988788899999999999999999999999999999998654 578889
Q ss_pred HHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 316 LRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 316 NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
|++.+.+.|.|+.++..+.+++.+.++|.++++++
T Consensus 291 ~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 291 NARALVKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred hHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 99999999999999877566789999999999765
No 61
>TIGR00191 thrB homoserine kinase. P.aeruginosa homoserine kinase seems not to be homologous (see PROSITE:PDOC0054)
Probab=99.74 E-value=2.9e-17 Score=181.76 Aligned_cols=117 Identities=22% Similarity=0.339 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
.|.+..++..+++..|.+. .|++|.|.++||+++|||||||.++|++.|++.+++.++++++++++|.++|.+
T Consensus 60 ~Nlv~~a~~~~~~~~g~~~-~g~~i~i~~~IP~~~GLGSSsa~~vA~l~a~~~l~~~~l~~~el~~~a~~~E~h------ 132 (302)
T TIGR00191 60 DNLIYQVAKRFLDQLGIRM-PPVKVTLEKNIPLGRGLGSSAAAIVAALAAANELCGLPLSKERLLDYASELEGH------ 132 (302)
T ss_pred cccHHHHHHHHHHHcCCCC-CCEEEEEEcCCCCcCCCChHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHhcCC------
Confidence 3566677777777777643 589999999999999999999999999999999999999999999999999963
Q ss_pred Cccch-hhhhccCcceEEEEeecCccceeeeecC--CCeEEEEEeCCCccccC
Q 002206 690 GVMDQ-MASACGEANKLLAMVCQPAELLGVVEIP--SHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 690 G~~D~-~~~~~Gg~~~~~~~~~~~~~~~~~~~~p--~~~~~vl~dsgv~~~~~ 739 (953)
.|+ .++++||. ++...+.... ..++++ +++.+++++++...+|.
T Consensus 133 --~Dnv~~~l~GG~---~~~~~~~~~~-~~~~~~~~~~~~~vl~~p~~~~sT~ 179 (302)
T TIGR00191 133 --PDNVAPALLGGF---QLAFVEDDKL-EVLKIPIFSKLDWVLAIPNIEVSTA 179 (302)
T ss_pred --cccHHHHhccCE---EEEEEcCCce-EEEEeCCCCCEEEEEEECCCcccHH
Confidence 475 46889994 3333333222 444444 67999999998776653
No 62
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.74 E-value=1.3e-16 Score=176.48 Aligned_cols=163 Identities=15% Similarity=0.155 Sum_probs=112.6
Q ss_pred EEEcCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCC
Q 002206 499 VARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (953)
Q Consensus 499 ~~~APGrv~l~----GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 573 (953)
...||+||||+ |..-| ||.-..+-++|+++-.+.+++.+. + .+.+...
T Consensus 2 ~~~a~aKiNl~L~i~~kr~dgyH~l~s~~~ai~l~d~v~i~~~~~--~-------------------~i~~~~~------ 54 (300)
T PRK03188 2 TVRAPAKVNLHLGVGPLRDDGYHELATVFQAVSLYDEVTVTAADV--L-------------------SVEVSGE------ 54 (300)
T ss_pred eEeecceEEEeeccCCcCCCCccchHhhheehhhccEEEEEECCC--c-------------------EEEEecC------
Confidence 35899999996 55555 777788888999999999887532 1 1111100
Q ss_pred CCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHH
Q 002206 574 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 653 (953)
Q Consensus 574 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~ 653 (953)
..+.+ | .+ -.|.+..++..++++++.. ++++|.|.++||+++|||||||.+
T Consensus 55 -------~~~~~-----~-----------~~----~~nl~~~~~~~~~~~~~~~--~~~~I~i~s~IP~~~GLGSSSA~a 105 (300)
T PRK03188 55 -------GADQV-----P-----------TD----ESNLAWRAAELLAEHVGRA--PDVHLHIDKGIPVAGGMAGGSADA 105 (300)
T ss_pred -------CccCC-----C-----------CC----CccHHHHHHHHHHHHhCCC--CCeEEEEEcCCcccCcchHHHHHH
Confidence 00000 0 00 1345566666667777753 689999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEe
Q 002206 654 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (953)
Q Consensus 654 va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~d 731 (953)
+|++.|++.++|.++++++++++|.++| .|..++++|| +++...+. +...++..+.++.++++.
T Consensus 106 ~A~l~al~~~~g~~ls~~el~~~a~~ig----------~dv~~~~~GG---~~~~~~~g-~~~~~~~~~~~~~~~lv~ 169 (300)
T PRK03188 106 AAALVACDALWGLGLSRDELLELAAELG----------SDVPFALLGG---TALGTGRG-EQLAPVLARGTFHWVLAF 169 (300)
T ss_pred HHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcchhhcCC---eEEEEecC-CEEEECCCCCCcEEEEEe
Confidence 9999999999999999999999998863 3777889999 34443332 222344444455555543
No 63
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism]
Probab=99.73 E-value=2.7e-16 Score=168.11 Aligned_cols=202 Identities=22% Similarity=0.317 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCc
Q 002206 612 YVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGV 691 (953)
Q Consensus 612 y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~ 691 (953)
.+..++..+++++|.+. +++|.++++||.++|||||||.+||.+.|++++++.+++++++.+++-..|.|.
T Consensus 60 ~~~~~~~~~~~~~~~~~--~~~i~i~k~IP~~rGLGSSaAsiVAal~aan~l~~~~L~~~~ll~~a~~~EgHp------- 130 (299)
T COG0083 60 LVYQAALKFLEALGIEA--GVKIRIEKGIPLGRGLGSSAASIVAALAAANELAGLPLSKEELLQLALEIEGHP------- 130 (299)
T ss_pred eHHHHHHHHHHHhCCCc--cEEEEEEcCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCC-------
Confidence 55566677788888764 499999999999999999999999999999999999999999999999999853
Q ss_pred cchh-hhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCC
Q 002206 692 MDQM-ASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLP 770 (953)
Q Consensus 692 ~D~~-~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~ 770 (953)
||. +|++||. .+......-....+++|.+++++++-.+.+-+|.. |
T Consensus 131 -DNVapa~lGG~---~l~~~~~~~~~~~v~~~~~~~~v~~iP~~e~sT~~--------------------a--------- 177 (299)
T COG0083 131 -DNVAPAVLGGL---VLVEEESGIISVKVPFPSDLKLVVVIPNFEVSTAE--------------------A--------- 177 (299)
T ss_pred -chHHHHhhCCE---EEEeecCCceEEEccCCcceEEEEEeCCccccHHH--------------------H---------
Confidence 666 5999993 33332221122456677899999986654444421 1
Q ss_pred CCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccc
Q 002206 771 SSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCH 850 (953)
Q Consensus 771 ~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h 850 (953)
| ..||+.++ ...
T Consensus 178 ---------------------------R------------~vLP~~~~-----------------------------~~d 189 (299)
T COG0083 178 ---------------------------R------------KVLPKSYS-----------------------------RKD 189 (299)
T ss_pred ---------------------------H------------HhccccCC-----------------------------HHH
Confidence 0 23454331 223
Q ss_pred ccchhhhHHHHHHHHHccCChHHHHHHHHHHHH-hhhhhhhcCCCCchHHHHHHHHHHhhhcccccCCCCCccccccccc
Q 002206 851 PIYENFRVKAFKALLTAAASDDQLTSLGELLYQ-CHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGG 929 (953)
Q Consensus 851 ~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~-sh~sl~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGa 929 (953)
++....|+.-+..+|.++ |.+.+...|.+ =|+-+|.- --|+++++.+.+.+ .|++|+-++||
T Consensus 190 aV~n~s~~a~lv~al~~~----~~~l~~~~~~D~ihepyR~~--L~P~~~~v~~~a~~-----------~gA~g~~lSGA 252 (299)
T COG0083 190 AVFNLSRAALLVAALLEG----DPELLRAMMKDVIHEPYRAK--LVPGYAEVREAALE-----------AGALGATLSGA 252 (299)
T ss_pred HHHHHHHHHHHHHHHHcC----CHHHHHHHhccccchhhhhh--hCccHHHHHHHHhh-----------CCceEEEEecC
Confidence 344456788889999886 76666666665 89999992 26899999999987 79999999999
Q ss_pred ccCceEEEeccCC
Q 002206 930 GSGGTICVIGRNS 942 (953)
Q Consensus 930 G~GG~v~~l~~~~ 942 (953)
| -+++++.++.
T Consensus 253 G--PTi~al~~~~ 263 (299)
T COG0083 253 G--PTVFALADES 263 (299)
T ss_pred C--CeEEEEeccc
Confidence 8 8999997764
No 64
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.72 E-value=4.6e-16 Score=170.18 Aligned_cols=249 Identities=17% Similarity=0.193 Sum_probs=141.9
Q ss_pred cCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhcc
Q 002206 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (953)
Q Consensus 23 ~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (953)
+.-|.||++||++||++|+++||+|+|++..........+...++.+.. +. +. .+ +
T Consensus 10 ~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~-------~~-~~--~~----------~---- 65 (279)
T TIGR03590 10 SEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYE-------LP-DE--SS----------R---- 65 (279)
T ss_pred ccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEE-------ec-CC--Cc----------h----
Confidence 5668999999999999999999999999886432222222111111111 00 00 00 0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEECCCchHH---HHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhhccccc
Q 002206 103 RKSILKDEVEWLNSIKADLVVSDVVPVAC---RAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCE 179 (953)
Q Consensus 103 ~~~~~~~~~~~L~~~kpDlVV~D~~~~~~---~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (953)
..-..+..+.|++.+||+||.|++.... ...+..+.++++++++.-...+.+++-... . ..+. ..|..
T Consensus 66 -~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~~~~~~D~vin~~--~--~~~~--~~y~~-- 136 (279)
T TIGR03590 66 -YDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEFGRKILVIDDLADRPHDCDLLLDQN--L--GADA--SDYQG-- 136 (279)
T ss_pred -hhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCCCCcCCCEEEeCC--C--CcCH--hHhcc--
Confidence 0011223566788899999999843222 122334678888888752211111110000 0 0000 00100
Q ss_pred eEEecCCCCCCCCCCceeecCcccccCCCChHHHHHHhC--CC-CCCcEEEEEcCCCCch---HhHHHhhC--CCCc-EE
Q 002206 180 FLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELG--IE-DDVKLLILNFGGQPAG---WKLKEEYL--PSGW-KC 250 (953)
Q Consensus 180 ~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~--~~-~~~~vVlvs~Gs~~~~---~~ll~~ll--~~~~-~~ 250 (953)
..|. ......|+.. .+.+++..+... .. .+.+.|++++||.+.. ..++..+. ..++ ..
T Consensus 137 ---------~~~~-~~~~l~G~~Y---~~lr~eF~~~~~~~~~~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~~i~ 203 (279)
T TIGR03590 137 ---------LVPA-NCRLLLGPSY---ALLREEFYQLATANKRRKPLRRVLVSFGGADPDNLTLKLLSALAESQINISIT 203 (279)
T ss_pred ---------cCcC-CCeEEecchH---HhhhHHHHHhhHhhhcccccCeEEEEeCCcCCcCHHHHHHHHHhccccCceEE
Confidence 0010 0112233311 112222221110 00 1246799999987763 24444442 2344 44
Q ss_pred EEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH
Q 002206 251 LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (953)
Q Consensus 251 vv~G~~~~~---------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l 320 (953)
+++|+..+. ..+|+++.+|++.|+++|+.||++||++| +|++|++++|+|+|++|.. .+|..||+.+
T Consensus 204 vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~--~nQ~~~a~~~ 279 (279)
T TIGR03590 204 LVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICLA--ENQQSNSQQL 279 (279)
T ss_pred EEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEec--ccHHHHhhhC
Confidence 577876532 24689999998889999999999999999 9999999999999999954 5788998763
No 65
>PRK01212 homoserine kinase; Provisional
Probab=99.71 E-value=2.1e-16 Score=175.17 Aligned_cols=203 Identities=20% Similarity=0.257 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCC
Q 002206 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (953)
Q Consensus 611 ~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG 690 (953)
|.+..++..+.+..+.. .|++|.|.++||.++|||||||.++|++.|++.+++.++++++|+++|..+|.+.
T Consensus 63 Nli~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSa~aaA~l~al~~l~~~~l~~~eL~~~a~~~e~~~------ 134 (301)
T PRK01212 63 NLVYQAALKFLEKLGKP--PGLRIELEKNIPLGRGLGSSAASIVAGLVAANELAGLPLSKEELLQLATEGEGHP------ 134 (301)
T ss_pred ccHHHHHHHHHHHcCCC--CCeEEEEEeCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCH------
Confidence 55666666666667754 6899999999999999999999999999999999999999999999999999731
Q ss_pred ccchhhhhccCcceEEEEe-ecCccceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccC
Q 002206 691 VMDQMASACGEANKLLAMV-CQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSL 769 (953)
Q Consensus 691 ~~D~~~~~~Gg~~~~~~~~-~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~ 769 (953)
.|...+++||. .+.. ..+ ...++++.|+++.+++++++..-+|.. +.+
T Consensus 135 -ddv~~~l~GG~---~~~~~g~g-~~~~~~~~~~~~~~vlv~p~~~~sT~~--------------------a~~------ 183 (301)
T PRK01212 135 -DNVAPALLGGL---VLALEENG-VISVKIPVFDDLKWVVAIPNIELSTAE--------------------ARA------ 183 (301)
T ss_pred -HHHHHHHhCCE---EEEEECCc-eEEEEecCCCCeEEEEEECCCcCCHHH--------------------HHH------
Confidence 13346889994 3332 333 223566667788899998876554421 000
Q ss_pred CCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccc
Q 002206 770 PSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVC 849 (953)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 849 (953)
.+|+.. ...
T Consensus 184 ------------------------------------------~l~~~~-----------------------------~~~ 192 (301)
T PRK01212 184 ------------------------------------------VLPKQY-----------------------------SLK 192 (301)
T ss_pred ------------------------------------------hCcCcC-----------------------------CHH
Confidence 011000 000
Q ss_pred cccchhhhHHHHHHHHHccCChHHHHHHHHHHHH-hhhhhhhcCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccc
Q 002206 850 HPIYENFRVKAFKALLTAAASDDQLTSLGELLYQ-CHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITG 928 (953)
Q Consensus 850 h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~-sh~sl~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltG 928 (953)
+.+.+..|+..+..+|.++ |++.+|++|+. -|+.++.. .+|+++++++.+++ .|++|++|||
T Consensus 193 ~~~~~~~~~~~l~~al~~~----d~~~~~~~~~~~~~~~~~~~--~~p~~~~i~~~~~~-----------~Ga~g~~~SG 255 (301)
T PRK01212 193 DAVFNSSRAALLVAALYTG----DYELAGRAMKDVLHEPYRAK--LIPGFAEVRQAALE-----------AGALGAGISG 255 (301)
T ss_pred HHHHHHHHHHHHHHHHhhC----CHHHHHHHhchhheHHhHHh--hCCCHHHHHHHHHH-----------CCCeEEEEEc
Confidence 1122234566777888775 89999999843 46666442 36999999999987 6889999999
Q ss_pred cccCceEEEeccCC
Q 002206 929 GGSGGTICVIGRNS 942 (953)
Q Consensus 929 aG~GG~v~~l~~~~ 942 (953)
+| +|+++|.+++
T Consensus 256 sG--ptv~~l~~~~ 267 (301)
T PRK01212 256 AG--PTVFALCDKE 267 (301)
T ss_pred hh--hheeEEeccc
Confidence 76 8888876553
No 66
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.71 E-value=3.1e-16 Score=171.31 Aligned_cols=171 Identities=13% Similarity=0.147 Sum_probs=119.7
Q ss_pred EEEEcCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l~----GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.++||+||||+ |-..| |+.-..+-..|+++-.+.+.+.+... +.+...
T Consensus 4 ~~~~apaKiNl~L~i~~~r~dgyH~l~s~~~~i~l~d~v~v~~~~~~~---------------------~~i~~~----- 57 (280)
T PRK14614 4 LTLKAPAKVNYRLDVLRRRPDGYHDLRMIMQRVDLCDEIEIALSDGPG---------------------IRVTCG----- 57 (280)
T ss_pred eEEeecceEEeeeccCCCCCCCcChhheEeEECCCCeEEEEEECCCCC---------------------EEEEeC-----
Confidence 456899999984 55555 66666666788888888777653211 122100
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
. ..+ +.. -.|.+..++..+++..+.. .|++|.|.++||+++|||||||.
T Consensus 58 ~---------~~~-------------------p~~-~~nl~~~a~~~~~~~~~~~--~~~~i~i~~~IP~~~GLGsssa~ 106 (280)
T PRK14614 58 R---------EGV-------------------PDG-PGNIAWRAADALLDLSGRE--VGIDISITKNIPVAAGLGGGSSD 106 (280)
T ss_pred C---------CCC-------------------CCC-CCcHHHHHHHHHHHHhCCC--CceEEEEEecCCCcCccHHHHHH
Confidence 0 000 000 1355656666677777753 68999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeC
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 732 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~ds 732 (953)
++|++.+++.+++.+++++++.++|..+ | +|...+++||. .+...+. +..+.++.+++..++++++
T Consensus 107 ~~a~~~al~~~~~~~l~~~~l~~~a~~~---------G-~Dv~~~l~gg~---~~~~g~g-e~~~~l~~~~~~~ivl~~p 172 (280)
T PRK14614 107 AATVLMGVNELLGLGLSDERLMEIGVKL---------G-ADVPFFIFKKT---ALAEGIG-DKLTAVEGVPPLWVVLVNP 172 (280)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHh---------C-CCcceeeeCCc---EEEEEcC-ceeEECCCCCCcEEEEECC
Confidence 9999999999999999999999998754 3 38777889884 3332222 2224555556788999999
Q ss_pred CCccccC
Q 002206 733 GIRHSVG 739 (953)
Q Consensus 733 gv~~~~~ 739 (953)
++..+|.
T Consensus 173 ~~~~sT~ 179 (280)
T PRK14614 173 GLHVSTA 179 (280)
T ss_pred CCCCCHH
Confidence 9888775
No 67
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.70 E-value=6e-16 Score=177.70 Aligned_cols=324 Identities=15% Similarity=0.066 Sum_probs=182.7
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccC-C--Cce----eeeeecccCCcccccccccCh
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-S--PRL----FIRKVLLDCGAVQADALTVDR 88 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~-~--~~~----~~~~~~~~~g~~~~~~~~~~~ 88 (953)
++|+++..+.|.||...+.+|+++|.++||+|+++.+.-... .+.+. . ..| .+.+..+...+...... ..
T Consensus 5 ~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~-~~- 81 (380)
T PRK13609 5 PKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDLFGES-HPVITEITKYLYLKSYTIGKELYRLFYYGVEKI-YD- 81 (380)
T ss_pred CeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEEhHHhc-chHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc-cc-
Confidence 567778888999999999999999999999977665431111 00000 0 000 00000000000000000 00
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHH---HHHhCCcEEEE-ecCChhHHHHHHHhhhccc-
Q 002206 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRA---AADAGIRSVCV-TNFSWDFIYAEYVMAAGHH- 163 (953)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~---A~~~giP~I~i-s~~~~~~~~~~~~~~~~~~- 163 (953)
..... +. .........+++++++||+||+++....+.. +...++|++.+ +++..... +.-...+.
T Consensus 82 ~~~~~----~~---~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~---~~~~~ad~i 151 (380)
T PRK13609 82 KKIFS----WY---ANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHKI---WVHREVDRY 151 (380)
T ss_pred hHHHH----HH---HHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCcc---cccCCCCEE
Confidence 00000 10 1111244567788999999999875433322 23356898754 33331100 00000000
Q ss_pred ---hHHHHHHHHhhccccceEEecCCCCCCCCCCceeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch---
Q 002206 164 ---HRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--- 236 (953)
Q Consensus 164 ---~~~~~~~l~~~~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~-~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--- 236 (953)
.+...+.+.......++ -.++++|..... ....+..+++.+++++++++|++..|+.+..
T Consensus 152 ~~~s~~~~~~l~~~gi~~~k-------------i~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 152 FVATDHVKKVLVDIGVPPEQ-------------VVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred EECCHHHHHHHHHcCCChhH-------------EEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 01111111111000001 112222221111 1123445778888877778888888887652
Q ss_pred HhHHHhhCC-CCcEEE-EeCCCCC----------CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 002206 237 WKLKEEYLP-SGWKCL-VCGASDS----------QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (953)
Q Consensus 237 ~~ll~~ll~-~~~~~v-v~G~~~~----------~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~ 304 (953)
..+.+.+.. +++.++ ++|.... ..++||++++|+++++++|++||++|+++|..|+.||+++|+|+|+
T Consensus 219 ~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~ 298 (380)
T PRK13609 219 KELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVIL 298 (380)
T ss_pred HHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEE
Confidence 233334322 456655 4564321 1356899999998889999999999999998899999999999998
Q ss_pred E-eCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 002206 305 V-RRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (953)
Q Consensus 305 i-P~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l 371 (953)
. |.+ +.|..|+..+++.|+++... +++.+.++|.++++++..+. ..++..+++++.|.+.+
T Consensus 299 ~~~~~--g~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~ 369 (380)
T PRK13609 299 YKPVP--GQEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAEN 369 (380)
T ss_pred CCCCC--CcchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhh
Confidence 5 322 34568999999999987653 35788999999998764321 34567777777777764
No 68
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.70 E-value=2e-15 Score=173.34 Aligned_cols=157 Identities=20% Similarity=0.182 Sum_probs=117.2
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHHHh---hC------CCCc-EEEEeCCCCC---C-----CCCCeEECC
Q 002206 209 SRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEE---YL------PSGW-KCLVCGASDS---Q-----LPPNFIKLP 268 (953)
Q Consensus 209 ~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll~~---ll------~~~~-~~vv~G~~~~---~-----lp~NV~v~~ 268 (953)
.++++++.+++++++++|++..|+.+.+ ..+... .+ .++. .++++|.+.. . ...+|++++
T Consensus 192 ~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G 271 (382)
T PLN02605 192 PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRG 271 (382)
T ss_pred CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEe
Confidence 4567889999987888888888877653 223332 22 2344 5678887532 1 235788899
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHh
Q 002206 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (953)
Q Consensus 269 ~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~ 348 (953)
|++.||++|+++|+||+.+|.+|++||+++|+|+|+.+....+| ..|++.+.+.|.|+.+ . +++.+.++|.++++
T Consensus 272 ~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe-~gn~~~i~~~g~g~~~--~--~~~~la~~i~~ll~ 346 (382)
T PLN02605 272 FVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYIPGQE-EGNVPYVVDNGFGAFS--E--SPKEIARIVAEWFG 346 (382)
T ss_pred ccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCCCccc-hhhHHHHHhCCceeec--C--CHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999998433222 3799999999999865 2 46789999999997
Q ss_pred C-CCCcc---------CCCCHHHHHHHHHHHH
Q 002206 349 L-KPCYE---------GGINGGEVAAHILQET 370 (953)
Q Consensus 349 ~-~~~~~---------~~~~g~~~~A~~i~~~ 370 (953)
+ +..+. ..++++.++++.+.+.
T Consensus 347 ~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 347 DKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 7 43221 4677778888777765
No 69
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.70 E-value=1.7e-15 Score=174.28 Aligned_cols=156 Identities=17% Similarity=0.127 Sum_probs=118.0
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCc-h--HhHHHhhC--CCCcEE-EEeCCCCC---C------CCCCeEECCCCCCHH
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQPA-G--WKLKEEYL--PSGWKC-LVCGASDS---Q------LPPNFIKLPKDAYTP 274 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~~-~--~~ll~~ll--~~~~~~-vv~G~~~~---~------lp~NV~v~~~~~~~p 274 (953)
+.++++.+++++++++|+++.|+.+. . ..+.+.+. .+++.+ +++|.+.. . ..+|+++.+|+++|+
T Consensus 189 ~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~ 268 (391)
T PRK13608 189 QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMN 268 (391)
T ss_pred HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHH
Confidence 45677788887788899999998874 2 23444432 245555 46676531 1 246899999998899
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEE-eCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCc
Q 002206 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFV-RRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY 353 (953)
Q Consensus 275 dlLa~aDlfIthgG~~Tv~Eal~~GvP~l~i-P~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~ 353 (953)
++|+.||+||+++|..|++||+++|+|+|++ |.+ ++|..|+..+++.|+|+... +++.+.++|.++++++..+
T Consensus 269 ~~~~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~p--gqe~~N~~~~~~~G~g~~~~----~~~~l~~~i~~ll~~~~~~ 342 (391)
T PRK13608 269 EWMASSQLMITKPGGITISEGLARCIPMIFLNPAP--GQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGNEQL 342 (391)
T ss_pred HHHHhhhEEEeCCchHHHHHHHHhCCCEEECCCCC--CcchhHHHHHHhCCcEEEeC----CHHHHHHHHHHHhcCHHHH
Confidence 9999999999999989999999999999998 433 34568999999999998754 3567889999999776432
Q ss_pred c---------CCCCHHHHHHHHHHHHH
Q 002206 354 E---------GGINGGEVAAHILQETA 371 (953)
Q Consensus 354 ~---------~~~~g~~~~A~~i~~~l 371 (953)
. ..+++..++++.|.+.+
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 343 TNMISTMEQDKIKYATQTICRDLLDLI 369 (391)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence 1 45678888888888765
No 70
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.69 E-value=6.5e-15 Score=166.81 Aligned_cols=302 Identities=15% Similarity=0.097 Sum_probs=166.3
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (953)
+|++...+. .||+.++..++++|.++||+|++++.... ..........+.+... ...-. ........+..+.
T Consensus 2 ~i~~~~g~~-~g~~~~~~~La~~L~~~g~eV~vv~~~~~-~~~~~~~~~g~~~~~i--~~~~~----~~~~~~~~l~~~~ 73 (348)
T TIGR01133 2 KVVLAAGGT-GGHIFPALAVAEELIKRGVEVLWLGTKRG-LEKRLVPKAGIEFYFI--PVGGL----RRKGSFRLIKTPL 73 (348)
T ss_pred eEEEEeCcc-HHHHhHHHHHHHHHHhCCCEEEEEeCCCc-chhcccccCCCceEEE--eccCc----CCCChHHHHHHHH
Confidence 565554444 59999999999999999999999976321 1111111111222221 00000 0011111111111
Q ss_pred HHhhccHHHHHHHHHHHHHcCCCcEEEECCC---chHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHh
Q 002206 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (953)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~---~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (953)
.+ ........+++++.+||+|++... ..+..++...++|.|.+..-.+..... .+
T Consensus 74 ~~-----~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~--------------~~--- 131 (348)
T TIGR01133 74 KL-----LKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPGLTN--------------KL--- 131 (348)
T ss_pred HH-----HHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCccHHH--------------HH---
Confidence 11 112334467788999999999752 334456777899997542211110000 01
Q ss_pred hccccceEEecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHH-H---hhCCCC
Q 002206 174 DYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYLPSG 247 (953)
Q Consensus 174 ~~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll-~---~ll~~~ 247 (953)
.+..++.++.............+++.|......... ..++.++++++.++|++..|+.+.. .+++ . .+...+
T Consensus 132 ~~~~~d~ii~~~~~~~~~~~~~~i~n~v~~~~~~~~--~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~ 209 (348)
T TIGR01133 132 LSRFAKKVLISFPGAKDHFEAVLVGNPVRQEIRSLP--VPRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEKG 209 (348)
T ss_pred HHHHhCeeEECchhHhhcCCceEEcCCcCHHHhccc--chhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhcC
Confidence 112233333221110000001233444322211111 1123456665566666655555542 1222 2 222234
Q ss_pred cEE-EEeCCCCCC--------CC-CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC-CCchHHH
Q 002206 248 WKC-LVCGASDSQ--------LP-PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY-FNEEPFL 316 (953)
Q Consensus 248 ~~~-vv~G~~~~~--------lp-~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~-~~DQ~~N 316 (953)
+.+ +++|..... ++ .++..+.+ ..++++|+.||++|+++|.++++||+++|+|+|++|.+. ..+|..|
T Consensus 210 ~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~-~~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~ 288 (348)
T TIGR01133 210 IQIVHQTGKNDLEKVKNVYQELGIEAIVTFID-ENMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYN 288 (348)
T ss_pred cEEEEECCcchHHHHHHHHhhCCceEEecCcc-cCHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhH
Confidence 544 445654211 11 22322222 268899999999999999889999999999999998653 2467789
Q ss_pred HHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 317 RNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 317 A~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
++.+++.+.|..++..+.+++.+.++|+++++++.
T Consensus 289 ~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~ 323 (348)
T TIGR01133 289 AKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPA 323 (348)
T ss_pred HHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHH
Confidence 99999999999998888778999999999997763
No 71
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.69 E-value=1.7e-15 Score=165.21 Aligned_cols=167 Identities=15% Similarity=0.177 Sum_probs=123.0
Q ss_pred EEEcCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCC
Q 002206 499 VARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (953)
Q Consensus 499 ~~~APGrv~l~----GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 573 (953)
..+||+||||+ |-..| |+.-..+-.+|+++-++.+.+.++ +.+..
T Consensus 3 ~~~a~aKiNL~L~i~~kr~dgyH~l~s~~~ai~l~d~v~i~~~~~-----------------------~~i~~------- 52 (275)
T PRK14611 3 VLLSPAKVNLGLWILGKRPDGYHEIFTIYHTIDLYDRIYIKEHHT-----------------------LEVKT------- 52 (275)
T ss_pred eeeecceEEeeeccCcCCCCCcchhhheeEeccCCcEEEEEECCc-----------------------EEEEe-------
Confidence 46899999985 66666 888888888999999888876431 11110
Q ss_pred CCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHH
Q 002206 574 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 653 (953)
Q Consensus 574 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~ 653 (953)
+-.. .+ .+.|++..++..+.+..|.. .|++|.+.++||+++|||||||.+
T Consensus 53 -------~~~~-------------------~~--~~~n~v~~a~~~~~~~~g~~--~~~~i~i~k~IP~~~GLGSSsA~a 102 (275)
T PRK14611 53 -------SSPQ-------------------IK--EEENIVYKALRLFERYTGID--INYSIFIEKNIPVGAGLGGGSSNA 102 (275)
T ss_pred -------CCCC-------------------CC--CcccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCccHHHHHH
Confidence 0000 01 14688888887766666654 689999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCC
Q 002206 654 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 733 (953)
Q Consensus 654 va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsg 733 (953)
+|++.|++.+++.+++++++.++|..+|. |...+++||. ++..... +....++.+.+..+++++++
T Consensus 103 aA~l~al~~~~~~~l~~~~l~~la~~i~~----------D~~~~~~Gg~---~~~~~~g-~~~~~~~~~~~~~~vv~~p~ 168 (275)
T PRK14611 103 AVVLKYLNELLGNPLSEEELFELASSISA----------DAPFFLKGGF---ALGRGIG-DKLEFLEKPISREITLVYPN 168 (275)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCC----------CCCeeecCCe---EEEeccC-ceeEECCcCCCcEEEEEeCC
Confidence 99999999999999999999999998763 6555778883 4444332 22234444445679999999
Q ss_pred CccccC
Q 002206 734 IRHSVG 739 (953)
Q Consensus 734 v~~~~~ 739 (953)
+..+|.
T Consensus 169 ~~~sT~ 174 (275)
T PRK14611 169 IKSSTG 174 (275)
T ss_pred CCCChH
Confidence 888774
No 72
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.66 E-value=8e-15 Score=160.81 Aligned_cols=174 Identities=16% Similarity=0.151 Sum_probs=122.4
Q ss_pred eEEEEcCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCcc
Q 002206 497 IFVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (953)
Q Consensus 497 ~~~~~APGrv~l~----GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 571 (953)
.+.+.||+||||+ |--.| ||.-..+-..|+.+=.+.+++.++.. +.+...
T Consensus 6 ~~~~~a~aKiNL~L~i~~kr~dGyH~l~s~~~~i~l~D~l~i~~~~~~~---------------------i~~~~~---- 60 (290)
T PRK14608 6 SLTEFAPAKINLALHVTGRRADGYHLLESLVAFADVGDRLTLEPAEALS---------------------LTVSGP---- 60 (290)
T ss_pred eEEEEeceeEEeeeccCCCCCCCCcceeEEEEECCCCcEEEEEECCCCc---------------------EEEeCC----
Confidence 4567899999995 44444 66666666677777777766543211 111100
Q ss_pred CCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHH
Q 002206 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSAS 651 (953)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA 651 (953)
.. .. - +..+.|++..++..+.++.|... .|++|.+.++||+++|||||||
T Consensus 61 ------~~---~~-------------------i-p~~~~Nlv~ka~~~~~~~~g~~~-~~~~i~i~k~IP~~~GLGsssa 110 (290)
T PRK14608 61 ------FA---AG-------------------L-GDGDDNLVLRAARALRARVGPGL-PPGAFHLEKNLPVAAGIGGGSA 110 (290)
T ss_pred ------Cc---cC-------------------C-CCCCCcHHHHHHHHHHHHhCCCC-CceEEEEEeCCcCcCCchHHHH
Confidence 00 00 0 12346888888877776666322 6899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEe
Q 002206 652 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (953)
Q Consensus 652 ~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~d 731 (953)
.++|++.+++.+++.+++++++.++|..+| .|...+++||. .+..... +..++++.++++.+++++
T Consensus 111 ~aaa~l~~l~~l~~~~ls~~el~~la~~ig----------~dv~~~l~gg~---~~~~g~g-~~~~~l~~~~~~~~vv~~ 176 (290)
T PRK14608 111 DAAAALRLLARLWGLALDDERLAALALSLG----------ADVPVCLDSRP---LIMRGIG-EELTPLPGLPSLPAVLVN 176 (290)
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcchhhcCCe---EEEEecC-CEeEECCCCCCcEEEEEC
Confidence 999999999999999999999999999863 38888999984 3333222 222445434578899999
Q ss_pred CCCccccC
Q 002206 732 SGIRHSVG 739 (953)
Q Consensus 732 sgv~~~~~ 739 (953)
++++.+|.
T Consensus 177 p~~~~sT~ 184 (290)
T PRK14608 177 PGVPVATP 184 (290)
T ss_pred CCCCcChH
Confidence 98887764
No 73
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.65 E-value=5.2e-15 Score=160.24 Aligned_cols=115 Identities=11% Similarity=0.162 Sum_probs=89.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCC
Q 002206 608 KWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGA 687 (953)
Q Consensus 608 ~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~ 687 (953)
.|.|++..++..+.++.+ . .|++|.+.++||+++|||||||.++|++.|++.+++.+++++++.++|..+
T Consensus 62 ~~~Nlv~~a~~~~~~~~~--~-~~~~i~i~k~IP~~aGLGssss~aaa~l~al~~~~~~~l~~~~l~~la~~i------- 131 (269)
T PRK14609 62 PEDNLVVKAYNLLKKDFP--L-PPVHIHLYKHIPIGAGLGGGSSDAAFMLKLLNDKFNLGLSDEELEAYAATL------- 131 (269)
T ss_pred ccccHHHHHHHHHHHHcC--C-CCeEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh-------
Confidence 467888888877666555 3 589999999999999999999999999999999999999999999999976
Q ss_pred CCCccchhhhhccCcceEEEEeecCccceeeeecC-CCeEEEEEeCCCccccC
Q 002206 688 PCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP-SHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 688 ~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p-~~~~~vl~dsgv~~~~~ 739 (953)
| +|...+++|+. .+..... +..++++.+ +++.++++++++.-+|.
T Consensus 132 --G-aDvpffl~g~~---a~~~G~G-e~l~~l~~~~~~~~~vlv~P~~~~sT~ 177 (269)
T PRK14609 132 --G-ADCAFFIRNKP---VYATGIG-DIFSPIDLSLSGYYIALVKPDIHVSTA 177 (269)
T ss_pred --C-CCceEEccCCC---EEEEEeC-CeeEECCCCCCCCEEEEECCCCCCChH
Confidence 3 48777777764 2333233 222455432 56789999998887764
No 74
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.64 E-value=1.6e-14 Score=158.66 Aligned_cols=169 Identities=15% Similarity=0.131 Sum_probs=115.5
Q ss_pred EEEEcCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l~----GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.++||+||||+ |-=.| |+.-.++.++|+++-.|.+++.++ +.+..
T Consensus 4 ~~~~a~aKiNL~L~i~~~r~dgyH~l~si~~~i~l~d~v~v~~~~~-----------------------~~i~~------ 54 (287)
T PRK14616 4 ISVKAFAKINLGLLITGKRPDGYHTLETIFAPINWYDTLTFSPSDT-----------------------ISMSC------ 54 (287)
T ss_pred eEEeeceeEEeeeecCCCCCCCccceeEEEEEcCCCCEEEEEECCC-----------------------EEEEe------
Confidence 457899999985 44445 888888888999998888876421 11110
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
.-.++ | ....|.+..++..+.+..+.. .|++|.|.++||+++|||||||.
T Consensus 55 --------~~~~~-----p---------------~~~~nl~~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSA~ 104 (287)
T PRK14616 55 --------TNLDL-----P---------------VDDSNLCIRAAKALQEYAGVS--KGVSITLDKRVPFGAGLGGGSSD 104 (287)
T ss_pred --------CCCCC-----C---------------CCccHHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCchHHHHH
Confidence 00000 0 012456666666666667753 69999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhh-ccCcceEEEEeecCccceeeeecCCCeEEEEEe
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASA-CGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~-~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~d 731 (953)
++|++.+++.++|.++++++++++|.+.|. |.-+++ +||. .+ .....+..+.+..+..+.+++++
T Consensus 105 aaA~l~al~~l~g~~ls~~el~~~a~~ig~----------Dvp~~l~~gg~---~~-~~g~g~~~~~~~~~~~~~~vvv~ 170 (287)
T PRK14616 105 AATVLRVLNELWEINAPSADLHRLAVKLGA----------DVPYFLEMKGL---AY-ATGIGDELEDLQLTLPFHIVTVF 170 (287)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------CcceEeccCCc---EE-EEEcCceeEECCcCCCcEEEEEC
Confidence 999999999999999999999999999764 422222 3553 22 22222222344444457899998
Q ss_pred CCCccccC
Q 002206 732 SGIRHSVG 739 (953)
Q Consensus 732 sgv~~~~~ 739 (953)
+++.-+|.
T Consensus 171 P~~~vsT~ 178 (287)
T PRK14616 171 PEEHISTV 178 (287)
T ss_pred CCCCcCHH
Confidence 87766653
No 75
>PTZ00299 homoserine kinase; Provisional
Probab=99.63 E-value=8.5e-15 Score=162.13 Aligned_cols=260 Identities=17% Similarity=0.168 Sum_probs=172.1
Q ss_pred eEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCC
Q 002206 497 IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGP 576 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~ 576 (953)
.+.+++|.-.-=+| .|.-+|-+|++++.++.+.+.+.. .+.+...
T Consensus 7 ~~~v~vPATsANlG-----pGFDsLGlAL~lyd~v~v~~~~~~---------------------~i~i~G~--------- 51 (336)
T PTZ00299 7 KVVLRVPATTANIG-----PAYDTLGMALSIFMELTVEHADAF---------------------SMTVEGE--------- 51 (336)
T ss_pred eEEEEEeccccccc-----ccHHHHhhhcccCcEEEEEECCCC---------------------EEEEecC---------
Confidence 46788887654444 477788899999999998875421 1222110
Q ss_pred ceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHH
Q 002206 577 TFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVAS 656 (953)
Q Consensus 577 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~ 656 (953)
..-.+. .+ -.|.+..++..++++++....+|++|.+.++||+++|||||||.+||.
T Consensus 52 -~~~~lp-------------------~~----~~nlv~~a~~~~~~~~~~~~~~g~~i~i~k~IP~~~GLGSSsA~avA~ 107 (336)
T PTZ00299 52 -GSEHIS-------------------TD----EDNMVVQACRLAFEEYAHKSMPPLKFIMHSNIPYGCGCGSSSAAAVAG 107 (336)
T ss_pred -CcCCCC-------------------CC----cchHHHHHHHHHHHHhcCCCCCceEEEEecCCCccCCccHHHHHHHHH
Confidence 000000 01 145555666666666664312589999999999999999999999999
Q ss_pred HHHHHHHhCCCCC---HHHHHHHHHHhhccccCCCCCccchh-hhhccCcceEEEEeecCccc-eeeeecCCCeEEEEEe
Q 002206 657 MSAIAAAHGLNIH---PRDLALLCQKVENHIVGAPCGVMDQM-ASACGEANKLLAMVCQPAEL-LGVVEIPSHIRFWGID 731 (953)
Q Consensus 657 ~~al~~~~~~~l~---~~~l~~~a~~~E~~~~G~~sG~~D~~-~~~~Gg~~~~~~~~~~~~~~-~~~~~~p~~~~~vl~d 731 (953)
+.|++.+++.+++ ++++.++|.+.|.| .||. ++++||.. +.....+.+. ...++.|+++.++++.
T Consensus 108 l~a~n~l~g~~l~~~~~~el~~~A~~~EGH--------pDNVapal~GG~~--~~~~~~~ge~~~~~i~~~~~~~~vv~i 177 (336)
T PTZ00299 108 FVAGMKLCGLTMETENEEALLQAIAKFEGH--------PDNAAPAIYGGIQ--LVYKKDNGRFLTYRVPTPPNLSVVLFV 177 (336)
T ss_pred HHHHHHHhCCCCCccCHHHHHHHHHhhcCC--------cccHHHHHhCCEE--EEEecCCCceEEEecCCCCCeEEEEEE
Confidence 9999999999985 78999999999974 3744 69999942 2221122222 1355666788888885
Q ss_pred CCCc--cccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHH
Q 002206 732 SGIR--HSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALY 809 (953)
Q Consensus 732 sgv~--~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 809 (953)
.+.. -+|. . +
T Consensus 178 P~~~~~~sT~--~------------------------------------------------------------------a 189 (336)
T PTZ00299 178 PHNKMKANTH--V------------------------------------------------------------------T 189 (336)
T ss_pred CCCCccccHH--H------------------------------------------------------------------H
Confidence 4321 1110 0 0
Q ss_pred hhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhh
Q 002206 810 AKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYS 889 (953)
Q Consensus 810 ~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~ 889 (953)
.+.+|+.++ ....+....|+..+..+|.++ |++.+..+.+.-|+-+|
T Consensus 190 R~vLP~~v~-----------------------------~~dav~n~~~~~~lv~al~~~----d~~ll~~~~D~lhep~R 236 (336)
T PTZ00299 190 RNLIPTSVS-----------------------------LEDAVFNISRTSILVLALSTG----DLRMLKSCSDKLHEQQR 236 (336)
T ss_pred HhhCcccCc-----------------------------HHHHHHhhhHHHHHHHHHHhC----CHHHHHhchhcccCccc
Confidence 123444331 112223344555677888886 88888765555888888
Q ss_pred hcCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEecc
Q 002206 890 ACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGR 940 (953)
Q Consensus 890 ~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~ 940 (953)
... -.|+++.+.+.+.+ .|++|+-|+|+| -+|+++.+
T Consensus 237 ~~~-liP~~~~v~~~~~~-----------~Ga~g~~lSGSG--PTv~al~~ 273 (336)
T PTZ00299 237 SDA-LFPHFRPCVKAARE-----------AGAHYAFLSGAG--PSVCALVG 273 (336)
T ss_pred ccc-cCccHHHHHHHHHH-----------CCCeEEEEEchh--hhheEEec
Confidence 522 37999999999987 699999999998 88888866
No 76
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.61 E-value=2.5e-14 Score=164.00 Aligned_cols=296 Identities=16% Similarity=0.087 Sum_probs=169.0
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhc
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 101 (953)
+.|.-.||+.++ +++++|.++|++|+|++.....+....++ ..+.+.. +. . ......+..+..+
T Consensus 11 ~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~-~~~~~~~-------l~--v--~G~~~~l~~~~~~--- 74 (385)
T TIGR00215 11 VAGEASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCE-VLYSMEE-------LS--V--MGLREVLGRLGRL--- 74 (385)
T ss_pred EeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCc-cccChHH-------hh--h--ccHHHHHHHHHHH---
Confidence 445457999999 99999999999999986542221111111 0111111 00 0 0011112222222
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEE-CC-Cch--HHHHHHHhCCcEEEEecC-Chh--HHHHHHHhhhccchHHHHHHHHhh
Q 002206 102 PRKSILKDEVEWLNSIKADLVVS-DV-VPV--ACRAAADAGIRSVCVTNF-SWD--FIYAEYVMAAGHHHRSIVWQIAED 174 (953)
Q Consensus 102 ~~~~~~~~~~~~L~~~kpDlVV~-D~-~~~--~~~~A~~~giP~I~is~~-~~~--~~~~~~~~~~~~~~~~~~~~l~~~ 174 (953)
.....+..+.+++++||+||. |+ .+. ...+|+.+|+|++.+.+. .|. ..-... +....+.+...
T Consensus 75 --~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~waw~~~~~r~-------l~~~~d~v~~~ 145 (385)
T TIGR00215 75 --LKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVWAWRKWRAKK-------IEKATDFLLAI 145 (385)
T ss_pred --HHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHhhcCcchHHH-------HHHHHhHhhcc
Confidence 224456678899999999995 44 222 334778899999876321 122 110000 01111111111
Q ss_pred ccccceEEecCCCCCCCCCCceeecCcccccCC--CChHHHHHHhCCCCCCcEEEEEcCCCCch-Hh----HHH---hhC
Q 002206 175 YSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLH--KSRKEVRKELGIEDDVKLLILNFGGQPAG-WK----LKE---EYL 244 (953)
Q Consensus 175 ~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~~--~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~~----ll~---~ll 244 (953)
++....++.. ......+++.|.....+. +.+++.++.+++++++++|++..||.+.. .. +++ .+.
T Consensus 146 ~~~e~~~~~~-----~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~ 220 (385)
T TIGR00215 146 LPFEKAFYQK-----KNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLE 220 (385)
T ss_pred CCCcHHHHHh-----cCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHH
Confidence 1110000000 000011223332212121 34566788888877888888888888764 11 221 121
Q ss_pred --CCCcEEEEe-CCCC--CC-------C--CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEE----e
Q 002206 245 --PSGWKCLVC-GASD--SQ-------L--PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFV----R 306 (953)
Q Consensus 245 --~~~~~~vv~-G~~~--~~-------l--p~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~i----P 306 (953)
.++..+++. +... .. . +..+..+ ...++++|++||+||+.+|..|+ |++++|+|+|++ |
T Consensus 221 ~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~p 297 (385)
T TIGR00215 221 QQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLI--DGDARKAMFAADAALLASGTAAL-EAALIKTPMVVGYRMKP 297 (385)
T ss_pred HhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEE--CchHHHHHHhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCH
Confidence 235555443 2221 10 1 2234433 33578999999999999997766 999999999999 6
Q ss_pred CCCCC-------chHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 307 RDYFN-------EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 307 ~~~~~-------DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
.+.+- .|..|++.+...++...+...+.+++.+.+.+.++++|+
T Consensus 298 l~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 298 LTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 54321 266789999999999999888999999999999999876
No 77
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.60 E-value=3.1e-14 Score=155.52 Aligned_cols=166 Identities=18% Similarity=0.243 Sum_probs=114.3
Q ss_pred EEEEcCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l~----GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.+.||+||||+ |--.| ||.-..+-.+|+++-.+.+.+.++ . +.+...+
T Consensus 3 ~~~~a~aKiNl~L~i~~~~~dgyH~l~sl~~al~l~d~v~i~~~~~-~---------------------~~i~~~~---- 56 (276)
T PRK14612 3 MERLAPAKVNLGLSVLGRREDGYHELHTLMVPLDVGDRLEVEPIAS-G---------------------LELRVLG---- 56 (276)
T ss_pred eEEeeCcEEeeccccCCCCCCCCceeEEEEEECCCCCEEEEEECCC-c---------------------EEEEcCC----
Confidence 346899999984 66556 888889999999998888876542 1 1111000
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
. ++ | ....|.+..++..++++.|.. .|++|.+.++||+++|||||||.
T Consensus 57 ------~-~~--------p---------------~~~~Nli~ka~~~~~~~~g~~--~~~~I~i~k~IP~~~GLGssSa~ 104 (276)
T PRK14612 57 ------A-DL--------P---------------TDERNLVYRAARAYLDAAGQP--GGVRITLEKRLPLAAGLGGGSSD 104 (276)
T ss_pred ------C-CC--------C---------------CCCcccHHHHHHHHHHHhCCC--CCeEEEEEecCCCcCCCchHHHH
Confidence 0 00 0 012355666666677777753 68999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeC
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 732 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~ds 732 (953)
++|++.+++.+++.+++ +.+++...| .|...+++||. .+...+.... .+++. +.+.++++.+
T Consensus 105 aaa~l~al~~l~~~~l~---l~~ia~~~g----------~dv~~~~~GG~---~~~~g~g~~~-~~l~~-~~~~~vv~~P 166 (276)
T PRK14612 105 AAATLLALAQLYPAPVD---LPALALTLG----------ADVPFFLLGGA---AEARGVGERL-TPLEL-PPVPLVLVNP 166 (276)
T ss_pred HHHHHHHHHHHhCCChH---HHHHHHHhC----------CCcCeeeeCCe---EEEEecCccc-eEcCC-CCcEEEEECC
Confidence 99999999999998765 445554432 38778899984 3332222222 45543 4788999998
Q ss_pred CCccccC
Q 002206 733 GIRHSVG 739 (953)
Q Consensus 733 gv~~~~~ 739 (953)
++..+|.
T Consensus 167 ~~~~sT~ 173 (276)
T PRK14612 167 GVAVSAR 173 (276)
T ss_pred CCCCCHH
Confidence 8777653
No 78
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.58 E-value=2.4e-13 Score=149.50 Aligned_cols=171 Identities=15% Similarity=0.183 Sum_probs=118.5
Q ss_pred eEEEEcCcceecc----ccccc-cCCCeeeccccc-cceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCc
Q 002206 497 IFVARAPGRLDVM----GGIAD-YSGSLVLQMPIR-EACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSE 570 (953)
Q Consensus 497 ~~~~~APGrv~l~----GeH~d-~~g~~vl~~aI~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~ 570 (953)
.+.+.||+||||+ |-..| ||.-..+-.+|+ .+-.+.+++.++.. +.+...+
T Consensus 6 ~~~~~apaKINL~L~v~~kr~DGyH~l~sl~~~i~~~~D~l~i~~~~~~~---------------------i~~~~~~-- 62 (296)
T PRK14615 6 AVTLRSGCKVNLDLRITGVRPDGYHEIDSLFLPLPEPHDELHVRVTDAPG---------------------ITVTCTI-- 62 (296)
T ss_pred eEEEEecceEEeccccCCcCCCCCcceEEEEEECCCCCcEEEEEECCCCC---------------------EEEEECC--
Confidence 4568999999985 66666 888888889998 47788887665321 2221100
Q ss_pred cCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHH
Q 002206 571 LSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSA 650 (953)
Q Consensus 571 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSA 650 (953)
.++ . .. .|.+..++..+.+..+.. .|++|.|.++||+++||||||
T Consensus 63 ---------~~~---------------------~--~~-~Nlv~~a~~~~~~~~~~~--~~~~i~i~k~IP~~~GLGsgs 107 (296)
T PRK14615 63 ---------PDL---------------------D--PE-RNTVTRAYTAFAAATGFR--PPLEVHLRKGIPHGAGLGGGS 107 (296)
T ss_pred ---------CCC---------------------C--CC-ccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCCCCccHHH
Confidence 000 0 01 355666666666666754 689999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeec-CCCeEEEE
Q 002206 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWG 729 (953)
Q Consensus 651 A~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~-p~~~~~vl 729 (953)
|.++|++.+++.+++.+++.+++.++|...|.. .| .+++||. + +..... +..+++++ ++++.+++
T Consensus 108 a~aaa~l~al~~l~~~~l~~~~l~~~a~~~gaD---vP-------ffl~gg~--a-~~~G~G-e~~~~l~~~~~~~~~vl 173 (296)
T PRK14615 108 ADAAALLRHLNSIAPHPLSPEALAKLAAGVGAD---VP-------FFLHNVP--C-RATGIG-EILTPVALGLSGWTLVL 173 (296)
T ss_pred HHHHHHHHHHHHHcCCCcCHHHHHHHHHHhCCC---Ce-------eeccCCC--E-EEEeeE-eEEEECCCCCCCcEEEE
Confidence 999999999999999999999999999987752 33 2333442 1 111111 11244443 34678999
Q ss_pred EeCCCccccC
Q 002206 730 IDSGIRHSVG 739 (953)
Q Consensus 730 ~dsgv~~~~~ 739 (953)
+++++.-+|.
T Consensus 174 ~~P~~~vsT~ 183 (296)
T PRK14615 174 VCPEVQVSTP 183 (296)
T ss_pred ECCCCCcChH
Confidence 9998887764
No 79
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.57 E-value=9.2e-14 Score=150.73 Aligned_cols=168 Identities=15% Similarity=0.197 Sum_probs=118.9
Q ss_pred EEEEcCcceecccccc-----c-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCcc
Q 002206 498 FVARAPGRLDVMGGIA-----D-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~-----d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 571 (953)
+.++||+||||++ |. | ||.-..+..+|+.+-.+.+++.++.. +++.+
T Consensus 7 ~~~~apaKiNL~L-~v~~~r~dGyH~l~s~~~~i~l~D~v~i~~~~~~~---------------------~~i~~----- 59 (271)
T PRK00343 7 LDWPAPAKLNLFL-HITGRRADGYHELQTLFQFLDWGDTLHFEVRDDGE---------------------IRLLT----- 59 (271)
T ss_pred EEEeeeeeEEEEe-ecCCcCCCCCCeeeEEEEEcccceEEEEEECCCCc---------------------EEEeC-----
Confidence 4568999999999 42 1 33444488999999999998765432 22211
Q ss_pred CCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHH
Q 002206 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSAS 651 (953)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA 651 (953)
+..+ ...|.||+..++..+.+..+.. .|++|.|.++||+|+|||||||
T Consensus 60 ---------~~~~---------------------~~~~~N~v~~a~~~l~~~~~~~--~~~~i~i~k~IP~gaGLGssSs 107 (271)
T PRK00343 60 ---------PIPG---------------------VPEEDNLIVRAARLLQKATGTP--LGADISLDKRLPMGGGLGGGSS 107 (271)
T ss_pred ---------CCCC---------------------CCCcccHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCcCCCCcchH
Confidence 0000 0245799999888777766653 6999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEe
Q 002206 652 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (953)
Q Consensus 652 ~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~d 731 (953)
.++|++.|++.+++.++++++++++|.+.|- |...++.|+ ..+..... +..++++.| ...+++++
T Consensus 108 ~aaa~l~al~~l~~~~ls~~el~~la~~iga----------Dvp~~l~g~---~~~~~g~g-~~~~~l~~~-~~~~vl~~ 172 (271)
T PRK00343 108 DAATTLVALNRLWQLGLSRDELAELGLKLGA----------DVPVFVRGH---AAFAEGIG-EILTPVDLP-EKWYLVVK 172 (271)
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------CceEEecCC---cEEEEecC-CEEEECCCC-CcEEEEEe
Confidence 9999999999999999999999999987743 533344443 23333222 222455443 45678898
Q ss_pred CCCccccC
Q 002206 732 SGIRHSVG 739 (953)
Q Consensus 732 sgv~~~~~ 739 (953)
++++.+|.
T Consensus 173 p~~~~sT~ 180 (271)
T PRK00343 173 PGVHISTA 180 (271)
T ss_pred CCCCcChH
Confidence 98887764
No 80
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry []. The function of this domain appears to be to bind galactose [], and it is normally located at the N terminus of these enzymes []. It is associated with IPR013750 from INTERPRO and IPR006204 from INTERPRO. While all enzymes in this entry posses galactokinase activity, some are annotated as N-acetylgalactosamine kinases as they also posses this enzyme activity.; PDB: 1PIE_A 1WUU_A 1S4E_D 2A2C_A 2A2D_A 2AJ4_A 2DEJ_A 2CZ9_A 2DEI_A 3V5R_A ....
Probab=99.56 E-value=1.1e-15 Score=120.17 Aligned_cols=51 Identities=33% Similarity=0.489 Sum_probs=41.8
Q ss_pred HHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEec
Q 002206 485 KAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKI 536 (953)
Q Consensus 485 ~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~ 536 (953)
..|...||.++ .++++|||||+|+|||+||+||.||||||+++|++++++|
T Consensus 2 ~~F~~~fg~~p-~~~~~APGRvnliGeHtDy~gG~Vl~~Ai~~~~~~a~~~r 52 (52)
T PF10509_consen 2 EEFEEFFGEEP-EVVASAPGRVNLIGEHTDYNGGFVLPAAIDLRTYVAVSPR 52 (52)
T ss_dssp HHHHHHHSS---SEEEEEEEEEEEE-TT-GGGT-EEEEEEEEEEEEEEEEEE
T ss_pred hhHHHHhCCCC-CEEEECCceEEecCcccccCCCeEEEEEeeccEEEEEEcC
Confidence 35677889754 4699999999999999999999999999999999999986
No 81
>TIGR00144 beta_RFAP_syn beta-RFAP synthase. This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis. In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.
Probab=99.51 E-value=3.6e-12 Score=141.65 Aligned_cols=112 Identities=14% Similarity=0.227 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
.|.+..++..+++..|. .|++|.|.++||.++|||||||.++|.+.|++.+++.+++++++++++.+.| .+
T Consensus 64 ~n~~~~~~~~~~~~~g~---~~~~i~i~~~IP~~~GLGSsaa~avA~~~a~~~l~~~~ls~~el~~~a~~ge------~s 134 (324)
T TIGR00144 64 RSRIMEAARKTLKHIGS---EGFHFTVRSMFPAHSGLGSGTQLSLAVGRLVSEYYGMKFTAREIAHIVGRGG------TS 134 (324)
T ss_pred HHHHHHHHHHHHHHhCC---CCEEEEEeecCCCccCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCC------CC
Confidence 45666667777777763 5899999999999999999999999999999999999999999999998554 44
Q ss_pred CccchhhhhccCcceEEEEe---ec--------------CccceeeeecCCCeEEEEEeCCCc
Q 002206 690 GVMDQMASACGEANKLLAMV---CQ--------------PAELLGVVEIPSHIRFWGIDSGIR 735 (953)
Q Consensus 690 G~~D~~~~~~Gg~~~~~~~~---~~--------------~~~~~~~~~~p~~~~~vl~dsgv~ 735 (953)
| .|.+++++||. ++.. +. +.....++++| +++++++-....
T Consensus 135 ~-~~va~~~~GG~---vv~~G~~~~~~~~~~~~~~~~~~~~~~~~r~~~p-~~~~vlviP~~~ 192 (324)
T TIGR00144 135 G-IGVASFEDGGF---IVDGGHSSKEKSDFLPSSASSAKPAPVIARYDFP-DWNIILAIPEID 192 (324)
T ss_pred c-cceeeeeeCCE---EEECCcccccccccCcccccCCCCCCeEEecCCC-CcEEEEEecCCC
Confidence 5 36788999993 3321 11 11111344556 899998866544
No 82
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2.7.1.6 from EC), homoserine (2.7.1.39 from EC), mevalonate (2.7.1.36 from EC) and phosphomevalonate (2.7.4.2 from EC) kinases contain, in their N-terminal section, a conserved Gly/Ser-rich region which is probably involved in the binding of ATP [, ]. This group of kinases has been called 'GHMP' (from the first letter of their substrates).; GO: 0005524 ATP binding, 0016301 kinase activity, 0016310 phosphorylation; PDB: 3F0N_B 1PIE_A 2AJ4_A 1K47_E 3GON_A 2R3V_C 3HUL_A 1KVK_A 2R42_A 3D4J_A ....
Probab=99.48 E-value=7.5e-14 Score=118.04 Aligned_cols=67 Identities=39% Similarity=0.607 Sum_probs=63.7
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccC
Q 002206 633 SMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGE 701 (953)
Q Consensus 633 ~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg 701 (953)
+|+++|+||+++|||||||+++|++.+++.+++.++++++++++++.+|+.+ |+++| +|+++++|||
T Consensus 1 ~i~i~s~iP~~~GLgSSaa~~~a~~~a~~~~~~~~~~~~~l~~~a~~~e~~~-g~~~g-~d~~~~~~GG 67 (67)
T PF00288_consen 1 DIEIDSNIPPGSGLGSSAALAVALAAALNKLFGLPLSKEELAKLAQEAERYI-GKPSG-IDDAASAYGG 67 (67)
T ss_dssp EEEEEESSTTTSSSSHHHHHHHHHHHHHHHHTTTSSBHHHHHHHHHHHHHHC-SSSHS-HHHHHHHHCS
T ss_pred CeEEEccCCCCCcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHc-CCCCh-hhHHHHHhCc
Confidence 5899999999999999999999999999999999999999999999999877 99988 5889999997
No 83
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.47 E-value=1.9e-14 Score=145.34 Aligned_cols=127 Identities=20% Similarity=0.188 Sum_probs=94.8
Q ss_pred EEEEEcCCCCch-H-----hHHHhhCCC--Cc-EEEEeCCCCCC--------CCCCeEECCCCCCHHHHHhhcCEEEecC
Q 002206 225 LLILNFGGQPAG-W-----KLKEEYLPS--GW-KCLVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKI 287 (953)
Q Consensus 225 vVlvs~Gs~~~~-~-----~ll~~ll~~--~~-~~vv~G~~~~~--------lp~NV~v~~~~~~~pdlLa~aDlfIthg 287 (953)
+|||++||.+.+ . ..+..+... ++ .++++|..... .+.|+.+++|.++|+++|+.||++||||
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvIs~a 80 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVISHA 80 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEEeCC
Confidence 589999998874 1 111111111 23 45567876421 2368999999988999999999999999
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCC--CchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 288 GYGTVSEALAYKLPFVFVRRDYF--NEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 288 G~~Tv~Eal~~GvP~l~iP~~~~--~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
|.+|++|++++|+|+|++|.+.. .+|..|+..+++.|+++.+...+.+++.|.++|.+++.++.
T Consensus 81 G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 81 GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPE 146 (167)
T ss_dssp -CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH
T ss_pred CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcH
Confidence 99999999999999999997653 39999999999999999999888878899999999987664
No 84
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.45 E-value=5.4e-12 Score=130.75 Aligned_cols=259 Identities=18% Similarity=0.162 Sum_probs=156.3
Q ss_pred cCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhcc
Q 002206 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (953)
Q Consensus 23 ~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (953)
...|+||++|++.||++|.++|..++|++.... +.+ +++ -|+ + +...
T Consensus 11 ~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~----e~~------~~~-~~~-~------f~~~--------------- 57 (318)
T COG3980 11 LEIGMGHVMRTLTLARELEKRGFACLFLTKQDI----EAI------IHK-VYE-G------FKVL--------------- 57 (318)
T ss_pred cccCcchhhhHHHHHHHHHhcCceEEEecccch----hhh------hhh-hhh-h------ccce---------------
Confidence 446899999999999999999999999977421 000 000 000 0 0000
Q ss_pred HHHHHHHHHHHHHcCCCcEEEECCCchHH----HHHHHhCCcEEEEecCChhHHH-HHHHhhhccchHHHHHHHH---hh
Q 002206 103 RKSILKDEVEWLNSIKADLVVSDVVPVAC----RAAADAGIRSVCVTNFSWDFIY-AEYVMAAGHHHRSIVWQIA---ED 174 (953)
Q Consensus 103 ~~~~~~~~~~~L~~~kpDlVV~D~~~~~~----~~A~~~giP~I~is~~~~~~~~-~~~~~~~~~~~~~~~~~l~---~~ 174 (953)
..+....+++.|||++|.|++.... ......+.|.|.+++..-..+. ... ++.... ..
T Consensus 58 ----~~~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~d~d~----------ivN~~~~a~~~ 123 (318)
T COG3980 58 ----EGRGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFKDNDL----------IVNAILNANDY 123 (318)
T ss_pred ----eeecccccccccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchhhhHh----------hhhhhhcchhh
Confidence 0000115788999999999854433 3444678999999765422211 111 111111 11
Q ss_pred ccccceEEecCCCCCCCCCCceeecCccc---cc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch---HhHHHhhCCCC
Q 002206 175 YSHCEFLIRLPGYCPMPAFRDVIDVPLVV---RR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEYLPSG 247 (953)
Q Consensus 175 ~~~~~~l~~~~~~~~~p~~~~v~~vg~~~---~~-~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~---~~ll~~ll~~~ 247 (953)
|. ..|...+ ...|+.. ++ ....+++...+ +..-|++++|+.... .+++..+.+.+
T Consensus 124 y~------------~v~~k~~-~~lGp~y~~lr~eF~~~r~~~~~r-----~~r~ilI~lGGsDpk~lt~kvl~~L~~~~ 185 (318)
T COG3980 124 YG------------LVPNKTR-YYLGPGYAPLRPEFYALREENTER-----PKRDILITLGGSDPKNLTLKVLAELEQKN 185 (318)
T ss_pred cc------------ccCcceE-EEecCCceeccHHHHHhHHHHhhc-----chheEEEEccCCChhhhHHHHHHHhhccC
Confidence 10 0011001 1222211 10 11223333221 344699999987764 24555565555
Q ss_pred cEE-EEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHH
Q 002206 248 WKC-LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLR 317 (953)
Q Consensus 248 ~~~-vv~G~~~~~---------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA 317 (953)
+.+ +|.|+..+. ..+|+..+-+..+|+.+|..||+.|+.+| .|++|++..|+|.+.++. ..-|-.-|
T Consensus 186 ~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~aI~AaG-stlyEa~~lgvP~l~l~~--a~NQ~~~a 262 (318)
T COG3980 186 VNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADLAISAAG-STLYEALLLGVPSLVLPL--AENQIATA 262 (318)
T ss_pred eeEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcchheeccc-hHHHHHHHhcCCceEEee--eccHHHHH
Confidence 533 455755443 24677666667789999999999999888 899999999999999994 44667789
Q ss_pred HHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 318 NMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 318 ~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++++..|+...+... +........+.++.+++
T Consensus 263 ~~f~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 263 KEFEALGIIKQLGYH-LKDLAKDYEILQIQKDY 294 (318)
T ss_pred HHHHhcCchhhccCC-CchHHHHHHHHHhhhCH
Confidence 999999999888755 44445555666666555
No 85
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.43 E-value=1.3e-11 Score=135.93 Aligned_cols=112 Identities=7% Similarity=0.098 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
.|.+..++..+.+..+.. .|++|.|.++||+++|||||||.+++++.+++..+++ ...+++.++|.+.|
T Consensus 74 ~Nlv~ka~~~~~~~~~~~--~~v~I~i~K~IP~~aGLGggSs~Aaa~l~~l~~~~~l-~~~e~L~~lA~~lG-------- 142 (297)
T PRK14613 74 QNILYKTFIKARSLFPEL--PGVKIHLTKRISPAGGLGGGSTNAASLLNFLFSWRNF-FTSDEMQVFAKEIG-------- 142 (297)
T ss_pred cchHHHHHHHHHHHhCCC--CCeEEEEEeCCCccCCccccHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHhC--------
Confidence 577877777777766653 6899999999999999999999988887777765544 23367777988773
Q ss_pred CccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccC
Q 002206 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 690 G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~ 739 (953)
.|. ++++||. ..+..... +..+++++|+.+. +++.+++.-+|.
T Consensus 143 --aDv-P~~l~G~--~a~~~g~G-e~~~~l~~~~~~~-vlv~P~~~vsT~ 185 (297)
T PRK14613 143 --SDV-PFFLGEG--HAFVTGKG-EIMEEIEVHKGQG-ILALTPQVMNTG 185 (297)
T ss_pred --Ccc-chhhcCC--eEEEecCC-cEEEEcCCCCCeE-EEEECCCCcChH
Confidence 274 4445553 23344333 2235565555554 566676665553
No 86
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.42 E-value=1.1e-11 Score=142.41 Aligned_cols=317 Identities=15% Similarity=0.107 Sum_probs=165.1
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (953)
+|++ +.|.-.||+.++. ++++|.++++++.++...........++ ..+.+.. +.. ......+..+.
T Consensus 3 ki~i-~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----l~~-------~g~~~~~~~~~ 68 (380)
T PRK00025 3 RIAI-VAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCE-SLFDMEE----LAV-------MGLVEVLPRLP 68 (380)
T ss_pred eEEE-EecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCc-cccCHHH----hhh-------ccHHHHHHHHH
Confidence 5544 3444469999998 9999999999998876432222222121 0111000 000 01111111121
Q ss_pred HHhhccHHHHHHHHHHHHHcCCCcEEEEC-C-CchH--HHHHHHhCCcEEEE-ecCChhHHHHHHHhhhccchHHHHHHH
Q 002206 97 ETAVAPRKSILKDEVEWLNSIKADLVVSD-V-VPVA--CRAAADAGIRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQI 171 (953)
Q Consensus 97 ~~~~~~~~~~~~~~~~~L~~~kpDlVV~D-~-~~~~--~~~A~~~giP~I~i-s~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (953)
.+ ........+++++++||+|+.. + ..+. ..++...++|++.+ ++..|... .... ..+.
T Consensus 69 ~~-----~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~~-~~~~-------~~~~--- 132 (380)
T PRK00025 69 RL-----LKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAWR-QGRA-------FKIA--- 132 (380)
T ss_pred HH-----HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhcC-chHH-------HHHH---
Confidence 11 1234455678899999999864 2 1222 23456789998776 32222210 0000 0000
Q ss_pred HhhccccceEEecCCCCC--CCCC-CceeecCcccc--c-CCCChHHHHHHhCCCCCCcEEEEEcCCCCchH----h-HH
Q 002206 172 AEDYSHCEFLIRLPGYCP--MPAF-RDVIDVPLVVR--R-LHKSRKEVRKELGIEDDVKLLILNFGGQPAGW----K-LK 240 (953)
Q Consensus 172 ~~~~~~~~~l~~~~~~~~--~p~~-~~v~~vg~~~~--~-~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~~----~-ll 240 (953)
..++.++....... .... .++..+|.... . ....+.++++.+++++++++|++..||.+... . +.
T Consensus 133 ----~~~d~i~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~ 208 (380)
T PRK00025 133 ----KATDHVLALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFL 208 (380)
T ss_pred ----HHHhhheeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 00111111000000 0000 01333343111 1 12235567778888767777778778765531 1 11
Q ss_pred H---hhC--CCCcEEEEeCC-CC--CC-------C-CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 002206 241 E---EYL--PSGWKCLVCGA-SD--SQ-------L-PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (953)
Q Consensus 241 ~---~ll--~~~~~~vv~G~-~~--~~-------l-p~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~ 304 (953)
+ .+. .+++.+++.|. .. .. . .-++.+. ...++++|+.||++|+.+|.+++ |++++|+|+|+
T Consensus 209 ~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~aDl~v~~sG~~~l-Ea~a~G~PvI~ 285 (380)
T PRK00025 209 KAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLL--DGQKREAMAAADAALAASGTVTL-ELALLKVPMVV 285 (380)
T ss_pred HHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEE--cccHHHHHHhCCEEEECccHHHH-HHHHhCCCEEE
Confidence 2 121 23555665543 22 11 2 2245443 24688999999999999997666 99999999999
Q ss_pred EeCCCCCchHHHHHHH------------HHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc-----------C-CCCHH
Q 002206 305 VRRDYFNEEPFLRNML------------EFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-----------G-GINGG 360 (953)
Q Consensus 305 iP~~~~~DQ~~NA~~l------------~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~-----------~-~~~g~ 360 (953)
+|... +=+...++.+ ...+++..+..++.+++.+.+++.++++|+..+. . .++++
T Consensus 286 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~a~ 364 (380)
T PRK00025 286 GYKVS-PLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQLRCGAD 364 (380)
T ss_pred EEccC-HHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHH
Confidence 96321 1112233333 2233333344456678899999999998875321 1 55677
Q ss_pred HHHHHHHHHHH
Q 002206 361 EVAAHILQETA 371 (953)
Q Consensus 361 ~~~A~~i~~~l 371 (953)
.++++.|.+++
T Consensus 365 ~~~~~~i~~~~ 375 (380)
T PRK00025 365 ERAAQAVLELL 375 (380)
T ss_pred HHHHHHHHHHh
Confidence 77777777664
No 87
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.27 E-value=2.7e-10 Score=130.95 Aligned_cols=314 Identities=13% Similarity=0.106 Sum_probs=170.9
Q ss_pred CcchHHHHHHHHHHHHH--CCCcEE---EEeCCCCcccccccCCCceeeeeecccCCcccccccc-cChHHHHHHHHHHh
Q 002206 26 GFGHATRVVEVVRNLIS--AGHDVH---VVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSETA 99 (953)
Q Consensus 26 G~GH~~r~l~La~~L~~--rGHeVt---~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~ 99 (953)
|.|-=.-+++|+++|.+ .|++|. +++....+ ....++..+ .+.. ...| ++. ......+..+..
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~-e~~~ip~~g-~~~~--~~sg-----g~~~~~~~~~~~~~~~-- 74 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAY-QNLGIPIIG-PTKE--LPSG-----GFSYQSLRGLLRDLRA-- 74 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH-hhCCCceeC-CCCC--CCCC-----CccCCCHHHHHHHHHh--
Confidence 44667778999999998 699999 88664322 222232100 1110 0111 111 111122222222
Q ss_pred hccHHHHHHHHHHHHHcC--CCcEEEECCCchHHHHHHHhCCcEEEE----ecCChh--------HHHHHHHhhhccchH
Q 002206 100 VAPRKSILKDEVEWLNSI--KADLVVSDVVPVACRAAADAGIRSVCV----TNFSWD--------FIYAEYVMAAGHHHR 165 (953)
Q Consensus 100 ~~~~~~~~~~~~~~L~~~--kpDlVV~D~~~~~~~~A~~~giP~I~i----s~~~~~--------~~~~~~~~~~~~~~~ 165 (953)
.......+..+.++++ +||+|++--.+..+.+|...++|++.+ +|+.|. +.|..+. +..+.
T Consensus 75 --gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~---G~~~~ 149 (396)
T TIGR03492 75 --GLVGLTLGQWRALRKWAKKGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLE---GSLYL 149 (396)
T ss_pred --hHHHHHHHHHHHHHHHhhcCCEEEEECcHHHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccC---CCccC
Confidence 0112334446677888 999999877556888899999999884 344321 1111111 11111
Q ss_pred HH-HHHHHhhccccceEEecCCCCCCCCC----CceeecCccc-cc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch-H
Q 002206 166 SI-VWQIAEDYSHCEFLIRLPGYCPMPAF----RDVIDVPLVV-RR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG-W 237 (953)
Q Consensus 166 ~~-~~~l~~~~~~~~~l~~~~~~~~~p~~----~~v~~vg~~~-~~-~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~ 237 (953)
.+ .+.+.. +.++.++. ++......+ .++..+|--+ +. ....+ . +++++.++|++..||.+.. .
T Consensus 150 p~e~n~l~~--~~a~~v~~-~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~~----~--~l~~~~~~lllLpGSR~ae~~ 220 (396)
T TIGR03492 150 PWERWLMRS--RRCLAVFV-RDRLTARDLRRQGVRASYLGNPMMDGLEPPER----K--PLLTGRFRIALLPGSRPPEAY 220 (396)
T ss_pred HHHHHHhhc--hhhCEEeC-CCHHHHHHHHHCCCeEEEeCcCHHhcCccccc----c--ccCCCCCEEEEECCCCHHHHH
Confidence 11 011111 12333321 111100000 1344455421 11 11111 1 4445667899999988763 1
Q ss_pred ----hHHH---hhCC-CCcEEE-Ee-CCCCC----------CCC--------------CCeEECCCCCCHHHHHhhcCEE
Q 002206 238 ----KLKE---EYLP-SGWKCL-VC-GASDS----------QLP--------------PNFIKLPKDAYTPDFMAASDCM 283 (953)
Q Consensus 238 ----~ll~---~ll~-~~~~~v-v~-G~~~~----------~lp--------------~NV~v~~~~~~~pdlLa~aDlf 283 (953)
.+++ .+.. ++..++ .+ |.... .+. +++.+..+...++++|++||++
T Consensus 221 ~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADlv 300 (396)
T TIGR03492 221 RNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADLG 300 (396)
T ss_pred ccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCEE
Confidence 1222 2221 345443 33 43221 111 1355556666788999999999
Q ss_pred EecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc----CcEEEEecCCCChhhHHHHHHHHHhCCCCcc-----
Q 002206 284 LGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY----QGGVEMIRRDLLTGHWKPYLERAISLKPCYE----- 354 (953)
Q Consensus 284 IthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~----G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~----- 354 (953)
|+.+|..| .|++++|+|+|++|.+ ..|. |+..+++. |.++.+...+ .+.+.+++.++++++..+.
T Consensus 301 I~rSGt~T-~E~a~lg~P~Ilip~~--~~q~-na~~~~~~~~l~g~~~~l~~~~--~~~l~~~l~~ll~d~~~~~~~~~~ 374 (396)
T TIGR03492 301 IAMAGTAT-EQAVGLGKPVIQLPGK--GPQF-TYGFAEAQSRLLGGSVFLASKN--PEQAAQVVRQLLADPELLERCRRN 374 (396)
T ss_pred EECcCHHH-HHHHHhCCCEEEEeCC--CCHH-HHHHHHhhHhhcCCEEecCCCC--HHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999545 9999999999999954 3464 99888874 7777776444 3788999999987764221
Q ss_pred -----CCCCHHHHHHHHHHHH
Q 002206 355 -----GGINGGEVAAHILQET 370 (953)
Q Consensus 355 -----~~~~g~~~~A~~i~~~ 370 (953)
..++++.++|+.|.+.
T Consensus 375 ~~~~lg~~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 375 GQERMGPPGASARIAESILKQ 395 (396)
T ss_pred HHHhcCCCCHHHHHHHHHHHh
Confidence 3456666676666553
No 88
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.26 E-value=1.7e-10 Score=126.20 Aligned_cols=167 Identities=17% Similarity=0.179 Sum_probs=112.6
Q ss_pred EEEEcCcceecc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l~----GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.+.||+||||+ |-..| |+.-..+-++|+.+=.+.+++.++.. .+.+..
T Consensus 4 ~~~~apAKINL~L~v~g~r~dGyH~l~s~~~~i~l~D~l~i~~~~~~~--------------------~~~~~~------ 57 (283)
T PRK14610 4 FLVKAPAKINLFLHIVGKSESGYHLLESLFVFVNLYDFLEIKIGSKNR--------------------GVEFVN------ 57 (283)
T ss_pred eEEeecceEEeeeccCCcCCCCcchhheeeEEcCCCCEEEEEECCCCC--------------------eEEEeC------
Confidence 567899999985 55555 66666666777777777776553210 111110
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
.. .+ ... .|++..++..+.+..+.. .|++|.+..+||+++|||||||-
T Consensus 58 ----~~--~~-----------------------~~~-~Nlv~kA~~~l~~~~~~~--~g~~i~i~K~IP~~aGLGggSs~ 105 (283)
T PRK14610 58 ----SL--KI-----------------------NRY-NNTVQRAIGLLLRHSPVR--TNVYVKVIKNIPVSAGLAGGSAD 105 (283)
T ss_pred ----CC--CC-----------------------CCC-CcHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCCCcCCccHHH
Confidence 00 00 011 577777777777767754 59999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeec-CCCeEEEEEe
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWGID 731 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~-p~~~~~vl~d 731 (953)
++|++.+|+.+++ ++.+++.+++.. .| .|.-.+++||. .+..... +..++++. +....++++.
T Consensus 106 aaa~L~~ln~l~~--ls~~~l~~ia~~---------lG-aDvPffl~g~~---a~~~G~G-e~l~~l~~~~~~~~~vl~~ 169 (283)
T PRK14610 106 AAAVIRLLGKLWG--IDEQILNELALS---------VG-SDVPACLDSKT---LFVRGIG-EDILLLPDLSLPTYVVLVA 169 (283)
T ss_pred HHHHHHHHHHHhC--CCHHHHHHHHHH---------hC-CCCcEEEECCe---EEEEecc-cEEEECcccCCCCeEEEEE
Confidence 9999999999996 699999999886 35 59988999884 3444333 33244432 1233467775
Q ss_pred C-CCcccc
Q 002206 732 S-GIRHSV 738 (953)
Q Consensus 732 s-gv~~~~ 738 (953)
. ++.-+|
T Consensus 170 p~~~~~sT 177 (283)
T PRK14610 170 PKGKFLST 177 (283)
T ss_pred CCCCccCh
Confidence 4 555454
No 89
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.21 E-value=2.9e-09 Score=125.74 Aligned_cols=308 Identities=16% Similarity=0.028 Sum_probs=161.1
Q ss_pred CceEEEEEEecCC---C-cchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccCh
Q 002206 13 SKHLVFAYYVTGH---G-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDR 88 (953)
Q Consensus 13 m~~l~il~~v~~~---G-~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (953)
+++|+|++++... . .|=-.+...++++|.++||+|++++..+... ... ..+.+.. ... ...+.
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~--~~~--~g~~v~~----~~~-----~~~~~ 122 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVP--QEF--HGAKVIG----SWS-----FPCPF 122 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCC--ccc--cCceeec----cCC-----cCCcc
Confidence 6667777765321 1 2444688899999999999999998754211 000 0111100 000 00000
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCC----chHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccch
Q 002206 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVV----PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHH 164 (953)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~----~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~ 164 (953)
... ....+. ......+.+++.+||+|++... ..++.+++..++|+|...+..+......+.. ....
T Consensus 123 ~~~--~~~~~~------~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~--~~~~ 192 (465)
T PLN02871 123 YQK--VPLSLA------LSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTF--SWLV 192 (465)
T ss_pred CCC--ceeecc------CCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccc--hhhH
Confidence 000 000010 0112345678899999997652 2344467788999987432111111100000 0000
Q ss_pred HHHHHHHHhhccccceEEecCCC--------CCC-CCCCceeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCC
Q 002206 165 RSIVWQIAEDYSHCEFLIRLPGY--------CPM-PAFRDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQ 233 (953)
Q Consensus 165 ~~~~~~l~~~~~~~~~l~~~~~~--------~~~-p~~~~v~~vg~~~~~--~~~~~~e~~~~l~~~~~~~vVlvs~Gs~ 233 (953)
..+.......+..++.++..+.. ... +....+++.|..... +...+.+.+..+....+...++++.|+.
T Consensus 193 ~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl 272 (465)
T PLN02871 193 KPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRL 272 (465)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCC
Confidence 11100011222334444332110 000 111123444443221 2222344555543222233456777887
Q ss_pred Cch--Hh-HHHhhC-CCCcEEEEeCCCCCC-------CCCCeEECCCCC--CHHHHHhhcCEEEecCC----hhHHHHHH
Q 002206 234 PAG--WK-LKEEYL-PSGWKCLVCGASDSQ-------LPPNFIKLPKDA--YTPDFMAASDCMLGKIG----YGTVSEAL 296 (953)
Q Consensus 234 ~~~--~~-ll~~ll-~~~~~~vv~G~~~~~-------lp~NV~v~~~~~--~~pdlLa~aDlfIthgG----~~Tv~Eal 296 (953)
+.. .. +.+.+. -+++.++++|..... ...||+++++++ .++++|+.+|+||.... ..++.||+
T Consensus 273 ~~~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAm 352 (465)
T PLN02871 273 GAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAM 352 (465)
T ss_pred chhhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHH
Confidence 763 22 222221 146788888865421 135788888873 57899999999996542 24789999
Q ss_pred HcCCcEEEEeCCCCCchHHHHHHHHH---cCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 297 AYKLPFVFVRRDYFNEEPFLRNMLEF---YQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 297 ~~GvP~l~iP~~~~~DQ~~NA~~l~~---~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
++|+|+|+....+.. +.++. .+.|..++..| ++.+.++|.++++++.
T Consensus 353 A~G~PVI~s~~gg~~------eiv~~~~~~~~G~lv~~~d--~~~la~~i~~ll~~~~ 402 (465)
T PLN02871 353 ASGVPVVAARAGGIP------DIIPPDQEGKTGFLYTPGD--VDDCVEKLETLLADPE 402 (465)
T ss_pred HcCCCEEEcCCCCcH------hhhhcCCCCCceEEeCCCC--HHHHHHHHHHHHhCHH
Confidence 999999998754332 33555 67898888766 4689999999998764
No 90
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.18 E-value=8.6e-10 Score=119.26 Aligned_cols=113 Identities=15% Similarity=0.120 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
.|.+..++..+.+..+.+ .|++|.+.++||+++|||||||-++|++.+++++++.+++++++.++|.+.|.
T Consensus 61 ~Nlv~ra~~~l~~~~g~~--~~v~I~i~K~IP~gaGLGggSS~aAa~L~~ln~l~~~~ls~~eL~~lA~~lGa------- 131 (288)
T PRK00650 61 SNSIWKSVALFRRYTGIT--TPVSWRVVKQIPIGAGLAGGSSNAATALFALNQIFQTGLSDEELRSLAEKIGM------- 131 (288)
T ss_pred ccHHHHHHHHHHHHhCCC--CCeEEEEeeCCCCcCCcCcchhHHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC-------
Confidence 577777777776666754 58999999999999999999999999999999999999999999999998874
Q ss_pred CccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCcccc
Q 002206 690 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 738 (953)
Q Consensus 690 G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~ 738 (953)
|.-.++.||. + +.... .+..+.++.+++..++++..++.-+|
T Consensus 132 ---DvPffl~~g~--a-~~~G~-Ge~l~~~~~~~~~~~vlv~P~~~vsT 173 (288)
T PRK00650 132 ---DTPFFFSTGS--A-LGVGR-GEKIIALEESVSDRYVLYFSSEGVLT 173 (288)
T ss_pred ---cchhhhcCce--E-EEEec-CCEEEECcCCCCceEEEEeCCCCCCh
Confidence 4445555552 2 22222 23224555445567888766544443
No 91
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=99.16 E-value=3.6e-09 Score=109.41 Aligned_cols=164 Identities=21% Similarity=0.294 Sum_probs=114.3
Q ss_pred EEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCce
Q 002206 499 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 578 (953)
Q Consensus 499 ~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 578 (953)
.++|+|-+.++--.++-.|+ +++|++.+.+.++..++.+++ ..
T Consensus 4 ~a~A~g~~TIiNAiatG~G~---AfgidL~v~a~v~~~~~~~~~-----------------------------~~----- 46 (278)
T COG1685 4 RARAYGGGTIINAIATGKGS---AFGIDLKVEAEVRLSDEGKVR-----------------------------GE----- 46 (278)
T ss_pred eEEecCceeEeeehhcCccc---eeeecceEEEEEEEcCccccc-----------------------------cC-----
Confidence 46788888888777777666 489999988888776532210 00
Q ss_pred eccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002206 579 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 658 (953)
Q Consensus 579 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~ 658 (953)
+ ..+ .+.+..++..+.+++|.. .|+++.++|+||.++||.||||++.|++.
T Consensus 47 --~------------------------~~d-~~li~~~~~~v~e~~g~~--~~~~v~v~SeiP~~~GLkSSSA~~nAlv~ 97 (278)
T COG1685 47 --P------------------------EGD-TRLIERCVERVREKYGIP--LGVEVEVESEIPVGSGLKSSSAASNALVK 97 (278)
T ss_pred --C------------------------CCC-hHHHHHHHHHHHHHcCCC--cceEEEEecCCCcccCcchhHHHHHHHHH
Confidence 0 000 233444556667778865 58999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHhhccccCCC-CCccc-hhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCC
Q 002206 659 AIAAAHGLNIHPRDLALLCQKVENHIVGAP-CGVMD-QMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 733 (953)
Q Consensus 659 al~~~~~~~l~~~~l~~~a~~~E~~~~G~~-sG~~D-~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsg 733 (953)
|++.+.|.++++.++..+..++-+. .|.. .|-.| ..++.+|| +.+.|.+.+++......| +.+.+|.-.|
T Consensus 98 A~~~~~g~~~~~~~i~~l~a~~S~~-aGvSvTGA~DDa~AS~~GG---~~iTDN~~m~Ilrr~~~~-~~~vlI~~p~ 169 (278)
T COG1685 98 AVLKALGEEIDDFEILRLGARASKE-AGVSVTGAFDDACASYLGG---IVITDNRKMRILRRLDLP-ELTVLILAPG 169 (278)
T ss_pred HHHHHcCCCCChhHHHHHHHHHHHh-cCceEeccchHHHHHHhCC---eEEecchhheehhccccC-CceEEEEecC
Confidence 9999999999999999998877654 3432 44444 55799999 456666555543333444 4555554333
No 92
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.12 E-value=9.1e-09 Score=117.28 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=89.4
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch---HhHHHh---hC-CCCcEEEEeCCCCC-----------CCCCCeEECCCCCCH
Q 002206 212 EVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL-PSGWKCLVCGASDS-----------QLPPNFIKLPKDAYT 273 (953)
Q Consensus 212 e~~~~l~~~~~~~vVlvs~Gs~~~~---~~ll~~---ll-~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~ 273 (953)
..++.++.++ .+.+++++|..... ..+++. +. ..++.+++.|.... .+.++|++.++.+.+
T Consensus 186 ~~~~~~~~~~-~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (371)
T cd04962 186 ALKRRLGAPE-GEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHV 264 (371)
T ss_pred HHHHhcCCCC-CCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccH
Confidence 4455666653 44567777876552 223332 22 23567777776542 135789999988888
Q ss_pred HHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 274 PDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 274 pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
+++|+.+|++|.-. ...++.||+++|+|+|+.+.++. .+.++....|..++..+ .+++.++|.+++++
T Consensus 265 ~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~------~e~i~~~~~G~~~~~~~--~~~l~~~i~~l~~~ 336 (371)
T cd04962 265 EELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGI------PEVVKHGETGFLVDVGD--VEAMAEYALSLLED 336 (371)
T ss_pred HHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCc------hhhhcCCCceEEcCCCC--HHHHHHHHHHHHhC
Confidence 89999999999543 34699999999999999875433 34466656788777655 46888999999876
Q ss_pred C
Q 002206 350 K 350 (953)
Q Consensus 350 ~ 350 (953)
+
T Consensus 337 ~ 337 (371)
T cd04962 337 D 337 (371)
T ss_pred H
Confidence 6
No 93
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.12 E-value=8.8e-09 Score=116.12 Aligned_cols=290 Identities=16% Similarity=0.107 Sum_probs=154.2
Q ss_pred cchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccHHHH
Q 002206 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (953)
Q Consensus 27 ~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (953)
.|+..+...++++|.++||+|++++......... .. ....++.. ..... ...... + ..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~-~~-~~~~~~~~--~~~~~--~~~~~~----------~------~~ 71 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEG-PA-RVVPVPSV--PLPGY--PEIRLA----------L------PP 71 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCchhhccC-CC-Cceeeccc--ccCcc--cceEec----------c------cc
Confidence 6899999999999999999999998753211110 00 00111100 00000 000000 0 00
Q ss_pred HHHHHHHHHcCCCcEEEECCC----chHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHH-HhhccccceE
Q 002206 107 LKDEVEWLNSIKADLVVSDVV----PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AEDYSHCEFL 181 (953)
Q Consensus 107 ~~~~~~~L~~~kpDlVV~D~~----~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~l 181 (953)
.....+.+++.+||+|+.+.. ..+..+++..++|++..-+..|......+... ........+ ...+..++.+
T Consensus 72 ~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~i 148 (364)
T cd03814 72 RRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLG---PLSWLAWAYLRWFHNRADRV 148 (364)
T ss_pred hhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccc---hHhHhhHHHHHHHHHhCCEE
Confidence 111234457789999997642 33455677789998875433322111111000 011111111 1222334444
Q ss_pred EecCCCC----CCCCCCce--eecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCch--Hh-HHH---hhCC-C
Q 002206 182 IRLPGYC----PMPAFRDV--IDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WK-LKE---EYLP-S 246 (953)
Q Consensus 182 ~~~~~~~----~~p~~~~v--~~vg~~~~~--~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~-ll~---~ll~-~ 246 (953)
+..+... ......++ ++.|..... +...+...++.++ ...+.++++.|+.... .. +.+ .+.. +
T Consensus 149 ~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~ 226 (364)
T cd03814 149 LVPSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRP 226 (364)
T ss_pred EeCCHHHHHHHhccCCCceeecCCCccccccCcccccHHHHHHhC--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcC
Confidence 3221100 00001122 222222111 1122223334444 2344567777876542 22 222 2222 4
Q ss_pred CcEEEEeCCCCCC-----CCCCeEECCCCC--CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHH
Q 002206 247 GWKCLVCGASDSQ-----LPPNFIKLPKDA--YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPF 315 (953)
Q Consensus 247 ~~~~vv~G~~~~~-----lp~NV~v~~~~~--~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~l~iP~~~~~DQ~~ 315 (953)
++.++++|..... ..+||.+.++.+ .++++|+.+|++|..+. .+++.||+++|+|+|+.+.+.
T Consensus 227 ~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~------ 300 (364)
T cd03814 227 PVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGG------ 300 (364)
T ss_pred CceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCC------
Confidence 6788888865421 467899888643 46689999999997653 368999999999999988543
Q ss_pred HHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 316 LRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 316 NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
+.+.++..+.|..++..+ .+.+.++|.+++.+++
T Consensus 301 ~~~~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 301 PADIVTDGENGLLVEPGD--AEAFAAALAALLADPE 334 (364)
T ss_pred chhhhcCCcceEEcCCCC--HHHHHHHHHHHHcCHH
Confidence 344466678898887655 4579999999998763
No 94
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=99.06 E-value=4.2e-13 Score=148.42 Aligned_cols=342 Identities=33% Similarity=0.364 Sum_probs=234.1
Q ss_pred CcEEEEEcCCCCchHhHHHhhCCCCcEEEEeCCCCC-CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCc
Q 002206 223 VKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDS-QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLP 301 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~~~ll~~ll~~~~~~vv~G~~~~-~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP 301 (953)
.+...+.+|++..++.+.+. ..|.+.+++.... .+|+|+......-..++..++.++.+..||+.+..|++....+
T Consensus 141 vGl~~l~~g~vPtgsgLsSs---aa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~~ae~~~G~~~gGmdq~asvl~~~~~ 217 (489)
T KOG0631|consen 141 VGLSILNDGSVPTGSGLSSS---AAWLCAAALATLKLNLGPNFIISKKDLATITVVAESYIGLNSGGMDQAASVLAEKGH 217 (489)
T ss_pred cceEEEecCCCCCCCCcchh---HHHHHHHHHHHHHHhcCCCcccchhhhhcceEEeecccCcCCCcHHHHHHHHHhcCc
Confidence 46778888887765333331 0122222222111 1356655433222224666788899999999999999999999
Q ss_pred EEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHccCCCcCCCC
Q 002206 302 FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKL 381 (953)
Q Consensus 302 ~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~~~~~~~~~~ 381 (953)
.+.+. +. +.+..+.+++....|+.+-..++....+.....+-.+.. .+.....+-.-++.+..+..
T Consensus 218 Al~v~-~~--~~Pf~~~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlR-v~E~~ia~~~la~k~~~~~~---------- 283 (489)
T KOG0631|consen 218 ALLVD-PY--FTPFRRSMLKLPDGGVFVIANSLVESNKAETAETNYNLR-VVEGTIAAGELAAKILVELP---------- 283 (489)
T ss_pred eEEec-cc--CCccccccccCCCCceEEEechhhhhcchhhhhhhhhce-eEeeehhhHHHHHHhhcccH----------
Confidence 99997 22 447788889999999999888887676665665555443 45456666666666665541
Q ss_pred chhhhhHHHHHhccccccCCCcccCcccccccccccccCccCCCCCCCCCCCCccccccccceeccCCCCCCchHHHHHH
Q 002206 382 SGARRLRDAIIFGYELQRVPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLSTEDFEILHGDCQGLPDTMSFLK 461 (953)
Q Consensus 382 ~ga~~Lr~a~~~~~~~q~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (953)
|+.++|+.|+. .++ .+|.||+-.+++|+. + +..+++ |+|++++.|-+.+.|+..|++
T Consensus 284 --------~~~~~~~~~~~-~~~-~i~~~~~~~~~~l~~---v---~~~~~~-------e~f~~ee~~~~l~~~~~~f~~ 340 (489)
T KOG0631|consen 284 --------AYILRYQLQRA-WRG-DIGEGYERAEEMLGL---V---EESLKP-------EGFNIEEVARALGLDTEEFLQ 340 (489)
T ss_pred --------HHHHhhhhhhc-ccc-ccchhHHHHHHHHHH---H---HhhcCc-------CCCCHHHHHHHhccchHHHHH
Confidence 66788999988 888 999999999998882 2 333232 389999999999999999999
Q ss_pred HHhhccccccCCCChhHHHHHHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchh
Q 002206 462 SLVELDIIKDSDRTPEKRQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQ 541 (953)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~ 541 (953)
++..+....... ..-.+++++......+.|+.+....++|+|.+ |.-.||. .|.+...+.|.+....+-+...
T Consensus 341 ~~~T~~~v~~~~--~k~~~rakHv~sea~rv~q~~~~~~~a~~~~d--~~~~~~g---~LmneS~~Sc~~~yEcscpel~ 413 (489)
T KOG0631|consen 341 SLLTLAAVDLQV--KKLYQRAKHVYSEALRVLQEEKLCARAPGRAD--GFLADFG---RLMNESHRSCDVLYECSCPELD 413 (489)
T ss_pred HhccccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCccchh--hhHHHHH---HHhhhhhHHHHHHHhcCCHhHH
Confidence 999988776554 22235577777778888888889999999999 7777776 8889999999999999988999
Q ss_pred hhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCceeccCCccccC-CCCcchHhhhcccCCCCCCchHHHHHHHHHH
Q 002206 542 RLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMDLSDFMDE-GKPMSYEKAKKYFDTNPSQKWAAYVAGTILV 619 (953)
Q Consensus 542 ~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~ 619 (953)
+||++.+++.... +.+.....+....+..+ .|..+.... ..++.|+|+..+|.+++...|.-+.++++-.
T Consensus 414 qL~kiala~g~~g-----aRlTGaGwGGc~v~lvp---~d~~~~~~~~~~~~~Y~ka~~~~~~~~~k~~~~~skp~~g~ 484 (489)
T KOG0631|consen 414 QLCKIALANGGVG-----ARLTGAGWGGCTVALVP---ADLVDFAVAALKEIYYEKAYPKFAQDELKKALIVSKPAAGV 484 (489)
T ss_pred HHHHHHHhcCCcc-----ceeeccccccceeeecc---ccchHHHHHhhhhhhhccccchhhhchhhceEEEecCchhh
Confidence 9999998754332 44544443322222211 121111111 2356677777777766666666666555443
No 95
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism]
Probab=99.05 E-value=1.1e-08 Score=112.30 Aligned_cols=106 Identities=18% Similarity=0.190 Sum_probs=74.5
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHH----HHHHHHHHhhccccCCCCCccchhhhhccCcceE
Q 002206 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPR----DLALLCQKVENHIVGAPCGVMDQMASACGEANKL 705 (953)
Q Consensus 630 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~----~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~ 705 (953)
.||+|..+|++|-|+|||.|+-+++..++|+..+.|.....+ .+.......|.+ .-+.+|.+||.-.++-|..+-
T Consensus 690 ~GfeihT~SdLPHGSGLGTSSIlA~TaLaAi~~aagr~~gTeaLiHailHtvlrlEQi-lTTGGGWQDQ~G~im~GIK~g 768 (948)
T KOG4644|consen 690 CGFEIHTSSDLPHGSGLGTSSILACTALAAICAAAGRADGTEALIHAILHTVLRLEQI-LTTGGGWQDQCGAIMEGIKKG 768 (948)
T ss_pred CceEeeccccCCCCCCcchHHHHHHHHHHHHHHhhccccchhHhHHHHHHHHHHHHHH-hhcCCchhhhccchhhhhhhc
Confidence 699999999999999999999999998999988888754433 344445567864 578889999998888774331
Q ss_pred EEEeecCccc-eeeeecCC------CeEEEEEeCCCcc
Q 002206 706 LAMVCQPAEL-LGVVEIPS------HIRFWGIDSGIRH 736 (953)
Q Consensus 706 ~~~~~~~~~~-~~~~~~p~------~~~~vl~dsgv~~ 736 (953)
-..--.+..+ .+.+.+|+ +-++++++||..|
T Consensus 769 r~rael~~~ie~eeiTipe~f~ekL~dhLLLVYTGKTR 806 (948)
T KOG4644|consen 769 RCRAELNHGIEHEEITIPEEFREKLEDHLLLVYTGKTR 806 (948)
T ss_pred cchhhccCCceeeeecCCHHHHHHHhhcEEEEEeCchH
Confidence 1110112221 24566663 3468888888554
No 96
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.03 E-value=4.7e-08 Score=110.25 Aligned_cols=297 Identities=20% Similarity=0.173 Sum_probs=157.4
Q ss_pred cCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhcc
Q 002206 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (953)
Q Consensus 23 ~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (953)
+....|+..+...++++|.++||+|++++........... ...+.. . ..... ........
T Consensus 10 ~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~---~~~~~~-------~-----~~~~~-~~~~~~~~---- 69 (374)
T cd03817 10 LPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEE---VVVVRP-------F-----RVPTF-KYPDFRLP---- 69 (374)
T ss_pred cCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccc---cccccc-------c-----ccccc-hhhhhhcc----
Confidence 3445689999999999999999999999875322111100 000000 0 00000 00000000
Q ss_pred HHHHHHHHHHHHHcCCCcEEEECCCc----hHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHH--HHHhhcc
Q 002206 103 RKSILKDEVEWLNSIKADLVVSDVVP----VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW--QIAEDYS 176 (953)
Q Consensus 103 ~~~~~~~~~~~L~~~kpDlVV~D~~~----~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ 176 (953)
. .........++..+||+|++...+ .+..++...++|+|...+..+.... .+............. .....+.
T Consensus 70 ~-~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 147 (374)
T cd03817 70 L-PIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYT-HYVPLGRLLARAVVRRKLSRRFYN 147 (374)
T ss_pred c-cHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHH-HHHhcccchhHHHHHHHHHHHHhh
Confidence 0 011122335677899999987532 2345567789998876443332111 111110000011111 1112333
Q ss_pred ccceEEecCCCC-------CCCCCCceeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHH---h
Q 002206 177 HCEFLIRLPGYC-------PMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKE---E 242 (953)
Q Consensus 177 ~~~~l~~~~~~~-------~~p~~~~v~~vg~~~~~-~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~---~ 242 (953)
.++.++..+... ..+....+++.|..... ....++..++.++.. +++.+++..|+.... . .++. .
T Consensus 148 ~~d~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~ 226 (374)
T cd03817 148 RCDAVIAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIP-EDEPVLLYVGRLAKEKNIDFLIRAFAR 226 (374)
T ss_pred hCCEEEeccHHHHHHHHhcCCCCceEEcCCccchhccCccchhHHHHhcCCC-CCCeEEEEEeeeecccCHHHHHHHHHH
Confidence 455444322100 00110112222222111 112223334445544 345567777876542 2 2232 2
Q ss_pred hCC--CCcEEEEeCCCCC-----------CCCCCeEECCCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEE
Q 002206 243 YLP--SGWKCLVCGASDS-----------QLPPNFIKLPKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFV 303 (953)
Q Consensus 243 ll~--~~~~~vv~G~~~~-----------~lp~NV~v~~~~~--~~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l 303 (953)
+.. +++.++++|.... .+.+|+.++++.+ .++++|+.+|++|... ...++.||+++|+|+|
T Consensus 227 ~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI 306 (374)
T cd03817 227 LLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVV 306 (374)
T ss_pred HHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEE
Confidence 221 4567888876531 1467899988863 4668999999999543 3368999999999999
Q ss_pred EEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 304 FVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 304 ~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
+.+.+. .+..+...+.|..++..+. ++.++|.++++++.
T Consensus 307 ~~~~~~------~~~~i~~~~~g~~~~~~~~---~~~~~i~~l~~~~~ 345 (374)
T cd03817 307 AVDAPG------LPDLVADGENGFLFPPGDE---ALAEALLRLLQDPE 345 (374)
T ss_pred EeCCCC------hhhheecCceeEEeCCCCH---HHHHHHHHHHhChH
Confidence 987443 2345666678888876553 78999999998774
No 97
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.02 E-value=5.5e-08 Score=109.27 Aligned_cols=122 Identities=18% Similarity=0.071 Sum_probs=85.6
Q ss_pred CCcEEEEEcCCCCch--Hh-HHH---hhCCCCcEEEEeCCCCCC--------CCCCeEECCCC--CCHHHHHhhcCEEEe
Q 002206 222 DVKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ--------LPPNFIKLPKD--AYTPDFMAASDCMLG 285 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~~-ll~---~ll~~~~~~vv~G~~~~~--------lp~NV~v~~~~--~~~pdlLa~aDlfIt 285 (953)
+.+.+++..|+.... .. +++ .+..+++.++++|..... ..+|+.+.++. +.++++|+.+|++|.
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ 268 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVV 268 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 445677778876552 22 222 222246788888876532 24789988887 345689999999994
Q ss_pred c-----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 286 K-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 286 h-----gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
. +...++.||+++|+|+|+.+.+ .+.+.+...+.|..+...| .+++.++|.++++++.
T Consensus 269 ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~------~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~ 331 (359)
T cd03823 269 PSIWPENFPLVIREALAAGVPVIASDIG------GMAELVRDGVNGLLFPPGD--AEDLAAALERLIDDPD 331 (359)
T ss_pred cCcccCCCChHHHHHHHCCCCEEECCCC------CHHHHhcCCCcEEEECCCC--HHHHHHHHHHHHhChH
Confidence 2 2334899999999999997743 2345566666898888766 4789999999998663
No 98
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase
Probab=99.02 E-value=2.9e-08 Score=109.18 Aligned_cols=81 Identities=21% Similarity=0.249 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
.+.+..++..+.+..+.. .+++|.+.++||.++|||||||..+|++.|++.+++.+++++++.+++.++| |..|
T Consensus 66 ~~~v~~~l~~~~~~~~~~--~~v~I~~~n~iP~~aGLgSSAA~~aA~~~Al~~l~~l~l~~~eL~~lA~~gs----Gsa~ 139 (305)
T TIGR01240 66 NEKTSNCLDDFRQLRKEQ--EKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLPLDTSELSRIARKGS----GSAC 139 (305)
T ss_pred hHHHHHHHHHHHHhcCCC--CceEEEEecCCCCCCccchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhc----CCee
Confidence 445566666554444543 5899999999999999999999999999999999999999999999999886 4444
Q ss_pred CccchhhhhccCc
Q 002206 690 GVMDQMASACGEA 702 (953)
Q Consensus 690 G~~D~~~~~~Gg~ 702 (953)
+ |++||.
T Consensus 140 ~------s~~GG~ 146 (305)
T TIGR01240 140 R------SLFGGY 146 (305)
T ss_pred e------eeecCe
Confidence 4 889995
No 99
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism]
Probab=99.00 E-value=3e-08 Score=106.07 Aligned_cols=113 Identities=21% Similarity=0.255 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCC
Q 002206 611 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCG 690 (953)
Q Consensus 611 ~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG 690 (953)
|.+..+...+.++.+.. .|++|.|+.+||+|+|||+=||=+.+++.+|+++++.+++.+||++++.+. |
T Consensus 67 NLv~rAa~ll~~~~~~~--~~v~I~l~K~IPv~aGLGGGSSdAAa~L~~Ln~lw~~~ls~~eL~~Lg~~L-----G---- 135 (289)
T COG1947 67 NLVYRAAELLRKRTGIA--GGVSIHLDKNIPVGAGLGGGSSDAAAVLVALNELWGLGLSLEELAELGLRL-----G---- 135 (289)
T ss_pred hHHHHHHHHHHHHhCCC--CCeeEEEEecCcccCcCccchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh-----C----
Confidence 77777766666667733 689999999999999999888889999999999999999999999998864 2
Q ss_pred ccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccC
Q 002206 691 VMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 691 ~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~ 739 (953)
.|.-.+++|+. + +...+. +..++++-++...++++..++.-+|.
T Consensus 136 -aDVPffl~g~t--A-~a~G~G-E~l~~~~~~~~~~~vl~~P~v~vsT~ 179 (289)
T COG1947 136 -ADVPFFLSGGT--A-FAEGRG-EKLEPLEDPPEKWYVLAKPGVGVSTK 179 (289)
T ss_pred -CCcCeeeeCCc--e-EEEEcc-ceeeECCCCCCceEEEEeCCCCCChH
Confidence 37777888884 2 233332 33355553456778888877666653
No 100
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.99 E-value=8.5e-08 Score=111.57 Aligned_cols=119 Identities=14% Similarity=0.181 Sum_probs=79.5
Q ss_pred CCCcEEEEEcCCCCch--H-hHHHh---hC--------CCCcEEEEeCCCCCC---------CC-CCeEEC-CCC--CCH
Q 002206 221 DDVKLLILNFGGQPAG--W-KLKEE---YL--------PSGWKCLVCGASDSQ---------LP-PNFIKL-PKD--AYT 273 (953)
Q Consensus 221 ~~~~vVlvs~Gs~~~~--~-~ll~~---ll--------~~~~~~vv~G~~~~~---------lp-~NV~v~-~~~--~~~ 273 (953)
++++.++++.|..... . .++++ +. .+++.+++.|..... +. +|+.++ ++. +.+
T Consensus 229 ~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~ 308 (415)
T cd03816 229 EERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDY 308 (415)
T ss_pred CCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHH
Confidence 3455677777876652 2 23332 21 135788888865421 11 466654 454 357
Q ss_pred HHHHhhcCEEEe----cCC---hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 274 PDFMAASDCMLG----KIG---YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 274 pdlLa~aDlfIt----hgG---~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
|++|+.+|++|. ..| .+++.||+++|+|+|+...+ ...+.+++.+.|+.+. +++.+.++|.++
T Consensus 309 ~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~------~~~eiv~~~~~G~lv~----d~~~la~~i~~l 378 (415)
T cd03816 309 PKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK------CIDELVKHGENGLVFG----DSEELAEQLIDL 378 (415)
T ss_pred HHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC------CHHHHhcCCCCEEEEC----CHHHHHHHHHHH
Confidence 799999999994 112 34799999999999997632 2345577777888873 468999999999
Q ss_pred HhC
Q 002206 347 ISL 349 (953)
Q Consensus 347 l~~ 349 (953)
+++
T Consensus 379 l~~ 381 (415)
T cd03816 379 LSN 381 (415)
T ss_pred Hhc
Confidence 987
No 101
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.98 E-value=1.6e-07 Score=104.91 Aligned_cols=121 Identities=17% Similarity=0.081 Sum_probs=86.2
Q ss_pred CCcEEEEEcCCCCch--H-hHHH---hhC--CCCcEEEEeCCCCCC------------CCCCeEECCCCCCHHHHHhhcC
Q 002206 222 DVKLLILNFGGQPAG--W-KLKE---EYL--PSGWKCLVCGASDSQ------------LPPNFIKLPKDAYTPDFMAASD 281 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~---~ll--~~~~~~vv~G~~~~~------------lp~NV~v~~~~~~~pdlLa~aD 281 (953)
+.+.+++..|+.... . .+++ .+. .+++.++++|..... ...+|.+.++.+.++++|+.+|
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 265 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAAD 265 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhcc
Confidence 345677888876552 2 2222 232 256788888765421 2467888888777889999999
Q ss_pred EEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 282 CMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 282 lfIthgG----~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++|.... .+++.||+++|+|+|+.+.+... +.++..+.|..++..+ ++.|.++|.+++.++
T Consensus 266 i~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~------~~i~~~~~g~~~~~~~--~~~~~~~i~~l~~~~ 330 (359)
T cd03808 266 VFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCR------EAVIDGVNGFLVPPGD--AEALADAIERLIEDP 330 (359)
T ss_pred EEEecCcccCcchHHHHHHHcCCCEEEecCCCch------hhhhcCcceEEECCCC--HHHHHHHHHHHHhCH
Confidence 9997542 46899999999999998754433 3466677888887655 468999999988766
No 102
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.98 E-value=9.1e-08 Score=108.33 Aligned_cols=122 Identities=18% Similarity=0.117 Sum_probs=82.5
Q ss_pred CCcEEEEEcCCCCch--H-hHHH---hhCC-CCcEEEEeCCCCCC----------CCCCeEECCCCC--CHHHHHhhcCE
Q 002206 222 DVKLLILNFGGQPAG--W-KLKE---EYLP-SGWKCLVCGASDSQ----------LPPNFIKLPKDA--YTPDFMAASDC 282 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~---~ll~-~~~~~vv~G~~~~~----------lp~NV~v~~~~~--~~pdlLa~aDl 282 (953)
..+.++++.|+.... . .+++ .+.. +++.++++|..... ..+|+.++++.+ .+.++|+.+|+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di 297 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV 297 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe
Confidence 445677778877652 2 2222 2222 36778888865421 247899888763 45689999999
Q ss_pred EEecCC---------hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 283 MLGKIG---------YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 283 fIthgG---------~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
+|.... .+++.||+++|+|+|+.+.+...|. +...+.|..++..+ .+++.++|.+++.++.
T Consensus 298 ~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~------~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 298 GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL------VEEAGAGLVVPPGD--PEALAAAILELLDDPE 367 (394)
T ss_pred eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh------hccCCcceEeCCCC--HHHHHHHHHHHHhChH
Confidence 995322 2347999999999999986544332 44447788887665 4689999999997663
No 103
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.96 E-value=8.7e-08 Score=108.62 Aligned_cols=134 Identities=23% Similarity=0.218 Sum_probs=89.0
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCC---chH-hHHHh---hCC---CCcEEEEeCCCCCC----CCCCeEECCCCCC--
Q 002206 209 SRKEVRKELGIEDDVKLLILNFGGQP---AGW-KLKEE---YLP---SGWKCLVCGASDSQ----LPPNFIKLPKDAY-- 272 (953)
Q Consensus 209 ~~~e~~~~l~~~~~~~vVlvs~Gs~~---~~~-~ll~~---ll~---~~~~~vv~G~~~~~----lp~NV~v~~~~~~-- 272 (953)
.+...++.++.++++.++++...+.. .+. .+++. +.. +++.++++|..... +..++..+++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~~~~~~v~~~g~~~~~~ 256 (365)
T cd03825 177 DKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDLPFPVHYLGSLNDDE 256 (365)
T ss_pred cHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhccCCCceEecCCcCCHH
Confidence 34556777777655555544333222 222 23332 222 45677888876432 4567888888763
Q ss_pred -HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHH
Q 002206 273 -TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 273 -~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll 347 (953)
++++|+.+|++|... ..+++.||+++|+|+|+...+...|. +...+.|..++..+ .+.|.++|.+++
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~------~~~~~~g~~~~~~~--~~~~~~~l~~l~ 328 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDI------VDHGVTGYLAKPGD--PEDLAEGIEWLL 328 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhh------eeCCCceEEeCCCC--HHHHHHHHHHHH
Confidence 568899999999854 24789999999999999876554443 44455777777554 468999999999
Q ss_pred hCC
Q 002206 348 SLK 350 (953)
Q Consensus 348 ~~~ 350 (953)
+++
T Consensus 329 ~~~ 331 (365)
T cd03825 329 ADP 331 (365)
T ss_pred hCH
Confidence 766
No 104
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.92 E-value=1.4e-07 Score=104.87 Aligned_cols=120 Identities=18% Similarity=0.139 Sum_probs=83.0
Q ss_pred CcEEEEEcCCCCch--H-hHHH---hhC--CCCcEEEEeCCCCCC-----------CCCCeEECCCCCCHHHHHhhcCEE
Q 002206 223 VKLLILNFGGQPAG--W-KLKE---EYL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~--~-~ll~---~ll--~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~~~pdlLa~aDlf 283 (953)
.+.++++.|+.... . .+++ .+. .+++.++++|..... ++.++.+.++.+.++++|+.||++
T Consensus 177 ~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~ 256 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIF 256 (348)
T ss_pred CCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEE
Confidence 34566677766542 2 2222 232 356778888765421 467888888777788999999999
Q ss_pred EecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcC-cEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 284 LGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQ-GGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 284 IthgG----~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G-~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
|.... .+++.||+++|+|+|+.+.....+ .+...+ .|..++..+ .+.+.++|.++++++
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~------~~~~~~~~g~~~~~~~--~~~~~~~i~~ll~~~ 320 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS------EIIEDGVNGLLVPNGD--VEALAEALLRLMEDE 320 (348)
T ss_pred EeCccccccCHHHHHHHHcCCCEEEecCCCchH------hhhccCcceEEeCCCC--HHHHHHHHHHHHcCH
Confidence 97652 368999999999999987433222 244455 888887665 468999999999876
No 105
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.90 E-value=4.1e-07 Score=102.90 Aligned_cols=129 Identities=19% Similarity=0.226 Sum_probs=86.2
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCc--h-HhHHHh---hCC--CCcEEEEeCCCCC-----------CCCCCeEECCCCC
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQPA--G-WKLKEE---YLP--SGWKCLVCGASDS-----------QLPPNFIKLPKDA 271 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~~--~-~~ll~~---ll~--~~~~~vv~G~~~~-----------~lp~NV~v~~~~~ 271 (953)
..+++.+++++ .+.++++.|+... + ..+++. +.. +++.++++|.... .+.+|+.+.++..
T Consensus 176 ~~~~~~~~~~~-~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~ 254 (360)
T cd04951 176 LKIRNALGVKN-DTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRD 254 (360)
T ss_pred HHHHHHcCcCC-CCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccc
Confidence 34566677653 4456777776654 2 223332 221 4678888876541 1457899999888
Q ss_pred CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHH
Q 002206 272 YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 272 ~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll 347 (953)
.++++|+.+|++|.... .+++.||+++|+|+|+...+. +.+.++. .|..+...+ .+.+.++|.+++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~------~~e~i~~--~g~~~~~~~--~~~~~~~i~~ll 324 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGG------VREVVGD--SGLIVPISD--PEALANKIDEIL 324 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCC------hhhEecC--CceEeCCCC--HHHHHHHHHHHH
Confidence 89999999999997542 468999999999999976433 2334544 344555544 568999999998
Q ss_pred hCC
Q 002206 348 SLK 350 (953)
Q Consensus 348 ~~~ 350 (953)
++.
T Consensus 325 ~~~ 327 (360)
T cd04951 325 KMS 327 (360)
T ss_pred hCC
Confidence 544
No 106
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.90 E-value=4e-07 Score=102.92 Aligned_cols=127 Identities=17% Similarity=0.113 Sum_probs=86.0
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCch--H-hHHH---hhCC--CCcEEEEeCCCCC---------------CCCCCeEECCC
Q 002206 213 VRKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYLP--SGWKCLVCGASDS---------------QLPPNFIKLPK 269 (953)
Q Consensus 213 ~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~---~ll~--~~~~~vv~G~~~~---------------~lp~NV~v~~~ 269 (953)
+++.++.+ +...++++.|+.... . .+++ .+.. +++.+++.|.... .+.+||+++++
T Consensus 175 ~~~~~~~~-~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~ 253 (355)
T cd03819 175 LAREWPLP-KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH 253 (355)
T ss_pred HHHHcCCC-CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC
Confidence 45555554 445667777876542 2 2222 2322 5678888876532 13578999998
Q ss_pred CCCHHHHHhhcCEEEecC----C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHH
Q 002206 270 DAYTPDFMAASDCMLGKI----G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (953)
Q Consensus 270 ~~~~pdlLa~aDlfIthg----G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~ 344 (953)
.+.++++|+.+|++|.-. | .++++||+++|+|+|+...+. ..+.+...+.|..++..+ .+.+.++|.
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~------~~e~i~~~~~g~~~~~~~--~~~l~~~i~ 325 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG------ARETVRPGETGLLVPPGD--AEALAQALD 325 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC------cHHHHhCCCceEEeCCCC--HHHHHHHHH
Confidence 778889999999999644 2 369999999999999976432 233455556788887665 468888887
Q ss_pred HHHh
Q 002206 345 RAIS 348 (953)
Q Consensus 345 ~ll~ 348 (953)
.++.
T Consensus 326 ~~~~ 329 (355)
T cd03819 326 QILS 329 (355)
T ss_pred HHHh
Confidence 6654
No 107
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.89 E-value=1.3e-06 Score=97.10 Aligned_cols=307 Identities=17% Similarity=0.148 Sum_probs=159.7
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (953)
|+|++-+..+ -|+.....++++|.++||+|.+.+.... ...+.+..-++++..+ |-. .... ...+
T Consensus 1 MkIwiDi~~p--~hvhfFk~~I~eL~~~GheV~it~R~~~-~~~~LL~~yg~~y~~i----G~~-----g~~~---~~Kl 65 (335)
T PF04007_consen 1 MKIWIDITHP--AHVHFFKNIIRELEKRGHEVLITARDKD-ETEELLDLYGIDYIVI----GKH-----GDSL---YGKL 65 (335)
T ss_pred CeEEEECCCc--hHHHHHHHHHHHHHhCCCEEEEEEeccc-hHHHHHHHcCCCeEEE----cCC-----CCCH---HHHH
Confidence 4565566555 5999999999999999999999876431 1111111112222221 111 0111 1112
Q ss_pred HHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhhc
Q 002206 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDY 175 (953)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (953)
.... ....+..+.+++++||++|+..++.+..+|..+|+|+|.+.+..+...... -.+
T Consensus 66 ~~~~-----~R~~~l~~~~~~~~pDv~is~~s~~a~~va~~lgiP~I~f~D~e~a~~~~~-----------------Lt~ 123 (335)
T PF04007_consen 66 LESI-----ERQYKLLKLIKKFKPDVAISFGSPEAARVAFGLGIPSIVFNDTEHAIAQNR-----------------LTL 123 (335)
T ss_pred HHHH-----HHHHHHHHHHHhhCCCEEEecCcHHHHHHHHHhCCCeEEEecCchhhccce-----------------eeh
Confidence 1111 122334667788999999999888888899999999999976442211000 011
Q ss_pred cccceEEecCCCCCCC---CC---CceeecCccc-----ccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--------
Q 002206 176 SHCEFLIRLPGYCPMP---AF---RDVIDVPLVV-----RRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG-------- 236 (953)
Q Consensus 176 ~~~~~l~~~~~~~~~p---~~---~~v~~vg~~~-----~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-------- 236 (953)
+-++.++. |...+.. .+ .+++..++.. .+..++ +++.+.+|++ +.+.|++=+-+..+.
T Consensus 124 Pla~~i~~-P~~~~~~~~~~~G~~~~i~~y~G~~E~ayl~~F~Pd-~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i 200 (335)
T PF04007_consen 124 PLADVIIT-PEAIPKEFLKRFGAKNQIRTYNGYKELAYLHPFKPD-PEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSI 200 (335)
T ss_pred hcCCeeEC-CcccCHHHHHhcCCcCCEEEECCeeeEEeecCCCCC-hhHHHHcCCC-CCCEEEEEeccccCeeecCccch
Confidence 11222221 1111000 00 1233222211 112333 4677788876 568888877665441
Q ss_pred -HhHHHhhCCCCcEEEEeCCCCCC--CCC--CeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCC
Q 002206 237 -WKLKEEYLPSGWKCLVCGASDSQ--LPP--NFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFN 311 (953)
Q Consensus 237 -~~ll~~ll~~~~~~vv~G~~~~~--lp~--NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~ 311 (953)
.++.+.+...+..++++.+...+ +-+ ++.+.+..-...++|..||+|||-|| +...||+.+|+|.|.+- ++
T Consensus 201 ~~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~~~~i~~~~vd~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~~-~g-- 276 (335)
T PF04007_consen 201 LPEIIEELEKYGRNVVIIPRYEDQRELFEKYGVIIPPEPVDGLDLLYYADLVIGGGG-TMAREAALLGTPAISCF-PG-- 276 (335)
T ss_pred HHHHHHHHHhhCceEEEecCCcchhhHHhccCccccCCCCCHHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEec-CC--
Confidence 12333333333323333222211 111 23333221123389999999999655 88999999999999862 12
Q ss_pred chHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc--CCCCHHHHHHHHHHHH
Q 002206 312 EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE--GGINGGEVAAHILQET 370 (953)
Q Consensus 312 DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~--~~~~g~~~~A~~i~~~ 370 (953)
+-...=+++.+.|. .....+ ++++...+.+.+....... ...+-...+.+.|+++
T Consensus 277 ~~~~vd~~L~~~Gl--l~~~~~--~~ei~~~v~~~~~~~~~~~~~~~~d~~~~i~~~i~~~ 333 (335)
T PF04007_consen 277 KLLAVDKYLIEKGL--LYHSTD--PDEIVEYVRKNLGKRKKIREKKSEDPTDLIIEEIEEY 333 (335)
T ss_pred cchhHHHHHHHCCC--eEecCC--HHHHHHHHHHhhhcccchhhhhccCHHHHHHHHHHHh
Confidence 22233367778876 344334 3455556655544332111 1244444555555554
No 108
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.88 E-value=1e-06 Score=102.35 Aligned_cols=131 Identities=19% Similarity=0.224 Sum_probs=86.4
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHh---hC-CCCcEEEEeCCCCCC---------C-CCCeEECCCCC--
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL-PSGWKCLVCGASDSQ---------L-PPNFIKLPKDA-- 271 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~---ll-~~~~~~vv~G~~~~~---------l-p~NV~v~~~~~-- 271 (953)
..+++.++++ +.+.++++.|+.... . .++++ +. .+++.++++|..... + .+||+++++++
T Consensus 217 ~~~~~~~~~~-~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~ 295 (412)
T PRK10307 217 DALRAQLGLP-DGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYD 295 (412)
T ss_pred HHHHHHcCCC-CCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHH
Confidence 4567777775 344567778877653 2 23332 21 245788888865411 1 24899888764
Q ss_pred CHHHHHhhcCEEEec---CC-----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 002206 272 YTPDFMAASDCMLGK---IG-----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (953)
Q Consensus 272 ~~pdlLa~aDlfIth---gG-----~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al 343 (953)
.++++|+.+|++|.. .+ .+.+.|++++|+|+|+.+.++ .+ ..+.+. +.|+.++..+ ++.|.++|
T Consensus 296 ~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g-~~---~~~~i~--~~G~~~~~~d--~~~la~~i 367 (412)
T PRK10307 296 RLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPG-TE---LGQLVE--GIGVCVEPES--VEALVAAI 367 (412)
T ss_pred HHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCC-ch---HHHHHh--CCcEEeCCCC--HHHHHHHH
Confidence 467899999998742 12 124789999999999987433 11 122333 6788888766 46899999
Q ss_pred HHHHhCC
Q 002206 344 ERAISLK 350 (953)
Q Consensus 344 ~~ll~~~ 350 (953)
.++++++
T Consensus 368 ~~l~~~~ 374 (412)
T PRK10307 368 AALARQA 374 (412)
T ss_pred HHHHhCH
Confidence 9998766
No 109
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.88 E-value=3.3e-07 Score=103.71 Aligned_cols=130 Identities=23% Similarity=0.166 Sum_probs=88.2
Q ss_pred HHHhCCCCCCcEEEEEcCCCCch--Hh-HHH---hhC--CCCcEEEEeCCCCC-----------CCCCCeEECCCCCCHH
Q 002206 214 RKELGIEDDVKLLILNFGGQPAG--WK-LKE---EYL--PSGWKCLVCGASDS-----------QLPPNFIKLPKDAYTP 274 (953)
Q Consensus 214 ~~~l~~~~~~~vVlvs~Gs~~~~--~~-ll~---~ll--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~p 274 (953)
++..... +.+.++++.|+.... .. +++ .+. .+++.++++|.... .++++|+..++.+.++
T Consensus 183 ~~~~~~~-~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 261 (358)
T cd03812 183 RRELGIL-EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVP 261 (358)
T ss_pred HHHcCCC-CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHH
Confidence 3444443 445677788877652 22 222 222 25678888886542 1467899999877888
Q ss_pred HHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 275 DFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 275 dlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++++.||++|... -.++++|||++|+|+|+...++..| .++. +.+......+ ++.|.++|.++++++
T Consensus 262 ~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~------~i~~-~~~~~~~~~~--~~~~a~~i~~l~~~~ 332 (358)
T cd03812 262 ELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEV------DLTD-LVKFLSLDES--PEIWAEEILKLKSED 332 (358)
T ss_pred HHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhh------hhcc-CccEEeCCCC--HHHHHHHHHHHHhCc
Confidence 9999999999642 3468999999999999987554333 3444 5555544333 589999999999988
Q ss_pred CCc
Q 002206 351 PCY 353 (953)
Q Consensus 351 ~~~ 353 (953)
...
T Consensus 333 ~~~ 335 (358)
T cd03812 333 RRE 335 (358)
T ss_pred chh
Confidence 543
No 110
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.87 E-value=5.7e-07 Score=100.87 Aligned_cols=129 Identities=19% Similarity=0.179 Sum_probs=88.0
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCC----------C--CCCCeEECCCC
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS----------Q--LPPNFIKLPKD 270 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~----------~--lp~NV~v~~~~ 270 (953)
...++.++.+ +.+.+++++|+.... . .+++. +. .+++.++++|.... . ++.++.+.+..
T Consensus 181 ~~~~~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~ 259 (365)
T cd03807 181 ARLREELGLP-EDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER 259 (365)
T ss_pred HHHHHhcCCC-CCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc
Confidence 3455667765 345567788876652 2 23332 21 24677888886532 1 45688888877
Q ss_pred CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 271 AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 271 ~~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
..++++|+.+|++|.... .+++.||+++|+|+|+.+.+. +.+.+.+ .|..+...+ .+.+.++|.++
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~------~~e~~~~--~g~~~~~~~--~~~l~~~i~~l 329 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGD------NAELVGD--TGFLVPPGD--PEALAEAIEAL 329 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCC------hHHHhhc--CCEEeCCCC--HHHHHHHHHHH
Confidence 788899999999997543 368999999999999976433 2333444 566666555 57899999999
Q ss_pred HhCC
Q 002206 347 ISLK 350 (953)
Q Consensus 347 l~~~ 350 (953)
++++
T Consensus 330 ~~~~ 333 (365)
T cd03807 330 LADP 333 (365)
T ss_pred HhCh
Confidence 9876
No 111
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.87 E-value=4.8e-07 Score=103.57 Aligned_cols=294 Identities=16% Similarity=0.106 Sum_probs=155.2
Q ss_pred EEEEEEecCCCcchH-HHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHH
Q 002206 16 LVFAYYVTGHGFGHA-TRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEK 94 (953)
Q Consensus 16 l~il~~v~~~G~GH~-~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 94 (953)
.+|+++++..+.|.. .....+++.|.++||++++++......+...+....+.+... . . . ... .
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~----~--~-~--~~~------~ 66 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYAL----H--K-Q--PGK------D 66 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEe----C--C-C--CCC------C
Confidence 456667777765555 556699999999999998887432211111111111122110 0 0 0 000 0
Q ss_pred HHHHhhccHHHHHHHHHHHHHcCCCcEEEECC--CchHHHHHHHhCCcEEEEecCChhHH--HHHHHhhhccchHHHHHH
Q 002206 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDV--VPVACRAAADAGIRSVCVTNFSWDFI--YAEYVMAAGHHHRSIVWQ 170 (953)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~--~~~~~~~A~~~giP~I~is~~~~~~~--~~~~~~~~~~~~~~~~~~ 170 (953)
+. ......+++++.+||+|.+.. ...+..++...++|...++..++... ...... .. ....
T Consensus 67 ~~---------~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~-----~~-~~~~ 131 (374)
T TIGR03088 67 VA---------VYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNWK-----YR-WLRR 131 (374)
T ss_pred hH---------HHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccchhhHHH-----HH-HHHH
Confidence 00 112234567888999999875 22334556777899755543332100 000000 00 0000
Q ss_pred HHhhccccceEEecCCC--------CCCC-CCCceeecCcccccCCC---ChHHHHHHhCCCCCCcEEEEEcCCCCch--
Q 002206 171 IAEDYSHCEFLIRLPGY--------CPMP-AFRDVIDVPLVVRRLHK---SRKEVRKELGIEDDVKLLILNFGGQPAG-- 236 (953)
Q Consensus 171 l~~~~~~~~~l~~~~~~--------~~~p-~~~~v~~vg~~~~~~~~---~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-- 236 (953)
+ .....+.++..+.. ...+ ....+++.|.......+ .+...++.... ++.+.++++.|.....
T Consensus 132 ~--~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~vGrl~~~Kg 208 (374)
T TIGR03088 132 L--YRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFF-ADESVVVGTVGRLQAVKD 208 (374)
T ss_pred H--HHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcC-CCCCeEEEEEecCCcccC
Confidence 0 00111222211100 0011 11123444442221111 11122222222 2456788888877652
Q ss_pred H-hHHHh---hC---C---CCcEEEEeCCCCC-----------CCCCCeEECCCCCCHHHHHhhcCEEEec----CChhH
Q 002206 237 W-KLKEE---YL---P---SGWKCLVCGASDS-----------QLPPNFIKLPKDAYTPDFMAASDCMLGK----IGYGT 291 (953)
Q Consensus 237 ~-~ll~~---ll---~---~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~pdlLa~aDlfIth----gG~~T 291 (953)
. .++++ +. + +++.++++|.... .+..++.+.++...++++|+.+|++|.- |-..+
T Consensus 209 ~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~ 288 (374)
T TIGR03088 209 QPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNT 288 (374)
T ss_pred HHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchH
Confidence 2 22222 21 1 2568888886541 1356788888778889999999999953 23468
Q ss_pred HHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 292 v~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
+.||+++|+|+|+.+.++ +.+.++....|..++..+ ++.|.++|.++++++
T Consensus 289 ~lEAma~G~Pvv~s~~~g------~~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 289 ILEAMASGLPVIATAVGG------NPELVQHGVTGALVPPGD--AVALARALQPYVSDP 339 (374)
T ss_pred HHHHHHcCCCEEEcCCCC------cHHHhcCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 999999999999987543 234455566788887655 468999999998765
No 112
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.84 E-value=1.1e-06 Score=98.36 Aligned_cols=293 Identities=18% Similarity=0.046 Sum_probs=152.1
Q ss_pred CcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccHHH
Q 002206 26 GFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKS 105 (953)
Q Consensus 26 G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (953)
+.|+..+...++++|.+.||+|++++............... . . .... . ..... .... ...
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~-~--~----~~~~--~-~~~~~----~~~~------~~~ 72 (374)
T cd03801 13 VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGI-V--V----VRPP--P-LLRVR----RLLL------LLL 72 (374)
T ss_pred cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCc-c--e----ecCC--c-ccccc----hhHH------HHH
Confidence 36899999999999999999999998764321111000000 0 0 0000 0 00000 0000 001
Q ss_pred HHHHHHHHHHcCCCcEEEECCCchH---HHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhhccccceEE
Q 002206 106 ILKDEVEWLNSIKADLVVSDVVPVA---CRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLI 182 (953)
Q Consensus 106 ~~~~~~~~L~~~kpDlVV~D~~~~~---~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 182 (953)
........++..+||+|+....... ..++...++|+|...+-.+....... ... ............+...+.++
T Consensus 73 ~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~d~~i 149 (374)
T cd03801 73 LALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNE-LGL--LLKLARALERRALRRADRII 149 (374)
T ss_pred HHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccccc-hhH--HHHHHHHHHHHHHHhCCEEE
Confidence 1222345567789999998863322 24567789998876332211100000 000 00000000011222233333
Q ss_pred ecCCC--------CCCC-CCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch---HhHHHh---hCC--
Q 002206 183 RLPGY--------CPMP-AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YLP-- 245 (953)
Q Consensus 183 ~~~~~--------~~~p-~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~---~~ll~~---ll~-- 245 (953)
..+.. ...+ ....+++.|.........+.+.+...... ..+.+++.+|+.... ..+++. +..
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~ 228 (374)
T cd03801 150 AVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIP-EDEPVILFVGRLVPRKGVDLLLEALAKLRKEY 228 (374)
T ss_pred EecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCCc-CCCeEEEEecchhhhcCHHHHHHHHHHHhhhc
Confidence 22110 0111 11112222222111111112222333322 344567777876542 223332 222
Q ss_pred CCcEEEEeCCCCC-----------CCCCCeEECCCC--CCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCC
Q 002206 246 SGWKCLVCGASDS-----------QLPPNFIKLPKD--AYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRD 308 (953)
Q Consensus 246 ~~~~~vv~G~~~~-----------~lp~NV~v~~~~--~~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~l~iP~~ 308 (953)
+++.++++|.... ..++||.+.++. ..+.++|+.||++|.- +..+++.||+++|+|+|+.+.+
T Consensus 229 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~ 308 (374)
T cd03801 229 PDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG 308 (374)
T ss_pred CCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC
Confidence 3577788885431 146789988887 5677999999999953 3456899999999999998754
Q ss_pred CCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 309 ~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
.. .+.++..+.|..++..+ ++++.++|.++++++
T Consensus 309 ~~------~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 342 (374)
T cd03801 309 GI------PEVVEDGETGLLVPPGD--PEALAEAILRLLDDP 342 (374)
T ss_pred Ch------hHHhcCCcceEEeCCCC--HHHHHHHHHHHHcCh
Confidence 33 44466678888887665 578999999998776
No 113
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism]
Probab=98.84 E-value=3.8e-08 Score=101.31 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=62.9
Q ss_pred CCCCchHHHHHHHHH-HHHHHH-hCCCCCH-HHHHHHHHHhhccccC-CCCCccchhhhhccCcceEEEEeecCccc---
Q 002206 643 GKGVSSSASVEVASM-SAIAAA-HGLNIHP-RDLALLCQKVENHIVG-APCGVMDQMASACGEANKLLAMVCQPAEL--- 715 (953)
Q Consensus 643 g~GLgSSAA~~va~~-~al~~~-~~~~l~~-~~l~~~a~~~E~~~~G-~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~--- 715 (953)
..|||||||+++.+. .+++.+ .+.+++. .++-++||.+-..-+| ..|| -|.++++||+ +++=.|.|...
T Consensus 107 KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~eIhklaqiAhc~aQggIGSG-fDiaaA~fGs---iiyrRF~p~li~~l 182 (337)
T COG3890 107 KTGLGSSAAVATSLTCGLFLSHANATNVDEKGEIHKLAQIAHCYAQGGIGSG-FDIAAAIFGS---IIYRRFEPGLIPKL 182 (337)
T ss_pred cCCCcchhHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhCCCCcc-chhhHhhhcc---eEEeecCcchhhhh
Confidence 689999999999998 344433 5556666 7888888877654454 5566 5999999999 45534545432
Q ss_pred --eeeeecCCCeEEEEEeCCCccccC
Q 002206 716 --LGVVEIPSHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 716 --~~~~~~p~~~~~vl~dsgv~~~~~ 739 (953)
.+.+++ .++.++..|.+...+|.
T Consensus 183 ~qig~~nf-g~y~LmmGd~a~gSeTv 207 (337)
T COG3890 183 RQIGAVNF-GDYYLMMGDQAIGSETV 207 (337)
T ss_pred HhhCcccc-cCeeeeecccccCccch
Confidence 122333 36888888887766654
No 114
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.84 E-value=7.2e-07 Score=108.46 Aligned_cols=122 Identities=9% Similarity=-0.004 Sum_probs=86.2
Q ss_pred CcEEEEEcCCCCc--hH-hHHHh---hC--CCCcEEEEeCCCCC-----------CCCCCeEECCCCCCHHHHHhhcCEE
Q 002206 223 VKLLILNFGGQPA--GW-KLKEE---YL--PSGWKCLVCGASDS-----------QLPPNFIKLPKDAYTPDFMAASDCM 283 (953)
Q Consensus 223 ~~vVlvs~Gs~~~--~~-~ll~~---ll--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~pdlLa~aDlf 283 (953)
...++++.|.... +. .+++. +. .+++.++++|.... .+.++|++.++.++++.+|+.+|+|
T Consensus 516 ~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~ 595 (694)
T PRK15179 516 ARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAF 595 (694)
T ss_pred CCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEE
Confidence 3456667776654 22 23332 21 25678888886541 1467899999998899999999999
Q ss_pred Eec---CC-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 284 LGK---IG-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 284 Ith---gG-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
|.- -| .+++.|||++|+|+|+...++ +.+.+.....|+.++..+..++.|.++|.+++.+.
T Consensus 596 VlpS~~Egfp~vlLEAMA~G~PVVat~~gG------~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSGVPVVTTLAGG------AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred EeccccccchHHHHHHHHcCCeEEEECCCC------hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 963 34 358999999999999987433 33445565679999877776678888888887643
No 115
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.80 E-value=1.1e-06 Score=101.70 Aligned_cols=300 Identities=16% Similarity=0.105 Sum_probs=152.6
Q ss_pred cchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccC-CCceeeeeecccCCcccccccccChHHHHHHHHHHhhccHHH
Q 002206 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQ-SPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKS 105 (953)
Q Consensus 27 ~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (953)
.|.-.....++++|.++||+|++++............ .+.+.+... ..+.. . ..... .+..+. ..
T Consensus 20 GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~--~--~~~~~----~~~~~~----~~ 85 (405)
T TIGR03449 20 GGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNV--VAGPY--E--GLDKE----DLPTQL----CA 85 (405)
T ss_pred CCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEe--cCCCc--c--cCCHH----HHHHHH----HH
Confidence 4777888999999999999999998753211111100 122232221 00000 0 00000 011100 00
Q ss_pred HHHHHH-HHHH--cCCCcEEEECC---CchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHH-Hhhcccc
Q 002206 106 ILKDEV-EWLN--SIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AEDYSHC 178 (953)
Q Consensus 106 ~~~~~~-~~L~--~~kpDlVV~D~---~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~ 178 (953)
+..... .+++ ..+||+|.++. ..++..+++..++|+|...+-.+ .....+............... ...+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 164 (405)
T TIGR03449 86 FTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLA-AVKNAALADGDTPEPEARRIGEQQLVDNA 164 (405)
T ss_pred HHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchH-HHHHHhccCCCCCchHHHHHHHHHHHHhc
Confidence 111112 2333 25899999875 23345556778999876532111 111111100000000000000 1122333
Q ss_pred ceEEecCCC--------CCC-CCCCceeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHh---
Q 002206 179 EFLIRLPGY--------CPM-PAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE--- 242 (953)
Q Consensus 179 ~~l~~~~~~--------~~~-p~~~~v~~vg~~~~~-~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~--- 242 (953)
+.++..+.. ... +....+++.|..... ....++..++.+++++ ++.+++++|..... . .+++.
T Consensus 165 d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~l~~~K~~~~li~a~~~ 243 (405)
T TIGR03449 165 DRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPL-DTKVVAFVGRIQPLKAPDVLLRAVAE 243 (405)
T ss_pred CeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCC-CCcEEEEecCCCcccCHHHHHHHHHH
Confidence 433322110 000 111123444443221 1223445667777754 34567778877652 2 23332
Q ss_pred hCC--CC--cEEEEeCCCC----C------------CCCCCeEECCCCC--CHHHHHhhcCEEEec---CCh-hHHHHHH
Q 002206 243 YLP--SG--WKCLVCGASD----S------------QLPPNFIKLPKDA--YTPDFMAASDCMLGK---IGY-GTVSEAL 296 (953)
Q Consensus 243 ll~--~~--~~~vv~G~~~----~------------~lp~NV~v~~~~~--~~pdlLa~aDlfIth---gG~-~Tv~Eal 296 (953)
+.. ++ +.++++|... + .+.+||++.++.+ .++++|+.+|++|.. -|+ .++.||+
T Consensus 244 l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAm 323 (405)
T TIGR03449 244 LLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQ 323 (405)
T ss_pred HHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHH
Confidence 211 33 5677776311 1 1357899988763 456899999999952 233 5899999
Q ss_pred HcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 297 AYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 297 ~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++|+|+|+...++.. +.+.+...|+.++..| .+.+.++|.++++++
T Consensus 324 a~G~Pvi~~~~~~~~------e~i~~~~~g~~~~~~d--~~~la~~i~~~l~~~ 369 (405)
T TIGR03449 324 ACGTPVVAARVGGLP------VAVADGETGLLVDGHD--PADWADALARLLDDP 369 (405)
T ss_pred HcCCCEEEecCCCcH------hhhccCCceEECCCCC--HHHHHHHHHHHHhCH
Confidence 999999998754333 3355666788887655 468999999998765
No 116
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2.7.1.39 from EC), galactokinases (2.7.1.6 from EC) and mevalonate kinases (2.7.1.36 from EC). These kinases make up the GHMP kinase superfamily of ATP-dependent enzymes []. These enzymes are involved in the biosynthesis of isoprenes and amino acids as well as in carbohydrate metabolism. The C-terminal domain of homoserine kinase has a central alpha-beta plait fold and an insertion of four helices, which, together with the N-terminal fold, create a novel nucleotide binding fold [].; PDB: 2R3V_C 4EMD_A 4DXL_A 4ED4_A 2GS8_A 1K47_E 3GON_A 3K17_B 1PIE_A 2AJ4_A ....
Probab=98.79 E-value=6e-09 Score=92.51 Aligned_cols=65 Identities=25% Similarity=0.371 Sum_probs=55.9
Q ss_pred HHHHHccCChHHHHHHHHHHHHhhhh--hhhcCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEec
Q 002206 862 KALLTAAASDDQLTSLGELLYQCHYS--YSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIG 939 (953)
Q Consensus 862 ~~~l~~~~~~~~~~~lG~lm~~sh~s--l~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~ 939 (953)
+++|.++ |++.|+++|+++|.+ ....++.+|+++.+++.+++ .|++|++|||+|||||+++|.
T Consensus 2 ~~al~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~Ga~~~~~sGsG~G~~v~~l~ 66 (85)
T PF08544_consen 2 IKALAEG----DLELLGELMNENQENEPENYREVLTPEIDELKEAAEE-----------NGALGAKMSGSGGGPTVFALC 66 (85)
T ss_dssp HHHHHTT----CHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH-----------TTESEEEEETTSSSSEEEEEE
T ss_pred HHHHHCc----CHHHHHHHHHHhhhhcchHHHHHcCHHHHHHHHHHHH-----------CCCCceecCCCCCCCeEEEEE
Confidence 5677775 999999999999985 33456789999999999987 689999999999999999987
Q ss_pred cC
Q 002206 940 RN 941 (953)
Q Consensus 940 ~~ 941 (953)
++
T Consensus 67 ~~ 68 (85)
T PF08544_consen 67 KD 68 (85)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 117
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.79 E-value=7.8e-07 Score=101.42 Aligned_cols=128 Identities=16% Similarity=0.130 Sum_probs=84.0
Q ss_pred HHHhCCCCCCcEEEEEcCCCCc---h---HhHHHh---hCCCCcEEEEeCCCC--CC-------C---CCCeEECCCC--
Q 002206 214 RKELGIEDDVKLLILNFGGQPA---G---WKLKEE---YLPSGWKCLVCGASD--SQ-------L---PPNFIKLPKD-- 270 (953)
Q Consensus 214 ~~~l~~~~~~~vVlvs~Gs~~~---~---~~ll~~---ll~~~~~~vv~G~~~--~~-------l---p~NV~v~~~~-- 270 (953)
++.++++ ++++|++++|+... . ..++++ +...++.++..|... .. + .+|+++.++.
T Consensus 190 ~~~~~~~-~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 190 LELLGLL-PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred hhhcccC-CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 3456654 56778888887653 1 123333 222235555544332 11 2 4688877653
Q ss_pred CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 271 AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 271 ~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
.+++.+|+.||+||+.+| +.+.|++++|+|+|.++. .++ ...+.+.|+++.+.. ..+.+.++|.++++++
T Consensus 269 ~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~--~~~----~~~~~~~g~~~~~~~---~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 269 LYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRD--RTE----RPETVESGTNVLVGT---DPEAILAAIEKLLSDE 338 (363)
T ss_pred HHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCC--CCc----cchhhheeeEEecCC---CHHHHHHHHHHHhcCc
Confidence 357789999999999999 778899999999999972 222 335667787766642 2578899999999876
Q ss_pred CC
Q 002206 351 PC 352 (953)
Q Consensus 351 ~~ 352 (953)
..
T Consensus 339 ~~ 340 (363)
T cd03786 339 FA 340 (363)
T ss_pred hh
Confidence 43
No 118
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.78 E-value=2.2e-06 Score=98.59 Aligned_cols=120 Identities=12% Similarity=-0.025 Sum_probs=79.9
Q ss_pred CCcEEEEEcCCCCch--H-hHHH---hhCC-----CCcEEEEeCCCCC--------------------CCCCCeEECCCC
Q 002206 222 DVKLLILNFGGQPAG--W-KLKE---EYLP-----SGWKCLVCGASDS--------------------QLPPNFIKLPKD 270 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~---~ll~-----~~~~~vv~G~~~~--------------------~lp~NV~v~~~~ 270 (953)
+...++++.|..... . .+++ .+.. +++.+++.|.... .+.+||++.++.
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~ 288 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSI 288 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 445677788876552 2 2222 2221 4677888875421 134689988887
Q ss_pred CC--HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHH
Q 002206 271 AY--TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (953)
Q Consensus 271 ~~--~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~ 344 (953)
+. ++++|+.+|+++... | ..++.||+++|+|+|+...++.. +.+...+.|..++. .++.+.++|.
T Consensus 289 ~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~------e~i~~~~~g~~~~~---~~~~~a~~i~ 359 (392)
T cd03805 289 SDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPL------ETVVDGETGFLCEP---TPEEFAEAML 359 (392)
T ss_pred ChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcH------HHhccCCceEEeCC---CHHHHHHHHH
Confidence 53 347899999999532 2 25789999999999998744322 33555567877753 3578999999
Q ss_pred HHHhCC
Q 002206 345 RAISLK 350 (953)
Q Consensus 345 ~ll~~~ 350 (953)
++++++
T Consensus 360 ~l~~~~ 365 (392)
T cd03805 360 KLANDP 365 (392)
T ss_pred HHHhCh
Confidence 999876
No 119
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.77 E-value=1.4e-06 Score=99.50 Aligned_cols=148 Identities=15% Similarity=0.093 Sum_probs=89.5
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCC---ch-HhHHHh---hC--CCCcEEEEe-CCCCC---------CCCCCeEECCCCC
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQP---AG-WKLKEE---YL--PSGWKCLVC-GASDS---------QLPPNFIKLPKDA 271 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~---~~-~~ll~~---ll--~~~~~~vv~-G~~~~---------~lp~NV~v~~~~~ 271 (953)
.++++.++. ++++++++++... .+ ..++++ +. .+++.+++. +++.. ...+||++++...
T Consensus 187 ~~~~~~~~~--~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 264 (365)
T TIGR00236 187 SPVLSEFGE--DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLE 264 (365)
T ss_pred hhHHHhcCC--CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCC
Confidence 345555652 4467777765322 11 123332 22 135666665 33221 1246888887665
Q ss_pred CH--HHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 272 YT--PDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 272 ~~--pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
+. +.+|+.+|+||+.+| +.+.||+++|+|+|.++. .++++ .+...|.++.+. . +++.+.++|.+++++
T Consensus 265 ~~~~~~~l~~ad~vv~~Sg-~~~~EA~a~g~PvI~~~~--~~~~~----e~~~~g~~~lv~-~--d~~~i~~ai~~ll~~ 334 (365)
T TIGR00236 265 YLDFLNLAANSHLILTDSG-GVQEEAPSLGKPVLVLRD--TTERP----ETVEAGTNKLVG-T--DKENITKAAKRLLTD 334 (365)
T ss_pred hHHHHHHHHhCCEEEECCh-hHHHHHHHcCCCEEECCC--CCCCh----HHHhcCceEEeC-C--CHHHHHHHHHHHHhC
Confidence 43 378899999999887 457999999999999863 23332 233467776663 2 467889999999877
Q ss_pred CCCcc---------CCCCHHHHHHHHHHHH
Q 002206 350 KPCYE---------GGINGGEVAAHILQET 370 (953)
Q Consensus 350 ~~~~~---------~~~~g~~~~A~~i~~~ 370 (953)
+..+. ..++...++++.|.+|
T Consensus 335 ~~~~~~~~~~~~~~g~~~a~~ri~~~l~~~ 364 (365)
T TIGR00236 335 PDEYKKMSNASNPYGDGEASERIVEELLNH 364 (365)
T ss_pred hHHHHHhhhcCCCCcCchHHHHHHHHHHhh
Confidence 63211 2345556666665543
No 120
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.77 E-value=2.1e-06 Score=96.66 Aligned_cols=126 Identities=21% Similarity=0.218 Sum_probs=84.2
Q ss_pred HHHhCCCCCCcEEEEEcCCCCch--H-hHHH---hhCC--CCcEEEEeCCCCC-------------CCCCCeEECCCCC-
Q 002206 214 RKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYLP--SGWKCLVCGASDS-------------QLPPNFIKLPKDA- 271 (953)
Q Consensus 214 ~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~---~ll~--~~~~~vv~G~~~~-------------~lp~NV~v~~~~~- 271 (953)
++.++.+ +++.+++++|+.... . .+++ .+.. +++.++++|.... .+++||++.++++
T Consensus 194 ~~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 272 (375)
T cd03821 194 RRKFPIL-PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYG 272 (375)
T ss_pred hhhccCC-CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCCh
Confidence 3444443 344567777876542 2 2322 2322 5678888886432 1467899988876
Q ss_pred -CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 272 -YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 272 -~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
.+.++|+.+|++|... | .+++.||+++|+|+|+.+.++. ...+.. +.|...... .+.+.++|.++
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~------~~~~~~-~~~~~~~~~---~~~~~~~i~~l 342 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPW------QELIEY-GCGWVVDDD---VDALAAALRRA 342 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCH------HHHhhc-CceEEeCCC---hHHHHHHHHHH
Confidence 5668999999999643 2 3589999999999999874332 333444 777776543 27889999999
Q ss_pred HhCC
Q 002206 347 ISLK 350 (953)
Q Consensus 347 l~~~ 350 (953)
++++
T Consensus 343 ~~~~ 346 (375)
T cd03821 343 LELP 346 (375)
T ss_pred HhCH
Confidence 9876
No 121
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.76 E-value=6.1e-07 Score=103.17 Aligned_cols=127 Identities=18% Similarity=0.073 Sum_probs=85.0
Q ss_pred HHhCCCCCCcEEEEEcCCCCch---HhHHHh---hC--CCCcEEEEeCCCCC-----------------CCCCCeEECCC
Q 002206 215 KELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS-----------------QLPPNFIKLPK 269 (953)
Q Consensus 215 ~~l~~~~~~~vVlvs~Gs~~~~---~~ll~~---ll--~~~~~~vv~G~~~~-----------------~lp~NV~v~~~ 269 (953)
+.+..+ ....++++.|+.... ..+++. +. .+++.++++|.... .+.+|+.++++
T Consensus 212 ~~~~~~-~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~ 290 (398)
T cd03800 212 ARLLRD-PDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGR 290 (398)
T ss_pred HhhccC-CCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEecc
Confidence 334443 334567777876652 223332 22 24677777765321 13468888888
Q ss_pred CC--CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 002206 270 DA--YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (953)
Q Consensus 270 ~~--~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al 343 (953)
.+ .++.+++.+|+++..+ | ..++.||+++|+|+|+.+.++ +.+.++..+.|..++..+ ++.|.++|
T Consensus 291 ~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~------~~e~i~~~~~g~~~~~~~--~~~l~~~i 362 (398)
T cd03800 291 VSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG------PRDIVVDGVTGLLVDPRD--PEALAAAL 362 (398)
T ss_pred CCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC------HHHHccCCCCeEEeCCCC--HHHHHHHH
Confidence 64 3568899999999542 2 358999999999999876332 445577777899887665 57899999
Q ss_pred HHHHhCC
Q 002206 344 ERAISLK 350 (953)
Q Consensus 344 ~~ll~~~ 350 (953)
.++++++
T Consensus 363 ~~l~~~~ 369 (398)
T cd03800 363 RRLLTDP 369 (398)
T ss_pred HHHHhCH
Confidence 9998765
No 122
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.76 E-value=3.6e-06 Score=93.63 Aligned_cols=120 Identities=17% Similarity=0.055 Sum_probs=80.2
Q ss_pred CCcEEEEEcCCCCch--H-hHHH---hhCC--CCcEEEEeCCCCC-----------CCCCCeEECCCCCCHHHHHhhcCE
Q 002206 222 DVKLLILNFGGQPAG--W-KLKE---EYLP--SGWKCLVCGASDS-----------QLPPNFIKLPKDAYTPDFMAASDC 282 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~---~ll~--~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~pdlLa~aDl 282 (953)
..+.++++.|+.... . .+++ .+.. +++.+++.|.... .+.+++.+.++.+.++++++.+|+
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~ 266 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADL 266 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCE
Confidence 445677888877642 2 2323 2222 3677787776542 146789998888888899999999
Q ss_pred EEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHH---HHHHHHHhC
Q 002206 283 MLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWK---PYLERAISL 349 (953)
Q Consensus 283 fIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~---~al~~ll~~ 349 (953)
+|... ..+++.||+++|+|+|+.+.+ ...+.++....|..++..+. +.+. .++..++.+
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~------~~~e~i~~~~~g~~~~~~~~--~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCP------GPREILEDGENGLLVPVGDE--AALAAAALALLDLLLD 332 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCC------ChHHHhcCCCceEEECCCCH--HHHHHHHHHHHhccCC
Confidence 99532 346899999999999997643 23456777788988876653 4553 344444433
No 123
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.70 E-value=2.6e-06 Score=98.59 Aligned_cols=119 Identities=17% Similarity=0.061 Sum_probs=78.4
Q ss_pred CCcEEEEEcCCCCch--Hh-HHHh---h--CCCCcEEEEeCCCCC-----------CCCCCeEECCCCC--CHHHHHhhc
Q 002206 222 DVKLLILNFGGQPAG--WK-LKEE---Y--LPSGWKCLVCGASDS-----------QLPPNFIKLPKDA--YTPDFMAAS 280 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~~-ll~~---l--l~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~--~~pdlLa~a 280 (953)
++..++++.|..... .. +++. + ..+++.+++.|.... .+.++|.+.++.+ .++++|+.+
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~a 270 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQG 270 (398)
T ss_pred CCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhC
Confidence 345677788876552 22 3332 2 135678888876541 1456788888764 466899999
Q ss_pred CEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 281 DCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 281 DlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
|++|... |+ .++.|||++|+|+|+.+.++..| .+. .|.+..... ..+.+.++|.+++++.
T Consensus 271 d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e------~i~-~~~~~~~~~---~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 271 HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPE------VLP-PDMILLAEP---DVESIVRKLEEAISIL 334 (398)
T ss_pred CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchh------hee-CCceeecCC---CHHHHHHHHHHHHhCh
Confidence 9999643 33 49999999999999987554333 233 344444332 3578999999998754
No 124
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.70 E-value=2.4e-06 Score=99.89 Aligned_cols=82 Identities=12% Similarity=0.017 Sum_probs=58.6
Q ss_pred eEECCCCCCHHHHHhhcCE-EEe----cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhh
Q 002206 264 FIKLPKDAYTPDFMAASDC-MLG----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGH 338 (953)
Q Consensus 264 V~v~~~~~~~pdlLa~aDl-fIt----hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~ 338 (953)
|.+.+....++++++.+|+ |++ -+|..++.||+++|+|+|+.|. ...+....+.+.+.|+++.. .| ++.
T Consensus 304 v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~--~~~~~e~~~~~~~~g~~~~~--~d--~~~ 377 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPH--TFNFKEIFERLLQAGAAIQV--ED--AED 377 (425)
T ss_pred EEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCC--ccCHHHHHHHHHHCCCeEEE--CC--HHH
Confidence 4444444568899999999 553 2344579999999999999883 33445566777777877653 33 568
Q ss_pred HHHHHHHHHhCCC
Q 002206 339 WKPYLERAISLKP 351 (953)
Q Consensus 339 l~~al~~ll~~~~ 351 (953)
|.++|.++++++.
T Consensus 378 La~~l~~ll~~~~ 390 (425)
T PRK05749 378 LAKAVTYLLTDPD 390 (425)
T ss_pred HHHHHHHHhcCHH
Confidence 8999999997763
No 125
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.69 E-value=3.8e-06 Score=94.78 Aligned_cols=121 Identities=17% Similarity=0.105 Sum_probs=82.2
Q ss_pred CCcEEEEEcCCCCch--H-hHHH---hhCC--CCcEEEEeCCCCC-----------CCCCCeEECCCCC--CHHHHHhhc
Q 002206 222 DVKLLILNFGGQPAG--W-KLKE---EYLP--SGWKCLVCGASDS-----------QLPPNFIKLPKDA--YTPDFMAAS 280 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~---~ll~--~~~~~vv~G~~~~-----------~lp~NV~v~~~~~--~~pdlLa~a 280 (953)
+.+.+++++|+.... . .+++ .+.. +++.+.++|.... .+++||++.++.+ .++++|+.+
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~a 256 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAA 256 (355)
T ss_pred CCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhC
Confidence 345667777876542 2 2333 2222 4667777776542 1468899988874 456899999
Q ss_pred CEEEec----------CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 281 DCMLGK----------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 281 DlfIth----------gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
|++|.. +..+++.||+++|+|+|+.+.+... +.++....|..++..+ .+.+.++|.++++++
T Consensus 257 di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~------~~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 328 (355)
T cd03799 257 DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIP------ELVEDGETGLLVPPGD--PEALADAIERLLDDP 328 (355)
T ss_pred CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcc------hhhhCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 999973 3346899999999999998754332 2355555788887654 578999999998766
No 126
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.68 E-value=2.4e-07 Score=99.48 Aligned_cols=115 Identities=16% Similarity=0.152 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHH-hCCCCC---CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhcccc
Q 002206 610 AAYVAGTILVLMTE-LGVRFE---DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIV 685 (953)
Q Consensus 610 ~~y~~~~~~~~l~~-~g~~~~---~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~ 685 (953)
.|.+..++..+.+. .+.... .|++|.+..+||+++|||||||-++|++.+++.+++.+++++++.++|.+.
T Consensus 61 ~NLv~kA~~~l~~~~~~~~~~~~~~gv~I~i~K~IP~gaGLGggSSdAAA~L~aln~l~~~~ls~~eL~~lA~~l----- 135 (257)
T PRK04181 61 ENIIYKAYQELKNKGFSNELIEFFKKKAIEVEKNIPTGAGLGGGSSDAATFLLMLNEILNLKLSLEELAEIGSKV----- 135 (257)
T ss_pred CcHHHHHHHHHHHhccccccccCCCceEEEEEeCCCCcCcccccHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh-----
Confidence 46666666655442 332111 489999999999999999999999999999999999999999999999754
Q ss_pred CCCCCccchhhhhcc-CcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccC
Q 002206 686 GAPCGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 686 G~~sG~~D~~~~~~G-g~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~ 739 (953)
| .|---+++| +. + +.... ++..++++.+.. .++++..++.-+|.
T Consensus 136 ----G-aDvPffl~~~~~--a-~~~G~-Ge~l~~l~~~~~-~~~lv~P~~~vsT~ 180 (257)
T PRK04181 136 ----G-ADVAFFISGYKS--A-NVSGI-GEIVEEFEEEIL-NLEIFTPNIFCSTK 180 (257)
T ss_pred ----C-CCccEEecCCce--E-EEEee-CCeeEECCCCCC-eEEEECCCCCcCHH
Confidence 2 477677777 52 2 22222 233345532222 38888887776664
No 127
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.66 E-value=1.9e-06 Score=98.68 Aligned_cols=128 Identities=15% Similarity=0.030 Sum_probs=83.8
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCC----------------CCCCCeEEC
Q 002206 212 EVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS----------------QLPPNFIKL 267 (953)
Q Consensus 212 e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~----------------~lp~NV~v~ 267 (953)
.+++.++++++++ ++++.|..... . .+++. +. .+++.++++|.... .+.+++.++
T Consensus 179 ~~~~~~~~~~~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 257 (372)
T cd03792 179 YILEKYGIDPERP-YITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVL 257 (372)
T ss_pred HHHHHhCCCCCCc-EEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEE
Confidence 5667788765544 56777877652 2 23332 22 25677888876421 134577776
Q ss_pred CCC----CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhH
Q 002206 268 PKD----AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHW 339 (953)
Q Consensus 268 ~~~----~~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l 339 (953)
++. ..++++++++|+|+..+ | ..++.||+++|+|+|+.+.++..|+ +.....|+.++. .+.+
T Consensus 258 ~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~------i~~~~~g~~~~~----~~~~ 327 (372)
T cd03792 258 TLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQ------IEDGETGFLVDT----VEEA 327 (372)
T ss_pred ecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhh------cccCCceEEeCC----cHHH
Confidence 664 34568999999999654 2 2489999999999999875444433 555666776653 3467
Q ss_pred HHHHHHHHhCC
Q 002206 340 KPYLERAISLK 350 (953)
Q Consensus 340 ~~al~~ll~~~ 350 (953)
..+|.++++++
T Consensus 328 a~~i~~ll~~~ 338 (372)
T cd03792 328 AVRILYLLRDP 338 (372)
T ss_pred HHHHHHHHcCH
Confidence 77888888765
No 128
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.65 E-value=1e-06 Score=90.16 Aligned_cols=109 Identities=22% Similarity=0.337 Sum_probs=81.7
Q ss_pred HHHhCCCC--CCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhh
Q 002206 621 MTELGVRF--EDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASA 698 (953)
Q Consensus 621 l~~~g~~~--~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~ 698 (953)
+.+++++. ..|+++.+.|+||.|.||+||.|=.||++.|++.++|..+.+.+|+++|..+| |+ |- ++
T Consensus 71 la~~~~~~~~~~~i~l~lqSsIPvgKG~ASSTADl~At~~A~A~~l~~~l~es~iakLcv~iE------Pt---Ds--ii 139 (293)
T COG4542 71 LARWGVTKLINTGIDLLLQSSIPVGKGMASSTADLVATARATARFLGRELRESEIAKLCVSIE------PT---DS--II 139 (293)
T ss_pred HHHhCccceecCCeeEEEeccccccccccccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhcC------Cc---cc--ee
Confidence 44555542 36899999999999999999999999999999999999999999999999998 32 22 33
Q ss_pred ccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccCCCCCcc
Q 002206 699 CGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGS 745 (953)
Q Consensus 699 ~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~ 745 (953)
|-+ +.+||.+...+.+...-++.+.+|+++.+..-.| .+|+.
T Consensus 140 F~~---~tlFd~r~g~~~~~~g~~PpL~ilv~e~~~~v~T--~~y~q 181 (293)
T COG4542 140 FDK---ATLFDQREGRVIEFLGEMPPLHILVFEGKGTVET--VDYNQ 181 (293)
T ss_pred ccc---ceeehhccchHHHhcCCCCceEEEEEcCCCceee--eeccC
Confidence 433 4667766655433333346788999887655443 35764
No 129
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.64 E-value=5.3e-06 Score=93.62 Aligned_cols=120 Identities=16% Similarity=0.069 Sum_probs=82.5
Q ss_pred CCcEEEEEcCCCCch--H-hHHHhh--CCCCcEEEEeCCCCC-----------CCCCCeEECCCCCC--HHHHHhhcCEE
Q 002206 222 DVKLLILNFGGQPAG--W-KLKEEY--LPSGWKCLVCGASDS-----------QLPPNFIKLPKDAY--TPDFMAASDCM 283 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~~l--l~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~--~pdlLa~aDlf 283 (953)
.++.++++.|+.... . .+++.+ +. ++.++++|.... .+.+||.++++++. ++++++.||++
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~-~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~ 267 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEAAAALP-DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVF 267 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHHHHhcc-CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEE
Confidence 344567788876552 2 233322 23 677888876541 14579999998763 55888999999
Q ss_pred Eec-----CC-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH-cCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 284 LGK-----IG-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 284 Ith-----gG-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~-~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
|.- -| ..++.||+++|+|+|+.+.+...|. +.. .+.|..++..+ .+.|.++|.++++++
T Consensus 268 i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~------i~~~~~~g~~~~~~d--~~~~~~~i~~l~~~~ 333 (357)
T cd03795 268 VFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY------VNLHGVTGLVVPPGD--PAALAEAIRRLLEDP 333 (357)
T ss_pred EeCCcccccccchHHHHHHHcCCCEEecCCCCchhH------HhhCCCceEEeCCCC--HHHHHHHHHHHHHCH
Confidence 932 23 3479999999999999875443333 443 67888887655 478999999999876
No 130
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.64 E-value=4.9e-06 Score=93.34 Aligned_cols=122 Identities=19% Similarity=0.092 Sum_probs=84.1
Q ss_pred CCcEEEEEcCCCCch---HhHHH---hhCC--CCcEEEEeCCCCC-----------CCCCCeEECCCCCC--HHHHHhhc
Q 002206 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDS-----------QLPPNFIKLPKDAY--TPDFMAAS 280 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~---~~ll~---~ll~--~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~--~pdlLa~a 280 (953)
+.+.++++.|+.... ..+++ .+.. +++.++++|.... .+++||.+.++.+. +.+++..|
T Consensus 200 ~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (377)
T cd03798 200 EDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAA 279 (377)
T ss_pred CCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhc
Confidence 345677788876552 12222 2222 3567778886542 14678998888753 55889999
Q ss_pred CEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 281 DCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 281 DlfIth----gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
|++|.. +..+++.||+++|+|+|+.+.+. ..+.+...+.|..++..+ .+++.++|.++++++.
T Consensus 280 d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~------~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 280 DVFVLPSLREGFGLVLLEAMACGLPVVATDVGG------IPEIITDGENGLLVPPGD--PEALAEAILRLLADPW 346 (377)
T ss_pred CeeecchhhccCChHHHHHHhcCCCEEEecCCC------hHHHhcCCcceeEECCCC--HHHHHHHHHHHhcCcH
Confidence 999943 34468999999999999977432 344566777788887665 4688999999998763
No 131
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.63 E-value=4.3e-06 Score=94.39 Aligned_cols=119 Identities=18% Similarity=0.201 Sum_probs=80.7
Q ss_pred CcEEEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCCC----------------CCCCeEECCC-CC--CHHH
Q 002206 223 VKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ----------------LPPNFIKLPK-DA--YTPD 275 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~~----------------lp~NV~v~~~-~~--~~pd 275 (953)
.+.+++++|+.... . .+++. +. .+++.++++|..... +.+||.+++. .+ .+++
T Consensus 184 ~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~ 263 (366)
T cd03822 184 GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPE 263 (366)
T ss_pred CCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHH
Confidence 34566777876552 2 23332 22 256788888864321 3568887754 43 3568
Q ss_pred HHhhcCEEEec------CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 276 FMAASDCMLGK------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 276 lLa~aDlfIth------gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
+|+.+|++|.. +..++++||+++|+|+|+.+.+. .++ +...+.|..++..+ .+.+.++|.+++++
T Consensus 264 ~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~------i~~~~~g~~~~~~d--~~~~~~~l~~l~~~ 334 (366)
T cd03822 264 LFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEE------VLDGGTGLLVPPGD--PAALAEAIRRLLAD 334 (366)
T ss_pred HHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hhe------eeeCCCcEEEcCCC--HHHHHHHHHHHHcC
Confidence 99999999942 22358999999999999988543 333 55667888887766 47899999999976
Q ss_pred C
Q 002206 350 K 350 (953)
Q Consensus 350 ~ 350 (953)
+
T Consensus 335 ~ 335 (366)
T cd03822 335 P 335 (366)
T ss_pred h
Confidence 5
No 132
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.62 E-value=5e-06 Score=96.17 Aligned_cols=82 Identities=12% Similarity=-0.052 Sum_probs=61.8
Q ss_pred CCCeEECCCCC--CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCC
Q 002206 261 PPNFIKLPKDA--YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL 334 (953)
Q Consensus 261 p~NV~v~~~~~--~~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl 334 (953)
.++|+++++++ .++++|+.+|++|.-. |+ .++.|||++|+|+|+...++. .+.+.....|+.++..|
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~------~e~i~~~~~G~lv~~~d- 352 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPV------REVITDGENGLLVDFFD- 352 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCc------hhhcccCCceEEcCCCC-
Confidence 35788888874 4568999999999532 22 479999999999999875433 33355556788887666
Q ss_pred ChhhHHHHHHHHHhCC
Q 002206 335 LTGHWKPYLERAISLK 350 (953)
Q Consensus 335 ~~~~l~~al~~ll~~~ 350 (953)
++.|.++|.++++++
T Consensus 353 -~~~la~~i~~ll~~~ 367 (396)
T cd03818 353 -PDALAAAVIELLDDP 367 (396)
T ss_pred -HHHHHHHHHHHHhCH
Confidence 579999999999876
No 133
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.60 E-value=5.1e-06 Score=93.03 Aligned_cols=114 Identities=15% Similarity=0.058 Sum_probs=76.3
Q ss_pred EEEEEcCCCCch--H-hHHHhhCCCCcEEEEeCCCCCC------------CCCCeEECCCCCC--HHHHHhhcCEEEec-
Q 002206 225 LLILNFGGQPAG--W-KLKEEYLPSGWKCLVCGASDSQ------------LPPNFIKLPKDAY--TPDFMAASDCMLGK- 286 (953)
Q Consensus 225 vVlvs~Gs~~~~--~-~ll~~ll~~~~~~vv~G~~~~~------------lp~NV~v~~~~~~--~pdlLa~aDlfIth- 286 (953)
.++++.|..... . .+++.....++.+++.|..... +.++|++.++.+. ++.+|+.+|++|..
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCC
Confidence 345666766442 2 2334443456788888766421 2578999998754 45889999999952
Q ss_pred ---CC-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHh
Q 002206 287 ---IG-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (953)
Q Consensus 287 ---gG-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~ 348 (953)
-| ..++.|||++|+|+|+.+.++.. +.+.....|..++. .+.+.++|.+++.
T Consensus 252 ~~~E~~~~~~lEAma~G~PvI~~~~~~~~------e~i~~~~~g~l~~~----~~~l~~~l~~l~~ 307 (335)
T cd03802 252 LWEEPFGLVMIEAMACGTPVIAFRRGAVP------EVVEDGVTGFLVDS----VEELAAAVARADR 307 (335)
T ss_pred cccCCcchHHHHHHhcCCCEEEeCCCCch------hheeCCCcEEEeCC----HHHHHHHHHHHhc
Confidence 23 35899999999999998754433 23444446877764 6788889988864
No 134
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.56 E-value=2.7e-06 Score=97.02 Aligned_cols=122 Identities=15% Similarity=0.149 Sum_probs=82.6
Q ss_pred cEEEEEcCCCCc----h-HhHHHhh--CCCCcEEEEeCCCCC-----------CCCCCeEECCCCCC----HHHHHhhcC
Q 002206 224 KLLILNFGGQPA----G-WKLKEEY--LPSGWKCLVCGASDS-----------QLPPNFIKLPKDAY----TPDFMAASD 281 (953)
Q Consensus 224 ~vVlvs~Gs~~~----~-~~ll~~l--l~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~----~pdlLa~aD 281 (953)
+.+++++|.... + ..+++++ +..++.+++.|.... .++++|++.|++.. ++++++.+|
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d 259 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVS 259 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCc
Confidence 456677776532 1 2344432 234677888876542 15688999998743 456677899
Q ss_pred EEEecC---C-hhHHHHHHHcCCcEEEEe-CCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCc
Q 002206 282 CMLGKI---G-YGTVSEALAYKLPFVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY 353 (953)
Q Consensus 282 lfIthg---G-~~Tv~Eal~~GvP~l~iP-~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~ 353 (953)
++|... | ..++.|||++|+|+|+.. ..+.. +.++....|..++..+ .+++.++|.++++++..+
T Consensus 260 ~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~------eiv~~~~~G~lv~~~d--~~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 260 ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPR------DIIKPGLNGELYTPGN--IDEFVGKLNKVISGEVKY 328 (359)
T ss_pred EEEECCcccCcChHHHHHHHcCCCEEEeCCCCChH------HHccCCCceEEECCCC--HHHHHHHHHHHHhCcccC
Confidence 999643 2 368999999999999986 33222 3355556688887665 479999999999888543
No 135
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.55 E-value=1.7e-05 Score=93.09 Aligned_cols=83 Identities=19% Similarity=0.109 Sum_probs=61.6
Q ss_pred CCCCeEECCCC--CCHHHHHhhc----CEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002206 260 LPPNFIKLPKD--AYTPDFMAAS----DCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (953)
Q Consensus 260 lp~NV~v~~~~--~~~pdlLa~a----DlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l 329 (953)
+.++|++.+++ +.+|++|+.+ |+||... | ..++.|||++|+|+|+...++. .+.+.....|+.+
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~------~eiv~~~~~G~lv 388 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGP------RDIIANCRNGLLV 388 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCc------HHHhcCCCcEEEe
Confidence 35678777754 3577888866 9999643 3 2589999999999999875433 3345555678888
Q ss_pred ecCCCChhhHHHHHHHHHhCC
Q 002206 330 IRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 330 ~~~dl~~~~l~~al~~ll~~~ 350 (953)
+..| ++.+.++|.++++++
T Consensus 389 ~~~d--~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 389 DVLD--LEAIASALEDALSDS 407 (439)
T ss_pred CCCC--HHHHHHHHHHHHhCH
Confidence 8766 468999999999766
No 136
>PLN02275 transferase, transferring glycosyl groups
Probab=98.55 E-value=1.4e-05 Score=91.63 Aligned_cols=92 Identities=12% Similarity=0.115 Sum_probs=64.3
Q ss_pred CCcEEEEeCCCCCC---------CC-CCeEECC-CC--CCHHHHHhhcCEEEe----cCC---hhHHHHHHHcCCcEEEE
Q 002206 246 SGWKCLVCGASDSQ---------LP-PNFIKLP-KD--AYTPDFMAASDCMLG----KIG---YGTVSEALAYKLPFVFV 305 (953)
Q Consensus 246 ~~~~~vv~G~~~~~---------lp-~NV~v~~-~~--~~~pdlLa~aDlfIt----hgG---~~Tv~Eal~~GvP~l~i 305 (953)
+++.++++|.+... +. +|+.+++ +. +.+|++|+.+|+||. ..| .+++.||+++|+|+|+.
T Consensus 260 ~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~ 339 (371)
T PLN02275 260 PRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAV 339 (371)
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEe
Confidence 46788888876521 11 4677655 33 457799999999994 112 35799999999999998
Q ss_pred eCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHH
Q 002206 306 RRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 306 P~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll 347 (953)
..++ +.+.++..+.|..++ + ++.+.++|.+++
T Consensus 340 ~~gg------~~eiv~~g~~G~lv~--~--~~~la~~i~~l~ 371 (371)
T PLN02275 340 SYSC------IGELVKDGKNGLLFS--S--SSELADQLLELL 371 (371)
T ss_pred cCCC------hHHHccCCCCeEEEC--C--HHHHHHHHHHhC
Confidence 6322 455577777898885 2 578888887764
No 137
>PRK00654 glgA glycogen synthase; Provisional
Probab=98.54 E-value=1.5e-05 Score=94.20 Aligned_cols=137 Identities=18% Similarity=0.137 Sum_probs=87.6
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCch--Hh-HHHh---hCCCCcEEEEeCCCCC-----------CCCCCeEE-CCCCC
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDS-----------QLPPNFIK-LPKDA 271 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~-ll~~---ll~~~~~~vv~G~~~~-----------~lp~NV~v-~~~~~ 271 (953)
++.+++.+++++++..++++.|..... .. ++++ +...++.+++.|...+ .++.++.+ .++..
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~ 347 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDE 347 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCH
Confidence 346778888875445567777877652 22 3332 3334677888876531 14666654 45544
Q ss_pred C-HHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 272 Y-TPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 272 ~-~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
. ++.+++.+|+||.-. |+ .+.+||+++|+|.|+...++..|.-.+...-...+.|+.++..+ ++.+.++|.++
T Consensus 348 ~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d--~~~la~~i~~~ 425 (466)
T PRK00654 348 ALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFN--AEDLLRALRRA 425 (466)
T ss_pred HHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCC--HHHHHHHHHHH
Confidence 3 347899999999642 33 58999999999999987655555311100001227788887665 46888899888
Q ss_pred Hh
Q 002206 347 IS 348 (953)
Q Consensus 347 l~ 348 (953)
++
T Consensus 426 l~ 427 (466)
T PRK00654 426 LE 427 (466)
T ss_pred HH
Confidence 75
No 138
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.52 E-value=9.2e-06 Score=92.38 Aligned_cols=119 Identities=18% Similarity=0.068 Sum_probs=83.2
Q ss_pred cEEEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCC---------C--CCCCeEECCCCC--CHHHHHhhcCE
Q 002206 224 KLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS---------Q--LPPNFIKLPKDA--YTPDFMAASDC 282 (953)
Q Consensus 224 ~vVlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~---------~--lp~NV~v~~~~~--~~pdlLa~aDl 282 (953)
+.++++.|+.... . .+++. +. .+++.++++|.... . ++++|++.++.+ .++++|+.+|+
T Consensus 188 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~ 267 (367)
T cd05844 188 PPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARI 267 (367)
T ss_pred CcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCE
Confidence 3456667776652 2 23332 22 24678888886531 1 467899888874 36789999999
Q ss_pred EEecC----------ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 283 MLGKI----------GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 283 fIthg----------G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
+|... -.+++.||+++|+|+|+.+... +.+.+...+.|..++..+ ++.|.++|.++++++
T Consensus 268 ~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~------~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~ 337 (367)
T cd05844 268 FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG------IPEAVEDGETGLLVPEGD--VAALAAALGRLLADP 337 (367)
T ss_pred EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC------chhheecCCeeEEECCCC--HHHHHHHHHHHHcCH
Confidence 98532 2468999999999999987543 445566778898887655 468999999998765
No 139
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.47 E-value=1.7e-06 Score=81.81 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=82.1
Q ss_pred cEEEEEcCCCCch--------HhHHHhhCCCCc--EEEEeCCCCCC-------C--CCCeE--ECCCCCCHHHHHhhcCE
Q 002206 224 KLLILNFGGQPAG--------WKLKEEYLPSGW--KCLVCGASDSQ-------L--PPNFI--KLPKDAYTPDFMAASDC 282 (953)
Q Consensus 224 ~vVlvs~Gs~~~~--------~~ll~~ll~~~~--~~vv~G~~~~~-------l--p~NV~--v~~~~~~~pdlLa~aDl 282 (953)
..+||+.|+..+. .++++++.+-++ .++-.|++..- . -..+. .+.|.+.+.+.++.||+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Adl 83 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADL 83 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhccE
Confidence 4799999988763 133344444443 34445776421 1 22333 34556677799999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCC--CCCchHHHHHHHHHcCcEEEEecCCC
Q 002206 283 MLGKIGYGTVSEALAYKLPFVFVRRD--YFNEEPFLRNMLEFYQGGVEMIRRDL 334 (953)
Q Consensus 283 fIthgG~~Tv~Eal~~GvP~l~iP~~--~~~DQ~~NA~~l~~~G~g~~l~~~dl 334 (953)
+|+|+|.||++|.+..|+|.|+++.. ..+.|...|..|++.|+-....+.++
T Consensus 84 VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~L 137 (170)
T KOG3349|consen 84 VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPSTL 137 (170)
T ss_pred EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccch
Confidence 99999999999999999999999854 23678889999999999999988775
No 140
>PRK05905 hypothetical protein; Provisional
Probab=98.45 E-value=4e-06 Score=89.73 Aligned_cols=112 Identities=15% Similarity=0.153 Sum_probs=82.2
Q ss_pred HHHHH-HHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCC
Q 002206 610 AAYVA-GTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAP 688 (953)
Q Consensus 610 ~~y~~-~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~ 688 (953)
.|.+. .++..+.+..+.. +|++|.+..+||.++||||+||=++|++.+|+++++ ++.+++.+++...
T Consensus 66 ~nli~~ka~~~l~~~~~~~--~~~~i~l~K~IP~~aGLGggSSDAAa~L~~Ln~l~~--ls~~~L~~ia~~l-------- 133 (258)
T PRK05905 66 SRLILVKTLEWLRDKYNIK--NHFKIKIKKRIPIGSGLGSGSSNAAVLMKWILEFEG--INEINYKDVVNKL-------- 133 (258)
T ss_pred cchHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCCCCCchHHHHHHHHHHHHhC--CCHHHHHHHHHHh--------
Confidence 45555 6666666666754 689999999999999999999999999999999997 6888998887753
Q ss_pred CCccchhhhhcc-CcceEEEEeecCccceeeeecCCCeEEEEEeCCCccccC
Q 002206 689 CGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 739 (953)
Q Consensus 689 sG~~D~~~~~~G-g~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~ 739 (953)
| .|---+++| +. + +.... ++..++++.+....+++++.++.-+|+
T Consensus 134 -G-ADVPFfl~g~~~--a-~~~G~-GE~l~pl~~~~~~~~vlv~P~~~vST~ 179 (258)
T PRK05905 134 -G-SDIPFFLSGYKT--A-YISDY-GSQVEDLIGQFKLTYKVIFMNVNVSTK 179 (258)
T ss_pred -C-CCcceEEeCCcc--E-EEEee-CceeEECCCCCCceEEEECCCCCCCHH
Confidence 3 477678888 63 2 22322 233356654444568899887776664
No 141
>PLN02407 diphosphomevalonate decarboxylase
Probab=98.42 E-value=5.1e-06 Score=91.16 Aligned_cols=60 Identities=23% Similarity=0.303 Sum_probs=52.8
Q ss_pred EEEEEe--CCCCCCCCchHHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhccccCCCCCccchhhhhccCc
Q 002206 633 SMLVSS--AVPEGKGVSSSASVEVASMSAIAAAHGLNIH-PRDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (953)
Q Consensus 633 ~i~i~s--~iP~g~GLgSSAA~~va~~~al~~~~~~~l~-~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~ 702 (953)
++.|.| ++|.++||+||||..+|++.|+..+++++++ +.++..+|. +| || .|.- +++||.
T Consensus 105 ~~~I~S~N~~PtaaGLaSSAs~~aAl~~al~~~~~~~~~~~~~ls~lAr------~G--SG-Sa~r-S~~Gg~ 167 (343)
T PLN02407 105 HVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVKEDFPGELSAIAR------QG--SG-SACR-SLYGGF 167 (343)
T ss_pred cEEEEeccCCccccchHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHh------cc--Ch-HHHH-HhhCCe
Confidence 566666 9999999999999999999999999999999 999999998 45 66 3666 999994
No 142
>COG1907 Predicted archaeal sugar kinases [General function prediction only]
Probab=98.39 E-value=1.9e-05 Score=83.00 Aligned_cols=193 Identities=21% Similarity=0.328 Sum_probs=128.0
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEe
Q 002206 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 709 (953)
Q Consensus 630 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~ 709 (953)
.|++|.|.+.+|.-.||||-..++.|++.|++.++|+.++-+|||...-+ |.-||+ --++--+||. .+|
T Consensus 70 ~gv~I~I~~~~P~HvGLGS~TQlaLa~a~ai~~i~gl~~~~~elA~~vgR------G~tSgi-Gv~afe~GGF----IVD 138 (312)
T COG1907 70 EGVKIEIRSDIPAHVGLGSTTQLALAVASAILEIYGLELSIRELAFAVGR------GGTSGI-GVYAFEYGGF----IVD 138 (312)
T ss_pred CceEEEEEecCchhcCCChHHHHHHHHHHHHHHHhcCCCCHHHHHHHHcc------CCccce-eEEEEEECCE----EEE
Confidence 68999999999999999999999999999999999999988888766543 455664 5667778883 345
Q ss_pred ec------Cc--c-ceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCc
Q 002206 710 CQ------PA--E-LLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEP 780 (953)
Q Consensus 710 ~~------~~--~-~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~ 780 (953)
.. |. . ..-..++|.+++|+++=..++|... . + +
T Consensus 139 GGh~~~f~ps~~sP~I~R~dfPedW~~VlaIP~~~rg~~----~-~--------~------------------------- 180 (312)
T COG1907 139 GGHSFGFLPSSASPLIFRLDFPEDWRFVLAIPEVERGVS----G-R--------R------------------------- 180 (312)
T ss_pred CCcccCcccCCCCceeeeecCCCceEEEEEecCCCcccc----c-h--------H-------------------------
Confidence 21 11 1 0134577889999998554444211 0 0 0
Q ss_pred cchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHH
Q 002206 781 EVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKA 860 (953)
Q Consensus 781 ~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~ 860 (953)
...+++ ..|-++++... ++.|++ ...
T Consensus 181 ---E~~if~------~~~p~p~~~~~----------------------------------------~ls~~v-----Lm~ 206 (312)
T COG1907 181 ---EVDIFK------KYCPVPLEEVG----------------------------------------ELSHRV-----LMK 206 (312)
T ss_pred ---HHHHHH------hcCCCCHHHHH----------------------------------------HHHHHH-----HHH
Confidence 011111 12333332211 122211 124
Q ss_pred HHHHHHccCChHHHHHHHHHHHHhhhhh---hh---cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCce
Q 002206 861 FKALLTAAASDDQLTSLGELLYQCHYSY---SA---CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGT 934 (953)
Q Consensus 861 ~~~~l~~~~~~~~~~~lG~lm~~sh~sl---~~---~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~ 934 (953)
..-++-.+ |++.||+-|++-|... -+ -++-|+.+..+++.+++ + ++||=++ -||-+
T Consensus 207 mmPavvE~----Die~fg~~l~~iQ~l~g~~f~~~e~~~~~~~V~~iv~~m~~-----------~-a~~agqS--SwGPt 268 (312)
T COG1907 207 MMPAVVER----DIESFGEALNEIQELGGKWFKKVEGGLQREDVKEIVDEMVE-----------A-AYGAGQS--SWGPT 268 (312)
T ss_pred HhHHHHhh----CHHHHHHHHHHHHHHHhhhhhhhhceeccHHHHHHHHHHHH-----------h-ccccccc--ccCCE
Confidence 44444443 9999999999988887 33 35578999999999887 4 5777665 58899
Q ss_pred EEEeccCCh
Q 002206 935 ICVIGRNSL 943 (953)
Q Consensus 935 v~~l~~~~~ 943 (953)
+..+.++..
T Consensus 269 vY~i~d~~~ 277 (312)
T COG1907 269 VYGIVDSRE 277 (312)
T ss_pred EEEeccccc
Confidence 999876654
No 143
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.38 E-value=4.1e-05 Score=88.84 Aligned_cols=120 Identities=16% Similarity=0.063 Sum_probs=84.2
Q ss_pred CcEEEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCC-----------CCCCCeEECCCCC--CHHHHHhhcC
Q 002206 223 VKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS-----------QLPPNFIKLPKDA--YTPDFMAASD 281 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~--~~pdlLa~aD 281 (953)
.+..+++.|..... . .++++ +. .+++.+++.|.... .+.++|.+.++.+ .++++|+.+|
T Consensus 221 ~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aD 300 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDAD 300 (406)
T ss_pred CCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 45667778877653 2 23332 22 24577788876541 1467899988864 4668999999
Q ss_pred EEEec---------CCh-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHh-CC
Q 002206 282 CMLGK---------IGY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS-LK 350 (953)
Q Consensus 282 lfIth---------gG~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~-~~ 350 (953)
+||.. -|+ ++++|||++|+|+|+...++..|. ++....|+.++..| ++.|.++|.++++ ++
T Consensus 301 v~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~------v~~~~~G~lv~~~d--~~~la~ai~~l~~~d~ 372 (406)
T PRK15427 301 VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPEL------VEADKSGWLVPEND--AQALAQRLAAFSQLDT 372 (406)
T ss_pred EEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhh------hcCCCceEEeCCCC--HHHHHHHHHHHHhCCH
Confidence 99953 233 578999999999999875544333 55566788887766 5789999999997 65
No 144
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.37 E-value=5.2e-05 Score=87.12 Aligned_cols=135 Identities=13% Similarity=0.094 Sum_probs=84.3
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCch---HhHHHhh--CCCCcEEEEeCCCC--CC-----------C---CCCeEEC
Q 002206 209 SRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASD--SQ-----------L---PPNFIKL 267 (953)
Q Consensus 209 ~~~e~~~~l~~~~~~~vVlvs~Gs~~~~---~~ll~~l--l~~~~~~vv~G~~~--~~-----------l---p~NV~v~ 267 (953)
.....++.+++++++ .++++.|..... ..+++.+ +.+++.++++|... +. + ..++..+
T Consensus 187 ~~~~~~~~~~~~~~~-~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 265 (388)
T TIGR02149 187 DGNVVLDRYGIDRSR-PYILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWI 265 (388)
T ss_pred chHHHHHHhCCCCCc-eEEEEEcccccccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEe
Confidence 344566777775444 456677876652 2333332 23456555554321 10 1 1346544
Q ss_pred -CCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCCh----
Q 002206 268 -PKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT---- 336 (953)
Q Consensus 268 -~~~~--~~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~---- 336 (953)
++.+ .++++|+++|+||.-. ...++.||+++|+|+|+.+.++ +.+.++..+.|..++..+...
T Consensus 266 ~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~------~~e~i~~~~~G~~~~~~~~~~~~~~ 339 (388)
T TIGR02149 266 NKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGG------IPEVVVDGETGFLVPPDNSDADGFQ 339 (388)
T ss_pred cCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCC------HHHHhhCCCceEEcCCCCCcccchH
Confidence 3332 3668999999999642 2357899999999999987433 344566667798888766422
Q ss_pred hhHHHHHHHHHhCC
Q 002206 337 GHWKPYLERAISLK 350 (953)
Q Consensus 337 ~~l~~al~~ll~~~ 350 (953)
+.|.++|.++++++
T Consensus 340 ~~l~~~i~~l~~~~ 353 (388)
T TIGR02149 340 AELAKAINILLADP 353 (388)
T ss_pred HHHHHHHHHHHhCH
Confidence 57888898888766
No 145
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=98.36 E-value=8.6e-05 Score=88.04 Aligned_cols=130 Identities=21% Similarity=0.141 Sum_probs=86.2
Q ss_pred HHHHHHhCCCC-CCcEEEEEcCCCCch--Hh-HHH---hhCCCCcEEEEeCCCCCC-----------CCCCeEECCCC-C
Q 002206 211 KEVRKELGIED-DVKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ-----------LPPNFIKLPKD-A 271 (953)
Q Consensus 211 ~e~~~~l~~~~-~~~vVlvs~Gs~~~~--~~-ll~---~ll~~~~~~vv~G~~~~~-----------lp~NV~v~~~~-~ 271 (953)
..+++.++++. +...++++.|..... .. +++ .+...++.+++.|...+. .+.++.+.... .
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~ 356 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDE 356 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCH
Confidence 45778888864 234566777877652 22 222 233345788888876321 46677664332 2
Q ss_pred C-HHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc------CcEEEEecCCCChhhHH
Q 002206 272 Y-TPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHWK 340 (953)
Q Consensus 272 ~-~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~------G~g~~l~~~dl~~~~l~ 340 (953)
. ++.+++.+|++|.-. |. .+.+||+++|+|+|+....+..|. +... +.|+.++..+ ++.+.
T Consensus 357 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~------v~~~~~~~~~~~G~l~~~~d--~~~la 428 (473)
T TIGR02095 357 ALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT------VVDGDPEAESGTGFLFEEYD--PGALL 428 (473)
T ss_pred HHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccce------EecCCCCCCCCceEEeCCCC--HHHHH
Confidence 2 347899999999643 33 488999999999999876555554 3333 7788887665 46888
Q ss_pred HHHHHHHh
Q 002206 341 PYLERAIS 348 (953)
Q Consensus 341 ~al~~ll~ 348 (953)
++|.+++.
T Consensus 429 ~~i~~~l~ 436 (473)
T TIGR02095 429 AALSRALR 436 (473)
T ss_pred HHHHHHHH
Confidence 99988876
No 146
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.34 E-value=5.8e-05 Score=83.43 Aligned_cols=290 Identities=19% Similarity=0.192 Sum_probs=162.3
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccc-cChHHHHHHHHHHhh
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSETAV 100 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 100 (953)
+.|.-.|- .-...|.++|.++--+|.|++-..+.+.....+ ..+ +.. .++ +.....+..+....
T Consensus 7 ~AGE~SGD-llGa~LikaLk~~~~~~efvGvgG~~m~aeG~~-sl~-------~~~-----elsvmGf~EVL~~lp~ll- 71 (381)
T COG0763 7 SAGEASGD-LLGAGLIKALKARYPDVEFVGVGGEKMEAEGLE-SLF-------DME-----ELSVMGFVEVLGRLPRLL- 71 (381)
T ss_pred Eecccchh-hHHHHHHHHHHhhCCCeEEEEeccHHHHhccCc-ccc-------CHH-----HHHHhhHHHHHHHHHHHH-
Confidence 55665554 345678899999855898886654333222221 011 110 011 11112222232221
Q ss_pred ccHHHHHHHHHHHHHcCCCcEEE-ECCCchHHHHHHH---hC--CcEEEE-ecCChhHHHHHHHhhhccchHHHHHHHHh
Q 002206 101 APRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAAD---AG--IRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (953)
Q Consensus 101 ~~~~~~~~~~~~~L~~~kpDlVV-~D~~~~~~~~A~~---~g--iP~I~i-s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (953)
....+..+.+...+||++| .|.+...+.++++ .+ +|+|.+ +.-.|.+--.. .. .+..
T Consensus 72 ----k~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~R-a~-----------~i~~ 135 (381)
T COG0763 72 ----KIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKR-AV-----------KIAK 135 (381)
T ss_pred ----HHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeechhh-HH-----------HHHH
Confidence 2344556777889999998 6876666666644 45 898875 33334311000 00 0111
Q ss_pred hccccceEEe-cCCCCC---CCCCCceeecCc-ccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCchH-----hHHH
Q 002206 174 DYSHCEFLIR-LPGYCP---MPAFRDVIDVPL-VVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAGW-----KLKE 241 (953)
Q Consensus 174 ~~~~~~~l~~-~~~~~~---~p~~~~v~~vg~-~~~--~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~~-----~ll~ 241 (953)
.+|.++. +|++.. .-..+ .++||= ..+ +..+.++.+++.++++.+.+++.+.-||-.... .|.+
T Consensus 136 ---~~D~lLailPFE~~~y~k~g~~-~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~ 211 (381)
T COG0763 136 ---YVDHLLAILPFEPAFYDKFGLP-CTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQ 211 (381)
T ss_pred ---HhhHeeeecCCCHHHHHhcCCC-eEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHH
Confidence 1222222 233211 01112 456664 222 235677889999999988999999999987631 1222
Q ss_pred ---hhC--CCCcEEEEeCCCCC-C------C-----CCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 002206 242 ---EYL--PSGWKCLVCGASDS-Q------L-----PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (953)
Q Consensus 242 ---~ll--~~~~~~vv~G~~~~-~------l-----p~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~ 304 (953)
.+. -++.+++++-.+.. . + ..++.+.+... .+.|++||+.+..+| +.+.|++.+|+|||+
T Consensus 212 a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~aD~al~aSG-T~tLE~aL~g~P~Vv 288 (381)
T COG0763 212 AAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEK--RKAFAAADAALAASG-TATLEAALAGTPMVV 288 (381)
T ss_pred HHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCchH--HHHHHHhhHHHHhcc-HHHHHHHHhCCCEEE
Confidence 121 25567776543321 0 1 13344433222 389999999999999 789999999999999
Q ss_pred EeCCCCCchHHHHHHHHHcCcEEE--------E----ecCCCChhhHHHHHHHHHhCC
Q 002206 305 VRRDYFNEEPFLRNMLEFYQGGVE--------M----IRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 305 iP~~~~~DQ~~NA~~l~~~G~g~~--------l----~~~dl~~~~l~~al~~ll~~~ 350 (953)
.-....-+ ...++++.+..+.-. + -.++.+++.+..++..++.|.
T Consensus 289 ~Yk~~~it-~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 289 AYKVKPIT-YFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNG 345 (381)
T ss_pred EEeccHHH-HHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcCh
Confidence 76433222 356777776655421 1 124566889999999999877
No 147
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.31 E-value=0.00011 Score=85.39 Aligned_cols=113 Identities=13% Similarity=0.049 Sum_probs=72.1
Q ss_pred EEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCCC---------CCCCeEE-CCCCCCHHHHHhhcCEEEecC
Q 002206 226 LILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ---------LPPNFIK-LPKDAYTPDFMAASDCMLGKI 287 (953)
Q Consensus 226 Vlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~~---------lp~NV~v-~~~~~~~pdlLa~aDlfIthg 287 (953)
++++.|.+... . .++++ +. .+++++++.|.++.. ++-++.+ .++ ....++++.+|+||.-+
T Consensus 230 ~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~-~~~~~~~~~~DvFv~pS 308 (462)
T PLN02846 230 GAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR-DHADPLFHDYKVFLNPS 308 (462)
T ss_pred EEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC-CCHHHHHHhCCEEEECC
Confidence 56677877663 2 23332 21 246778888877531 2223333 343 23347999999999753
Q ss_pred ----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 288 ----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 288 ----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
-.+++.||+++|+|+|+...+. . ..+...+.|..++ +.+.+..++.++++++
T Consensus 309 ~~Et~g~v~lEAmA~G~PVVa~~~~~-~------~~v~~~~ng~~~~----~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 309 TTDVVCTTTAEALAMGKIVVCANHPS-N------EFFKQFPNCRTYD----DGKGFVRATLKALAEE 364 (462)
T ss_pred CcccchHHHHHHHHcCCcEEEecCCC-c------ceeecCCceEecC----CHHHHHHHHHHHHccC
Confidence 2358999999999999987432 2 3355556665552 3568889999998754
No 148
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.31 E-value=0.0004 Score=84.98 Aligned_cols=80 Identities=11% Similarity=-0.031 Sum_probs=56.4
Q ss_pred CCCCeEECCCC---CCHHHHHh----hcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEE
Q 002206 260 LPPNFIKLPKD---AYTPDFMA----ASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE 328 (953)
Q Consensus 260 lp~NV~v~~~~---~~~pdlLa----~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~ 328 (953)
+.++|.+.++. ..+++++. ++|+||.-+ -..++.|||+||+|+|+...++ ..+.++....|..
T Consensus 617 L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG------~~EiV~dg~tGfL 690 (784)
T TIGR02470 617 LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG------PLEIIQDGVSGFH 690 (784)
T ss_pred CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC------HHHHhcCCCcEEE
Confidence 35678887764 23455654 257999643 2269999999999999987543 3444666667999
Q ss_pred EecCCCChhhHHHHHHHHH
Q 002206 329 MIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 329 l~~~dl~~~~l~~al~~ll 347 (953)
++..+ ++.+.++|.+++
T Consensus 691 Vdp~D--~eaLA~aL~~ll 707 (784)
T TIGR02470 691 IDPYH--GEEAAEKIVDFF 707 (784)
T ss_pred eCCCC--HHHHHHHHHHHH
Confidence 98776 468888888776
No 149
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.30 E-value=9e-06 Score=91.23 Aligned_cols=119 Identities=13% Similarity=0.029 Sum_probs=77.7
Q ss_pred CCcEEEEEcCCCCch-HhHH----H---hhCCCCcEEEEeCCCCCC-----CC--CCeEECCCCCCHHHHHhhcCEEEec
Q 002206 222 DVKLLILNFGGQPAG-WKLK----E---EYLPSGWKCLVCGASDSQ-----LP--PNFIKLPKDAYTPDFMAASDCMLGK 286 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~-~~ll----~---~ll~~~~~~vv~G~~~~~-----lp--~NV~v~~~~~~~pdlLa~aDlfIth 286 (953)
+.++|.+..||.... ..++ + .+.....++++++....+ +. ..+.+. ..+.++|++||++|+.
T Consensus 166 ~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~~~i~~~~~~~~~~~~~---~~~~~~m~~aDlal~~ 242 (347)
T PRK14089 166 KEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKGKDLKEIYGDISEFEIS---YDTHKALLEAEFAFIC 242 (347)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcHHHHHHHHhcCCCcEEe---ccHHHHHHhhhHHHhc
Confidence 347899999998763 1111 1 122222466666654311 11 133332 3456999999999999
Q ss_pred CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH---HcCcEEEE-------------ecCCCChhhHHHHHHH
Q 002206 287 IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEM-------------IRRDLLTGHWKPYLER 345 (953)
Q Consensus 287 gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~---~~G~g~~l-------------~~~dl~~~~l~~al~~ 345 (953)
+|..|+ |++.+|+|+|+ ++....-|..||+++. ..|..-.+ -.++.+++.+.+.+.+
T Consensus 243 SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~ 315 (347)
T PRK14089 243 SGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE 315 (347)
T ss_pred CcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH
Confidence 996666 99999999999 5555667889999999 44444333 2355677777777765
No 150
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.26 E-value=3.5e-05 Score=86.90 Aligned_cols=117 Identities=15% Similarity=0.033 Sum_probs=78.2
Q ss_pred cEEEEEcCCCCch--H-hHHHh---hCC--CCcEEEEeCCCCC------------CCCCCeEECCCCC--CHHHHHhhcC
Q 002206 224 KLLILNFGGQPAG--W-KLKEE---YLP--SGWKCLVCGASDS------------QLPPNFIKLPKDA--YTPDFMAASD 281 (953)
Q Consensus 224 ~vVlvs~Gs~~~~--~-~ll~~---ll~--~~~~~vv~G~~~~------------~lp~NV~v~~~~~--~~pdlLa~aD 281 (953)
+.+++..|+.... . .+++. +.. +++.++++|.... ..++||+++++.+ .++++|+.+|
T Consensus 195 ~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d 274 (365)
T cd03809 195 RPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGAR 274 (365)
T ss_pred CCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhh
Confidence 3456677877652 2 23332 221 2457777776432 1467899988873 4568999999
Q ss_pred EEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 282 CMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 282 lfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++|... ..+++.||+++|+|+|+...+...|. +. ..|..+...+ .+.+.++|.++++++
T Consensus 275 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~------~~--~~~~~~~~~~--~~~~~~~i~~l~~~~ 337 (365)
T cd03809 275 AFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEV------AG--DAALYFDPLD--PEALAAAIERLLEDP 337 (365)
T ss_pred hhcccchhccCCCCHHHHhcCCCcEEecCCCCccce------ec--CceeeeCCCC--HHHHHHHHHHHhcCH
Confidence 998532 23589999999999999876555554 22 3455666554 578999999988766
No 151
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.24 E-value=8.5e-05 Score=86.06 Aligned_cols=88 Identities=13% Similarity=0.049 Sum_probs=61.7
Q ss_pred CCCcEEEEeCCCCCCCCCCeEECCCCCC---HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHH
Q 002206 245 PSGWKCLVCGASDSQLPPNFIKLPKDAY---TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLR 317 (953)
Q Consensus 245 ~~~~~~vv~G~~~~~lp~NV~v~~~~~~---~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA 317 (953)
++++.++++|...+..++++..+++..+ ++++|+.+|+||..+ -.++++||+++|+|+|+.+.++..|
T Consensus 269 ~~~~~L~ivG~g~~~~~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~E----- 343 (405)
T PRK10125 269 GDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAARE----- 343 (405)
T ss_pred CCCeEEEEEcCCCcccccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHH-----
Confidence 4567888888754444567877777543 457889999999643 2358999999999999998654322
Q ss_pred HHHHHcCcEEEEecCCCChhhHHH
Q 002206 318 NMLEFYQGGVEMIRRDLLTGHWKP 341 (953)
Q Consensus 318 ~~l~~~G~g~~l~~~dl~~~~l~~ 341 (953)
+...+.|+.++..|. +.|..
T Consensus 344 --iv~~~~G~lv~~~d~--~~La~ 363 (405)
T PRK10125 344 --VLQKSGGKTVSEEEV--LQLAQ 363 (405)
T ss_pred --hEeCCcEEEECCCCH--HHHHh
Confidence 233457999987764 35554
No 152
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.24 E-value=0.00014 Score=83.61 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=87.5
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch---HhHHHh---hC--CCCcEEEEeCCCCC------------------CCCCCe
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS------------------QLPPNF 264 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~~~---~~ll~~---ll--~~~~~~vv~G~~~~------------------~lp~NV 264 (953)
+..++.+++++++ .++++.|..... ..++++ +. .+++.+++.|.... .++.++
T Consensus 181 ~~~~~~~~~~~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v 259 (380)
T PRK15484 181 PNLRQQLNISPDE-TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRC 259 (380)
T ss_pred HHHHHHhCCCCCC-eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcE
Confidence 4556677765444 556777877652 223333 21 25678888775321 135678
Q ss_pred EECCCCC--CHHHHHhhcCEEEecC----Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE-ecCCCCh
Q 002206 265 IKLPKDA--YTPDFMAASDCMLGKI----GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM-IRRDLLT 336 (953)
Q Consensus 265 ~v~~~~~--~~pdlLa~aDlfIthg----G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l-~~~dl~~ 336 (953)
.++++.+ .++++|+.+|+||... |+ .++.|||++|+|+|+...++. .+.++....|..+ +..+ +
T Consensus 260 ~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~------~Eiv~~~~~G~~l~~~~d--~ 331 (380)
T PRK15484 260 IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGI------TEFVLEGITGYHLAEPMT--S 331 (380)
T ss_pred EEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCc------HhhcccCCceEEEeCCCC--H
Confidence 8888764 4678999999999643 32 578899999999999875433 3345555667644 4433 6
Q ss_pred hhHHHHHHHHHhCC
Q 002206 337 GHWKPYLERAISLK 350 (953)
Q Consensus 337 ~~l~~al~~ll~~~ 350 (953)
+.+.++|.++++++
T Consensus 332 ~~la~~I~~ll~d~ 345 (380)
T PRK15484 332 DSIISDINRTLADP 345 (380)
T ss_pred HHHHHHHHHHHcCH
Confidence 79999999999876
No 153
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.23 E-value=7.5e-05 Score=86.43 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=69.8
Q ss_pred CCcEEEEeCCCCCC------CCCCeEECCCCCCHHHHHhhcCEEEe--c--CCh-hHHHHHHHcCCcEEEEeCCCCCchH
Q 002206 246 SGWKCLVCGASDSQ------LPPNFIKLPKDAYTPDFMAASDCMLG--K--IGY-GTVSEALAYKLPFVFVRRDYFNEEP 314 (953)
Q Consensus 246 ~~~~~vv~G~~~~~------lp~NV~v~~~~~~~pdlLa~aDlfIt--h--gG~-~Tv~Eal~~GvP~l~iP~~~~~DQ~ 314 (953)
+++.+++.|..... ..+||++.|+++.++.+|+.+|+||. + .|. +.+.|||++|+|+|+.+.. .+.
T Consensus 258 p~~~l~ivG~g~~~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~--~~~- 334 (397)
T TIGR03087 258 PAAEFYIVGAKPSPAVRALAALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEA--AEG- 334 (397)
T ss_pred CCcEEEEECCCChHHHHHhccCCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcc--ccc-
Confidence 57788888876421 35789999998888899999999994 2 243 3699999999999998742 221
Q ss_pred HHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 315 FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 315 ~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
..+..|.|+.+. . +++++.++|.++++++
T Consensus 335 ----i~~~~~~g~lv~-~--~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 335 ----IDALPGAELLVA-A--DPADFAAAILALLANP 363 (397)
T ss_pred ----ccccCCcceEeC-C--CHHHHHHHHHHHHcCH
Confidence 112346677765 3 3678999999999776
No 154
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.23 E-value=0.00014 Score=85.09 Aligned_cols=82 Identities=9% Similarity=0.028 Sum_probs=63.4
Q ss_pred CCcEEEEeCCCCC-----------CCCCCeEECCCCCCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCC
Q 002206 246 SGWKCLVCGASDS-----------QLPPNFIKLPKDAYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYF 310 (953)
Q Consensus 246 ~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~ 310 (953)
+++.+++.|.... .+.++|++.++.++++++|+.+|+||... | .+++.||+++|+|+|+...++
T Consensus 428 pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG- 506 (578)
T PRK15490 428 PATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGG- 506 (578)
T ss_pred CCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCC-
Confidence 5678888886542 14588999999888999999999999642 3 358999999999999987543
Q ss_pred CchHHHHHHHHHcCcEEEEecCC
Q 002206 311 NEEPFLRNMLEFYQGGVEMIRRD 333 (953)
Q Consensus 311 ~DQ~~NA~~l~~~G~g~~l~~~d 333 (953)
+.+.+.....|..++..|
T Consensus 507 -----~~EiV~dG~nG~LVp~~D 524 (578)
T PRK15490 507 -----SAECFIEGVSGFILDDAQ 524 (578)
T ss_pred -----cHHHcccCCcEEEECCCC
Confidence 344466777898888765
No 155
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.22 E-value=6.8e-05 Score=84.75 Aligned_cols=292 Identities=19% Similarity=0.197 Sum_probs=155.7
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccc-cChHHHHHHHHHHhh
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSETAV 100 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 100 (953)
+.|.-.| -.-...|+++|.++.-++.|.+-....+...... . .++.. .++ +.....+..+..+
T Consensus 4 ~AGE~SG-D~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~-~-------l~d~~-----~lsvmG~~Evl~~l~~~-- 67 (373)
T PF02684_consen 4 SAGEASG-DLHGARLIRALKARDPDIEFYGVGGPRMQAAGVE-S-------LFDME-----ELSVMGFVEVLKKLPKL-- 67 (373)
T ss_pred EeeCccH-HHHHHHHHHHHHhhCCCcEEEEEechHHHhCCCc-e-------ecchH-----HhhhccHHHHHHHHHHH--
Confidence 4555444 3446788999999988888875543222222111 0 01111 011 1122223333332
Q ss_pred ccHHHHHHHHHHHHHcCCCcEEE-ECCCchHHHHHH---HhCCc--EEEE-ecCChhHHHHHHHhhhccchHHHHHHHHh
Q 002206 101 APRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAA---DAGIR--SVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (953)
Q Consensus 101 ~~~~~~~~~~~~~L~~~kpDlVV-~D~~~~~~~~A~---~~giP--~I~i-s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (953)
.....+..+.+.+.+||+|| .|++...+.+|+ ..|+| +|.+ +.-.|.+--. .. ..+..
T Consensus 68 ---~~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvWAWr~~-R~-----------~~i~~ 132 (373)
T PF02684_consen 68 ---KRLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVWAWRPG-RA-----------KKIKK 132 (373)
T ss_pred ---HHHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCceeeeCcc-HH-----------HHHHH
Confidence 23455667788999999998 788666666554 55777 6654 4433431100 00 00111
Q ss_pred hccccceEEe-cCCCCCC--CCCCceeecCc-ccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCchH-----hHHHh
Q 002206 174 DYSHCEFLIR-LPGYCPM--PAFRDVIDVPL-VVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAGW-----KLKEE 242 (953)
Q Consensus 174 ~~~~~~~l~~-~~~~~~~--p~~~~v~~vg~-~~~--~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~~-----~ll~~ 242 (953)
. .|.++. .|++.+. ..-.++++||- ..+ .+...+.+.++.+ +++++++|.+--||-.... .+++.
T Consensus 133 ~---~D~ll~ifPFE~~~y~~~g~~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~a 208 (373)
T PF02684_consen 133 Y---VDHLLVIFPFEPEFYKKHGVPVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEA 208 (373)
T ss_pred H---HhheeECCcccHHHHhccCCCeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHH
Confidence 0 111221 2222110 00023455553 222 2333456667777 7778899999999876531 12221
Q ss_pred ---hC--CCCcEEEEeCCCCC--C--------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 002206 243 ---YL--PSGWKCLVCGASDS--Q--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (953)
Q Consensus 243 ---ll--~~~~~~vv~G~~~~--~--------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~ 307 (953)
+. .++.++++...... . .+.++.+.-......++|++||+.+..+| +.|.|++.+|+|||++-.
T Consensus 209 a~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~al~~SG-TaTLE~Al~g~P~Vv~Yk 287 (373)
T PF02684_consen 209 AKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMAAADAALAASG-TATLEAALLGVPMVVAYK 287 (373)
T ss_pred HHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcchhhcCC-HHHHHHHHhCCCEEEEEc
Confidence 21 25666666533221 1 12333222112233499999999999999 899999999999999864
Q ss_pred CCCCchHHHHHHHHHcCcEEEE------------ecCCCChhhHHHHHHHHHhCC
Q 002206 308 DYFNEEPFLRNMLEFYQGGVEM------------IRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 308 ~~~~DQ~~NA~~l~~~G~g~~l------------~~~dl~~~~l~~al~~ll~~~ 350 (953)
.. .=....++++.+..+--.. -.++.+++.+..++.+++.|+
T Consensus 288 ~~-~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~ 341 (373)
T PF02684_consen 288 VS-PLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP 341 (373)
T ss_pred Cc-HHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH
Confidence 32 2234577888776552111 123456667777777777655
No 156
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.21 E-value=0.00045 Score=78.12 Aligned_cols=125 Identities=21% Similarity=0.201 Sum_probs=78.6
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHhh--CCCCcEEEEeCCCCC------------CCCCCeEECCCCCC--
Q 002206 212 EVRKELGIEDDVKLLILNFGGQPAG--W-KLKEEY--LPSGWKCLVCGASDS------------QLPPNFIKLPKDAY-- 272 (953)
Q Consensus 212 e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~l--l~~~~~~vv~G~~~~------------~lp~NV~v~~~~~~-- 272 (953)
+.++.++..+ .+. +++.|+.... . .+++.+ +..++.++++|.... .+.++|++.++++.
T Consensus 183 ~~~~~~~~~~-~~~-i~~~G~~~~~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~ 260 (363)
T cd04955 183 EILKKYGLEP-GRY-YLLVGRIVPENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQE 260 (363)
T ss_pred hhHHhcCCCC-CcE-EEEEecccccCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHH
Confidence 3444555443 333 4567876652 2 233332 234677888886421 13578999887643
Q ss_pred HHHHHhhcCEEEecC----Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHH
Q 002206 273 TPDFMAASDCMLGKI----GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 273 ~pdlLa~aDlfIthg----G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll 347 (953)
+.+++..+|+++.+. |+ +++.||+++|+|+|+...+...|. ++. .|..++..+ .+.++|.+++
T Consensus 261 ~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~------~~~--~g~~~~~~~----~l~~~i~~l~ 328 (363)
T cd04955 261 LLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREV------LGD--KAIYFKVGD----DLASLLEELE 328 (363)
T ss_pred HHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcccee------ecC--CeeEecCch----HHHHHHHHHH
Confidence 447888899998654 22 479999999999999886555544 222 344454433 2888999998
Q ss_pred hCC
Q 002206 348 SLK 350 (953)
Q Consensus 348 ~~~ 350 (953)
+++
T Consensus 329 ~~~ 331 (363)
T cd04955 329 ADP 331 (363)
T ss_pred hCH
Confidence 776
No 157
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism]
Probab=98.18 E-value=6.1e-06 Score=84.55 Aligned_cols=54 Identities=19% Similarity=0.350 Sum_probs=48.6
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhcc
Q 002206 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENH 683 (953)
Q Consensus 630 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~ 683 (953)
.+-++.+.+-||.|+|+|||++..++.....+...++.+++.....++..+|++
T Consensus 93 ~~Tk~hvtNPiplgrGigssgta~~aGv~l~ne~a~LGlsk~~mldy~lmierh 146 (355)
T KOG1537|consen 93 ITTKKHVTNPIPLGRGIGSSGTAKMAGVRLVNESADLGLSKGSMLDYSLMIERH 146 (355)
T ss_pred cceeeeecCCccccccccchhhhhhhhheecchHhhcCCccccchhHHHHHhhC
Confidence 456889999999999999999999999999888888899998888888888886
No 158
>PRK14099 glycogen synthase; Provisional
Probab=98.17 E-value=0.00074 Score=80.08 Aligned_cols=133 Identities=19% Similarity=0.162 Sum_probs=81.7
Q ss_pred HHHHHHhCCCCC-CcEEEEEcCCCCch--Hh-HHH---hhCCCCcEEEEeCCCCC-----------CCCCCe-EECCCCC
Q 002206 211 KEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDS-----------QLPPNF-IKLPKDA 271 (953)
Q Consensus 211 ~e~~~~l~~~~~-~~vVlvs~Gs~~~~--~~-ll~---~ll~~~~~~vv~G~~~~-----------~lp~NV-~v~~~~~ 271 (953)
+.+++.++++.+ ...++.+.|..... .. +++ .+...++.+++.|.... ..+.++ .+.+|.+
T Consensus 281 ~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~ 360 (485)
T PRK14099 281 AALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDE 360 (485)
T ss_pred HHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCH
Confidence 457788888643 23455566776652 22 223 23334677888876541 135666 5678876
Q ss_pred CHHHHH-hhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH-H--HcCcEEEEecCCCChhhHHHHH
Q 002206 272 YTPDFM-AASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNML-E--FYQGGVEMIRRDLLTGHWKPYL 343 (953)
Q Consensus 272 ~~pdlL-a~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l-~--~~G~g~~l~~~dl~~~~l~~al 343 (953)
.++.++ +.+|+||.-. | ..+.+||+++|+|.|+....+..|.-...... + ..+.|+.++..+ ++.|.++|
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d--~~~La~ai 438 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT--ADALAAAL 438 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC--HHHHHHHH
Confidence 777776 5699999632 2 25889999999877776654544431111000 1 015688888765 56888888
Q ss_pred HH
Q 002206 344 ER 345 (953)
Q Consensus 344 ~~ 345 (953)
.+
T Consensus 439 ~~ 440 (485)
T PRK14099 439 RK 440 (485)
T ss_pred HH
Confidence 87
No 159
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.14 E-value=0.00038 Score=87.06 Aligned_cols=83 Identities=17% Similarity=0.141 Sum_probs=62.4
Q ss_pred CCCCeEECCCC--CCHHHHHhhc----CEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEE
Q 002206 260 LPPNFIKLPKD--AYTPDFMAAS----DCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (953)
Q Consensus 260 lp~NV~v~~~~--~~~pdlLa~a----DlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l 329 (953)
+.++|.+.++. ..+|++|+.+ |+||..+ |+ .++.||++||+|+|+....+..| .++....|+.+
T Consensus 546 L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~E------II~~g~nGlLV 619 (1050)
T TIGR02468 546 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVD------IHRVLDNGLLV 619 (1050)
T ss_pred CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHH------HhccCCcEEEE
Confidence 35678887764 4578899876 6999753 33 58999999999999987544333 35555678888
Q ss_pred ecCCCChhhHHHHHHHHHhCC
Q 002206 330 IRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 330 ~~~dl~~~~l~~al~~ll~~~ 350 (953)
+..+ ++.|.++|.++++++
T Consensus 620 dP~D--~eaLA~AL~~LL~Dp 638 (1050)
T TIGR02468 620 DPHD--QQAIADALLKLVADK 638 (1050)
T ss_pred CCCC--HHHHHHHHHHHhhCH
Confidence 8766 468999999999876
No 160
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.13 E-value=0.00022 Score=84.12 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=122.7
Q ss_pred HHHHHHHHHHcCCCcEEE-ECCCchHHHH---HHHhCC--cEEEE-ecCChhHHHHHHHhhhccchHHHHHHHHhhcccc
Q 002206 106 ILKDEVEWLNSIKADLVV-SDVVPVACRA---AADAGI--RSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHC 178 (953)
Q Consensus 106 ~~~~~~~~L~~~kpDlVV-~D~~~~~~~~---A~~~gi--P~I~i-s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 178 (953)
..++..+.+++.+||+|| .|++...+.+ +++.|+ |+|.+ +.-.|.+--. ... ......+.+.
T Consensus 298 ~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR~~-Rik----ki~k~vD~ll------ 366 (608)
T PRK01021 298 RYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWRPK-RKT----ILEKYLDLLL------ 366 (608)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcc-hHH----HHHHHhhhhe------
Confidence 455667788889999999 5875444444 455675 98876 3333431100 000 0011111111
Q ss_pred ceEEecCCCCCC--CCCCceeecCc-cccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCch-H----hHHHh----hC
Q 002206 179 EFLIRLPGYCPM--PAFRDVIDVPL-VVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEE----YL 244 (953)
Q Consensus 179 ~~l~~~~~~~~~--p~~~~v~~vg~-~~~~--~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~----~ll~~----ll 244 (953)
.-.|++.+. ..-.++++||= ..+. ....++++++.+++++++++|.+--||-... . -+++. .+
T Consensus 367 ---~IfPFE~~~y~~~gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l 443 (608)
T PRK01021 367 ---LILPFEQNLFKDSPLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSL 443 (608)
T ss_pred ---ecCccCHHHHHhcCCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHh
Confidence 112222110 00123445553 2221 2345677888999877889999999987653 1 12221 22
Q ss_pred CCCcEEEEeCCCCC--C-----C---C-CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCch
Q 002206 245 PSGWKCLVCGASDS--Q-----L---P-PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEE 313 (953)
Q Consensus 245 ~~~~~~vv~G~~~~--~-----l---p-~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ 313 (953)
..+.++++...... + + + .++.+..- ..-.++|++||+.+..+| +.+.|++.+|+|||++-.... =-
T Consensus 444 ~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~-~~~~~~m~aaD~aLaaSG-TaTLEaAL~g~PmVV~YK~s~-Lt 520 (608)
T PRK01021 444 ASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPS-QFRYELMRECDCALAKCG-TIVLETALNQTPTIVTCQLRP-FD 520 (608)
T ss_pred ccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecC-cchHHHHHhcCeeeecCC-HHHHHHHHhCCCEEEEEecCH-HH
Confidence 23456665432211 1 1 1 12333321 113599999999999999 889999999999999864322 12
Q ss_pred HHHHHHHHHc--C-cE-------EE-----Ee-cCCCChhhHHHHHHHHHhCC
Q 002206 314 PFLRNMLEFY--Q-GG-------VE-----MI-RRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 314 ~~NA~~l~~~--G-~g-------~~-----l~-~~dl~~~~l~~al~~ll~~~ 350 (953)
...++++.+. . ++ .. +. .++.+++.+.+++ +++.|+
T Consensus 521 y~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~ 572 (608)
T PRK01021 521 TFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTS 572 (608)
T ss_pred HHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCH
Confidence 3466777661 1 11 11 11 2455677777775 666555
No 161
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism]
Probab=98.10 E-value=0.0009 Score=71.15 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=45.6
Q ss_pred CCCCchHHHHHHHHHHHHHHHhCC----------CCCH---HHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEe
Q 002206 643 GKGVSSSASVEVASMSAIAAAHGL----------NIHP---RDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 709 (953)
Q Consensus 643 g~GLgSSAA~~va~~~al~~~~~~----------~l~~---~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~ 709 (953)
..|||||||++.++..+++..+|. +++. +-+-.+||.+-=..+|+-+..-|-.+++||.. .+-.
T Consensus 152 KTGLGSSAam~T~lv~~ll~sl~~~~~d~~~k~~k~d~s~~~viHnlAQ~aHC~AQGKvGSGFDV~aA~yGS~---rYrR 228 (459)
T KOG4519|consen 152 KTGLGSSAAMTTALVAALLHSLGVVDLDDPCKEGKFDCSDLDVIHNLAQTAHCLAQGKVGSGFDVSAAVYGSQ---RYRR 228 (459)
T ss_pred ccCccchHHHHHHHHHHHHHhhcceecCCCccccccCchHHHHHHHHHHHHHHHhcCCccCCcceehhhccce---eeee
Confidence 589999999999999888888764 1333 23345566554445666544469999999984 4444
Q ss_pred ecC
Q 002206 710 CQP 712 (953)
Q Consensus 710 ~~~ 712 (953)
|.|
T Consensus 229 F~P 231 (459)
T KOG4519|consen 229 FSP 231 (459)
T ss_pred CCH
Confidence 544
No 162
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.09 E-value=0.00012 Score=86.80 Aligned_cols=224 Identities=16% Similarity=0.150 Sum_probs=121.8
Q ss_pred HHHHHHHHcCCCcEEEECC----Cch--HHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHH----HHH-HHHhhcc
Q 002206 108 KDEVEWLNSIKADLVVSDV----VPV--ACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRS----IVW-QIAEDYS 176 (953)
Q Consensus 108 ~~~~~~L~~~kpDlVV~D~----~~~--~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~----~~~-~l~~~~~ 176 (953)
.+..+.|.+++||+|+... ... +..+|++++ |+|++-+..+..+...|-.. ..+. ..+ ++...|
T Consensus 424 gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g---~L~~~llk~l~~~v~r~h- 498 (794)
T PLN02501 424 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNG---ALQAFFVKHINNWVTRAY- 498 (794)
T ss_pred HHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcch---hHHHHHHHHHHHHHHHhh-
Confidence 4456778899999999875 233 566899999 88765332222222222110 1111 111 222333
Q ss_pred ccceEEecCCC---CCCCCCCceeecCcccccCCCC-hHHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHhh---C--
Q 002206 177 HCEFLIRLPGY---CPMPAFRDVIDVPLVVRRLHKS-RKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEEY---L-- 244 (953)
Q Consensus 177 ~~~~l~~~~~~---~~~p~~~~v~~vg~~~~~~~~~-~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~l---l-- 244 (953)
|+..+..+.. .+...+.++ .|+......+. +...++.++.....+. .++.|.+... . .++.++ .
T Consensus 499 -cD~VIaPS~atq~L~~~vI~nV--nGVDte~F~P~~r~~~~r~lgi~~~~kg-iLfVGRLa~EKGld~LLeAla~L~~~ 574 (794)
T PLN02501 499 -CHKVLRLSAATQDLPKSVICNV--HGVNPKFLKIGEKVAEERELGQQAFSKG-AYFLGKMVWAKGYRELIDLLAKHKNE 574 (794)
T ss_pred -CCEEEcCCHHHHHhcccceeec--ccccccccCCcchhHHHHhcCCccccCc-eEEEEcccccCCHHHHHHHHHHHHhh
Confidence 6766653211 111111122 24433322221 2222345555322222 2345666542 2 233322 1
Q ss_pred CCCcEEEEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCC
Q 002206 245 PSGWKCLVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFN 311 (953)
Q Consensus 245 ~~~~~~vv~G~~~~~---------lp~NV~v~~~~~~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~ 311 (953)
.+++.++++|.++.. +.-++.++++.++.+++|+.+|+||.-+ | .+++.||+++|+|+|+...++ .
T Consensus 575 ~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG-~ 653 (794)
T PLN02501 575 LDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPS-N 653 (794)
T ss_pred CCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCC-C
Confidence 246788888876521 2335777788777778999999999643 3 358999999999999988643 2
Q ss_pred chHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 312 EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 312 DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
+. +...+.|... . +.+.+.++|.+++.+++
T Consensus 654 e~------V~~g~nGll~--~--D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 654 EF------FRSFPNCLTY--K--TSEDFVAKVKEALANEP 683 (794)
T ss_pred ce------EeecCCeEec--C--CHHHHHHHHHHHHhCch
Confidence 11 2222333322 2 35788999999998764
No 163
>PLN02316 synthase/transferase
Probab=98.08 E-value=0.0016 Score=81.89 Aligned_cols=136 Identities=17% Similarity=0.082 Sum_probs=85.1
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCc--hHhHH-Hh---hCCCCcEEEEeCCCCC----------------CCCCCeEECC
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQPA--GWKLK-EE---YLPSGWKCLVCGASDS----------------QLPPNFIKLP 268 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~~--~~~ll-~~---ll~~~~~~vv~G~~~~----------------~lp~NV~v~~ 268 (953)
..+++.++++.....+++..|.+.. +..++ .+ ++..+.+++++|..+. ..+.+|.+..
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g 906 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCL 906 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEe
Confidence 4577888987433346667787765 23333 22 3445677888876521 0245677653
Q ss_pred CCCC-HH-HHHhhcCEEEecC-----ChhHHHHHHHcCCcEEEEeCCCCCchHHHH-------HHHHHcCcEEEEecCCC
Q 002206 269 KDAY-TP-DFMAASDCMLGKI-----GYGTVSEALAYKLPFVFVRRDYFNEEPFLR-------NMLEFYQGGVEMIRRDL 334 (953)
Q Consensus 269 ~~~~-~p-dlLa~aDlfIthg-----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA-------~~l~~~G~g~~l~~~dl 334 (953)
..+. +. .+++.+|+|+..+ | .+.+|||++|+|.|+...++..|..... +.-...+.|+.++..+
T Consensus 907 ~~de~lah~iyaaADiflmPS~~EP~G-LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d- 984 (1036)
T PLN02316 907 TYDEPLSHLIYAGADFILVPSIFEPCG-LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD- 984 (1036)
T ss_pred cCCHHHHHHHHHhCcEEEeCCcccCcc-HHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC-
Confidence 3332 22 6889999999643 4 6999999999999987765555442111 0000125688887655
Q ss_pred ChhhHHHHHHHHHhC
Q 002206 335 LTGHWKPYLERAISL 349 (953)
Q Consensus 335 ~~~~l~~al~~ll~~ 349 (953)
++.+..+|.+++.+
T Consensus 985 -~~aLa~AL~raL~~ 998 (1036)
T PLN02316 985 -AAGVDYALNRAISA 998 (1036)
T ss_pred -HHHHHHHHHHHHhh
Confidence 56888999998864
No 164
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.05 E-value=0.00011 Score=76.79 Aligned_cols=53 Identities=23% Similarity=0.021 Sum_probs=38.9
Q ss_pred CCCeEECCCC---CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCch
Q 002206 261 PPNFIKLPKD---AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEE 313 (953)
Q Consensus 261 p~NV~v~~~~---~~~pdlLa~aDlfIthgG----~~Tv~Eal~~GvP~l~iP~~~~~DQ 313 (953)
.+|+.+.++. ..++.+++.||++|+... .++++||+++|+|+|+.+.+...|.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~ 219 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEI 219 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceE
Confidence 4567766653 223356666999998774 5799999999999999986655543
No 165
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.01 E-value=0.0001 Score=83.53 Aligned_cols=117 Identities=17% Similarity=0.072 Sum_probs=82.6
Q ss_pred EEEEcCCCCch---HhHHHhhCCCCcEEEEeCCCCC------CCCCCeEECCCCCC--HHHHHhhcCEEEec--CCh-hH
Q 002206 226 LILNFGGQPAG---WKLKEEYLPSGWKCLVCGASDS------QLPPNFIKLPKDAY--TPDFMAASDCMLGK--IGY-GT 291 (953)
Q Consensus 226 Vlvs~Gs~~~~---~~ll~~ll~~~~~~vv~G~~~~------~lp~NV~v~~~~~~--~pdlLa~aDlfIth--gG~-~T 291 (953)
.+++.|..... ..+++.+....+.++++|.... ..++||+++++++. ++++|+.||++|.. -|+ .+
T Consensus 197 ~il~~G~~~~~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~ 276 (351)
T cd03804 197 YYLSVGRLVPYKRIDLAIEAFNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIV 276 (351)
T ss_pred EEEEEEcCccccChHHHHHHHHHCCCcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCch
Confidence 45667776653 2334433222267778876542 15789999998865 67899999999953 233 46
Q ss_pred HHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 292 v~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
+.||+++|+|+|+...++..|. ++..+.|+.++..+ ++.+.++|.++++++
T Consensus 277 ~~Eama~G~Pvi~~~~~~~~e~------i~~~~~G~~~~~~~--~~~la~~i~~l~~~~ 327 (351)
T cd03804 277 PVEAMASGTPVIAYGKGGALET------VIDGVTGILFEEQT--VESLAAAVERFEKNE 327 (351)
T ss_pred HHHHHHcCCCEEEeCCCCCcce------eeCCCCEEEeCCCC--HHHHHHHHHHHHhCc
Confidence 8899999999999886554444 55667898887665 467899999999877
No 166
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=97.99 E-value=0.00076 Score=80.03 Aligned_cols=137 Identities=20% Similarity=0.127 Sum_probs=85.1
Q ss_pred HHHHHHhCCC-CCCcEEEEEcCCCCch--Hh-HHH---hhCCCCcEEEEeCCCCCC-----------CCCCeEEC-CCCC
Q 002206 211 KEVRKELGIE-DDVKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ-----------LPPNFIKL-PKDA 271 (953)
Q Consensus 211 ~e~~~~l~~~-~~~~vVlvs~Gs~~~~--~~-ll~---~ll~~~~~~vv~G~~~~~-----------lp~NV~v~-~~~~ 271 (953)
..+++.++++ .+...++++.|..... .. +++ .+...++.+++.|..... .+.|+.++ ++..
T Consensus 282 ~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~ 361 (476)
T cd03791 282 AALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDE 361 (476)
T ss_pred HHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCH
Confidence 4567788874 2334467777877652 22 222 232334678888765421 35787754 4433
Q ss_pred C-HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 272 Y-TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 272 ~-~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
. ++.+++.+|+++... | ..+.+||+++|+|+|+...++..|.-.+...-...|.|+.++..+ ++.+.++|.++
T Consensus 362 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~--~~~l~~~i~~~ 439 (476)
T cd03791 362 ALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN--ADALLAALRRA 439 (476)
T ss_pred HHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC--HHHHHHHHHHH
Confidence 2 347889999999532 2 257899999999999987665555411111011234788888665 56888999988
Q ss_pred HhC
Q 002206 347 ISL 349 (953)
Q Consensus 347 l~~ 349 (953)
+++
T Consensus 440 l~~ 442 (476)
T cd03791 440 LAL 442 (476)
T ss_pred HHH
Confidence 754
No 167
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.94 E-value=0.0022 Score=74.82 Aligned_cols=118 Identities=14% Similarity=0.035 Sum_probs=75.7
Q ss_pred cEEEEEcCCCCch--H-hHHHh---h---CC----CCcEEEEeCCCCC-----------------CCCCCeEECCCCC--
Q 002206 224 KLLILNFGGQPAG--W-KLKEE---Y---LP----SGWKCLVCGASDS-----------------QLPPNFIKLPKDA-- 271 (953)
Q Consensus 224 ~vVlvs~Gs~~~~--~-~ll~~---l---l~----~~~~~vv~G~~~~-----------------~lp~NV~v~~~~~-- 271 (953)
..++++.|..... . .++++ + .+ +++++++.|.... .+.++|+++++.+
T Consensus 237 ~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~ 316 (419)
T cd03806 237 ENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFE 316 (419)
T ss_pred CcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHH
Confidence 4577788866542 1 22222 2 12 2477888875420 1457899888754
Q ss_pred CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHH---HcCcEEEEecCCCChhhHHHHHH
Q 002206 272 YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEMIRRDLLTGHWKPYLE 344 (953)
Q Consensus 272 ~~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~---~~G~g~~l~~~dl~~~~l~~al~ 344 (953)
.++.+|+.||++|... |+ .++.|||++|+|+|+....+-.+ ..++ ....|.... +++++.++|.
T Consensus 317 ~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~-----~iv~~~~~g~~G~l~~----d~~~la~ai~ 387 (419)
T cd03806 317 ELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLL-----DIVVPWDGGPTGFLAS----TAEEYAEAIE 387 (419)
T ss_pred HHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCch-----heeeccCCCCceEEeC----CHHHHHHHHH
Confidence 4558999999998532 22 48899999999999976322111 1122 345677652 4689999999
Q ss_pred HHHhCC
Q 002206 345 RAISLK 350 (953)
Q Consensus 345 ~ll~~~ 350 (953)
++++++
T Consensus 388 ~ll~~~ 393 (419)
T cd03806 388 KILSLS 393 (419)
T ss_pred HHHhCC
Confidence 999866
No 168
>PLN00142 sucrose synthase
Probab=97.88 E-value=0.0013 Score=80.74 Aligned_cols=125 Identities=17% Similarity=0.171 Sum_probs=73.9
Q ss_pred HHhCC-CCCCcEEEEEcCCCCch--H-hHHHhh-----CCCCcEEEEeCCC-CC----------------------CCCC
Q 002206 215 KELGI-EDDVKLLILNFGGQPAG--W-KLKEEY-----LPSGWKCLVCGAS-DS----------------------QLPP 262 (953)
Q Consensus 215 ~~l~~-~~~~~vVlvs~Gs~~~~--~-~ll~~l-----l~~~~~~vv~G~~-~~----------------------~lp~ 262 (953)
+.++. .+....++++.|..... . .+++++ ..+++.++++|.. .+ .+.+
T Consensus 563 e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~ 642 (815)
T PLN00142 563 EHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKG 642 (815)
T ss_pred HHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCC
Confidence 44554 12233467888877652 2 233332 2245667766543 10 1346
Q ss_pred CeEECCCCC-C--HHH---HHh-hcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEec
Q 002206 263 NFIKLPKDA-Y--TPD---FMA-ASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIR 331 (953)
Q Consensus 263 NV~v~~~~~-~--~pd---lLa-~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~ 331 (953)
+|.++++.. . .++ +++ ++|+||.-+ |+ .++.||++||+|+|+...++ ..+.++....|..++.
T Consensus 643 ~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG------~~EIV~dG~tG~LV~P 716 (815)
T PLN00142 643 QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG------PAEIIVDGVSGFHIDP 716 (815)
T ss_pred cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC------HHHHhcCCCcEEEeCC
Confidence 787766532 1 123 344 479999643 33 48999999999999987443 3344555567999987
Q ss_pred CCCChhhHHHHHHHHH
Q 002206 332 RDLLTGHWKPYLERAI 347 (953)
Q Consensus 332 ~dl~~~~l~~al~~ll 347 (953)
.+ ++.+.++|.+++
T Consensus 717 ~D--~eaLA~aI~~lL 730 (815)
T PLN00142 717 YH--GDEAANKIADFF 730 (815)
T ss_pred CC--HHHHHHHHHHHH
Confidence 66 356777776544
No 169
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]
Probab=97.86 E-value=0.00039 Score=73.56 Aligned_cols=62 Identities=26% Similarity=0.382 Sum_probs=54.0
Q ss_pred CEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCc
Q 002206 631 SISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (953)
Q Consensus 631 g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~ 702 (953)
.+.|.-.++.|..+||.||||=-.|++.||+.+++++.+++++..+|... .|..|- ++|||.
T Consensus 105 ~lHI~S~nNFPtAAGLASSAAG~Aalv~alarly~l~~~~~els~iAR~G----SGSACR------Sl~GG~ 166 (395)
T KOG2833|consen 105 KLHIASVNNFPTAAGLASSAAGFAALVLALARLYGLDDSPEELSRIARQG----SGSACR------SLYGGF 166 (395)
T ss_pred eEEEEecCCCcchhhhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHhcc----Cchhhh------hhhcce
Confidence 46777788999999999999999999999999999999999999998864 355543 899994
No 170
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.83 E-value=0.0065 Score=69.43 Aligned_cols=212 Identities=16% Similarity=0.132 Sum_probs=110.6
Q ss_pred HHHHHHHHHcCCCcEEEECC----CchHHHHHHHhCCcEEEEec--CChh---HHHHHHHhhhccchHHHHHHHH-hhcc
Q 002206 107 LKDEVEWLNSIKADLVVSDV----VPVACRAAADAGIRSVCVTN--FSWD---FIYAEYVMAAGHHHRSIVWQIA-EDYS 176 (953)
Q Consensus 107 ~~~~~~~L~~~kpDlVV~D~----~~~~~~~A~~~giP~I~is~--~~~~---~~~~~~~~~~~~~~~~~~~~l~-~~~~ 176 (953)
+....+.+.+++||+|++.. ..++.++|..++||++-+.. ..+. ...+.. ...+. ..+.
T Consensus 82 ~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~~~~eE~~r~~-----------i~~la~l~f~ 150 (365)
T TIGR03568 82 IIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEGAIDESIRHA-----------ITKLSHLHFV 150 (365)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCCCCchHHHHHH-----------HHHHHhhccC
Confidence 34446678889999999754 34677889999999997621 2121 111111 11111 0110
Q ss_pred c----cceEEecCCCCCCCCCCceeecCc--ccc---cCCCChHHHHHHhCCCCCCcEEEEEcCCCC--c--hH----hH
Q 002206 177 H----CEFLIRLPGYCPMPAFRDVIDVPL--VVR---RLHKSRKEVRKELGIEDDVKLLILNFGGQP--A--GW----KL 239 (953)
Q Consensus 177 ~----~~~l~~~~~~~~~p~~~~v~~vg~--~~~---~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~--~--~~----~l 239 (953)
. .+.+++. ...+ .++..+|- ... .....++++.+.++++++++.|++.+-... . .. .+
T Consensus 151 ~t~~~~~~L~~e---g~~~--~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~l 225 (365)
T TIGR03568 151 ATEEYRQRVIQM---GEDP--DRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKEL 225 (365)
T ss_pred CCHHHHHHHHHc---CCCC--CcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHH
Confidence 0 0111110 0001 12322332 111 111234567778887645578778775322 1 11 22
Q ss_pred HHhhCC--CCcEEEEe-C-CCCCC--------C--CCCeEECCCCCCH--HHHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 002206 240 KEEYLP--SGWKCLVC-G-ASDSQ--------L--PPNFIKLPKDAYT--PDFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (953)
Q Consensus 240 l~~ll~--~~~~~vv~-G-~~~~~--------l--p~NV~v~~~~~~~--pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l 303 (953)
.+.+.. ..+.++.. + +.... . .+|+++.+..++. ..+|++|+++||-.+ +++.||.++|+|+|
T Consensus 226 i~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSS-ggi~EA~~lg~Pvv 304 (365)
T TIGR03568 226 LKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSS-SGIIEAPSFGVPTI 304 (365)
T ss_pred HHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcCh-hHHHhhhhcCCCEE
Confidence 233321 23433332 2 11110 1 4688887655432 378889999999885 34599999999999
Q ss_pred EEeCCCCCchHHHHHHHHHcCcEEE-EecCCCChhhHHHHHHHHH
Q 002206 304 FVRRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 304 ~iP~~~~~DQ~~NA~~l~~~G~g~~-l~~~dl~~~~l~~al~~ll 347 (953)
.+- ..+| ....|..+. +. ..++++.+++.+++
T Consensus 305 ~l~--~R~e-------~~~~g~nvl~vg---~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 305 NIG--TRQK-------GRLRADSVIDVD---PDKEEIVKAIEKLL 337 (365)
T ss_pred eec--CCch-------hhhhcCeEEEeC---CCHHHHHHHHHHHh
Confidence 875 2221 223444433 42 23567888888855
No 171
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism]
Probab=97.82 E-value=0.0017 Score=70.93 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 610 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
...++.++..+-++.|.. -.+.|...++.|.++||+||||...|+++|++.++++.++..++.++|..+ .|..|
T Consensus 71 ~~k~~~~ld~~R~~~~~~--~~~~i~s~n~~ptaaGLaSSaag~AAl~~Al~~~~~~~~d~~~lS~~AR~g----SGSa~ 144 (329)
T COG3407 71 NEKARRVLDRFRKEYGIS--FKVKIVSYNNFPTAAGLASSAAGAAALAAALNRLYDLDLDDEFLSRIARLG----SGSAS 144 (329)
T ss_pred HHHHHHHHHHHHHhhccc--ceEEEEEecCCCccccccccHHHHHHHHHHHHhhhccCCCHHHHHHHHHHh----ccchh
Confidence 455666666543355554 479999999999999999999999999999999999999999999999864 23332
Q ss_pred CccchhhhhccCc
Q 002206 690 GVMDQMASACGEA 702 (953)
Q Consensus 690 G~~D~~~~~~Gg~ 702 (953)
-+++||.
T Consensus 145 ------RS~~Gg~ 151 (329)
T COG3407 145 ------RSIFGGF 151 (329)
T ss_pred ------hhhcCCe
Confidence 4899995
No 172
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.70 E-value=0.0015 Score=77.44 Aligned_cols=120 Identities=14% Similarity=0.037 Sum_probs=82.5
Q ss_pred CcEEEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCC---------------CCCCCeEECCCCCCHHHHHhh
Q 002206 223 VKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS---------------QLPPNFIKLPKDAYTPDFMAA 279 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~---------------~lp~NV~v~~~~~~~pdlLa~ 279 (953)
.+.+++..|..... . .++++ +. .+++.++++|.... .+.+||++++ ...++++|+.
T Consensus 292 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~ 370 (475)
T cd03813 292 EPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPK 370 (475)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHh
Confidence 44567777877652 2 23332 21 25678888886521 1468999998 4568899999
Q ss_pred cCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc------CcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 280 SDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 280 aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~------G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
+|++|... -.+++.||+++|+|+|+...+. ..+.++.. ..|..++..+ ++.+.++|.+++++
T Consensus 371 aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~------~~elv~~~~~~~~g~~G~lv~~~d--~~~la~ai~~ll~~ 442 (475)
T cd03813 371 LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGS------CRELIEGADDEALGPAGEVVPPAD--PEALARAILRLLKD 442 (475)
T ss_pred CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCC------hHHHhcCCcccccCCceEEECCCC--HHHHHHHHHHHhcC
Confidence 99999543 2358999999999999976432 23344442 3688887666 46899999999987
Q ss_pred CC
Q 002206 350 KP 351 (953)
Q Consensus 350 ~~ 351 (953)
+.
T Consensus 443 ~~ 444 (475)
T cd03813 443 PE 444 (475)
T ss_pred HH
Confidence 63
No 173
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.69 E-value=0.0029 Score=72.58 Aligned_cols=115 Identities=20% Similarity=0.202 Sum_probs=75.4
Q ss_pred cEEEEEcCCCCch--HhHHHhh--CCCCcEEEEeCCCC--CC---C--CCCeEECCCCC--CHHHHHhhcCEEEec----
Q 002206 224 KLLILNFGGQPAG--WKLKEEY--LPSGWKCLVCGASD--SQ---L--PPNFIKLPKDA--YTPDFMAASDCMLGK---- 286 (953)
Q Consensus 224 ~vVlvs~Gs~~~~--~~ll~~l--l~~~~~~vv~G~~~--~~---l--p~NV~v~~~~~--~~pdlLa~aDlfIth---- 286 (953)
+.+++.+|+.... .+++.++ ..+++.++++|... .. + .+||+++++++ .+|.+|+++|++|.-
T Consensus 205 ~~~i~y~G~l~~~~d~~ll~~la~~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~ 284 (373)
T cd04950 205 RPVIGYYGAIAEWLDLELLEALAKARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLN 284 (373)
T ss_pred CCEEEEEeccccccCHHHHHHHHHHCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccc
Confidence 3466777877653 3444433 23678888888752 11 2 37999999874 578999999999852
Q ss_pred ----CC-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 287 ----IG-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 287 ----gG-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++ .+.+.|++++|+|+|..+.+ + ..+..+.+... .. ++++|.++|++++.+.
T Consensus 285 ~~~~~~~P~Kl~EylA~G~PVVat~~~---~------~~~~~~~~~~~-~~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 285 ELTRATSPLKLFEYLAAGKPVVATPLP---E------VRRYEDEVVLI-AD--DPEEFVAAIEKALLED 341 (373)
T ss_pred hhhhcCCcchHHHHhccCCCEEecCcH---H------HHhhcCcEEEe-CC--CHHHHHHHHHHHHhcC
Confidence 22 24689999999999987632 1 12223323333 33 4679999999977544
No 174
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.63 E-value=0.00014 Score=73.21 Aligned_cols=132 Identities=18% Similarity=0.137 Sum_probs=90.9
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHH---hhC---CCCcEEEEeCCCCC-----------CCCCCeEECCC
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYL---PSGWKCLVCGASDS-----------QLPPNFIKLPK 269 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~---~ll---~~~~~~vv~G~~~~-----------~lp~NV~v~~~ 269 (953)
++.++...+.+ +++.++++.|+.... . .++. .+. .+++.++++|.... .+..+++++++
T Consensus 2 ~~~~~~~~~~~-~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (172)
T PF00534_consen 2 KDKLREKLKIP-DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGY 80 (172)
T ss_dssp HHHHHHHTTT--TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEES
T ss_pred hHHHHHHcCCC-CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccc
Confidence 45566666664 556677777877663 1 2222 221 46678888884331 15678998877
Q ss_pred CC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 002206 270 DA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (953)
Q Consensus 270 ~~--~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al 343 (953)
.. .+.+++..+|++|.. +...++.||+++|+|+|+... ..+.+.+.....|..++.. +.+++.++|
T Consensus 81 ~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~------~~~~e~~~~~~~g~~~~~~--~~~~l~~~i 152 (172)
T PF00534_consen 81 VPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDI------GGNNEIINDGVNGFLFDPN--DIEELADAI 152 (172)
T ss_dssp HSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESS------THHHHHSGTTTSEEEESTT--SHHHHHHHH
T ss_pred ccccccccccccceeccccccccccccccccccccccceeeccc------cCCceeeccccceEEeCCC--CHHHHHHHH
Confidence 65 456888999999975 455699999999999998752 2445666677779999877 457999999
Q ss_pred HHHHhCC
Q 002206 344 ERAISLK 350 (953)
Q Consensus 344 ~~ll~~~ 350 (953)
.++++++
T Consensus 153 ~~~l~~~ 159 (172)
T PF00534_consen 153 EKLLNDP 159 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHCCH
Confidence 9999765
No 175
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.62 E-value=0.00023 Score=80.47 Aligned_cols=117 Identities=12% Similarity=0.057 Sum_probs=68.3
Q ss_pred CCCcEEEEEcCCCCc---h---HhH---HHhhCC-CCcEEEEeCCCCC-----------CCCCCeEECCCCCCH--HHHH
Q 002206 221 DDVKLLILNFGGQPA---G---WKL---KEEYLP-SGWKCLVCGASDS-----------QLPPNFIKLPKDAYT--PDFM 277 (953)
Q Consensus 221 ~~~~vVlvs~Gs~~~---~---~~l---l~~ll~-~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~--pdlL 277 (953)
..++.+++++=.... + ..+ +.++.. .++.+++...+.+ .+ +|+++++...+. -.+|
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll 256 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLL 256 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHH
Confidence 467889998843222 1 122 222322 4666666655432 14 588886543332 2788
Q ss_pred hhcCEEEecCChhHHH-HHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 278 AASDCMLGKIGYGTVS-EALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 278 a~aDlfIthgG~~Tv~-Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
++|+++||-.| ++. ||.++|+|+|.+. ..+|. ......|..+.+. ..++.+..++++++.+
T Consensus 257 ~~a~~vvgdSs--GI~eEa~~lg~P~v~iR--~~geR----qe~r~~~~nvlv~---~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 257 KNADLVVGDSS--GIQEEAPSLGKPVVNIR--DSGER----QEGRERGSNVLVG---TDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHESEEEESSH--HHHHHGGGGT--EEECS--SS-S-----HHHHHTTSEEEET---SSHHHHHHHHHHHHH-
T ss_pred hcceEEEEcCc--cHHHHHHHhCCeEEEec--CCCCC----HHHHhhcceEEeC---CCHHHHHHHHHHHHhC
Confidence 89999999999 566 9999999999995 33333 3455667777754 3467889999999875
No 176
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only]
Probab=97.60 E-value=0.0016 Score=68.58 Aligned_cols=93 Identities=24% Similarity=0.350 Sum_probs=70.9
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEe
Q 002206 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 709 (953)
Q Consensus 630 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~ 709 (953)
.++.+.+.+++|+|+|+|-|+|.+.+.+.|++..++.+ .++.++.|+.+|-. .-+|+.|-.+..+|| +.+.
T Consensus 73 ~~~~v~~~~~~P~G~G~G~Sga~AL~~Ala~a~~~~~~--~~~a~~~AH~aEV~---~gtGLGDVvAq~~GG----lViR 143 (283)
T COG1829 73 DGVGVRIESPVPLGCGYGVSGAGALGTALALAEELGLG--EESAARIAHVAEVE---NGTGLGDVVAQYTGG----LVIR 143 (283)
T ss_pred cCcceEEEecCCCCcccchhHHHHHHHHHHHHhhcCCC--HHHHHHHHHHHHHH---cCCCchHHHHHhcCc----EEEE
Confidence 35779999999999999999999999999999998876 78899999999854 345778999999999 2344
Q ss_pred ecCc--cc--eeeeecCCCeEEEEEeC
Q 002206 710 CQPA--EL--LGVVEIPSHIRFWGIDS 732 (953)
Q Consensus 710 ~~~~--~~--~~~~~~p~~~~~vl~ds 732 (953)
.++. .+ .+.++.|+ ++++.+.-
T Consensus 144 ~~pG~Pg~~~vd~Ip~~~-~~V~~~~~ 169 (283)
T COG1829 144 VKPGGPGEGEVDRIPVPG-LRVITISL 169 (283)
T ss_pred ecCCCCCeEEEEEeecCC-ceEEEEEc
Confidence 4432 11 24455554 77766543
No 177
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.57 E-value=0.00099 Score=76.09 Aligned_cols=120 Identities=13% Similarity=0.004 Sum_probs=83.9
Q ss_pred cEEEEEcCCCCch---HhHHHh---hC--CCCcEEEEeCCCCC-----------CCCCCeEECCCCCCHHHHHhhcCEEE
Q 002206 224 KLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS-----------QLPPNFIKLPKDAYTPDFMAASDCML 284 (953)
Q Consensus 224 ~vVlvs~Gs~~~~---~~ll~~---ll--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~pdlLa~aDlfI 284 (953)
+..+++.|..... ..+++. +. .+++.++++|.... .++.+|.+.++.+.+.++++.||++|
T Consensus 204 ~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v 283 (372)
T cd04949 204 PHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSL 283 (372)
T ss_pred CCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEE
Confidence 3456677776542 123332 21 25677777775431 14678998888778889999999999
Q ss_pred ecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 285 GKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 285 thg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
.-+ ...++.||+++|+|+|+...+.. +...++....|..++..+ .+.+.++|.++++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g-----~~~~v~~~~~G~lv~~~d--~~~la~~i~~ll~~~ 346 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHGLPVISYDVNYG-----PSEIIEDGENGYLVPKGD--IEALAEAIIELLNDP 346 (372)
T ss_pred ecccccccChHHHHHHhCCCCEEEecCCCC-----cHHHcccCCCceEeCCCc--HHHHHHHHHHHHcCH
Confidence 643 23589999999999999874321 234466667888887665 468999999999876
No 178
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=97.48 E-value=6.3e-05 Score=73.19 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=27.6
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
++++..||+.|+++|+++|++|||+|++.+..
T Consensus 4 ~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 4 ATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 45666899999999999999999999988774
No 179
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.36 E-value=0.0067 Score=72.11 Aligned_cols=120 Identities=11% Similarity=-0.006 Sum_probs=80.5
Q ss_pred CcEEEEEcCCCCch---HhHHHhh---C--CCCcEEEEeCCCCC-----------CCCCCeEECCCCCCHHHHHhhcCEE
Q 002206 223 VKLLILNFGGQPAG---WKLKEEY---L--PSGWKCLVCGASDS-----------QLPPNFIKLPKDAYTPDFMAASDCM 283 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~---~~ll~~l---l--~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~~pdlLa~aDlf 283 (953)
++.++++.|..... ..+++++ . .+++.+++.|.... .+.++|...|+. .++++++.+|+|
T Consensus 318 ~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~ 396 (500)
T TIGR02918 318 KPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELY 396 (500)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEE
Confidence 34567788887653 2233332 1 25677777776542 135678888876 578999999999
Q ss_pred EecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCC--CC----hhhHHHHHHHHHh
Q 002206 284 LGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD--LL----TGHWKPYLERAIS 348 (953)
Q Consensus 284 Ithg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~d--l~----~~~l~~al~~ll~ 348 (953)
|.-+ |+ .+++||+++|+|+|+...+.. +.+.++....|..++..+ -. .+.+.++|.++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G-----~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~ 466 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSGLGMIGFDVNYG-----NPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN 466 (500)
T ss_pred EEcCccccccHHHHHHHHhCCCEEEecCCCC-----CHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC
Confidence 9643 33 589999999999999875321 233465556788887321 11 4678888988884
No 180
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.33 E-value=0.054 Score=58.33 Aligned_cols=307 Identities=14% Similarity=0.111 Sum_probs=147.6
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHH-HH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLE-KY 95 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 95 (953)
++.+-+..+ -|+-....+..+|.++||+|.+.|-.... ..+.+..=++.+... |... .. ++. .+
T Consensus 2 kVwiDI~n~--~hvhfFk~lI~elekkG~ev~iT~rd~~~-v~~LLd~ygf~~~~I----gk~g----~~----tl~~Kl 66 (346)
T COG1817 2 KVWIDIGNP--PHVHFFKNLIWELEKKGHEVLITCRDFGV-VTELLDLYGFPYKSI----GKHG----GV----TLKEKL 66 (346)
T ss_pred eEEEEcCCc--chhhHHHHHHHHHHhCCeEEEEEEeecCc-HHHHHHHhCCCeEee----cccC----Cc----cHHHHH
Confidence 343444333 68888999999999999999988764221 111111111222221 1110 01 111 22
Q ss_pred HHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhhc
Q 002206 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDY 175 (953)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (953)
..++ .......+.+.+++||+.+.-+++-+...|.-+|+|.|.+.+..-......+ .+
T Consensus 67 ~~~~-----eR~~~L~ki~~~~kpdv~i~~~s~~l~rvafgLg~psIi~~D~ehA~~qnkl-----------------~~ 124 (346)
T COG1817 67 LESA-----ERVYKLSKIIAEFKPDVAIGKHSPELPRVAFGLGIPSIIFVDNEHAEAQNKL-----------------TL 124 (346)
T ss_pred HHHH-----HHHHHHHHHHhhcCCceEeecCCcchhhHHhhcCCceEEecCChhHHHHhhc-----------------ch
Confidence 2221 1122334567889999999977888888899999999988553311110000 00
Q ss_pred cccceEEecC--------CCCCCCCCCceeecCcccc-----cCCCChHHHHHHhCCCCCCcEEEEEcCCCCch------
Q 002206 176 SHCEFLIRLP--------GYCPMPAFRDVIDVPLVVR-----RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG------ 236 (953)
Q Consensus 176 ~~~~~l~~~~--------~~~~~p~~~~v~~vg~~~~-----~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~------ 236 (953)
+-++.++... .....| .++.++.++.. ...+++ ++.+.||+..+.+.|++=+=+.++.
T Consensus 125 Pla~~ii~P~~~~~~~~~~~G~~p--~~i~~~~giae~~~v~~f~pd~-evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~ 201 (346)
T COG1817 125 PLADVIITPEAIDEEELLDFGADP--NKISGYNGIAELANVYGFVPDP-EVLKELGLEEGETYIVMRPEPWGAHYDNGDR 201 (346)
T ss_pred hhhhheecccccchHHHHHhCCCc--cceecccceeEEeecccCCCCH-HHHHHcCCCCCCceEEEeeccccceeecccc
Confidence 1111111000 000000 01122222111 122333 6778899976677777755544431
Q ss_pred -HhHHHhhCC--CCcEEEEeCCCCCC--CC---CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCC
Q 002206 237 -WKLKEEYLP--SGWKCLVCGASDSQ--LP---PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRD 308 (953)
Q Consensus 237 -~~ll~~ll~--~~~~~vv~G~~~~~--lp---~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~ 308 (953)
...+..+++ ++.-.+++-+...+ +- .|+.+-....+.-++|-.|+++||.|| +--.||+..|+|.|..- +
T Consensus 202 ~~~~~~~li~~l~k~giV~ipr~~~~~eife~~~n~i~pk~~vD~l~Llyya~lvig~gg-TMarEaAlLGtpaIs~~-p 279 (346)
T COG1817 202 GISVLPDLIKELKKYGIVLIPREKEQAEIFEGYRNIIIPKKAVDTLSLLYYATLVIGAGG-TMAREAALLGTPAISCY-P 279 (346)
T ss_pred chhhHHHHHHHHHhCcEEEecCchhHHHHHhhhccccCCcccccHHHHHhhhheeecCCc-hHHHHHHHhCCceEEec-C
Confidence 122332221 12223333222221 11 222211111121258888999999555 66789999999999974 2
Q ss_pred CCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc----CCCCHHHHHHHHHHHHH
Q 002206 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE----GGINGGEVAAHILQETA 371 (953)
Q Consensus 309 ~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~----~~~~g~~~~A~~i~~~l 371 (953)
+ .--.--+++.+.|.- +...+.. +.|..++ +++.++.-.+ ...+-.+...+.+.+++
T Consensus 280 G--kll~vdk~lie~G~~--~~s~~~~-~~~~~a~-~~l~~~~~kK~~~~k~e~~~~~ii~~ve~~~ 340 (346)
T COG1817 280 G--KLLAVDKYLIEKGLL--YHSTDEI-AIVEYAV-RNLKYRRLKKTGVLKLEDPTRLIIDVVEEML 340 (346)
T ss_pred C--ccccccHHHHhcCce--eecCCHH-HHHHHHH-HHhhchhhccccccccccHHHHHHHHHHHHh
Confidence 2 111223566777554 4433432 4454444 4443432111 23344444445555443
No 181
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.26 E-value=0.066 Score=59.90 Aligned_cols=100 Identities=18% Similarity=0.117 Sum_probs=72.1
Q ss_pred CCeEECCCCCCHH--HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhH
Q 002206 262 PNFIKLPKDAYTP--DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHW 339 (953)
Q Consensus 262 ~NV~v~~~~~~~p--dlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l 339 (953)
+||++++-..+.+ -+|.+|-+++|-+| +-.-||-.+|+|++.+. ...|++. ....|.-+.+..+ .+.+
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~iltDSG-giqEEAp~lg~Pvl~lR--~~TERPE----~v~agt~~lvg~~---~~~i 331 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFLILTDSG-GIQEEAPSLGKPVLVLR--DTTERPE----GVEAGTNILVGTD---EENI 331 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceEEEecCC-chhhhHHhcCCcEEeec--cCCCCcc----ceecCceEEeCcc---HHHH
Confidence 4677765444444 78889999999999 78889999999999998 5667754 3445666666543 4678
Q ss_pred HHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 002206 340 KPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (953)
Q Consensus 340 ~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l 371 (953)
.+++.++++++..|. .......+++++|..+.
T Consensus 332 ~~~~~~ll~~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 332 LDAATELLEDEEFYERMSNAKNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred HHHHHHHhhChHHHHHHhcccCCCcCcchHHHHHHHHHHHh
Confidence 889999998765442 23445667777777664
No 182
>PLN02949 transferase, transferring glycosyl groups
Probab=97.23 E-value=0.035 Score=65.46 Aligned_cols=95 Identities=9% Similarity=-0.035 Sum_probs=63.6
Q ss_pred CCcEEEEeCCCC--C---------------CCCCCeEECCCCC--CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcE
Q 002206 246 SGWKCLVCGASD--S---------------QLPPNFIKLPKDA--YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPF 302 (953)
Q Consensus 246 ~~~~~vv~G~~~--~---------------~lp~NV~v~~~~~--~~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~ 302 (953)
++++++++|... . .+.++|.++++.+ .++++|+.||++|.-. |+ .++.|||++|+|+
T Consensus 302 ~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PV 381 (463)
T PLN02949 302 PRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVP 381 (463)
T ss_pred CCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcE
Confidence 467888887531 0 1467899888764 4568999999999421 33 4899999999999
Q ss_pred EEEeCCCCC-chHHHHHHHHH--cC-cEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 303 VFVRRDYFN-EEPFLRNMLEF--YQ-GGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 303 l~iP~~~~~-DQ~~NA~~l~~--~G-~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
|+...++.. |. +.. .| .|...+ +++.|.++|.++++++
T Consensus 382 Ia~~~gGp~~eI------V~~~~~g~tG~l~~----~~~~la~ai~~ll~~~ 423 (463)
T PLN02949 382 IAHNSAGPKMDI------VLDEDGQQTGFLAT----TVEEYADAILEVLRMR 423 (463)
T ss_pred EEeCCCCCccee------eecCCCCcccccCC----CHHHHHHHHHHHHhCC
Confidence 998854322 11 111 12 244432 4678999999998753
No 183
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=96.88 E-value=0.0085 Score=56.28 Aligned_cols=108 Identities=16% Similarity=0.110 Sum_probs=75.7
Q ss_pred EEEEcCCCCch-HhHHH-----hhC--CCCcEEEEeCCCCCCCC-CCeEECCCCCC--HHHHHhhcCEEEecCChhHHHH
Q 002206 226 LILNFGGQPAG-WKLKE-----EYL--PSGWKCLVCGASDSQLP-PNFIKLPKDAY--TPDFMAASDCMLGKIGYGTVSE 294 (953)
Q Consensus 226 Vlvs~Gs~~~~-~~ll~-----~ll--~~~~~~vv~G~~~~~lp-~NV~v~~~~~~--~pdlLa~aDlfIthgG~~Tv~E 294 (953)
++|+.||.-.+ ..+.. .+. ..+..++-.|.... .| ...++++|... +..+...+.++|+|+|-||+..
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~-kpvagl~v~~F~~~~kiQsli~darIVISHaG~GSIL~ 80 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDI-KPVAGLRVYGFDKEEKIQSLIHDARIVISHAGEGSILL 80 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCc-ccccccEEEeechHHHHHHHhhcceEEEeccCcchHHH
Confidence 68899987443 11111 111 12234555677543 34 34677777532 4477778999999999999999
Q ss_pred HHHcCCcEEEEeCCC------CCchHHHHHHHHHcCcEEEEecCCC
Q 002206 295 ALAYKLPFVFVRRDY------FNEEPFLRNMLEFYQGGVEMIRRDL 334 (953)
Q Consensus 295 al~~GvP~l~iP~~~------~~DQ~~NA~~l~~~G~g~~l~~~dl 334 (953)
++..++|.|++|+.- ...|...|..+.+.++-+.+++.+.
T Consensus 81 ~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~ 126 (161)
T COG5017 81 LLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTEL 126 (161)
T ss_pred HhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCch
Confidence 999999999999753 1346778999999999999987654
No 184
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.43 E-value=0.0064 Score=58.42 Aligned_cols=94 Identities=20% Similarity=0.164 Sum_probs=59.9
Q ss_pred CCcEEEEeCCCCCC---C-CCCeEECCCCCCHHHHHhhcCEEEecC----C-hhHHHHHHHcCCcEEEEeCCCCCchHHH
Q 002206 246 SGWKCLVCGASDSQ---L-PPNFIKLPKDAYTPDFMAASDCMLGKI----G-YGTVSEALAYKLPFVFVRRDYFNEEPFL 316 (953)
Q Consensus 246 ~~~~~vv~G~~~~~---l-p~NV~v~~~~~~~pdlLa~aDlfIthg----G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~N 316 (953)
+++.+.+.|...+. + .+||+++++++.++++|+.||++|.-. | .+++.|++++|+|+|+.+. . .
T Consensus 33 p~~~l~i~G~~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~------~ 105 (135)
T PF13692_consen 33 PDIELIIIGNGPDELKRLRRPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-G------A 105 (135)
T ss_dssp TTEEEEEECESS-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-H------C
T ss_pred cCEEEEEEeCCHHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-c------h
Confidence 56777788875432 2 569999888765678899999999632 3 3789999999999999873 1 1
Q ss_pred HHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 317 RNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 317 A~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
....+..+.+..+ .. ++++|.++|.++++|
T Consensus 106 ~~~~~~~~~~~~~-~~--~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 106 EGIVEEDGCGVLV-AN--DPEELAEAIERLLND 135 (135)
T ss_dssp HCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred hhheeecCCeEEE-CC--CHHHHHHHHHHHhcC
Confidence 2344557778777 33 468999999999864
No 185
>PHA01633 putative glycosyl transferase group 1
Probab=96.37 E-value=0.014 Score=65.46 Aligned_cols=138 Identities=12% Similarity=0.036 Sum_probs=83.0
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHh---hC--CCC----cEEEEeCCCC---CCCCCCeEECCCC-----
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSG----WKCLVCGASD---SQLPPNFIKLPKD----- 270 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~---ll--~~~----~~~vv~G~~~---~~lp~NV~v~~~~----- 270 (953)
.++++.++.......++++.|..... . .++++ +. .++ +.+++.|... ..++++|++.++.
T Consensus 135 ~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~~~~~l~l~~~V~f~g~~G~~~~ 214 (335)
T PHA01633 135 PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHKQFTQLEVPANVHFVAEFGHNSR 214 (335)
T ss_pred HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHHHHHHcCCCCcEEEEecCCCCCH
Confidence 35666665432234566667776552 2 23332 21 122 3555666432 1267889887432
Q ss_pred CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCch----------HHHHHHHH--HcCcEEEEecCCC
Q 002206 271 AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEE----------PFLRNMLE--FYQGGVEMIRRDL 334 (953)
Q Consensus 271 ~~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ----------~~NA~~l~--~~G~g~~l~~~dl 334 (953)
++++++++++|+||.-+ | ..++.||+++|+|+|+...+...|- ..++..+. ..|.|..++. .
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~--~ 292 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHK--F 292 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecC--C
Confidence 34668999999999643 3 2589999999999999865443331 12233333 3567766653 4
Q ss_pred ChhhHHHHHHHHHhCC
Q 002206 335 LTGHWKPYLERAISLK 350 (953)
Q Consensus 335 ~~~~l~~al~~ll~~~ 350 (953)
+++++.++|.+++...
T Consensus 293 d~~~la~ai~~~~~~~ 308 (335)
T PHA01633 293 QIEDMANAIILAFELQ 308 (335)
T ss_pred CHHHHHHHHHHHHhcc
Confidence 5689999999887543
No 186
>PRK14098 glycogen synthase; Provisional
Probab=96.09 E-value=0.04 Score=65.57 Aligned_cols=134 Identities=16% Similarity=0.039 Sum_probs=86.1
Q ss_pred HHHHHHhCCCCC-CcEEEEEcCCCCch--Hh-HHH---hhCCCCcEEEEeCCCCC-----------CCCCCeEECCCCCC
Q 002206 211 KEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDS-----------QLPPNFIKLPKDAY 272 (953)
Q Consensus 211 ~e~~~~l~~~~~-~~vVlvs~Gs~~~~--~~-ll~---~ll~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~~ 272 (953)
..+++.++++.+ +..++++.|..... .. +++ .+...++.+++.|.... .++.+|.+.++.+.
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~ 372 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTD 372 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCH
Confidence 456777887632 33567777876652 23 222 23345678888886541 14778888765432
Q ss_pred --HHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 273 --TPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 273 --~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
++.+++.+|+|+..+ |. .+.+||+++|+|.|+....+..|... +..+..+.|..++..+ ++.+.++|.++
T Consensus 373 ~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~--~~~~~~~~G~l~~~~d--~~~la~ai~~~ 448 (489)
T PRK14098 373 AFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIE--EVSEDKGSGFIFHDYT--PEALVAKLGEA 448 (489)
T ss_pred HHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeee--cCCCCCCceeEeCCCC--HHHHHHHHHHH
Confidence 358899999999643 21 48899999999999877555444311 0111246788887655 57888888887
Q ss_pred Hh
Q 002206 347 IS 348 (953)
Q Consensus 347 l~ 348 (953)
++
T Consensus 449 l~ 450 (489)
T PRK14098 449 LA 450 (489)
T ss_pred HH
Confidence 63
No 187
>PLN02939 transferase, transferring glycosyl groups
Probab=95.99 E-value=0.072 Score=66.39 Aligned_cols=136 Identities=20% Similarity=0.193 Sum_probs=87.0
Q ss_pred hHHHHHHhCCCCC--CcEEEEEcCCCCch--HhH-HHh---hCCCCcEEEEeCCCCC-----C---------CCCCeEEC
Q 002206 210 RKEVRKELGIEDD--VKLLILNFGGQPAG--WKL-KEE---YLPSGWKCLVCGASDS-----Q---------LPPNFIKL 267 (953)
Q Consensus 210 ~~e~~~~l~~~~~--~~vVlvs~Gs~~~~--~~l-l~~---ll~~~~~~vv~G~~~~-----~---------lp~NV~v~ 267 (953)
+..+++.+|++.+ ...++.+.|..... ..+ +.+ +...+..+++.|.+.. . ++++|.++
T Consensus 763 K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~Fl 842 (977)
T PLN02939 763 KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLI 842 (977)
T ss_pred hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEE
Confidence 4568888998742 33567777877652 332 222 3345678888876531 0 24678877
Q ss_pred CCCCCH--HHHHhhcCEEEecC-----ChhHHHHHHHcCCcEEEEeCCCCCchHHH--HHHH-HHcCcEEEEecCCCChh
Q 002206 268 PKDAYT--PDFMAASDCMLGKI-----GYGTVSEALAYKLPFVFVRRDYFNEEPFL--RNML-EFYQGGVEMIRRDLLTG 337 (953)
Q Consensus 268 ~~~~~~--pdlLa~aDlfIthg-----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~N--A~~l-~~~G~g~~l~~~dl~~~ 337 (953)
++.+.. +.+++.+|+||... | .+.+|||++|+|.|+...++..|...+ -..+ +..+.|..+...+ ++
T Consensus 843 G~~de~lah~IYAaADIFLmPSr~EPfG-LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D--~e 919 (977)
T PLN02939 843 LKYDEALSHSIYAASDMFIIPSMFEPCG-LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPD--EQ 919 (977)
T ss_pred eccCHHHHHHHHHhCCEEEECCCccCCc-HHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCC--HH
Confidence 665543 37899999999642 4 689999999999999876555543111 0011 1235687777654 56
Q ss_pred hHHHHHHHHHh
Q 002206 338 HWKPYLERAIS 348 (953)
Q Consensus 338 ~l~~al~~ll~ 348 (953)
.+..+|.+++.
T Consensus 920 aLa~AL~rAL~ 930 (977)
T PLN02939 920 GLNSALERAFN 930 (977)
T ss_pred HHHHHHHHHHH
Confidence 78888888764
No 188
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=95.87 E-value=0.04 Score=63.99 Aligned_cols=122 Identities=11% Similarity=0.033 Sum_probs=77.5
Q ss_pred CCcEEEEEcCCCCch--H-hHHHh---hC--CC--CcEEEEeCCCCC---------C--CCCCeEECCCCCC--HHHHHh
Q 002206 222 DVKLLILNFGGQPAG--W-KLKEE---YL--PS--GWKCLVCGASDS---------Q--LPPNFIKLPKDAY--TPDFMA 278 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~~---ll--~~--~~~~vv~G~~~~---------~--lp~NV~v~~~~~~--~pdlLa 278 (953)
+.+..+++.|..... . .++++ +. .+ +..+++.|.... . ...+|.+.|+++. ++.+++
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~ 307 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYK 307 (407)
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHh
Confidence 345667778877652 2 23332 21 12 234455665431 1 2356888888753 457775
Q ss_pred h--cCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 279 A--SDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 279 ~--aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
. +|+||... | .++++|||++|+|+|+...++. .+.+...+.|..+...+ +++.+.++|.++++++
T Consensus 308 ~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~------~e~i~~~~~G~l~~~~~-~~~~la~~I~~ll~~~ 378 (407)
T cd04946 308 ENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGT------PEIVDNGGNGLLLSKDP-TPNELVSSLSKFIDNE 378 (407)
T ss_pred hcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCc------HHHhcCCCcEEEeCCCC-CHHHHHHHHHHHHhCH
Confidence 4 88898543 2 3589999999999999775443 33455555788876532 3578999999999766
No 189
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=95.53 E-value=5.7 Score=45.31 Aligned_cols=81 Identities=12% Similarity=0.024 Sum_probs=59.4
Q ss_pred CeEECCCCCCHHHHHhhcCEEEe------cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCCh
Q 002206 263 NFIKLPKDAYTPDFMAASDCMLG------KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (953)
Q Consensus 263 NV~v~~~~~~~pdlLa~aDlfIt------hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~ 336 (953)
+|.+.+-...|-.++..+|+.+- +||. -..|.+++|+|+|.=| ..+-|...++++.+.|+++.++. +
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGH-N~LEpa~~~~pvi~Gp--~~~Nf~ei~~~l~~~ga~~~v~~----~ 373 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGH-NPLEPAAFGTPVIFGP--YTFNFSDIAERLLQAGAGLQVED----A 373 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCC-ChhhHHHcCCCEEeCC--ccccHHHHHHHHHhcCCeEEECC----H
Confidence 56654443345567777887552 4554 4789999999999988 55667889999999999999985 3
Q ss_pred hhHHHHHHHHHhCC
Q 002206 337 GHWKPYLERAISLK 350 (953)
Q Consensus 337 ~~l~~al~~ll~~~ 350 (953)
+.|..+++.+++++
T Consensus 374 ~~l~~~v~~l~~~~ 387 (419)
T COG1519 374 DLLAKAVELLLADE 387 (419)
T ss_pred HHHHHHHHHhcCCH
Confidence 45677777766554
No 190
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.43 E-value=2.2 Score=47.46 Aligned_cols=96 Identities=17% Similarity=0.052 Sum_probs=60.4
Q ss_pred CCeEECCCC--CCHHHHHhhcCEEEecCCh-hHHHHHHHcCCcEEEEeCCCCCchH-HHHHHHHHcCcEEEEecCCCChh
Q 002206 262 PNFIKLPKD--AYTPDFMAASDCMLGKIGY-GTVSEALAYKLPFVFVRRDYFNEEP-FLRNMLEFYQGGVEMIRRDLLTG 337 (953)
Q Consensus 262 ~NV~v~~~~--~~~pdlLa~aDlfIthgG~-~Tv~Eal~~GvP~l~iP~~~~~DQ~-~NA~~l~~~G~g~~l~~~dl~~~ 337 (953)
+.+.+.+.. .|..++|+.||.||.-+.- +-++||++.|+|+.+++.+.....+ .-.+.|++.|+...++...-
T Consensus 209 ~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~~~~~--- 285 (311)
T PF06258_consen 209 PGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFTGWRD--- 285 (311)
T ss_pred CceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECCCccc---
Confidence 455444332 3566999999999987764 4578999999999999976422211 23466777777766553211
Q ss_pred hHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHH
Q 002206 338 HWKPYLERAISLKPCYEGGINGGEVAAHILQET 370 (953)
Q Consensus 338 ~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~ 370 (953)
+. . +..| ...+-+.++|++|.+.
T Consensus 286 -~~----~----~~~~-~pl~et~r~A~~i~~r 308 (311)
T PF06258_consen 286 -LE----Q----WTPY-EPLDETDRVAAEIRER 308 (311)
T ss_pred -cc----c----cccC-CCccHHHHHHHHHHHH
Confidence 11 1 1111 2567788888887764
No 191
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=93.17 E-value=0.74 Score=46.47 Aligned_cols=39 Identities=21% Similarity=0.378 Sum_probs=29.7
Q ss_pred HHHHHHcCCCcEEEECC---CchHHHHHHHh------CCcEEEEecCC
Q 002206 110 EVEWLNSIKADLVVSDV---VPVACRAAADA------GIRSVCVTNFS 148 (953)
Q Consensus 110 ~~~~L~~~kpDlVV~D~---~~~~~~~A~~~------giP~I~is~~~ 148 (953)
.+..+.+.+||+||+.- ....+.+|..+ +.++|.+.++.
T Consensus 84 ~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~a 131 (170)
T PF08660_consen 84 SLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFA 131 (170)
T ss_pred HHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeee
Confidence 35667888999999885 33456677888 99999997654
No 192
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=92.92 E-value=7.4 Score=43.74 Aligned_cols=93 Identities=16% Similarity=0.372 Sum_probs=56.3
Q ss_pred HHHHhCCCCCCcEEEEEcCCC-Cc--hH------hHHHhhCCCCcEEEEeCCCCCC---------CCCCeE-ECCCCC--
Q 002206 213 VRKELGIEDDVKLLILNFGGQ-PA--GW------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFI-KLPKDA-- 271 (953)
Q Consensus 213 ~~~~l~~~~~~~vVlvs~Gs~-~~--~~------~ll~~ll~~~~~~vv~G~~~~~---------lp~NV~-v~~~~~-- 271 (953)
+...++++++++.|.+..|+. +. .| ++.+.+...+..++++|...+. .+.++. ..+...
T Consensus 164 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~ 243 (334)
T TIGR02195 164 ALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLD 243 (334)
T ss_pred HHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHH
Confidence 345556655678888888874 23 12 2223343345667777654321 233332 223221
Q ss_pred CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002206 272 YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (953)
Q Consensus 272 ~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP 306 (953)
.+..+|+.||+|||.=. |-+.=|.+.|+|+|.+=
T Consensus 244 el~ali~~a~l~I~~DS-Gp~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 244 EAVDLIALAKAVVTNDS-GLMHVAAALNRPLVALY 277 (334)
T ss_pred HHHHHHHhCCEEEeeCC-HHHHHHHHcCCCEEEEE
Confidence 23478889999999433 67888999999999974
No 193
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=92.65 E-value=2.5 Score=46.81 Aligned_cols=68 Identities=19% Similarity=0.194 Sum_probs=50.1
Q ss_pred CCcEEEEeCCCCCC-----------CCCCeEECCCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCC
Q 002206 246 SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRD 308 (953)
Q Consensus 246 ~~~~~vv~G~~~~~-----------lp~NV~v~~~~~--~~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~ 308 (953)
++.++++.|.++.. +.+.|.+++-++ .+-+.|..-|+|+... =-.++.||+.||+|+|....+
T Consensus 225 p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVG 304 (426)
T KOG1111|consen 225 PEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVG 304 (426)
T ss_pred CCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecC
Confidence 56788888877631 567888877653 3448999999999533 124788999999999998866
Q ss_pred CCCch
Q 002206 309 YFNEE 313 (953)
Q Consensus 309 ~~~DQ 313 (953)
+-.|-
T Consensus 305 GIpeV 309 (426)
T KOG1111|consen 305 GIPEV 309 (426)
T ss_pred Ccccc
Confidence 55544
No 194
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=92.56 E-value=1.4 Score=42.35 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=54.0
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHH
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (953)
|++....+ ..| ...+++.|.++||+|++++...... .......+.+... ..+ ... .+ .+.
T Consensus 2 Il~i~~~~-~~~---~~~~~~~L~~~g~~V~ii~~~~~~~--~~~~~~~i~~~~~--~~~--------~k~--~~-~~~- 61 (139)
T PF13477_consen 2 ILLIGNTP-STF---IYNLAKELKKRGYDVHIITPRNDYE--KYEIIEGIKVIRL--PSP--------RKS--PL-NYI- 61 (139)
T ss_pred EEEEecCc-HHH---HHHHHHHHHHCCCEEEEEEcCCCch--hhhHhCCeEEEEe--cCC--------CCc--cH-HHH-
Confidence 55554433 233 5688999999999999998854321 1110122222221 000 000 00 010
Q ss_pred HhhccHHHHHHHHHHHHHcCCCcEEEECC-Cc---hHHHHHHHhC-CcEEEE
Q 002206 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV-VP---VACRAAADAG-IRSVCV 144 (953)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~---~~~~~A~~~g-iP~I~i 144 (953)
.. ....+.+++.+||+|++.. .+ .+.+++...+ +|+|..
T Consensus 62 -------~~-~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 62 -------KY-FRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred -------HH-HHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 11 1336678899999999876 32 2344566778 888854
No 195
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=92.48 E-value=4.4 Score=45.17 Aligned_cols=32 Identities=9% Similarity=0.201 Sum_probs=27.7
Q ss_pred cCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCC
Q 002206 23 TGHGFGHATRVVEVVRNLISA--GHDVHVVTGAP 54 (953)
Q Consensus 23 ~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~ 54 (953)
...+.|-+..+.++.++|+++ +.+|++++...
T Consensus 6 r~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~ 39 (319)
T TIGR02193 6 KTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEG 39 (319)
T ss_pred ecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChh
Confidence 445899999999999999998 88999997753
No 196
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=92.46 E-value=7.9 Score=43.85 Aligned_cols=91 Identities=14% Similarity=0.272 Sum_probs=53.6
Q ss_pred HHHhCCCCCCcEEEEEcCCC-Cc--hH------hHHHhhCCCCcEEEEeCCCCCC---------CCC----CeE-ECCCC
Q 002206 214 RKELGIEDDVKLLILNFGGQ-PA--GW------KLKEEYLPSGWKCLVCGASDSQ---------LPP----NFI-KLPKD 270 (953)
Q Consensus 214 ~~~l~~~~~~~vVlvs~Gs~-~~--~~------~ll~~ll~~~~~~vv~G~~~~~---------lp~----NV~-v~~~~ 270 (953)
...+++.++++.|.+..|+. +. .| ++.+.+...++.++++|...+. ++. ++. +.+..
T Consensus 171 ~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~ 250 (348)
T PRK10916 171 CAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGET 250 (348)
T ss_pred HHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCC
Confidence 33444444667888888874 22 22 2222343446667777653311 221 222 22332
Q ss_pred CCHH---HHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002206 271 AYTP---DFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (953)
Q Consensus 271 ~~~p---dlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP 306 (953)
.+. .+|+.||+|||. --|-+.=|.+.|+|+|.+=
T Consensus 251 -sL~el~ali~~a~l~I~n-DTGp~HlAaA~g~P~valf 287 (348)
T PRK10916 251 -QLEQAVILIAACKAIVTN-DSGLMHVAAALNRPLVALY 287 (348)
T ss_pred -CHHHHHHHHHhCCEEEec-CChHHHHHHHhCCCEEEEE
Confidence 233 677899999984 3368889999999999974
No 197
>PHA01630 putative group 1 glycosyl transferase
Probab=92.13 E-value=0.42 Score=53.85 Aligned_cols=42 Identities=24% Similarity=0.144 Sum_probs=32.5
Q ss_pred CHHHHHhhcCEEEec---CC-hhHHHHHHHcCCcEEEEeCCCCCch
Q 002206 272 YTPDFMAASDCMLGK---IG-YGTVSEALAYKLPFVFVRRDYFNEE 313 (953)
Q Consensus 272 ~~pdlLa~aDlfIth---gG-~~Tv~Eal~~GvP~l~iP~~~~~DQ 313 (953)
.++++++.+|+||.- -| ..++.|||++|+|+|+...++..|.
T Consensus 202 ~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~ 247 (331)
T PHA01630 202 DIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEW 247 (331)
T ss_pred HHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhh
Confidence 456899999999952 22 3589999999999999986554454
No 198
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=91.36 E-value=0.59 Score=45.36 Aligned_cols=27 Identities=44% Similarity=0.629 Sum_probs=20.5
Q ss_pred chHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 28 GHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 28 GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
|--.....++++|.++||+|++++..+
T Consensus 2 G~~~~~~~l~~~L~~~G~~V~v~~~~~ 28 (160)
T PF13579_consen 2 GIERYVRELARALAARGHEVTVVTPQP 28 (160)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEE--
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 445667899999999999999998754
No 199
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=91.31 E-value=1 Score=50.82 Aligned_cols=109 Identities=14% Similarity=0.063 Sum_probs=69.0
Q ss_pred EEEEcCCCCchHhHHHhhCCCCcEEEEeCCCCC--CCCCCeEECCCCC--CHHHHHhhcCEEEec--------CCh----
Q 002206 226 LILNFGGQPAGWKLKEEYLPSGWKCLVCGASDS--QLPPNFIKLPKDA--YTPDFMAASDCMLGK--------IGY---- 289 (953)
Q Consensus 226 Vlvs~Gs~~~~~~ll~~ll~~~~~~vv~G~~~~--~lp~NV~v~~~~~--~~pdlLa~aDlfIth--------gG~---- 289 (953)
+++..|+.+.. ..+.. ..+++.++++|.... ...+||.+.|+.+ .++.+|+..-.+|.- +.+
T Consensus 171 ~i~yaG~l~k~-~~l~~-~~~~~~l~i~G~g~~~~~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~ 248 (333)
T PRK09814 171 KINFAGNLEKS-PFLKN-WSQGIKLTVFGPNPEDLENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYN 248 (333)
T ss_pred eEEEecChhhc-hHHHh-cCCCCeEEEECCCccccccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhcc
Confidence 55666777642 22222 234577888887653 3567999988764 244666652222221 111
Q ss_pred --hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 290 --GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 290 --~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
+-+.|.|++|+|+|+.+. ...++.+++.+.|+.++ + .+++.++|..+
T Consensus 249 ~P~K~~~ymA~G~PVI~~~~------~~~~~~V~~~~~G~~v~--~--~~el~~~l~~~ 297 (333)
T PRK09814 249 NPHKLSLYLAAGLPVIVWSK------AAIADFIVENGLGFVVD--S--LEELPEIIDNI 297 (333)
T ss_pred chHHHHHHHHCCCCEEECCC------ccHHHHHHhCCceEEeC--C--HHHHHHHHHhc
Confidence 237889999999999652 34678899999999987 2 34667777664
No 200
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=90.45 E-value=9.9 Score=40.42 Aligned_cols=146 Identities=19% Similarity=0.233 Sum_probs=79.6
Q ss_pred HHHHHcCCCcEEE-ECCCch------HHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhhccccceEEe
Q 002206 111 VEWLNSIKADLVV-SDVVPV------ACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIR 183 (953)
Q Consensus 111 ~~~L~~~kpDlVV-~D~~~~------~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 183 (953)
.++|++.+.|+|| ..|+++ ++.+|+..|||++.+..-.|... .+
T Consensus 59 ~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eRP~~~~~-------------------------gd---- 109 (257)
T COG2099 59 AAFLREEGIDLLIDATHPYAARISQNAARAAKETGIPYLRLERPPWAPN-------------------------GD---- 109 (257)
T ss_pred HHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEECCccccC-------------------------CC----
Confidence 5678899999999 455554 35577888999998865444210 01
Q ss_pred cCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCchHhHHHhhCCC-CcEEEEeCCCCC----
Q 002206 184 LPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPS-GWKCLVCGASDS---- 258 (953)
Q Consensus 184 ~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~~~ll~~ll~~-~~~~vv~G~~~~---- 258 (953)
+.+.|+ +-+++-+.... ..+.||++.|+..- ..+...... .|.+.+.-....
T Consensus 110 -----------~~~~V~--------d~~ea~~~~~~--~~~rVflt~G~~~l--~~f~~~~~~~~~~~Rvlp~~~~~~~~ 166 (257)
T COG2099 110 -----------NWIEVA--------DIEEAAEAAKQ--LGRRVFLTTGRQNL--AHFVAADAHSHVLARVLPPPDVLAKC 166 (257)
T ss_pred -----------ceEEec--------CHHHHHHHHhc--cCCcEEEecCccch--HHHhcCcccceEEEEEcCchHHHHHH
Confidence 111111 01122222221 12468888887654 112222222 223333322111
Q ss_pred ---CCC-CCeEEC--CCCCCHH-HHHh--hcCEEEecC--Chh----HHHHHHHcCCcEEEEeCC
Q 002206 259 ---QLP-PNFIKL--PKDAYTP-DFMA--ASDCMLGKI--GYG----TVSEALAYKLPFVFVRRD 308 (953)
Q Consensus 259 ---~lp-~NV~v~--~~~~~~p-dlLa--~aDlfIthg--G~~----Tv~Eal~~GvP~l~iP~~ 308 (953)
.+| .++.-. ||...+- .+|. .+|++||+- |.| -+.-|...|+|+|+|-++
T Consensus 167 ~~~~~p~~~Iia~~GPfs~~~n~all~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 167 EDLGVPPARIIAMRGPFSEEDNKALLEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred HhcCCChhhEEEecCCcChHHHHHHHHHhCCCEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 123 444433 5554444 5665 499999973 332 255688999999999877
No 201
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.72 E-value=16 Score=39.77 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=27.5
Q ss_pred HHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002206 273 TPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (953)
Q Consensus 273 ~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP 306 (953)
+..+++++|+||+.=. +++.=|.+.|+|+|++=
T Consensus 192 ~~~li~~~~l~I~~Ds-g~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 192 LAALLARADLVVTNDS-GPMHLAAALGTPTVALF 224 (279)
T ss_pred HHHHHHhCCEEEeeCC-HHHHHHHHcCCCEEEEE
Confidence 4588899999999644 57777889999999985
No 202
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=89.20 E-value=1.7 Score=51.01 Aligned_cols=95 Identities=22% Similarity=0.254 Sum_probs=60.9
Q ss_pred HHHhCCCCCCcEEEEEcCCCCch-HhHHH---hh---CCCCcEEEEeCCCCCC-------------C-CCCeEECCCCCC
Q 002206 214 RKELGIEDDVKLLILNFGGQPAG-WKLKE---EY---LPSGWKCLVCGASDSQ-------------L-PPNFIKLPKDAY 272 (953)
Q Consensus 214 ~~~l~~~~~~~vVlvs~Gs~~~~-~~ll~---~l---l~~~~~~vv~G~~~~~-------------l-p~NV~v~~~~~~ 272 (953)
|..+|++ +..+||+++++..+- .+++. +. .|..+.++..|..+++ + ++.+++.+..+.
T Consensus 421 R~~lglp-~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~ 499 (620)
T COG3914 421 RAQLGLP-EDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPN 499 (620)
T ss_pred hhhcCCC-CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCC
Confidence 4567886 677999999876652 23333 22 2333333333432211 2 467777776553
Q ss_pred HHHHHh---hcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCchH
Q 002206 273 TPDFMA---ASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEP 314 (953)
Q Consensus 273 ~pdlLa---~aDlfIth---gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~ 314 (953)
++.++ -+|+|.-. +|.+|+.|++.+|||+|..+ ++|+
T Consensus 500 -~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~----G~~F 542 (620)
T COG3914 500 -EDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV----GEQF 542 (620)
T ss_pred -HHHHHhhchhheeeecccCCCccchHHHHHhcCceeeec----cHHH
Confidence 34444 49999964 78899999999999999986 4774
No 203
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=88.92 E-value=0.93 Score=52.84 Aligned_cols=111 Identities=16% Similarity=0.158 Sum_probs=54.8
Q ss_pred HHHhCCCCCCcEEEEEcCCCCc--h--HhHHHhh---CCCCcEEEEeCCCCC-----------CC-CCCeEECCCCCCHH
Q 002206 214 RKELGIEDDVKLLILNFGGQPA--G--WKLKEEY---LPSGWKCLVCGASDS-----------QL-PPNFIKLPKDAYTP 274 (953)
Q Consensus 214 ~~~l~~~~~~~vVlvs~Gs~~~--~--~~ll~~l---l~~~~~~vv~G~~~~-----------~l-p~NV~v~~~~~~~p 274 (953)
|..+|++ +..++|.+|....+ + ..+..++ .|....++...+... .+ ++.+.+.+..+ ..
T Consensus 276 R~~~gLp-~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~-~~ 353 (468)
T PF13844_consen 276 RAQYGLP-EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAP-RE 353 (468)
T ss_dssp TGGGT---SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE----HH
T ss_pred HHHcCCC-CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCC-HH
Confidence 6778987 55688999876544 1 1111222 233233333332221 12 46677655432 23
Q ss_pred HHH---hhcCEEEe---cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEE
Q 002206 275 DFM---AASDCMLG---KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGV 327 (953)
Q Consensus 275 dlL---a~aDlfIt---hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~ 327 (953)
+.| ..+|+++- ..|.+|++||+++|||+|.+|-..+. ...-+..|...|..-
T Consensus 354 ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~-sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 354 EHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMA-SRVGASILRALGLPE 411 (468)
T ss_dssp HHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGG-GSHHHHHHHHHT-GG
T ss_pred HHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCch-hHHHHHHHHHcCCch
Confidence 555 45999995 35779999999999999999943332 235667778877763
No 204
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=88.91 E-value=3.7 Score=40.40 Aligned_cols=27 Identities=33% Similarity=0.484 Sum_probs=21.9
Q ss_pred cchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 27 FGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 27 ~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
.|--..+..++++|+++||+|++++..
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 455666779999999999999999775
No 205
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=87.76 E-value=44 Score=36.10 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=32.4
Q ss_pred CCCeEEC--CCCCCHH-HHHhh--cCEEEec--CChhH----HHHHHHcCCcEEEEeCCC
Q 002206 261 PPNFIKL--PKDAYTP-DFMAA--SDCMLGK--IGYGT----VSEALAYKLPFVFVRRDY 309 (953)
Q Consensus 261 p~NV~v~--~~~~~~p-dlLa~--aDlfIth--gG~~T----v~Eal~~GvP~l~iP~~~ 309 (953)
++|+... ||...+- .++.+ +|++||+ ||.|. +.-|..+|+|+|+|-++.
T Consensus 174 ~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 174 SDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred hhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 4565543 4443333 67764 9999997 33323 445778899999999874
No 206
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=87.02 E-value=1.3 Score=52.25 Aligned_cols=68 Identities=19% Similarity=0.180 Sum_probs=51.7
Q ss_pred CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 002206 272 YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (953)
Q Consensus 272 ~~pdlLa~aDlfIthg---G~~-Tv~Eal~~GvP----~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al 343 (953)
.++.+++.+|+|+..+ |+| ++.|+++||+| +|+....+..++ + +.|+.+++.| ++.+.++|
T Consensus 348 el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~------l---~~gllVnP~d--~~~lA~aI 416 (456)
T TIGR02400 348 ELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE------L---NGALLVNPYD--IDGMADAI 416 (456)
T ss_pred HHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH------h---CCcEEECCCC--HHHHHHHH
Confidence 3558889999999744 654 78899999999 887765544443 3 2578888877 46899999
Q ss_pred HHHHhCC
Q 002206 344 ERAISLK 350 (953)
Q Consensus 344 ~~ll~~~ 350 (953)
.++++++
T Consensus 417 ~~aL~~~ 423 (456)
T TIGR02400 417 ARALTMP 423 (456)
T ss_pred HHHHcCC
Confidence 9999765
No 207
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=86.22 E-value=64 Score=36.33 Aligned_cols=84 Identities=12% Similarity=0.173 Sum_probs=50.1
Q ss_pred CCcEEEEEcCCCCc--hH------hHHHhhCCCCcEEEEeCCCC--C-----C----CCC-CeE-ECCCCC--CHHHHHh
Q 002206 222 DVKLLILNFGGQPA--GW------KLKEEYLPSGWKCLVCGASD--S-----Q----LPP-NFI-KLPKDA--YTPDFMA 278 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~--~~------~ll~~ll~~~~~~vv~G~~~--~-----~----lp~-NV~-v~~~~~--~~pdlLa 278 (953)
+++.|.+..|+... .| ++.+.+...++.++++|... + . .+. ++. +.+..+ .+..+++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 259 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALID 259 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHH
Confidence 45677787776543 12 23333444456667766422 1 0 122 232 223322 2337778
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002206 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (953)
Q Consensus 279 ~aDlfIthgG~~Tv~Eal~~GvP~l~iP 306 (953)
.||+|||. --|.+.=|.+.|+|+|.+=
T Consensus 260 ~a~l~Vs~-DSGp~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 260 HARLFIGV-DSVPMHMAAALGTPLVALF 286 (344)
T ss_pred hCCEEEec-CCHHHHHHHHcCCCEEEEE
Confidence 99999995 4478889999999999984
No 208
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=85.35 E-value=72 Score=36.11 Aligned_cols=84 Identities=10% Similarity=0.225 Sum_probs=49.0
Q ss_pred CCcEEEEEcCCCCc--hH------hHHHhhCCCCcEEEEeC-CCCCC------C----C-CCe-EECCCCC--CHHHHHh
Q 002206 222 DVKLLILNFGGQPA--GW------KLKEEYLPSGWKCLVCG-ASDSQ------L----P-PNF-IKLPKDA--YTPDFMA 278 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~--~~------~ll~~ll~~~~~~vv~G-~~~~~------l----p-~NV-~v~~~~~--~~pdlLa 278 (953)
+.+.|.+..|+... .| ++...+...+..++++| +...+ + + .++ -..+... .+..+|+
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 34677788776533 12 22223433456666664 33211 1 1 122 2233332 2337888
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002206 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (953)
Q Consensus 279 ~aDlfIthgG~~Tv~Eal~~GvP~l~iP 306 (953)
.||+|||.=. |-+.=|.+.|+|+|++=
T Consensus 262 ~a~l~v~nDS-Gp~HlAaA~g~P~v~lf 288 (352)
T PRK10422 262 HAQLFIGVDS-APAHIAAAVNTPLICLF 288 (352)
T ss_pred hCCEEEecCC-HHHHHHHHcCCCEEEEE
Confidence 9999999544 67888999999999974
No 209
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=85.14 E-value=71 Score=35.93 Aligned_cols=83 Identities=23% Similarity=0.434 Sum_probs=53.2
Q ss_pred CcEEEEEcC-CCCc--hH------hHHHhhCCCCcEEEEeCCCCCC---------CCCCeEECCCCC--CHHHHHhhcCE
Q 002206 223 VKLLILNFG-GQPA--GW------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFIKLPKDA--YTPDFMAASDC 282 (953)
Q Consensus 223 ~~vVlvs~G-s~~~--~~------~ll~~ll~~~~~~vv~G~~~~~---------lp~NV~v~~~~~--~~pdlLa~aDl 282 (953)
++.|++..| +.+. .+ ++.+.+....+.++++|...+. .+..+.+.+... .+..+++.||+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 578888888 5533 11 2333444455788888765421 222332444432 23477789999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEe
Q 002206 283 MLGKIGYGTVSEALAYKLPFVFVR 306 (953)
Q Consensus 283 fIthgG~~Tv~Eal~~GvP~l~iP 306 (953)
|||.=. |-+.=|.+.|+|+|++=
T Consensus 255 ~I~~DS-g~~HlAaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS-GPMHLAAALGTPTIALY 277 (334)
T ss_pred EEccCC-hHHHHHHHcCCCEEEEE
Confidence 998433 67888999999999985
No 210
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=85.06 E-value=4 Score=42.20 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=23.3
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
+||+ +.--|. +..-..+|+++|.+.||+|+++.+.
T Consensus 2 ~ILl-TNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~ 36 (196)
T PF01975_consen 2 RILL-TNDDGI-DAPGIRALAKALSALGHDVVVVAPD 36 (196)
T ss_dssp EEEE-E-SS-T-TSHHHHHHHHHHTTTSSEEEEEEES
T ss_pred eEEE-EcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 4543 344443 3344678999998888999999775
No 211
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.09 E-value=2.8 Score=45.27 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=52.4
Q ss_pred HHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCch--HHHHHHHHH-cCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 273 TPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEE--PFLRNMLEF-YQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 273 ~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ--~~NA~~l~~-~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
+.|+|.++|+.|+.+| ..+-.++-.|||+|.+| +.+-| +.-|++-.+ .|+.+.+-.+.-. .-..+.++++.+
T Consensus 305 fadiLH~adaalgmAG-TAtEQavGLGkPvi~fP--g~GPQy~pgFA~rQ~rLLG~sltlv~~~aq--~a~~~~q~ll~d 379 (412)
T COG4370 305 FADILHAADAALGMAG-TATEQAVGLGKPVIGFP--GQGPQYNPGFAERQQRLLGASLTLVRPEAQ--AAAQAVQELLGD 379 (412)
T ss_pred HHHHHHHHHHHHHhcc-chHHHhhccCCceeecC--CCCCCcChHHHHHHHHHhcceeeecCCchh--hHHHHHHHHhcC
Confidence 4599999999999999 67778999999999999 55555 233444333 5888777654432 223344558888
Q ss_pred CCC
Q 002206 350 KPC 352 (953)
Q Consensus 350 ~~~ 352 (953)
+.+
T Consensus 380 p~r 382 (412)
T COG4370 380 PQR 382 (412)
T ss_pred hHH
Confidence 754
No 212
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=81.37 E-value=1.4 Score=52.04 Aligned_cols=68 Identities=18% Similarity=0.182 Sum_probs=49.6
Q ss_pred CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 002206 272 YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (953)
Q Consensus 272 ~~pdlLa~aDlfIthg---G~~-Tv~Eal~~GvP----~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al 343 (953)
.++.+++.||+||.-+ |+| ++.||+++|+| +|+....+..++ ...|+.+++.+. +.+.++|
T Consensus 353 el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---------~~~g~lv~p~d~--~~la~ai 421 (460)
T cd03788 353 ELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---------LSGALLVNPYDI--DEVADAI 421 (460)
T ss_pred HHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---------cCCCEEECCCCH--HHHHHHH
Confidence 4568899999999632 544 78899999999 666543343333 234777887764 6899999
Q ss_pred HHHHhCC
Q 002206 344 ERAISLK 350 (953)
Q Consensus 344 ~~ll~~~ 350 (953)
.++++++
T Consensus 422 ~~~l~~~ 428 (460)
T cd03788 422 HRALTMP 428 (460)
T ss_pred HHHHcCC
Confidence 9999766
No 213
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=78.61 E-value=5 Score=47.97 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=45.1
Q ss_pred HHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEecCCC-----ChhhHHHHHH
Q 002206 275 DFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRDL-----LTGHWKPYLE 344 (953)
Q Consensus 275 dlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~-G~g~~l~~~dl-----~~~~l~~al~ 344 (953)
++++.||+||.-+ |+ .++.||+++|+|+|.....++.+= .-+.+... ..|+.+...+. ..+.+.++|.
T Consensus 470 E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~--v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~ 547 (590)
T cd03793 470 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCF--MEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMY 547 (590)
T ss_pred HHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhh--hHHHhccCCCceEEEecCCccchHHHHHHHHHHHH
Confidence 7888999999743 43 499999999999999997666422 11112212 25777753332 2345555666
Q ss_pred HHH
Q 002206 345 RAI 347 (953)
Q Consensus 345 ~ll 347 (953)
+++
T Consensus 548 ~~~ 550 (590)
T cd03793 548 EFC 550 (590)
T ss_pred HHh
Confidence 655
No 214
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.41 E-value=6.2 Score=42.92 Aligned_cols=48 Identities=21% Similarity=0.335 Sum_probs=36.6
Q ss_pred CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC
Q 002206 262 PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF 310 (953)
Q Consensus 262 ~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~ 310 (953)
.++.+....-.+.++|.+||.+||-.+ ++-.||+.+|+|++++-.+.+
T Consensus 182 ~~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~~~Y 229 (269)
T PF05159_consen 182 PNVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGRAFY 229 (269)
T ss_pred CCeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecCccc
Confidence 344443333356799999999999777 788999999999999875543
No 215
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=72.91 E-value=18 Score=42.88 Aligned_cols=136 Identities=21% Similarity=0.256 Sum_probs=85.0
Q ss_pred hHHHHHHhCCCCCCc-EEEEEcCCCCch--HhH----HHhhCCCCcEEEEeCCCCCC-----------CCCCeEE-CCCC
Q 002206 210 RKEVRKELGIEDDVK-LLILNFGGQPAG--WKL----KEEYLPSGWKCLVCGASDSQ-----------LPPNFIK-LPKD 270 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~-vVlvs~Gs~~~~--~~l----l~~ll~~~~~~vv~G~~~~~-----------lp~NV~v-~~~~ 270 (953)
+..+++.++++.+.+ .++...|..... ..+ +..++...+++++.|...+. .|.++.+ .+|.
T Consensus 279 k~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~ 358 (487)
T COG0297 279 KVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYD 358 (487)
T ss_pred HHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeec
Confidence 345777888874444 455555555542 222 22344556889998877532 3555554 2333
Q ss_pred CCHH-HHHhhcCEEEe-----cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHH--HHHcCcEEEEecCCCChhhHHHH
Q 002206 271 AYTP-DFMAASDCMLG-----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM--LEFYQGGVEMIRRDLLTGHWKPY 342 (953)
Q Consensus 271 ~~~p-dlLa~aDlfIt-----hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~--l~~~G~g~~l~~~dl~~~~l~~a 342 (953)
.-+. .+++.+|+|+- -|| .|-+++|.+|.+-|+.+.++-.|--..... ....|.|+.+... +++.+..+
T Consensus 359 ~~la~~i~agaD~~lmPSrfEPcG-L~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~--~~~~l~~a 435 (487)
T COG0297 359 EPLAHLIYAGADVILMPSRFEPCG-LTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQT--NPDHLANA 435 (487)
T ss_pred HHHHHHHHhcCCEEEeCCcCcCCc-HHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecC--CHHHHHHH
Confidence 2222 56677999995 357 589999999998888887665554221111 2445777777655 67889999
Q ss_pred HHHHHh
Q 002206 343 LERAIS 348 (953)
Q Consensus 343 l~~ll~ 348 (953)
|.+.+.
T Consensus 436 l~rA~~ 441 (487)
T COG0297 436 LRRALV 441 (487)
T ss_pred HHHHHH
Confidence 988774
No 216
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=72.19 E-value=18 Score=38.58 Aligned_cols=83 Identities=22% Similarity=0.220 Sum_probs=50.7
Q ss_pred HHHhhcCEEEecCC-hhHHHHHHHcCCcEEEEeCCCCC-chH-HHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 275 DFMAASDCMLGKIG-YGTVSEALAYKLPFVFVRRDYFN-EEP-FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 275 dlLa~aDlfIthgG-~~Tv~Eal~~GvP~l~iP~~~~~-DQ~-~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
++|+++|.+|..+. -+-.+||++.|+|+-.+-.+.++ +-+ .=.+.|++.+++...+.+.+ ++++.
T Consensus 240 ~~La~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~-------~~e~y----- 307 (329)
T COG3660 240 DMLAAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNL-------ALEEY----- 307 (329)
T ss_pred HHHhhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCcchh-------hhccc-----
Confidence 99999999998765 45678999999999887644442 111 12344555666554443221 11111
Q ss_pred CccCCCCHHHHHHHHHHHH
Q 002206 352 CYEGGINGGEVAAHILQET 370 (953)
Q Consensus 352 ~~~~~~~g~~~~A~~i~~~ 370 (953)
.| ...+-++++|..|...
T Consensus 308 sy-~PLnEt~RiA~~Ira~ 325 (329)
T COG3660 308 SY-KPLNETERIAEEIRAE 325 (329)
T ss_pred cc-CCchHHHHHHHHHHHH
Confidence 11 3567777888777654
No 217
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=72.13 E-value=1.1e+02 Score=32.96 Aligned_cols=151 Identities=20% Similarity=0.195 Sum_probs=80.2
Q ss_pred HHHHHcCCCcEEE-ECCCch------HHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhhccccceEEe
Q 002206 111 VEWLNSIKADLVV-SDVVPV------ACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIR 183 (953)
Q Consensus 111 ~~~L~~~kpDlVV-~D~~~~------~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 183 (953)
.+++++.++|+|| ..|+++ +..++..+|||++-+..-.|... ..+
T Consensus 59 ~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eRp~~~~~------------------------~~~---- 110 (249)
T PF02571_consen 59 AEFLRENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFERPSWQPE------------------------PDD---- 110 (249)
T ss_pred HHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEcCCcccC------------------------CCC----
Confidence 4567888999999 556555 34567788999988744332100 001
Q ss_pred cCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCchHhHHHhhCC-CCcEEEEeCCCCCC--C
Q 002206 184 LPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCLVCGASDSQ--L 260 (953)
Q Consensus 184 ~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~~~ll~~ll~-~~~~~vv~G~~~~~--l 260 (953)
+.+.+. +-+++.+.+.. ...+.||++.|+..-+ .+...... ..+.+.+.-..... +
T Consensus 111 -----------~~~~v~--------~~~eA~~~l~~-~~~~~iflttGsk~L~-~f~~~~~~~~r~~~RvLp~~~~~~g~ 169 (249)
T PF02571_consen 111 -----------NWHYVD--------SYEEAAELLKE-LGGGRIFLTTGSKNLP-PFVPAPLPGERLFARVLPTPESALGF 169 (249)
T ss_pred -----------eEEEeC--------CHHHHHHHHhh-cCCCCEEEeCchhhHH-HHhhcccCCCEEEEEECCCccccCCC
Confidence 111121 11233333321 1335799999976542 22221111 12233333211112 2
Q ss_pred -CCCeEEC--CCCCCHH-HHHhh--cCEEEecC-ChhH----HHHHHHcCCcEEEEeCCCC
Q 002206 261 -PPNFIKL--PKDAYTP-DFMAA--SDCMLGKI-GYGT----VSEALAYKLPFVFVRRDYF 310 (953)
Q Consensus 261 -p~NV~v~--~~~~~~p-dlLa~--aDlfIthg-G~~T----v~Eal~~GvP~l~iP~~~~ 310 (953)
+.|+... ||...+- .++.+ +|++||+- |..+ +.-|..+|+|+|+|-++..
T Consensus 170 ~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~ 230 (249)
T PF02571_consen 170 PPKNIIAMQGPFSKELNRALFRQYGIDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPE 230 (249)
T ss_pred ChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC
Confidence 4565543 4443333 66664 99999973 2223 4458899999999998743
No 218
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=71.38 E-value=7.6 Score=49.12 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=49.8
Q ss_pred HHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHH
Q 002206 274 PDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (953)
Q Consensus 274 pdlLa~aDlfIthg---G~~-Tv~Eal~~GvP----~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ 345 (953)
+.+++.||+||.-+ |+| ++.|+++||+| +|+-...+..++ + ...|+.+++.|. +.+.++|.+
T Consensus 370 ~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~------l--~~~allVnP~D~--~~lA~AI~~ 439 (797)
T PLN03063 370 CALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS------L--GAGALLVNPWNI--TEVSSAIKE 439 (797)
T ss_pred HHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh------h--cCCeEEECCCCH--HHHHHHHHH
Confidence 47888999999754 776 68899999999 555444444443 2 126889998875 689999999
Q ss_pred HHhCC
Q 002206 346 AISLK 350 (953)
Q Consensus 346 ll~~~ 350 (953)
+|+.+
T Consensus 440 aL~m~ 444 (797)
T PLN03063 440 ALNMS 444 (797)
T ss_pred HHhCC
Confidence 99855
No 219
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=69.25 E-value=41 Score=36.27 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=32.7
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
++++...+|.|..+.+.++|..+++.|+.|.+++..+.
T Consensus 2 ~~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~ 39 (254)
T cd00550 2 YIFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPA 39 (254)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCc
Confidence 44566778899999999999999999999999987764
No 220
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=69.10 E-value=47 Score=37.19 Aligned_cols=80 Identities=15% Similarity=0.129 Sum_probs=60.3
Q ss_pred CCeEECCCCCCHH-----HHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecC
Q 002206 262 PNFIKLPKDAYTP-----DFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRR 332 (953)
Q Consensus 262 ~NV~v~~~~~~~p-----dlLa~aDlfIth----gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~ 332 (953)
+|+.++. ++|| ++|+.||+.|-. -|.|+++=.+.+|+|+++-... .--+.+.+.|.-+....+
T Consensus 245 ~~~~iL~--e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~n------p~~~~l~~~~ipVlf~~d 316 (360)
T PF07429_consen 245 ENFQILT--EFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRDN------PFWQDLKEQGIPVLFYGD 316 (360)
T ss_pred cceeEhh--hhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecCC------hHHHHHHhCCCeEEeccc
Confidence 5777642 2344 677889999964 3899999999999999996522 224568888999888888
Q ss_pred CCChhhHHHHHHHHHhC
Q 002206 333 DLLTGHWKPYLERAISL 349 (953)
Q Consensus 333 dl~~~~l~~al~~ll~~ 349 (953)
+++...+.++=+++...
T Consensus 317 ~L~~~~v~ea~rql~~~ 333 (360)
T PF07429_consen 317 ELDEALVREAQRQLANV 333 (360)
T ss_pred cCCHHHHHHHHHHHhhC
Confidence 99888888777777643
No 221
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=68.55 E-value=4.4 Score=48.58 Aligned_cols=76 Identities=8% Similarity=0.010 Sum_probs=55.6
Q ss_pred CCeEECCCCC--CHHHHHhhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCCh
Q 002206 262 PNFIKLPKDA--YTPDFMAASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (953)
Q Consensus 262 ~NV~v~~~~~--~~pdlLa~aDlfIth---gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~ 336 (953)
..|.+.++.. .+-..+..+.++|.- .|+++.+||+.+|+|+| .+ +- ...++...-|..+ .+ .
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--ny-g~------~~~V~d~~NG~li--~d--~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NK-VE------TDYVEHNKNGYII--DD--I 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ec-CC------ceeeEcCCCcEEe--CC--H
Confidence 5677777766 556778889999964 48889999999999999 31 11 2235555567767 33 4
Q ss_pred hhHHHHHHHHHhCC
Q 002206 337 GHWKPYLERAISLK 350 (953)
Q Consensus 337 ~~l~~al~~ll~~~ 350 (953)
..+..+|..+|.++
T Consensus 476 ~~l~~al~~~L~~~ 489 (519)
T TIGR03713 476 SELLKALDYYLDNL 489 (519)
T ss_pred HHHHHHHHHHHhCH
Confidence 58889999999776
No 222
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=68.52 E-value=13 Score=40.19 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=70.2
Q ss_pred EEEEEcCCCCc--hH-hHHHh---hCC--CCcEEEEeCCCCC-------C-----CCCCeEECCCCC--CHHHHHhhcCE
Q 002206 225 LLILNFGGQPA--GW-KLKEE---YLP--SGWKCLVCGASDS-------Q-----LPPNFIKLPKDA--YTPDFMAASDC 282 (953)
Q Consensus 225 vVlvs~Gs~~~--~~-~ll~~---ll~--~~~~~vv~G~~~~-------~-----lp~NV~v~~~~~--~~pdlLa~aDl 282 (953)
.+++..|.... +. .+... +.. +++.+.+.|.... . ...++...++.+ .++.+++.+|+
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 279 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADV 279 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCE
Confidence 56677776544 22 22222 221 1256666666543 1 236777777665 35577888999
Q ss_pred EEec---CChh-HHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 283 MLGK---IGYG-TVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 283 fIth---gG~~-Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++.. -|++ ++.|++++|+|+|..+.+... +.+...+.|...... ..+.+..++..++++.
T Consensus 280 ~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~------e~~~~~~~g~~~~~~--~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 280 FVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIP------EVVEDGETGLLVPPG--DVEELADALEQLLEDP 343 (381)
T ss_pred EEeccccccchHHHHHHHhcCCcEEECCCCChH------HHhcCCCceEecCCC--CHHHHHHHHHHHhcCH
Confidence 9976 2443 469999999999998754222 223333345533333 3568888888887654
No 223
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=65.58 E-value=8.7 Score=43.82 Aligned_cols=97 Identities=18% Similarity=0.293 Sum_probs=49.2
Q ss_pred hHHHHHHhCCCCCCcEEEEEc--C--CCC-----c--h--HhHHHhhCCCCcEEEEeCCC-----CC---CCCCCeEECC
Q 002206 210 RKEVRKELGIEDDVKLLILNF--G--GQP-----A--G--WKLKEEYLPSGWKCLVCGAS-----DS---QLPPNFIKLP 268 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~--G--s~~-----~--~--~~ll~~ll~~~~~~vv~G~~-----~~---~lp~NV~v~~ 268 (953)
.+.+++.++++.++++|+.+- . ... . . ..-+..+...++.+++--.. .. ....++..+.
T Consensus 179 ~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~ 258 (369)
T PF04464_consen 179 RNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVS 258 (369)
T ss_dssp HHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SHHHHTT----TT-TTTEEE-T
T ss_pred HHHHHHHhccCCCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCchhhhchhhhhccCCcEEECC
Confidence 456777888876776666652 1 111 0 0 11111234456655542110 01 1246776654
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 002206 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (953)
Q Consensus 269 ~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~ 307 (953)
....+.++|..+|++||--. +.+.|.+.+++|+|+...
T Consensus 259 ~~~~~~~ll~~aDiLITDyS-Si~fD~~~l~KPiify~~ 296 (369)
T PF04464_consen 259 DNEDIYDLLAAADILITDYS-SIIFDFLLLNKPIIFYQP 296 (369)
T ss_dssp T-S-HHHHHHT-SEEEESS--THHHHHGGGT--EEEE-T
T ss_pred CCCCHHHHHHhcCEEEEech-hHHHHHHHhCCCEEEEec
Confidence 43456699999999999765 678899999999998863
No 224
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=64.06 E-value=21 Score=41.66 Aligned_cols=72 Identities=13% Similarity=0.196 Sum_probs=57.0
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEE-EecCCCChhhHHHHHHHHHhCCCC
Q 002206 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAISLKPC 352 (953)
Q Consensus 275 dlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~-l~~~dl~~~~l~~al~~ll~~~~~ 352 (953)
.++++||++|+. =+=++.=|+..|+|++.+++ | +.....+...|..-. ++.++++.+.+.+.+.+++++.+.
T Consensus 323 ~iIs~~dl~ig~-RlHa~I~a~~~gvP~i~i~Y----~-~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~ 395 (426)
T PRK10017 323 KILGACELTVGT-RLHSAIISMNFGTPAIAINY----E-HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPA 395 (426)
T ss_pred HHHhhCCEEEEe-cchHHHHHHHcCCCEEEeee----h-HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHHH
Confidence 678899999983 33467779999999999984 2 466777888888755 677888888999999999977643
No 225
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=61.94 E-value=25 Score=38.69 Aligned_cols=78 Identities=21% Similarity=0.120 Sum_probs=56.6
Q ss_pred CCeEECCCCCCHH-----HHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecC
Q 002206 262 PNFIKLPKDAYTP-----DFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRR 332 (953)
Q Consensus 262 ~NV~v~~~~~~~p-----dlLa~aDlfIth----gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~ 332 (953)
+|+.++. +.|| ++|+.||+.|-. =|.||++=.+.+|+|+++-....+. +.+.+.|+-+..+.+
T Consensus 206 ~~~~~L~--e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~fw------qdl~e~gv~Vlf~~d 277 (322)
T PRK02797 206 ENFQILT--EKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPFW------QDLTEQGLPVLFTGD 277 (322)
T ss_pred ccEEehh--hhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCchH------HHHHhCCCeEEecCC
Confidence 7888752 3344 677899999864 3899999999999999997532221 247788999888888
Q ss_pred CCChhhHHHHHHHHH
Q 002206 333 DLLTGHWKPYLERAI 347 (953)
Q Consensus 333 dl~~~~l~~al~~ll 347 (953)
.++...+.++=+++.
T Consensus 278 ~L~~~~v~e~~rql~ 292 (322)
T PRK02797 278 DLDEDIVREAQRQLA 292 (322)
T ss_pred cccHHHHHHHHHHHH
Confidence 887666666544443
No 226
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=59.61 E-value=42 Score=35.97 Aligned_cols=24 Identities=38% Similarity=0.495 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 29 HATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 29 H~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
|.-=..+|+++|+ .+++|+++.+.
T Consensus 12 ~a~Gi~aL~~al~-~~~dV~VVAP~ 35 (252)
T COG0496 12 HAPGIRALARALR-EGADVTVVAPD 35 (252)
T ss_pred CCHHHHHHHHHHh-hCCCEEEEccC
Confidence 3334678899999 89999999775
No 227
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=59.32 E-value=46 Score=33.57 Aligned_cols=38 Identities=5% Similarity=-0.110 Sum_probs=25.6
Q ss_pred HHHHHHHc--CCCcEEEECCCch-HHHHHHHh-CCcEEEEec
Q 002206 109 DEVEWLNS--IKADLVVSDVVPV-ACRAAADA-GIRSVCVTN 146 (953)
Q Consensus 109 ~~~~~L~~--~kpDlVV~D~~~~-~~~~A~~~-giP~I~is~ 146 (953)
.....|++ +.||+|+++.-+. ++.+-..+ ++|.|+..-
T Consensus 55 ~a~~~L~~~Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 55 RAARQLRAQGFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred HHHHHHHHcCCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 33444554 7899999998544 44455566 899998743
No 228
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=58.74 E-value=20 Score=35.90 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=27.4
Q ss_pred HHHHHHHHcCCCcEEEECCCchHHH-HH-----HHh-CCcEEE-EecCC
Q 002206 108 KDEVEWLNSIKADLVVSDVVPVACR-AA-----ADA-GIRSVC-VTNFS 148 (953)
Q Consensus 108 ~~~~~~L~~~kpDlVV~D~~~~~~~-~A-----~~~-giP~I~-is~~~ 148 (953)
....++|++.+||+||+.+++++.. ++ ... ++|+++ +++|.
T Consensus 79 ~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~ 127 (169)
T PF06925_consen 79 RRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFD 127 (169)
T ss_pred HHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCC
Confidence 3446778899999999998664443 32 223 588764 47773
No 229
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=58.28 E-value=1.3e+02 Score=32.47 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=23.5
Q ss_pred eEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 15 ~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
+|+||+ +.--|. |..-..+|+++|.+.| +|+++.+.
T Consensus 5 ~M~ILl-tNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~ 40 (257)
T PRK13932 5 KPHILV-CNDDGI-EGEGIHVLAASMKKIG-RVTVVAPA 40 (257)
T ss_pred CCEEEE-ECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCC
Confidence 467754 444442 2223568899999887 79888664
No 230
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=55.61 E-value=5.1 Score=46.90 Aligned_cols=82 Identities=18% Similarity=0.063 Sum_probs=54.1
Q ss_pred HHHhhcCEEEec-----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 275 DFMAASDCMLGK-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 275 dlLa~aDlfIth-----gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
.+++.++++... =| -++.|||+||+|+|++.-++-.|- ++..--|..+++.+-....|.+++.++.++
T Consensus 361 rl~adt~~v~~qPa~E~FG-iv~IEAMa~glPvvAt~~GGP~Ei------V~~~~tG~l~dp~~e~~~~~a~~~~kl~~~ 433 (495)
T KOG0853|consen 361 RLAADTKGVLYQPANEHFG-IVPIEAMACGLPVVATNNGGPAEI------VVHGVTGLLIDPGQEAVAELADALLKLRRD 433 (495)
T ss_pred HHHHhcceEEecCCCCCcc-ceeHHHHhcCCCEEEecCCCceEE------EEcCCcceeeCCchHHHHHHHHHHHHHhcC
Confidence 344556665543 24 489999999999999986544443 555666888887433334799999999988
Q ss_pred CCCcc-CCCCHHHHH
Q 002206 350 KPCYE-GGINGGEVA 363 (953)
Q Consensus 350 ~~~~~-~~~~g~~~~ 363 (953)
+.... ...+|.+++
T Consensus 434 p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 434 PELWARMGKNGLKRV 448 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 84322 344555443
No 231
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=55.15 E-value=1.7 Score=50.81 Aligned_cols=44 Identities=18% Similarity=0.142 Sum_probs=33.9
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|...+|.+ +++..+. +.+.+++|+|+|| ||+|||..||+.
T Consensus 378 l~~~p~~~~h~~----~~~~~~~-~~gi~~~liRlsvGlEd~~dL~~Dl~~ 423 (431)
T PRK08248 378 LIIHPASTTHQQ----LSEEEQL-AAGVTPGLVRLSVGTEAIDDILDDLRQ 423 (431)
T ss_pred eeeCCCcCcccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 445555666665 6666555 6788999999999 999999999875
No 232
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=55.03 E-value=4.2 Score=47.66 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=32.3
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|....|.+ +++..+. +.+.+++|+|++| ||+|||..||+.
T Consensus 382 Li~~p~~~~h~~----~~~~~~~-~~gi~~~liRlSvGlEd~~dli~dl~~ 427 (436)
T PRK07812 382 LVIHPASTTHSQ----LTPEEQL-ATGVTPGLVRLAVGIEGIDDILADLEA 427 (436)
T ss_pred eeeCCCCCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 344455555554 5555544 6777899999999 999999999876
No 233
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=51.68 E-value=2.2 Score=49.70 Aligned_cols=46 Identities=17% Similarity=0.123 Sum_probs=34.3
Q ss_pred CcccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 402 GRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 402 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+.+..|....|.+ +++..+. +.+.+++|+|+|| ||+|||..||+.
T Consensus 368 ~sl~~~~~~~~h~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 415 (418)
T TIGR01326 368 KSLVIHPASTTHQQ----LSEEEQL-KAGVTPGLIRLSVGIENIDDIIADLEQ 415 (418)
T ss_pred CceeeCCCCCCccc----CCHHHHH-hcCCCCCeEEEEecCCCHHHHHHHHHH
Confidence 33455566666665 6655555 6778899999999 999999999864
No 234
>PLN02509 cystathionine beta-lyase
Probab=51.47 E-value=2.2 Score=50.29 Aligned_cols=44 Identities=23% Similarity=0.266 Sum_probs=34.3
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|+..++.+ +++..+. +.+.+++|+|++| ||+|||..||+.
T Consensus 412 Li~~p~~~sh~~----~~~~~~~-~~Gi~~~liRlSvGlE~~~DLi~Dl~~ 457 (464)
T PLN02509 412 LISMPCFMSHAS----IPAEVRE-ARGLTEDLVRISAGIEDVDDLISDLDI 457 (464)
T ss_pred eeeCCccccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 455566666665 6666655 6778899999999 999999999875
No 235
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=51.31 E-value=79 Score=31.46 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=32.2
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
|++...-.|.|=.+-+..||..|++.|+.|.++...+
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~ 38 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADI 38 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4567788889999999999999999999999997654
No 236
>PRK07049 methionine gamma-lyase; Validated
Probab=50.91 E-value=2.4 Score=49.61 Aligned_cols=46 Identities=22% Similarity=0.097 Sum_probs=33.3
Q ss_pred CcccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 402 GRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 402 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+.+..|...++.+ +.+..+. +.+.+++|+|+|| ||+|||..||+.
T Consensus 375 ~sli~~~~~~~h~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 422 (427)
T PRK07049 375 ESLASHPASMTHSG----VPADVRE-RIGVLESTIRLSIGIEHPDDLIADLAQ 422 (427)
T ss_pred CceeeCCCcccccc----CCHHHHH-hcCCCcCeEEEEeCcCCHHHHHHHHHH
Confidence 34455555556654 5554444 5677899999999 999999999875
No 237
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=49.84 E-value=30 Score=30.42 Aligned_cols=54 Identities=17% Similarity=0.028 Sum_probs=36.6
Q ss_pred CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 287 IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 287 gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
+-..-+.|++++|+|+|.-+. ......+...--++.++ +.++|.++|..+++++
T Consensus 10 ~~~~r~~E~~a~G~~vi~~~~------~~~~~~~~~~~~~~~~~----~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 10 GPNMRIFEAMACGTPVISDDS------PGLREIFEDGEHIITYN----DPEELAEKIEYLLENP 63 (92)
T ss_pred CCchHHHHHHHCCCeEEECCh------HHHHHHcCCCCeEEEEC----CHHHHHHHHHHHHCCH
Confidence 334579999999999999652 23333333222454544 4678999999999877
No 238
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=49.54 E-value=71 Score=35.74 Aligned_cols=29 Identities=24% Similarity=0.359 Sum_probs=23.4
Q ss_pred CCcEEEE-CC--CchHHHHHHHhCCcEEEEec
Q 002206 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (953)
Q Consensus 118 kpDlVV~-D~--~~~~~~~A~~~giP~I~is~ 146 (953)
.||+||+ |. ...+..=|.++|||+|++.+
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivD 183 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVD 183 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEee
Confidence 6999884 54 66777789999999999954
No 239
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=49.51 E-value=6.1 Score=46.18 Aligned_cols=44 Identities=16% Similarity=0.099 Sum_probs=32.6
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|....|.+ +++..+. +.+.++.++|++| ||+|||..||+.
T Consensus 373 lv~~p~~~~h~~----~~~~~~~-~~gi~~~liR~svGlEd~~dLi~dl~~ 418 (425)
T PRK06084 373 LACHPASTTHRQ----LNDEELE-KAGVSRDMVRLSIGIEHIDDIIADLAQ 418 (425)
T ss_pred eeeCCCcCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444455666665 5555544 6777899999999 999999999875
No 240
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=49.25 E-value=2e+02 Score=32.30 Aligned_cols=40 Identities=20% Similarity=0.381 Sum_probs=32.5
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF 56 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~ 56 (953)
+|+||.--.|.|-.+-+.++|-.|++.|+.|.+++..|..
T Consensus 3 riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAh 42 (322)
T COG0003 3 RIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAH 42 (322)
T ss_pred EEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCC
Confidence 4555666666999999999999999999889888877643
No 241
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=48.81 E-value=2.4 Score=48.73 Aligned_cols=43 Identities=26% Similarity=0.287 Sum_probs=30.4
Q ss_pred cCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+..|.-.++.+ ++|..+. +.+-+++|+|+|| ||+|||..||+.
T Consensus 330 ~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~ 374 (380)
T PRK06176 330 VGIPAFMTHAC----IPKEQRE-AAGIRDGLVRLSVGIEHEQDLLEDLEQ 374 (380)
T ss_pred eeCCccccccc----CCHHHHH-hcCCCcCeEEEEeccCCHHHHHHHHHH
Confidence 33344444444 4454444 5677899999999 999999999875
No 242
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=47.23 E-value=39 Score=39.59 Aligned_cols=79 Identities=13% Similarity=0.132 Sum_probs=53.7
Q ss_pred CCeEECCC-CC-CHHHHHhhcCEEEe--c--CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCC
Q 002206 262 PNFIKLPK-DA-YTPDFMAASDCMLG--K--IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLL 335 (953)
Q Consensus 262 ~NV~v~~~-~~-~~pdlLa~aDlfIt--h--gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~ 335 (953)
+|++.++- .+ .+.+++..||+++. | +-..++.||+.+|+|++.......+. ..... |-.+...+
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~-----~~i~~---g~l~~~~~-- 397 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNR-----DFIAS---ENIFEHNE-- 397 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCc-----ccccC---CceecCCC--
Confidence 67766543 44 45588899999984 3 34569999999999999987432221 11222 44455555
Q ss_pred hhhHHHHHHHHHhCC
Q 002206 336 TGHWKPYLERAISLK 350 (953)
Q Consensus 336 ~~~l~~al~~ll~~~ 350 (953)
.+.+.++|.++|+++
T Consensus 398 ~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 398 VDQLISKLKDLLNDP 412 (438)
T ss_pred HHHHHHHHHHHhcCH
Confidence 468888999998776
No 243
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=46.54 E-value=3.1 Score=48.23 Aligned_cols=44 Identities=18% Similarity=0.064 Sum_probs=32.6
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|....+.+ +++..+. +.+.+++++|+|| ||+|||..||+.
T Consensus 344 l~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 389 (398)
T PRK08249 344 IYGPARTTSHVE----NTLEERA-ALGIPEGLVRISVGIEDTEDLIADLEQ 389 (398)
T ss_pred eeeCCccccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444455555554 5555555 5677899999999 999999999875
No 244
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=46.25 E-value=1e+02 Score=32.58 Aligned_cols=84 Identities=20% Similarity=0.293 Sum_probs=46.8
Q ss_pred CCCcEEEEEcCCCCch--H------hHHHhhCCCCcEEEEeCCCCC--C---------CCC-CeEECCCCCCHH---HHH
Q 002206 221 DDVKLLILNFGGQPAG--W------KLKEEYLPSGWKCLVCGASDS--Q---------LPP-NFIKLPKDAYTP---DFM 277 (953)
Q Consensus 221 ~~~~vVlvs~Gs~~~~--~------~ll~~ll~~~~~~vv~G~~~~--~---------lp~-NV~v~~~~~~~p---dlL 277 (953)
.+++.|.+..|+.... + ++.+.+....+.++++|.... . .+. .+.+.+.. .+. .++
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~e~~ali 181 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKT-SLRELAALI 181 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS--HHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCC-CHHHHHHHH
Confidence 3667788887766542 1 233345444456677665443 1 122 34444433 344 677
Q ss_pred hhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 002206 278 AASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (953)
Q Consensus 278 a~aDlfIthgG~~Tv~Eal~~GvP~l~iP 306 (953)
+.||+|||.=. |.+.=|.+.|+|+|++=
T Consensus 182 ~~a~~~I~~Dt-g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 182 SRADLVIGNDT-GPMHLAAALGTPTVALF 209 (247)
T ss_dssp HTSSEEEEESS-HHHHHHHHTT--EEEEE
T ss_pred hcCCEEEecCC-hHHHHHHHHhCCEEEEe
Confidence 88999999554 78999999999999983
No 245
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=45.30 E-value=3 Score=48.33 Aligned_cols=44 Identities=20% Similarity=0.157 Sum_probs=31.9
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|....|.+ +++..+. +.+.+++++|+|| ||+|||..||+.
T Consensus 346 l~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 391 (398)
T PRK07504 346 LITHPATTTHKN----LSPEARA-ELGISEGFLRLSAGLEDTDDLIEDLAA 391 (398)
T ss_pred eeeCCCCCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 444455555554 5555544 5677899999999 999999999875
No 246
>PRK06434 cystathionine gamma-lyase; Validated
Probab=45.16 E-value=2.8 Score=48.20 Aligned_cols=44 Identities=23% Similarity=0.242 Sum_probs=32.1
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|....|.+ +++..+. +.+-+++|+|++| ||+|||..||+.
T Consensus 335 l~~~p~~~~h~~----~~~e~~~-~~gi~~~liRlsvGlEd~~dLi~dl~~ 380 (384)
T PRK06434 335 LITLPVETSHSS----LSPEERE-RLGISDNLVRFSIGIEDIDDLIKDIEN 380 (384)
T ss_pred eeECCCcccccc----CCHHHHH-hcCCCcCeEEEEeCcCCHHHHHHHHHH
Confidence 344455555554 5555554 6777899999999 999999999864
No 247
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=44.87 E-value=3.3 Score=47.78 Aligned_cols=44 Identities=20% Similarity=0.180 Sum_probs=31.7
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|...++.+ +++..+. +.+.+++++|++| ||+|||..||+.
T Consensus 333 l~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 378 (386)
T PRK08045 333 LISHAATMTHAG----MAPEARA-AAGISETLLRISTGIEDGEDLIADLEN 378 (386)
T ss_pred eEeCCCCccccc----CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 344455555554 4454444 6677899999999 999999999875
No 248
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=43.23 E-value=3.7 Score=47.37 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=32.3
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
-+..|..+.|.+ +++..+. +.+.+++++|++| ||.|||..||+.
T Consensus 341 l~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 386 (390)
T PRK08133 341 TITHPATTTHGR----LSPEARA-AAGITEGLIRVAVGLEDVADIKADLAR 386 (390)
T ss_pred eeecCCCCCccc----CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 444555555555 5554444 6677899999999 999999999875
No 249
>PRK06767 methionine gamma-lyase; Provisional
Probab=42.44 E-value=4.6 Score=46.58 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=30.7
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|....+.. +++..+. +.+.++.++|+|| ||+|||..||+.
T Consensus 336 l~~~p~~~~~~~----~~~~~~~-~~gi~~~l~R~svGlE~~~dl~~dl~~ 381 (386)
T PRK06767 336 LIQHPATMTHAA----IPAELRQ-EMGIYDNLIRLSVGLESWEDIVSDLEQ 381 (386)
T ss_pred cccCCCcccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 334444444444 4444444 5667889999999 999999999875
No 250
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=42.24 E-value=3.6 Score=47.38 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=25.7
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQGL 453 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 453 (953)
+++..+. +.+.+.+++|+|| ||+|||..||+..
T Consensus 346 ~~~~~~~-~~gi~~~liRlsvGlE~~~dli~Dl~~a 380 (388)
T PRK08861 346 MGEEALA-EAGVSQQLLRLSVGLEDAQDLIADLDQA 380 (388)
T ss_pred cCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 4444444 5667889999999 9999999998763
No 251
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=42.23 E-value=72 Score=33.95 Aligned_cols=29 Identities=24% Similarity=0.361 Sum_probs=23.0
Q ss_pred CcEEE-ECC--CchHHHHHHHhCCcEEEEecC
Q 002206 119 ADLVV-SDV--VPVACRAAADAGIRSVCVTNF 147 (953)
Q Consensus 119 pDlVV-~D~--~~~~~~~A~~~giP~I~is~~ 147 (953)
||+++ +|. .-.+..=|.++|||+|.+.+.
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDT 188 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDT 188 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecC
Confidence 99888 465 556777799999999999543
No 252
>PRK07671 cystathionine beta-lyase; Provisional
Probab=41.85 E-value=3.9 Score=47.00 Aligned_cols=44 Identities=30% Similarity=0.254 Sum_probs=31.5
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|....+.+ +.+..+. +.+.++.++|+|| ||+|||..||+.
T Consensus 329 l~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 374 (377)
T PRK07671 329 LISIPSQMTHAS----IPADRRK-ELGITDGLIRISVGIEDGEDLIEDLAQ 374 (377)
T ss_pred EeECCCcccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 344455555554 4454444 6677899999999 999999999864
No 253
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=41.33 E-value=1.4e+02 Score=35.16 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=31.9
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
|+++.| .-+..|.|=.+-+..|+++|+++|++|..+-+.+
T Consensus 3 m~~i~I--~gt~s~~GKT~it~~L~~~L~~~G~~V~~fK~Gp 42 (451)
T PRK01077 3 MPALVI--AAPASGSGKTTVTLGLMRALRRRGLRVQPFKVGP 42 (451)
T ss_pred CcEEEE--EeCCCCCcHHHHHHHHHHHHHhCCCCcceeecCC
Confidence 554333 5577888999999999999999999998886644
No 254
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=41.23 E-value=4.1 Score=47.76 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=25.1
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+++..+. +.+-+++++|+|| ||+|||..||+.
T Consensus 399 ~~~~~~~-~~Gi~~~liRlsvGlE~~~dLi~Dl~~ 432 (437)
T PRK05613 399 SDEAGLA-RAGITQATVRLSVGIEDIDDIIADLEG 432 (437)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 3344444 5677889999999 999999999875
No 255
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=40.21 E-value=6.3 Score=44.94 Aligned_cols=47 Identities=21% Similarity=0.077 Sum_probs=35.5
Q ss_pred CCCcccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
...+.++.|+.+.|++ .+..|. +.+-..+|+|.|| ||.|||..|++.
T Consensus 354 ~~eSL~~~p~~mth~~-----~~e~~~-~~Gi~~~LVRvSVGiEd~~dL~~d~~~ 402 (409)
T KOG0053|consen 354 GNESLAEPPAIMTHAS-----ELEERE-KFGIDPNLVRVSVGIEDIEDLIKDFQQ 402 (409)
T ss_pred ccchhhcchhhhccCC-----CHHHHH-hcCCCCCcEEEEeccCCHHHHHHHHHH
Confidence 4445678888888886 223333 6777999999999 999999999865
No 256
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=40.13 E-value=4.4 Score=46.57 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=30.2
Q ss_pred cCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+..|...++.. +++..+. +.+.++.++|++| ||+|||..||+.
T Consensus 327 ~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 371 (378)
T TIGR01329 327 ISMPCFMSHAS----IPAEVRE-ERGLPEDLVRLSVGIEDVDDLISDLDI 371 (378)
T ss_pred eeCCCcccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33344444443 4444444 5667889999999 999999999875
No 257
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=39.85 E-value=3.9 Score=47.88 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=30.3
Q ss_pred CcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 406 SIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 406 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
..|....|.+ +++..+. ..+.+++|+|++| ||+|||..||+.
T Consensus 380 ~~p~~~~h~~----~~~~~~~-~~Gi~~~liRlsvGlE~~~dli~dl~~ 423 (433)
T PRK08134 380 IHPASTTHFR----MDAAALA-AAGIGEGTIRLSIGLEDADDLIDDLKR 423 (433)
T ss_pred eCCCccCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 3344444444 4444444 6777899999999 999999999876
No 258
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=39.71 E-value=5.3 Score=46.11 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=24.6
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+.+..+. ..+-+..++|+|| ||+|||..||+.
T Consensus 353 ~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 386 (391)
T TIGR01328 353 VPKEERE-AAGITDGMIRLSVGLEDADDLIADLKQ 386 (391)
T ss_pred CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHH
Confidence 3344433 5566789999999 999999999875
No 259
>PRK06460 hypothetical protein; Provisional
Probab=39.64 E-value=4 Score=46.86 Aligned_cols=43 Identities=28% Similarity=0.237 Sum_probs=29.5
Q ss_pred cCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+..|..+.+.. +.+..+. +.+.++.++|+|| ||+|||..||+.
T Consensus 326 ~~~p~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 370 (376)
T PRK06460 326 ISHPATMSHRT----LSLEERK-IVGITDSLLRLSVGIEDVNDLIEDLDR 370 (376)
T ss_pred EeCcccccccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33344444443 4444433 5567889999999 999999999875
No 260
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=38.95 E-value=4.5 Score=47.31 Aligned_cols=25 Identities=28% Similarity=0.400 Sum_probs=22.1
Q ss_pred CCCCCCCcccccc--ccceeccCCCCC
Q 002206 428 CTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 428 ~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
..+.+++++|++| ||+|||..||+.
T Consensus 396 ~~gi~~~liRlsvGlE~~~dli~dl~~ 422 (427)
T PRK05994 396 AAGAGPDVVRLSIGIEDVDDIIADLEQ 422 (427)
T ss_pred hcCCCCCcEEEEeccCCHHHHHHHHHH
Confidence 4667889999999 999999999875
No 261
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism]
Probab=38.70 E-value=2.4e+02 Score=29.83 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=27.3
Q ss_pred EecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 21 ~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
--+..|.|=...+..|+++|+.+|++|.+.-+
T Consensus 8 tGTDT~VGKTv~S~aL~~~l~~~g~~~~~~KP 39 (223)
T COG0132 8 TGTDTGVGKTVVSAALAQALKQQGYSVAGYKP 39 (223)
T ss_pred EeCCCCccHHHHHHHHHHHHHhCCCeeEEECc
Confidence 33677799999999999999999999987644
No 262
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=38.32 E-value=2.4e+02 Score=29.04 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=28.2
Q ss_pred EEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 20 ~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
.++-..|.|=.+-...||..+..+|..|.++|..
T Consensus 5 ~lvGptGvGKTTt~aKLAa~~~~~~~~v~lis~D 38 (196)
T PF00448_consen 5 ALVGPTGVGKTTTIAKLAARLKLKGKKVALISAD 38 (196)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHTT--EEEEEES
T ss_pred EEECCCCCchHhHHHHHHHHHhhccccceeecCC
Confidence 3467788999999999999999999999999875
No 263
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=37.97 E-value=1.1e+02 Score=31.08 Aligned_cols=34 Identities=21% Similarity=0.524 Sum_probs=23.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCc--EE-EEeCC
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHD--VH-VVTGA 53 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHe--Vt-~is~~ 53 (953)
|||+|+.+|.| .....+.++|.+++|+ +. +++..
T Consensus 1 mrI~~~~Sg~~----~~~~~~l~~l~~~~~~~~iv~Vit~~ 37 (181)
T PF00551_consen 1 MRIVFFGSGSG----SFLKALLEALKARGHNVEIVLVITNP 37 (181)
T ss_dssp EEEEEEESSSS----HHHHHHHHHHHTTSSEEEEEEEEESS
T ss_pred CEEEEEEcCCC----HHHHHHHHHHHhCCCCceEEEEeccc
Confidence 57777766554 4466778999999998 33 44443
No 264
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=37.57 E-value=75 Score=32.53 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=42.6
Q ss_pred ecCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCCCccc--ccccCCCceeeeeecccCCcccccccccChHHHHHHHHH
Q 002206 22 VTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFVF--TSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~~~~~--~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (953)
+.....|-+..+.+|+++|.++ |+.|.+-+..+.... .+.+. +.+.+ .+ +..|...
T Consensus 26 iHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~-~~v~~-------~~-----~P~D~~~------- 85 (186)
T PF04413_consen 26 IHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP-DRVDV-------QY-----LPLDFPW------- 85 (186)
T ss_dssp EE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G-GG-SE-------EE--------SSHH-------
T ss_pred EEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC-CCeEE-------EE-----eCccCHH-------
Confidence 4677899999999999999998 788877665432211 11110 00000 00 0111110
Q ss_pred HhhccHHHHHHHHHHHHHcCCCcEEE-ECCCc--hHHHHHHHhCCcEEEE
Q 002206 98 TAVAPRKSILKDEVEWLNSIKADLVV-SDVVP--VACRAAADAGIRSVCV 144 (953)
Q Consensus 98 ~~~~~~~~~~~~~~~~L~~~kpDlVV-~D~~~--~~~~~A~~~giP~I~i 144 (953)
...++|..++||++| .+... ..+..+++.|||++.+
T Consensus 86 -----------~~~rfl~~~~P~~~i~~EtElWPnll~~a~~~~ip~~Lv 124 (186)
T PF04413_consen 86 -----------AVRRFLDHWRPDLLIWVETELWPNLLREAKRRGIPVVLV 124 (186)
T ss_dssp -----------HHHHHHHHH--SEEEEES----HHHHHH-----S-EEEE
T ss_pred -----------HHHHHHHHhCCCEEEEEccccCHHHHHHHhhcCCCEEEE
Confidence 113456778999988 45533 3444567789999988
No 265
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=36.70 E-value=28 Score=43.70 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=46.5
Q ss_pred CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc---EEEEe-CCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 002206 272 YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP---FVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (953)
Q Consensus 272 ~~pdlLa~aDlfIthg---G~~-Tv~Eal~~GvP---~l~iP-~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al 343 (953)
.++.+++.+|+|+..+ |+| ++.|++++|+| .+++. ..+..++ + ..|+.+++.| ++.+.++|
T Consensus 354 ~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~------l---~~~llv~P~d--~~~la~ai 422 (726)
T PRK14501 354 ELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE------L---AEALLVNPND--IEGIAAAI 422 (726)
T ss_pred HHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH------h---CcCeEECCCC--HHHHHHHH
Confidence 4568889999999753 654 78899999775 23322 2222222 2 2378888877 46899999
Q ss_pred HHHHhCC
Q 002206 344 ERAISLK 350 (953)
Q Consensus 344 ~~ll~~~ 350 (953)
.++++++
T Consensus 423 ~~~l~~~ 429 (726)
T PRK14501 423 KRALEMP 429 (726)
T ss_pred HHHHcCC
Confidence 9999765
No 266
>PRK05939 hypothetical protein; Provisional
Probab=36.47 E-value=5.9 Score=45.84 Aligned_cols=43 Identities=26% Similarity=0.135 Sum_probs=30.6
Q ss_pred cCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+.-|....|.+ +++..++ ..+.+++++|++| ||+|||..||+.
T Consensus 348 ~~~p~~~~~~~----~~~~~~~-~~gi~~~lvR~svGlEd~~dLi~dl~~ 392 (397)
T PRK05939 348 VIPVAPTIYYE----MGAERRA-SMGIADSLIRVSVGIEDEADLIADFEQ 392 (397)
T ss_pred eecCccccccc----CCHHHHH-hcCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 33344444444 5554444 5677889999999 999999999865
No 267
>PRK07503 methionine gamma-lyase; Provisional
Probab=35.20 E-value=6.9 Score=45.40 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=25.4
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+++..+. +.+-+++++|++| ||+|||..||+.
T Consensus 359 ~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 392 (403)
T PRK07503 359 YTPEERA-EHGISEGLVRLSVGLEDVADILADLAQ 392 (403)
T ss_pred CCHHHHH-hcCCCCCeEEEEEecCCHHHHHHHHHH
Confidence 4444444 5677889999999 999999999876
No 268
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=35.13 E-value=79 Score=30.38 Aligned_cols=50 Identities=18% Similarity=0.220 Sum_probs=31.1
Q ss_pred HHhhcCEEEe-cCChhHHHHHHH---------cCC-cEEEEeCCCCCchHHH-HHHHHHcCc
Q 002206 276 FMAASDCMLG-KIGYGTVSEALA---------YKL-PFVFVRRDYFNEEPFL-RNMLEFYQG 325 (953)
Q Consensus 276 lLa~aDlfIt-hgG~~Tv~Eal~---------~Gv-P~l~iP~~~~~DQ~~N-A~~l~~~G~ 325 (953)
++..+|+||. -||.||..|... +.+ |++++...+|.+.... .+.+.+.|.
T Consensus 50 m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g~w~~l~~~l~~~~~~g~ 111 (133)
T PF03641_consen 50 MIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDGFWDPLLEFLDRMIEEGF 111 (133)
T ss_dssp HHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGGCCHHHHHHHHHHHHTTS
T ss_pred HHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcchHHHHHHHHHHHHHCCC
Confidence 4457999986 567788776543 345 9999997666655332 234455554
No 269
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=34.98 E-value=5.8 Score=45.68 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=24.7
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+++..+. +.+.+..++|+|| ||+|||..||+.
T Consensus 344 ~~~~~~~-~~gi~~~liRlsvGlE~~~dl~~dl~~ 377 (382)
T TIGR02080 344 MGPEARA-EAGISDTLLRLSVGLEDADDLIADLEQ 377 (382)
T ss_pred CCHHHHH-hcCCCcCeEEEEeccCCHHHHHHHHHH
Confidence 4444433 5666889999999 999999999865
No 270
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=34.77 E-value=46 Score=31.70 Aligned_cols=34 Identities=32% Similarity=0.355 Sum_probs=25.8
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
+|++.++|. ++......++++|.++|++|.++-.
T Consensus 2 ~i~l~vtGs--~~~~~~~~~l~~L~~~g~~v~vv~S 35 (129)
T PF02441_consen 2 RILLGVTGS--IAAYKAPDLLRRLKRAGWEVRVVLS 35 (129)
T ss_dssp EEEEEE-SS--GGGGGHHHHHHHHHTTTSEEEEEES
T ss_pred EEEEEEECH--HHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 555566654 6666699999999999999987644
No 271
>PRK06234 methionine gamma-lyase; Provisional
Probab=34.48 E-value=6.6 Score=45.51 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=30.2
Q ss_pred cCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+..|....+.+ +.+..+. +.+-++.++|+|| ||+|||..||+.
T Consensus 349 ~~~p~~~~~~~----~~~~~~~-~~gi~~~l~R~svGlE~~~dl~~dl~~ 393 (400)
T PRK06234 349 IQHPASMTHSP----YTAEERK-EAGISDGLVRLSVGLEDVDDIIADLKQ 393 (400)
T ss_pred ecCCccCCCCC----CCHHHHH-hcCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 33344555444 4444443 5667889999999 999999999875
No 272
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=34.19 E-value=5.2 Score=46.44 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=25.3
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQGL 453 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 453 (953)
+.+..+. ..+.+++++|++| ||.|||..||+..
T Consensus 353 ~~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~a 387 (405)
T PRK08776 353 MTAEARA-AAGISDGLLRLSVGIESAEDLLIDLRAG 387 (405)
T ss_pred CCHHHHH-hcCCCCCeEEEEeCcCCHHHHHHHHHHH
Confidence 4443333 5566889999999 9999999999763
No 273
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=33.91 E-value=78 Score=32.20 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=32.7
Q ss_pred HHhhcCEEEec-CChhHHHHHHH---------cCCcEEEEeCCCCCchHHH-HHHHHHcCc
Q 002206 276 FMAASDCMLGK-IGYGTVSEALA---------YKLPFVFVRRDYFNEEPFL-RNMLEFYQG 325 (953)
Q Consensus 276 lLa~aDlfIth-gG~~Tv~Eal~---------~GvP~l~iP~~~~~DQ~~N-A~~l~~~G~ 325 (953)
++..+|+||.- ||.||+-|.+. +.+|++++...+|.|.... .+.+.+.|+
T Consensus 93 m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gf 153 (178)
T TIGR00730 93 MAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGF 153 (178)
T ss_pred HHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCC
Confidence 34569999975 67788777633 4999999986566654221 235555554
No 274
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=33.83 E-value=3.1e+02 Score=28.27 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=27.4
Q ss_pred EecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 21 ~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
+.++.|.|-.+.++.++-....+|+.|.++.-
T Consensus 27 v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQF 58 (191)
T PRK05986 27 VHTGNGKGKSTAAFGMALRAVGHGKKVGVVQF 58 (191)
T ss_pred EECCCCCChHHHHHHHHHHHHHCCCeEEEEEE
Confidence 35789999999999999999999999998744
No 275
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=33.65 E-value=7.5 Score=44.61 Aligned_cols=44 Identities=27% Similarity=0.236 Sum_probs=34.4
Q ss_pred ccCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 404 DVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 404 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
.+..|.-+.|.. +.+..|+ +.+-...|+|++| ||.|||+.||+.
T Consensus 345 Li~~pa~~th~~----~~~~~r~-~~Gi~~~LvRlSVGlEd~eDLi~Dl~~ 390 (396)
T COG0626 345 LISHPATMTHAS----IPLEERA-KAGITDGLVRLSVGLEDVEDLIADLEQ 390 (396)
T ss_pred ccccccccCccc----CCHhHHH-hcCCCCCeEEEEecCCCHHHHHHHHHH
Confidence 455555556655 6666666 8888999999999 999999999875
No 276
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=33.30 E-value=1.4e+02 Score=30.82 Aligned_cols=28 Identities=14% Similarity=0.305 Sum_probs=22.9
Q ss_pred cchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 27 FGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 27 ~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
.-++.++..+...+...|-.|.|++..+
T Consensus 39 ~~~L~~A~~~i~~i~~~~g~iLfV~t~~ 66 (193)
T cd01425 39 LEKLRLALNFIANIAAKGGKILFVGTKP 66 (193)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4567777888889998999999998865
No 277
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=33.08 E-value=6.8 Score=45.78 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=21.6
Q ss_pred CCCCCCCcccccc--ccceeccCCCCC
Q 002206 428 CTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 428 ~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+.+-+.+++|++| ||+|||..||+.
T Consensus 394 ~~Gi~~~liRlSvGlEd~eDLi~Dl~~ 420 (432)
T PRK06702 394 LAGVTSDLIRLSVGIEDVSDIIADLEA 420 (432)
T ss_pred hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 4566788999999 999999999875
No 278
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=31.73 E-value=2.8e+02 Score=30.64 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=27.8
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
.-.||.|--+..-.|.++|.++||.|-++.-.|
T Consensus 57 TG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDP 89 (323)
T COG1703 57 TGVPGAGKSTLIEALGRELRERGHRVAVLAVDP 89 (323)
T ss_pred cCCCCCchHHHHHHHHHHHHHCCcEEEEEEECC
Confidence 556778888888899999999999998886554
No 279
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=31.71 E-value=3.5 Score=47.38 Aligned_cols=24 Identities=29% Similarity=0.281 Sum_probs=18.7
Q ss_pred CCCCCCCcccccc--ccceeccCCCC
Q 002206 428 CTPEGDSTVKLST--EDFEILHGDCQ 451 (953)
Q Consensus 428 ~~~~~~~~~~~~~--~~~~~~~~~~~ 451 (953)
+.+.+++++|+|| ||+|||..||+
T Consensus 357 ~~Gi~~~liRlSvGlEd~~dLi~Dl~ 382 (386)
T PF01053_consen 357 EAGISDGLIRLSVGLEDPDDLIADLE 382 (386)
T ss_dssp HTTS-TTEEEEE--SS-HHHHHHHHH
T ss_pred ccCCCCCeeEEEeccCCHHHHHHHHH
Confidence 5677899999999 99999999985
No 280
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=31.49 E-value=66 Score=33.23 Aligned_cols=36 Identities=17% Similarity=0.267 Sum_probs=27.6
Q ss_pred eEEEEEEecCCCcchHHH-HHHHHHHHHHCCCcEEEEeC
Q 002206 15 HLVFAYYVTGHGFGHATR-VVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 15 ~l~il~~v~~~G~GH~~r-~l~La~~L~~rGHeVt~is~ 52 (953)
..+|++.++ |.+.... ...+++.|.++||+|.++-.
T Consensus 5 ~k~IllgVT--Gsiaa~k~a~~lir~L~k~G~~V~vv~T 41 (196)
T PRK08305 5 GKRIGFGLT--GSHCTYDEVMPEIEKLVDEGAEVTPIVS 41 (196)
T ss_pred CCEEEEEEc--CHHHHHHHHHHHHHHHHhCcCEEEEEEC
Confidence 345655665 4577777 69999999999999987744
No 281
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=31.30 E-value=89 Score=37.17 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=49.5
Q ss_pred HHHhhcCEEEecC---ChhH-HHHHHHcCC----cEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 275 DFMAASDCMLGKI---GYGT-VSEALAYKL----PFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 275 dlLa~aDlfIthg---G~~T-v~Eal~~Gv----P~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
.+++.||+++..+ |+|- ..|.++++. |+|+-...+..+| ...++.+++.|. +.+.++|.++
T Consensus 377 alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~---------l~~AllVNP~d~--~~~A~ai~~A 445 (487)
T TIGR02398 377 AWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVE---------LKGALLTNPYDP--VRMDETIYVA 445 (487)
T ss_pred HHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhh---------cCCCEEECCCCH--HHHHHHHHHH
Confidence 5777899999754 8884 569999988 7777664443333 345899999885 6889999999
Q ss_pred HhCC
Q 002206 347 ISLK 350 (953)
Q Consensus 347 l~~~ 350 (953)
|+.+
T Consensus 446 L~m~ 449 (487)
T TIGR02398 446 LAMP 449 (487)
T ss_pred HcCC
Confidence 9876
No 282
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=31.12 E-value=69 Score=35.63 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=32.3
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
+++|+.--.|.|=.+.+.++|-+++++|++|.+++..|.
T Consensus 2 r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa 40 (305)
T PF02374_consen 2 RILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPA 40 (305)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTT
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCC
Confidence 455566666699999999999999999999999998874
No 283
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=30.92 E-value=73 Score=31.73 Aligned_cols=39 Identities=26% Similarity=0.287 Sum_probs=28.4
Q ss_pred HHHh-hcCEEEecC-ChhH---HHHHHHcCCcEEEEeCCCCCch
Q 002206 275 DFMA-ASDCMLGKI-GYGT---VSEALAYKLPFVFVRRDYFNEE 313 (953)
Q Consensus 275 dlLa-~aDlfIthg-G~~T---v~Eal~~GvP~l~iP~~~~~DQ 313 (953)
.+|. .+|+||.-+ |.|| +.|++.+++|+++++..+|.+-
T Consensus 86 ~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g~~~~ 129 (159)
T TIGR00725 86 FILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTGGWTD 129 (159)
T ss_pred HHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCCcchH
Confidence 5554 599999754 5554 4578899999999997665543
No 284
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=30.15 E-value=7.3 Score=44.88 Aligned_cols=43 Identities=21% Similarity=0.194 Sum_probs=29.8
Q ss_pred cCcccccccccccccCccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 405 VSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 405 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+..|....+.+ +++..+. +.+.+++++|++| ||+|||..||+.
T Consensus 336 ~~~~~~~~~~~----~~~~~~~-~~gi~~~liR~svGlE~~~dli~dl~~ 380 (385)
T PRK08574 336 ATYPVKSAASP----IPEEDRK-ALGITEDLVRLSVGLEDVEDLIEDLDQ 380 (385)
T ss_pred eeCCCcCCccc----CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 33344444443 4444444 5677889999999 999999999865
No 285
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=29.32 E-value=7.4 Score=44.74 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=24.5
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+++..+. +.+.+++++|++| ||.|||..||+.
T Consensus 345 ~~~~~~~-~~gi~~~liR~svGlE~~~dl~~dl~~ 378 (380)
T TIGR01325 345 MQPEERA-AAGIGDGLVRLSVGLEDVDDLIADLKR 378 (380)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHh
Confidence 4444433 5566789999999 999999999864
No 286
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=29.18 E-value=5.9e+02 Score=25.38 Aligned_cols=30 Identities=30% Similarity=0.417 Sum_probs=25.7
Q ss_pred ecCCCcchHHHHHHHHHHHHHCCCcEEEEe
Q 002206 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVT 51 (953)
Q Consensus 22 v~~~G~GH~~r~l~La~~L~~rGHeVt~is 51 (953)
.++.|.|-.+.++.++-....+|+.|.|+.
T Consensus 8 y~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQ 37 (159)
T cd00561 8 YTGNGKGKTTAALGLALRALGHGYRVGVVQ 37 (159)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 468899988889999888889999999864
No 287
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=29.11 E-value=52 Score=34.18 Aligned_cols=33 Identities=18% Similarity=0.078 Sum_probs=29.0
Q ss_pred EEecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 20 ~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
++...||.|-.+++..|+++|++++|+|..++.
T Consensus 5 IlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 5 ILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred EEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 356778999999999999999999999987755
No 288
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=27.00 E-value=7e+02 Score=31.16 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=30.3
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
|++..++.+.|=...++.|++.|.++|.+|-++-+
T Consensus 5 l~I~~T~t~~GKT~vslgL~~~L~~~G~~Vg~fKP 39 (684)
T PRK05632 5 IYLAPTGTGVGLTSVSLGLMRALERKGVKVGFFKP 39 (684)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 43466888899999999999999999999999855
No 289
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=26.86 E-value=1.9e+02 Score=33.18 Aligned_cols=82 Identities=17% Similarity=0.240 Sum_probs=56.5
Q ss_pred CCeEECCCCCCHH---HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcE-EEEecCCCChh
Q 002206 262 PNFIKLPKDAYTP---DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGG-VEMIRRDLLTG 337 (953)
Q Consensus 262 ~NV~v~~~~~~~p---dlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g-~~l~~~dl~~~ 337 (953)
.|+++.. .+|.- .++++||++|+ .=+-++.=|++.|+|.+.+-+. +.+...+++.|.- ..++..+++.+
T Consensus 266 ~~i~~~~-d~~~~~~~~~l~~~dl~Vg-~R~HsaI~al~~g~p~i~i~Y~-----~K~~~l~~~~gl~~~~~~i~~~~~~ 338 (385)
T COG2327 266 AEILVSS-DEYAEELGGILAACDLIVG-MRLHSAIMALAFGVPAIAIAYD-----PKVRGLMQDLGLPGFAIDIDPLDAE 338 (385)
T ss_pred cceEeec-chHHHHHHHHhccCceEEe-ehhHHHHHHHhcCCCeEEEeec-----HHHHHHHHHcCCCcccccCCCCchH
Confidence 6777643 23311 46788999997 5556788899999999999732 5666777777763 44566677777
Q ss_pred hHHHHHHHHHhCC
Q 002206 338 HWKPYLERAISLK 350 (953)
Q Consensus 338 ~l~~al~~ll~~~ 350 (953)
.+...+.+.+.+.
T Consensus 339 ~l~~~~~e~~~~~ 351 (385)
T COG2327 339 ILSAVVLERLTKL 351 (385)
T ss_pred HHHHHHHHHHhcc
Confidence 7777776665443
No 290
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=26.41 E-value=1.2e+02 Score=32.39 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=33.7
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
|+.+.| ...-.|.|=.+-+.+||..|++.|++|..|-..|
T Consensus 1 M~~iai--~s~kGGvG~TTltAnLA~aL~~~G~~VlaID~dp 40 (243)
T PF06564_consen 1 MKVIAI--VSPKGGVGKTTLTANLAWALARLGESVLAIDLDP 40 (243)
T ss_pred CcEEEE--ecCCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCc
Confidence 555555 5677889999999999999999999999996665
No 291
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
Probab=26.28 E-value=1.2e+02 Score=29.16 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.1
Q ss_pred EEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 19 AYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 19 l~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
++++++.|.|=..-+..+++.|.++|.+|.++-+..
T Consensus 2 ~~~~~~~~~Gkt~~~~~l~~~l~~~~~~v~~~kp~~ 37 (134)
T cd03109 2 MGFGTGTDIGKTVATAILARALKEKGYRVAPLKPVQ 37 (134)
T ss_pred EEEeCCCCcCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 567889999999999999999999999999986654
No 292
>CHL00067 rps2 ribosomal protein S2
Probab=26.01 E-value=3.1e+02 Score=29.11 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=23.7
Q ss_pred CCcEEEE-CC--CchHHHHHHHhCCcEEEEecCC
Q 002206 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTNFS 148 (953)
Q Consensus 118 kpDlVV~-D~--~~~~~~~A~~~giP~I~is~~~ 148 (953)
.||+||. |. ...+..=|.++|||+|++.+..
T Consensus 161 ~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn 194 (230)
T CHL00067 161 LPDIVIIIDQQEEYTALRECRKLGIPTISILDTN 194 (230)
T ss_pred CCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCC
Confidence 5999885 44 4567777899999999995533
No 293
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=25.49 E-value=1.3e+02 Score=33.19 Aligned_cols=42 Identities=21% Similarity=0.492 Sum_probs=33.3
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
..|+.+.| + .-.|.|=.+-+..||-+|++.|.+|.++...++
T Consensus 2 ~~~~~iai--~-~KGGvGKTt~~~nLa~~la~~g~kVLliD~D~q 43 (295)
T PRK13234 2 SKLRQIAF--Y-GKGGIGKSTTSQNTLAALVEMGQKILIVGCDPK 43 (295)
T ss_pred CcceEEEE--E-CCCCccHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 34654444 4 677799999999999999999999999966654
No 294
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=25.15 E-value=1.3e+02 Score=28.73 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=25.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcE-EEE
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDV-HVV 50 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeV-t~i 50 (953)
+.|++-.+.+|......++.+|+++.+.||+| .++
T Consensus 3 ~~iv~~~~Py~~~~~~~al~~A~aa~~~gh~v~~vF 38 (128)
T PRK00207 3 YAIAVTGPAYGTQQASSAYQFAQALLAEGHELVSVF 38 (128)
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHhCCCCeeEEE
Confidence 44444445555667788899999999999995 443
No 295
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=24.45 E-value=69 Score=32.82 Aligned_cols=38 Identities=16% Similarity=0.307 Sum_probs=25.3
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
++..++++ ++.+..|. +..+||+++..+||+|+++.+.
T Consensus 15 E~iD~VR~---ItN~SSG~--~G~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 15 EPIDPVRF---ITNRSSGK--MGAALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp EESSSSEE---EEES--SH--HHHHHHHHHHHTT-EEEEEE-T
T ss_pred ccCCCceE---ecCCCcCH--HHHHHHHHHHHCCCEEEEEecC
Confidence 33445666 56666664 4678999999999999999875
No 296
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=24.16 E-value=2.5e+02 Score=31.11 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=29.2
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHC--CCcEEEEeCC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGA 53 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~ 53 (953)
+|++. ...+.|-+..+.++.+.|++. +.+|++++..
T Consensus 2 ~ILii-~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 2 RVLIV-KTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred eEEEE-eccchHHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 45443 455799999999999999997 7899999764
No 297
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=23.68 E-value=1.1e+02 Score=28.36 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=25.6
Q ss_pred HHHhhcCEEEe---c--CChhHHHH---HHHcCCcEEEEeCC
Q 002206 275 DFMAASDCMLG---K--IGYGTVSE---ALAYKLPFVFVRRD 308 (953)
Q Consensus 275 dlLa~aDlfIt---h--gG~~Tv~E---al~~GvP~l~iP~~ 308 (953)
+.|..||++|. . .+.||.+| |.+.|+|++++-..
T Consensus 57 ~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d 98 (113)
T PF05014_consen 57 EGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTED 98 (113)
T ss_dssp HHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECC
T ss_pred HHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcC
Confidence 56678999994 2 57899999 56789999999743
No 298
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=23.67 E-value=1.2e+02 Score=29.28 Aligned_cols=40 Identities=20% Similarity=-0.001 Sum_probs=33.7
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
|++.++++. +.+|-+|-.-..-++..|+.+|.+|+++...
T Consensus 1 ~~~~~vl~~-~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~ 40 (137)
T PRK02261 1 MKKKTVVLG-VIGADCHAVGNKILDRALTEAGFEVINLGVM 40 (137)
T ss_pred CCCCEEEEE-eCCCChhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 677777554 6778899999999999999999999998664
No 299
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.46 E-value=1.6e+02 Score=32.01 Aligned_cols=53 Identities=21% Similarity=0.105 Sum_probs=39.1
Q ss_pred hcCEEEecCChhHHHHHHH------cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 279 ASDCMLGKIGYGTVSEALA------YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 279 ~aDlfIthgG~~Tv~Eal~------~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
.+|++|+-||-||+..++. .++|++.+..+ ..|... ++.++++.+.|+++++.
T Consensus 35 ~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G---------------~lGFL~---~~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 35 NPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG---------------HLGFYT---DWRPFEVDKLVIALAKD 93 (265)
T ss_pred CCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC---------------Cceecc---cCCHHHHHHHHHHHHcC
Confidence 4799999999999999986 58999999832 123332 33456778888888754
No 300
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=23.29 E-value=12 Score=42.87 Aligned_cols=32 Identities=25% Similarity=0.187 Sum_probs=24.6
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+++..|. ..+.+.+|+|++| ||+|||..||+.
T Consensus 327 ~~~~~r~-~~Gi~~~liRlsvGlE~~~dli~dl~~ 360 (364)
T PRK07269 327 IPAEVRH-SYGLTDDLLRLSIGIEDARDLIADLKQ 360 (364)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 3343443 5666889999999 999999999864
No 301
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=23.25 E-value=12 Score=43.47 Aligned_cols=25 Identities=36% Similarity=0.400 Sum_probs=21.7
Q ss_pred CCCCCCCcccccc--ccceeccCCCCC
Q 002206 428 CTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 428 ~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+.+.++.++|+|| ||+|||..||+.
T Consensus 374 ~~gi~~~lvR~svGlE~~~dli~dl~~ 400 (403)
T PRK07810 374 AIGLGDGVVRLSVGLEDTDDLIADLDR 400 (403)
T ss_pred hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 5566788999999 999999999864
No 302
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.91 E-value=1.9e+02 Score=32.01 Aligned_cols=57 Identities=12% Similarity=0.022 Sum_probs=41.1
Q ss_pred HHHhhcCEEEecCChhHHHHHHH----cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 275 DFMAASDCMLGKIGYGTVSEALA----YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 275 dlLa~aDlfIthgG~~Tv~Eal~----~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
++...+|++|+=||-||+..++. .++|++.+..+. .|... ++.++++.++|+++++.
T Consensus 64 ~~~~~~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G~---------------lGFL~---~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 64 ELGQYCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQGH---------------LGFLT---QIPREYMTDKLLPVLEG 124 (296)
T ss_pred hcCcCCCEEEEECCcHHHHHHHHHhcccCCCEEEEecCC---------------CeEee---ccCHHHHHHHHHHHHcC
Confidence 33346999999999999998875 478999998321 34333 24456788888888754
No 303
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=22.38 E-value=1.8e+02 Score=25.06 Aligned_cols=31 Identities=26% Similarity=0.351 Sum_probs=25.1
Q ss_pred EEecCCCcchHHHHHHHHHHHHHCCCcEEEEe
Q 002206 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVT 51 (953)
Q Consensus 20 ~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is 51 (953)
+++.|.| .|..+...+|+.|.++|..|...-
T Consensus 20 ~i~HG~~-eh~~ry~~~a~~L~~~G~~V~~~D 50 (79)
T PF12146_consen 20 VIVHGFG-EHSGRYAHLAEFLAEQGYAVFAYD 50 (79)
T ss_pred EEeCCcH-HHHHHHHHHHHHHHhCCCEEEEEC
Confidence 3455554 699999999999999999988763
No 304
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=22.15 E-value=1.1e+02 Score=31.70 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=24.3
Q ss_pred CCCcEEEE-CC--CchHHHHHHHhCCcEEEEecC
Q 002206 117 IKADLVVS-DV--VPVACRAAADAGIRSVCVTNF 147 (953)
Q Consensus 117 ~kpDlVV~-D~--~~~~~~~A~~~giP~I~is~~ 147 (953)
..||+||. |. ..-+..=|.++|||+|++.+.
T Consensus 107 ~~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DT 140 (196)
T TIGR01012 107 REPEVVVVTDPRADHQALKEASEVGIPIVALCDT 140 (196)
T ss_pred CCCCEEEEECCccccHHHHHHHHcCCCEEEEeeC
Confidence 36998884 54 667788899999999999543
No 305
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase. This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation.
Probab=22.06 E-value=5.5e+02 Score=30.26 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=29.4
Q ss_pred EEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 20 ~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
+.-+..|.|=.+.+..|+++|+++|++|..+-+.+
T Consensus 4 I~gT~t~vGKT~vt~~L~~~L~~~G~~V~~fK~g~ 38 (449)
T TIGR00379 4 IAGTSSGVGKTTISTGIMKALSRRKLRVQPFKVGP 38 (449)
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHCCCceeEEccCC
Confidence 34577778999999999999999999999886543
No 306
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=21.79 E-value=1.5e+02 Score=31.97 Aligned_cols=38 Identities=26% Similarity=0.393 Sum_probs=31.8
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
+|.++ .-.|.|-.+-+..||.+|+++|+.|.++-..|+
T Consensus 2 ~i~v~-gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq 39 (267)
T cd02032 2 VLAVY-GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPK 39 (267)
T ss_pred EEEEe-cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 45555 466799999999999999999999999976654
No 307
>PRK10037 cell division protein; Provisional
Probab=21.69 E-value=1.6e+02 Score=31.41 Aligned_cols=41 Identities=20% Similarity=0.330 Sum_probs=34.8
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
|+ .|.++..-.|.|=.+-+..||.+|+++|++|.++-..++
T Consensus 1 ~~--~iav~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~D~q 41 (250)
T PRK10037 1 MA--ILGLQGVRGGVGTTSITAALAWSLQMLGENVLVIDACPD 41 (250)
T ss_pred Cc--EEEEecCCCCccHHHHHHHHHHHHHhcCCcEEEEeCChh
Confidence 55 466677888899999999999999999999999966654
No 308
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=21.27 E-value=1.9e+02 Score=30.64 Aligned_cols=41 Identities=20% Similarity=0.379 Sum_probs=35.0
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcc
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV 57 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~ 57 (953)
+|.|+.+-.|-|-.+-++.||-+|+++|-.|+++-..|...
T Consensus 3 vItf~s~KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~p 43 (231)
T PF07015_consen 3 VITFASSKGGAGKTTAAMALASELAARGARVALIDADPNQP 43 (231)
T ss_pred eEEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence 34557888899999999999999999999999998876433
No 309
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=20.99 E-value=1.1e+02 Score=31.70 Aligned_cols=31 Identities=32% Similarity=0.431 Sum_probs=24.3
Q ss_pred CCCcEEEE-CC--CchHHHHHHHhCCcEEEEecC
Q 002206 117 IKADLVVS-DV--VPVACRAAADAGIRSVCVTNF 147 (953)
Q Consensus 117 ~kpDlVV~-D~--~~~~~~~A~~~giP~I~is~~ 147 (953)
..||+||. |. ...+..=|.+++||+|++.+.
T Consensus 113 ~~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDT 146 (204)
T PRK04020 113 IEPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDT 146 (204)
T ss_pred CCCCEEEEECCcccHHHHHHHHHhCCCEEEEEeC
Confidence 37999884 54 566777899999999999543
No 310
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=20.85 E-value=98 Score=32.45 Aligned_cols=124 Identities=16% Similarity=0.099 Sum_probs=68.5
Q ss_pred CCCCce------EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccc-c--ccCCCceeeeeecccCCccc
Q 002206 10 SASSKH------LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFT-S--EIQSPRLFIRKVLLDCGAVQ 80 (953)
Q Consensus 10 ~~~m~~------l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~-~--~i~~~~~~~~~~~~~~g~~~ 80 (953)
++.|++ .-|.++-..--..|+.+++.++..++.+|=.+.|++..+.+... + ..+...+.+. ..|-.|++.
T Consensus 68 n~~m~pyiyG~R~Gi~IIdLdqT~~~Lr~A~~fVa~vA~r~GiILFv~tn~~~~~~ve~aA~r~~gy~~~-~~w~~G~lT 146 (251)
T KOG0832|consen 68 NPRMKPYIYGKRLGIHIIDLDQTASYLRRALNFVAHVAHRGGIILFVGTNNGFKDLVERAARRAGGYSHN-RKWLGGLLT 146 (251)
T ss_pred CcccchhhcccccCcEEEecHHHHHHHHHHHHHHHHHHhcCCeEEEEecCcchHHHHHHHHHHhcCceee-eeeccceee
Confidence 666764 33333445555789999999999999999999999876533211 0 0011122111 123334331
Q ss_pred ccccccChHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEE-CC--CchHHHHHHHhCCcEEEEe
Q 002206 81 ADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVS-DV--VPVACRAAADAGIRSVCVT 145 (953)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~-D~--~~~~~~~A~~~giP~I~is 145 (953)
... .. ...+ . ....-..+..-++....||+||+ +. ...++.=|.+.+||+|.+-
T Consensus 147 N~~------~l---~g~~-~-~~~~~~pd~~~f~~t~~~D~vvvln~~e~~sAilEA~K~~IPTIgIV 203 (251)
T KOG0832|consen 147 NAR------EL---FGAL-V-RKFLSLPDALCFLPTLTPDLVVVLNPEENHSAILEAAKMAIPTIGIV 203 (251)
T ss_pred cch------hh---cccc-c-ccccCCCcceeecccCCcceeEecCcccccHHHHHHHHhCCCeEEEe
Confidence 100 00 0000 0 00000122233445678899996 33 5677888999999999983
No 311
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=20.32 E-value=2.7e+02 Score=33.43 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=53.9
Q ss_pred CCCCeEECCCCC--CHHHHHhhcCEEEecCCh---hHHHHHHHcCCcEEEEeCC---------CCCchHHHHH------H
Q 002206 260 LPPNFIKLPKDA--YTPDFMAASDCMLGKIGY---GTVSEALAYKLPFVFVRRD---------YFNEEPFLRN------M 319 (953)
Q Consensus 260 lp~NV~v~~~~~--~~pdlLa~aDlfIthgG~---~Tv~Eal~~GvP~l~iP~~---------~~~DQ~~NA~------~ 319 (953)
+|.-|.-++... .+-.+|..+++||+-|.- -+-.||+++|+|.|---.. .|.+.+...+ +
T Consensus 320 ~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY 399 (559)
T PF15024_consen 320 VPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPY 399 (559)
T ss_pred cchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChH
Confidence 666555555432 234888999999986632 3899999999998873211 0111111111 2
Q ss_pred HH-HcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 320 LE-FYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 320 l~-~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
++ .-|---+.+-+.-...++..||+++++++
T Consensus 400 ~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 400 AEEFIGEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred HHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 33 23433333333333568899999999876
No 312
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=20.20 E-value=14 Score=42.14 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=24.4
Q ss_pred CccCCCCCCCCCCCCcccccc--ccceeccCCCCC
Q 002206 420 LSASRSPPCTPEGDSTVKLST--EDFEILHGDCQG 452 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 452 (953)
+++..|. ..+.++.++|++| ||+|||..||+.
T Consensus 327 ~~~~~r~-~~gi~~~~~R~svGlE~~~dl~~dl~~ 360 (366)
T PRK08247 327 IPEEIRI-ANGVCNRLLRFSVGIENVEDLIADLKQ 360 (366)
T ss_pred CCHHHHH-hcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 3343333 4566889999999 999999999875
No 313
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=20.18 E-value=1.8e+02 Score=31.17 Aligned_cols=40 Identities=23% Similarity=0.433 Sum_probs=33.2
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
|+++.| + .-.|.|=.+-+..||.+|+++|++|.++-..++
T Consensus 1 m~~iav--~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq 40 (270)
T cd02040 1 MRQIAI--Y-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPK 40 (270)
T ss_pred CcEEEE--E-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCC
Confidence 555555 4 577799999999999999999999999977664
No 314
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=20.17 E-value=2.3e+02 Score=29.11 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=30.4
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
|.+..+..|.|=.+-+..||.+|+++|++|.++-..
T Consensus 20 I~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 20 LLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 444667778999999999999999999999998654
No 315
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=20.07 E-value=2e+02 Score=27.81 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=29.8
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
.|.++.+.+|.|=..-+..+|..|++.|++|.++...
T Consensus 2 ~i~v~s~~~g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 2 VIAVWSPKGGVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 3556778889999999999999999999999888554
Done!