Query 002206
Match_columns 953
No_of_seqs 500 out of 3224
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 16:54:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002206.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002206hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v2u_C Protein GAL3; rossmann 100.0 1.7E-60 5.7E-65 553.0 28.5 401 479-947 22-482 (520)
2 2a2c_A N-acetylgalactosamine k 100.0 8.4E-50 2.9E-54 466.9 34.1 382 480-941 39-434 (478)
3 1pie_A Galactokinase; galactos 100.0 2.7E-48 9.2E-53 448.5 30.4 347 480-941 31-380 (419)
4 1wuu_A Galactokinase; galactos 100.0 7.6E-47 2.6E-51 433.8 27.5 344 479-941 19-365 (399)
5 3k85_A D-glycero-D-manno-hepto 100.0 6.4E-46 2.2E-50 418.4 16.3 293 497-941 3-309 (357)
6 2cz9_A Probable galactokinase; 100.0 5.5E-44 1.9E-48 403.6 25.2 313 498-941 2-315 (350)
7 3k17_A LIN0012 protein; protei 100.0 1.3E-41 4.5E-46 383.8 24.9 287 496-942 5-329 (365)
8 1kvk_A MK, mevalonate kinase; 100.0 1.8E-41 6.1E-46 388.8 19.4 312 496-942 4-347 (395)
9 3gon_A Phosphomevalonate kinas 100.0 1.8E-40 6.2E-45 372.3 23.2 278 497-941 1-305 (335)
10 2pg9_A Phosphomevalonate kinas 100.0 1.8E-39 6.1E-44 363.2 24.3 276 497-941 3-307 (337)
11 4hac_A Mevalonate kinase; GHMP 100.0 8.7E-36 3E-40 331.3 28.8 281 494-948 18-299 (321)
12 2x7i_A Mevalonate kinase; tran 100.0 5.9E-36 2E-40 331.7 22.4 276 497-941 6-282 (308)
13 2hfs_A Mevalonate kinase, puta 100.0 1.1E-34 3.9E-39 324.8 27.5 287 495-942 11-299 (332)
14 1kkh_A Mevalonate kinase; mixe 100.0 2.2E-34 7.5E-39 320.4 23.1 282 496-942 4-294 (317)
15 2oi2_A Mevalonate kinase; enzy 100.0 5.6E-33 1.9E-37 305.4 23.8 263 497-941 5-268 (292)
16 1h72_C HK, homoserine kinase; 100.0 8.5E-28 2.9E-32 264.6 21.6 260 498-939 3-265 (296)
17 4amg_A Snogd; transferase, pol 100.0 1.9E-27 6.6E-32 272.3 24.5 338 14-370 21-398 (400)
18 3s2u_A UDP-N-acetylglucosamine 99.9 3E-26 1E-30 259.8 26.9 325 13-373 1-357 (365)
19 2iya_A OLEI, oleandomycin glyc 99.9 1.9E-25 6.6E-30 258.2 30.3 346 11-371 8-420 (424)
20 3rsc_A CALG2; TDP, enediyne, s 99.9 3E-25 1E-29 255.7 27.6 345 10-371 17-412 (415)
21 1iir_A Glycosyltransferase GTF 99.9 9.8E-25 3.4E-29 251.7 29.7 343 17-387 2-407 (415)
22 3ia7_A CALG4; glycosysltransfe 99.9 1.3E-24 4.4E-29 248.7 28.4 343 16-372 5-398 (402)
23 3h4t_A Glycosyltransferase GTF 99.9 8.6E-25 2.9E-29 251.4 26.8 342 17-379 2-389 (404)
24 2vch_A Hydroquinone glucosyltr 99.9 5.5E-24 1.9E-28 249.6 32.5 320 16-348 7-428 (480)
25 1rrv_A Glycosyltransferase GTF 99.9 2.8E-24 9.6E-29 248.0 28.6 336 16-371 1-400 (416)
26 3hbf_A Flavonoid 3-O-glucosylt 99.9 2.6E-24 9E-29 248.6 27.2 344 14-372 12-432 (454)
27 2yjn_A ERYCIII, glycosyltransf 99.9 3.5E-24 1.2E-28 249.1 24.2 346 16-373 21-436 (441)
28 2c1x_A UDP-glucose flavonoid 3 99.9 4.6E-24 1.6E-28 248.6 24.3 342 15-371 7-429 (456)
29 4fzr_A SSFS6; structural genom 99.9 6.7E-24 2.3E-28 243.1 25.0 318 14-351 14-370 (398)
30 2pq6_A UDP-glucuronosyl/UDP-gl 99.9 9.2E-24 3.2E-28 248.2 26.5 346 13-371 6-456 (482)
31 3oti_A CALG3; calicheamicin, T 99.9 2.3E-23 7.7E-28 238.8 21.5 331 16-371 21-396 (398)
32 2iyf_A OLED, oleandomycin glyc 99.9 1.2E-22 4E-27 235.2 26.5 344 13-371 5-398 (430)
33 2acv_A Triterpene UDP-glucosyl 99.9 1.9E-22 6.4E-27 235.6 28.0 337 14-371 8-440 (463)
34 2p6p_A Glycosyl transferase; X 99.9 1.3E-22 4.4E-27 231.2 24.6 335 17-372 2-379 (384)
35 3tsa_A SPNG, NDP-rhamnosyltran 99.9 4.6E-23 1.6E-27 235.4 20.1 340 16-372 2-388 (391)
36 2v8p_A 4-diphosphocytidyl-2-C- 99.9 3.9E-23 1.3E-27 224.2 17.9 167 496-738 3-174 (271)
37 3otg_A CALG1; calicheamicin, T 99.9 3.9E-22 1.3E-26 229.1 21.8 343 15-372 20-408 (412)
38 2gs8_A Mevalonate pyrophosphat 99.9 5E-22 1.7E-26 220.5 14.8 274 496-941 7-290 (317)
39 2ww4_A 4-diphosphocytidyl-2C-m 99.8 6.7E-21 2.3E-25 207.5 16.9 169 498-739 3-182 (283)
40 3pyf_A 4-diphosphocytidyl-2-C- 99.8 2.2E-20 7.4E-25 205.5 20.6 258 497-941 5-267 (306)
41 3qt5_A Mevalonate diphosphate 99.8 2E-20 6.9E-25 207.9 19.5 275 498-941 10-299 (332)
42 1uek_A 4-(cytidine 5'-diphosph 99.8 9.9E-21 3.4E-25 205.7 15.1 159 498-738 2-165 (275)
43 3hul_A HSK, HK, homoserine kin 99.8 1.8E-18 6.1E-23 189.5 22.8 251 498-940 3-256 (298)
44 1f0k_A MURG, UDP-N-acetylgluco 99.8 3.7E-18 1.3E-22 192.4 24.7 319 16-373 7-356 (364)
45 3hbm_A UDP-sugar hydrolase; PS 99.7 8.9E-17 3E-21 173.8 24.0 240 23-331 11-274 (282)
46 2o6l_A UDP-glucuronosyltransfe 99.7 1.2E-16 4.2E-21 160.2 15.5 141 207-350 5-155 (170)
47 1fi4_A Mevalonate 5-diphosphat 99.7 8.3E-16 2.8E-20 175.9 22.9 83 610-702 92-184 (416)
48 2jzc_A UDP-N-acetylglucosamine 99.5 1.9E-13 6.5E-18 141.9 12.6 149 217-370 22-221 (224)
49 3lto_A Mevalonate diphosphate 99.4 5.1E-12 1.7E-16 138.3 19.6 75 616-702 79-158 (323)
50 2hke_A Diphosphomevalonate dec 99.3 6.2E-11 2.1E-15 134.1 21.4 79 611-702 76-155 (380)
51 3c48_A Predicted glycosyltrans 99.2 5.8E-10 2E-14 128.4 21.1 131 212-351 232-393 (438)
52 2jjm_A Glycosyl transferase, g 99.2 4.4E-09 1.5E-13 119.4 27.4 132 210-350 198-351 (394)
53 3fro_A GLGA glycogen synthase; 99.2 1.9E-09 6.3E-14 123.7 23.8 132 210-352 239-399 (439)
54 3okp_A GDP-mannose-dependent a 99.2 8.7E-10 3E-14 124.6 20.1 295 13-350 2-345 (394)
55 2iw1_A Lipopolysaccharide core 99.1 4.1E-09 1.4E-13 118.3 23.8 132 210-350 183-338 (374)
56 3ot5_A UDP-N-acetylglucosamine 99.1 1.6E-09 5.4E-14 123.9 19.7 315 11-372 23-393 (403)
57 3dzc_A UDP-N-acetylglucosamine 99.1 1E-09 3.5E-14 125.2 18.1 148 211-368 217-395 (396)
58 3f0n_A Mevalonate pyrophosphat 99.1 3.8E-10 1.3E-14 125.9 12.8 60 630-702 122-181 (414)
59 2x6q_A Trehalose-synthase TRET 99.1 1.8E-09 6.2E-14 123.5 18.6 300 11-350 36-380 (416)
60 1vgv_A UDP-N-acetylglucosamine 99.0 6.7E-09 2.3E-13 117.3 19.4 150 212-371 193-373 (384)
61 2gek_A Phosphatidylinositol ma 98.9 2E-08 6.8E-13 114.0 19.1 292 15-350 20-350 (406)
62 2r60_A Glycosyl transferase, g 98.9 5.7E-08 2E-12 114.0 23.1 131 211-350 245-425 (499)
63 1v4v_A UDP-N-acetylglucosamine 98.9 2.6E-08 8.8E-13 112.2 18.9 141 222-372 197-366 (376)
64 2iuy_A Avigt4, glycosyltransfe 98.9 2E-09 6.9E-14 119.7 8.5 262 13-348 1-307 (342)
65 3beo_A UDP-N-acetylglucosamine 98.8 6.3E-07 2.2E-11 100.5 25.9 146 212-370 197-372 (375)
66 1rzu_A Glycogen synthase 1; gl 98.7 2E-07 6.9E-12 108.8 19.3 130 210-347 277-438 (485)
67 4hwg_A UDP-N-acetylglucosamine 98.6 6.9E-07 2.4E-11 101.1 18.2 151 210-371 191-374 (385)
68 2qzs_A Glycogen synthase; glyc 98.5 6.6E-07 2.3E-11 104.4 15.7 130 210-347 277-439 (485)
69 3s28_A Sucrose synthase 1; gly 98.5 3.7E-06 1.3E-10 103.3 19.8 120 224-351 572-736 (816)
70 3oy2_A Glycosyltransferase B73 98.4 2E-06 6.8E-11 97.9 15.8 131 212-351 171-357 (413)
71 2hy7_A Glucuronosyltransferase 98.4 2.8E-05 9.6E-10 88.6 24.4 134 223-370 221-373 (406)
72 2vsy_A XCC0866; transferase, g 98.3 3.1E-06 1E-10 100.9 12.5 132 213-350 367-523 (568)
73 2x0d_A WSAF; GT4 family, trans 98.2 2.1E-06 7.2E-11 98.2 9.5 96 247-351 276-381 (413)
74 2xci_A KDO-transferase, 3-deox 98.1 0.00027 9.3E-09 79.5 22.6 85 262-353 260-349 (374)
75 2f9f_A First mannosyl transfer 97.9 5E-05 1.7E-09 75.6 11.4 119 222-351 22-164 (177)
76 3vue_A GBSS-I, granule-bound s 97.8 0.0014 4.8E-08 77.3 22.9 132 211-348 313-476 (536)
77 2bfw_A GLGA glycogen synthase; 97.7 0.00022 7.5E-09 72.0 12.9 129 210-350 24-182 (200)
78 3tov_A Glycosyl transferase fa 96.8 0.05 1.7E-06 60.2 20.0 249 15-306 8-287 (349)
79 3qhp_A Type 1 capsular polysac 96.7 0.0027 9.4E-08 61.7 7.2 116 224-350 2-141 (166)
80 1psw_A ADP-heptose LPS heptosy 96.6 0.032 1.1E-06 61.4 16.7 254 17-306 2-287 (348)
81 3rhz_A GTF3, nucleotide sugar 95.5 0.036 1.2E-06 61.1 9.6 111 223-346 177-301 (339)
82 3q3e_A HMW1C-like glycosyltran 85.9 0.78 2.7E-05 54.0 6.1 86 260-350 497-589 (631)
83 4gyw_A UDP-N-acetylglucosamine 84.2 1.5 5.2E-05 53.2 7.8 125 214-347 514-663 (723)
84 1uqt_A Alpha, alpha-trehalose- 83.1 1.1 3.8E-05 51.6 5.7 77 263-350 332-420 (482)
85 3nb0_A Glycogen [starch] synth 81.1 1.5 5E-05 52.2 5.7 69 273-347 512-592 (725)
86 2wqk_A 5'-nucleotidase SURE; S 73.0 12 0.00041 38.9 9.3 36 13-53 1-36 (251)
87 3t5t_A Putative glycosyltransf 72.6 4.1 0.00014 46.8 6.2 78 263-350 353-439 (496)
88 3l7i_A Teichoic acid biosynthe 70.9 14 0.00048 44.6 10.9 152 211-372 526-719 (729)
89 3ug7_A Arsenical pump-driving 69.0 25 0.00086 38.2 11.4 43 11-55 23-65 (349)
90 2gt1_A Lipopolysaccharide hept 67.0 11 0.00039 40.2 8.1 120 222-349 177-322 (326)
91 3zq6_A Putative arsenical pump 60.6 40 0.0014 36.1 10.9 43 11-55 11-53 (324)
92 3iqw_A Tail-anchored protein t 52.3 35 0.0012 36.8 8.6 39 17-55 17-55 (334)
93 3mc3_A DSRE/DSRF-like family p 52.3 14 0.00049 34.1 4.8 43 10-52 12-54 (134)
94 2phj_A 5'-nucleotidase SURE; S 50.7 64 0.0022 33.2 9.7 35 16-53 2-36 (251)
95 4gi5_A Quinone reductase; prot 49.5 16 0.00056 38.5 5.2 44 10-53 17-62 (280)
96 3igf_A ALL4481 protein; two-do 49.3 60 0.002 35.7 9.9 37 18-55 4-40 (374)
97 1jx7_A Hypothetical protein YC 48.2 20 0.00067 31.8 4.9 38 13-50 1-40 (117)
98 3sbx_A Putative uncharacterize 46.2 32 0.0011 33.9 6.4 50 276-325 105-165 (189)
99 2vqe_B 30S ribosomal protein S 44.7 36 0.0012 35.2 6.7 30 118-147 158-190 (256)
100 1ydh_A AT5G11950; structural g 43.9 26 0.00087 35.4 5.4 55 271-325 93-162 (216)
101 2hy5_B Intracellular sulfur ox 43.2 25 0.00084 32.7 4.8 39 12-50 4-42 (136)
102 2d1p_B TUSC, hypothetical UPF0 40.1 35 0.0012 30.7 5.2 38 13-50 1-38 (119)
103 2hy5_A Putative sulfurtransfer 36.3 43 0.0015 30.5 5.3 33 18-50 3-38 (130)
104 3qua_A Putative uncharacterize 35.9 42 0.0014 33.3 5.4 38 276-313 114-161 (199)
105 4ds3_A Phosphoribosylglycinami 32.3 97 0.0033 30.9 7.5 39 11-53 3-44 (209)
106 2lpm_A Two-component response 30.5 25 0.00086 32.0 2.6 41 108-148 43-89 (123)
107 3of5_A Dethiobiotin synthetase 30.0 61 0.0021 32.7 5.7 40 11-52 2-41 (228)
108 3qjg_A Epidermin biosynthesis 28.0 36 0.0012 33.1 3.3 36 16-53 6-41 (175)
109 3lqk_A Dipicolinate synthase s 26.9 41 0.0014 33.5 3.5 38 13-52 5-43 (201)
110 2ywr_A Phosphoribosylglycinami 26.1 2E+02 0.0068 28.7 8.6 34 16-53 2-38 (216)
111 1id1_A Putative potassium chan 26.0 57 0.002 30.3 4.4 26 26-53 10-35 (153)
112 3auf_A Glycinamide ribonucleot 25.9 2.7E+02 0.0094 28.0 9.7 34 16-53 23-59 (229)
113 3to5_A CHEY homolog; alpha(5)b 25.1 77 0.0026 29.0 4.9 39 111-149 50-98 (134)
114 4dzz_A Plasmid partitioning pr 24.8 89 0.003 30.2 5.7 38 18-55 4-41 (206)
115 3gl9_A Response regulator; bet 24.6 1E+02 0.0035 26.8 5.6 38 111-148 39-86 (122)
116 2khz_A C-MYC-responsive protei 24.5 84 0.0029 30.0 5.3 69 275-348 73-150 (165)
117 2a33_A Hypothetical protein; s 23.8 90 0.0031 31.3 5.5 43 271-313 97-153 (215)
118 3f6r_A Flavodoxin; FMN binding 22.9 1E+02 0.0035 28.2 5.5 38 13-53 1-39 (148)
119 1g3q_A MIND ATPase, cell divis 22.7 1.2E+02 0.0041 30.1 6.4 38 17-54 4-41 (237)
120 3mcu_A Dipicolinate synthase, 22.5 52 0.0018 32.9 3.4 37 14-52 4-41 (207)
121 2i2c_A Probable inorganic poly 22.2 49 0.0017 34.5 3.3 53 279-349 35-93 (272)
122 4fyk_A Deoxyribonucleoside 5'- 22.0 84 0.0029 29.7 4.5 69 275-348 64-141 (152)
123 3zqu_A Probable aromatic acid 21.3 1.2E+02 0.0039 30.4 5.6 35 16-52 5-39 (209)
124 1yt5_A Inorganic polyphosphate 21.1 51 0.0018 34.0 3.1 54 279-350 41-97 (258)
125 2r8r_A Sensor protein; KDPD, P 21.0 1.6E+02 0.0055 29.8 6.7 39 15-54 6-44 (228)
126 3av3_A Phosphoribosylglycinami 20.4 2.1E+02 0.0072 28.4 7.4 34 13-52 3-39 (212)
127 3bbn_B Ribosomal protein S2; s 20.2 83 0.0028 32.0 4.3 29 118-146 157-188 (231)
128 2ejb_A Probable aromatic acid 20.2 1.2E+02 0.004 29.7 5.4 34 17-52 3-36 (189)
129 1mvl_A PPC decarboxylase athal 20.1 68 0.0023 32.1 3.6 41 10-53 14-54 (209)
No 1
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A*
Probab=100.00 E-value=1.7e-60 Score=552.96 Aligned_cols=401 Identities=20% Similarity=0.313 Sum_probs=284.1
Q ss_pred HHHHHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEec--CcchhhhhhhhhhcccCCCC
Q 002206 479 RQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKI--SPSKQRLWKHALARHNDKGQ 556 (953)
Q Consensus 479 ~~~~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~--~~~~~~l~~~~~~~~~~~~~ 556 (953)
.+......|...||.+ |.++++|||||||+||||||+||+||||||+++++++++++ .|++
T Consensus 22 R~~~l~~~F~~~fg~~-p~~v~~APGRVnLiGEHtDyngG~VLp~AI~~~~~vav~~~~~~d~~---------------- 84 (520)
T 3v2u_C 22 KHLAVVDAFFQTYHVK-PDFIARSPGRVNLIGEHIDYCDFSVLPLAIDVDMLCAVKILDEKNPS---------------- 84 (520)
T ss_dssp HHHHHHHHHHHHHSSC-CSEEEEEEEEEEEECTTCGGGTCCBEEEEEEEEEEEEEEECCCSSCE----------------
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEcceeEEEeccCeeeCCCEEEEEEeecceEEEEEeccCCCCE----------------
Confidence 3555667788999964 66889999999999999999999999999999999999998 5554
Q ss_pred CCCCeEEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHH---HHHHh------CCC
Q 002206 557 GPMPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV---LMTEL------GVR 627 (953)
Q Consensus 557 ~~~~~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~---~l~~~------g~~ 627 (953)
+++.|.+..+. ...|++++++. ++.+ ......|.+|+++++.. ++++. |..
T Consensus 85 -----i~i~S~~~~~~--~~~~~l~~~~~-----~~~i--------~~~~~~W~~Yv~g~i~~v~~~l~~~~~~~~~g~~ 144 (520)
T 3v2u_C 85 -----ITLTNADPKFA--QRKFDLPLDGS-----YMAI--------DPSVSEWSNYFKCGLHVAHSYLKKIAPERFNNTP 144 (520)
T ss_dssp -----EEEEESSTTSC--CEEEECCTTCC-----CCCC--------CTTSCCHHHHHHHHHHHHHHHHHHHCHHHHSSSC
T ss_pred -----EEEEECCCCCC--ceEEEeccCcc-----cccc--------CcccccHHHHHHHHHHHHHHHHHhhcccccccCC
Confidence 44444321111 01233322210 0111 01236899999997643 24332 334
Q ss_pred CCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcce
Q 002206 628 FEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAH---GLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANK 704 (953)
Q Consensus 628 ~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~---~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~ 704 (953)
. .||++.|.|+||+|+|| |||++||++.|++.++ +.++++.+++++|+.+|+ +.|.|||+|||+++++|+.++
T Consensus 145 ~-~G~~i~i~s~vP~gsGL--SAA~~va~~~Al~~~~~g~~~~l~~~~la~la~~aE~-~vG~~~G~mDQ~as~~G~~g~ 220 (520)
T 3v2u_C 145 L-VGAQIFCQSDIPTGGGL--SSAFTCAAALATIRANMGKNFDISKKDLTRITAVAEH-YVGVNNGGMDQATSVYGEEDH 220 (520)
T ss_dssp C-CCEEEEEEECCCTTSSH--HHHHHHHHHHHHHHHHHCTTCCCBHHHHHHHHTTGGG-GGTCCCCSHHHHHHHHCBTTB
T ss_pred C-CceEEEEecCCCCCCCH--HHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHH-HhCCCCchhhHHHHHhCCCCe
Confidence 4 79999999999999999 9999999999999998 778999999999999997 999999999999999999999
Q ss_pred EEEEeecC-ccceeeeecCC----CeEEEEEeCCC---ccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCC-C
Q 002206 705 LLAMVCQP-AELLGVVEIPS----HIRFWGIDSGI---RHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNG-L 775 (953)
Q Consensus 705 ~~~~~~~~-~~~~~~~~~p~----~~~~vl~dsgv---~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~-~ 775 (953)
++++||++ +++ +.+++|+ ++.|+|+||++ +|.+++++||.||.+|.. |+++|.++++.... .
T Consensus 221 ~l~id~~~~l~~-~~v~~p~~~~~~~~~vI~ns~v~~~k~~la~s~YN~Rr~eCe~--------Aa~~L~~~~g~~~~~~ 291 (520)
T 3v2u_C 221 ALYVEFRPKLKA-TPFKFPQLKNHEISFVIANTLVKSNKFETAPTNYNLRVIEVTV--------AANALATRYSVALPSH 291 (520)
T ss_dssp EEEEECSSSCEE-EEECCCCCSSCEEEEEEEECCCCCCHHHHTTTTHHHHHHHHHH--------HHHHHHHHTTBCCCCC
T ss_pred EEEEEcCCCcee-EEeeCCCccCCCeEEEEEECCCcccccccccchhhHHHHHHHH--------HHHHHHHhhCCccccc
Confidence 99999998 766 7889986 89999999999 788999999999998854 33444332211100 0
Q ss_pred C-CCCccchhhhHHHH--------------------hhhhhHHhcCChhHHHH---HH-----hhcCCccchhhhhhhhc
Q 002206 776 N-NIEPEVDGVELLEA--------------------EASLDYLCNLSPHRFEA---LY-----AKNIPESIVGEEFSKNY 826 (953)
Q Consensus 776 ~-~~~~~~~~~~~l~~--------------------~~~~~~l~~~~~~~~~~---~~-----~~~lp~~i~~~~~~~~~ 826 (953)
. ........++.+.. ...++.+.++..+.|+. .| ...+. ++.++|.+.|
T Consensus 292 ~~~~~~~~~sLRdv~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~yt~~e~~~~l~--~~~~~l~~~~ 369 (520)
T 3v2u_C 292 KDNSNSERGNLRDFMDAYYARYENQAQPWNGDIGTGIERLLKMLQLVEESFSRKKSGFTVHEASTALN--CSREEFTRDY 369 (520)
T ss_dssp CSCSSCTTCCHHHHHHHHHHHHCTTSCCCSSCHHHHHHHHHHHHHHHHHHHTTCTTCBCHHHHHHHTT--SCHHHHHHHH
T ss_pred ccccccccccHHHHhHhhhhhccccccccccchhhHHHHHHHHHHHHHHHhhhccccccHHHHHHhhc--CChhhhhhhh
Confidence 0 00000001111110 00111111111111100 00 00010 1223344444
Q ss_pred CCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccC--C-hHHHHHHHHHHHHhhhhhhh-cCCCCchHHHHH
Q 002206 827 GDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAA--S-DDQLTSLGELLYQCHYSYSA-CGLGSDGTDRLV 902 (953)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~--~-~~~~~~lG~lm~~sh~sl~~-~~vs~~~ld~lv 902 (953)
.+. +++ ..+.|.+++|++|+++||+||.+++++|++++ + .+|++.||+||++||.|||+ ||||||+||.|+
T Consensus 370 l~~-~~~----~~~~~~l~~RA~HVv~E~~Rv~~~~~al~~~~~~~~~~d~~~lg~lm~~sH~slr~~~~vS~peld~lv 444 (520)
T 3v2u_C 370 LTT-FPV----RFQVLKLYQRAKHVYSESLRVLKALKMMTSATFHTDEDFFTDFGRLMNESQASCDKLYECSCIETNQIC 444 (520)
T ss_dssp TSS-SCE----EESCBCHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHH
T ss_pred ccc-ccc----ccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 332 222 23456789999999999999999999999862 1 24799999999999999999 599999999999
Q ss_pred HHHHHhhhcccccCCCCCcccccccccccCceEEEec---c-CChhhhh
Q 002206 903 QLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIG---R-NSLRSSE 947 (953)
Q Consensus 903 ~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~---~-~~~~~~~ 947 (953)
++|++ .|++||||||||||||+++|. + +.++...
T Consensus 445 ~~a~~-----------~Ga~GarlTGaG~GGc~iaLv~~~~~~~~~~~~ 482 (520)
T 3v2u_C 445 SIALA-----------NGSFGSRLTGAGWGGCTIHLVPSGANGNVEQVR 482 (520)
T ss_dssp HHHHH-----------TTCSEEEECSSCSSSEEEEEEEESTTCSHHHHH
T ss_pred HHHHh-----------CCCCEEEEecCCCCceEEEEEcCCCHHHHHHHH
Confidence 99998 699999999999999988876 3 4455443
No 2
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A*
Probab=100.00 E-value=8.4e-50 Score=466.94 Aligned_cols=382 Identities=21% Similarity=0.284 Sum_probs=277.0
Q ss_pred HHHHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCC
Q 002206 480 QMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPM 559 (953)
Q Consensus 480 ~~~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 559 (953)
+..-...|...||. +|.++++||||++|+|||+||+|+.||++||++++++.+++++++.
T Consensus 39 ~~~~~~~f~~~fg~-~~~~~~~APgrv~L~Geh~D~~g~~vl~~AI~~~~~v~v~~~~~~~------------------- 98 (478)
T 2a2c_A 39 LLKLKEMFNSKFGS-IPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYA------------------- 98 (478)
T ss_dssp HHHHHHHHHHHHSS-CCSEEEEEEEEEEEECTTCGGGTCCBEEEEEEEEEEEEEEECSSSC-------------------
T ss_pred HHHHHHHHHHHhCC-CCCEEEEeceEEEEeccceeeCCCeEEEEEecccEEEEEEECCCCe-------------------
Confidence 44455678899996 5678999999999999999999999999999999999999987654
Q ss_pred CeEEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeC
Q 002206 560 PVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSA 639 (953)
Q Consensus 560 ~~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~ 639 (953)
+++.+.+.++ +.|+++++++. + ......|.||+.+++..+++.++.....|++|.|+|+
T Consensus 99 --i~i~~~~~~~----~~~~~~~~~l~-----~----------~~~~~~~~n~v~~a~~~v~~~~~~~~~~g~~i~i~s~ 157 (478)
T 2a2c_A 99 --LQLANTNPLY----PDFSTSANNIQ-----I----------DKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGN 157 (478)
T ss_dssp --EEEEESSTTS----CCEEECCCCC-----------------CCSSCCHHHHHHHHHHHHHHHTTCCSCCCEEEEEEEC
T ss_pred --EEEEECCCCC----cceeccchhcc-----c----------CCCcccHHHHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence 3444332111 12344433321 0 0123679999988888777766541127999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeee
Q 002206 640 VPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVV 719 (953)
Q Consensus 640 iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~ 719 (953)
||+|+|||||||++||++.|++.++|.++++++++++|+.+|+ +.|.++|+|||+++++|+.+.+++++|++... .++
T Consensus 158 IP~g~GLgSSAA~~va~~~al~~~~~~~ls~~~l~~la~~~E~-~~g~~~g~~D~~a~~~G~~g~~~~i~f~~~~~-~~~ 235 (478)
T 2a2c_A 158 IPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSER-YIGTEGGGMDQSISFLAEEGTAKLIEFSPLRA-TDV 235 (478)
T ss_dssp SCTTSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHG-GGTCCCCSHHHHHHHHCBTTBEEEEETTTTEE-EEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh-hcCCCCccHHHHHHHhccCCcEEEEEcCCCce-EEe
Confidence 9999999999999999999999999999999999999999997 58999999999999999777789999988655 788
Q ss_pred ecCCCeEEEEEeCCCccccC-CCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHh
Q 002206 720 EIPSHIRFWGIDSGIRHSVG-GADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLC 798 (953)
Q Consensus 720 ~~p~~~~~vl~dsgv~~~~~-~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 798 (953)
++|+++.|+|+||++++++. +.+||.|+.+|...++++ .++.+.... +. ..++.++ ...
T Consensus 236 ~~~~~~~~vi~~s~~~~~t~~t~~yn~r~~e~~~A~~~L--------~~~~~~~~~-~~-----~~l~d~~------~~~ 295 (478)
T 2a2c_A 236 KLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLL--------AKYKSLQWD-KV-----LRLEEVQ------AKL 295 (478)
T ss_dssp CCCTTEEEEEEECCCCCCGGGSSHHHHHHHHHHHHHHHH--------HHHTTCCTT-TC-----CCHHHHH------HHH
T ss_pred cCCCCcEEEEEeCCCcccccccchhHHHHHHHHHHHHHH--------Hhhhccccc-cc-----chHHhhh------hhh
Confidence 88888999999999999764 579999988875433333 222111000 00 0111110 011
Q ss_pred cCChhHHHHHHhhcCCc------------cchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHH
Q 002206 799 NLSPHRFEALYAKNIPE------------SIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLT 866 (953)
Q Consensus 799 ~~~~~~~~~~~~~~lp~------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~ 866 (953)
....+++-+.....+.+ .++.++|.+.|.+.. + .....|.+++|++|++.|+.||.+++++|+
T Consensus 296 ~~~~~~~v~~v~~~~~~~~~~~~~i~~~l~~~~~~~~~~~l~~~-~----~~~~~~~~~~ra~h~~~e~~rv~~~~~aL~ 370 (478)
T 2a2c_A 296 GISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPN-T----QDVLIFKLYQRAKHVYSEAARVLQFKKICE 370 (478)
T ss_dssp TCCHHHHHHHHHHHSCSSCBCHHHHHHHHTCCHHHHHHHTSCGG-G----TTCCCBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhcccccccHHHHHHHhCccHHHHHhhccccc-c----ccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111110 001112222222100 0 012335678899999999999999999999
Q ss_pred ccCChHHHHHHHHHHHHhhhhhhhc-CCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 867 AAASDDQLTSLGELLYQCHYSYSAC-GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 867 ~~~~~~~~~~lG~lm~~sh~sl~~~-~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
+. .++|++.||+||++||.+||++ +||||++|+|++++++ .|++|+||||||||||+++|.++
T Consensus 371 ~~-~~~d~~~lg~lm~~sh~slr~l~~vs~peld~l~~~a~~-----------~Ga~GarltGAG~GG~viaLv~~ 434 (478)
T 2a2c_A 371 EA-PENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRK-----------FGAQGSRLTGAGWGGCTVSMVPA 434 (478)
T ss_dssp HC-CTTHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHH-----------TTCSEEEECTTCSSSEEEEEEEG
T ss_pred hc-cccHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh-----------CCCcEEEeccCCCccEEEEEEcH
Confidence 71 1139999999999999999996 6999999999999998 69999999999999999888664
No 3
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7
Probab=100.00 E-value=2.7e-48 Score=448.51 Aligned_cols=347 Identities=24% Similarity=0.358 Sum_probs=273.9
Q ss_pred HHHHHHHHhcCCCCCCce-EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCC
Q 002206 480 QMRERKAAAGLFNWEEEI-FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGP 558 (953)
Q Consensus 480 ~~~~~~~~~~~f~~~~~~-~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 558 (953)
..+-+..|...||.+ |. ++++|||||+|+|||+||+|+.+|++||++++++.+++++++.
T Consensus 31 ~~~~~~~f~~~~g~~-~~~~~~~APgkv~L~Geh~d~~G~~~l~~aI~l~~~v~v~~~~~~~------------------ 91 (419)
T 1pie_A 31 LSALTEKFAEVFGDT-KEVEYFFSPGRINLIGEHTDYNGGYVFPASITIGTTGLARLREDKK------------------ 91 (419)
T ss_dssp HHHHHHHHHHHHSCC-CSCEEEEEEEEEEEECCSCTTTTCEEEEEEEEEEEEEEEEECSSSE------------------
T ss_pred HHHHHHHHHHHhCCC-CceEEEEeeEEEEEcccceeeCCCEEEEEEEcccEEEEEEECCCCE------------------
Confidence 334456788899965 55 8899999999999999999999999999999999999987643
Q ss_pred CCeEEEEecCCccCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEe
Q 002206 559 MPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSS 638 (953)
Q Consensus 559 ~~~i~i~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s 638 (953)
+++.+.+.+ . ....+++++++. ......|.||+++++..+ .+.+..+..|++|.+.|
T Consensus 92 ---i~i~~~~~~--~-~~~~~~~~~~~~----------------~~~~~~~~n~v~~~~~~l-~~~g~~~~~g~~i~i~s 148 (419)
T 1pie_A 92 ---VKLYSENFP--K-LGVIEFDLDEVE----------------KKDGELWSNYVKGMIVML-KGAGYEIDKGFELLIKG 148 (419)
T ss_dssp ---EEEEETTCG--G-GCCEEEETTCTT----------------SCCTTCTHHHHHHHHHHH-HHTTCCCCSCEEEEEEE
T ss_pred ---EEEEECCCC--C-cceeEEeccccc----------------CCCCcCHHHHHHHHHHHH-HHhCCCCCCCEEEEEEC
Confidence 333332110 0 001223332210 012357999999887764 45554443699999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceee
Q 002206 639 AVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGV 718 (953)
Q Consensus 639 ~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~ 718 (953)
+||+|+|||||||++||++.|++.++|.++++++|+++|+.+|++++|.|||+|||+++++||.+.++++++++... ++
T Consensus 149 ~IP~gaGLGSSaA~~vA~~~al~~l~g~~ls~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~d~~~~~~-~~ 227 (419)
T 1pie_A 149 EIPTASGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDYIGVNSGILDQFAIGFGEVKKAIELDCNTLKY-EM 227 (419)
T ss_dssp CSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCCCCCSHHHHHHHHCBTTEEEEEETTTCCE-EE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCccchhHHHHHhccCCeEEEeecCCCce-EE
Confidence 99999999999999999999999999999999999999999999999999999999999999999888898877655 78
Q ss_pred eecC-CCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHH
Q 002206 719 VEIP-SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYL 797 (953)
Q Consensus 719 ~~~p-~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 797 (953)
+++| ++++|++++|+++++|...+||.||.+|...++++.+ ...++.|
T Consensus 228 l~~~~~~~~~vl~~~~~~~~t~~~~y~~r~~~~~~a~~~l~~-------------------------------~~~v~~l 276 (419)
T 1pie_A 228 VPVELRDYDIVIMNTNKPRALTESKYNERFAETREALKRMQT-------------------------------RLDIQSL 276 (419)
T ss_dssp EECCCTTEEEEEEECCCCCCTTCHHHHHHHHHHHHHHHHHHH-------------------------------HCCCSSG
T ss_pred eecCCCCcEEEEEECCCccccccchHHHHHHHHHHHHHHHhh-------------------------------ccccCch
Confidence 8887 6899999999999999888999998877432222211 0112335
Q ss_pred hcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHH
Q 002206 798 CNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSL 877 (953)
Q Consensus 798 ~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~l 877 (953)
++.+++.++.. ...+|+. ..++|+.|++.|+.|+.++.++|+++ |++.|
T Consensus 277 ~~~~~~~~~~~-~~~l~~~--------------------------~~~~~~~~~v~e~~r~~~~~~al~~~----d~~~l 325 (419)
T 1pie_A 277 GELSNEEFDAN-TDLIGDE--------------------------TLIKRARHAVYENNRTKIAQKAFVAG----NLTKF 325 (419)
T ss_dssp GGCCHHHHHHT-GGGTCCH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHT----CHHHH
T ss_pred hhCCHHHHHHH-HhhcCcH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHcC----CHHHH
Confidence 56666555442 1222210 24568899999999999999999986 89999
Q ss_pred HHHHHHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 878 GELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 878 G~lm~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|++|+++|.+|++ +++++|++|+|++.+++. +|++|+||||||||||+++|.++
T Consensus 326 g~lm~~~~~~l~~~~~~~~p~l~~l~~~a~~~----------~Ga~ga~lsGaG~Gg~v~al~~~ 380 (419)
T 1pie_A 326 GELLNASHASLKDDYEVTGLELDTLAETAQKQ----------AGVLGARMTGAGFGGCAIALVAH 380 (419)
T ss_dssp HHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHS----------TTEEEEEECSSCSSSEEEEEEEG
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHhc----------CCCceeeEecCCCCeEEEEEEch
Confidence 9999999999999 799999999999999981 39999999999999999888654
No 4
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7
Probab=100.00 E-value=7.6e-47 Score=433.83 Aligned_cols=344 Identities=24% Similarity=0.346 Sum_probs=265.4
Q ss_pred HHHHHHHHHhcCCCCCCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCC
Q 002206 479 RQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGP 558 (953)
Q Consensus 479 ~~~~~~~~~~~~f~~~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 558 (953)
...+....|...||.+ +.+.++|||||+|+|||+||+|+.+|++||++++++.+++++++.+
T Consensus 19 ~~~~~~~~f~~~~~~~-~~~~~~APgkv~L~Geh~Dy~~~~~l~~ai~~~~~v~v~~~~~~~i----------------- 80 (399)
T 1wuu_A 19 LLAEARRAFREEFGAE-PELAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLV----------------- 80 (399)
T ss_dssp HHHHHHHHHHHHHSSC-CSEEEEEEEEEEEECTTCGGGTCEEEEEEEEEEEEEEEEEETTCEE-----------------
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEeeeeEEEeccccccCCCEEEeEEecccEEEEEEECCCCeE-----------------
Confidence 3445567788999964 6688999999999999999999999999999999999998876543
Q ss_pred CCeEEEEecCCccCCCC-CceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEE
Q 002206 559 MPVLQIVSYGSELSNRG-PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVS 637 (953)
Q Consensus 559 ~~~i~i~s~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~ 637 (953)
++.+.+.+ ... ..++++++++. +. ...+...|.||+++++..+ .+... .|++|.++
T Consensus 81 ----~i~~~~~~--~~~~~~~~~~~~~~~----~~---------~~~~~~~~~n~v~~a~~~l---~~~~~-~g~~i~i~ 137 (399)
T 1wuu_A 81 ----SLLTTSEG--ADEPQRLQFPLPTAQ----RS---------LEPGTPRWANYVKGVIQYY---PAAPL-PGFSAVVV 137 (399)
T ss_dssp ----EEEECCSS--SCSCSEEEEECCCSS----CC---------CCCCSSGGGHHHHHHHHHC---SSSCC-CEEEEEEE
T ss_pred ----EEEECCCC--CccccceEEecCccc----cc---------cccCCCCHHHHHHHHHHHh---cCCCC-CCeEEEEE
Confidence 33332110 000 00122222100 00 0122457999999987654 34444 79999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCcccee
Q 002206 638 SAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLG 717 (953)
Q Consensus 638 s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~ 717 (953)
|+||+|+|||||||++||++.|++.++|.++++++++++|+.+|+.++|.|||+|||+++++||.+.++++++++... +
T Consensus 138 s~IP~gaGLGSSaA~~vA~~~al~~l~~~~l~~~~l~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~-~ 216 (399)
T 1wuu_A 138 SSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSLET-S 216 (399)
T ss_dssp ECSCTTSSSCHHHHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHHHHTCCCCCSHHHHHHHHCCTTEEEEEETTTCCE-E
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccHHHHHHHhccCCeEEEEecCCCce-E
Confidence 999999999999999999999999999999999999999999999999999999999999999999888888876555 6
Q ss_pred eeecC-CCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhH
Q 002206 718 VVEIP-SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDY 796 (953)
Q Consensus 718 ~~~~p-~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 796 (953)
++++| +++.|++++|+++++|....||.|+.++.. |.+.|.. +.
T Consensus 217 ~~~~~~~~~~~vl~~~~~~~~t~~~~y~~r~~~~~~--------a~~~l~~---------------------------~~ 261 (399)
T 1wuu_A 217 LVPLSDPKLAVLITNSNVRHSLASSEYPVRRRQCEE--------VARALGK---------------------------ES 261 (399)
T ss_dssp EEECCCSSEEEEEEEEEEEC--CTTTHHHHHHHHHH--------HHHHTTC---------------------------SS
T ss_pred EecCCCCCeEEEEEECCCccccccccHHHHHHHHHH--------HHHHhCh---------------------------hh
Confidence 78877 489999999999999998899988876521 2222211 11
Q ss_pred HhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHH
Q 002206 797 LCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTS 876 (953)
Q Consensus 797 l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~ 876 (953)
+++++++.+.... ..+++ ..++|+.|++.|+.|+.++.++|+++ |++.
T Consensus 262 l~~~~~~~~~~~~-~~l~~---------------------------~~~~r~~~~~~e~~r~~~~~~al~~~----d~~~ 309 (399)
T 1wuu_A 262 LREVQLEELEAAR-DLVSK---------------------------EGFRRARHVVGEIRRTAQAAAALRRG----DYRA 309 (399)
T ss_dssp TTSCCHHHHTTGG-GGSCH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred hhcCCHHHHHHHH-hhcCH---------------------------HHHHHHHHHHhhHHHHHHHHHHHHcC----CHHH
Confidence 3333333332210 11211 14568899999999999999999986 8999
Q ss_pred HHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 877 LGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 877 lG~lm~~sh~sl~~-~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
||++|++||.+|++ +++++|++|+|++.++++ .|++|+||||||||||+++|.++
T Consensus 310 lg~~m~~~h~~l~~~~~~~~p~l~~l~~~a~~~----------~Ga~ga~~sGaG~Gg~v~~l~~~ 365 (399)
T 1wuu_A 310 FGRLMVESHRSLRDDYEVSCPELDQLVEAALAV----------PGVYGSRMTGGGFGGCTVTLLEA 365 (399)
T ss_dssp HHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHTS----------TTEEEEEECSSCSEEEEEEEEEG
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc----------CCceEEeeecCCCccEEEEEEcc
Confidence 99999999999987 899999999999999861 48999999999999999888664
No 5
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.4e-46 Score=418.44 Aligned_cols=293 Identities=16% Similarity=0.173 Sum_probs=211.8
Q ss_pred eEEEEcCcceecccccccc------CCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCc
Q 002206 497 IFVARAPGRLDVMGGIADY------SGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSE 570 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~d~------~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~ 570 (953)
+++++|||||+|+|||+|| +||.||++||+++++++++++++++++| .+.+.
T Consensus 3 mi~~~APgRvnL~GehtD~~~~~~~~gG~vl~~AId~~~~v~i~~~~d~~i~i---------------------~s~~~- 60 (357)
T 3k85_A 3 LVRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYCTIEETNSGRIEI---------------------NAYDA- 60 (357)
T ss_dssp CEEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEEEEEEEEEEECSSSEEEE---------------------EETTT-
T ss_pred EEEEECceEEEEecCCccCcchhhcCCCEEEEEEEeCcEEEEEEECCCCeEEE---------------------EECCC-
Confidence 4689999999999999999 8999999999999999999998765544 33211
Q ss_pred cCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHH
Q 002206 571 LSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSA 650 (953)
Q Consensus 571 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSA 650 (953)
. ...++++++ + .+...|.||+++++..+. +.+.....||+|.+.++||.|+||||||
T Consensus 61 -~---~~~~~~~~~------~------------~~~~~~~~~v~~~~~~l~-~~~~~~~~g~~i~i~~~iP~g~GLgSSa 117 (357)
T 3k85_A 61 -Q---CCKSYLSMS------Q------------LEIDGEASLIKGVYNRII-RDYRLEPKSFKITTYNDAPAGSGLGTSS 117 (357)
T ss_dssp -T---EEEEEECCS------S------------CCCCSSSHHHHHHHHHHH-HHTTCCCCCEEEEEEESSCSSSSSCHHH
T ss_pred -C---ceEEEeccc------c------------ccccchHHHHHHHHHHHH-HhcCCCCCCEEEEEecCCCCCCCchHHH
Confidence 0 011223221 0 123579999999988754 4443212799999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCC------
Q 002206 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSH------ 724 (953)
Q Consensus 651 A~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~------ 724 (953)
|++||++.|++.+++.++++++++++|+.+|+.++|.|||+|||+++++||.+.+.+.++++..+ +++++|+.
T Consensus 118 a~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~~G~~D~~a~~~Gg~~~~~~~~~~~~~~-~~l~~~~~~~~~l~ 196 (357)
T 3k85_A 118 TMVVCILKAFIEWLSLPLGDYETSRLAYEIERKDLGLSGGKQDQYAAAFGGFNYMEFLQNDLVIV-NPLKMKRWIVDELE 196 (357)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHCSEEEEEEETTTEEEE-EEECCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHccCCCcHHHHHHHHhCCceEEEEeCCCceeE-EEEecChhhhhhcC
Confidence 99999999999999999999999999999999999999999999999999987665555444333 56777653
Q ss_pred eEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhH
Q 002206 725 IRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHR 804 (953)
Q Consensus 725 ~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~ 804 (953)
..++|++||++|++.. ++.++. + .+
T Consensus 197 ~~lvi~~t~~~~~a~~---------------~l~~~~------------------------~---------~~------- 221 (357)
T 3k85_A 197 SSMVLYFTGRSRSSAA---------------IINEQK------------------------K---------NT------- 221 (357)
T ss_dssp HTEEEECC------------------------------------------------------------------------
T ss_pred ceEEEEECCCcccHHH---------------HHHHHH------------------------H---------Hh-------
Confidence 6899999999887531 111100 0 00
Q ss_pred HHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHh
Q 002206 805 FEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQC 884 (953)
Q Consensus 805 ~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~s 884 (953)
...++ ...|+.|.+.| |+.+++++|+++ |++.||++|+++
T Consensus 222 ------~~~~~----------------------------~~~~~~~~i~~--~~~~~~~aL~~~----d~~~lg~lm~~~ 261 (357)
T 3k85_A 222 ------SEGNQ----------------------------TAIEAMHKIKQ--SAIDTKLALLKG----DVGEFARILGEG 261 (357)
T ss_dssp ----------C----------------------------CTTHHHHHHHH--HHHHHHHHHTTT----CHHHHHHHHHHH
T ss_pred ------hcCcH----------------------------HHHHHHHHHHH--HHHHHHHHHHcC----CHHHHHHHHHHH
Confidence 00000 12356777765 788999999986 999999999999
Q ss_pred hhhhhh--cCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 885 HYSYSA--CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 885 h~sl~~--~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|.++++ ++||||++|+|++.+++ .|++||||||||+|||+++|.++
T Consensus 262 ~~~l~~~~~~vs~p~ld~l~~~a~~-----------~Ga~GaklsGaG~gG~vial~~~ 309 (357)
T 3k85_A 262 WENKKKMAGAITNPMIQEAFDVATG-----------AGAMAGKVSGAGGGGFIMFVVEP 309 (357)
T ss_dssp HHHTTC-----------CCSCTTTT-----------SCCSEEEECCCC---CEEEECCH
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHh-----------cCCeEeEecccCCCCEEEEEecH
Confidence 999997 69999999999998886 69999999999999999988764
No 6
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A*
Probab=100.00 E-value=5.5e-44 Score=403.57 Aligned_cols=313 Identities=23% Similarity=0.383 Sum_probs=246.1
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCc
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (953)
++++|||||+|+|||+||+|+.+|++||++++++.+++++++++++.+ .+ .. ..
T Consensus 2 ~~~~aP~ki~L~Ge~~d~~~~~~l~~ai~~~~~v~v~~~~~~~i~i~~---------------------~~--~~---~~ 55 (350)
T 2cz9_A 2 IKVKSPGRVNLIGEHTDYTYGYVMPMAINLYTKIEAEKHGEVILYSEH---------------------FG--EE---RK 55 (350)
T ss_dssp EEEEEEEEEEEECTTCGGGTCEEEEEEEEEEEEEEEEEESSEEEEETT---------------------TT--EE---EE
T ss_pred eEEEeccEEEEeecChhhCCCEEEEEEeeceEEEEEEECCCCeEEEEE---------------------CC--CC---cc
Confidence 578999999999999999999999999999999999988765443321 00 00 00
Q ss_pred eeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 002206 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (953)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~ 657 (953)
.++ ++. .+...|.||+++++.. +++.+... .|++|.++++||.|+|||||||++||++
T Consensus 56 ~~~-l~~-------------------~~~~~~~~~~~~~~~~-l~~~~~~~-~g~~i~i~s~IP~g~GLGSSaA~~vA~~ 113 (350)
T 2cz9_A 56 FSL-NDL-------------------RKENSWIDYVKGIFWV-LKESDYEV-GGIKGRVSGNLPLGAGLSSSASFEVGIL 113 (350)
T ss_dssp ECT-TCC-------------------CCCSSTHHHHHHHHHH-HHHTTCCC-CEEEEEEECSCCTTSSSCHHHHHHHHHH
T ss_pred ccc-cCC-------------------CCCCcHHHHHHHHHHH-HHhcCCCC-CCeEEEEECCCCCCCCcchHHHHHHHHH
Confidence 010 100 1135799999887664 45566654 7999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCccc
Q 002206 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHS 737 (953)
Q Consensus 658 ~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~ 737 (953)
.|++.++|.++++++++++|+.+|.+++|+|||++|++++++|+.+.++++++++... +++++|+++++++++++++|+
T Consensus 114 ~al~~l~~~~l~~~el~~la~~~e~~~~g~~~gi~d~~~~~~g~~~~~~~~d~~~~~~-~~l~~~~~~~~vl~~~~~~~~ 192 (350)
T 2cz9_A 114 ETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHTLDY-EYIPFPKDVSILVFYTGVRRE 192 (350)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHTTCCCCCSHHHHHHHHCCTTEEEEEETTTCCE-EEEECCTTEEEEEEECSCC--
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCccchhHHHHHhcCCCeEEEEecCCCcE-EEEcCCCCcEEEEEECCCCCc
Confidence 9999999999999999999999999999999999999999999998899999877555 788888899999999999988
Q ss_pred cCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCccc
Q 002206 738 VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESI 817 (953)
Q Consensus 738 ~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i 817 (953)
+.+..|+.|+.+|.. |.+.+. ++.|+++.++++ ..+|+
T Consensus 193 ~~t~~~~~r~~~~~~--------a~~~~~---------------------------~~~lr~~~~~~~-----~~l~~-- 230 (350)
T 2cz9_A 193 LASSEYAERKHIAEE--------SLKILG---------------------------KGSSKEVREGEL-----SKLPP-- 230 (350)
T ss_dssp --CHHHHHHHHHHHH--------HHHHHT---------------------------CSCGGGCCGGGG-----GGSCH--
T ss_pred cccchHHHHHHHHHH--------HHHHhC---------------------------hhhhhhCCHHHH-----hhCCH--
Confidence 776668877665521 111110 112333333221 11221
Q ss_pred hhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhh-cCCCCc
Q 002206 818 VGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSA-CGLGSD 896 (953)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~-~~vs~~ 896 (953)
.++++..|++.|+.|+.++.++|+++ |++.||++|+++|.+|++ +++++|
T Consensus 231 -------------------------~~~~~~~~~~~~~~~~~~~~~al~~~----d~~~lg~~~~~~~~~l~~~~~~~~p 281 (350)
T 2cz9_A 231 -------------------------LHRKFFGYIVRENARVLEVRDALKEG----NVEEVGKILTTAHWDLAKNYEVSCK 281 (350)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred -------------------------HHHHHHHHHhhHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 12346789999999999999999986 899999999999999998 899999
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 897 GTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 897 ~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
++|++++.+++ .|++|+||||+|||||+++|.++
T Consensus 282 ~l~~l~~~~~~-----------~Ga~ga~lsGaG~G~~v~~l~~~ 315 (350)
T 2cz9_A 282 ELDFFVERALK-----------LGAYGARLTGAGFGGSAIALVDK 315 (350)
T ss_dssp HHHHHHHHHHH-----------TTCSEEEECSSCSSSEEEEEEEG
T ss_pred HHHHHHHHHHH-----------cCCCEEEEecCCCceEEEEEEch
Confidence 99999999998 58999999999999999888664
No 7
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua}
Probab=100.00 E-value=1.3e-41 Score=383.80 Aligned_cols=287 Identities=16% Similarity=0.171 Sum_probs=220.8
Q ss_pred ceEEEEcCcceecccccccc-CCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCC
Q 002206 496 EIFVARAPGRLDVMGGIADY-SGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNR 574 (953)
Q Consensus 496 ~~~~~~APGrv~l~GeH~d~-~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~ 574 (953)
.+++++|||||+|+|||+|| +|++||++||+++++++++++++.. | .+.+ +..
T Consensus 5 ~~i~~~APGrv~L~GEh~~~~~g~~~l~~Ai~~~~~v~v~~~~~~~--i---------------------~s~~--~~~- 58 (365)
T 3k17_A 5 NKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNE--L---------------------WIPH--YEN- 58 (365)
T ss_dssp CCEEEEEEEEEEEECTTGGGSTTCEEEEEEEEEEEEEEEEECSSCE--E---------------------ECTT--CSS-
T ss_pred eEEEEEecceEEEecccEEecCCCEEEEEEccCcEEEEEEECCCcE--E---------------------EecC--CCc-
Confidence 36889999999999999999 5999999999999999999987642 2 2211 100
Q ss_pred CCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHH---HhCCCCCCCEEEEEEeCCCC----CCCCc
Q 002206 575 GPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMT---ELGVRFEDSISMLVSSAVPE----GKGVS 647 (953)
Q Consensus 575 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~---~~g~~~~~g~~i~i~s~iP~----g~GLg 647 (953)
.+++++++. + ......| +|++++++.+.+ +.|... .|++|.|+|+||. ++|||
T Consensus 59 --~~~~~~~~~------~----------~~~~~~~-~yv~~~i~~~~~~~~~~g~~~-~g~~i~i~s~iP~~~g~~~GLg 118 (365)
T 3k17_A 59 --PVSWPIGGE------L----------KPDGEHW-TFTAEAINIATTFLKSEGIEL-TPVKMVIETELIDQSGAKYGLG 118 (365)
T ss_dssp --CBCCCTTSC------C----------CCSCGGG-HHHHHHHHHHHHHHHHTTCCC-CCEEEEEEESSBCTTSCBCSSC
T ss_pred --ceeeecccC------C----------CCCCChH-HHHHHHHHHHHHHHHhcCCCC-CCEEEEEEcCCCCCCCCCCccc
Confidence 122232210 0 0123456 999999886543 446655 7999999999996 57999
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEe-ec---------------
Q 002206 648 SSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV-CQ--------------- 711 (953)
Q Consensus 648 SSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~-~~--------------- 711 (953)
||||++||++.|++.+++.++++++++++|+.+|+.++|.++| |||++|++|| ++++. +.
T Consensus 119 SSaa~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~g~~~g-~D~~~~~~Gg---~~~~~~~~~~~~~~~~~~~~l~~ 194 (365)
T 3k17_A 119 SSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSC-GDIASCMYGG---WIAYTTFDQEWVKHRLAYKSLEW 194 (365)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHSSCCS-HHHHHHHHCS---EEEEECCCHHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCc-ccHHHHhcCC---EEEEecCCHHHhhhhcccchhhh
Confidence 9999999999999999999999999999999999999996555 8999999999 45554 22
Q ss_pred -------CccceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchh
Q 002206 712 -------PAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDG 784 (953)
Q Consensus 712 -------~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~ 784 (953)
...+ +++++|++ +|+++|||++++|. ++++.+.
T Consensus 195 l~~~~w~~~~~-~~l~~~~~-~lll~~t~~~~sT~---------------~~~~~v~----------------------- 234 (365)
T 3k17_A 195 FMKEPWPMLQI-ETLEEPVP-TFSVGWTGTPVSTG---------------KLVSQIH----------------------- 234 (365)
T ss_dssp HHHSCCTTCEE-EEECCCSS-EEEEEECSCCCCHH---------------HHHHHHH-----------------------
T ss_pred hhccCCCCcce-eeccCCcc-cEEEEECCCccchH---------------HHHHHHH-----------------------
Confidence 1222 56777778 99999999999874 1222211
Q ss_pred hhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchh-hhHHHHHH
Q 002206 785 VELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYEN-FRVKAFKA 863 (953)
Q Consensus 785 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~-~Rv~~~~~ 863 (953)
.+++ ..| .+.+|++.|. .++.++.+
T Consensus 235 -----------~~~~------------~~~-------------------------------~~~~~~~~~~~~~~~~~~~ 260 (365)
T 3k17_A 235 -----------AFKQ------------EDS-------------------------------KNYQHFLTRNNEIMKQIIQ 260 (365)
T ss_dssp -----------HHHH------------HCH-------------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHH------------hCh-------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 0110 001 0134566664 46789999
Q ss_pred HHHccCChHHHHHHHHHHHHhhhhhhhcCC------CCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEE
Q 002206 864 LLTAAASDDQLTSLGELLYQCHYSYSACGL------GSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICV 937 (953)
Q Consensus 864 ~l~~~~~~~~~~~lG~lm~~sh~sl~~~~v------s~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~ 937 (953)
+|+++ |++.||++|+++|.+|+++++ ++|++|+|++.+++ .|++ |||||||+|||+++
T Consensus 261 aL~~g----d~~~lg~lm~~~~~~l~~l~v~~~~~is~p~ld~l~~~a~~-----------~Ga~-ak~sGAGgGg~via 324 (365)
T 3k17_A 261 AFHTK----DEELLYSSIKENRRILQELGTKAGVNIETSLLKELADSAEN-----------MGGA-GKSSGSGGGDCGIA 324 (365)
T ss_dssp HHHHT----CHHHHHHHHHHHHHHHHHHHHHHTCCCSCHHHHHHHHHHHH-----------TTSE-EEECTTCSSSEEEE
T ss_pred HHHhC----CHHHHHHHHHHHHHHHHHhhhhcCCcccCHHHHHHHHHHHh-----------cCCE-EEecCCCCCCEEEE
Confidence 99986 999999999999999999876 99999999999998 5777 99999999999999
Q ss_pred eccCC
Q 002206 938 IGRNS 942 (953)
Q Consensus 938 l~~~~ 942 (953)
|.++.
T Consensus 325 l~~~~ 329 (365)
T 3k17_A 325 FSKTK 329 (365)
T ss_dssp EESSH
T ss_pred EECCH
Confidence 97763
No 8
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A
Probab=100.00 E-value=1.8e-41 Score=388.81 Aligned_cols=312 Identities=20% Similarity=0.213 Sum_probs=221.1
Q ss_pred ceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCC
Q 002206 496 EIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 575 (953)
Q Consensus 496 ~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 575 (953)
++++++|||||+|+|||+||+|++||++||++++++.+++++++++++.+.+. ..
T Consensus 4 ~~~~~~APgrv~L~Geh~d~~g~~~l~~ai~~~~~v~v~~~~~~~i~i~~~~~------------~~------------- 58 (395)
T 1kvk_A 4 EVLLVSAPGKVILHGEHAVVHGKVALAVALNLRTFLVLRPQSNGKVSLNLPNV------------GI------------- 58 (395)
T ss_dssp SCEEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEECSSSEEEEEETTT------------TE-------------
T ss_pred CcEEEEeCeEEEEecCCeeeECCEeeeeEeeccEEEEEEECCCCeEEEEcCCC------------Cc-------------
Confidence 35789999999999999999999999999999999999999876655432110 00
Q ss_pred CceeccCCccccC----CCCc-----chHhhhccc-CCCCCCchHHHH-----HHHHHHHHHHhCCC-CCCCEEEEEEeC
Q 002206 576 PTFDMDLSDFMDE----GKPM-----SYEKAKKYF-DTNPSQKWAAYV-----AGTILVLMTELGVR-FEDSISMLVSSA 639 (953)
Q Consensus 576 ~~~~~~l~~~~~~----~~~~-----~~~~~~~~~-~~~~~~~w~~y~-----~~~~~~~l~~~g~~-~~~g~~i~i~s~ 639 (953)
.++++++++... +.+. ..+.. ..+ .......|.+|+ +.++..+.+..+.. ...|++|.++|+
T Consensus 59 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~g~~i~i~s~ 136 (395)
T 1kvk_A 59 -KQVWDVATLQLLDTGFLEQGDVPAPTLEQL-EKLKKVAGLPRDCVGNEGLSLLAFLYLYLAICRKQRTLPSLDIMVWSE 136 (395)
T ss_dssp -EEEEEHHHHHTSCC-----------------CHHHHHHTSSCCCSCTTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEES
T ss_pred -eEEEEhHhhhhhhcccccccccccccHHHH-HHHHHHhccccccchhhHHHHHHHHHHHHHHhccccCCCCEEEEEEec
Confidence 011222211000 0000 00000 000 000123788984 33333222233431 127999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhCC-----CCC-------H---HHHHHHHHHhhccccCCCCCccchhhhhccCcce
Q 002206 640 VPEGKGVSSSASVEVASMSAIAAAHGL-----NIH-------P---RDLALLCQKVENHIVGAPCGVMDQMASACGEANK 704 (953)
Q Consensus 640 iP~g~GLgSSAA~~va~~~al~~~~~~-----~l~-------~---~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~ 704 (953)
||.|+|||||||++||++.|++.+++. +++ + .+++++|+.+|+.++|.|||+ ||+++++||
T Consensus 137 iP~g~GLGSSaA~~va~~~al~~l~~~~~~~~~l~~~~~~~~~~~l~~l~~~A~~~E~~~~G~~sG~-D~~~~~~Gg--- 212 (395)
T 1kvk_A 137 LPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGV-DNSVSTWGG--- 212 (395)
T ss_dssp SCTTSSSCHHHHHHHHHHHHHHHHTTSSCCGGGGCCSEECCCHHHHHHHHHHHHHHHHHHHSSCCSH-HHHHHHHCS---
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHhCcccccccccccccccchhhHHHHHHHHHHhhheEecCCCCc-chHHhhhcc---
Confidence 999999999999999999999999999 788 7 456677999999999999997 999999998
Q ss_pred EEEEeecCccceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchh
Q 002206 705 LLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDG 784 (953)
Q Consensus 705 ~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~ 784 (953)
++++ ++..+ ++++++++++|++++|+++++|.. +++.+.
T Consensus 213 ~~~~--~~~~~-~~l~~~~~~~~vl~~~~~~~~T~~---------------~~~~~~----------------------- 251 (395)
T 1kvk_A 213 ALRY--QQGKM-SSLKRLPALQILLTNTKVPRSTKA---------------LVAGVR----------------------- 251 (395)
T ss_dssp EEEE--SSSCE-EECSCCCCEEEEEEECCCCCCHHH---------------HHHHHH-----------------------
T ss_pred eEEE--cCCCc-eeccCCCCcEEEEEECCCCCchHH---------------HHHHHH-----------------------
Confidence 3444 44444 677767789999999999998742 121110
Q ss_pred hhHHHHhhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHH-HH
Q 002206 785 VELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAF-KA 863 (953)
Q Consensus 785 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~-~~ 863 (953)
. +.+ ..|+.+. .+++++.|++.|+.|+..+ ..
T Consensus 252 --~---------~~~------------~~~~~~~------------------------~~~~~~~~~~~~~~~~l~~~~~ 284 (395)
T 1kvk_A 252 --S---------RLI------------KFPEIMA------------------------PLLTSIDAISLECERVLGEMAA 284 (395)
T ss_dssp --H---------HHH------------HSHHHHH------------------------HHHHHHHHHHHHHHHHHHHHTT
T ss_pred --H---------HHH------------HCHHHHH------------------------HHHHHHHHHHHHHHHHHHhhhc
Confidence 0 000 0111000 1335788899998887766 56
Q ss_pred HHHccCChHHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccCC
Q 002206 864 LLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNS 942 (953)
Q Consensus 864 ~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~~ 942 (953)
+|+. +|++.||++|+++|.+|+++++++|++|+|++.+++ .|+ |+||||||||||+++|.+++
T Consensus 285 al~~----~d~~~lg~lm~~~~~~l~~~~~~~p~l~~l~~~a~~-----------~Ga-ga~~sGaG~Gg~v~~l~~~~ 347 (395)
T 1kvk_A 285 APVP----EQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAA-----------HGL-HSKLTGAGGGGCGITLLKPG 347 (395)
T ss_dssp CCCH----HHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH-----------TTC-EEEECSSCSSSEEEEEECTT
T ss_pred cccH----HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-----------cCC-ceeeccCCCCCEEEEEecCC
Confidence 6666 499999999999999999999999999999999998 588 99999999999999886643
No 9
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A
Probab=100.00 E-value=1.8e-40 Score=372.31 Aligned_cols=278 Identities=16% Similarity=0.061 Sum_probs=210.3
Q ss_pred eEEEEcCcceeccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCC
Q 002206 497 IFVARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 575 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~d~~-g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 575 (953)
++.++|||||+|+|||++++ |+++|++||++++++.++++++.++ .+...+
T Consensus 1 mi~v~apGKviL~GEhaVv~~G~~Ala~ai~~~~~v~i~~~~~~~i-----------------------~~~~~~----- 52 (335)
T 3gon_A 1 MIAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRI-----------------------YSDMFD----- 52 (335)
T ss_dssp CEEEEEEEEEEEECTTGGGSTTCEEEEEEEEEEEEEEEEECSSCEE-----------------------EETTSS-----
T ss_pred CEEEEECCEEEEEeeeeEEcCCCcEEEEEecceEEEEEEECCCCEE-----------------------EEeCCC-----
Confidence 46899999999999999988 9999999999999999999876432 221100
Q ss_pred CceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCC---CCCchHHHH
Q 002206 576 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEG---KGVSSSASV 652 (953)
Q Consensus 576 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g---~GLgSSAA~ 652 (953)
+.+++.. .....-|.++++.+. .++++.+..+ +|+++.|+|++|.+ +|||||||+
T Consensus 53 --~~~~~~~------------------~~~~~~~~~~i~~~~-~~l~~~~~~~-~~~~i~I~s~lp~~~~~~GLgSSaa~ 110 (335)
T 3gon_A 53 --FAVDLRP------------------NPDYSLIQETIALMG-DFLAVRGQNL-RPFSLAIYGKMEREGKKFGLGSSGSV 110 (335)
T ss_dssp --SCBCSSC------------------CTTTHHHHHHHHHHH-HHHHHTTCCC-CCEEEEEECCSEETTEECSSCHHHHH
T ss_pred --cccccCc------------------CCCcHHHHHHHHHHH-HHHHHcCCCC-CceEEEEEecCCcccCCCCcchHHHH
Confidence 1111100 001112344444433 3456677776 89999999999987 699999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCcc------------------
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE------------------ 714 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~------------------ 714 (953)
+||++.||+.+++.++++++++++|+.+|+.++|.+|| |||+++++||. +++.+.+..
T Consensus 111 ~va~~~al~~~~~~~~~~~~l~~la~~~E~~~~g~~sg-~D~a~a~~Gg~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (335)
T 3gon_A 111 VVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSM-GDLACIAAEDL---VLYQSFDRQKVAAWLEEENLATVLERD 186 (335)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCCSCS-HHHHHHHHTSC---EEEECCCHHHHHHHHHHSCHHHHHHSC
T ss_pred HHHHHHhhhhcccccchHHHHHHHHHHHHHHhcCCCCC-CCcceeecCCe---EEEEeCCccccceeecccchhheeccc
Confidence 99999999999999999999999999999999999999 89999999995 444332110
Q ss_pred ---ceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHh
Q 002206 715 ---LLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAE 791 (953)
Q Consensus 715 ---~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 791 (953)
..++++.+..+++++++++.+++|. .+++.+..
T Consensus 187 ~~~~~~~~~~~~~~~l~~~~~~~~~~t~---------------~~v~~v~~----------------------------- 222 (335)
T 3gon_A 187 WGFSISQVKPTLECDFLVGWTKEVAVSS---------------HMVQQIKQ----------------------------- 222 (335)
T ss_dssp CCCEEEECCCCSCCEEEEEECCCCCCHH---------------HHHHHHGG-----------------------------
T ss_pred ccceeEEcCCccccceEEeecCChhhHH---------------HHHHHHHH-----------------------------
Confidence 1134555678899999999888763 12222210
Q ss_pred hhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCCh
Q 002206 792 ASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASD 871 (953)
Q Consensus 792 ~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~ 871 (953)
.. ...++...+.+|.++.++|+++
T Consensus 223 --------------------~~---------------------------------~~~~~~~~~~~~~~~~~aL~~~--- 246 (335)
T 3gon_A 223 --------------------NI---------------------------------NQNFLTSSKETVVSLVEALEQG--- 246 (335)
T ss_dssp --------------------GC---------------------------------CHHHHHHHHHHHHHHHHHHHHT---
T ss_pred --------------------Hh---------------------------------HHHHHHHHHHHHHHHHHHHHhC---
Confidence 00 0011222345788999999986
Q ss_pred HHHHHHHHHHHHhhhhhhhc--CCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 872 DQLTSLGELLYQCHYSYSAC--GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 872 ~~~~~lG~lm~~sh~sl~~~--~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|++.||+||++||.+|+++ ++|+|++|+|++++++ .|+ ||||||||||||+++|.++
T Consensus 247 -d~~~lg~lm~~~h~~l~~l~~~is~p~ld~l~~~a~~-----------~g~-~akltGAG~Ggc~ial~~~ 305 (335)
T 3gon_A 247 -KSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQD-----------LQA-VAKSSGAGGGDCGIALSFD 305 (335)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTTTT-----------SSE-EEEECTTCSSSEEEEEECS
T ss_pred -cHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHh-----------CCc-EEEEccccchheEEEEECC
Confidence 9999999999999999994 7899999999999987 564 8999999999999999875
No 10
>2pg9_A Phosphomevalonate kinase; GHMP kinase superfamily, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A* 3gon_A*
Probab=100.00 E-value=1.8e-39 Score=363.20 Aligned_cols=276 Identities=17% Similarity=0.111 Sum_probs=211.4
Q ss_pred eEEEEcCcceecccccc-ccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCC
Q 002206 497 IFVARAPGRLDVMGGIA-DYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 575 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~-d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 575 (953)
++.++|||||+|+|||+ ||+|++||++||++++++.++++++ + +|.+..
T Consensus 3 mi~~~aPgkv~L~GeH~v~y~G~~~l~~Ai~~~~~v~v~~~~~--~---------------------~i~s~~------- 52 (337)
T 2pg9_A 3 MIAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDS--Y---------------------RIYSDM------- 52 (337)
T ss_dssp CEEEEEEEEEEEECTTGGGSTTCEEEEEEEEEEEEEEEEECSS--C---------------------EEEETT-------
T ss_pred eEEEeeCceEEEeccceEecCCCEEEEEEccccEEEEEEeCCc--E---------------------EEecCC-------
Confidence 46799999999999999 6779999999999999999998753 2 233321
Q ss_pred CceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHH---hCCCCCCCEEEEEEeCCCCC---CCCchH
Q 002206 576 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTE---LGVRFEDSISMLVSSAVPEG---KGVSSS 649 (953)
Q Consensus 576 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~---~g~~~~~g~~i~i~s~iP~g---~GLgSS 649 (953)
+...++ ..+...| +|++++++.+.+. .|... .||+|.|+|+||.+ +|||||
T Consensus 53 --~~~~~~-------------------~~~~~~~-~~v~~~i~~~~~~~~~~g~~~-~g~~i~i~s~iP~~g~k~GLgSS 109 (337)
T 2pg9_A 53 --FDFAVD-------------------LRPNPDY-SLIQETIALMGDFLAVRGQNL-RPFSLAIYGKMEREGKKFGLGSS 109 (337)
T ss_dssp --SSSCBC-------------------SSCCTTT-HHHHHHHHHHHHHHHHTTCCC-CCEEEEEECCSEETTEECSSCHH
T ss_pred --CCceee-------------------ecCCCCc-HHHHHHHHHHHHHHHhcCCCC-CCEEEEEEccCCCCCCCccccHH
Confidence 100110 0123467 8999988876543 35555 79999999999999 999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeec------------------
Q 002206 650 ASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQ------------------ 711 (953)
Q Consensus 650 AA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~------------------ 711 (953)
||++||++.|++.+++.++++++++++|+.+|+. .|.++|.+|+++|++||......++..
T Consensus 110 aa~~va~~~al~~~~~~~l~~~~l~~la~~~E~~-~~~~~~~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (337)
T 2pg9_A 110 GSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLK-RGDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERD 188 (337)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH-TTCCSCSHHHHHHHHTSCEEEECCCHHHHHHHHHHSCHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH-hCCCCCHHHHHHHHhCCEEEEecCChHHhhhhhcccchhhhcccc
Confidence 9999999999999999999999999999999965 566666699999999996332211221
Q ss_pred -CccceeeeecCCCeEEEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHH
Q 002206 712 -PAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEA 790 (953)
Q Consensus 712 -~~~~~~~~~~p~~~~~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 790 (953)
+..+ +++++|++++|++++|+++++|.. +++.+..
T Consensus 189 ~~~~~-~~l~~~~~~~lvl~~~~~~~~T~~---------------~~~~~~~---------------------------- 224 (337)
T 2pg9_A 189 WGFSI-SQVKPTLECDFLVGWTKEVAVSSH---------------MVQQIKQ---------------------------- 224 (337)
T ss_dssp CCCEE-EECCCCSCCEEEEEECCCCCCHHH---------------HHHHHGG----------------------------
T ss_pred cccce-eeecCCCCceEEEEECCCccchHH---------------HHHHHHH----------------------------
Confidence 1123 566777789999999999988641 2222110
Q ss_pred hhhhhHHhcCChhHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccc-hhhhHHHHHHHHHccC
Q 002206 791 EASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIY-ENFRVKAFKALLTAAA 869 (953)
Q Consensus 791 ~~~~~~l~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~-E~~Rv~~~~~~l~~~~ 869 (953)
.+ . + +.+. -+.++.++.++|+++
T Consensus 225 ------~~--~-~----------------------------------------------~~~~~~~~~~~~~~~aL~~~- 248 (337)
T 2pg9_A 225 ------NI--N-Q----------------------------------------------NFLTSSKETVVSLVEALEQG- 248 (337)
T ss_dssp ------GC--C-H----------------------------------------------HHHHHHHHHHHHHHHHHHHT-
T ss_pred ------HH--H-H----------------------------------------------HHHHHHHHHHHHHHHHHHcC-
Confidence 00 0 0 0011 134677899999986
Q ss_pred ChHHHHHHHHHHHHhhhhhhhcC--CCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 870 SDDQLTSLGELLYQCHYSYSACG--LGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 870 ~~~~~~~lG~lm~~sh~sl~~~~--vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|++.||++|+++|.++++++ +++|++|+|++.+++ .|++ +||||||+|||+++|.++
T Consensus 249 ---d~~~lg~~m~~~~~~l~~l~~~v~~p~l~~l~~~a~~-----------~Ga~-ak~sGaGgGg~vial~~~ 307 (337)
T 2pg9_A 249 ---KSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQD-----------LQAV-AKSSGAGGGDCGIALSFD 307 (337)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTTTT-----------SSEE-EEECTTCSSSEEEEEECS
T ss_pred ---CHHHHHHHHHHHHHHHHHhcCcCCCHHHHHHHHHHHH-----------CCCE-EEEeCCCCccEEEEEECC
Confidence 89999999999999999986 999999999999886 5889 999999999999988765
No 11
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei}
Probab=100.00 E-value=8.7e-36 Score=331.27 Aligned_cols=281 Identities=21% Similarity=0.282 Sum_probs=207.2
Q ss_pred CCceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCC
Q 002206 494 EEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 573 (953)
Q Consensus 494 ~~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 573 (953)
.+.++.++|||||||+|||+||+|+.+|++||++++++.++++++ + ++.+.+
T Consensus 18 ~~~mi~~~APgkinL~GeH~~~~Gg~~l~~aI~~~~~v~v~~~~~--i---------------------~i~~~~----- 69 (321)
T 4hac_A 18 GSHMVSCSAPGKIYLFGEHAVVYGETAIACAVELRTRVRAELNDS--I---------------------TIQSQI----- 69 (321)
T ss_dssp SCCCEEEEEEEEEEEECTTTGGGTCCEEEEEEEEEEEEEEEECSS--E---------------------EEEETT-----
T ss_pred CCCEEEEEeeEEEEEEccCEEEcCCEEEEEEeccCEEEEEEECCC--E---------------------EEEECC-----
Confidence 456789999999999999999999999999999999999997542 3 232210
Q ss_pred CCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHH
Q 002206 574 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 653 (953)
Q Consensus 574 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~ 653 (953)
+.-.++ ....+|.+|+..+ +++++ .. +|++|.+.++||.++|||||||++
T Consensus 70 ----~~~~~~--------------------~~~~~~~~~~~~~----l~~~~-~~-~g~~i~i~~~iP~g~GLGSSsa~~ 119 (321)
T 4hac_A 70 ----GRTGLD--------------------FEKHPYVSAVIEK----MRKSI-PI-NGVFLTVDSDIPVGSGLGSSAAVT 119 (321)
T ss_dssp ----EEESSC--------------------TTTSHHHHHHHHH----HTTTS-CC-CCEEEEEEECCCSCTTCCHHHHHH
T ss_pred ----CCcccc--------------------cchhHHHHHHHHH----HHHhC-CC-CCEEEEEECCCCCCCCccHHHHHH
Confidence 000000 0113555555443 34445 23 799999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCC
Q 002206 654 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 733 (953)
Q Consensus 654 va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsg 733 (953)
+|++.|++.+++.++++++++++|+.+|+.++|.++| +|++++++|| ++++ . . . +.+++| ++++++++++
T Consensus 120 va~~~al~~l~~~~l~~~~l~~la~~~e~~~~g~~~~-~D~~~~~~Gg---~~~~-~-~--~-~~l~~p-~~~~vlv~p~ 189 (321)
T 4hac_A 120 IASIGALNELFGFGLSLQEIAKLGHEIEIKVQGAASP-TDTYVSTFGG---VVTI-P-E--R-RKLKTP-DCGIVIGDTG 189 (321)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHSCCCS-HHHHHHHHCS---EEEE-T-T--C-CEECCC-CCEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCcH-HHHHHHHcCC---eEEE-c-C--C-ceeccC-CCEEEEEECC
Confidence 9999999999999999999999999999999999655 8999999999 4444 2 2 1 344566 8999999999
Q ss_pred CccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcC
Q 002206 734 IRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNI 813 (953)
Q Consensus 734 v~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l 813 (953)
++++|.. +++.+ + .+++..|+.++..
T Consensus 190 ~~~sT~~---------------~~~~~-------------------------~---------~l~~~~~~~~~~~----- 215 (321)
T 4hac_A 190 VFSSTKE---------------LVANV-------------------------R---------QLRESYPDLIEPL----- 215 (321)
T ss_dssp CCCCHHH---------------HHHHH-------------------------H---------HHHHHCHHHHHHH-----
T ss_pred CCccHHH---------------HHHHH-------------------------H---------HHHhcCHHHHHHH-----
Confidence 9998742 11111 0 0111111111110
Q ss_pred CccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCC
Q 002206 814 PESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGL 893 (953)
Q Consensus 814 p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~v 893 (953)
.+.+ ...+.++.++|+++ |++.||++|+++|..++++++
T Consensus 216 -----------------------------------~~~~--~~~~~~~~~al~~~----d~~~lg~~~~~~~~~~~~~~v 254 (321)
T 4hac_A 216 -----------------------------------MTSI--GKISRIGEQLVLSG----DYASIGRLMNVNQGLLDALGV 254 (321)
T ss_dssp -----------------------------------HHHH--HHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHHTC
T ss_pred -----------------------------------HHHH--HHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHhhcCC
Confidence 0000 01255678888885 999999999999988888999
Q ss_pred CCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEec-cCChhhhhh
Q 002206 894 GSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIG-RNSLRSSEQ 948 (953)
Q Consensus 894 s~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~-~~~~~~~~~ 948 (953)
++|++|++++.+++ .|++|+||||+|+|||+++|. ++..++.++
T Consensus 255 ~~p~l~~l~~~a~~-----------~Ga~ga~~SGaG~GG~v~al~~~~~a~~~~~ 299 (321)
T 4hac_A 255 NILELSQLIYSARA-----------AGAFGAKITGAGGGGCMVALTAPEKCNQVAE 299 (321)
T ss_dssp CCHHHHHHHHHHHH-----------TTCSEEEECSSCSSSEEEEEECSTTHHHHHH
T ss_pred CCHHHHHHHHHHHH-----------CCCCEEEECccCCCCEEEEEcCHHHHHHHHH
Confidence 99999999999998 689999999999999998886 333444433
No 12
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus}
Probab=100.00 E-value=5.9e-36 Score=331.69 Aligned_cols=276 Identities=18% Similarity=0.286 Sum_probs=209.9
Q ss_pred eEEEEcCcceeccccccccCCCeeeccccccc-eEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCC
Q 002206 497 IFVARAPGRLDVMGGIADYSGSLVLQMPIREA-CHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 575 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~-~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 575 (953)
...++|||||||+|||+||+|+.+|+++|++. +++.++++++++ .+.+.+..
T Consensus 6 ~~~~~APgkinL~Ge~~d~~g~~~l~~ai~~~~~~v~v~~~~~~~--------------------~i~~~~~~------- 58 (308)
T 2x7i_A 6 KGYGESTGKIILIGEHAVTFGEPAIAVPFNAGKIKVLIEALESGN--------------------YSSIKSDV------- 58 (308)
T ss_dssp EEEEEEEEEEEEEEBTTCCTTSCEEEEEEEEEEEEEEEEECCTTC--------------------CCEEEEEE-------
T ss_pred ceEEEEeeEEEEEecCeeecCCeEEEEEEcCCEEEEEEEECCCCC--------------------eeEEEecC-------
Confidence 46789999999999999999999999999985 889999876532 02222110
Q ss_pred CceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHH
Q 002206 576 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVA 655 (953)
Q Consensus 576 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va 655 (953)
++.+++ ....|.+|+.+++..+.+ .. .|++|.++++||.++|||||||+++|
T Consensus 59 --~~~~~~---------------------~~~~~~~~v~~~~~~~~~----~~-~g~~i~i~~~iP~g~GLGSSsa~~~a 110 (308)
T 2x7i_A 59 --YDGMLY---------------------DAPDHLKSLVNRFVELNN----IT-EPLAVTIQTNLPPSRGLGSSAAVAVA 110 (308)
T ss_dssp --CSSCCC---------------------CTTSCHHHHHHHHHHHTT----CC-SCEEEEEEECCCTTSSSCHHHHHHHH
T ss_pred --CCCChh---------------------hhhHHHHHHHHHHHHHHh----hC-CCeEEEEeccCCCCCCccHHHHHHHH
Confidence 000110 013689999988765432 23 58999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCc
Q 002206 656 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIR 735 (953)
Q Consensus 656 ~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~ 735 (953)
++.|++.+++.++++++++++|+.+|+.++|.|||. |+.++.+|+. ++++ +.... ++++++.++.+++++++++
T Consensus 111 ~~~al~~l~~~~l~~~~l~~la~~~E~~~~g~~sG~-d~~~~~~g~~---~~~~-~g~~~-~~~~~~~~~~~vi~~~~~~ 184 (308)
T 2x7i_A 111 FVRASYDFLGKSLTKEELIEKANWAEQIAHGKPSGI-DTQTIVSGKP---VWFQ-KGHAE-TLKTLSLDGYMVVIDTGVK 184 (308)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHHHHHSSCCHH-HHHHHHHTSC---EEEE-TTEEE-ECSCCCBSSEEEEEECCC-
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHCCCCchH-HHHHhhCCce---EEEE-cCCCc-eEeccCCCceEEEEECcCC
Confidence 999999999999999999999999999999999996 9999999884 5555 33222 5666666889999999999
Q ss_pred cccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCc
Q 002206 736 HSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPE 815 (953)
Q Consensus 736 ~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~ 815 (953)
++|... |+. +.. ..... |+
T Consensus 185 ~sT~~~-~~~-----------l~~-------------------------------------~~~~~------------~~ 203 (308)
T 2x7i_A 185 GSTRQA-VHD-----------VHK-------------------------------------LCEDP------------QY 203 (308)
T ss_dssp -CCSCC-CC--------------------------------------------------------C------------CH
T ss_pred CCHHHH-HHH-----------HHH-------------------------------------HHhcC------------ch
Confidence 887531 110 000 00000 00
Q ss_pred cchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCCCC
Q 002206 816 SIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGS 895 (953)
Q Consensus 816 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs~ 895 (953)
.++ ..|+ ..++.++.++|+++ |++.||++|+++|.+++++++++
T Consensus 204 ----------------------------~~~-~~~~---~~~~~~~~~al~~~----d~~~l~~~~~~~~~~~~~~~~~~ 247 (308)
T 2x7i_A 204 ----------------------------MSH-VKHI---GKLVLRASDVIEHH----KFEALADIFNECHADLKALTVSH 247 (308)
T ss_dssp ----------------------------HHH-HHHH---HHHHHHHHHHHHTT----CHHHHHHHHHHHHHHHHHHSCCC
T ss_pred ----------------------------HHH-HHHH---HHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHhCCCC
Confidence 000 1121 23677888999885 89999999999999999999999
Q ss_pred chHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 896 DGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 896 ~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|++|++++.+++ .|++|+||||+|+|||+++|.++
T Consensus 248 p~l~~l~~~~~~-----------~Ga~ga~~sGaG~GG~v~~l~~~ 282 (308)
T 2x7i_A 248 DKIEQLMKIGKE-----------NGAIAGKLTGAGRGGSMLLLAKD 282 (308)
T ss_dssp HHHHHHHHHHHH-----------TTCSEEEESBTTTCSSEEEEESS
T ss_pred HHHHHHHHHHHH-----------CCCcEEEeeccCCCcEEEEEeCC
Confidence 999999999998 68999999999999999988765
No 13
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A*
Probab=100.00 E-value=1.1e-34 Score=324.82 Aligned_cols=287 Identities=19% Similarity=0.234 Sum_probs=214.6
Q ss_pred CceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCC
Q 002206 495 EEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNR 574 (953)
Q Consensus 495 ~~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~ 574 (953)
++.+.++|||||+|+|||+||+|+.+|.++|++++++.++++++. +.+.+.+..
T Consensus 11 ~~~~~~~ApgKi~L~Geh~~~~G~~~l~~ai~~~~~v~v~~~~~~--------------------~~~~~~~~~------ 64 (332)
T 2hfs_A 11 KTTGKNIGYGKVILFGEHFVVHGAEAIVAGISEYTECRLEINPGV--------------------PGLQVDDQR------ 64 (332)
T ss_dssp BCCSCCEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEEETTC--------------------CSEEEEECC------
T ss_pred CCeEEEEEeEEEEEecCCEEEcCCeEEEEEecccEEEEEEEcCCC--------------------CCeEEEecC------
Confidence 456788999999999999999999999999999999999876421 112222110
Q ss_pred CCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCC-CCCEEEEEEeCCCCCCCCchHHHHH
Q 002206 575 GPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF-EDSISMLVSSAVPEGKGVSSSASVE 653 (953)
Q Consensus 575 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~-~~g~~i~i~s~iP~g~GLgSSAA~~ 653 (953)
..++ ... ....|.+..++..+++..+... ..|++|.+.++||.++|||||||++
T Consensus 65 ---~~~~----------~~~------------~~~~~~~~~a~~~~~~~~g~~~~~~g~~i~i~~~iP~g~GLGSSsA~~ 119 (332)
T 2hfs_A 65 ---PAIP----------GYI------------AQKRDEQIKAHQLVLDHLKVDLSGDGLKMFIGGPLVPSSGIGASASDV 119 (332)
T ss_dssp ---CCCT----------THH------------HHHHHHHHHHHHHHHHHTTBCCSSSEEEEEEECSCCCCTTSCHHHHHH
T ss_pred ---cccc----------ccc------------cccchhHHHHHHHHHHHcCCccCCCceEEEEEcCCCCCCCccHHHHHH
Confidence 0000 000 0124555556666667777542 1589999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCcc-ceeeeecCCCeEEEEEeC
Q 002206 654 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE-LLGVVEIPSHIRFWGIDS 732 (953)
Q Consensus 654 va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~-~~~~~~~p~~~~~vl~ds 732 (953)
+|++.|++.+++.++++++++++|+.+|+.+||.|+|. |+.++++|| ++++...... ..+++++|++++++++++
T Consensus 120 ~a~~~al~~l~~~~l~~~~l~~~a~~~E~~~~G~~~G~-D~~~~~~Gg---~~~~~~~~g~~~~~~~~~~~~~~~vl~~~ 195 (332)
T 2hfs_A 120 VAFSRALSELYQLNLTDEEVNLSAFVGEGGYHGTPSGA-DNTAATYGG---LILYRRQNGKSVFKPIAFQQRLYLVVVGT 195 (332)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHGGGSSSCCCSH-HHHHHHHCE---EEEEEECSSSEEEEEECCCSCEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCcH-hHHHHhcCC---eEEEecCCCCcceeeecCCCCcEEEEEEC
Confidence 99999999999999999999999999999999999997 999999999 4444433322 235677777899999999
Q ss_pred CCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhc
Q 002206 733 GIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKN 812 (953)
Q Consensus 733 gv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 812 (953)
+++++|.. ++.++. .+++..++.++.
T Consensus 196 ~~~~~T~~---------------~~~~~~----------------------------------~~~~~~~~~~~~----- 221 (332)
T 2hfs_A 196 GINASTAK---------------VVNDVH----------------------------------KMKQQQPVQFKR----- 221 (332)
T ss_dssp SCCCCHHH---------------HHHHHH----------------------------------HHHHHCHHHHHH-----
T ss_pred CCCccHHH---------------HHHHHH----------------------------------HHHHhCHHHHHH-----
Confidence 99988741 121110 011111111111
Q ss_pred CCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcC
Q 002206 813 IPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACG 892 (953)
Q Consensus 813 lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~ 892 (953)
+++++. .++.++.++|+++ |++.||++|+++|..++.++
T Consensus 222 -------------------------------~~~~~~------~~~~~~~~al~~~----d~~~l~~~~~~~~~~l~~~~ 260 (332)
T 2hfs_A 222 -------------------------------LYDNYT------HIVSQAREALQKG----DLQRLGQLMNANHDLCRQID 260 (332)
T ss_dssp -------------------------------HHHHHH------HHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------HHHHHH------HHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHcC
Confidence 011121 2456778888885 89999999999999999999
Q ss_pred CCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccCC
Q 002206 893 LGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNS 942 (953)
Q Consensus 893 vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~~ 942 (953)
+++|++|++++.+++ .|++|+||||+|+|||+++|.++.
T Consensus 261 ~~~p~l~~l~~~~~~-----------~Ga~ga~~sGaG~gg~v~~l~~~~ 299 (332)
T 2hfs_A 261 VSCRELESIVQTCRT-----------YGALGAKLSGTGRGGIAVALAASS 299 (332)
T ss_dssp CCCHHHHHHHHHHHH-----------TTCSEEEEESSCSSSEEEEEESSH
T ss_pred CCCHHHHHHHHHHHH-----------cCCceEEeccCCCCcEEEEEecCc
Confidence 999999999999998 689999999999999999887653
No 14
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A
Probab=100.00 E-value=2.2e-34 Score=320.39 Aligned_cols=282 Identities=16% Similarity=0.231 Sum_probs=202.8
Q ss_pred ceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCC
Q 002206 496 EIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 575 (953)
Q Consensus 496 ~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 575 (953)
+.+.++|||||+|+|||+||+|+.+|++||++++++.++++++..+ ++.+.+. +
T Consensus 4 ~~~~~~APgki~L~geh~~~~G~~~l~~ai~~~~~v~v~~~~~~~i---------------------~i~~~~~---~-- 57 (317)
T 1kkh_A 4 SHMIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEI---------------------ILNLNDL---N-- 57 (317)
T ss_dssp CCEEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEECCSSEE---------------------EEEETTT---T--
T ss_pred CCEEEEccEEEEEEcCCeeEcCCEEEEEEecCeEEEEEEECCCCeE---------------------EEEeCCC---C--
Confidence 4578999999999999999999999999999999999998765433 3322110 0
Q ss_pred CceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHH---HHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 576 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLM---TELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 576 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l---~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
...++++.+.. + .....| +++..++..+. +.++.....|++|.+.++||.++|||||||+
T Consensus 58 ~~~~~~~~~~~----~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~i~i~~~iP~~~GLGsSsa~ 120 (317)
T 1kkh_A 58 KSLGLNLNEIK----N------------INPNNF-GDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASI 120 (317)
T ss_dssp EEEEEETTTGG----G------------CCGGGS-GGGHHHHHHHHHHHHHTTCCCCSCEEEEEEECSCSSSSSCHHHHH
T ss_pred CceEEEeccCC----c------------cCcccc-hHHHHHHHHHHHHHHhhcccCCCCeEEEEecCCCCCCCchHHHHH
Confidence 01122221100 0 112355 55555544332 2234332369999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecC--C----CeE
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP--S----HIR 726 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p--~----~~~ 726 (953)
++|++.|++.+++.++++++++++|+.+|+.+||.+|| +|++++++||. +++ ++... ++++++ + ++.
T Consensus 121 ~~a~~~al~~l~~~~l~~~~l~~~a~~~E~~~~g~~sg-~D~~~~~~Gg~---~~~--~~~~~-~~~~~~~~~~l~~~~~ 193 (317)
T 1kkh_A 121 TIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASI-TDTSTITYKGI---LEI--KNNKF-RKIKGEFEEFLKNCKF 193 (317)
T ss_dssp HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHSSSCCS-HHHHHHHHCSE---EEE--SSSCE-EEECHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCch-HHHHHHHhCCe---EEE--cCCCc-eEecCCcccccccCcE
Confidence 99999999999999999999999999999999999988 79999999984 344 33333 455442 1 258
Q ss_pred EEEEeCCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHH
Q 002206 727 FWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFE 806 (953)
Q Consensus 727 ~vl~dsgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 806 (953)
+++++++++++|.. +++.+. .++.. ++
T Consensus 194 ~vl~~~~~~~~T~~---------------~~~~~~----------------------------------~~~~~-~~--- 220 (317)
T 1kkh_A 194 LIVYAEKRKKKTAE---------------LVNEVA----------------------------------KIENK-DE--- 220 (317)
T ss_dssp EEEEEECCCSCHHH---------------HHHHHH----------------------------------TCTTH-HH---
T ss_pred EEEEECCCcCcHHH---------------HHHHHH----------------------------------Hhhcc-HH---
Confidence 99999999988641 111110 00000 00
Q ss_pred HHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhh
Q 002206 807 ALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHY 886 (953)
Q Consensus 807 ~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~ 886 (953)
.+.+..+ ...++++.+ |++.||++|+++|.
T Consensus 221 --------------------------------------------~~~~~~~--~~~~a~~~~----d~~~l~~~~~~~~~ 250 (317)
T 1kkh_A 221 --------------------------------------------IFKEIDK--VIDEALKIK----NKEDFGKLMTKNHE 250 (317)
T ss_dssp --------------------------------------------HHHHHHH--HHHHHHHCC----SHHHHHHHHHHHHH
T ss_pred --------------------------------------------HHHHHHH--HHHHHHHcC----CHHHHHHHHHHHHH
Confidence 0011111 133456664 89999999999999
Q ss_pred hhhhcCCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccCC
Q 002206 887 SYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNS 942 (953)
Q Consensus 887 sl~~~~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~~ 942 (953)
+++++++++|++|++++.+++ .| +|+||||+|+|||+++|.++.
T Consensus 251 ~~~~~~~~~p~l~~~~~~~~~-----------~G-~ga~~sGaG~GG~v~~l~~~~ 294 (317)
T 1kkh_A 251 LLKKLNISTPKLDRIVDIGNR-----------FG-FGAKLTGAGGGGCVIILVNEE 294 (317)
T ss_dssp HHHTTTCCCHHHHHHHHHHHH-----------HS-SEEEECSSSSSEEEEEECCGG
T ss_pred HHHhcCCCCHHHHHHHHHHHh-----------cC-ceeEEeecCCCCEEEEEechh
Confidence 999999999999999999987 58 999999999999999886643
No 15
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae}
Probab=100.00 E-value=5.6e-33 Score=305.36 Aligned_cols=263 Identities=21% Similarity=0.274 Sum_probs=193.3
Q ss_pred eEEEEcCcceeccccccccCCCeeecccc-ccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCC
Q 002206 497 IFVARAPGRLDVMGGIADYSGSLVLQMPI-REACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 575 (953)
Q Consensus 497 ~~~~~APGrv~l~GeH~d~~g~~vl~~aI-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 575 (953)
++.++|||||+|+|||+||+|+.+|.+|| ++++++.+++++ +++++
T Consensus 5 ~~~~~aP~ki~L~Ge~~~~~g~~~l~~ai~~~~~~v~v~~~~-~~~~i-------------------------------- 51 (292)
T 2oi2_A 5 VGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAE-SPWRL-------------------------------- 51 (292)
T ss_dssp CEEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEEECS-SCCCC--------------------------------
T ss_pred cEEEEeeeEEEEEeCCeeecCCcEEEEEEcCcEEEEEEEECC-CceEE--------------------------------
Confidence 46789999999999999999999999999 999999998763 21111
Q ss_pred CceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHH
Q 002206 576 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVA 655 (953)
Q Consensus 576 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va 655 (953)
... ...|.+..+...+ .+... .|++|.+.++||.++|||||||.++|
T Consensus 52 -----~~~------------------------~~~~~~~~~~~~~---~~~~~-~g~~i~i~~~iP~g~GLGSSsa~~~a 98 (292)
T 2oi2_A 52 -----YEE------------------------DTLSMAVYASLEY---LNITE-ACIRCEIDSAIPEKRGMGSSAAISIA 98 (292)
T ss_dssp -----CCC------------------------SHHHHHHHHHHHH---HTCSC-CCEEEEEC----CCGGGSCHHHHHHH
T ss_pred -----Eec------------------------CccchhhhhhHHH---hcccC-CceEEEEEecCCCCCCchHHHHHHHH
Confidence 000 0012222222211 25433 69999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCc
Q 002206 656 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIR 735 (953)
Q Consensus 656 ~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~ 735 (953)
++.|++.++|.++++++++++|..+|+..+|+|||+ |++++++||. +++ ++.... ++++++....+++++++++
T Consensus 99 ~~~al~~~~~~~l~~~~l~~la~~~E~~~~~~p~g~-d~~~~~~gg~---~~~-~~~~~~-~~~~~~~~~~~~i~~~~~~ 172 (292)
T 2oi2_A 99 AIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGL-DAKTCLSDQP---IRF-IKNVGF-TELEMDLSAYLVIADTGVY 172 (292)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHHHTTCCCCSH-HHHHHTCSSC---EEE-ETTTEE-EECCCCCSCEEEEEECSSC
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCch-hHHHHhcCce---EEE-EcCCCc-eeecCCCCCEEEEEECCCC
Confidence 999999999999999999999999999889999995 9999999984 444 333222 4555442333899999998
Q ss_pred cccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCc
Q 002206 736 HSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPE 815 (953)
Q Consensus 736 ~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~ 815 (953)
++|.. +.+.+. +. .+
T Consensus 173 ~sT~~---------------~~~~l~-------------------------------------~~------------~~- 187 (292)
T 2oi2_A 173 GHTRE---------------AIQVVQ-------------------------------------NK------------GK- 187 (292)
T ss_dssp CCHHH---------------HHHHHH-------------------------------------HT------------GG-
T ss_pred CcHHH---------------HHHHHH-------------------------------------HH------------Hh-
Confidence 88742 111110 00 00
Q ss_pred cchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhcCCCC
Q 002206 816 SIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGS 895 (953)
Q Consensus 816 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~~vs~ 895 (953)
..++..|.+.| .+.++.++|+++ |++.||++|+++|.+++++++++
T Consensus 188 ----------------------------~~~~~~~~~~~--~~~~~~~al~~~----d~~~l~~~~~~~~~~l~~~~~~~ 233 (292)
T 2oi2_A 188 ----------------------------DALPFLHALGE--LTQQAEIAISQK----DAEGLGQILSQAHLHLKEIGVSS 233 (292)
T ss_dssp ----------------------------GGHHHHHHHHH--HHHHHHHHHHTT----CHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ----------------------------hhHHHHHHHHH--HHHHHHHHHHcC----CHHHHHHHHHHHHHHHHhcCCCc
Confidence 00001111111 355778888885 89999999999999999999999
Q ss_pred chHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 896 DGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 896 ~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
|++|++++.+++ .|++|+||||+|+|||+++|.++
T Consensus 234 p~l~~l~~~~~~-----------~Ga~ga~~sGaG~Gg~v~~l~~~ 268 (292)
T 2oi2_A 234 LEADSLVETALS-----------HGALGAKMSGGGLGGCIIALVTN 268 (292)
T ss_dssp HHHHHHHHHHHT-----------TTCSEEEEESSSSSSEEEEEESC
T ss_pred HHHHHHHHHHHh-----------CCCceeeeccCCCCcEEEEEecC
Confidence 999999999987 68999999999999999988765
No 16
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A*
Probab=99.95 E-value=8.5e-28 Score=264.56 Aligned_cols=260 Identities=15% Similarity=0.154 Sum_probs=195.3
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccc-eEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCC
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREA-CHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGP 576 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~-~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~ 576 (953)
+.++||+|++.+|+|.| ++++++|.+ ..+.+++++++. +.+..
T Consensus 3 i~v~aPaki~nlG~g~~-----vl~~a~d~~~~~~~~~~~~~~~---------------------~~i~~---------- 46 (296)
T 1h72_C 3 VRVKAPCTSANLGVGFD-----VFGLCLKEPYDVIEVEAIDDKE---------------------IIIEV---------- 46 (296)
T ss_dssp EEEEEEEEEECTGGGTT-----TEEEEEEEEEEEEEEEEESSSS---------------------EEEEE----------
T ss_pred EEEEEEeehhccccchh-----hhHHhcccccEEEEEEecCCCe---------------------EEEEE----------
Confidence 67899999999998766 889999984 445555554321 22211
Q ss_pred ceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHH
Q 002206 577 TFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVAS 656 (953)
Q Consensus 577 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~ 656 (953)
+-.+ .+...|.||+..++..+.+..|.+ .|++|.++++||.|+|||||||.++|+
T Consensus 47 ----~~~~-------------------~~~~~~~n~v~~a~~~~~~~~g~~--~g~~i~i~~~iP~g~GLGSSsa~~~a~ 101 (296)
T 1h72_C 47 ----DDKN-------------------IPTDPDKNVAGIVAKKMIDDFNIG--KGVKITIKKGVKAGSGLGSSAASSAGT 101 (296)
T ss_dssp ----SCTT-------------------SCCCTTTSHHHHHHHHHHHHTTCC--CEEEEEEECSSCTTSSSCHHHHHHHHH
T ss_pred ----cCCc-------------------CCCCCccCcHHHHHHHHHHHhCCC--CCeEEEEEcCCCCCCCccHHHHHHHHH
Confidence 0000 111237899999888877667764 699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeCCCcc
Q 002206 657 MSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRH 736 (953)
Q Consensus 657 ~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~dsgv~~ 736 (953)
+.|++.++|.++++++++++|..+|..++|+|++ .|..++++||. +++.++.+... +++++|+++++++++++++.
T Consensus 102 ~~al~~l~~~~l~~~~l~~la~~~e~~~~g~~~~-ddv~~~~~gg~--~~~~~~~~~~~-~~~~~~~~~~~vl~~p~~~~ 177 (296)
T 1h72_C 102 AYAINELFKLNLDKLKLVDYASYGELASSGAKHA-DNVAPAIFGGF--TMVTNYEPLEV-LHIPIDFKLDILIAIPNISI 177 (296)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHHHSSCCC-TTHHHHHHCSE--EEEEETTTTEE-EEECCCSCCCEEEECCSSCC
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhcCcccCCCCc-cchHHHHhCCE--EEEEeCCceEE-EEEcCCCCeEEEEEeCCCCc
Confidence 9999999999999999999999999999999986 25556899994 22333333223 67777778999999998865
Q ss_pred ccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCcc
Q 002206 737 SVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPES 816 (953)
Q Consensus 737 ~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~ 816 (953)
+|.. +. +.+++.
T Consensus 178 ~T~~---------------~~-----------------------------------------------------~~l~~~ 189 (296)
T 1h72_C 178 NTKE---------------AR-----------------------------------------------------EILPKA 189 (296)
T ss_dssp CHHH---------------HH-----------------------------------------------------HTSCSC
T ss_pred cHHH---------------HH-----------------------------------------------------HhccCc
Confidence 5421 00 011110
Q ss_pred chhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHH--HHhhhhhhhcCCC
Q 002206 817 IVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELL--YQCHYSYSACGLG 894 (953)
Q Consensus 817 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm--~~sh~sl~~~~vs 894 (953)
.+..|.+.+..|+.++.++|+++ |++.||++| |+.|+.++. ++
T Consensus 190 -----------------------------~~~~~~~~~~~~~~~~~~al~~~----d~~~~~~~~~~n~~h~~~~~--~~ 234 (296)
T 1h72_C 190 -----------------------------VGLKDLVNNVGKACGMVYALYNK----DKSLFGRYMMSDKVIEPVRG--KL 234 (296)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHHHHHHHTT----CHHHHHHHHTTCCSSHHHHH--TT
T ss_pred -----------------------------CcHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHhcCcchhhhhh--cc
Confidence 02346666777888899999885 899999999 778888886 48
Q ss_pred CchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEec
Q 002206 895 SDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIG 939 (953)
Q Consensus 895 ~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~ 939 (953)
+|++|++++.+++ . ++|+||||+|+ |+++|.
T Consensus 235 ~p~l~~~~~~~~~-----------~-a~ga~~sGsG~--~v~~l~ 265 (296)
T 1h72_C 235 IPNYFKIKEEVKD-----------K-VYGITISGSGP--SIIAFP 265 (296)
T ss_dssp STTHHHHHHHHTT-----------T-EEEEEECTTSS--CEEEEE
T ss_pred CccHHHHHHHHHh-----------h-cceEEEecCCh--heEEEe
Confidence 9999999999886 5 68999999996 776665
No 17
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.95 E-value=1.9e-27 Score=272.32 Aligned_cols=338 Identities=16% Similarity=0.079 Sum_probs=188.2
Q ss_pred ceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcc---cc-cccccC--
Q 002206 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAV---QA-DALTVD-- 87 (953)
Q Consensus 14 ~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~---~~-~~~~~~-- 87 (953)
+.|+||| ++.++.||++|+++||++|++|||+|+|+++... ..... .++.+.+...+.... .. ......
T Consensus 21 ~~MRIL~-~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~---~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (400)
T 4amg_A 21 QSMRALF-ITSPGLSHILPTVPLAQALRALGHEVRYATGGDI---RAVAE-AGLCAVDVSPGVNYAKLFVPDDTDVTDPM 95 (400)
T ss_dssp CCCEEEE-ECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSST---HHHHT-TTCEEEESSTTCCSHHHHSCCC-------
T ss_pred CCCeEEE-ECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcch---hhHHh-cCCeeEecCCchhHhhhcccccccccccc
Confidence 4467775 4778999999999999999999999999987431 11010 111111110011000 00 000000
Q ss_pred --hHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHHHHHhhhcc
Q 002206 88 --RLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAEYVMAAGH 162 (953)
Q Consensus 88 --~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~~~~~~~~~ 162 (953)
.......+...+............+.+++++||+||+|. .+++..+|+.+|+|.+.+...... +.+.......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~~~~-- 173 (400)
T 4amg_A 96 HSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALIRRA-- 173 (400)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHHHHH--
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHHHHH--
Confidence 000001111111111222344556677889999999996 778888999999999887432111 1111111100
Q ss_pred chHHHHHHHHhh-ccccceEEec-CC--CCCCC---CCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCc
Q 002206 163 HHRSIVWQIAED-YSHCEFLIRL-PG--YCPMP---AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPA 235 (953)
Q Consensus 163 ~~~~~~~~l~~~-~~~~~~l~~~-~~--~~~~p---~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~ 235 (953)
+.....+.... .......+.. +. ....| ..+.......... ..+....++++..+++++|||++||...
T Consensus 174 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~v~vs~Gs~~~ 249 (400)
T 4amg_A 174 -MSKDYERHGVTGEPTGSVRLTTTPPSVEALLPEDRRSPGAWPMRYVPY---NGGAVLPDWLPPAAGRRRIAVTLGSIDA 249 (400)
T ss_dssp -THHHHHHTTCCCCCSCEEEEECCCHHHHHTSCGGGCCTTCEECCCCCC---CCCEECCTTCSCCTTCCEEEECCCSCC-
T ss_pred -HHHHHHHhCCCcccccchhhcccCchhhccCcccccCCcccCcccccc---cccccCcccccccCCCcEEEEeCCcccc
Confidence 00111110000 0000111100 00 00000 0111111111000 0011112355556678899999999764
Q ss_pred h-------HhHHHhhCCCCcEEEEe-CCCCC----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 002206 236 G-------WKLKEEYLPSGWKCLVC-GASDS----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (953)
Q Consensus 236 ~-------~~ll~~ll~~~~~~vv~-G~~~~----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l 303 (953)
. ..+...+...++.+++. +.... .+|+|+++.+|.+ +.++|+++|+||||||+||++|++++|||+|
T Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p-~~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v 328 (400)
T 4amg_A 250 LSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIP-LGALLETCDAIIHHGGSGTLLTALAAGVPQC 328 (400)
T ss_dssp -CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCC-HHHHHTTCSEEEECCCHHHHHHHHHHTCCEE
T ss_pred cCccHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecC-HHHHhhhhhheeccCCccHHHHHHHhCCCEE
Confidence 2 12334454455655544 33221 2789999976654 4599999999999999999999999999999
Q ss_pred EEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc----------CCCCHHHHHHHHHHHH
Q 002206 304 FVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE----------GGINGGEVAAHILQET 370 (953)
Q Consensus 304 ~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~----------~~~~g~~~~A~~i~~~ 370 (953)
++| .+.||+.||+++++.|+|+.++..+++ .++|+++|+|+. |+ ...+|+.++|+.|+++
T Consensus 329 ~~P--~~~dQ~~na~~v~~~G~g~~l~~~~~~----~~al~~lL~d~~-~r~~a~~l~~~~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 329 VIP--HGSYQDTNRDVLTGLGIGFDAEAGSLG----AEQCRRLLDDAG-LREAALRVRQEMSEMPPPAETAAXLVAL 398 (400)
T ss_dssp ECC--C---CHHHHHHHHHHTSEEECCTTTCS----HHHHHHHHHCHH-HHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred Eec--CcccHHHHHHHHHHCCCEEEcCCCCch----HHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 999 678999999999999999999988876 457778888763 32 2445777777777764
No 18
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=3e-26 Score=259.79 Aligned_cols=325 Identities=14% Similarity=0.022 Sum_probs=199.7
Q ss_pred CceEEEEEEecCCC-cchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccC-CcccccccccChHH
Q 002206 13 SKHLVFAYYVTGHG-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDC-GAVQADALTVDRLA 90 (953)
Q Consensus 13 m~~l~il~~v~~~G-~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~-g~~~~~~~~~~~~~ 90 (953)
|++ +|++. +.| .||++|+++||++|+++||+|+|++.... ...+.++..++.+... +. ++.. . ....
T Consensus 1 M~~-~i~i~--~GGTgGHi~palala~~L~~~g~~V~~vg~~~g-~e~~~v~~~g~~~~~i--~~~~~~~-~----~~~~ 69 (365)
T 3s2u_A 1 MKG-NVLIM--AGGTGGHVFPALACAREFQARGYAVHWLGTPRG-IENDLVPKAGLPLHLI--QVSGLRG-K----GLKS 69 (365)
T ss_dssp --C-EEEEE--CCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSS-THHHHTGGGTCCEEEC--C----------------
T ss_pred CCC-cEEEE--cCCCHHHHHHHHHHHHHHHhCCCEEEEEECCch-HhhchhhhcCCcEEEE--ECCCcCC-C----CHHH
Confidence 544 44333 334 49999999999999999999999976431 1111121112222221 11 1100 0 0000
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCC---chHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHH
Q 002206 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSI 167 (953)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~---~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~ 167 (953)
.+.....+ ...+.+..+.|++++||+||++.. ..+.++|+.+++|+|.+..-.+.-...
T Consensus 70 ~~~~~~~~-----~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~~G~~n------------- 131 (365)
T 3s2u_A 70 LVKAPLEL-----LKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGTAN------------- 131 (365)
T ss_dssp ---CHHHH-----HHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSSCCHHH-------------
T ss_pred HHHHHHHH-----HHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchhhhhHH-------------
Confidence 00001111 112334467789999999999862 335667889999999874222110111
Q ss_pred HHHHHhhccccceEEecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHH-Hhh-
Q 002206 168 VWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-EEY- 243 (953)
Q Consensus 168 ~~~l~~~~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll-~~l- 243 (953)
++.. +.++.++. .+....+...+.+.+|..++..... ..+...++++++++|+++.||++.. .+.+ +.+
T Consensus 132 --r~l~--~~a~~v~~-~~~~~~~~~~k~~~~g~pvr~~~~~--~~~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~ 204 (365)
T 3s2u_A 132 --RSLA--PIARRVCE-AFPDTFPASDKRLTTGNPVRGELFL--DAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALA 204 (365)
T ss_dssp --HHHG--GGCSEEEE-SSTTSSCC---CEECCCCCCGGGCC--CTTSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHH
T ss_pred --Hhhc--cccceeee-cccccccCcCcEEEECCCCchhhcc--chhhhcccCCCCcEEEEECCcCCccccchhhHHHHH
Confidence 1111 11222221 1111122223444444433211100 1122345556788999999999874 2222 221
Q ss_pred -CC--CCc-EEEEeCCCCCC--------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--
Q 002206 244 -LP--SGW-KCLVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY-- 309 (953)
Q Consensus 244 -l~--~~~-~~vv~G~~~~~--------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~-- 309 (953)
++ .++ .+.++|....+ ++.|+.+.+|+++|+++|+.||++|||+|.+|++|++++|+|+|++|.+.
T Consensus 205 ~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~ 284 (365)
T 3s2u_A 205 QVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAI 284 (365)
T ss_dssp TSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECC-----
T ss_pred hcccccceEEEEecCccccccccceecccccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEeccCCCC
Confidence 22 233 34466765421 57799999999999999999999999999999999999999999999753
Q ss_pred CCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHHHcc
Q 002206 310 FNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETAIG 373 (953)
Q Consensus 310 ~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l~~ 373 (953)
..+|..||+.+++.|+|+.+...+++++.|.++|.++++|++.+. ..+++++++|+.|++.++|
T Consensus 285 ~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~larG 357 (365)
T 3s2u_A 285 DDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG 357 (365)
T ss_dssp CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC--
T ss_pred CcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHcc
Confidence 368999999999999999999999999999999999999986432 5889999999999999765
No 19
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.94 E-value=1.9e-25 Score=258.24 Aligned_cols=346 Identities=16% Similarity=0.130 Sum_probs=209.8
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccC--CcccccccccCh
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDC--GAVQADALTVDR 88 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~--g~~~~~~~~~~~ 88 (953)
.+|+.++|++ ++.++.||++++++|+++|+++||+|+|+++... ...+...++.+.+...+. +.........+.
T Consensus 8 ~~m~~~~Il~-~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 83 (424)
T 2iya_A 8 ASVTPRHISF-FNIPGHGHVNPSLGIVQELVARGHRVSYAITDEF---AAQVKAAGATPVVYDSILPKESNPEESWPEDQ 83 (424)
T ss_dssp ---CCCEEEE-ECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGG---HHHHHHHTCEEEECCCCSCCTTCTTCCCCSSH
T ss_pred CCcccceEEE-EeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHH---HHHHHhCCCEEEecCccccccccchhhcchhH
Confidence 3466667766 4788999999999999999999999999987531 111111122332221110 100000001111
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCC--hhHHHHHH---------
Q 002206 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS--WDFIYAEY--------- 156 (953)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~--~~~~~~~~--------- 156 (953)
...+..+.. ..........+.+++.+||+||+|. .+++..+|+.+|||+|.+.+.. +..+....
T Consensus 84 ~~~~~~~~~----~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (424)
T 2iya_A 84 ESAMGLFLD----EAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTAD 159 (424)
T ss_dssp HHHHHHHHH----HHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC-
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccccc
Confidence 111111111 1122344556677788999999998 5678889999999999885432 11110000
Q ss_pred ------Hh-hhc---------cchHHHHHHH---Hhhcc----------ccceEEe-cCCCCCCC---CCCceeecCccc
Q 002206 157 ------VM-AAG---------HHHRSIVWQI---AEDYS----------HCEFLIR-LPGYCPMP---AFRDVIDVPLVV 203 (953)
Q Consensus 157 ------~~-~~~---------~~~~~~~~~l---~~~~~----------~~~~l~~-~~~~~~~p---~~~~v~~vg~~~ 203 (953)
.+ ... ..+..+...+ ...+. ..+..+. .+.....+ ..++++.+|+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~vGp~~ 239 (424)
T 2iya_A 160 RGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGPTY 239 (424)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGCCTTEEECCCCC
T ss_pred cccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccCCCCCEEEeCCCC
Confidence 00 000 0001111111 11110 1222222 12111111 123677788743
Q ss_pred ccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch-H----hHHHhhCCCCcEE-EEeCCCCC-----CCCCCeEECCCCCC
Q 002206 204 RRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKC-LVCGASDS-----QLPPNFIKLPKDAY 272 (953)
Q Consensus 204 ~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~----~ll~~ll~~~~~~-vv~G~~~~-----~lp~NV~v~~~~~~ 272 (953)
... .+..+++...+++++|||++||.+.. . .+++++...++.+ +++|.... .+|+|+++.+|.+.
T Consensus 240 ~~~----~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~ 315 (424)
T 2iya_A 240 GDR----SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQ 315 (424)
T ss_dssp CCC----GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEESSCCH
T ss_pred CCc----ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEecCCCH
Confidence 210 11112333234678999999998742 2 2334454456655 45676431 26889999887665
Q ss_pred HHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCC
Q 002206 273 TPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC 352 (953)
Q Consensus 273 ~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~ 352 (953)
+ ++|++||+||||||+||++|++++|+|+|++| .+.||+.||+++++.|+|+.+...+++++.+.++|+++++++..
T Consensus 316 ~-~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p--~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 392 (424)
T 2iya_A 316 L-DILTKASAFITHAGMGSTMEALSNAVPMVAVP--QIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGV 392 (424)
T ss_dssp H-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECC--CSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred H-HHHhhCCEEEECCchhHHHHHHHcCCCEEEec--CccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHH
Confidence 4 89999999999999999999999999999999 56799999999999999999988888899999999999987632
Q ss_pred cc---------CCCCHHHHHHHHHHHHH
Q 002206 353 YE---------GGINGGEVAAHILQETA 371 (953)
Q Consensus 353 ~~---------~~~~g~~~~A~~i~~~l 371 (953)
.. ...+|+.++++.|++++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 393 AERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 11 35688888888888875
No 20
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.94 E-value=3e-25 Score=255.69 Aligned_cols=345 Identities=14% Similarity=0.106 Sum_probs=206.8
Q ss_pred CCCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccc--cccccC
Q 002206 10 SASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQA--DALTVD 87 (953)
Q Consensus 10 ~~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~--~~~~~~ 87 (953)
+..|.| |+|+ +.+|.||++++++|+++|+++||+|+|+++.. +.+.+...++.+.....+...... ......
T Consensus 17 ~~~m~r--Il~~-~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 17 GRHMAH--LLIV-NVASHGLILPTLTVVTELVRRGHRVSYVTAGG---FAEPVRAAGATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp --CCCE--EEEE-CCSCHHHHGGGHHHHHHHHHTTCEEEEEECGG---GHHHHHHTTCEEEECCCSTTTCCHHHHHHSSS
T ss_pred cccCCE--EEEE-eCCCccccccHHHHHHHHHHCCCEEEEEeCHH---HHHHHHhcCCEEEeccccccccccchhhcccc
Confidence 455654 4444 56789999999999999999999999998642 111111112333332111110000 000001
Q ss_pred hHHHHHH-HHHHhhccHHHHHHHHHHHHHcCCCcEEEEC-C-CchHHHHHHHhCCcEEEEecCC-----hhH--HHHHHH
Q 002206 88 RLASLEK-YSETAVAPRKSILKDEVEWLNSIKADLVVSD-V-VPVACRAAADAGIRSVCVTNFS-----WDF--IYAEYV 157 (953)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D-~-~~~~~~~A~~~giP~I~is~~~-----~~~--~~~~~~ 157 (953)
....+.. +.. .......+..+.+++++||+||+| + .+++..+|+.+|||+|.+.... |.. ......
T Consensus 91 ~~~~~~~~~~~----~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (415)
T 3rsc_A 91 LGVRPHLMYLR----ENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLA 166 (415)
T ss_dssp SCHHHHHHHHH----HHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccccccccccc
Confidence 1111111 111 112234555677888999999999 5 5667788999999999875322 111 010000
Q ss_pred hhhcc-chHHH---HHHHHhhcc-----------ccceEE-ecCCCCCCC--C-CCceeecCcccccCCCChHHHHHHhC
Q 002206 158 MAAGH-HHRSI---VWQIAEDYS-----------HCEFLI-RLPGYCPMP--A-FRDVIDVPLVVRRLHKSRKEVRKELG 218 (953)
Q Consensus 158 ~~~~~-~~~~~---~~~l~~~~~-----------~~~~l~-~~~~~~~~p--~-~~~v~~vg~~~~~~~~~~~e~~~~l~ 218 (953)
..... .+.++ ...+...+. ..+..+ ..+.....+ . ..++..+|+..... .+..++..
T Consensus 167 ~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~----~~~~~~~~ 242 (415)
T 3rsc_A 167 GTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDR----RFLGEWTR 242 (415)
T ss_dssp TCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCC----GGGCCCCC
T ss_pred ccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCc----ccCcCccc
Confidence 00000 01111 111111111 112222 222222111 1 12456677633211 11112222
Q ss_pred CCCCCcEEEEEcCCCCch-H----hHHHhhCCCCcEEEE-eCCCCC-----CCCCCeEECCCCCCHHHHHhhcCEEEecC
Q 002206 219 IEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLV-CGASDS-----QLPPNFIKLPKDAYTPDFMAASDCMLGKI 287 (953)
Q Consensus 219 ~~~~~~vVlvs~Gs~~~~-~----~ll~~ll~~~~~~vv-~G~~~~-----~lp~NV~v~~~~~~~pdlLa~aDlfIthg 287 (953)
..+++++||+++||.... . .+++.+...++.+++ +|.... .+++|+++.+|.+.+ ++|++||+||+||
T Consensus 243 ~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~-~ll~~ad~~v~~~ 321 (415)
T 3rsc_A 243 PADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHV-KVLEQATVCVTHG 321 (415)
T ss_dssp CSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCCHH-HHHHHEEEEEESC
T ss_pred cCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCCHH-HHHhhCCEEEECC
Confidence 235678999999998653 1 233344434476555 675421 268899998887654 9999999999999
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCC
Q 002206 288 GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGIN 358 (953)
Q Consensus 288 G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~ 358 (953)
|++|++|++++|+|+|++| ...||+.||+++++.|+|+.+...+++++.+.++|.++++++.... ...+
T Consensus 322 G~~t~~Ea~~~G~P~v~~p--~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 399 (415)
T 3rsc_A 322 GMGTLMEALYWGRPLVVVP--QSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRRAG 399 (415)
T ss_dssp CHHHHHHHHHTTCCEEECC--CSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHhCCCEEEeC--CcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999 5789999999999999999999888899999999999998763221 3567
Q ss_pred HHHHHHHHHHHHH
Q 002206 359 GGEVAAHILQETA 371 (953)
Q Consensus 359 g~~~~A~~i~~~l 371 (953)
|+.++++.|++++
T Consensus 400 ~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 400 GAARAADAVEAYL 412 (415)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8888888888765
No 21
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.93 E-value=9.8e-25 Score=251.74 Aligned_cols=343 Identities=10% Similarity=0.014 Sum_probs=201.1
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccC-CcccccccccChHHHHHHH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDC-GAVQADALTVDRLASLEKY 95 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 95 (953)
+|+++ ++++.||++|+++|+++|+++||+|+|+++... ...+...++.+.....+. .... . ....... .+
T Consensus 2 ~Il~~-~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~---~~~v~~~g~~~~~i~~~~~~~~~-~-~~~~~~~---~~ 72 (415)
T 1iir_A 2 RVLLA-TCGSRGDTEPLVALAVRVRDLGADVRMCAPPDC---AERLAEVGVPHVPVGPSARAPIQ-R-AKPLTAE---DV 72 (415)
T ss_dssp EEEEE-CCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGG---HHHHHHTTCCEEECCC--------C-CSCCCHH---HH
T ss_pred eEEEE-cCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHH---HHHHHHcCCeeeeCCCCHHHHhh-c-ccccchH---HH
Confidence 56555 778899999999999999999999999987541 111111122222211110 0000 0 0001100 11
Q ss_pred HHHhhccHHHHHHHHHHHHH--cCCCcEEEECC--Cch--HHHHHHHhCCcEEEEecCC-hhH------------H----
Q 002206 96 SETAVAPRKSILKDEVEWLN--SIKADLVVSDV--VPV--ACRAAADAGIRSVCVTNFS-WDF------------I---- 152 (953)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~--~~kpDlVV~D~--~~~--~~~~A~~~giP~I~is~~~-~~~------------~---- 152 (953)
..+. ........+.+. ..+||+||+|. .++ +..+|+.+|||+|.+.... +.. .
T Consensus 73 ~~~~----~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~p~~~~~~~~~~~~ 148 (415)
T 1iir_A 73 RRFT----TEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDT 148 (415)
T ss_dssp HHHH----HHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC---------
T ss_pred HHHH----HHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcccCCccCCccccchH
Confidence 1111 011122223332 57999999996 556 7788999999999885432 100 0
Q ss_pred -HHHHHhhhccc-----hHHHHHHHHhhc--cc----------cceEEecCCCC---CCCCCCceeecCccccc-CCCCh
Q 002206 153 -YAEYVMAAGHH-----HRSIVWQIAEDY--SH----------CEFLIRLPGYC---PMPAFRDVIDVPLVVRR-LHKSR 210 (953)
Q Consensus 153 -~~~~~~~~~~~-----~~~~~~~l~~~~--~~----------~~~l~~~~~~~---~~p~~~~v~~vg~~~~~-~~~~~ 210 (953)
...+.....+. +....+.+...+ .. .-.+...+... +.+.. +++.+|+.... +...+
T Consensus 149 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~-~~~~vG~~~~~~~~~~~ 227 (415)
T 1iir_A 149 IDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDL-DAVQTGAWILPDERPLS 227 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCCCSS-CCEECCCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhhcCCCcccC-CeEeeCCCccCcccCCC
Confidence 00000000000 000011111111 10 00122222221 22233 67888885432 23345
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCC-ch---HhHHHhhCCCCcEE-EEeCCCCC---CCCCCeEECCCCCCHHHHHhhcCE
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQP-AG---WKLKEEYLPSGWKC-LVCGASDS---QLPPNFIKLPKDAYTPDFMAASDC 282 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~-~~---~~ll~~ll~~~~~~-vv~G~~~~---~lp~NV~v~~~~~~~pdlLa~aDl 282 (953)
.++.++++. ++++|||++||.+ .. ..+++.+...++.+ +++|.... .+|+|+++.+|.+. .++|++||+
T Consensus 228 ~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~-~~~l~~~d~ 304 (415)
T 1iir_A 228 PELAAFLDA--GPPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNH-QVLFGRVAA 304 (415)
T ss_dssp HHHHHHHHT--SSCCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCH-HHHGGGSSE
T ss_pred HHHHHHHhh--CCCeEEEeCCCCCCcHHHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEEeCcCCh-HHHHhhCCE
Confidence 677777753 4578999999985 32 12333332223444 44565432 26789999877653 489999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc--------
Q 002206 283 MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-------- 354 (953)
Q Consensus 283 fIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~-------- 354 (953)
||||||+||++|++++|+|+|++| .+.||..||+++++.|+|+.++..+++++.+.++|+++ +++....
T Consensus 305 ~v~~~G~~t~~Ea~~~G~P~i~~p--~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~ 381 (415)
T 1iir_A 305 VIHHGGAGTTHVAARAGAPQILLP--QMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGT 381 (415)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHH
T ss_pred EEeCCChhHHHHHHHcCCCEEECC--CCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHH
Confidence 999999999999999999999999 57899999999999999999988888899999999999 7753211
Q ss_pred -CCCCHHHHHHHHHHHHHccCCCcCCCCchhhhh
Q 002206 355 -GGINGGEVAAHILQETAIGKNYASDKLSGARRL 387 (953)
Q Consensus 355 -~~~~g~~~~A~~i~~~l~~~~~~~~~~~ga~~L 387 (953)
...+|+.+++++|++++. ++|+.||
T Consensus 382 ~~~~~~~~~~~~~i~~~~~--------~~~~~~~ 407 (415)
T 1iir_A 382 IRTDGAAVAARLLLDAVSR--------EKPTVSA 407 (415)
T ss_dssp SCSCHHHHHHHHHHHHHHT--------C------
T ss_pred HhhcChHHHHHHHHHHHHh--------cccHHHH
Confidence 467899999999988753 3466665
No 22
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.93 E-value=1.3e-24 Score=248.68 Aligned_cols=343 Identities=18% Similarity=0.108 Sum_probs=206.6
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCccc--ccccccChHHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQ--ADALTVDRLASLE 93 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~ 93 (953)
++|+|+ +.++.||++++++|+++|+++||+|+|+++.. +.+.+...++.+.....+..... ...........+.
T Consensus 5 ~~il~~-~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (402)
T 3ia7_A 5 RHILFA-NVQGHGHVYPSLGLVSELARRGHRITYVTTPL---FADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLH 80 (402)
T ss_dssp CEEEEE-CCSSHHHHHHHHHHHHHHHHTTCEEEEEECHH---HHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHH
T ss_pred CEEEEE-eCCCCcccccHHHHHHHHHhCCCEEEEEcCHH---HHHHHHHcCCEEEecccccccccccccccccchHHHHH
Confidence 356554 56689999999999999999999999998742 11111111223332211110000 0000111111111
Q ss_pred H-HHHHhhccHHHHHHHHHHHHHcCCCcEEEEC-C-CchHHHHHHHhCCcEEEEecCCh-----hH--HHHHHHhhhcc-
Q 002206 94 K-YSETAVAPRKSILKDEVEWLNSIKADLVVSD-V-VPVACRAAADAGIRSVCVTNFSW-----DF--IYAEYVMAAGH- 162 (953)
Q Consensus 94 ~-~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D-~-~~~~~~~A~~~giP~I~is~~~~-----~~--~~~~~~~~~~~- 162 (953)
. +.. ..........+.+++++||+||+| + .+++..+|+.+|||+|.+....+ .. ...........
T Consensus 81 ~~~~~----~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (402)
T 3ia7_A 81 LVYVR----ENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPA 156 (402)
T ss_dssp HHHHH----HHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCCGG
T ss_pred HHHHH----HHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccccccccChh
Confidence 1 111 112234555677888999999999 4 56678888999999998853221 11 00000000000
Q ss_pred chHHHHH---HHHhhcc-----------ccceEEe-cCCCCCCC--C-CCceeecCcccccCCCChHHHHHHhCCCCCCc
Q 002206 163 HHRSIVW---QIAEDYS-----------HCEFLIR-LPGYCPMP--A-FRDVIDVPLVVRRLHKSRKEVRKELGIEDDVK 224 (953)
Q Consensus 163 ~~~~~~~---~l~~~~~-----------~~~~l~~-~~~~~~~p--~-~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~ 224 (953)
.+..+.. .+...+. ..+..+. .+.....+ . ..++..+|+..... .+...+....++++
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~----~~~~~~~~~~~~~~ 232 (402)
T 3ia7_A 157 DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLTGR----DGQPGWQPPRPDAP 232 (402)
T ss_dssp GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTTEEECCCCCCC--------CCCCCSSTTCC
T ss_pred hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCCCCeEEeCCCCCCc----ccCCCCcccCCCCC
Confidence 0111111 1111111 0022221 22111111 1 12466676533211 11112222235678
Q ss_pred EEEEEcCCCCch-H----hHHHhhCCCCcEEE-EeCCCCC-----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHH
Q 002206 225 LLILNFGGQPAG-W----KLKEEYLPSGWKCL-VCGASDS-----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVS 293 (953)
Q Consensus 225 vVlvs~Gs~~~~-~----~ll~~ll~~~~~~v-v~G~~~~-----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~ 293 (953)
+||+++||.... . .+++.+...++.++ ++|.... .+++|+++.+|.+.+ ++|++||+||+|+|++|++
T Consensus 233 ~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~-~ll~~ad~~v~~~G~~t~~ 311 (402)
T 3ia7_A 233 VLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFH-SVLAHARACLTHGTTGAVL 311 (402)
T ss_dssp EEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHH-HHHTTEEEEEECCCHHHHH
T ss_pred EEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHH-HHHhhCCEEEECCCHHHHH
Confidence 999999998763 1 23334444446554 4675421 268899998888765 9999999999999999999
Q ss_pred HHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHH
Q 002206 294 EALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAA 364 (953)
Q Consensus 294 Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A 364 (953)
|++++|+|+|++|.+ ..||..|++.+++.|+|+.+..++++++.|.++|.++++++..+. ...+++.++|
T Consensus 312 Ea~~~G~P~v~~p~~-~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (402)
T 3ia7_A 312 EAFAAGVPLVLVPHF-ATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILSSGGPARAA 390 (402)
T ss_dssp HHHHTTCCEEECGGG-CGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHhCCCEEEeCCC-cccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhCChHHHHH
Confidence 999999999999941 679999999999999999999888889999999999998873221 3668999999
Q ss_pred HHHHHHHc
Q 002206 365 HILQETAI 372 (953)
Q Consensus 365 ~~i~~~l~ 372 (953)
+.|++++.
T Consensus 391 ~~i~~~~~ 398 (402)
T 3ia7_A 391 DEVEAYLG 398 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988764
No 23
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.93 E-value=8.6e-25 Score=251.37 Aligned_cols=342 Identities=13% Similarity=0.051 Sum_probs=200.9
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccc-cccc-cChHHHHHH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQA-DALT-VDRLASLEK 94 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~ 94 (953)
+|+++ +....||+.++++|+++|+++||+|+|+++.. +.+.+...++.+.+...+...... .... ......
T Consensus 2 rIli~-~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~---~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~--- 74 (404)
T 3h4t_A 2 GVLIT-GCGSRGDTEPLVALAARLRELGADARMCLPPD---YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEV--- 74 (404)
T ss_dssp CEEEE-EESSHHHHHHHHHHHHHHHHTTCCEEEEECGG---GHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGG---
T ss_pred eEEEE-eCCCCccHHHHHHHHHHHHHCCCeEEEEeCHH---HHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHH---
Confidence 45544 34567999999999999999999999998743 111111112222221111100000 0000 000000
Q ss_pred HHHHhhccHHHHHHHHHHHHHcCCCcEEEECCC-chH---HHHHHHhCCcEEEEecCChh---HHHHHHHhhh----ccc
Q 002206 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVV-PVA---CRAAADAGIRSVCVTNFSWD---FIYAEYVMAA----GHH 163 (953)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~-~~~---~~~A~~~giP~I~is~~~~~---~~~~~~~~~~----~~~ 163 (953)
+... .........+.+ .+||+||+|.. +.+ ..+|..+|||++.+....|. ..+....... ...
T Consensus 75 ~~~~----~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 148 (404)
T 3h4t_A 75 VTEV----VAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRL 148 (404)
T ss_dssp HHHH----HHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHH
T ss_pred HHHH----HHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHHHH
Confidence 1000 011111112222 47999998853 333 67789999999988654431 0000000000 000
Q ss_pred hHHHHHHHHhhc--cc---------cc-eEEecCCC-CCC-CCCCceeecCcccc-cCCCChHHHHHHhCCCCCCcEEEE
Q 002206 164 HRSIVWQIAEDY--SH---------CE-FLIRLPGY-CPM-PAFRDVIDVPLVVR-RLHKSRKEVRKELGIEDDVKLLIL 228 (953)
Q Consensus 164 ~~~~~~~l~~~~--~~---------~~-~l~~~~~~-~~~-p~~~~v~~vg~~~~-~~~~~~~e~~~~l~~~~~~~vVlv 228 (953)
+....+.....+ .. .+ .++..... .+. |..++++.+|+... .....+++++++++ +++++|||
T Consensus 149 ~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~~~~~~~~~~G~~~~~~~~~~~~~l~~~l~--~~~~~Vlv 226 (404)
T 3h4t_A 149 FGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDQRPLSAELEGFLR--AGSPPVYV 226 (404)
T ss_dssp HHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCCCHHHHHHHH--TSSCCEEE
T ss_pred hHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCCCCCCCeEEeCccccCCCCCCCHHHHHHHh--cCCCeEEE
Confidence 001111111111 00 01 11111111 111 11235666776333 34456678888876 35689999
Q ss_pred EcCCCCch----HhHHHhhCCCCcEEE-EeCCCCC---CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCC
Q 002206 229 NFGGQPAG----WKLKEEYLPSGWKCL-VCGASDS---QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKL 300 (953)
Q Consensus 229 s~Gs~~~~----~~ll~~ll~~~~~~v-v~G~~~~---~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~Gv 300 (953)
++||.+.. ..+++.+...++.++ .+|.... .+++|+++.+|.+ +.++|++||+||||||+||++|++++|+
T Consensus 227 ~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~-~~~ll~~~d~~v~~gG~~t~~Eal~~Gv 305 (404)
T 3h4t_A 227 GFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVN-HQVLFGRVAAVVHHGGAGTTTAVTRAGA 305 (404)
T ss_dssp CCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCC-HHHHGGGSSEEEECCCHHHHHHHHHHTC
T ss_pred ECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCC-HHHHHhhCcEEEECCcHHHHHHHHHcCC
Confidence 99998732 123333333355444 4454332 2588999988765 3689999999999999999999999999
Q ss_pred cEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc----------CCCCHHHHHHHHHHHH
Q 002206 301 PFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE----------GGINGGEVAAHILQET 370 (953)
Q Consensus 301 P~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~----------~~~~g~~~~A~~i~~~ 370 (953)
|+|++| .+.||+.|++++++.|+|+.+...+++++.+.++|.++++ + .|+ .. +|+.+++++|+++
T Consensus 306 P~v~~p--~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~-~~~~~~~~~~~~~~~-~~~~~~~~~i~~~ 380 (404)
T 3h4t_A 306 PQVVVP--QKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-P-GIRARAAAVAGTIRT-DGTTVAAKLLLEA 380 (404)
T ss_dssp CEEECC--CSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-H-HHHHHHHHHHTTCCC-CHHHHHHHHHHHH
T ss_pred CEEEcC--CcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-H-HHHHHHHHHHHHHhh-hHHHHHHHHHHHH
Confidence 999999 5789999999999999999999888899999999999997 4 332 35 9999999999999
Q ss_pred HccCCCcCC
Q 002206 371 AIGKNYASD 379 (953)
Q Consensus 371 l~~~~~~~~ 379 (953)
+...++...
T Consensus 381 ~~~~~~~~~ 389 (404)
T 3h4t_A 381 ISRQRSSVP 389 (404)
T ss_dssp HHC------
T ss_pred HhhCCCcch
Confidence 876544443
No 24
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.93 E-value=5.5e-24 Score=249.57 Aligned_cols=320 Identities=15% Similarity=0.134 Sum_probs=190.3
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHC-CCcEEEEeCCCCcccccccC------CCceeeeeecccCCcccccccc-cC
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAPDFVFTSEIQ------SPRLFIRKVLLDCGAVQADALT-VD 87 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~r-GHeVt~is~~~~~~~~~~i~------~~~~~~~~~~~~~g~~~~~~~~-~~ 87 (953)
++|++ ++.++.||++++++|+++|++| ||+|||++..... +...+. .+.+.+..... +... +... .+
T Consensus 7 ~~vl~-~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~-~~~~~~~~~~~~~~~i~~~~l~~--~~~~-~~~~~~~ 81 (480)
T 2vch_A 7 PHVAI-IPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGP-PSKAQRTVLDSLPSSISSVFLPP--VDLT-DLSSSTR 81 (480)
T ss_dssp CEEEE-ECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSS-CC-CHHHHHC-CCTTEEEEECCC--CCCT-TSCTTCC
T ss_pred cEEEE-ecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcc-hhhhhhhhccccCCCceEEEcCC--CCCC-CCCCchh
Confidence 34433 5789999999999999999998 9999999876421 111110 12344444211 1110 0000 01
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHHH-HcCCC-cEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHH---HHHH--
Q 002206 88 RLASLEKYSETAVAPRKSILKDEVEWL-NSIKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIY---AEYV-- 157 (953)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~kp-DlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~---~~~~-- 157 (953)
. ...+......... .+.+.++.+ ...+| |+||+|. ..++..+|+++|||.|.+...... ..+ ....
T Consensus 82 ~---~~~~~~~~~~~~~-~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 82 I---ESRISLTVTRSNP-ELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp H---HHHHHHHHHTTHH-HHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHhhhH-HHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 1 1111111110111 122222222 23578 9999997 567788999999999988654421 111 0000
Q ss_pred --------------hhh--------ccch-H---HHHHHH---HhhccccceEEecCCCC-----------CCCCCCcee
Q 002206 158 --------------MAA--------GHHH-R---SIVWQI---AEDYSHCEFLIRLPGYC-----------PMPAFRDVI 197 (953)
Q Consensus 158 --------------~~~--------~~~~-~---~~~~~l---~~~~~~~~~l~~~~~~~-----------~~p~~~~v~ 197 (953)
+.. ...+ + .....+ ...+..+..++..++.. +.|..++++
T Consensus 158 ~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 158 VSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred CCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 000 0000 0 111111 12223333333222211 122246899
Q ss_pred ecCcccccC-----CCChHHHHHHhCCCCCCcEEEEEcCCCCch-H----hHHHhhCCCCcEEE-EeCCCC---------
Q 002206 198 DVPLVVRRL-----HKSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCL-VCGASD--------- 257 (953)
Q Consensus 198 ~vg~~~~~~-----~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~----~ll~~ll~~~~~~v-v~G~~~--------- 257 (953)
.||+..... ...+.++.+|++..+++++|||||||.... . ++..++...+..++ +++...
T Consensus 238 ~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~ 317 (480)
T 2vch_A 238 PVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFD 317 (480)
T ss_dssp ECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTC
T ss_pred EEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccc
Confidence 999954322 123457788887656789999999998752 2 23334444455444 344321
Q ss_pred --------CCCCCCe--------EECCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHH
Q 002206 258 --------SQLPPNF--------IKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLR 317 (953)
Q Consensus 258 --------~~lp~NV--------~v~~~~~~~p--dlLa~aD--lfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA 317 (953)
..+|+|+ .++. +|+| ++|+|++ +||||||+||++|++++|||+|++| .+.||+.||
T Consensus 318 ~~~~~~~~~~lp~~~~~~~~~~g~~v~--~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P--~~~DQ~~na 393 (480)
T 2vch_A 318 SHSQTDPLTFLPPGFLERTKKRGFVIP--FWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWP--LYAEQKMNA 393 (480)
T ss_dssp C--CSCGGGGSCTTHHHHTTTTEEEEE--SCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHH
T ss_pred cccccchhhhcCHHHHHHhCCCeEEEe--CccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecc--ccccchHHH
Confidence 1268886 3322 3666 8998877 8999999999999999999999999 689999999
Q ss_pred HHH-HHcCcEEEEecC---CCChhhHHHHHHHHHh
Q 002206 318 NML-EFYQGGVEMIRR---DLLTGHWKPYLERAIS 348 (953)
Q Consensus 318 ~~l-~~~G~g~~l~~~---dl~~~~l~~al~~ll~ 348 (953)
+++ ++.|+|+.+... .++++.+.++|++++.
T Consensus 394 ~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 394 VLLSEDIRAALRPRAGDDGLVRREEVARVVKGLME 428 (480)
T ss_dssp HHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhc
Confidence 998 699999999775 6889999999999996
No 25
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.93 E-value=2.8e-24 Score=247.96 Aligned_cols=336 Identities=10% Similarity=0.008 Sum_probs=202.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccC-CcccccccccChHHHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDC-GAVQADALTVDRLASLEK 94 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 94 (953)
|+|+++ ++++.||+.++++|+++|+++||+|+|+++.. +.+.+...++.+.+...+. +... ......... .
T Consensus 1 MrIl~~-~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~---~~~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~~~---~ 72 (416)
T 1rrv_A 1 MRVLLS-VCGTRGDVEIGVALADRLKALGVQTRMCAPPA---AEERLAEVGVPHVPVGLPQHMMLQ-EGMPPPPPE---E 72 (416)
T ss_dssp CEEEEE-EESCHHHHHHHHHHHHHHHHTTCEEEEEECGG---GHHHHHHHTCCEEECSCCGGGCCC-TTSCCCCHH---H
T ss_pred CeEEEE-ecCCCccHHHHHHHHHHHHHCCCeEEEEeCHH---HHHHHHHcCCeeeecCCCHHHHHh-hccccchhH---H
Confidence 356665 67789999999999999999999999998753 1111111122222211110 1110 000001000 1
Q ss_pred HHHHhhccHHHHHHHHHHHHH--cCCCcEEEECC--Cch--HHHHHHHhCCcEEEEecCC-hhH----------------
Q 002206 95 YSETAVAPRKSILKDEVEWLN--SIKADLVVSDV--VPV--ACRAAADAGIRSVCVTNFS-WDF---------------- 151 (953)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~L~--~~kpDlVV~D~--~~~--~~~~A~~~giP~I~is~~~-~~~---------------- 151 (953)
+..++ .....+..+.+. .++||+||+|. .++ +..+|+.+|||+|.+.... +..
T Consensus 73 ~~~~~----~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p~~~~~~~~~~r 148 (416)
T 1rrv_A 73 EQRLA----AMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGV 148 (416)
T ss_dssp HHHHH----HHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCTTC
T ss_pred HHHHH----HHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccCCCCCCCCCchH
Confidence 11111 011122333444 67999999985 455 7788999999999874332 100
Q ss_pred HHHHHHhhhccc-----hHHHHHHHHhhc--cc----------cceEEecCCCC--CCCCCCceeecCccccc-CCCChH
Q 002206 152 IYAEYVMAAGHH-----HRSIVWQIAEDY--SH----------CEFLIRLPGYC--PMPAFRDVIDVPLVVRR-LHKSRK 211 (953)
Q Consensus 152 ~~~~~~~~~~~~-----~~~~~~~l~~~~--~~----------~~~l~~~~~~~--~~p~~~~v~~vg~~~~~-~~~~~~ 211 (953)
....+....... +....+.+...+ .. .-.++..+... +.+.. +++.+|+.... ....+.
T Consensus 149 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~-~~~~vG~~~~~~~~~~~~ 227 (416)
T 1rrv_A 149 TDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDV-DAVQTGAWLLSDERPLPP 227 (416)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCCCSSC-CCEECCCCCCCCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCCCeEEccCccccCCCCCC-CeeeECCCccCccCCCCH
Confidence 000000000000 000001111111 10 00111111111 11222 67788885432 233456
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCc--hHh----HHHhhCCCCcEEE-EeCCCCC---CCCCCeEECCCCCCHHHHHhhcC
Q 002206 212 EVRKELGIEDDVKLLILNFGGQPA--GWK----LKEEYLPSGWKCL-VCGASDS---QLPPNFIKLPKDAYTPDFMAASD 281 (953)
Q Consensus 212 e~~~~l~~~~~~~vVlvs~Gs~~~--~~~----ll~~ll~~~~~~v-v~G~~~~---~lp~NV~v~~~~~~~pdlLa~aD 281 (953)
++.++++. ++++|||++||.+. ..+ +++++...++.++ ++|.... .+|+|+++.+|.+ +.++|++||
T Consensus 228 ~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~-~~~ll~~~d 304 (416)
T 1rrv_A 228 ELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVN-FQALFRRVA 304 (416)
T ss_dssp HHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCC-HHHHGGGSS
T ss_pred HHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCC-hHHHhccCC
Confidence 77777752 45789999999874 222 2333322345444 4575432 2688999988775 569999999
Q ss_pred EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc-------
Q 002206 282 CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE------- 354 (953)
Q Consensus 282 lfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~------- 354 (953)
+||||||+||++|++++|+|+|++| .+.||+.||+++++.|+|+.++..+++++.+.++|+++ .++....
T Consensus 305 ~~v~~~G~~t~~Ea~~~G~P~i~~p--~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~ 381 (416)
T 1rrv_A 305 AVIHHGSAGTEHVATRAGVPQLVIP--RNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVAG 381 (416)
T ss_dssp EEEECCCHHHHHHHHHHTCCEEECC--CSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHTT
T ss_pred EEEecCChhHHHHHHHcCCCEEEcc--CCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHHH
Confidence 9999999999999999999999999 57899999999999999999988888899999999999 7763211
Q ss_pred --CCCCHHHHHHHHH-HHHH
Q 002206 355 --GGINGGEVAAHIL-QETA 371 (953)
Q Consensus 355 --~~~~g~~~~A~~i-~~~l 371 (953)
...+|+ +++++| ++++
T Consensus 382 ~~~~~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 382 MVLTDGAA-AAADLVLAAVG 400 (416)
T ss_dssp TCCCCHHH-HHHHHHHHHHH
T ss_pred HHhhcCcH-HHHHHHHHHHh
Confidence 457788 888888 7764
No 26
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.93 E-value=2.6e-24 Score=248.65 Aligned_cols=344 Identities=12% Similarity=0.061 Sum_probs=207.3
Q ss_pred ceEEEEEEecCCCcchHHHHHHHHHHHHHCC--CcEEEEeCCC--Ccccccc-cCCCceeeeeecccCCcccccccccCh
Q 002206 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAG--HDVHVVTGAP--DFVFTSE-IQSPRLFIRKVLLDCGAVQADALTVDR 88 (953)
Q Consensus 14 ~~l~il~~v~~~G~GH~~r~l~La~~L~~rG--HeVt~is~~~--~~~~~~~-i~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (953)
++.+|++ ++.++.||+++++.||+.|+.+| +.|||++... ....... ...+.+.+.... .|+........+.
T Consensus 12 ~~~hvv~-~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip--dglp~~~~~~~~~ 88 (454)
T 3hbf_A 12 NLLHVAV-LAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH--DGLPKGYVSSGNP 88 (454)
T ss_dssp CCCEEEE-ECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC--CCCCTTCCCCSCT
T ss_pred CCCEEEE-EcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC--CCCCCCccccCCh
Confidence 3456644 58999999999999999999999 9999998631 0111110 001334444321 1221100001111
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHH-HHc--CCCcEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHH---HHH--
Q 002206 89 LASLEKYSETAVAPRKSILKDEVEW-LNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYA---EYV-- 157 (953)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-L~~--~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~---~~~-- 157 (953)
...+..+... ... .+.+.++. +.+ .++|+||+|. .+++..+|+.+|||.+.+...+.. ..+. ...
T Consensus 89 ~~~~~~~~~~---~~~-~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 89 REPIFLFIKA---MQE-NFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp THHHHHHHHH---HHH-HHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHH---HHH-HHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 1111111111 111 12222222 232 4799999997 778999999999999988554421 0110 000
Q ss_pred ---------------hhhcc----c----h-----HHHHH---HHHhhccccceEEecCCCC--------CCCCCCceee
Q 002206 158 ---------------MAAGH----H----H-----RSIVW---QIAEDYSHCEFLIRLPGYC--------PMPAFRDVID 198 (953)
Q Consensus 158 ---------------~~~~~----~----~-----~~~~~---~l~~~~~~~~~l~~~~~~~--------~~p~~~~v~~ 198 (953)
+.... . + ..... ........++.++.-++.. .++.++++..
T Consensus 165 ~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~ 244 (454)
T 3hbf_A 165 TGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLN 244 (454)
T ss_dssp CCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEE
T ss_pred cCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEE
Confidence 00000 0 0 01111 1122333444444322211 1345578999
Q ss_pred cCcccc-cCC---CChHHHHHHhCCCCCCcEEEEEcCCCCch-H----hHHHhhCCCCcEEE-EeCCCC-----CC----
Q 002206 199 VPLVVR-RLH---KSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCL-VCGASD-----SQ---- 259 (953)
Q Consensus 199 vg~~~~-~~~---~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~-~----~ll~~ll~~~~~~v-v~G~~~-----~~---- 259 (953)
|||... .+. ..+.++.+||+..+++++|||+|||.+.. . ++..++...++.++ ++|... +.
T Consensus 245 vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~ 324 (454)
T 3hbf_A 245 VGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLER 324 (454)
T ss_dssp CCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHH
T ss_pred ECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhh
Confidence 999543 221 22456888998767889999999999862 1 23333433344343 445432 11
Q ss_pred CCCCeEECCCCCCHHHHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEecCCCCh
Q 002206 260 LPPNFIKLPKDAYTPDFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRDLLT 336 (953)
Q Consensus 260 lp~NV~v~~~~~~~pdlLa~aD--lfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~-G~g~~l~~~dl~~ 336 (953)
.++|+++.+|.+. .++|+|++ +||||||+||++|++++|||+|++| .+.||+.||+++++. |+|+.+...+++.
T Consensus 325 ~~~~~~vv~w~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P--~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~ 401 (454)
T 3hbf_A 325 TKTKGKIVAWAPQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRP--FFGDQGLNTILTESVLEIGVGVDNGVLTK 401 (454)
T ss_dssp TTTTEEEESSCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHTTSCSEEECGGGSCCH
T ss_pred cCCceEEEeeCCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCc--ccccHHHHHHHHHHhhCeeEEecCCCCCH
Confidence 3568888654332 28999988 9999999999999999999999999 689999999999995 9999999888999
Q ss_pred hhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHHc
Q 002206 337 GHWKPYLERAISLKPCYEGGINGGEVAAHILQETAI 372 (953)
Q Consensus 337 ~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l~ 372 (953)
+.+.++|+++++++ .....++.|..|.+.++
T Consensus 402 ~~l~~av~~ll~~~-----~~~~~r~~a~~l~~~~~ 432 (454)
T 3hbf_A 402 ESIKKALELTMSSE-----KGGIMRQKIVKLKESAF 432 (454)
T ss_dssp HHHHHHHHHHHSSH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC-----hHHHHHHHHHHHHHHHH
Confidence 99999999999653 11234555666655543
No 27
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.92 E-value=3.5e-24 Score=249.12 Aligned_cols=346 Identities=15% Similarity=0.119 Sum_probs=202.3
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccC---Cccccc--c-------
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDC---GAVQAD--A------- 83 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~---g~~~~~--~------- 83 (953)
|+|+|+ ++++.||+.++++|+++|+++||+|+|+++... .+.+...++.+.+...+. +..... .
T Consensus 21 mrIl~~-~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~---~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 96 (441)
T 2yjn_A 21 MRVVFS-SMASKSHLFGLVPLAWAFRAAGHEVRVVASPAL---TEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRS 96 (441)
T ss_dssp CEEEEE-CCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGG---HHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTT
T ss_pred cEEEEE-cCCCcchHhHHHHHHHHHHHCCCeEEEEeCchh---HHHHHhCCCceeecCCccchHHHhhhhhccccccccc
Confidence 567665 778899999999999999999999999987531 122211223333321111 000000 0
Q ss_pred cc-----cC--hHHHHHH----HHHHhhc-cHHH-HHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCCh
Q 002206 84 LT-----VD--RLASLEK----YSETAVA-PRKS-ILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW 149 (953)
Q Consensus 84 ~~-----~~--~~~~~~~----~~~~~~~-~~~~-~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~ 149 (953)
.. .. ....+.. +..++.. .... .+.+..+.+++++||+||+|. .+++..+|+.+|||+|.+. +++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~-~~~ 175 (441)
T 2yjn_A 97 LDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLL-WGP 175 (441)
T ss_dssp CCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEEEEC-SSC
T ss_pred ccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEEEEe-cCC
Confidence 00 00 0001101 1111100 0001 345556677889999999997 6788889999999999884 222
Q ss_pred hH---HHHHHHhhhc--------cchHHHHHHHHhhccc---------cceEEe-cCCCCCCC-CCCceeecCcccccCC
Q 002206 150 DF---IYAEYVMAAG--------HHHRSIVWQIAEDYSH---------CEFLIR-LPGYCPMP-AFRDVIDVPLVVRRLH 207 (953)
Q Consensus 150 ~~---~~~~~~~~~~--------~~~~~~~~~l~~~~~~---------~~~l~~-~~~~~~~p-~~~~v~~vg~~~~~~~ 207 (953)
.. ....+..... ..+..........+.. .+..+. .+.....| ..+. ..+... +.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~---~~ 251 (441)
T 2yjn_A 176 DITTRARQNFLGLLPDQPEEHREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLDTGLKT-VGMRYV---DY 251 (441)
T ss_dssp CHHHHHHHHHHHHGGGSCTTTCCCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCCCCCCE-EECCCC---CC
T ss_pred CcchhhhhhhhhhccccccccccchHHHHHHHHHHHcCCCCCCccccCCCeEEEecCccccCCCCCCC-Cceeee---CC
Confidence 11 1111111000 0011111122211111 111221 11111111 1110 011110 10
Q ss_pred CChHHHHHHhCCCCCCcEEEEEcCCCCch--------HhHHHhhCCCCcEEEEe-CCCC-C---CCCCCeEECCCCCCHH
Q 002206 208 KSRKEVRKELGIEDDVKLLILNFGGQPAG--------WKLKEEYLPSGWKCLVC-GASD-S---QLPPNFIKLPKDAYTP 274 (953)
Q Consensus 208 ~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--------~~ll~~ll~~~~~~vv~-G~~~-~---~lp~NV~v~~~~~~~p 274 (953)
..+.++.++++..+++++|||++||.+.. ..+++++...++.+++. |... . .+|+||++.+|++. .
T Consensus 252 ~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~-~ 330 (441)
T 2yjn_A 252 NGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPM-H 330 (441)
T ss_dssp CSSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCH-H
T ss_pred CCCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCCCH-H
Confidence 01223345665445678999999998752 12333443345666654 4322 1 25789999887764 6
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc
Q 002206 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE 354 (953)
Q Consensus 275 dlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~ 354 (953)
++|++||+||+|||++|++|++++|+|+|++| .+.||+.||+++++.|+|+.+...+++++.|.++|.++++++....
T Consensus 331 ~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p--~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~ 408 (441)
T 2yjn_A 331 ALLPTCAATVHHGGPGSWHTAAIHGVPQVILP--DGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRA 408 (441)
T ss_dssp HHGGGCSEEEECCCHHHHHHHHHTTCCEEECC--CSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeC--CcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHH
Confidence 89999999999999999999999999999999 5789999999999999999999888899999999999998763221
Q ss_pred ---------CCCCHHHHHHHHHHHHHcc
Q 002206 355 ---------GGINGGEVAAHILQETAIG 373 (953)
Q Consensus 355 ---------~~~~g~~~~A~~i~~~l~~ 373 (953)
...+++.++++.|++++..
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 409 GAARMRDDMLAEPSPAEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 4678899999999887643
No 28
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.92 E-value=4.6e-24 Score=248.57 Aligned_cols=342 Identities=13% Similarity=0.111 Sum_probs=197.2
Q ss_pred eEEEEEEecCCCcchHHHHHHHHHHHHHCCCcE--EEEeCCC--CcccccccC--CCceeeeeecccCCcccccccccCh
Q 002206 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDV--HVVTGAP--DFVFTSEIQ--SPRLFIRKVLLDCGAVQADALTVDR 88 (953)
Q Consensus 15 ~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeV--t~is~~~--~~~~~~~i~--~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (953)
+.+|++ ++.++.||++++++||+.|+++||+| ||++... ......... .+.+.+... ..++........+.
T Consensus 7 ~~hvv~-~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i--~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 7 NPHVAV-LAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDI--SDGVPEGYVFAGRP 83 (456)
T ss_dssp CCEEEE-ECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEEC--CCCCCTTCCCCCCT
T ss_pred CCEEEE-EcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeC--CCCCCCcccccCCh
Confidence 345543 58899999999999999999998776 5665521 000000000 023333332 11221100000011
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHH-HHH--cCCCcEEEECC-CchHHHHHHHhCCcEEEEecCChhH----H-H---HHH
Q 002206 89 LASLEKYSETAVAPRKSILKDEVE-WLN--SIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDF----I-Y---AEY 156 (953)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~L~--~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~~----~-~---~~~ 156 (953)
......+.... ...+.+.++ ++. ..+||+||+|. ..++..+|+++|||.|.+....... . + ...
T Consensus 84 ~~~~~~~~~~~----~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
T 2c1x_A 84 QEDIELFTRAA----PESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREK 159 (456)
T ss_dssp THHHHHHHHHH----HHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHh----HHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhc
Confidence 11111111110 111112222 222 36899999997 5678889999999999886554110 0 0 000
Q ss_pred Hh----------------hhc--------c-----c----hHHHHHHHHhhccccceEEecCCCC---C-----CCCCCc
Q 002206 157 VM----------------AAG--------H-----H----HRSIVWQIAEDYSHCEFLIRLPGYC---P-----MPAFRD 195 (953)
Q Consensus 157 ~~----------------~~~--------~-----~----~~~~~~~l~~~~~~~~~l~~~~~~~---~-----~p~~~~ 195 (953)
.. ... . . +..+..........++.++.-++.. + ++.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~ 239 (456)
T 2c1x_A 160 IGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKT 239 (456)
T ss_dssp HCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSC
T ss_pred cCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCC
Confidence 00 000 0 0 0001111111223334333222211 1 233468
Q ss_pred eeecCcccc-cCCC-Ch--HHHHHHhCCCCCCcEEEEEcCCCCch-H----hHHHhhCCCCcE-EEEeCCCCC-CC----
Q 002206 196 VIDVPLVVR-RLHK-SR--KEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWK-CLVCGASDS-QL---- 260 (953)
Q Consensus 196 v~~vg~~~~-~~~~-~~--~e~~~~l~~~~~~~vVlvs~Gs~~~~-~----~ll~~ll~~~~~-~vv~G~~~~-~l---- 260 (953)
++.|||... .+.. .+ .++.++++..+++++|||++||.+.. . ++..++...++. ++++|.... .+
T Consensus 240 ~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~ 319 (456)
T 2c1x_A 240 YLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF 319 (456)
T ss_dssp EEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH
T ss_pred EEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH
Confidence 899999443 2211 12 34678887766789999999998752 2 223333323443 345564321 12
Q ss_pred ----CCCeEECCCCCCHHHHHh--hcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-CcEEEEecCC
Q 002206 261 ----PPNFIKLPKDAYTPDFMA--ASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRD 333 (953)
Q Consensus 261 ----p~NV~v~~~~~~~pdlLa--~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~-G~g~~l~~~d 333 (953)
++|+++.+|.+. .++|+ ++|+||||||+||++|++++|||+|++| .+.||+.||+++++. |+|+.+...+
T Consensus 320 ~~~~~~~~~v~~w~pq-~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P--~~~dQ~~Na~~l~~~~g~g~~l~~~~ 396 (456)
T 2c1x_A 320 LEKTRGYGMVVPWAPQ-AEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP--FFGDQRLNGRMVEDVLEIGVRIEGGV 396 (456)
T ss_dssp HHHHTTTEEEESCCCH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHHTSCCEEECGGGS
T ss_pred HhhcCCceEEecCCCH-HHHhcCCcCCEEEecCCcchHHHHHHhCceEEecC--ChhhHHHHHHHHHHHhCeEEEecCCC
Confidence 568888664432 28998 5899999999999999999999999999 689999999999999 9999998888
Q ss_pred CChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 334 LLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 334 l~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
++.+.+.++|++++++++ ....++.|..+.+.+
T Consensus 397 ~~~~~l~~~i~~ll~~~~-----~~~~r~~a~~l~~~~ 429 (456)
T 2c1x_A 397 FTKSGLMSCFDQILSQEK-----GKKLRENLRALRETA 429 (456)
T ss_dssp CCHHHHHHHHHHHHHSHH-----HHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHHHH
Confidence 999999999999997651 123455555555554
No 29
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.92 E-value=6.7e-24 Score=243.14 Aligned_cols=318 Identities=17% Similarity=0.125 Sum_probs=175.6
Q ss_pred ceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCc---------cccccc
Q 002206 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGA---------VQADAL 84 (953)
Q Consensus 14 ~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~---------~~~~~~ 84 (953)
..|+|+|++ .++.||++++++|+++|+++||+|+|+++.. +.+.+...++.+.+...+... ......
T Consensus 14 ~~MrIl~~~-~~~~gh~~~~~~La~~L~~~GheV~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 4fzr_A 14 SHMRILVIA-GCSEGFVMPLVPLSWALRAAGHEVLVAASEN---MGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTM 89 (398)
T ss_dssp -CCEEEEEC-CSSHHHHGGGHHHHHHHHHTTCEEEEEEEGG---GHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCC
T ss_pred CceEEEEEc-CCCcchHHHHHHHHHHHHHCCCEEEEEcCHH---HHHHHHhCCCeeEecCCccchHhhhhhhccCccccc
Confidence 346776654 5589999999999999999999999998632 111111011122211100000 000000
Q ss_pred ccChHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecC-C-hhHHHHHHHhhhc
Q 002206 85 TVDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNF-S-WDFIYAEYVMAAG 161 (953)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~-~-~~~~~~~~~~~~~ 161 (953)
.......+.....++............+.+++++||+||+|. .+++..+|+.+++|+|.+... . +.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~----- 164 (398)
T 4fzr_A 90 PREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSAG----- 164 (398)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHHH-----
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHHH-----
Confidence 001111111111111111223344556778889999999986 677888899999999887432 1 11111110
Q ss_pred cchHHHHHHHHhhcc-----ccceEEe-cCCCCCCCCCC---ceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCC
Q 002206 162 HHHRSIVWQIAEDYS-----HCEFLIR-LPGYCPMPAFR---DVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGG 232 (953)
Q Consensus 162 ~~~~~~~~~l~~~~~-----~~~~l~~-~~~~~~~p~~~---~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs 232 (953)
..++...+ ..+. ..+..+. .+.....+..+ .+..+|.. ..+.++.+++..++++++||+++|+
T Consensus 165 --~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~v~~G~ 236 (398)
T 4fzr_A 165 --VGELAPEL-AELGLTDFPDPLLSIDVCPPSMEAQPKPGTTKMRYVPYN-----GRNDQVPSWVFEERKQPRLCLTFGT 236 (398)
T ss_dssp --HHHTHHHH-HTTTCSSCCCCSEEEECSCGGGC----CCCEECCCCCCC-----CSSCCCCHHHHSCCSSCEEECC---
T ss_pred --HHHHHHHH-HHcCCCCCCCCCeEEEeCChhhCCCCCCCCCCeeeeCCC-----CCCCCCchhhhcCCCCCEEEEEccC
Confidence 01111111 1111 1122221 11111111000 01111110 0111222333333467899999999
Q ss_pred CCc---------h----HhHHHhhCCCCcEEEEe-CCCCC----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHH
Q 002206 233 QPA---------G----WKLKEEYLPSGWKCLVC-GASDS----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSE 294 (953)
Q Consensus 233 ~~~---------~----~~ll~~ll~~~~~~vv~-G~~~~----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~E 294 (953)
... . ..+++.+...++.+++. |.... .+++||++.+|.+ ++++|++||+||+|||++|++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~-~~~ll~~ad~~v~~gG~~t~~E 315 (398)
T 4fzr_A 237 RVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFP-LSAIMPACDVVVHHGGHGTTLT 315 (398)
T ss_dssp -------------CCSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCC-HHHHGGGCSEEEECCCHHHHHH
T ss_pred cccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCC-HHHHHhhCCEEEecCCHHHHHH
Confidence 842 1 12333443346666655 33221 2689999999874 6799999999999999999999
Q ss_pred HHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 295 ALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 295 al~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
|+++|+|+|++| .+.||+.|++++++.|+|+.+...+++++.|.++|.++++++.
T Consensus 316 a~~~G~P~v~~p--~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~ 370 (398)
T 4fzr_A 316 CLSEGVPQVSVP--VIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSS 370 (398)
T ss_dssp HHHTTCCEEECC--CSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTH
T ss_pred HHHhCCCEEecC--CchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHH
Confidence 999999999999 5789999999999999999999888888999999999998873
No 30
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.92 E-value=9.2e-24 Score=248.19 Aligned_cols=346 Identities=11% Similarity=0.072 Sum_probs=201.2
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccC------CCceeeeeecccCCcccccccc
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ------SPRLFIRKVLLDCGAVQADALT 85 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~-~~~~~i~------~~~~~~~~~~~~~g~~~~~~~~ 85 (953)
|++.+|++ ++.++.||+++++.|+++|++|||+|||+++.... ....... .+.+.+.... + ++.... ..
T Consensus 6 ~~~~~vl~-~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-~-~lp~~~-~~ 81 (482)
T 2pq6_A 6 NRKPHVVM-IPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-D-GLTPME-GD 81 (482)
T ss_dssp --CCEEEE-ECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-C-CCC------
T ss_pred CCCCEEEE-ecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-C-CCCCcc-cc
Confidence 44556655 57899999999999999999999999999764210 0111000 0234444321 1 211100 00
Q ss_pred cChHHHHHHHHHHhhccHHHHHHHHHHHHHc----CCCcEEEECC-CchHHHHHHHhCCcEEEEecCChhH--H---HHH
Q 002206 86 VDRLASLEKYSETAVAPRKSILKDEVEWLNS----IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDF--I---YAE 155 (953)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~~--~---~~~ 155 (953)
.+....+..+...........+.+.++.++. .+||+||+|. .+++..+|+++|||.|.+....... . +..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 161 (482)
T 2pq6_A 82 GDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRS 161 (482)
T ss_dssp ----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHH
T ss_pred cCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHH
Confidence 0000001111111111122233444455542 5899999997 6788889999999999986544210 0 000
Q ss_pred -----HHhhhc---------cc----h---------------------HHHHHH---HHhhccccceEEecCCC---CC-
Q 002206 156 -----YVMAAG---------HH----H---------------------RSIVWQ---IAEDYSHCEFLIRLPGY---CP- 189 (953)
Q Consensus 156 -----~~~~~~---------~~----~---------------------~~~~~~---l~~~~~~~~~l~~~~~~---~~- 189 (953)
+.+... +. + ...... .......++.++.-+.. .+
T Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 162 FVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 100000 00 0 000000 01111223333322211 11
Q ss_pred ----CCCCCceeecCcccc--cCC-----------C---ChHHHHHHhCCCCCCcEEEEEcCCCCc-h-H---hHHHhhC
Q 002206 190 ----MPAFRDVIDVPLVVR--RLH-----------K---SRKEVRKELGIEDDVKLLILNFGGQPA-G-W---KLKEEYL 244 (953)
Q Consensus 190 ----~p~~~~v~~vg~~~~--~~~-----------~---~~~e~~~~l~~~~~~~vVlvs~Gs~~~-~-~---~ll~~ll 244 (953)
++.+++++.|||... ... . ...++.+|++..+++++|||++||.+. . . ++..++.
T Consensus 242 ~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 242 INALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 344578999999432 111 1 112467888866678899999999875 2 1 2333443
Q ss_pred CCCcEEE-EeCCCC--------CC-----CCCCeEECCCCCCHHHHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCC
Q 002206 245 PSGWKCL-VCGASD--------SQ-----LPPNFIKLPKDAYTPDFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRD 308 (953)
Q Consensus 245 ~~~~~~v-v~G~~~--------~~-----lp~NV~v~~~~~~~pdlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~ 308 (953)
..++.++ +++... +. +++|+++.+|.+.+ ++|+| +++||||||+||++|++++|||+|++|
T Consensus 322 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~-~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P-- 398 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD-KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP-- 398 (482)
T ss_dssp HTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC--
T ss_pred hcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH-HHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC--
Confidence 4456554 445321 11 35789986644422 78976 667999999999999999999999999
Q ss_pred CCCchHHHHHHHH-HcCcEEEEecCCCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 309 YFNEEPFLRNMLE-FYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 309 ~~~DQ~~NA~~l~-~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
.+.||+.||++++ +.|+|+.+. .+++++.+.++|++++.+++ ....++.|..|.+.+
T Consensus 399 ~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~~~-----~~~~r~~a~~l~~~~ 456 (482)
T 2pq6_A 399 FFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGDK-----GKKMKQKAMELKKKA 456 (482)
T ss_dssp CSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSHH-----HHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcCCc-----HHHHHHHHHHHHHHH
Confidence 6789999999997 799999998 68899999999999997651 123555556565554
No 31
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.91 E-value=2.3e-23 Score=238.81 Aligned_cols=331 Identities=14% Similarity=0.095 Sum_probs=192.5
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCccc---c----c------
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQ---A----D------ 82 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~---~----~------ 82 (953)
|+|+|++ .++.||++++++|+++|+++||+|+|+++ . + .+.+...++.+.+...+..+.. . .
T Consensus 21 MrIl~~~-~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~-~--~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (398)
T 3oti_A 21 MRVLFVS-SPGIGHLFPLIQLAWGFRTAGHDVLIAVA-E-H--ADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAET 95 (398)
T ss_dssp CEEEEEC-CSSHHHHGGGHHHHHHHHHTTCEEEEEES-S-C--HHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHT
T ss_pred CEEEEEc-CCCcchHhHHHHHHHHHHHCCCEEEEecc-c-h--HHHHHhCCCeeEecCCccCHHHHhhhcccCCcccccc
Confidence 5676654 45899999999999999999999999988 3 1 1212112233333211100000 0 0
Q ss_pred ---ccccChHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEec-CChhHHHHHHH
Q 002206 83 ---ALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTN-FSWDFIYAEYV 157 (953)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~-~~~~~~~~~~~ 157 (953)
............+... .........+.+++++||+||+|. .+++..+|+.+++|+|.+.. +.....+....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~ 171 (398)
T 3oti_A 96 VATRPAIDLEEWGVQIAAV----NRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGMHRSI 171 (398)
T ss_dssp GGGSCCCSGGGGHHHHHHH----HGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTHHHHH
T ss_pred ccCChhhhHHHHHHHHHHH----HHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccchhhHH
Confidence 0000000001111111 112345556778889999999986 66688889999999987632 11110000000
Q ss_pred hhhccchHHHHHHHHhhccccceEEe-cCCCCCCCC---CCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCC
Q 002206 158 MAAGHHHRSIVWQIAEDYSHCEFLIR-LPGYCPMPA---FRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQ 233 (953)
Q Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~l~~-~~~~~~~p~---~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~ 233 (953)
. .......+.+.......+..+. .+.....+. ...+..++. ..+.....++...+++++||+++|+.
T Consensus 172 ~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~v~~G~~ 242 (398)
T 3oti_A 172 A---SFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPY------GGGAVLGDRLPPVPARPEVAITMGTI 242 (398)
T ss_dssp H---TTCHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCCSBCCCCCCC------CCCEECCSSCCCCCSSCEEEECCTTT
T ss_pred H---HHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCCCCCccccCC------CCCcCCchhhhcCCCCCEEEEEcCCC
Confidence 0 0011111111000111121221 111111110 000111110 01111222344345778999999998
Q ss_pred Cch-------HhHHHhhCCCCcEEEEe-CCCCC----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCc
Q 002206 234 PAG-------WKLKEEYLPSGWKCLVC-GASDS----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLP 301 (953)
Q Consensus 234 ~~~-------~~ll~~ll~~~~~~vv~-G~~~~----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP 301 (953)
... ..+++.+...++.+++. |.... .+++||++.+|. .++++|++||+||+|||++|++||+++|+|
T Consensus 243 ~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~-~~~~ll~~ad~~v~~~G~~t~~Eal~~G~P 321 (398)
T 3oti_A 243 ELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWT-PLHTLLRTCTAVVHHGGGGTVMTAIDAGIP 321 (398)
T ss_dssp HHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSC-CHHHHHTTCSEEEECCCHHHHHHHHHHTCC
T ss_pred ccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccC-CHHHHHhhCCEEEECCCHHHHHHHHHhCCC
Confidence 431 12333443446766554 44332 268999999988 578999999999999999999999999999
Q ss_pred EEEEeCCCCCchHHHH--HHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHH
Q 002206 302 FVFVRRDYFNEEPFLR--NMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQET 370 (953)
Q Consensus 302 ~l~iP~~~~~DQ~~NA--~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~ 370 (953)
+|++| .+.||..|+ +++++.|+|+.++..+++++.+. ++++++.... ...+++.++++.|+++
T Consensus 322 ~v~~p--~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 395 (398)
T 3oti_A 322 QLLAP--DPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREVREEMVALPTPAETVRRIVER 395 (398)
T ss_dssp EEECC--CTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred EEEcC--CCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99999 578999999 99999999999998887765555 7777663221 3667888888888876
Q ss_pred H
Q 002206 371 A 371 (953)
Q Consensus 371 l 371 (953)
+
T Consensus 396 ~ 396 (398)
T 3oti_A 396 I 396 (398)
T ss_dssp H
T ss_pred h
Confidence 4
No 32
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.90 E-value=1.2e-22 Score=235.19 Aligned_cols=344 Identities=15% Similarity=0.073 Sum_probs=200.4
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccC--CcccccccccChHH
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDC--GAVQADALTVDRLA 90 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~--g~~~~~~~~~~~~~ 90 (953)
|+.++|+++ +.++.||+.++++|+++|+++||+|+++++... ...+...++.+.+..... +.........+...
T Consensus 5 m~m~kIl~~-~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (430)
T 2iyf_A 5 TTPAHIAMF-SIAAHGHVNPSLEVIRELVARGHRVTYAIPPVF---ADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLD 80 (430)
T ss_dssp ---CEEEEE-CCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGG---HHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHH
T ss_pred cccceEEEE-eCCCCccccchHHHHHHHHHCCCeEEEEeCHHH---HHHHHhCCCEEEEcCCcCccccccccccchhhHH
Confidence 444577664 678899999999999999999999999987532 111111223332211110 11000000011111
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCCh--hHHHH----HHHhhh--c
Q 002206 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW--DFIYA----EYVMAA--G 161 (953)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~--~~~~~----~~~~~~--~ 161 (953)
.+..+.. ..........+.+++++||+||+|+ .+++..+|+.+|||+|.+....+ ..+.. .+.... .
T Consensus 81 ~~~~~~~----~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (430)
T 2iyf_A 81 NVEPFLN----DAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQT 156 (430)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHHHHS
T ss_pred HHHHHHH----HHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhhhccc
Confidence 1111111 1122344556777889999999997 46788889999999998864321 11100 000000 0
Q ss_pred cchHHH---HHHHHhhc----------cccceEEecCC-CC--C-CCCCCc-eeecCcccccCCCChHHHHHHhCCCCCC
Q 002206 162 HHHRSI---VWQIAEDY----------SHCEFLIRLPG-YC--P-MPAFRD-VIDVPLVVRRLHKSRKEVRKELGIEDDV 223 (953)
Q Consensus 162 ~~~~~~---~~~l~~~~----------~~~~~l~~~~~-~~--~-~p~~~~-v~~vg~~~~~~~~~~~e~~~~l~~~~~~ 223 (953)
.....+ ...+...+ ...+..+.... .. + .+..++ ++.+|+...... +..++....+++
T Consensus 157 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~~~~~~~----~~~~~~~~~~~~ 232 (430)
T 2iyf_A 157 ERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDRA----EEGGWQRPAGAE 232 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC---------CCCCCCCTTCS
T ss_pred hHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCCcCCCCC----CCCCCccccCCC
Confidence 000000 11111111 12233332211 11 1 011134 777875221100 000122112467
Q ss_pred cEEEEEcCCCCch-Hh----HHHhhCC-CCcEE-EEeCCCCC-----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhH
Q 002206 224 KLLILNFGGQPAG-WK----LKEEYLP-SGWKC-LVCGASDS-----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGT 291 (953)
Q Consensus 224 ~vVlvs~Gs~~~~-~~----ll~~ll~-~~~~~-vv~G~~~~-----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~T 291 (953)
++||+++|+.... .+ +++.+.. +++.+ +++|.... .+++||++.+|.+.+ ++|+++|+||+|+|++|
T Consensus 233 ~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~-~~l~~ad~~v~~~G~~t 311 (430)
T 2iyf_A 233 KVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQL-AILRQADLFVTHAGAGG 311 (430)
T ss_dssp EEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHH-HHHTTCSEEEECCCHHH
T ss_pred CeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHH-HHhhccCEEEECCCccH
Confidence 7999999998731 22 2333433 36665 46676431 267899998887765 89999999999999999
Q ss_pred HHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHH
Q 002206 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEV 362 (953)
Q Consensus 292 v~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~ 362 (953)
++||+++|+|+|++| ...||..|++++++.|+|+.+...+++++.|.++|.++++++.... ...++..+
T Consensus 312 ~~Ea~~~G~P~i~~p--~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 389 (430)
T 2iyf_A 312 SQEGLATATPMIAVP--QAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRR 389 (430)
T ss_dssp HHHHHHTTCCEEECC--CSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHhCCCEEECC--CccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHH
Confidence 999999999999999 4679999999999999999998888888999999999998763221 23457777
Q ss_pred HHHHHHHHH
Q 002206 363 AAHILQETA 371 (953)
Q Consensus 363 ~A~~i~~~l 371 (953)
+++.|++++
T Consensus 390 ~~~~i~~~~ 398 (430)
T 2iyf_A 390 AADLIEAEL 398 (430)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHh
Confidence 777777664
No 33
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.90 E-value=1.9e-22 Score=235.57 Aligned_cols=337 Identities=12% Similarity=0.074 Sum_probs=198.9
Q ss_pred ceEEEEEEecCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCCCcc--cccccC-----CCceeeeeecccCCccccccc
Q 002206 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFV--FTSEIQ-----SPRLFIRKVLLDCGAVQADAL 84 (953)
Q Consensus 14 ~~l~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~~~~--~~~~i~-----~~~~~~~~~~~~~g~~~~~~~ 84 (953)
++++|++ ++.++.||+++++.||+.|+++ ||+|||++...... ....+. .+.+.+.... .+... +..
T Consensus 8 ~~~~vv~-~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp--~~~~~-~~~ 83 (463)
T 2acv_A 8 KNSELIF-IPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLP--EVEPP-PQE 83 (463)
T ss_dssp HCEEEEE-ECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECC--CCCCC-CGG
T ss_pred CCCEEEE-EcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECC--CCCCC-ccc
Confidence 4566654 5889999999999999999999 99999997753210 111110 1344444421 11110 100
Q ss_pred ccChHHHHHHHHHHhhccHHHHHHHHHHHHHc---CCCcEEEECC-CchHHHHHHHhCCcEEEEecCChh--HHHHHHH-
Q 002206 85 TVDRLASLEKYSETAVAPRKSILKDEVEWLNS---IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAEYV- 157 (953)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~---~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~--~~~~~~~- 157 (953)
........ +.... ........+++++ .+||+||+|. ..++..+|+++|||.+.+...... ..+..+.
T Consensus 84 ~~~~~~~~--~~~~~----~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 157 (463)
T 2acv_A 84 LLKSPEFY--ILTFL----ESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN 157 (463)
T ss_dssp GGGSHHHH--HHHHH----HHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGG
T ss_pred ccCCccHH--HHHHH----HhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHh
Confidence 00001111 11111 1112222344444 6899999997 667788999999998887543311 1111000
Q ss_pred -------------------hhh-cc----chH-HHH------HHH---HhhccccceEEecCCCC------------CCC
Q 002206 158 -------------------MAA-GH----HHR-SIV------WQI---AEDYSHCEFLIRLPGYC------------PMP 191 (953)
Q Consensus 158 -------------------~~~-~~----~~~-~~~------~~l---~~~~~~~~~l~~~~~~~------------~~p 191 (953)
+.. .. .+. .+. ..+ ...+..++.++..++.. ..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p 237 (463)
T 2acv_A 158 RQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEK 237 (463)
T ss_dssp SCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTT
T ss_pred hcccCCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcccc
Confidence 000 00 000 000 000 11122233222211110 012
Q ss_pred CCCceeecCcccccC--C------CChHHHHHHhCCCCCCcEEEEEcCCCC-c-hH----hHHHhhCCCCcEEE-EeCCC
Q 002206 192 AFRDVIDVPLVVRRL--H------KSRKEVRKELGIEDDVKLLILNFGGQP-A-GW----KLKEEYLPSGWKCL-VCGAS 256 (953)
Q Consensus 192 ~~~~v~~vg~~~~~~--~------~~~~e~~~~l~~~~~~~vVlvs~Gs~~-~-~~----~ll~~ll~~~~~~v-v~G~~ 256 (953)
.++++.|||..... . ..+.++.+|++..+++++|||++||++ . .. ++...+...++.++ ++|..
T Consensus 238 -~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 316 (463)
T 2acv_A 238 -IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE 316 (463)
T ss_dssp -SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred -CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 46789999954322 1 123577888887667899999999998 4 21 23333433445444 55653
Q ss_pred ---C-CC----C--CCCeEECCCCCCHHHHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH-HHc
Q 002206 257 ---D-SQ----L--PPNFIKLPKDAYTPDFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML-EFY 323 (953)
Q Consensus 257 ---~-~~----l--p~NV~v~~~~~~~pdlLa~--aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l-~~~ 323 (953)
. .. . ++|+++.+|.+.+ ++|+| +|+||||||+||++|++++|||+|++| .+.||+.||+++ ++.
T Consensus 317 ~~~l~~~~~~~~~~~~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P--~~~dQ~~Na~~lv~~~ 393 (463)
T 2acv_A 317 KKVFPEGFLEWMELEGKGMICGWAPQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWP--IYAEQQLNAFRLVKEW 393 (463)
T ss_dssp GGGSCTTHHHHHHHHCSEEEESSCCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECC--CSTTHHHHHHHHHHTS
T ss_pred cccCChhHHHhhccCCCEEEEccCCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeecc--chhhhHHHHHHHHHHc
Confidence 1 11 2 5688886544322 78874 999999999999999999999999999 689999999995 899
Q ss_pred CcEEEE-e---cC--CCChhhHHHHHHHHHhCCCCccCCCCHHHHHHHHHHHHH
Q 002206 324 QGGVEM-I---RR--DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (953)
Q Consensus 324 G~g~~l-~---~~--dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~A~~i~~~l 371 (953)
|+|+.+ + .. +++.+.+.++|++++++. ...++.|..|.+.+
T Consensus 394 g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~-------~~~r~~a~~l~~~~ 440 (463)
T 2acv_A 394 GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD-------SIVHKKVQEMKEMS 440 (463)
T ss_dssp CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT-------CTHHHHHHHHHHHH
T ss_pred CeEEEEecccCCCCccccHHHHHHHHHHHHhcc-------HHHHHHHHHHHHHH
Confidence 999999 3 34 678899999999999532 23455555555543
No 34
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.90 E-value=1.3e-22 Score=231.18 Aligned_cols=335 Identities=11% Similarity=0.010 Sum_probs=198.1
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccC--Cccccc--cc--cc-ChH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDC--GAVQAD--AL--TV-DRL 89 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~--g~~~~~--~~--~~-~~~ 89 (953)
+|+++ +.++.||+.++++|+++|+++||+|+|++.... ...+...++.+.....+. +..... .. .. ...
T Consensus 2 rIl~~-~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (384)
T 2p6p_A 2 RILFV-AAGSPATVFALAPLATAARNAGHQVVMAANQDM---GPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDP 77 (384)
T ss_dssp EEEEE-CCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGG---HHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSH
T ss_pred EEEEE-eCCccchHhHHHHHHHHHHHCCCEEEEEeCHHH---HHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcch
Confidence 56654 677899999999999999999999999987431 111111112222211110 000000 00 00 000
Q ss_pred HHHHHH-HHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCC-hhHHHHHHHhhhccchHH
Q 002206 90 ASLEKY-SETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WDFIYAEYVMAAGHHHRS 166 (953)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~-~~~~~~~~~~~~~~~~~~ 166 (953)
.....+ ..+..........+..+.+++++||+||+|. .+++..+|+.+|+|+|.+.... +...+..... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~~-------~ 150 (384)
T 2p6p_A 78 VAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDADGIHPGAD-------A 150 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCTTTHHHHH-------H
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcccchhhHHHH-------H
Confidence 111111 1111001112344456677888999999996 6677788999999999874211 1000000000 0
Q ss_pred HHHHHHhhcc--c---cceEEe-cCCCCCCC-CCC--ceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch-
Q 002206 167 IVWQIAEDYS--H---CEFLIR-LPGYCPMP-AFR--DVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG- 236 (953)
Q Consensus 167 ~~~~l~~~~~--~---~~~l~~-~~~~~~~p-~~~--~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~- 236 (953)
...++...+. . .+..+. .+.....+ ..+ ++..+|.. .+ .+..+++...+++++||+++||.+..
T Consensus 151 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 224 (384)
T 2p6p_A 151 ELRPELSELGLERLPAPDLFIDICPPSLRPANAAPARMMRHVATS--RQ----CPLEPWMYTRDTRQRVLVTSGSRVAKE 224 (384)
T ss_dssp HTHHHHHHTTCSSCCCCSEEEECSCGGGSCTTSCCCEECCCCCCC--CC----CBCCHHHHCCCSSCEEEEECSSSSSCC
T ss_pred HHHHHHHHcCCCCCCCCCeEEEECCHHHCCCCCCCCCceEecCCC--CC----CCCCchhhcCCCCCEEEEECCCCCccc
Confidence 0111111111 1 222222 11111000 011 12222211 01 11223333334568999999998642
Q ss_pred ---------HhHHHhhCCCCcEEEE-eCCCCC----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcE
Q 002206 237 ---------WKLKEEYLPSGWKCLV-CGASDS----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPF 302 (953)
Q Consensus 237 ---------~~ll~~ll~~~~~~vv-~G~~~~----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~ 302 (953)
..+++++...++.+++ +|.... .+++||.+ +|.+ +.++|++||+||+|||++|++||+++|+|+
T Consensus 225 ~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~-~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~ 302 (384)
T 2p6p_A 225 SYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTP-LDVVAPTCDLLVHHAGGVSTLTGLSAGVPQ 302 (384)
T ss_dssp SSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEE-ECCC-HHHHGGGCSEEEECSCTTHHHHHHHTTCCE
T ss_pred cccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEE-cCCC-HHHHHhhCCEEEeCCcHHHHHHHHHhCCCE
Confidence 1233444444666665 453211 15789999 8875 579999999999999999999999999999
Q ss_pred EEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHHHc
Q 002206 303 VFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETAI 372 (953)
Q Consensus 303 l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l~ 372 (953)
|++| .+.||..|++++++.|+|+.+...+++++.+.++|+++++++.... ...+|+.+++++|+.++.
T Consensus 303 v~~p--~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 303 LLIP--KGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGMPLPATVVTALEQLAH 379 (384)
T ss_dssp EECC--CSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred EEcc--CcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence 9999 5789999999999999999998888888999999999998763221 466788888888888753
No 35
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.90 E-value=4.6e-23 Score=235.36 Aligned_cols=340 Identities=12% Similarity=0.062 Sum_probs=195.4
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeee-cccCCc---cc-----c-cccc
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKV-LLDCGA---VQ-----A-DALT 85 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~-~~~~g~---~~-----~-~~~~ 85 (953)
|+|+|++ .++.||++++++|+++|+++||+|+|++... ..+.+...++.+... ..+... .. . ....
T Consensus 2 MrIl~~~-~~~~gh~~~~~~la~~L~~~GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (391)
T 3tsa_A 2 MRVLVVP-LPYPTHLMAMVPLCWALQASGHEVLIAAPPE---LQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFG 77 (391)
T ss_dssp CEEEEEC-CSCHHHHHTTHHHHHHHHHTTCEEEEEECHH---HHHHHHHBTCEEEEC--------------CCSCCGGGG
T ss_pred cEEEEEc-CCCcchhhhHHHHHHHHHHCCCEEEEecChh---hHHHHHhCCCceeeecCCccchhhhhhhcccccccccc
Confidence 5777654 4589999999999999999999999998632 111110011111111 000000 00 0 0000
Q ss_pred -cChHHHHHHHHHHhh---ccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecCChhHHHHHHHhhh
Q 002206 86 -VDRLASLEKYSETAV---APRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAA 160 (953)
Q Consensus 86 -~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~ 160 (953)
.........+..... ...........+.+++++||+||+|. .+.+..+|+.+|||+|.+...... ....+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~-~~~~~~~~- 155 (391)
T 3tsa_A 78 QRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP-TAGPFSDR- 155 (391)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC-TTTHHHHH-
T ss_pred cccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc-ccccccch-
Confidence 000000111111100 00011145557778889999999996 666778889999999887422110 00000000
Q ss_pred ccchHHHHHHHHhh-cc---ccceEEec-CCCCCCCC--C-CceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCC
Q 002206 161 GHHHRSIVWQIAED-YS---HCEFLIRL-PGYCPMPA--F-RDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGG 232 (953)
Q Consensus 161 ~~~~~~~~~~l~~~-~~---~~~~l~~~-~~~~~~p~--~-~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs 232 (953)
...++...+... +. ..+..+.. +.+...+. . ..+..+|. ..+....+++...+++++|++++|+
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~vlv~~G~ 227 (391)
T 3tsa_A 156 --AHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPY------NGSGAFPAWGAARTSARRVCICMGR 227 (391)
T ss_dssp --HHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCCCC------CCCEECCGGGSSCCSSEEEEEECCH
T ss_pred --HHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeeecC------CCCcCCCchhhcCCCCCEEEEEcCC
Confidence 011122222111 11 11222221 11111110 0 00111211 0111112344434577899999998
Q ss_pred CCc---h-HhHHHh---hCC-CCcEEEEeCCCC-----CCCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcC
Q 002206 233 QPA---G-WKLKEE---YLP-SGWKCLVCGASD-----SQLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYK 299 (953)
Q Consensus 233 ~~~---~-~~ll~~---ll~-~~~~~vv~G~~~-----~~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~G 299 (953)
... . ..++.. ... +++.+++.+... ..+++|+++.+|.+ ++++|++||+||+|||++|++||+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~-~~~ll~~ad~~v~~~G~~t~~Ea~~~G 306 (391)
T 3tsa_A 228 MVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPDNARIAESVP-LNLFLRTCELVICAGGSGTAFTATRLG 306 (391)
T ss_dssp HHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCC-GGGTGGGCSEEEECCCHHHHHHHHHTT
T ss_pred CCCcccchHHHHHHHHHhccCCCeEEEEEECCcchhhcccCCCCEEEeccCC-HHHHHhhCCEEEeCCCHHHHHHHHHhC
Confidence 743 1 222222 122 366666554322 12688999988765 458899999999999999999999999
Q ss_pred CcEEEEeCCCCCchHHHHHHHHHcCcEEEEec--CCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHH
Q 002206 300 LPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIR--RDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQ 368 (953)
Q Consensus 300 vP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~--~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~ 368 (953)
+|+|++| .+.||+.|++.+++.|+|+.+.. .+.+++.|.++|.++++++.... ...+++.++++.|+
T Consensus 307 ~P~v~~p--~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (391)
T 3tsa_A 307 IPQLVLP--QYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLE 384 (391)
T ss_dssp CCEEECC--CSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCEEecC--CcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 9999999 57899999999999999999988 77888999999999998874321 36678888888888
Q ss_pred HHHc
Q 002206 369 ETAI 372 (953)
Q Consensus 369 ~~l~ 372 (953)
+++.
T Consensus 385 ~~~~ 388 (391)
T 3tsa_A 385 NTAA 388 (391)
T ss_dssp HC--
T ss_pred HHHh
Confidence 7643
No 36
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A*
Probab=99.90 E-value=3.9e-23 Score=224.15 Aligned_cols=167 Identities=14% Similarity=0.155 Sum_probs=131.4
Q ss_pred ceEEEEcCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCc
Q 002206 496 EIFVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSE 570 (953)
Q Consensus 496 ~~~~~~APGrv~l----~GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~ 570 (953)
+++.++||||||| .|+|.| |++..++.++|+++.++ +++ +.++ .+..
T Consensus 3 ~m~~~~aPakinl~l~v~g~r~dgyh~~~sl~~ai~l~~~v-~~~--~~~i---------------------~i~~---- 54 (271)
T 2v8p_A 3 HMIKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEI-YIR--EGVL---------------------RVET---- 54 (271)
T ss_dssp CCEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEE-EEE--ESSC---------------------EEEE----
T ss_pred ceEEEeecceEEeeEeecccCCCCCceEEEEEEEcCcccEE-EEe--CCeE---------------------EEEe----
Confidence 3678999999999 799999 99999999999999999 887 3221 2211
Q ss_pred cCCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHH
Q 002206 571 LSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSA 650 (953)
Q Consensus 571 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSA 650 (953)
+.+ ...|.|++..++..+.+..|.. .|++|.+.++||.++||||||
T Consensus 55 ------------~~~--------------------~~~~~nlv~~a~~~~~~~~g~~--~g~~i~i~~~IP~g~GLGsSs 100 (271)
T 2v8p_A 55 ------------NIG--------------------IPQEENLVYKGLREFERITGIE--INYSIFIQKNIPPGAGLGGGS 100 (271)
T ss_dssp ------------SSC--------------------CCTTTCHHHHHHHHHHHHHCCC--CCEEEEEECCSCTTSSSCHHH
T ss_pred ------------CCC--------------------CCCCchHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCCCCCchHH
Confidence 010 1246789988888777777764 689999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEE
Q 002206 651 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI 730 (953)
Q Consensus 651 A~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~ 730 (953)
|.++|++.|++.+++.++++++++++|..+|. |..++++||. .+..... +..+++++|.+++++++
T Consensus 101 a~a~a~l~al~~l~~~~l~~~el~~la~~~e~----------dv~~~~~gg~---~~~~g~g-~~~~~l~~~~~~~~vl~ 166 (271)
T 2v8p_A 101 SNLAVVLKKVNELLGSPLSEEELRELVGSISA----------DAPFFLLGKS---AIGRGKG-EVLEPVETEISGKITLV 166 (271)
T ss_dssp HHHHHHHHHHHHHTTCCSCHHHHHHHHHHHCT----------TTGGGGTCSE---EEEETTT-TEEEECCCCCCSEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC----------CHHHHhcCCe---EEEEEcC-CEEEEccCCCCcEEEEE
Confidence 99999999999999999999999999999972 7778889983 4433222 22256664448999999
Q ss_pred eCCCcccc
Q 002206 731 DSGIRHSV 738 (953)
Q Consensus 731 dsgv~~~~ 738 (953)
+++++.+|
T Consensus 167 ~p~~~~sT 174 (271)
T 2v8p_A 167 IPQVSSST 174 (271)
T ss_dssp ECSSCCCH
T ss_pred eCCCCCCH
Confidence 98876544
No 37
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.89 E-value=3.9e-22 Score=229.14 Aligned_cols=343 Identities=15% Similarity=0.117 Sum_probs=198.4
Q ss_pred eEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecc--cCCcc-------ccccc-
Q 002206 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLL--DCGAV-------QADAL- 84 (953)
Q Consensus 15 ~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~--~~g~~-------~~~~~- 84 (953)
+|+|+|+ ++.+.||+.++++|+++|+++||+|+|++... +.+.+...++.+..... ..++. .....
T Consensus 20 ~MrIl~~-~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (412)
T 3otg_A 20 HMRVLFA-SLGTHGHTYPLLPLATAARAAGHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPE 95 (412)
T ss_dssp SCEEEEE-CCSSHHHHGGGHHHHHHHHHTTCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCT
T ss_pred eeEEEEE-cCCCcccHHHHHHHHHHHHHCCCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCc
Confidence 4677665 46688999999999999999999999998742 11111111222222110 00000 00000
Q ss_pred ccChHHHHHHHHHHhhcc-HHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcEEEEecC-C-hhHHHHHHHhhh
Q 002206 85 TVDRLASLEKYSETAVAP-RKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNF-S-WDFIYAEYVMAA 160 (953)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~I~is~~-~-~~~~~~~~~~~~ 160 (953)
.......+..+..++... .........+.+++++||+||++. .+.+..+|+.+++|+|.+... . |......+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~~~~~--- 172 (412)
T 3otg_A 96 GLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLTRSIE--- 172 (412)
T ss_dssp TCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHHHHHH---
T ss_pred cCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhhHHHH---
Confidence 000011111111111101 112234556778889999999996 566777889999999887322 1 111111110
Q ss_pred ccchHHHHHHHHhh---------ccccceEEec-CCCCCCCCC-CceeecCcccccCCCChHHHHHH-hCCCCCCcEEEE
Q 002206 161 GHHHRSIVWQIAED---------YSHCEFLIRL-PGYCPMPAF-RDVIDVPLVVRRLHKSRKEVRKE-LGIEDDVKLLIL 228 (953)
Q Consensus 161 ~~~~~~~~~~l~~~---------~~~~~~l~~~-~~~~~~p~~-~~v~~vg~~~~~~~~~~~e~~~~-l~~~~~~~vVlv 228 (953)
..+...+... +..++..+.. +.....+.. ......+.... +...+.+.+++ ...++++++|++
T Consensus 173 ----~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vlv 247 (412)
T 3otg_A 173 ----EEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPV-PFAEQGDLPAWLSSRDTARPLVYL 247 (412)
T ss_dssp ----HHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCC-CCCCCCCCCGGGGGSCTTSCEEEE
T ss_pred ----HHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeecc-CCCCCCCCCCccccccCCCCEEEE
Confidence 1111111110 1122333321 111000000 00001111100 11111112223 122457789999
Q ss_pred EcCCCCch-HhH----HHhhCCCCcEEE-EeCCCC-C----CCCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHH
Q 002206 229 NFGGQPAG-WKL----KEEYLPSGWKCL-VCGASD-S----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALA 297 (953)
Q Consensus 229 s~Gs~~~~-~~l----l~~ll~~~~~~v-v~G~~~-~----~lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~ 297 (953)
++|+.... ..+ ++.+...++.++ ++|... . .+++||++.+|. .++++|++||+||+|+|++|++||++
T Consensus 248 ~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~-~~~~~l~~ad~~v~~~g~~t~~Ea~a 326 (412)
T 3otg_A 248 TLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWV-PQAALLPHVDLVVHHGGSGTTLGALG 326 (412)
T ss_dssp ECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCC-CHHHHGGGCSEEEESCCHHHHHHHHH
T ss_pred EcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCC-CHHHHHhcCcEEEECCchHHHHHHHH
Confidence 99998532 222 233333455554 445433 1 267899999998 58899999999999999999999999
Q ss_pred cCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHH
Q 002206 298 YKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQ 368 (953)
Q Consensus 298 ~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~ 368 (953)
+|+|+|++| ...||..|++.+++.|+|..+...+++++.|.++|.++++++.... ....+..++++.|+
T Consensus 327 ~G~P~v~~p--~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (412)
T 3otg_A 327 AGVPQLSFP--WAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLP 404 (412)
T ss_dssp HTCCEEECC--CSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHH
T ss_pred hCCCEEecC--CchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 999999999 4579999999999999999999888888999999999998874221 24457777777777
Q ss_pred HHHc
Q 002206 369 ETAI 372 (953)
Q Consensus 369 ~~l~ 372 (953)
+++.
T Consensus 405 ~l~~ 408 (412)
T 3otg_A 405 GFAS 408 (412)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7653
No 38
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas}
Probab=99.87 E-value=5e-22 Score=220.51 Aligned_cols=274 Identities=10% Similarity=0.058 Sum_probs=174.8
Q ss_pred ceEEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCC
Q 002206 496 EIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 575 (953)
Q Consensus 496 ~~~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 575 (953)
....++|||||+|+|+|+||.+|.++|......+.+. ....+-+ ++..+.+ +.
T Consensus 7 ~~~~~~ap~~i~l~~~~g~~~~g~~lp~~dslg~al~-~l~~~~~---------------------v~~~~~~--~~--- 59 (317)
T 2gs8_A 7 NVITVTSYANIAIIKYWGKENQAKMIPSTSSISLTLE-NMFTTTS---------------------VSFLPDT--AT--- 59 (317)
T ss_dssp CEEEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEE-EEEEEEE---------------------EEECCTT--CC---
T ss_pred CcEEEEecCcEEEEeeeeeccCCcccCCCCceEEEee-cccceEE---------------------EEEEcCC--CC---
Confidence 4678999999999999999999999988887665553 2332211 1110000 00
Q ss_pred CceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHH
Q 002206 576 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVA 655 (953)
Q Consensus 576 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va 655 (953)
..++.++. + .....|.|+++.++..+.+..+ .|++|.+.++||.++|||||||.+||
T Consensus 60 -~~~~~~~g------~------------~~~~~~~n~v~~~~~~~~~~~~----~g~~I~i~~~IP~~~GLGSSaA~~vA 116 (317)
T 2gs8_A 60 -SDQFYING------I------------LQNDEEHTKISAIIDQFRQPGQ----AFVKMETQNNMPTAAGLSSSSSGLSA 116 (317)
T ss_dssp -SCEEEETT------E------------ECCHHHHHHHHHHHTTTCCTTC----CCEEEEEECCSCGGGCCCHHHHHHHH
T ss_pred -eEEEEECC------C------------ccccchHHHHHHHHHHHHHhcC----CCeEEEEeCCCCCCCchHHHHHHHHH
Confidence 01111111 0 0113688999887765432222 58999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEE--EEEeCC
Q 002206 656 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRF--WGIDSG 733 (953)
Q Consensus 656 ~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~--vl~dsg 733 (953)
++.|++.++|.++++++|+++|..+| | +...+++||. +++..+.... ...++|.++.+ ++++++
T Consensus 117 ~~~al~~l~g~~ls~~el~~la~~~~----G------~~~~~~~GG~---~~~~~~~~~~-~~~~~~~~~~~~v~i~~~~ 182 (317)
T 2gs8_A 117 LVKACDQLFDTQLDQKALAQKAKFAS----G------SSSRSFFGPV---AAWDKDSGAI-YKVETDLKMAMIMLVLNAA 182 (317)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHH----G------GGGGGGSCSE---EEECTTTCCE-EECCCCCCEEEEEEECCCS
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHhhc----c------hhHhhhcCCh---heEeeCCCce-eEEEccccccEEEEEEECC
Confidence 99999999999999999999998774 2 3356889994 4443322221 23455556664 444665
Q ss_pred CccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcC
Q 002206 734 IRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNI 813 (953)
Q Consensus 734 v~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l 813 (953)
.++...+..|+ +. +. ..
T Consensus 183 ~~~~~tt~~~~--------------~~------------------------------------~~------------~~- 199 (317)
T 2gs8_A 183 KKPISSREGMK--------------LC------------------------------------RD------------TS- 199 (317)
T ss_dssp SCCSCHHHHHH--------------HH------------------------------------HH------------HC-
T ss_pred CcCcccHHHHH--------------HH------------------------------------hh------------cC-
Confidence 54422111110 00 00 00
Q ss_pred CccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhh-cC
Q 002206 814 PESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSA-CG 892 (953)
Q Consensus 814 p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~-~~ 892 (953)
+ ...+++.|. ..|+..++.+|.++ |++.||++|+++|..|.+ +.
T Consensus 200 ~----------------------------~~~~~~~~~---~~~~~~~~~al~~~----d~~~lg~~~~~~~~~l~~~~~ 244 (317)
T 2gs8_A 200 T----------------------------TFDQWVEQS---AIDYQHMLTYLKTN----NFEKVGQLTEANALAMHATTK 244 (317)
T ss_dssp T----------------------------THHHHHHHH---HHHHHHHHHHHHTT----CHHHHHHHHHHHHHHHHHHHT
T ss_pred H----------------------------HHHHHHHHH---HHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHHhh
Confidence 0 001122231 45788899999986 999999999999999887 44
Q ss_pred CCCchH-------HHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 893 LGSDGT-------DRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 893 vs~~~l-------d~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
.++|++ .++.+.+.++. ..|+.|+-++|+| +|+++|.++
T Consensus 245 ~~~p~~~~l~~~~~~i~~~~~~~~--------~~G~~~~~~SGaG--ptv~~l~~~ 290 (317)
T 2gs8_A 245 TANPPFSYLTKESYQAMEAVKELR--------QEGFACYFTMDAG--PNVKVLCLE 290 (317)
T ss_dssp TSSSCCCSCCHHHHHHHHHHHHHH--------HTTCCEEEECCSS--SCEEEEEEG
T ss_pred ccCCCceeEhHHHHHHHHHHHHHH--------hcCCcEEEEecCC--CeEEEEEcH
Confidence 455554 55555444321 1477888888876 888877654
No 39
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A*
Probab=99.85 E-value=6.7e-21 Score=207.49 Aligned_cols=169 Identities=14% Similarity=0.159 Sum_probs=130.7
Q ss_pred EEEEcCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l----~GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.++||||||| +|+|.| |++..++.+||+++.++.+++++++++ ++.+.
T Consensus 3 ~~~~apaKinL~L~v~g~~~dGyh~l~sl~~ai~l~~~v~v~~~~~~~i---------------------~i~~~----- 56 (283)
T 2ww4_A 3 TQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDI---------------------RLLTP----- 56 (283)
T ss_dssp EEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEEEEESSSCE---------------------EECSC-----
T ss_pred ccccCceeEEeeeeccCCCCCCCcceEEEEEECCCCcEEEEEECCCCcE---------------------EEEeC-----
Confidence 34689999999 899999 999999999999999999998765332 22110
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHh------CCCCCCCEEEEEEeCCCCCCCC
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL------GVRFEDSISMLVSSAVPEGKGV 646 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~------g~~~~~g~~i~i~s~iP~g~GL 646 (953)
. ..+ + ...|++..++..+.+.. |.. .|++|.+.++||.|+||
T Consensus 57 -----~----~~~-------------------~--~~~nlv~~a~~~~~~~~~~~~~~g~~--~g~~i~i~~~IP~g~GL 104 (283)
T 2ww4_A 57 -----V----EGV-------------------E--HEDNLIVRAARLLMKTAADSGRLPTG--SGANISIDKRLPMGGGL 104 (283)
T ss_dssp -----B----TTB-------------------C--GGGSHHHHHHHHHHHHHHHTTCSCTT--CEEEEEEECCCC-CTTS
T ss_pred -----C----CCC-------------------C--CcccHHHHHHHHHHHHhhhhcccCCC--CceEEEEEeCCCCCCCc
Confidence 0 010 0 11578888888776666 653 79999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeE
Q 002206 647 SSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIR 726 (953)
Q Consensus 647 gSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~ 726 (953)
|||||.++|++.|++.+++.++++++++++|.++|. |..++++||. .+..... +..+++++| ++.
T Consensus 105 GsSsa~~~a~l~al~~l~~~~l~~~~l~~la~~~e~----------dv~~~~~gg~---~~~~g~g-~~~~~l~~~-~~~ 169 (283)
T 2ww4_A 105 GGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGA----------DVPVFVRGHA---AFAEGVG-EILTPVDPP-EKW 169 (283)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTCT----------THHHHHHTBC---EEEETTT-TEEEECCCC-CCE
T ss_pred cHHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC----------CHHHhhcCCe---EEEEecC-ccceEcCCC-CcE
Confidence 999999999999999999999999999999998872 8888999994 3333333 223566655 789
Q ss_pred EEEEeCCCccccC
Q 002206 727 FWGIDSGIRHSVG 739 (953)
Q Consensus 727 ~vl~dsgv~~~~~ 739 (953)
+++++++++.+|.
T Consensus 170 ~vl~~p~~~~sT~ 182 (283)
T 2ww4_A 170 YLVAHPGVSIPTP 182 (283)
T ss_dssp EEEECCSCCCCHH
T ss_pred EEEEeCCCCCchH
Confidence 9999998876653
No 40
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A*
Probab=99.85 E-value=2.2e-20 Score=205.46 Aligned_cols=258 Identities=16% Similarity=0.162 Sum_probs=185.3
Q ss_pred eEEEEcCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCcc
Q 002206 497 IFVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 571 (953)
Q Consensus 497 ~~~~~APGrv~l----~GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 571 (953)
.+.++||+|||| .|.+.| |+.-..+-++|+++-.+.+++.++. .+.+...
T Consensus 5 ~~~~~apAKiNL~L~v~~~r~DGyh~l~s~~~al~l~D~l~~~~~~~~---------------------~i~~~g~---- 59 (306)
T 3pyf_A 5 SVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVL---------------------SLELVGE---- 59 (306)
T ss_dssp CEEEEEEEEEEEEEEECCCCTTSCCCEEEEEEEEEEEEEEEEEECSSC---------------------EEEEEST----
T ss_pred cEEEEecceEEeecccCCcCCCCCcchheeEEEcccCCEEEEEECCCC---------------------EEEEeCC----
Confidence 467899999999 999998 8888888899999988888876432 1222110
Q ss_pred CCCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHH
Q 002206 572 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSAS 651 (953)
Q Consensus 572 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA 651 (953)
.. .++ + .+..|++..++..+++..|.. .|++|.+.++||.++|||||||
T Consensus 60 ------~~---~~~-------------------p-~~~~Nlv~~A~~~l~~~~g~~--~~~~i~i~~~iP~~~GLGsssa 108 (306)
T 3pyf_A 60 ------GA---DQL-------------------P-TDERNLAWQAAELMAEHVGRA--PDVSIMIDKSIPVAGGMAGGSA 108 (306)
T ss_dssp ------TG---GGS-------------------C-CSTTSHHHHHHHHHHHHTTCC--CCEEEEEEECSCTTSSSCHHHH
T ss_pred ------Cc---cCC-------------------C-CCCccHHHHHHHHHHHHhCCC--CCeEEEEecCCCCCCCcchHHH
Confidence 00 000 0 112578888888777777764 6999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEe
Q 002206 652 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 731 (953)
Q Consensus 652 ~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~d 731 (953)
.++|++.|++.+++.++++++++++|..+| .|..++++||. .+..... +...+++.++++++++++
T Consensus 109 ~a~a~l~al~~~~~~~l~~~~l~~la~~~~----------~Dv~~~~~Gg~---~~~~g~g-e~~~~l~~~~~~~~vl~~ 174 (306)
T 3pyf_A 109 DAAAVLVAMNSLWELNVPRRDLRMLAARLG----------SDVPFALHGGT---ALGTGRG-EELATVLSRNTFHWVLAF 174 (306)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHC----------TTHHHHHHBSE---EEECSSS-SCCEEECCSSCEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCCceeecCce---EEEEeeC-CeEEEccCCCCcEEEEEE
Confidence 999999999999999999999999999987 28899999993 4443332 233667777789999999
Q ss_pred CCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhh
Q 002206 732 SGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAK 811 (953)
Q Consensus 732 sgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 811 (953)
+++..+|.. +.+.+ . ..+ .. .
T Consensus 175 P~~~vsT~~---------------a~~~l----------------------------~------~~~-------~~---~ 195 (306)
T 3pyf_A 175 ADSGLLTSA---------------VYNEL----------------------------D------RLR-------EV---G 195 (306)
T ss_dssp CSSCCCHHH---------------HHHHH----------------------------H------HHH-------HH---S
T ss_pred CCCCCcHHH---------------HHHhh----------------------------h------hhc-------cc---c
Confidence 988776631 00000 0 000 00 0
Q ss_pred cCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHHhhhhhhhc
Q 002206 812 NIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSAC 891 (953)
Q Consensus 812 ~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~sl~~~ 891 (953)
.++ + ..++..+..+|.++ |++.||++|...-+.++.
T Consensus 196 ~~~-----------------------------------~----~~~~~~~~~al~~~----d~~~l~~~l~n~le~~~~- 231 (306)
T 3pyf_A 196 DPP-----------------------------------R----LGEPGPVLAALAAG----DPDQLAPLLGNEMQAAAV- 231 (306)
T ss_dssp CCC-----------------------------------C----CCCHHHHHHHHHHT----CHHHHGGGCEETTHHHHH-
T ss_pred ccc-----------------------------------c----ccCHHHHHHHHHhC----CHHHHHHHhccchHHHHH-
Confidence 000 0 01355677888875 899999988422222221
Q ss_pred CCCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 892 GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 892 ~vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
..+|+++++++.+++ .|++|++|||+| +|+++|.++
T Consensus 232 -~~~P~l~~i~~~~~~-----------~Ga~ga~mSGsG--ptvfal~~~ 267 (306)
T 3pyf_A 232 -SLDPALARALRAGVE-----------AGALAGIVSGSG--PTCAFLCTS 267 (306)
T ss_dssp -HHCTHHHHHHHHHHH-----------TTCSEEEECTTS--SEEEEEESS
T ss_pred -HhChHHHHHHHHHHh-----------cCCCEEEEcCcc--hhheEEeCC
Confidence 248999999999988 689999999988 898888765
No 41
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A
Probab=99.84 E-value=2e-20 Score=207.92 Aligned_cols=275 Identities=13% Similarity=0.080 Sum_probs=178.0
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCc
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (953)
..++||+||.|+|+|.+|+++.+||+.....+.+. .++.+-+ ++ .+. ++.. ..
T Consensus 10 ~~~~ap~nialiky~gk~~~~~~lP~~dslglal~-~~~~~~~---------------------v~-~~~--~~~~--~~ 62 (332)
T 3qt5_A 10 GKARAHTNIALIKYWGKADETYIIPMNNSLSVTLD-RFYTETK---------------------VT-FDP--DFTE--DC 62 (332)
T ss_dssp EEEEEEEEEEEECCCCEEETTTTEESSCEEEEEEE-EEEEEEE---------------------EE-EET--TCSS--CE
T ss_pred EEEEecCcEEEEeeeeeccCCccccCCCceEEEec-CCCCeeE---------------------EE-EcC--CCCc--cE
Confidence 57899999999999999999999999988877765 2232211 11 010 0000 11
Q ss_pred eeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 002206 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (953)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~ 657 (953)
+.++ . ...+.+|.|++..++..+.+..+.+ .|++|.+.++||.++|||||||..+|++
T Consensus 63 ~~i~--g------------------~~~~~~~~n~v~~~~~~~~~~~~~~--~~~~i~~~~~iP~~~GLgSSaa~~~a~~ 120 (332)
T 3qt5_A 63 LILN--G------------------NEVNAKEKEKIQNYMNIVRDLAGNR--LHARIESENYVPTAAGLASSASAYAALA 120 (332)
T ss_dssp EEET--T------------------EECCHHHHHHHHHHHHHHHHHHTCC--CEEEEEEEEESCGGGTCCCHHHHHHHHH
T ss_pred EEEC--C------------------ccCCcchHHHHHHHHHHHHHhcCCC--CCEEEEEecCCCCCCCcchHHHHHHHHH
Confidence 2221 1 0011358899999888877777764 6899999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeec-Ccc--ceeeee---cCCCeEEEEEe
Q 002206 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQ-PAE--LLGVVE---IPSHIRFWGID 731 (953)
Q Consensus 658 ~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~-~~~--~~~~~~---~p~~~~~vl~d 731 (953)
.|++.+++.++++++++++|..+| | |...+++||. +..... ... +..+++ .+++++++++-
T Consensus 121 ~a~~~l~~~~l~~~el~~la~~~~--------g--~~~~~~~GG~---~~~~~g~~~~~~~~~~l~~~~~~~~l~~vv~v 187 (332)
T 3qt5_A 121 AACNEALSLNLSDTDLSRLARRGS--------G--SASRSIFGGF---AEWEKGHDDLTSYAHGINSNGWEKDLSMIFVV 187 (332)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHC--------G--GGGGGGSCSE---EEEECCSSTTTCEEEEECCTTGGGGEEEEEEC
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhc--------C--CchhhhcCCe---EEEecCCCCccceeeecccccCCCCcEEEEEE
Confidence 999999999999999999999874 2 5567889994 333321 111 113343 23577777664
Q ss_pred CCCccccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhh
Q 002206 732 SGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAK 811 (953)
Q Consensus 732 sgv~~~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 811 (953)
......+..+ | .+..+. +. .
T Consensus 188 p~~~~~~~ss-----~-------~~~~~~------------------------------------~~------------~ 207 (332)
T 3qt5_A 188 INNQSKKVSS-----R-------SGMSLT------------------------------------RD------------T 207 (332)
T ss_dssp CCCCCCC--C-----H-------HHHHHH------------------------------------HH------------H
T ss_pred EcCCCCCCch-----H-------HHHHHh------------------------------------hh------------c
Confidence 3322222110 0 000000 00 0
Q ss_pred cCCccchhhhhhhhcCCCCCCceecCCCcccccccccccccchh-hhHHHHHHHHHccCChHHHHHHHHHHHHhhhh---
Q 002206 812 NIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYEN-FRVKAFKALLTAAASDDQLTSLGELLYQCHYS--- 887 (953)
Q Consensus 812 ~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~-~Rv~~~~~~l~~~~~~~~~~~lG~lm~~sh~s--- 887 (953)
.. ... +.+... .|+..++++|.++ |++.||++|.++|..
T Consensus 208 s~-----------------------------~~~----~~v~~~~~~~~~l~~Al~~~----D~~~l~~~~~~d~~~lh~ 250 (332)
T 3qt5_A 208 SR-----------------------------FYQ----YWLDHVDEDLNEAKEAVKNQ----DFQRLGEVIEANGLRMHA 250 (332)
T ss_dssp CT-----------------------------THH----HHHHHHHHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHH
T ss_pred Ch-----------------------------hHH----HHHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHH
Confidence 00 000 011112 2677899999986 999999999855444
Q ss_pred -hhh-c-C--CCCchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEeccC
Q 002206 888 -YSA-C-G--LGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 941 (953)
Q Consensus 888 -l~~-~-~--vs~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~~ 941 (953)
++. . . .-.|+++++++.++++.. .|++|+.++|+| +||++|.++
T Consensus 251 ~~~~~~p~~~yl~p~~~~i~~~~~~~~~--------~Ga~~a~~SGaG--Ptv~~l~~~ 299 (332)
T 3qt5_A 251 TNLGAQPPFTYLVQESYDAMAIVEQCRK--------ANLPCYFTMDAG--PNVKVLVEK 299 (332)
T ss_dssp HHHTSSSCCCSCCHHHHHHHHHHHHHHH--------TTCCEEEECCSS--SCEEEEEEH
T ss_pred HhcccCCCceeeChHHHHHHHHHHHHHh--------CCCcEEEEeCCC--CcEEEEECH
Confidence 443 1 1 136999999999863311 689999999665 898888654
No 42
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5
Probab=99.84 E-value=9.9e-21 Score=205.72 Aligned_cols=159 Identities=16% Similarity=0.150 Sum_probs=123.5
Q ss_pred EEEEcCcceec----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccC
Q 002206 498 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 572 (953)
Q Consensus 498 ~~~~APGrv~l----~GeH~d-~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 572 (953)
+.+ ||||||| .|+|.| |++..++.++|+++.++.+++ + .+++ ..
T Consensus 2 i~~-aPakinl~l~v~g~r~dgyh~~~sl~~ai~l~~~v~~~~--~-~~~i---------------------~~------ 50 (275)
T 1uek_A 2 ERL-APAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEP--V-SSGL---------------------HF------ 50 (275)
T ss_dssp EEE-EEEEEEEEEEEEEECTTSSEEEEEEEEEEEEEEEEEEEE--E-SSCE---------------------EE------
T ss_pred cee-ecCeEEEeeeecCcCCCCCceeeEEEEEcCCCCEEEEEE--C-cEEE---------------------EE------
Confidence 446 9999999 599999 999999999999999999987 2 2221 10
Q ss_pred CCCCceeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 002206 573 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 652 (953)
Q Consensus 573 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 652 (953)
+- ++ + ..|++..++..+++..|.. .|++|.+.++||.++|||||||.
T Consensus 51 --------~~-~~-------------------~---~~n~v~~a~~~~~~~~g~~--~g~~i~i~~~IP~g~GLGSSsa~ 97 (275)
T 1uek_A 51 --------QG-PY-------------------G---RENLAYRAASLYLEAAGQP--GGVRILLEKRIPEGAGLGGGSSD 97 (275)
T ss_dssp --------ES-TT-------------------G---GGSHHHHHHHHHHHHTTCC--CEEEEEEECCSCSSSSSCHHHHH
T ss_pred --------cC-CC-------------------C---CccHHHHHHHHHHHHhCCC--CCEEEEEecCCCCcCcccHHHHH
Confidence 00 00 0 1477888887777666753 69999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccceeeeecCCCeEEEEEeC
Q 002206 653 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 732 (953)
Q Consensus 653 ~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~~~vl~ds 732 (953)
++|++.|++.+++.++ +++++|..+| .|..++++||. .+..... +..++++ +++++++++++
T Consensus 98 a~a~l~al~~l~~~~l---~l~~la~~~g----------~dv~~~~~Gg~---~~~~g~g-~~~~~l~-~~~~~~vl~~p 159 (275)
T 1uek_A 98 AAQVLLALQALYPAEV---DLFALARTLG----------ADVPFFLLGRG---AEARGVG-ERLKPLA-LPPVPAVVFFP 159 (275)
T ss_dssp HHHHHHHHHHHSCSCC---CHHHHHHHHC----------TTHHHHHHCSE---EEEETTT-TEEEEEC-CCCEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCh---HHHHHHHHhC----------CChHHHhcCCe---EEEEccC-ceeEEcc-CCCcEEEEEeC
Confidence 9999999999999988 8999999875 28899999994 4443333 2235666 56899999999
Q ss_pred CCcccc
Q 002206 733 GIRHSV 738 (953)
Q Consensus 733 gv~~~~ 738 (953)
+++.+|
T Consensus 160 ~~~~sT 165 (275)
T 1uek_A 160 GLRVPT 165 (275)
T ss_dssp CCCCCH
T ss_pred CCCCch
Confidence 877665
No 43
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes}
Probab=99.80 E-value=1.8e-18 Score=189.54 Aligned_cols=251 Identities=14% Similarity=0.174 Sum_probs=164.3
Q ss_pred EEEEcCcceeccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhcccCCCCCCCCeEEEEecCCccCCCCCc
Q 002206 498 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 577 (953)
Q Consensus 498 ~~~~APGrv~l~GeH~d~~g~~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 577 (953)
+.+++|++.--+|- |..+|-+||+++.++.+++..+ . +.+....
T Consensus 3 ~~v~vPat~anlG~-----Gfd~lg~al~l~d~v~~~~~~~-~---------------------~~i~~~~--------- 46 (298)
T 3hul_A 3 LRIRVPATTANLGP-----GFDSCGLALTLYLTLDIGAEAD-S---------------------WYIEHNI--------- 46 (298)
T ss_dssp EEEEEEEEEESCTT-----CTTTEEEEEEEEEEEEEEEECS-S---------------------CEEECCC---------
T ss_pred EEEEEeeceeccCC-----CcchhhhhcccceEEEEEEcCC-c---------------------eEEEecC---------
Confidence 67899999877776 7888889999998888875322 1 2221100
Q ss_pred eeccCCccccCCCCcchHhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 002206 578 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 657 (953)
Q Consensus 578 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~y~~~~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~ 657 (953)
. ..++ .+. .|.+..++..++ . .. .|++|.+.++||.++|||||||.++|++
T Consensus 47 -~---~~~p----------------~~~----~nlv~~a~~~~~---~-~~-~g~~i~i~~~iP~~~GLGsssa~~~a~~ 97 (298)
T 3hul_A 47 -G---GGIP----------------HDE----TNVIIETALNLA---P-NL-TPHHLVMTCDIPPARGLGSSSAAVVAGI 97 (298)
T ss_dssp -C---TTCC----------------SST----TSHHHHHHHHHC---T-TC-CCEEEEEEECSCTTSSSSHHHHHHHHHH
T ss_pred -c---ccCC----------------CCC----CcHHHHHHHHHh---c-cC-CceEEEEecCCCCCCCccHHHHHHHHHH
Confidence 0 0010 011 234444444332 2 22 7999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCcceEEEEeecCccc-eeeeecCCCeEEEEEeCCCcc
Q 002206 658 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAEL-LGVVEIPSHIRFWGIDSGIRH 736 (953)
Q Consensus 658 ~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~~~~~~~~~~~~~~-~~~~~~p~~~~~vl~dsgv~~ 736 (953)
.|++.+++.++++++++++|..+|. .| .|...+++||. .+........ ..++++| +++++++++++..
T Consensus 98 ~al~~~~~~~l~~~el~~la~~~eg----~~---ddv~~~~~GG~---~~~~g~ge~~~~~~~~~p-~~~~vlv~p~~~~ 166 (298)
T 3hul_A 98 ELANTLAELNLSKEEKVRIAAEIEG----HP---DNVAPAVLGNW---VVGAKLDGEDFYVRHLFP-DCALIAFIPKAEL 166 (298)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHS----CS---TTHHHHHHCSE---EEEEEETTEEEEEEECCC--CEEEEEECCCCC
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhcC----Cc---ccCcccccCCE---EEEEeCCCcEEEEEcCCC-CeEEEEEECCCCC
Confidence 9999999999999999999999993 22 24556889994 3322222111 1245554 5899999888776
Q ss_pred ccCCCCCccchhhhhhhhhHHHhhhhccCcccCCCCCCCCCCCccchhhhHHHHhhhhhHHhcCChhHHHHHHhhcCCcc
Q 002206 737 SVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPES 816 (953)
Q Consensus 737 ~~~~~~y~~~r~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~lp~~ 816 (953)
+|... |+ .+|+.
T Consensus 167 sT~~a-~~-------------------------------------------------------------------~l~~~ 178 (298)
T 3hul_A 167 LTSES-RG-------------------------------------------------------------------VLPDT 178 (298)
T ss_dssp C----------------------------------------------------------------------------CCE
T ss_pred CcHHH-HH-------------------------------------------------------------------HHhhh
Confidence 65320 10 01100
Q ss_pred chhhhhhhhcCCCCCCceecCCCcccccccccccccchhhhHHHHHHHHHccCChHHHHHHHHHHHH--hhhhhhhcCCC
Q 002206 817 IVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQ--CHYSYSACGLG 894 (953)
Q Consensus 817 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~~~E~~Rv~~~~~~l~~~~~~~~~~~lG~lm~~--sh~sl~~~~vs 894 (953)
+. ....+.+..|+..+..+|.++ |++.||++|+. .|+.++.- .
T Consensus 179 ~~-----------------------------~~~~~~~~~~~~~~~~al~~~----d~~~l~~~l~nd~~~e~~~~~--~ 223 (298)
T 3hul_A 179 LP-----------------------------FKEAVQASSIANVMIAAILRN----DMTLAGEMMERDLWHEKYRSQ--L 223 (298)
T ss_dssp EE-----------------------------HHHHHHHHHHHHHHHHHHTTT----CHHHHHHHHTCCCC-----CT--T
T ss_pred cc-----------------------------HHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHhhhHHHHHHHHh--h
Confidence 00 000122234566788888885 89999999973 47887763 4
Q ss_pred CchHHHHHHHHHHhhhcccccCCCCCcccccccccccCceEEEecc
Q 002206 895 SDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGR 940 (953)
Q Consensus 895 ~~~ld~lv~~a~~~~~~~~~~~~~~g~lGakltGaG~GG~v~~l~~ 940 (953)
+|+++++++.+++ .|++|++|||+| +|+++|.+
T Consensus 224 ~p~l~~l~~~~~~-----------~Ga~ga~~SGsG--ptv~al~~ 256 (298)
T 3hul_A 224 VPHLAQIRDVAKN-----------QGAYAACLSGAG--PTVLVFAP 256 (298)
T ss_dssp GGGHHHHHHHHHT-----------TTCCEEEECTTS--SCEEEEEC
T ss_pred CchHHHHHHHHHH-----------CCCEEEEEeccc--hheEEEEC
Confidence 8999999999987 689999999998 67777755
No 44
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.80 E-value=3.7e-18 Score=192.36 Aligned_cols=319 Identities=16% Similarity=0.025 Sum_probs=196.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (953)
|+|+++..+.| ||..++..++++|.++||+|++++...... ...+...++.+...... ++. .......+...
T Consensus 7 mkIl~~~~~~g-G~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~~~~g~~~~~~~~~-~~~-----~~~~~~~~~~~ 78 (364)
T 1f0k_A 7 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTADRME-ADLVPKHGIEIDFIRIS-GLR-----GKGIKALIAAP 78 (364)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECTTSTH-HHHGGGGTCEEEECCCC-CCT-----TCCHHHHHTCH
T ss_pred cEEEEEeCCCc-cchhHHHHHHHHHHHcCCEEEEEecCCcch-hhhccccCCceEEecCC-ccC-----cCccHHHHHHH
Confidence 67877765555 999999999999999999999998754211 11111112222221000 000 00000000000
Q ss_pred HHHhhccHHHHHHHHHHHHHcCCCcEEEECCC---chHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHH
Q 002206 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (953)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~---~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (953)
..+ ........+.+++.+||+|+++.. ..+..++...++|+|....-.+..... .
T Consensus 79 ~~~-----~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~---------------~-- 136 (364)
T 1f0k_A 79 LRI-----FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTN---------------K-- 136 (364)
T ss_dssp HHH-----HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHH---------------H--
T ss_pred HHH-----HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCCcHHH---------------H--
Confidence 001 112334456778889999999863 234566778899998664322211110 1
Q ss_pred hhccccceEEecCCCCCCCCCCceeecCcccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--HhHH-Hh---hC
Q 002206 173 EDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-EE---YL 244 (953)
Q Consensus 173 ~~~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~--~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll-~~---ll 244 (953)
..+..++.++... ... ++++..+|.-++ ..... ..++.+++++++++|+++.|+.... ..++ +. +.
T Consensus 137 ~~~~~~d~v~~~~-~~~---~~~~~~i~n~v~~~~~~~~--~~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~ 210 (364)
T 1f0k_A 137 WLAKIATKVMQAF-PGA---FPNAEVVGNPVRTDVLALP--LPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG 210 (364)
T ss_dssp HHTTTCSEEEESS-TTS---SSSCEECCCCCCHHHHTSC--CHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHG
T ss_pred HHHHhCCEEEecC-hhh---cCCceEeCCccchhhcccc--hhhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhc
Confidence 1122344444321 111 223333333111 11111 1234566665667788888887653 2322 32 32
Q ss_pred CCCcE-EEEeCCCCCC--------CC-CCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC-Cch
Q 002206 245 PSGWK-CLVCGASDSQ--------LP-PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF-NEE 313 (953)
Q Consensus 245 ~~~~~-~vv~G~~~~~--------lp-~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~-~DQ 313 (953)
. ++. ++++|..... ++ +||++.++++.++++|+.||+||+++|.+++.||+++|+|+|+.|.++. .+|
T Consensus 211 ~-~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q 289 (364)
T 1f0k_A 211 D-SVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQ 289 (364)
T ss_dssp G-GEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHH
T ss_pred C-CcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCchhH
Confidence 2 565 4567765421 22 5899999988889999999999999998999999999999999997644 589
Q ss_pred HHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------CCCCHHHHHHHHHHHHHcc
Q 002206 314 PFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETAIG 373 (953)
Q Consensus 314 ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~---------~~~~g~~~~A~~i~~~l~~ 373 (953)
..|++.+.+.|.|+.++..+++++.+.++|.++ ++..+. ....+...+++.|+++...
T Consensus 290 ~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 290 YWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHH
Confidence 999999999999999998887788999999876 432211 3467888888888887654
No 45
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.75 E-value=8.9e-17 Score=173.80 Aligned_cols=240 Identities=16% Similarity=0.191 Sum_probs=150.5
Q ss_pred cCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhcc
Q 002206 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (953)
Q Consensus 23 ~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (953)
+.-|+||++||++||++|+ +|+|++........+.+ ++.+.. +. ..+
T Consensus 11 ~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~---g~~v~~-------l~----~~d--------------- 57 (282)
T 3hbm_A 11 SQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEI---PYPVYE-------LS----SES--------------- 57 (282)
T ss_dssp TTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGC---CSCEEE-------CS----SSC---------------
T ss_pred CCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHC---CCeEEE-------cC----ccC---------------
Confidence 6678999999999999998 89999875322211111 111111 00 000
Q ss_pred HHHHHHHHHHHHHcCCCcEEEECCCchHHHH----HHHhCCcEEEEecCChhHHHHHHHhhhccchHHHHHHHHhhcccc
Q 002206 103 RKSILKDEVEWLNSIKADLVVSDVVPVACRA----AADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHC 178 (953)
Q Consensus 103 ~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~----A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 178 (953)
..+..+.+++.+||+||.|++.....+ ....++++++++++. ... .+
T Consensus 58 ----~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~-~~~------------------------~~ 108 (282)
T 3hbm_A 58 ----IYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDEI-KPH------------------------HC 108 (282)
T ss_dssp ----HHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSC-CCC------------------------CC
T ss_pred ----HHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCC-Ccc------------------------cC
Confidence 011234556679999999984332222 223589999998875 111 12
Q ss_pred ceEEecCCC-------CCCCCCCceeecCcccccCCCChHHHHHHhC-CCCCCcEEEEEcCCCCch---HhHHHhhCCCC
Q 002206 179 EFLIRLPGY-------CPMPAFRDVIDVPLVVRRLHKSRKEVRKELG-IEDDVKLLILNFGGQPAG---WKLKEEYLPSG 247 (953)
Q Consensus 179 ~~l~~~~~~-------~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~-~~~~~~vVlvs~Gs~~~~---~~ll~~ll~~~ 247 (953)
|.++-..+. ...|.- .....|+. ..+.+++..+.-. ..++.+.|+|++||.+.. ..+++.+....
T Consensus 109 Dllin~~~~~~~~~Y~~~~p~~-~~~l~G~~---Y~~lR~eF~~~~~~~r~~~~~ILv~~GG~d~~~l~~~vl~~L~~~~ 184 (282)
T 3hbm_A 109 DILLNVNAYAKASDYEGLVPFK-CEVRCGFS---YALIREEFYQEAKENRKKKYDFFICMGGTDIKNLSLQIASELPKTK 184 (282)
T ss_dssp SEEEECSTTCCGGGGTTTCC-C-CEEEESGG---GCCCCHHHHHHTTCCCCCCEEEEEECCSCCTTCHHHHHHHHSCTTS
T ss_pred CEEEeCCcccchhhccccCCCC-CeEeeCCc---ccccCHHHHHhhhhccccCCeEEEEECCCchhhHHHHHHHHhhcCC
Confidence 222221110 001110 11233442 1233444433211 112456899999987653 23445554433
Q ss_pred cEEEEeCCCCCC---------CCCCeEECCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHH
Q 002206 248 WKCLVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRN 318 (953)
Q Consensus 248 ~~~vv~G~~~~~---------lp~NV~v~~~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~ 318 (953)
...+++|+..+. ..+|+.+.+|+++|+++|+.||++||+|| +|++|++++|+|+|++|. ..+|..||+
T Consensus 185 ~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~--~~~Q~~nA~ 261 (282)
T 3hbm_A 185 IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICY--VKNQESTAT 261 (282)
T ss_dssp CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESS-HHHHHHHHTTCCEEEECC--SGGGHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCc-HHHHHHHHcCCCEEEEeC--CCCHHHHHH
Confidence 456778887643 13589999999999999999999999988 899999999999999994 568999999
Q ss_pred HHHHcCcEEEEec
Q 002206 319 MLEFYQGGVEMIR 331 (953)
Q Consensus 319 ~l~~~G~g~~l~~ 331 (953)
.+++.|+++.+..
T Consensus 262 ~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 262 WLAKKGYEVEYKY 274 (282)
T ss_dssp HHHHTTCEEECGG
T ss_pred HHHHCCCEEEcch
Confidence 9999999998864
No 46
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.2e-16 Score=160.19 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=112.6
Q ss_pred CCChHHHHHHhCCCCCCcEEEEEcCCCCc--hH----hHHHhhCCCCcEEEE-eCCCC-CCCCCCeEECCCCCCHHHHH-
Q 002206 207 HKSRKEVRKELGIEDDVKLLILNFGGQPA--GW----KLKEEYLPSGWKCLV-CGASD-SQLPPNFIKLPKDAYTPDFM- 277 (953)
Q Consensus 207 ~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~--~~----~ll~~ll~~~~~~vv-~G~~~-~~lp~NV~v~~~~~~~pdlL- 277 (953)
.++|+++.++++..+++++||+++||.+. .. .++.++...++.+++ +|... ..+++||++.+|.+. .++|
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~-~~~l~ 83 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQ-NDLLG 83 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCH-HHHHT
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCH-HHHhc
Confidence 34677888888755567899999999863 22 233445444455554 44433 237889999877653 4788
Q ss_pred -hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 278 -AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 278 -a~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
+.||+||+|+|++|++|++++|+|+|++| .+.||..|++++++.|+|+.++..+++++.|.++|.++++++
T Consensus 84 ~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p--~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 84 HPKTRAFITHGGANGIYEAIYHGIPMVGIP--LFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp STTEEEEEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred CCCcCEEEEcCCccHHHHHHHcCCCEEecc--chhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH
Confidence 78999999999999999999999999999 468999999999999999999988888999999999999765
No 47
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2
Probab=99.69 E-value=8.3e-16 Score=175.92 Aligned_cols=83 Identities=19% Similarity=0.144 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHhCC------C----CCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 002206 610 AAYVAGTILVLMTELGV------R----FEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQK 679 (953)
Q Consensus 610 ~~y~~~~~~~~l~~~g~------~----~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~ 679 (953)
.+++..++..+.+..+. . ...|++|.+.++||.++|||||||.++|++.|++.++|.++++++|+++|..
T Consensus 92 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~I~i~~~IP~~aGLGSSAA~aaA~l~Aln~l~gl~Ls~~eLa~lA~~ 171 (416)
T 1fi4_A 92 NERTQNCLRDLRQLRKEMESKDASLPTLSQWKLHIVSENNFPTAAGLASSAAGFAALVSAIAKLYQLPQSTSEISRIARK 171 (416)
T ss_dssp SSSHHHHHHHHHHHHHHHHTTCTTSCCGGGSCEEEEEEECCCTTSCCCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhccccccccccccccCCcEEEEEecCCcCcCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 35666666655444332 0 0268999999999999999999999999999999999999999999999987
Q ss_pred hhccccCCCCCccchhhhhccCc
Q 002206 680 VENHIVGAPCGVMDQMASACGEA 702 (953)
Q Consensus 680 ~E~~~~G~~sG~~D~~~~~~Gg~ 702 (953)
++ | +...|++||.
T Consensus 172 g~--------G--s~~~sl~GG~ 184 (416)
T 1fi4_A 172 GS--------G--SACRSLFGGY 184 (416)
T ss_dssp HH--------G--GGGGGGSSSE
T ss_pred cC--------C--chheEeeCCc
Confidence 64 2 4567899994
No 48
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.47 E-value=1.9e-13 Score=141.91 Aligned_cols=149 Identities=16% Similarity=0.109 Sum_probs=102.9
Q ss_pred hCCCCCCcEEEEEcCCCCchHhHH---------HhhCCCC-c-EEEEeCCCCC---C--------------CC-------
Q 002206 217 LGIEDDVKLLILNFGGQPAGWKLK---------EEYLPSG-W-KCLVCGASDS---Q--------------LP------- 261 (953)
Q Consensus 217 l~~~~~~~vVlvs~Gs~~~~~~ll---------~~ll~~~-~-~~vv~G~~~~---~--------------lp------- 261 (953)
++.++++++|||++||...-..+. ..+...+ + .++.+|.... . +|
T Consensus 22 ~~~~~~~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 101 (224)
T 2jzc_A 22 LEGIIEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCG 101 (224)
T ss_dssp --CCCCSCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTT
T ss_pred cCCCCCCCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhcccccccccccccccc
Confidence 344557889999999985312221 3343333 4 4556786542 1 12
Q ss_pred ------------CCeEECCCCCCHHHHHh-hcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCchHHHHHHHHHcCcE
Q 002206 262 ------------PNFIKLPKDAYTPDFMA-ASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEEPFLRNMLEFYQGG 326 (953)
Q Consensus 262 ------------~NV~v~~~~~~~pdlLa-~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~--~~DQ~~NA~~l~~~G~g 326 (953)
-++.+++|.+.|+++|+ +||++|||||.||++|++++|+|+|++|.+. ..+|..||+++++.|++
T Consensus 102 ~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 102 DTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp CSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred ccccccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 14567899888999999 9999999999999999999999999999752 35799999999999999
Q ss_pred EEEecCCCChhhHHHHHHHHHhCCCCccC-CCCHHHHHHHHHHHH
Q 002206 327 VEMIRRDLLTGHWKPYLERAISLKPCYEG-GINGGEVAAHILQET 370 (953)
Q Consensus 327 ~~l~~~dl~~~~l~~al~~ll~~~~~~~~-~~~g~~~~A~~i~~~ 370 (953)
+.++. +.|.++|.++......+.. .+.+....+.+|.+.
T Consensus 182 ~~~~~-----~~L~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 221 (224)
T 2jzc_A 182 WSCAP-----TETGLIAGLRASQTEKLKPFPVSHNPSFERLLVET 221 (224)
T ss_dssp CEECS-----CTTTHHHHHHHHTTCCCCSCCCSSSCTHHHHHHHH
T ss_pred EEcCH-----HHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHH
Confidence 88743 4556778777432223322 222444666666665
No 49
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila}
Probab=99.41 E-value=5.1e-12 Score=138.28 Aligned_cols=75 Identities=20% Similarity=0.154 Sum_probs=64.0
Q ss_pred HHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH----HHHHHHhCCCC-CHHHHHHHHHHhhccccCCCCC
Q 002206 616 TILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM----SAIAAAHGLNI-HPRDLALLCQKVENHIVGAPCG 690 (953)
Q Consensus 616 ~~~~~l~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~----~al~~~~~~~l-~~~~l~~~a~~~E~~~~G~~sG 690 (953)
.+..++++++.+ .|++|.+.++||.++|||||||..+|++ .|++.++|+++ +++|+.++|..+| |
T Consensus 79 ~i~~~l~~~~~~--~gv~I~~~n~IP~aaGLgSSAA~~aA~~~~~~~aln~l~gl~l~s~~eL~~lA~~gs--------G 148 (323)
T 3lto_A 79 HLVRLKEYFGYV--GGFLIQSSNNFPHSSGLASSASSFAALTKCASIALSELTQKPLPSIDEQAQLSRLGS--------G 148 (323)
T ss_dssp HHHHHHHHHTCC--CCEEEEEEESSCTTTTCCCHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHTTC--------G
T ss_pred HHHHHHHHhCCC--CCEEEEEEeCCCCccCcchhHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhC--------C
Confidence 355567777754 6999999999999999999999999999 99999999999 9999999997553 2
Q ss_pred ccchhhhhccCc
Q 002206 691 VMDQMASACGEA 702 (953)
Q Consensus 691 ~~D~~~~~~Gg~ 702 (953)
+...|++||.
T Consensus 149 --saa~si~GG~ 158 (323)
T 3lto_A 149 --SSCRSFYAPW 158 (323)
T ss_dssp --GGGGGGSCSE
T ss_pred --CcchhhhCCE
Confidence 4467999994
No 50
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei}
Probab=99.31 E-value=6.2e-11 Score=134.12 Aligned_cols=79 Identities=22% Similarity=0.242 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHhCCC-CCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCC
Q 002206 611 AYVAGTILVLMTELGVR-FEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 689 (953)
Q Consensus 611 ~y~~~~~~~~l~~~g~~-~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~s 689 (953)
+.+..++..+.+..+.. ...|++|.+.++||.++|||||||..+|++.|++.++|.+ ++++++|...|
T Consensus 76 ~~v~~~~~~~~~~~~~~~~~~~v~I~~~~~IP~aaGLGSSAA~aaA~l~Aln~l~gl~---~eL~~lA~~g~-------- 144 (380)
T 2hke_A 76 PRVQSMLLHLRSTCPEELKNKKVNIVSENNFPTAAGMASSASGYCAMSAALIRAFKST---TNVSMLARLGS-------- 144 (380)
T ss_dssp HHHHHHHHHHHTSSCHHHHTCEEEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHTCS---SCHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEEeccCCCccCcchHHHHHHHHHHHHHHHcCCH---HHHHHHHhhcC--------
Confidence 55555555443333430 0268999999999999999999999999999999999987 88999997653
Q ss_pred CccchhhhhccCc
Q 002206 690 GVMDQMASACGEA 702 (953)
Q Consensus 690 G~~D~~~~~~Gg~ 702 (953)
| |...|++||.
T Consensus 145 G--sva~s~~GG~ 155 (380)
T 2hke_A 145 G--SACRSAFGGF 155 (380)
T ss_dssp G--GGGGGGSSSE
T ss_pred c--ceeeehhCCe
Confidence 2 5578999994
No 51
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.19 E-value=5.8e-10 Score=128.40 Aligned_cols=131 Identities=17% Similarity=0.129 Sum_probs=90.8
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHh---h---CC-CCcEEEEeCC----CCC-----------CCCCCeEE
Q 002206 212 EVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---Y---LP-SGWKCLVCGA----SDS-----------QLPPNFIK 266 (953)
Q Consensus 212 e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~---l---l~-~~~~~vv~G~----~~~-----------~lp~NV~v 266 (953)
.+++.+++++++ .++++.|+.... . .+++. + .+ .++.++++|. ... .+.+||++
T Consensus 232 ~~r~~~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~ 310 (438)
T 3c48_A 232 RSRRELGIPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRF 310 (438)
T ss_dssp HHHHHTTCCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEE
T ss_pred hhHHhcCCCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEE
Confidence 478888876444 566777877652 2 23332 2 11 2578888886 221 14678999
Q ss_pred CCCC--CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHH
Q 002206 267 LPKD--AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWK 340 (953)
Q Consensus 267 ~~~~--~~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~ 340 (953)
++++ +.++++|+.+|++|... | .+++.||+++|+|+|+.+.+. ..+.++..+.|+.++..+ ++.|.
T Consensus 311 ~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~------~~e~i~~~~~g~~~~~~d--~~~la 382 (438)
T 3c48_A 311 LDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGG------LPIAVAEGETGLLVDGHS--PHAWA 382 (438)
T ss_dssp ECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTT------HHHHSCBTTTEEEESSCC--HHHHH
T ss_pred cCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCC------hhHHhhCCCcEEECCCCC--HHHHH
Confidence 9987 35679999999999753 2 368999999999999987432 344555666888887655 57899
Q ss_pred HHHHHHHhCCC
Q 002206 341 PYLERAISLKP 351 (953)
Q Consensus 341 ~al~~ll~~~~ 351 (953)
++|.++++++.
T Consensus 383 ~~i~~l~~~~~ 393 (438)
T 3c48_A 383 DALATLLDDDE 393 (438)
T ss_dssp HHHHHHHHCHH
T ss_pred HHHHHHHcCHH
Confidence 99999998763
No 52
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.18 E-value=4.4e-09 Score=119.37 Aligned_cols=132 Identities=17% Similarity=0.143 Sum_probs=93.0
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHh---hC-CCCcEEEEeCCCCC-----------CCCCCeEECCCCC
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL-PSGWKCLVCGASDS-----------QLPPNFIKLPKDA 271 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~---ll-~~~~~~vv~G~~~~-----------~lp~NV~v~~~~~ 271 (953)
+.++++.++++++. .++++.|+.... . .++++ +. ..++.++++|.... .+++||.+.++.+
T Consensus 198 ~~~~~~~~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~ 276 (394)
T 2jjm_A 198 MTQLKKEYGISESE-KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQD 276 (394)
T ss_dssp CHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCS
T ss_pred hHHHHHHcCCCCCC-eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchh
Confidence 45677888875444 455667877652 2 23332 21 13578888886542 1357899888888
Q ss_pred CHHHHHhhcCEEEe----cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHH
Q 002206 272 YTPDFMAASDCMLG----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 272 ~~pdlLa~aDlfIt----hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll 347 (953)
.++++|+.+|++|. -+..+++.||+++|+|+|+.+.++..|. ++..+.|+.++..+ ++.|.++|.+++
T Consensus 277 ~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~------v~~~~~g~~~~~~d--~~~la~~i~~l~ 348 (394)
T 2jjm_A 277 NVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEV------IQHGDTGYLCEVGD--TTGVADQAIQLL 348 (394)
T ss_dssp CTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTT------CCBTTTEEEECTTC--HHHHHHHHHHHH
T ss_pred hHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCChHHH------hhcCCceEEeCCCC--HHHHHHHHHHHH
Confidence 88999999999993 4445789999999999999986655554 44456788887665 578999999999
Q ss_pred hCC
Q 002206 348 SLK 350 (953)
Q Consensus 348 ~~~ 350 (953)
+++
T Consensus 349 ~~~ 351 (394)
T 2jjm_A 349 KDE 351 (394)
T ss_dssp HCH
T ss_pred cCH
Confidence 876
No 53
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.17 E-value=1.9e-09 Score=123.74 Aligned_cols=132 Identities=11% Similarity=0.122 Sum_probs=90.9
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCC-ch--H-hHHHh---hCC----CCcEEEEeCCCCCC-----------CCCCeEEC
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQP-AG--W-KLKEE---YLP----SGWKCLVCGASDSQ-----------LPPNFIKL 267 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~-~~--~-~ll~~---ll~----~~~~~vv~G~~~~~-----------lp~NV~v~ 267 (953)
+.++++.++++++ .++++.|+.. .. . .++++ +.. +++.++++|..... ++.++.+.
T Consensus 239 ~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~ 316 (439)
T 3fro_A 239 KKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVIT 316 (439)
T ss_dssp HHHHHHHHTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEEC
T ss_pred HHHHHHHcCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEc
Confidence 4567888898644 6778888887 42 2 23332 322 56788888876521 45445566
Q ss_pred CCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHH
Q 002206 268 PKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKP 341 (953)
Q Consensus 268 ~~~~--~~pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~ 341 (953)
++.+ .++++|+.||++|.-. -.+++.||+++|+|+|+.+.+ ...+.+ ..|.|..++..+ ++.+.+
T Consensus 317 g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~------~~~e~~-~~~~g~~~~~~d--~~~la~ 387 (439)
T 3fro_A 317 EMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG------GLRDII-TNETGILVKAGD--PGELAN 387 (439)
T ss_dssp SCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST------HHHHHC-CTTTCEEECTTC--HHHHHH
T ss_pred CCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC------CcceeE-EcCceEEeCCCC--HHHHHH
Confidence 7554 3568999999999532 236899999999999998632 233333 356898888766 579999
Q ss_pred HHHHHHh-CCCC
Q 002206 342 YLERAIS-LKPC 352 (953)
Q Consensus 342 al~~ll~-~~~~ 352 (953)
+|.++++ ++..
T Consensus 388 ~i~~ll~~~~~~ 399 (439)
T 3fro_A 388 AILKALELSRSD 399 (439)
T ss_dssp HHHHHHHHTTTT
T ss_pred HHHHHHhcCHHH
Confidence 9999998 6643
No 54
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.15 E-value=8.7e-10 Score=124.64 Aligned_cols=295 Identities=13% Similarity=0.057 Sum_probs=160.2
Q ss_pred CceEEEEEEecC---CCcchHHHHHHHHHHHHHCCCcEEEEeCCCCccccccc-CCCceeeeeecccCCcccccccccCh
Q 002206 13 SKHLVFAYYVTG---HGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEI-QSPRLFIRKVLLDCGAVQADALTVDR 88 (953)
Q Consensus 13 m~~l~il~~v~~---~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i-~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (953)
|++|+|+++... ...|+......++++| +||+|++++..........+ ....+.+... ... .....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~ 71 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRW--PRS------VMLPT 71 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEE--SSS------SCCSC
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEc--ccc------ccccc
Confidence 345666666642 2368888889999999 79999999876432210111 0111122111 000 00000
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-C--chHHHHHHHhCCcEEEEecCChhHHHHHHHhhhccchH
Q 002206 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-V--PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHR 165 (953)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~--~~~~~~A~~~giP~I~is~~~~~~~~~~~~~~~~~~~~ 165 (953)
. .......+++++.+||+|+... . .....++...++|.+.+...+....+... . ...
T Consensus 72 ~---------------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-~----~~~ 131 (394)
T 3okp_A 72 P---------------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSML-P----GSR 131 (394)
T ss_dssp H---------------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTTS-H----HHH
T ss_pred h---------------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhhc-c----hhh
Confidence 0 1122335667888999999875 2 23344567889985444333321100000 0 000
Q ss_pred HHHHHHHhhccccceEEecCCC--------CCCCCCCceeecCcccccC----CCChHHHHHHhCCCCCCcEEEEEcCCC
Q 002206 166 SIVWQIAEDYSHCEFLIRLPGY--------CPMPAFRDVIDVPLVVRRL----HKSRKEVRKELGIEDDVKLLILNFGGQ 233 (953)
Q Consensus 166 ~~~~~l~~~~~~~~~l~~~~~~--------~~~p~~~~v~~vg~~~~~~----~~~~~e~~~~l~~~~~~~vVlvs~Gs~ 233 (953)
... ...+..++.++..+.. ...+....+++.|...... ...+.++++.++++++ ..++++.|+.
T Consensus 132 ~~~---~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~ 207 (394)
T 3okp_A 132 QSL---RKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDT-TPVIACNSRL 207 (394)
T ss_dssp HHH---HHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTT-CCEEEEESCS
T ss_pred HHH---HHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcC-ceEEEEEecc
Confidence 000 1111222222221100 0000001122222221111 1123567888888644 3456777876
Q ss_pred Cch--H-hHHHh---hC--CCCcEEEEeCCCCCC---------CCCCeEECCCC--CCHHHHHhhcCEEEe---------
Q 002206 234 PAG--W-KLKEE---YL--PSGWKCLVCGASDSQ---------LPPNFIKLPKD--AYTPDFMAASDCMLG--------- 285 (953)
Q Consensus 234 ~~~--~-~ll~~---ll--~~~~~~vv~G~~~~~---------lp~NV~v~~~~--~~~pdlLa~aDlfIt--------- 285 (953)
... . .+++. +. .+++.++++|..... +.+||++++++ +.++++|+.+|++|.
T Consensus 208 ~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~ 287 (394)
T 3okp_A 208 VPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGL 287 (394)
T ss_dssp CGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGT
T ss_pred ccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccc
Confidence 542 2 23332 21 257788888875421 35799999987 456789999999996
Q ss_pred --cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 286 --KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 286 --hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
-+..+++.||+++|+|+|+.+.+...|. +.. |.|+.++..+ ++.|.++|.++++++
T Consensus 288 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~------i~~-~~g~~~~~~d--~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 288 DVEGLGIVYLEAQACGVPVIAGTSGGAPET------VTP-ATGLVVEGSD--VDKLSELLIELLDDP 345 (394)
T ss_dssp BCCSSCHHHHHHHHTTCCEEECSSTTGGGG------CCT-TTEEECCTTC--HHHHHHHHHHHHTCH
T ss_pred cccccCcHHHHHHHcCCCEEEeCCCChHHH------Hhc-CCceEeCCCC--HHHHHHHHHHHHhCH
Confidence 4545689999999999999886544443 333 4888887665 579999999999766
No 55
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.13 E-value=4.1e-09 Score=118.27 Aligned_cols=132 Identities=19% Similarity=0.230 Sum_probs=96.6
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCch--H-hHHHhh--CC----CCcEEEEeCCCCCC----------CCCCeEECCCC
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEEY--LP----SGWKCLVCGASDSQ----------LPPNFIKLPKD 270 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~-~ll~~l--l~----~~~~~vv~G~~~~~----------lp~NV~v~~~~ 270 (953)
++++++.++++++ +.++++.|+.... . .+++.+ +. +++.++++|..... +++||+++++.
T Consensus 183 ~~~~~~~~~~~~~-~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~ 261 (374)
T 2iw1_A 183 REIYRQKNGIKEQ-QNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR 261 (374)
T ss_dssp HHHHHHHTTCCTT-CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC
T ss_pred HHHHHHHhCCCCC-CeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCc
Confidence 4567888888644 4566777876552 2 233332 21 36688888875421 45799999988
Q ss_pred CCHHHHHhhcCEEEe----cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEe-cCCCChhhHHHHHHH
Q 002206 271 AYTPDFMAASDCMLG----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI-RRDLLTGHWKPYLER 345 (953)
Q Consensus 271 ~~~pdlLa~aDlfIt----hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~-~~dl~~~~l~~al~~ 345 (953)
+.++++|+.+|++|. -+..+++.||+++|+|+|+.+.++.. +.++..+.|+.++ ..+ ++.+.++|.+
T Consensus 262 ~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~------e~i~~~~~g~~~~~~~~--~~~l~~~i~~ 333 (374)
T 2iw1_A 262 NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYA------HYIADANCGTVIAEPFS--QEQLNEVLRK 333 (374)
T ss_dssp SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTT------HHHHHHTCEEEECSSCC--HHHHHHHHHH
T ss_pred ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCch------hhhccCCceEEeCCCCC--HHHHHHHHHH
Confidence 889999999999996 34457899999999999999854443 4577788899887 444 5789999999
Q ss_pred HHhCC
Q 002206 346 AISLK 350 (953)
Q Consensus 346 ll~~~ 350 (953)
+++++
T Consensus 334 l~~~~ 338 (374)
T 2iw1_A 334 ALTQS 338 (374)
T ss_dssp HHHCH
T ss_pred HHcCh
Confidence 99876
No 56
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.11 E-value=1.6e-09 Score=123.88 Aligned_cols=315 Identities=10% Similarity=0.015 Sum_probs=166.2
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCCCc-ccccccCCCceeeeeecccCCcccccccccC
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDF-VFTSEIQSPRLFIRKVLLDCGAVQADALTVD 87 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~~~-~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~ 87 (953)
..|++++|++++ |. .....-+.+|+++|.++ |+++.++.+.... .....+. .+.+.+ ..+.++.. . ...
T Consensus 23 ~~m~~~kI~~v~-Gt-r~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~--~~~i~~-~~~l~v~~-~--~~~ 94 (403)
T 3ot5_A 23 NAMAKIKVMSIF-GT-RPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLE--IFDIKP-DIDLDIMK-K--GQT 94 (403)
T ss_dssp ---CCEEEEEEE-CS-HHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHH--HTTCCC-SEECCCCC----CCC
T ss_pred hccccceEEEEE-ec-ChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHH--hcCCCC-CcccccCC-C--CCC
Confidence 338878886654 32 34566668899999988 5787655444321 1111010 011101 00111110 0 011
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC----CchHHHHHHHhCCcEEEEe----cCChh-----HHHH
Q 002206 88 RLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV----VPVACRAAADAGIRSVCVT----NFSWD-----FIYA 154 (953)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~----~~~~~~~A~~~giP~I~is----~~~~~-----~~~~ 154 (953)
... . + ...+....+.|++++||+|++.. ..++..+|...+||++.+. ++.|. ...+
T Consensus 95 ~~~---~---~-----~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglrs~~~~~~~p~~~~r 163 (403)
T 3ot5_A 95 LAE---I---T-----SRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNR 163 (403)
T ss_dssp HHH---H---H-----HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCSCTTSSTTHHHHH
T ss_pred HHH---H---H-----HHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccccccccCCcHHHHH
Confidence 111 0 1 12334456778889999999743 2335677889999987662 22221 1111
Q ss_pred HHHhhhccc----hHHHHHHHHhhccccceEEecCCCCCCCCCCceeecCc-ccc--c--CC-CChHHHHHHhCCCCCCc
Q 002206 155 EYVMAAGHH----HRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPL-VVR--R--LH-KSRKEVRKELGIEDDVK 224 (953)
Q Consensus 155 ~~~~~~~~~----~~~~~~~l~~~~~~~~~l~~~~~~~~~p~~~~v~~vg~-~~~--~--~~-~~~~e~~~~l~~~~~~~ 224 (953)
.++....+. .+...+.+... ...| .++..+|. ..+ . +. ..+.+.++.+ ++++
T Consensus 164 ~~~~~~a~~~~~~se~~~~~l~~~-------------Gi~~--~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~ 225 (403)
T 3ot5_A 164 QLTGVMADIHFSPTKQAKENLLAE-------------GKDP--ATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNR 225 (403)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHT-------------TCCG--GGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCE
T ss_pred HHHHHhcCEEECCCHHHHHHHHHc-------------CCCc--ccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCC
Confidence 111100000 00111111100 0001 23444553 111 1 11 1112444444 3567
Q ss_pred EEEEEcCCC---Cch-HhHHHh---hC--CCCcEEEEe-CCCCC---------CCCCCeEECCCCC--CHHHHHhhcCEE
Q 002206 225 LLILNFGGQ---PAG-WKLKEE---YL--PSGWKCLVC-GASDS---------QLPPNFIKLPKDA--YTPDFMAASDCM 283 (953)
Q Consensus 225 vVlvs~Gs~---~~~-~~ll~~---ll--~~~~~~vv~-G~~~~---------~lp~NV~v~~~~~--~~pdlLa~aDlf 283 (953)
++++++|.. +.+ ..++++ +. .+++.+++. |++.. ...+||+++++.. .++.+|++||++
T Consensus 226 ~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~v 305 (403)
T 3ot5_A 226 LILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLV 305 (403)
T ss_dssp EEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEE
T ss_pred EEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEE
Confidence 777776632 222 223332 21 245666654 55421 1246899988775 467999999999
Q ss_pred EecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc---------
Q 002206 284 LGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE--------- 354 (953)
Q Consensus 284 IthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~--------- 354 (953)
|+.+| +.+.||+++|+|+|++| ...+++. +.+.|.++.+.. +++.+.+++.++++++..+.
T Consensus 306 v~~SG-g~~~EA~a~g~PvV~~~--~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~~~~~~m~~~~~~~ 375 (403)
T 3ot5_A 306 FTDSG-GVQEEAPGMGVPVLVLR--DTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNKESHDKMAQAANPY 375 (403)
T ss_dssp EECCH-HHHHHGGGTTCCEEECC--SSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCHHHHHHHHHSCCTT
T ss_pred EECCc-cHHHHHHHhCCCEEEec--CCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCHHHHHHHHhhcCcc
Confidence 99987 34479999999999996 3344433 356788887763 46789999999997763221
Q ss_pred CCCCHHHHHHHHHHHHHc
Q 002206 355 GGINGGEVAAHILQETAI 372 (953)
Q Consensus 355 ~~~~g~~~~A~~i~~~l~ 372 (953)
..++.++++++.|.+++.
T Consensus 376 g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 376 GDGFAANRILAAIKSHFE 393 (403)
T ss_dssp CCSCHHHHHHHHHHHHHT
T ss_pred cCCcHHHHHHHHHHHHhC
Confidence 467888888888888763
No 57
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.11 E-value=1e-09 Score=125.20 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=97.2
Q ss_pred HHHHHHhC-CCCCCcEEEEEc---CCCCch-HhHHHh---hC--CCCcEEEE-eCCCCC---------CCCCCeEECCCC
Q 002206 211 KEVRKELG-IEDDVKLLILNF---GGQPAG-WKLKEE---YL--PSGWKCLV-CGASDS---------QLPPNFIKLPKD 270 (953)
Q Consensus 211 ~e~~~~l~-~~~~~~vVlvs~---Gs~~~~-~~ll~~---ll--~~~~~~vv-~G~~~~---------~lp~NV~v~~~~ 270 (953)
+++++.++ +++++++|++++ |+.+.+ ..++++ +. .+++.+++ +|++.. ...+||++.++.
T Consensus 217 ~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~l 296 (396)
T 3dzc_A 217 ATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQ 296 (396)
T ss_dssp HHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCC
T ss_pred HHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCC
Confidence 56777888 455678888887 334343 233332 21 14666665 464321 124689887766
Q ss_pred C--CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHh
Q 002206 271 A--YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (953)
Q Consensus 271 ~--~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~ 348 (953)
. .++.+|++||+||+.+| +.+.||+++|+|+|+++ ..++.+ .+.+.|.++.+.. .++.|.+++.++++
T Consensus 297 g~~~~~~l~~~ad~vv~~SG-g~~~EA~a~G~PvV~~~--~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~ 366 (396)
T 3dzc_A 297 QYLPFVYLMDRAHIILTDSG-GIQEEAPSLGKPVLVMR--ETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLT 366 (396)
T ss_dssp CHHHHHHHHHHCSEEEESCS-GGGTTGGGGTCCEEECC--SSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCEEEECCc-cHHHHHHHcCCCEEEcc--CCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHc
Confidence 4 35699999999999998 66689999999999975 344542 2456788866653 36889999999998
Q ss_pred CCCCcc---------CCCCHHHHHHHHHH
Q 002206 349 LKPCYE---------GGINGGEVAAHILQ 368 (953)
Q Consensus 349 ~~~~~~---------~~~~g~~~~A~~i~ 368 (953)
++..+. ..++.++++++.|.
T Consensus 367 d~~~~~~m~~~~~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 367 DPQAYQAMSQAHNPYGDGKACQRIADILA 395 (396)
T ss_dssp CHHHHHHHHTSCCTTCCSCHHHHHHHHHH
T ss_pred CHHHHHHHhhccCCCcCChHHHHHHHHHh
Confidence 764221 35566666666553
No 58
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A
Probab=99.09 E-value=3.8e-10 Score=125.92 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=52.0
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhccccCCCCCccchhhhhccCc
Q 002206 630 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 702 (953)
Q Consensus 630 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G~~sG~~D~~~~~~Gg~ 702 (953)
.|++|.+.++||.++|||||||..+|++.|++.++++ ++++.++|..++ | +.+.|+|||.
T Consensus 122 ~~~~I~~~~~iP~aaGLgSSaA~~aA~~~a~n~l~~l---~~el~~lA~~~s--------G--s~~~s~~GG~ 181 (414)
T 3f0n_A 122 YKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGV---EGDLSEVARRGS--------G--SACRSLYGGF 181 (414)
T ss_dssp SCEEEEEEECCCGGGCCCHHHHHHHHHHHHHHHHHTC---CSCCHHHHHHHC--------G--GGGGGGSSSE
T ss_pred CcEEEEEEeCCCCCcCcchhHHHHHHHHHHHHHHhCC---hHHHHHHHHHhC--------C--CcchHhhCCE
Confidence 4899999999999999999999999999999999998 467888887653 2 4467999994
No 59
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.08 E-value=1.8e-09 Score=123.52 Aligned_cols=300 Identities=13% Similarity=0.028 Sum_probs=161.9
Q ss_pred CCCceEEEEEEecCCC-cchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChH
Q 002206 11 ASSKHLVFAYYVTGHG-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRL 89 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G-~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (953)
..|++|+|+++++.+. .|+-.....++++|.++||+|++++........... .. +.. ... +. .......
T Consensus 36 ~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~--~~--~~~-~~~-~~---~~~~~~~- 105 (416)
T 2x6q_A 36 EKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVT--KT--FHN-ALQ-GN---ESLKLTE- 105 (416)
T ss_dssp HTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHH--HH--HHH-HHT-TC---CSCCCCH-
T ss_pred hhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhh--cc--cce-eec-cc---ccccccH-
Confidence 3477788888887654 577788889999999999999988765321110000 00 000 000 00 0011111
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHH-HHhCCcEEEEecCChhHHHHHHHhhhccchHHHH
Q 002206 90 ASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAA-ADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIV 168 (953)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A-~~~giP~I~is~~~~~~~~~~~~~~~~~~~~~~~ 168 (953)
.....+. .......+.+++.+||+|++........++ ....+|+|...+..+...... ..
T Consensus 106 ~~~~~~~--------~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-----------~~ 166 (416)
T 2x6q_A 106 EMKELYL--------NVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLSSPNRE-----------FW 166 (416)
T ss_dssp HHHHHHH--------HHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSCEEEECCSCCSSCCHH-----------HH
T ss_pred HHHHHHH--------HHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCCEEEEEccccCCccHH-----------HH
Confidence 0011111 111223445666799999987632211111 112388887644222100000 00
Q ss_pred HHHHhhccccceEE-ecCCCC--CCC-CCCceeecCccccc--C-CC---ChHHHHHHhCCCCCCcEEEEEcCCCCc--h
Q 002206 169 WQIAEDYSHCEFLI-RLPGYC--PMP-AFRDVIDVPLVVRR--L-HK---SRKEVRKELGIEDDVKLLILNFGGQPA--G 236 (953)
Q Consensus 169 ~~l~~~~~~~~~l~-~~~~~~--~~p-~~~~v~~vg~~~~~--~-~~---~~~e~~~~l~~~~~~~vVlvs~Gs~~~--~ 236 (953)
..+...+...+..+ ..+... -.+ ....+++.|..... + .. .+.++++.++++++++ ++++.|.... +
T Consensus 167 ~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~vGrl~~~Kg 245 (416)
T 2x6q_A 167 EFLRRFVEKYDRYIFHLPEYVQPELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKP-IITQVSRFDPWKG 245 (416)
T ss_dssp HHHHHHHTTSSEEEESSGGGSCTTSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSC-EEEEECCCCTTSC
T ss_pred HHHHHHHHhCCEEEEechHHHHhhCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCc-EEEEEeccccccC
Confidence 01111122333333 111100 011 11123333332111 1 11 2246778888865554 4566676654 2
Q ss_pred H-hHHHh---hC--CCCcEEEEeCCCCC----------------CCCCCeEECCCCC-----CHHHHHhhcCEEEecC--
Q 002206 237 W-KLKEE---YL--PSGWKCLVCGASDS----------------QLPPNFIKLPKDA-----YTPDFMAASDCMLGKI-- 287 (953)
Q Consensus 237 ~-~ll~~---ll--~~~~~~vv~G~~~~----------------~lp~NV~v~~~~~-----~~pdlLa~aDlfIthg-- 287 (953)
. .+++. +. .+++.++++|.... .+.+||+++++.+ .++++|+.+|+||...
T Consensus 246 ~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~ 325 (416)
T 2x6q_A 246 IFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIR 325 (416)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSS
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCc
Confidence 2 23332 21 25788888887531 1457999988654 4678999999999754
Q ss_pred --ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 288 --GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 288 --G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
..+++.||+++|+|+|+.+. ..+.+.++..+.|+.++ +++.|.++|.++++++
T Consensus 326 E~~~~~~lEAma~G~PvI~~~~------~g~~e~i~~~~~g~l~~----d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 326 EGFGLTVTEAMWKGKPVIGRAV------GGIKFQIVDGETGFLVR----DANEAVEVVLYLLKHP 380 (416)
T ss_dssp CSSCHHHHHHHHTTCCEEEESC------HHHHHHCCBTTTEEEES----SHHHHHHHHHHHHHCH
T ss_pred CCCccHHHHHHHcCCCEEEccC------CCChhheecCCCeEEEC----CHHHHHHHHHHHHhCH
Confidence 34689999999999999873 34566666667888886 4679999999999876
No 60
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.01 E-value=6.7e-09 Score=117.27 Aligned_cols=150 Identities=13% Similarity=0.057 Sum_probs=99.2
Q ss_pred HHHHHhC-CCCCCcEEEEEcCCCC---ch-HhHHHh---hC--CCCcEEEE-eCCCC---C------CCCCCeEECCCCC
Q 002206 212 EVRKELG-IEDDVKLLILNFGGQP---AG-WKLKEE---YL--PSGWKCLV-CGASD---S------QLPPNFIKLPKDA 271 (953)
Q Consensus 212 e~~~~l~-~~~~~~vVlvs~Gs~~---~~-~~ll~~---ll--~~~~~~vv-~G~~~---~------~lp~NV~v~~~~~ 271 (953)
++++.++ +++++++++++.|... .+ ..++++ +. .+++.+++ .|... . ...+||++.++..
T Consensus 193 ~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~ 272 (384)
T 1vgv_A 193 ELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQE 272 (384)
T ss_dssp HHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCC
T ss_pred HHHHhccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCC
Confidence 4566666 6556678888888654 22 223332 21 24666665 35432 0 0136899855443
Q ss_pred --CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 272 --YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 272 --~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
.++++|+.||+||+.+| +++.||+++|+|+|+.+.. +.. ..+.+.|.|+.++. +++.|.++|.+++++
T Consensus 273 ~~~~~~~~~~ad~~v~~Sg-~~~lEA~a~G~PvI~~~~~--~~~----~e~v~~g~g~lv~~---d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDSG-GIQEEAPSLGKPVLVMRDT--TER----PEAVTAGTVRLVGT---DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHHHHHCSEEEESSS-TGGGTGGGGTCCEEEESSC--CSC----HHHHHHTSEEEECS---SHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCcEEEECCc-chHHHHHHcCCCEEEccCC--CCc----chhhhCCceEEeCC---CHHHHHHHHHHHHhC
Confidence 46799999999999987 4588999999999999842 222 22455679988865 568999999999987
Q ss_pred CCCcc---------CCCCHHHHHHHHHHHHH
Q 002206 350 KPCYE---------GGINGGEVAAHILQETA 371 (953)
Q Consensus 350 ~~~~~---------~~~~g~~~~A~~i~~~l 371 (953)
+..+. ......+++++.+.++.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 343 ENEYQAMSRAHNPYGDGQACSRILEALKNNR 373 (384)
T ss_dssp HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTC
T ss_pred hHHHhhhhhccCCCcCCCHHHHHHHHHHHHH
Confidence 63221 34567777777777754
No 61
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.93 E-value=2e-08 Score=113.99 Aligned_cols=292 Identities=15% Similarity=0.077 Sum_probs=154.4
Q ss_pred eEEEEEEecCC--C-cchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHH
Q 002206 15 HLVFAYYVTGH--G-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLAS 91 (953)
Q Consensus 15 ~l~il~~v~~~--G-~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 91 (953)
+|+|+|+.+.. . .|+-.....++++|.++||+|++++....... + +.+.... + ... ......
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~---~--~~~~~~~-~---~~~-----~~~~~~- 84 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK---L--PDYVVSG-G---KAV-----PIPYNG- 84 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC---C--CTTEEEC-C---CCC------------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc---C--CcccccC-C---cEE-----eccccC-
Confidence 46777776542 2 57778899999999999999999987643210 0 0000000 0 000 000000
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC---CchHHHHHHHhCCcEEEEecCChh--HHHHHHHhhhccchHH
Q 002206 92 LEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWD--FIYAEYVMAAGHHHRS 166 (953)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~---~~~~~~~A~~~giP~I~is~~~~~--~~~~~~~~~~~~~~~~ 166 (953)
....+.. . ........+++++.+||+|++.. ...+..++...++|+|...+-.+. .....+.. .++
T Consensus 85 --~~~~~~~-~-~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~----~~~- 155 (406)
T 2gek_A 85 --SVARLRF-G-PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQG----ILR- 155 (406)
T ss_dssp --------C-C-HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHHHHHHHS----TTH-
T ss_pred --Ccccccc-c-HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhhhHHHHHH----HHH-
Confidence 0000000 0 01123335567778999999875 233455667779999876432211 11110000 000
Q ss_pred HHHHHHhhccccceEEecCCCC------CCCCCCc-eeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCC-Cch--
Q 002206 167 IVWQIAEDYSHCEFLIRLPGYC------PMPAFRD-VIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQ-PAG-- 236 (953)
Q Consensus 167 ~~~~l~~~~~~~~~l~~~~~~~------~~p~~~~-v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~-~~~-- 236 (953)
..+..++.++..+... ..+. .+ +++.|.......+.+ ...+.+.+ ..++++.|+. ...
T Consensus 156 ------~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~vi~~~v~~~~~~~~~----~~~~~~~~-~~~i~~~G~~~~~~Kg 223 (406)
T 2gek_A 156 ------PYHEKIIGRIAVSDLARRWQMEALGS-DAVEIPNGVDVASFADAP----LLDGYPRE-GRTVLFLGRYDEPRKG 223 (406)
T ss_dssp ------HHHTTCSEEEESSHHHHHHHHHHHSS-CEEECCCCBCHHHHHTCC----CCTTCSCS-SCEEEEESCTTSGGGC
T ss_pred ------HHHhhCCEEEECCHHHHHHHHHhcCC-CcEEecCCCChhhcCCCc----hhhhccCC-CeEEEEEeeeCccccC
Confidence 1112222222211000 0000 11 222222111000000 00112112 2467777887 442
Q ss_pred H-hHHH---hhC--CCCcEEEEeCCCCCC--------CCCCeEECCCCCCH--HHHHhhcCEEEecC----C-hhHHHHH
Q 002206 237 W-KLKE---EYL--PSGWKCLVCGASDSQ--------LPPNFIKLPKDAYT--PDFMAASDCMLGKI----G-YGTVSEA 295 (953)
Q Consensus 237 ~-~ll~---~ll--~~~~~~vv~G~~~~~--------lp~NV~v~~~~~~~--pdlLa~aDlfIthg----G-~~Tv~Ea 295 (953)
. .+++ .+. .+++.++++|..... +++||.++++++.. +++|+.+|++|... | .+++.||
T Consensus 224 ~~~li~a~~~l~~~~~~~~l~i~G~~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea 303 (406)
T 2gek_A 224 MAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEA 303 (406)
T ss_dssp HHHHHHHHHHHHTTSTTCEEEEESCSCHHHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEcCCcHHHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHH
Confidence 2 2333 222 247888888875421 25789999988654 69999999999653 2 3589999
Q ss_pred HHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 296 LAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 296 l~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
+++|+|+|+.+. ....+.+.....|+.++..+ .++|.++|.++++++
T Consensus 304 ~a~G~PvI~~~~------~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 304 MAAGTAVVASDL------DAFRRVLADGDAGRLVPVDD--ADGMAAALIGILEDD 350 (406)
T ss_dssp HHHTCEEEECCC------HHHHHHHTTTTSSEECCTTC--HHHHHHHHHHHHHCH
T ss_pred HHcCCCEEEecC------CcHHHHhcCCCceEEeCCCC--HHHHHHHHHHHHcCH
Confidence 999999999763 34566677667888887655 578999999999876
No 62
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.92 E-value=5.7e-08 Score=113.97 Aligned_cols=131 Identities=17% Similarity=0.034 Sum_probs=89.5
Q ss_pred HHHHHHhC-----CCCCCcEEEEEcCCCCch--H-hHHHhh--C----CCCcEEEEeCC--CC--------------C--
Q 002206 211 KEVRKELG-----IEDDVKLLILNFGGQPAG--W-KLKEEY--L----PSGWKCLVCGA--SD--------------S-- 258 (953)
Q Consensus 211 ~e~~~~l~-----~~~~~~vVlvs~Gs~~~~--~-~ll~~l--l----~~~~~~vv~G~--~~--------------~-- 258 (953)
.++++.++ ++++.+ ++++.|..... . .+++++ + +..+.++++|. .. .
T Consensus 245 ~~~r~~~~~~~~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~ 323 (499)
T 2r60_A 245 AKITKYLERDLGSERMELP-AIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGK 323 (499)
T ss_dssp HHHHHHHHHHSCGGGTTSC-EEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCc-EEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHH
Confidence 56777776 544444 57778877653 2 233332 1 12346777776 11 1
Q ss_pred --------CCCCCeEECCCC--CCHHHHHhhc----CEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHH
Q 002206 259 --------QLPPNFIKLPKD--AYTPDFMAAS----DCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (953)
Q Consensus 259 --------~lp~NV~v~~~~--~~~pdlLa~a----DlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l 320 (953)
.+.++|++++++ +.++++|+.+ |+||.-. | ..++.||+++|+|+|+...+ ...+.+
T Consensus 324 l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~------g~~e~v 397 (499)
T 2r60_A 324 IIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG------GPAEIL 397 (499)
T ss_dssp HHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB------HHHHHT
T ss_pred HHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC------CHHHHh
Confidence 146789999987 3567999999 9999533 3 35899999999999998732 344556
Q ss_pred HHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 321 EFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 321 ~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
.....|+.++..+ ++.|.++|.++++++
T Consensus 398 ~~~~~g~l~~~~d--~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 398 DGGKYGVLVDPED--PEDIARGLLKAFESE 425 (499)
T ss_dssp GGGTSSEEECTTC--HHHHHHHHHHHHSCH
T ss_pred cCCceEEEeCCCC--HHHHHHHHHHHHhCH
Confidence 6666788887665 578999999999766
No 63
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.91 E-value=2.6e-08 Score=112.24 Aligned_cols=141 Identities=13% Similarity=-0.021 Sum_probs=92.6
Q ss_pred CCcEEEEEcCCCCc--h-HhHHHh---hC--CCCcEEEE-eCCCCC---C------CCCCeEECCCCC--CHHHHHhhcC
Q 002206 222 DVKLLILNFGGQPA--G-WKLKEE---YL--PSGWKCLV-CGASDS---Q------LPPNFIKLPKDA--YTPDFMAASD 281 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~--~-~~ll~~---ll--~~~~~~vv-~G~~~~---~------lp~NV~v~~~~~--~~pdlLa~aD 281 (953)
++++|+++.|.... + ..++++ +. .+++.+++ +|.... . ..++|+++++.. .++++|+.||
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad 276 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASL 276 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEE
T ss_pred CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCc
Confidence 45677777774422 2 123332 21 24666665 475421 0 135899885543 4579999999
Q ss_pred EEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCCCcc-------
Q 002206 282 CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE------- 354 (953)
Q Consensus 282 lfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~~~~------- 354 (953)
+||+.+| +.+.||+++|+|+|+.+. .++++. +.+.|.|+.+.. +++.|.++|.++++++..+.
T Consensus 277 ~~v~~S~-g~~lEA~a~G~PvI~~~~--~~~~~~----~~~~g~g~lv~~---d~~~la~~i~~ll~d~~~~~~~~~~~~ 346 (376)
T 1v4v_A 277 LLVTDSG-GLQEEGAALGVPVVVLRN--VTERPE----GLKAGILKLAGT---DPEGVYRVVKGLLENPEELSRMRKAKN 346 (376)
T ss_dssp EEEESCH-HHHHHHHHTTCCEEECSS--SCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHTCHHHHHHHHHSCC
T ss_pred EEEECCc-CHHHHHHHcCCCEEeccC--CCcchh----hhcCCceEECCC---CHHHHHHHHHHHHhChHhhhhhcccCC
Confidence 9999885 456799999999999863 233322 346688887752 56899999999998763221
Q ss_pred --CCCCHHHHHHHHHHHHHc
Q 002206 355 --GGINGGEVAAHILQETAI 372 (953)
Q Consensus 355 --~~~~g~~~~A~~i~~~l~ 372 (953)
.....++++++.+.+++.
T Consensus 347 ~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 347 PYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp SSCCSCHHHHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHHHHhc
Confidence 345778888888888754
No 64
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.88 E-value=2e-09 Score=119.67 Aligned_cols=262 Identities=14% Similarity=0.062 Sum_probs=143.7
Q ss_pred CceEEEEEEecC---------------CCcchHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCC
Q 002206 13 SKHLVFAYYVTG---------------HGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCG 77 (953)
Q Consensus 13 m~~l~il~~v~~---------------~G~GH~~r~l~La~~L~~rGHeVt~is~~~~~~~~~~i~~~~~~~~~~~~~~g 77 (953)
|++|+|+++... ...|.-.....++++|.++||+|++++........ ..+.+.+
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~-----~~~~~~~------ 69 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR-----PGLTVVP------ 69 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----TTEEECS------
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----Ccceecc------
Confidence 666788887765 23577788889999999999999999875422111 1111110
Q ss_pred cccccccccChHHHHHHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECCCchHHHHHHHhCCcEEEEecCChhHHHHHHH
Q 002206 78 AVQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYV 157 (953)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~~~~~~~~A~~~giP~I~is~~~~~~~~~~~~ 157 (953)
... . . ...+.+++.+||+|++........++...++| |...+-.+... .+
T Consensus 70 --------~~~---~-----------~----~l~~~l~~~~~Dvi~~~~~~~~~~~~~~~~~p-v~~~h~~~~~~--~~- 119 (342)
T 2iuy_A 70 --------AGE---P-----------E----EIERWLRTADVDVVHDHSGGVIGPAGLPPGTA-FISSHHFTTRP--VN- 119 (342)
T ss_dssp --------CCS---H-----------H----HHHHHHHHCCCSEEEECSSSSSCSTTCCTTCE-EEEEECSSSBC--SC-
T ss_pred --------CCc---H-----------H----HHHHHHHhcCCCEEEECCchhhHHHHhhcCCC-EEEecCCCCCc--cc-
Confidence 000 0 0 12345677899999998633333335667899 65532111100 00
Q ss_pred hhhccchHHHHHHHHhhccccceEEecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch-
Q 002206 158 MAAGHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG- 236 (953)
Q Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~- 236 (953)
.+..-...+.....+.. +....+++.|.......+.+. .. ++++ ++++.|+....
T Consensus 120 ---~d~ii~~S~~~~~~~~~-------------~~~~~vi~ngvd~~~~~~~~~------~~-~~~~-~i~~vG~~~~~K 175 (342)
T 2iuy_A 120 ---PVGCTYSSRAQRAHCGG-------------GDDAPVIPIPVDPARYRSAAD------QV-AKED-FLLFMGRVSPHK 175 (342)
T ss_dssp ---CTTEEESCHHHHHHTTC-------------CTTSCBCCCCBCGGGSCCSTT------CC-CCCS-CEEEESCCCGGG
T ss_pred ---ceEEEEcCHHHHHHHhc-------------CCceEEEcCCCChhhcCcccc------cC-CCCC-EEEEEecccccc
Confidence 00000000011111111 011122233332111111111 11 1333 45667776652
Q ss_pred -H-hHHHhhCCCCcEEEEeCCCCCC---------CCCCeEECCCCCCH--HHHHhhcCEEEec-------------CC-h
Q 002206 237 -W-KLKEEYLPSGWKCLVCGASDSQ---------LPPNFIKLPKDAYT--PDFMAASDCMLGK-------------IG-Y 289 (953)
Q Consensus 237 -~-~ll~~ll~~~~~~vv~G~~~~~---------lp~NV~v~~~~~~~--pdlLa~aDlfIth-------------gG-~ 289 (953)
. .+++.+...++.++++|..... +++||+++++++.. +++|+.+|++|.. -| .
T Consensus 176 g~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~ 255 (342)
T 2iuy_A 176 GALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGA 255 (342)
T ss_dssp THHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCC
T ss_pred CHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCcc
Confidence 2 2333322126778888875421 35899999998754 7999999999942 22 3
Q ss_pred hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHH--cCcEEEEecCCCChhhHHHHHHHHHh
Q 002206 290 GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF--YQGGVEMIRRDLLTGHWKPYLERAIS 348 (953)
Q Consensus 290 ~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~--~G~g~~l~~~dl~~~~l~~al~~ll~ 348 (953)
+++.||+++|+|+|+.+.+ .+.+.++. ...|+.++. +.+.+.++|.++++
T Consensus 256 ~~~~EAma~G~PvI~s~~~------~~~e~~~~~~~~~g~~~~~---d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 256 TVVSEAAVSGTPVVGTGNG------CLAEIVPSVGEVVGYGTDF---APDEARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHHTTCCEEECCTT------THHHHGGGGEEECCSSSCC---CHHHHHHHHHTSCC
T ss_pred HHHHHHHhcCCCEEEcCCC------ChHHHhcccCCCceEEcCC---CHHHHHHHHHHHHH
Confidence 5899999999999998743 24555666 556766665 45788888877763
No 65
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.81 E-value=6.3e-07 Score=100.47 Aligned_cols=146 Identities=13% Similarity=0.031 Sum_probs=92.5
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCc---hH-hHHHh---hC--CCCcEEEEe-CCCC--CC-----C--CCCeEECCCCC-
Q 002206 212 EVRKELGIEDDVKLLILNFGGQPA---GW-KLKEE---YL--PSGWKCLVC-GASD--SQ-----L--PPNFIKLPKDA- 271 (953)
Q Consensus 212 e~~~~l~~~~~~~vVlvs~Gs~~~---~~-~ll~~---ll--~~~~~~vv~-G~~~--~~-----l--p~NV~v~~~~~- 271 (953)
++++.+ +++++++++.|.... +. .++++ +. .+++.+++. |+.. .. + .+||++.++..
T Consensus 197 ~~~~~~---~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~ 273 (375)
T 3beo_A 197 PVLEKL---GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDV 273 (375)
T ss_dssp HHHHTT---TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCH
T ss_pred HHHHhc---cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCH
Confidence 455544 245677888886542 22 23332 21 245665553 3221 00 1 26899866554
Q ss_pred -CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 272 -YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 272 -~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
.++++|+.||+||+.+| +++.||+++|+|+|+.+. .+.. ..+.+.|.|+.++. +++.|.++|.++++++
T Consensus 274 ~~~~~~~~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~--~~~~----~e~v~~g~g~~v~~---d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDSG-GVQEEAPSLGVPVLVLRD--TTER----PEGIEAGTLKLAGT---DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHTCSEEEECCH-HHHHHHHHHTCCEEECSS--CCSC----HHHHHTTSEEECCS---CHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHhCcEEEECCC-ChHHHHHhcCCCEEEecC--CCCC----ceeecCCceEEcCC---CHHHHHHHHHHHHhCh
Confidence 45689999999999885 569999999999999852 2222 22456778888763 4689999999999876
Q ss_pred CCcc---------CCCCHHHHHHHHHHHH
Q 002206 351 PCYE---------GGINGGEVAAHILQET 370 (953)
Q Consensus 351 ~~~~---------~~~~g~~~~A~~i~~~ 370 (953)
..+. .......++++.+.++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 344 EAHDKMSKASNPYGDGRASERIVEAILKH 372 (375)
T ss_dssp HHHHHHCCCCCTTCCSCHHHHHHHHHHHH
T ss_pred HhHhhhhhcCCCCCCCcHHHHHHHHHHHH
Confidence 3211 2355666777776665
No 66
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.74 E-value=2e-07 Score=108.75 Aligned_cols=130 Identities=19% Similarity=0.102 Sum_probs=90.0
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCch--Hh-HHHh---hCCCCcEEEEeCCCCC-----------CCCCCeE-ECCCCC
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDS-----------QLPPNFI-KLPKDA 271 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~~-ll~~---ll~~~~~~vv~G~~~~-----------~lp~NV~-v~~~~~ 271 (953)
+..+++.++++++...++++.|..... .. ++++ +..+++.++++|.... .+++||. +.++..
T Consensus 277 ~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~ 356 (485)
T 1rzu_A 277 KKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNE 356 (485)
T ss_dssp HHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCH
T ss_pred HHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCH
Confidence 357788888875423477788887652 22 3332 2224788888887641 1467887 577754
Q ss_pred CH-HHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc---------CcEEEEecCCCChh
Q 002206 272 YT-PDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY---------QGGVEMIRRDLLTG 337 (953)
Q Consensus 272 ~~-pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~---------G~g~~l~~~dl~~~ 337 (953)
.. +++|+.+|+||.-. ...++.||+++|+|+|+... ..+.+.+... +.|+.++..+ ++
T Consensus 357 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~------gg~~e~v~~~~~~~~~~~~~~G~l~~~~d--~~ 428 (485)
T 1rzu_A 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVART------GGLADTVIDANHAALASKAATGVQFSPVT--LD 428 (485)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS------HHHHHHCCBCCHHHHHTTCCCBEEESSCS--HH
T ss_pred HHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCC------CChhheecccccccccccCCcceEeCCCC--HH
Confidence 43 58999999999533 23689999999999999863 2345555544 6888887655 57
Q ss_pred hHHHHHHHHH
Q 002206 338 HWKPYLERAI 347 (953)
Q Consensus 338 ~l~~al~~ll 347 (953)
.|.++|.+++
T Consensus 429 ~la~~i~~ll 438 (485)
T 1rzu_A 429 GLKQAIRRTV 438 (485)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8999999998
No 67
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.61 E-value=6.9e-07 Score=101.13 Aligned_cols=151 Identities=11% Similarity=0.055 Sum_probs=97.6
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCC---ch---HhHHHhh---CCC-CcEEEEe-CCCC----CCC------CCCeEECC
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQP---AG---WKLKEEY---LPS-GWKCLVC-GASD----SQL------PPNFIKLP 268 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~---~~---~~ll~~l---l~~-~~~~vv~-G~~~----~~l------p~NV~v~~ 268 (953)
++++++.+++++ ++.+++++|... .. ..+++++ ... ++.+++. ++.. ... .+||++.+
T Consensus 191 ~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~ 269 (385)
T 4hwg_A 191 KSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLP 269 (385)
T ss_dssp HCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECC
T ss_pred hhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEc
Confidence 345778888864 678888887532 11 1233332 111 4555543 3211 012 35788866
Q ss_pred CCCC--HHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 269 KDAY--TPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 269 ~~~~--~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
...+ +..+|++||++||.+|. .+.||+++|+|+|.++ ...|-+. ..+.|.++.+.. +++.+.+++.++
T Consensus 270 ~lg~~~~~~l~~~adlvvt~SGg-v~~EA~alG~Pvv~~~--~~ter~e----~v~~G~~~lv~~---d~~~i~~ai~~l 339 (385)
T 4hwg_A 270 AFSFTDYVKLQMNAFCILSDSGT-ITEEASILNLPALNIR--EAHERPE----GMDAGTLIMSGF---KAERVLQAVKTI 339 (385)
T ss_dssp CCCHHHHHHHHHHCSEEEECCTT-HHHHHHHTTCCEEECS--SSCSCTH----HHHHTCCEECCS---SHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECCcc-HHHHHHHcCCCEEEcC--CCccchh----hhhcCceEEcCC---CHHHHHHHHHHH
Confidence 5543 45899999999999984 5799999999999998 3333111 356788877643 467899999999
Q ss_pred HhCCCCcc----------CCCCHHHHHHHHHHHHH
Q 002206 347 ISLKPCYE----------GGINGGEVAAHILQETA 371 (953)
Q Consensus 347 l~~~~~~~----------~~~~g~~~~A~~i~~~l 371 (953)
++++..+. ..++.++++++.|.+++
T Consensus 340 l~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 340 TEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYV 374 (385)
T ss_dssp HTTCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHH
T ss_pred HhChHHHHHhhccCCCCCCCChHHHHHHHHHHHHh
Confidence 98875442 34667777777777763
No 68
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.54 E-value=6.6e-07 Score=104.37 Aligned_cols=130 Identities=16% Similarity=0.121 Sum_probs=87.7
Q ss_pred hHHHHHHhCCCCC-CcEEEEEcCCCCch--H-hHHHh---hCCCCcEEEEeCCCCC-----------CCCCCeE-ECCCC
Q 002206 210 RKEVRKELGIEDD-VKLLILNFGGQPAG--W-KLKEE---YLPSGWKCLVCGASDS-----------QLPPNFI-KLPKD 270 (953)
Q Consensus 210 ~~e~~~~l~~~~~-~~vVlvs~Gs~~~~--~-~ll~~---ll~~~~~~vv~G~~~~-----------~lp~NV~-v~~~~ 270 (953)
+.++++.++++++ ...++++.|..... . .++++ +..+++.+++.|.... .++++|. +.++.
T Consensus 277 ~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~ 356 (485)
T 2qzs_A 277 KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYH 356 (485)
T ss_dssp HHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCC
T ss_pred HHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCC
Confidence 4577888888641 33456677766542 2 23332 2224778888876531 1457886 67775
Q ss_pred CCH-HHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc---------CcEEEEecCCCCh
Q 002206 271 AYT-PDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY---------QGGVEMIRRDLLT 336 (953)
Q Consensus 271 ~~~-pdlLa~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~---------G~g~~l~~~dl~~ 336 (953)
... +++|+.+|+||.-. ..+++.||+++|+|+|+... ..+.+.+... +.|+.++..+ +
T Consensus 357 ~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~------gg~~e~v~~~~~~~~~~~~~~G~l~~~~d--~ 428 (485)
T 2qzs_A 357 EAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT------GGLADTVSDCSLENLADGVASGFVFEDSN--A 428 (485)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS------HHHHHHCCBCCHHHHHTTCCCBEEECSSS--H
T ss_pred HHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCC------CCccceeccCccccccccccceEEECCCC--H
Confidence 433 68999999999543 23689999999999999863 2344445544 6888888665 5
Q ss_pred hhHHHHHHHHH
Q 002206 337 GHWKPYLERAI 347 (953)
Q Consensus 337 ~~l~~al~~ll 347 (953)
+.|.++|.+++
T Consensus 429 ~~la~~i~~ll 439 (485)
T 2qzs_A 429 WSLLRAIRRAF 439 (485)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78999999998
No 69
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.45 E-value=3.7e-06 Score=103.28 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=79.3
Q ss_pred cEEEEEcCCCCch--H-hHHHhh--C---CCCcEEEEeCCCCC----------------------CCCCCeEECCCCCC-
Q 002206 224 KLLILNFGGQPAG--W-KLKEEY--L---PSGWKCLVCGASDS----------------------QLPPNFIKLPKDAY- 272 (953)
Q Consensus 224 ~vVlvs~Gs~~~~--~-~ll~~l--l---~~~~~~vv~G~~~~----------------------~lp~NV~v~~~~~~- 272 (953)
..++++.|..... . .+++++ + .+++.++++|.... .+.++|.++++...
T Consensus 572 ~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~ 651 (816)
T 3s28_A 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDR 651 (816)
T ss_dssp SCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCH
T ss_pred CeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCcccc
Confidence 4467777877653 2 233322 2 13578888876551 14578999887653
Q ss_pred -----HHHHHh-hcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHH
Q 002206 273 -----TPDFMA-ASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPY 342 (953)
Q Consensus 273 -----~pdlLa-~aDlfIthg----G~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~a 342 (953)
++.+++ ++|+||.-. -..++.||+++|+|+|+...++ ..+.+.....|+.++..| ++.|.++
T Consensus 652 v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG------~~EiV~dg~~Gllv~p~D--~e~LA~a 723 (816)
T 3s28_A 652 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG------PAEIIVHGKSGFHIDPYH--GDQAADT 723 (816)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBT------HHHHCCBTTTBEEECTTS--HHHHHHH
T ss_pred CCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCC------hHHHHccCCcEEEeCCCC--HHHHHHH
Confidence 335666 589999642 2368999999999999986433 344455566788888766 4688888
Q ss_pred HHHHH----hCCC
Q 002206 343 LERAI----SLKP 351 (953)
Q Consensus 343 l~~ll----~~~~ 351 (953)
|.+++ .++.
T Consensus 724 I~~lL~~Ll~d~~ 736 (816)
T 3s28_A 724 LADFFTKCKEDPS 736 (816)
T ss_dssp HHHHHHHHHHCTH
T ss_pred HHHHHHHhccCHH
Confidence 86665 6663
No 70
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.43 E-value=2e-06 Score=97.91 Aligned_cols=131 Identities=12% Similarity=0.017 Sum_probs=83.6
Q ss_pred HHHHHhCCCC-CCcEEEEEcCCCCch--H-hHHHh---hC--CCCcEEEEeCCCCCC-----------------CCCC--
Q 002206 212 EVRKELGIED-DVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ-----------------LPPN-- 263 (953)
Q Consensus 212 e~~~~l~~~~-~~~vVlvs~Gs~~~~--~-~ll~~---ll--~~~~~~vv~G~~~~~-----------------lp~N-- 263 (953)
..++.+++++ +...++++.|..... . .++++ +. .+++.+++.|..... +.++
T Consensus 171 ~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~ 250 (413)
T 3oy2_A 171 DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFT 250 (413)
T ss_dssp THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHH
T ss_pred HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccc
Confidence 5666777753 145677888887552 2 23332 21 256777766654311 3443
Q ss_pred -----eEECCCCC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCc-------
Q 002206 264 -----FIKLPKDA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQG------- 325 (953)
Q Consensus 264 -----V~v~~~~~--~~pdlLa~aDlfIth----gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~------- 325 (953)
+.+.++++ .++++|+.||++|.- +...++.||+++|+|+|+.+.+ .+.+.+.....
T Consensus 251 ~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~------g~~e~v~~~~~~~i~~~~ 324 (413)
T 3oy2_A 251 HLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG------GADDYFSGDCVYKIKPSA 324 (413)
T ss_dssp HHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH------HHHHHSCTTTSEEECCCE
T ss_pred cccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC------ChHHHHccCccccccccc
Confidence 66668765 567899999999953 2335899999999999998632 33344433222
Q ss_pred --------EE--EEecCCCChhhHHHHHHHHHhCCC
Q 002206 326 --------GV--EMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 326 --------g~--~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
|+ .+...+ ++.|.++| ++++++.
T Consensus 325 ~~~~~~~~G~~gl~~~~d--~~~la~~i-~l~~~~~ 357 (413)
T 3oy2_A 325 WISVDDRDGIGGIEGIID--VDDLVEAF-TFFKDEK 357 (413)
T ss_dssp EEECTTTCSSCCEEEECC--HHHHHHHH-HHTTSHH
T ss_pred ccccccccCcceeeCCCC--HHHHHHHH-HHhcCHH
Confidence 55 666554 57999999 9998763
No 71
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.40 E-value=2.8e-05 Score=88.61 Aligned_cols=134 Identities=7% Similarity=-0.093 Sum_probs=92.5
Q ss_pred CcEEEEEcCCCCchHhHHHhh--CCCCcEEEEeCCCC-C--CCCCCeEECCCCC--CHHHHHhhcCEEEec---CC-hhH
Q 002206 223 VKLLILNFGGQPAGWKLKEEY--LPSGWKCLVCGASD-S--QLPPNFIKLPKDA--YTPDFMAASDCMLGK---IG-YGT 291 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~~~ll~~l--l~~~~~~vv~G~~~-~--~lp~NV~v~~~~~--~~pdlLa~aDlfIth---gG-~~T 291 (953)
.+.++++.|.......++..+ ..+++.+++.|... . .+.+||+++|+++ .++++|+.+|+||.- -| .++
T Consensus 221 ~~~~i~~vGrl~~~Kg~~~~l~~~~~~~~l~ivG~g~~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~ 300 (406)
T 2hy7_A 221 EGIHAVAVGSMLFDPEFFVVASKAFPQVTFHVIGSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVY 300 (406)
T ss_dssp SSEEEEEECCTTBCHHHHHHHHHHCTTEEEEEESCSSCCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTT
T ss_pred CCcEEEEEeccccccCHHHHHHHhCCCeEEEEEeCchHHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchH
Confidence 336778888887643333332 23678888888653 1 2578999999875 567999999999952 23 357
Q ss_pred HHHHH-------HcCCcEEEEeCCCCCchHHHHHHHHHcCcEEE-EecCCCChhhHHHHHHHHHhCCCCccCCCCHHHHH
Q 002206 292 VSEAL-------AYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAISLKPCYEGGINGGEVA 363 (953)
Q Consensus 292 v~Eal-------~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~-l~~~dl~~~~l~~al~~ll~~~~~~~~~~~g~~~~ 363 (953)
+.||+ ++|+|+|+... +.....|.. +...| ++.|.++|.++++++.........-...
T Consensus 301 ~lEAm~Kl~eYla~G~PVIas~~------------v~~~~~G~l~v~~~d--~~~la~ai~~ll~~~~~~~~~~~sw~~~ 366 (406)
T 2hy7_A 301 LADSSMKLLQYDFFGLPAVCPNA------------VVGPYKSRFGYTPGN--ADSVIAAITQALEAPRVRYRQCLNWSDT 366 (406)
T ss_dssp HHHHCHHHHHHHHHTCCEEEEGG------------GTCSCSSEEEECTTC--HHHHHHHHHHHHHCCCCCCSCCCBHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEehh------------cccCcceEEEeCCCC--HHHHHHHHHHHHhCcchhhhhcCCHHHH
Confidence 89999 99999999863 334455777 77665 5799999999998875222334455555
Q ss_pred HHHHHHH
Q 002206 364 AHILQET 370 (953)
Q Consensus 364 A~~i~~~ 370 (953)
++.+.+.
T Consensus 367 a~~~~~~ 373 (406)
T 2hy7_A 367 TDRVLDP 373 (406)
T ss_dssp HHHHHCG
T ss_pred HHHHHHh
Confidence 5555554
No 72
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.26 E-value=3.1e-06 Score=100.86 Aligned_cols=132 Identities=11% Similarity=0.018 Sum_probs=86.0
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCch--HhHHHh---hC--CCCcEEEEeC-CCCC-----------CCC-CCeEECCCCC-
Q 002206 213 VRKELGIEDDVKLLILNFGGQPAG--WKLKEE---YL--PSGWKCLVCG-ASDS-----------QLP-PNFIKLPKDA- 271 (953)
Q Consensus 213 ~~~~l~~~~~~~vVlvs~Gs~~~~--~~ll~~---ll--~~~~~~vv~G-~~~~-----------~lp-~NV~v~~~~~- 271 (953)
.++.++++++ ++|+ ..|+.... ..+++. +. .+++.++++| .... .+. ++|++.|+++
T Consensus 367 ~r~~~~~~~~-~~v~-~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~ 444 (568)
T 2vsy_A 367 SRTQCGLPEQ-GVVL-CCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPH 444 (568)
T ss_dssp CTGGGTCCTT-SCEE-EECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCH
T ss_pred CccccCCCCC-CEEE-EeCCccccCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCH
Confidence 4567787644 3444 44555432 123332 21 2577888888 4331 144 7899999885
Q ss_pred -CHHHHHhhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHH
Q 002206 272 -YTPDFMAASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 272 -~~pdlLa~aDlfIth---gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll 347 (953)
.++++|+.+|+||.. ++.+++.||+++|+|+|++|...+.- ...+..+...|..-.+.. +++.+.+++.+++
T Consensus 445 ~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s-~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~ 520 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAA-RVAGSLNHHLGLDEMNVA---DDAAFVAKAVALA 520 (568)
T ss_dssp HHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGG-SHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchH-HHHHHHHHHCCChhhhcC---CHHHHHHHHHHHh
Confidence 567999999999942 44568999999999999987332211 123456666676654433 4678999999999
Q ss_pred hCC
Q 002206 348 SLK 350 (953)
Q Consensus 348 ~~~ 350 (953)
+++
T Consensus 521 ~~~ 523 (568)
T 2vsy_A 521 SDP 523 (568)
T ss_dssp HCH
T ss_pred cCH
Confidence 876
No 73
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.22 E-value=2.1e-06 Score=98.24 Aligned_cols=96 Identities=11% Similarity=0.035 Sum_probs=70.2
Q ss_pred CcEEEEeCCCCCC----CCCCeEECCCCC--CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHH
Q 002206 247 GWKCLVCGASDSQ----LPPNFIKLPKDA--YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFL 316 (953)
Q Consensus 247 ~~~~vv~G~~~~~----lp~NV~v~~~~~--~~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~N 316 (953)
++.+++.|..... +..+|+++++++ .++++|+.||+||.-. |+ .++.|||++|+|+|+ ...+..|-
T Consensus 276 ~~~l~ivG~~~~~~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g~~e~--- 351 (413)
T 2x0d_A 276 EWKIISVGEKHKDIALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYENKDL--- 351 (413)
T ss_dssp GCEEEEEESCCCCEEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBTTBCG---
T ss_pred ceEEEEEcCCchhhhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCCcchh---
Confidence 3788888865432 456888888863 5679999999999532 33 478999999999999 43333332
Q ss_pred HHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 317 RNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 317 A~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
++....|+.++..| ++.|.++|.++++++.
T Consensus 352 ---v~~~~~G~lv~~~d--~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 352 ---SNWHSNIVSLEQLN--PENIAETLVELCMSFN 381 (413)
T ss_dssp ---GGTBTTEEEESSCS--HHHHHHHHHHHHHHTC
T ss_pred ---hhcCCCEEEeCCCC--HHHHHHHHHHHHcCHH
Confidence 44455788888766 5789999999998773
No 74
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.07 E-value=0.00027 Score=79.46 Aligned_cols=85 Identities=14% Similarity=0.186 Sum_probs=62.2
Q ss_pred CCeEECCCCCCHHHHHhhcCEEEe-----cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCCh
Q 002206 262 PNFIKLPKDAYTPDFMAASDCMLG-----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (953)
Q Consensus 262 ~NV~v~~~~~~~pdlLa~aDlfIt-----hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~ 336 (953)
.++.+.++...++++|+.+|+|+. -+|..++.||+++|+|+|.-|. ........+.+...|+++.. .| +
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~--~~~~~e~~~~~~~~G~l~~~--~d--~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPY--THKVNDLKEFLEKEGAGFEV--KN--E 333 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSC--CTTSHHHHHHHHHTTCEEEC--CS--H
T ss_pred CcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCC--ccChHHHHHHHHHCCCEEEe--CC--H
Confidence 357777777889999999999654 2344789999999999998663 22223445556667877655 33 5
Q ss_pred hhHHHHHHHHHhCCCCc
Q 002206 337 GHWKPYLERAISLKPCY 353 (953)
Q Consensus 337 ~~l~~al~~ll~~~~~~ 353 (953)
+.|.++|.+++++ ..+
T Consensus 334 ~~La~ai~~ll~d-~~r 349 (374)
T 2xci_A 334 TELVTKLTELLSV-KKE 349 (374)
T ss_dssp HHHHHHHHHHHHS-CCC
T ss_pred HHHHHHHHHHHhH-HHH
Confidence 7899999999987 544
No 75
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=97.91 E-value=5e-05 Score=75.65 Aligned_cols=119 Identities=15% Similarity=0.032 Sum_probs=84.1
Q ss_pred CCcEEEEEcCCCCch--H-hHHHh--hCCCCcEEEEeCCCCC-----------C--CCCCeEECCCCCC--HHHHHhhcC
Q 002206 222 DVKLLILNFGGQPAG--W-KLKEE--YLPSGWKCLVCGASDS-----------Q--LPPNFIKLPKDAY--TPDFMAASD 281 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~-~ll~~--ll~~~~~~vv~G~~~~-----------~--lp~NV~v~~~~~~--~pdlLa~aD 281 (953)
+++ ++++.|+.... . .+++. .+ +++.++++|.... . +++||+++++++. ++++|+.+|
T Consensus 22 ~~~-~i~~~G~~~~~Kg~~~li~a~~~l-~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 22 YGD-FWLSVNRIYPEKRIELQLEVFKKL-QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CCS-CEEEECCSSGGGTHHHHHHHHHHC-TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCC-EEEEEeccccccCHHHHHHHHHhC-CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 444 45677877653 2 23332 23 5677777776442 1 4569999998876 779999999
Q ss_pred EEEe---cCCh-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCCC
Q 002206 282 CMLG---KIGY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (953)
Q Consensus 282 lfIt---hgG~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~~ 351 (953)
++|. .-|+ .++.||+++|+|+|+.+. ..+.+.++..+.|+.+ ..+ .+.|.++|.++++++.
T Consensus 100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~~------~~~~e~i~~~~~g~~~-~~d--~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 100 GLLCTAKDEDFGLTPIEAMASGKPVIAVNE------GGFKETVINEKTGYLV-NAD--VNEIIDAMKKVSKNPD 164 (177)
T ss_dssp EEEECCSSCCSCHHHHHHHHTTCCEEEESS------HHHHHHCCBTTTEEEE-CSC--HHHHHHHHHHHHHCTT
T ss_pred EEEeCCCcCCCChHHHHHHHcCCcEEEeCC------CCHHHHhcCCCccEEe-CCC--HHHHHHHHHHHHhCHH
Confidence 9997 2233 589999999999999862 3455666666788888 444 5799999999998874
No 76
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.79 E-value=0.0014 Score=77.27 Aligned_cols=132 Identities=17% Similarity=0.129 Sum_probs=82.0
Q ss_pred HHHHHHhCCCCC-CcEEEEEcCCCCch--Hh-HHH---hhCCCCcEEEEeCCCCCC-----------CCCCeEECCCCC-
Q 002206 211 KEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDSQ-----------LPPNFIKLPKDA- 271 (953)
Q Consensus 211 ~e~~~~l~~~~~-~~vVlvs~Gs~~~~--~~-ll~---~ll~~~~~~vv~G~~~~~-----------lp~NV~v~~~~~- 271 (953)
..+++.++++.+ +..++++.|..... .. +++ .+...++.+++.|..... ++.++.+.....
T Consensus 313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 392 (536)
T 3vue_A 313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 392 (536)
T ss_dssp HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence 345667777532 22356677877653 22 333 355566778877765421 577888765543
Q ss_pred -CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCC--------CChhh
Q 002206 272 -YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD--------LLTGH 338 (953)
Q Consensus 272 -~~pdlLa~aDlfIthg---G~-~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~d--------l~~~~ 338 (953)
.++.+++.||+||.-. |+ .+++||+++|+|+|+...+ ...+.+....-|..+...+ .+++.
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g------G~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~ 466 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG------GLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKK 466 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT------HHHHHCCBTTTEEECCCCCSCTTCCCHHHHHH
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC------CchheeeCCCCccccccCCCceeEECCCCHHH
Confidence 2347889999999643 22 5899999999999997643 3444455544565433221 12457
Q ss_pred HHHHHHHHHh
Q 002206 339 WKPYLERAIS 348 (953)
Q Consensus 339 l~~al~~ll~ 348 (953)
|.++|++++.
T Consensus 467 la~ai~ral~ 476 (536)
T 3vue_A 467 VAATLKRAIK 476 (536)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888775
No 77
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.73 E-value=0.00022 Score=72.01 Aligned_cols=129 Identities=12% Similarity=0.106 Sum_probs=91.9
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCC-ch--H-hHHH---hhC--C--CCcEEEEeCCCC--C--C-------CCCCeEE-
Q 002206 210 RKEVRKELGIEDDVKLLILNFGGQP-AG--W-KLKE---EYL--P--SGWKCLVCGASD--S--Q-------LPPNFIK- 266 (953)
Q Consensus 210 ~~e~~~~l~~~~~~~vVlvs~Gs~~-~~--~-~ll~---~ll--~--~~~~~vv~G~~~--~--~-------lp~NV~v- 266 (953)
+..+++.++++ +.+ ++++.|+.. .. . .+++ .+. . +++.++++|... . . ++ ||++
T Consensus 24 ~~~~r~~~~~~-~~~-~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~ 100 (200)
T 2bfw_A 24 KKSLLSKFGMD-EGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVI 100 (200)
T ss_dssp HHHHHHHTTCC-SCE-EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEE
T ss_pred HHHHHHHcCCC-CCC-EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEE
Confidence 55788889885 344 667778877 42 2 2332 232 2 457888888755 1 1 34 9999
Q ss_pred CCCCC--CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHH
Q 002206 267 LPKDA--YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWK 340 (953)
Q Consensus 267 ~~~~~--~~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~ 340 (953)
+++++ .++++|+.+|++|... | ..++.||+++|+|+|+.+. ..+...+ ..+.|+.++..+ .+.+.
T Consensus 101 ~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~------~~~~e~~-~~~~g~~~~~~~--~~~l~ 171 (200)
T 2bfw_A 101 TEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV------GGLRDII-TNETGILVKAGD--PGELA 171 (200)
T ss_dssp CSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC------HHHHHHC-CTTTCEEECTTC--HHHHH
T ss_pred eccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC------CChHHHc-CCCceEEecCCC--HHHHH
Confidence 99986 6779999999999643 2 3689999999999999763 2445556 667788887655 57899
Q ss_pred HHHHHHHh-CC
Q 002206 341 PYLERAIS-LK 350 (953)
Q Consensus 341 ~al~~ll~-~~ 350 (953)
++|.++++ ++
T Consensus 172 ~~i~~l~~~~~ 182 (200)
T 2bfw_A 172 NAILKALELSR 182 (200)
T ss_dssp HHHHHHHHCCH
T ss_pred HHHHHHHhcCH
Confidence 99999998 66
No 78
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.83 E-value=0.05 Score=60.21 Aligned_cols=249 Identities=13% Similarity=0.131 Sum_probs=121.5
Q ss_pred eEEEEEEecCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCCCcccccccC-CCcee-eeeecccCCcccccccccChHH
Q 002206 15 HLVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFVFTSEIQ-SPRLF-IRKVLLDCGAVQADALTVDRLA 90 (953)
Q Consensus 15 ~l~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~~~~~~~~i~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 90 (953)
..+|++ +...+.|-+..+.++.++|+++ +.+|++++.... .+.+. .|.+. +.. .+...
T Consensus 8 ~~~iLv-i~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~---~~l~~~~p~vd~vi~--------------~~~~~ 69 (349)
T 3tov_A 8 YKRIVV-TFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKL---QQVMEYNPNIDELIV--------------VDKKG 69 (349)
T ss_dssp TCEEEE-ECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGG---GGGTSSCTTCSEEEE--------------ECCSS
T ss_pred CCEEEE-EecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcch---hHHHhcCCCccEEEE--------------eCccc
Confidence 345544 4567899999999999999998 889999877431 11111 12211 111 01000
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHcCCC-cEEEECC-CchHHHHHHHhCCcE-EEEecCChhHHHHHHHhhh--ccc-h
Q 002206 91 SLEKYSETAVAPRKSILKDEVEWLNSIKA-DLVVSDV-VPVACRAAADAGIRS-VCVTNFSWDFIYAEYVMAA--GHH-H 164 (953)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~L~~~kp-DlVV~D~-~~~~~~~A~~~giP~-I~is~~~~~~~~~~~~~~~--~~~-~ 164 (953)
....+.. .....+.|++.+| |+||.-+ ..-...++...++|. |.+....+...+....+.. ..+ .
T Consensus 70 ~~~~~~~---------~~~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~riG~~~~~~~~~~~~~~~~~~~~~h~v 140 (349)
T 3tov_A 70 RHNSISG---------LNEVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITTGMSHFLFRPFMTKYTRLDRKTRHAA 140 (349)
T ss_dssp HHHHHHH---------HHHHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEEECCCTTTGGGCSEECCCCTTTSCHH
T ss_pred ccccHHH---------HHHHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEEecCCCCccccccccccCCCCCccHH
Confidence 0001111 1122456777899 9999765 444556777889996 4444322222221111100 001 0
Q ss_pred HHHHHHHHhhccccceEEecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCch--H-----
Q 002206 165 RSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--W----- 237 (953)
Q Consensus 165 ~~~~~~l~~~~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs~~~~--~----- 237 (953)
+...+ +.... ..+. ..+..+.+ .++... ....+++...++++++++.|.+..|+.... +
T Consensus 141 ~r~~~-ll~~l-------g~~~--~~~~~~~l-~~~~~~---~~~~~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~ 206 (349)
T 3tov_A 141 DMYIN-VLEQL-------GVTD--TSNSGLHI-EICEEW---RCQAQEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERF 206 (349)
T ss_dssp HHHHH-HHHHT-------TCCC--CCCCCCCC-CCCHHH---HHHHHHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHH
T ss_pred HHHHH-HHHHh-------CCCc--cCCCceee-eCCHHH---HHHHHHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHH
Confidence 11111 11111 0000 00000000 011000 000112223446665678899988875431 1
Q ss_pred -hHHHhhCCCCcEEEEeCCCCCC---------CCCCeEEC-CCCC--CHHHHHhhcCEEEec-CChhHHHHHHHcCCcEE
Q 002206 238 -KLKEEYLPSGWKCLVCGASDSQ---------LPPNFIKL-PKDA--YTPDFMAASDCMLGK-IGYGTVSEALAYKLPFV 303 (953)
Q Consensus 238 -~ll~~ll~~~~~~vv~G~~~~~---------lp~NV~v~-~~~~--~~pdlLa~aDlfIth-gG~~Tv~Eal~~GvP~l 303 (953)
++.+.+...++.++++|...+. ++.++..+ +... .+..+|+.||++|+. .| ++.=|.++|+|+|
T Consensus 207 ~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG--~~HlAaa~g~P~v 284 (349)
T 3tov_A 207 AHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITNDSG--PMHVGISQGVPIV 284 (349)
T ss_dssp HHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEESSH--HHHHHHTTTCCEE
T ss_pred HHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECCCC--HHHHHHhcCCCEE
Confidence 1222333335667777654321 34444433 3322 233788899999997 55 3334899999999
Q ss_pred EEe
Q 002206 304 FVR 306 (953)
Q Consensus 304 ~iP 306 (953)
++=
T Consensus 285 ~lf 287 (349)
T 3tov_A 285 ALY 287 (349)
T ss_dssp EEC
T ss_pred EEE
Confidence 984
No 79
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.66 E-value=0.0027 Score=61.71 Aligned_cols=116 Identities=9% Similarity=-0.065 Sum_probs=73.7
Q ss_pred cEEEEEcCCCCch--H-hHHHhh--CC--CCcEEEEeCCCCCC---------CCCCeEECCCCC--CHHHHHhhcCEEEe
Q 002206 224 KLLILNFGGQPAG--W-KLKEEY--LP--SGWKCLVCGASDSQ---------LPPNFIKLPKDA--YTPDFMAASDCMLG 285 (953)
Q Consensus 224 ~vVlvs~Gs~~~~--~-~ll~~l--l~--~~~~~vv~G~~~~~---------lp~NV~v~~~~~--~~pdlLa~aDlfIt 285 (953)
++++++.|+.... . .+++.+ +. +++.+++.|..... ++.++++ ++.+ .++++|+.+|++|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v~ 80 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYVH 80 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEEE
Confidence 5677888877653 2 233332 22 45678888865421 2347777 7764 35689999999996
Q ss_pred cC----ChhHHHHHHHcCC-cEEEEe-CCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 286 KI----GYGTVSEALAYKL-PFVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 286 hg----G~~Tv~Eal~~Gv-P~l~iP-~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
-. ...++.||+++|+ |+|+.. .+...|. +...+. .+...+ ++.+.++|.++++++
T Consensus 81 ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~------~~~~~~--~~~~~~--~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 81 AANVESEAIACLEAISVGIVPVIANSPLSATRQF------ALDERS--LFEPNN--AKDLSAKIDWWLENK 141 (166)
T ss_dssp CCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGG------CSSGGG--EECTTC--HHHHHHHHHHHHHCH
T ss_pred CCcccCccHHHHHHHhcCCCcEEeeCCCCchhhh------ccCCce--EEcCCC--HHHHHHHHHHHHhCH
Confidence 32 3358999999997 999944 2222222 222233 444444 579999999999866
No 80
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.65 E-value=0.032 Score=61.35 Aligned_cols=254 Identities=10% Similarity=0.045 Sum_probs=122.1
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHC--CCcEEEEeCCCCcccccccC-CCce-eeeeecccCCcccccccccChHHHH
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDFVFTSEIQ-SPRL-FIRKVLLDCGAVQADALTVDRLASL 92 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt~is~~~~~~~~~~i~-~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~ 92 (953)
+|++ +...+.|-+..+.++.++|+++ +.++++++.... .+.+. .|.+ .+.. .+....
T Consensus 2 kILi-i~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~---~~l~~~~p~i~~v~~--------------~~~~~~- 62 (348)
T 1psw_A 2 KILV-IGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWC---RPLLSRMPEVNEAIP--------------MPLGHG- 62 (348)
T ss_dssp EEEE-ECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGG---HHHHTTCTTEEEEEE--------------C------
T ss_pred eEEE-EeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcch---hHHHhcCCccCEEEE--------------ecCCcc-
Confidence 4554 4667889999999999999997 899999987421 11111 1221 1111 000000
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHcCCCcEEEECC-CchHHHHHHHhCCcE-EEEecC-ChhHHHHHHHhhhccchHHHHH
Q 002206 93 EKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRS-VCVTNF-SWDFIYAEYVMAAGHHHRSIVW 169 (953)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~L~~~kpDlVV~D~-~~~~~~~A~~~giP~-I~is~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (953)
. . ... ...+..+.|++.+||+||.-+ ..-...++...++|. +.+... .+. .+...............+
T Consensus 63 ---~-~---~~~-~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~ig~~~~~~~~-~~~~~~~~~~~~~~~~~~ 133 (348)
T 1psw_A 63 ---A-L---EIG-ERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRTGWRGEMRYG-LLNDVRVLDKEAWPLMVE 133 (348)
T ss_dssp ---------CHH-HHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEEEECTTTCTT-TCTEEECCCTTTCCSHHH
T ss_pred ---c-c---chH-HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEeccCCCcccc-cccccccCCCCCCchHHH
Confidence 0 0 000 112335567888999999433 344555677789997 444321 111 010000000000000111
Q ss_pred HHHhhccccceEEecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCC-CCc-h-H------hHH
Q 002206 170 QIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGG-QPA-G-W------KLK 240 (953)
Q Consensus 170 ~l~~~~~~~~~l~~~~~~~~~p~~~~v~~vg~~~~~~~~~~~e~~~~l~~~~~~~vVlvs~Gs-~~~-~-~------~ll 240 (953)
+....... +...... ..++.....|. ...+....+++++.++++.+++.|.+..|+ ... . + ++.
T Consensus 134 ~~~~l~~~----~g~~~~~--~~~~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~ 206 (348)
T 1psw_A 134 RYIALAYD----KGIMRTA--QDLPQPLLWPQ-LQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELA 206 (348)
T ss_dssp HHHHTTSC----GGGCSSG--GGSCSSCCCCC-CCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHH
T ss_pred HHHHHHhh----ccccccc--ccCCcccCCce-eecCHHHHHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHH
Confidence 11111000 0000000 00000000010 000111233566677776567888899888 322 1 2 122
Q ss_pred HhhCCCCcEEEEeCCCCCC---------CC----CCeEE-CCCCC--CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 002206 241 EEYLPSGWKCLVCGASDSQ---------LP----PNFIK-LPKDA--YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (953)
Q Consensus 241 ~~ll~~~~~~vv~G~~~~~---------lp----~NV~v-~~~~~--~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~ 304 (953)
..+...++.++++|..... ++ .++.. .+... .+..+|++||++|+.-. |++.-|.++|+|+|+
T Consensus 207 ~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds-g~~HlAaa~g~P~v~ 285 (348)
T 1psw_A 207 KQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS-GLMHVAAALNRPLVA 285 (348)
T ss_dssp HHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS-HHHHHHHHTTCCEEE
T ss_pred HHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC-HHHHHHHHcCCCEEE
Confidence 2333336777777754321 22 24543 34322 23478889999999733 456669999999999
Q ss_pred Ee
Q 002206 305 VR 306 (953)
Q Consensus 305 iP 306 (953)
+=
T Consensus 286 lf 287 (348)
T 1psw_A 286 LY 287 (348)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 81
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=95.50 E-value=0.036 Score=61.08 Aligned_cols=111 Identities=13% Similarity=-0.032 Sum_probs=75.5
Q ss_pred CcEEEEEcCCCCchHhHHHhhCCCCcEEEEeCCCCCC-CCCCeEECCCCC--CHHHHHhhcCEEEe-cCC----------
Q 002206 223 VKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQ-LPPNFIKLPKDA--YTPDFMAASDCMLG-KIG---------- 288 (953)
Q Consensus 223 ~~vVlvs~Gs~~~~~~ll~~ll~~~~~~vv~G~~~~~-lp~NV~v~~~~~--~~pdlLa~aDlfIt-hgG---------- 288 (953)
.+.+++..|+.+. .+++..+ .+++.+++.|..... ++ ||+.+|+.+ .+|.+|+.+|+-+. ..|
T Consensus 177 ~~~~i~yaG~l~k-~~~L~~l-~~~~~f~ivG~G~~~~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~ 253 (339)
T 3rhz_A 177 LKREIHFPGNPER-FSFVKEW-KYDIPLKVYTWQNVELPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYC 253 (339)
T ss_dssp EEEEEEECSCTTT-CGGGGGC-CCSSCEEEEESCCCCCCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCC
T ss_pred CCcEEEEeCCcch-hhHHHhC-CCCCeEEEEeCCcccCcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcC
Confidence 3467788888875 2333333 467888888876543 66 999998875 35678865444433 233
Q ss_pred hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 002206 289 YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (953)
Q Consensus 289 ~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~l 346 (953)
.+-+.|+|++|+|+|+.+.. .+++.+++.++|+.++. .+++..+|..+
T Consensus 254 P~Kl~eymA~G~PVI~~~~~------~~~~~v~~~~~G~~~~~----~~e~~~~i~~l 301 (339)
T 3rhz_A 254 SYKLGSFLAAGIPVIVQEGI------ANQELIENNGLGWIVKD----VEEAIMKVKNV 301 (339)
T ss_dssp CHHHHHHHHHTCCEEEETTC------TTTHHHHHHTCEEEESS----HHHHHHHHHHC
T ss_pred hHHHHHHHHcCCCEEEccCh------hHHHHHHhCCeEEEeCC----HHHHHHHHHHh
Confidence 24588999999999987632 35677889999998862 35666666654
No 82
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=85.90 E-value=0.78 Score=53.98 Aligned_cols=86 Identities=10% Similarity=0.044 Sum_probs=55.3
Q ss_pred CCCCeEECCCCCCHHH---HHhhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEE-EEecC
Q 002206 260 LPPNFIKLPKDAYTPD---FMAASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGV-EMIRR 332 (953)
Q Consensus 260 lp~NV~v~~~~~~~pd---lLa~aDlfIth---gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~-~l~~~ 332 (953)
+.+.+.+.++.+. .+ .+..+|+|+-- +|.+|++||+++|||+|..+-..+.. ..-+..+...|..- .+..
T Consensus 497 I~~Rv~F~g~~p~-~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~as-RvgaSlL~~~GLpE~LIA~- 573 (631)
T 3q3e_A 497 LGDSATAHPHSPY-HQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHE-HIDEGLFKRLGLPEWLIAN- 573 (631)
T ss_dssp HGGGEEEECCCCH-HHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHH-HHHHHHHHHTTCCGGGEES-
T ss_pred CCccEEEcCCCCH-HHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHH-HhHHHHHHhcCCCcceecC-
Confidence 3567877777653 34 45679999953 57789999999999999998433322 23345667777753 2322
Q ss_pred CCChhhHHHHHHHHHhCC
Q 002206 333 DLLTGHWKPYLERAISLK 350 (953)
Q Consensus 333 dl~~~~l~~al~~ll~~~ 350 (953)
+ .++..+..-+|.+|+
T Consensus 574 d--~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 574 T--VDEYVERAVRLAENH 589 (631)
T ss_dssp S--HHHHHHHHHHHHHCH
T ss_pred C--HHHHHHHHHHHhCCH
Confidence 1 344555555666655
No 83
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=84.18 E-value=1.5 Score=53.20 Aligned_cols=125 Identities=14% Similarity=0.090 Sum_probs=72.2
Q ss_pred HHHhCCCCCCcEEEEEcCCCCc-hHhHHH---hhC--CCCcEEEEe-CCCCC-----------CC-CCCeEECCCCCCHH
Q 002206 214 RKELGIEDDVKLLILNFGGQPA-GWKLKE---EYL--PSGWKCLVC-GASDS-----------QL-PPNFIKLPKDAYTP 274 (953)
Q Consensus 214 ~~~l~~~~~~~vVlvs~Gs~~~-~~~ll~---~ll--~~~~~~vv~-G~~~~-----------~l-p~NV~v~~~~~~~p 274 (953)
|..++++ +..+||.+|-..-+ ..+++. +++ -|+-++++. ..... .+ ++.+.+.+..+ ..
T Consensus 514 R~~~gLp-~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~-~~ 591 (723)
T 4gyw_A 514 RSQYGLP-EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAP-KE 591 (723)
T ss_dssp GGGGTCC-TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCC-HH
T ss_pred hhhcCCC-CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCC-HH
Confidence 5667886 56788888864433 112222 221 133333333 22110 12 45677766554 24
Q ss_pred HHHh---hcCEEEe---cCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHH
Q 002206 275 DFMA---ASDCMLG---KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (953)
Q Consensus 275 dlLa---~aDlfIt---hgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll 347 (953)
+.|+ .+|+|+- .+|.+|++||+++|||+|.++-..+.- ..-+..|...|..-.+ +.+..+.++..+
T Consensus 592 ~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~s-R~~~s~l~~~gl~e~i------a~~~~~Y~~~a~ 663 (723)
T 4gyw_A 592 EHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLAS-RVAASQLTCLGCLELI------AKNRQEYEDIAV 663 (723)
T ss_dssp HHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGG-THHHHHHHHHTCGGGB------CSSHHHHHHHHH
T ss_pred HHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccH-hHHHHHHHHcCCcccc------cCCHHHHHHHHH
Confidence 6554 5999995 467799999999999999998433332 2456677777765332 334445554444
No 84
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=83.09 E-value=1.1 Score=51.58 Aligned_cols=77 Identities=17% Similarity=0.083 Sum_probs=55.3
Q ss_pred CeEE-CCCCC--CHHHHHhhcCEEEecC---Chh-HHHHHHHcCC-----cEEEEeCCCCCchHHHHHHHHHcCcEEEEe
Q 002206 263 NFIK-LPKDA--YTPDFMAASDCMLGKI---GYG-TVSEALAYKL-----PFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (953)
Q Consensus 263 NV~v-~~~~~--~~pdlLa~aDlfIthg---G~~-Tv~Eal~~Gv-----P~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~ 330 (953)
+|++ .++++ .++.+++.||+||..+ |+| ++.||++||+ |+|+....+..++ + ..|+.++
T Consensus 332 ~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~------l---~~g~lv~ 402 (482)
T 1uqt_A 332 PLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE------L---TSALIVN 402 (482)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT------C---TTSEEEC
T ss_pred eEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH------h---CCeEEEC
Confidence 3554 35443 4568899999999744 554 7899999998 7777664444555 2 2477888
Q ss_pred cCCCChhhHHHHHHHHHhCC
Q 002206 331 RRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 331 ~~dl~~~~l~~al~~ll~~~ 350 (953)
+.| .+.+.++|.++|+++
T Consensus 403 p~d--~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 403 PYD--RDEVAAALDRALTMS 420 (482)
T ss_dssp TTC--HHHHHHHHHHHHTCC
T ss_pred CCC--HHHHHHHHHHHHcCC
Confidence 776 468999999999765
No 85
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=81.08 E-value=1.5 Score=52.16 Aligned_cols=69 Identities=13% Similarity=0.028 Sum_probs=44.4
Q ss_pred HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHc-------CcEEEEec-CCCChhhHH
Q 002206 273 TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-------QGGVEMIR-RDLLTGHWK 340 (953)
Q Consensus 273 ~pdlLa~aDlfIthg---G-~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~-------G~g~~l~~-~dl~~~~l~ 340 (953)
++++|+.||+||.-+ | ..+++||+++|+|+|+...+++.| .+... +.|+.+.. ....++.+.
T Consensus 512 ~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d------~V~dg~~~~~~~~tG~lV~~rd~~d~ee~a 585 (725)
T 3nb0_A 512 YDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGS------YMEDLIETNQAKDYGIYIVDRRFKAPDESV 585 (725)
T ss_dssp HHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHH------HHHTTSCHHHHHHTTEEEECCSSSCHHHHH
T ss_pred HHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhh------hhhccccccCCCCceEEEeCCCCCCHHHHH
Confidence 568999999999754 2 258999999999999987554332 23321 34666643 233344444
Q ss_pred HHHHHHH
Q 002206 341 PYLERAI 347 (953)
Q Consensus 341 ~al~~ll 347 (953)
++|.+++
T Consensus 586 eaLa~aL 592 (725)
T 3nb0_A 586 EQLVDYM 592 (725)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555444
No 86
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=73.03 E-value=12 Score=38.86 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=23.0
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
|.++.+ +.--|. |..-..+|+++|.+.| +|+++.+.
T Consensus 1 Mp~ILl---TNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~ 36 (251)
T 2wqk_A 1 MPTFLL---VNDDGY-FSPGINALREALKSLG-RVVVVAPD 36 (251)
T ss_dssp -CEEEE---ECSSCT-TCHHHHHHHHHHTTTS-EEEEEEES
T ss_pred CCEEEE---EcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeC
Confidence 555555 555553 2233558899999998 58888664
No 87
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=72.64 E-value=4.1 Score=46.77 Aligned_cols=78 Identities=13% Similarity=-0.027 Sum_probs=57.0
Q ss_pred CeEECCCCC--CHHHHHhhcCEEEecC---Chh-HHHHHHHcC---CcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCC
Q 002206 263 NFIKLPKDA--YTPDFMAASDCMLGKI---GYG-TVSEALAYK---LPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD 333 (953)
Q Consensus 263 NV~v~~~~~--~~pdlLa~aDlfIthg---G~~-Tv~Eal~~G---vP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~d 333 (953)
.|+++++.+ .++.+++.||+|+..+ |+| +..|+++|| .|+|+-...+..++ +. ..|+.+++.|
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~------l~--~~allVnP~D 424 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEV------LG--EYCRSVNPFD 424 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHH------HG--GGSEEECTTB
T ss_pred CEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHH------hC--CCEEEECCCC
Confidence 477666543 3458888999999754 776 678999996 77777664443333 32 2478899887
Q ss_pred CChhhHHHHHHHHHhCC
Q 002206 334 LLTGHWKPYLERAISLK 350 (953)
Q Consensus 334 l~~~~l~~al~~ll~~~ 350 (953)
. +.+.++|.++|+++
T Consensus 425 ~--~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 425 L--VEQAEAISAALAAG 439 (496)
T ss_dssp H--HHHHHHHHHHHHCC
T ss_pred H--HHHHHHHHHHHcCC
Confidence 4 69999999999876
No 88
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=70.90 E-value=14 Score=44.65 Aligned_cols=152 Identities=13% Similarity=0.075 Sum_probs=83.0
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCC-----------c----hHhHHHhhCCCCcEEEEeCCC-----C--CCCCCCeEECC
Q 002206 211 KEVRKELGIEDDVKLLILNFGGQP-----------A----GWKLKEEYLPSGWKCLVCGAS-----D--SQLPPNFIKLP 268 (953)
Q Consensus 211 ~e~~~~l~~~~~~~vVlvs~Gs~~-----------~----~~~ll~~ll~~~~~~vv~G~~-----~--~~lp~NV~v~~ 268 (953)
+++++.+++++++++|+.+- +.- . ....+.+.+..++.+++--.. . ...+..+....
T Consensus 526 ~~~~~~~~~~~~kk~ILyaP-T~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~Hp~~~~~~~~~~~~~~~~~~~ 604 (729)
T 3l7i_A 526 DEIRTHLNLPSDKKVIMYAP-TWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRMHYLISNALDLSGYENFAIDVS 604 (729)
T ss_dssp HHHHHHTTCCSSCEEEEECC-CCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECCCHHHHTTCCCTTCTTTEEECT
T ss_pred HHHHHHhCCCCCCeEEEEee-eeeCCccccccccccchhhHHHHHHHHcCCCeEEEEecCcchhccccccccCCcEEeCC
Confidence 45778888887777776653 111 0 012222333456655552110 0 11233444333
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCC-------ChhhHHH
Q 002206 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL-------LTGHWKP 341 (953)
Q Consensus 269 ~~~~~pdlLa~aDlfIthgG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl-------~~~~l~~ 341 (953)
....+.++|..+|++||=-- +.+.|.+..++|+|+...+ .|+.. .. --|...+..+. +.++|.+
T Consensus 605 ~~~di~~ll~~aD~lITDyS-Sv~fD~~~l~kPiif~~~D--~~~Y~-----~~-~rg~y~d~~~~~pg~~~~~~~eL~~ 675 (729)
T 3l7i_A 605 NYNDVSELFLISDCLITDYS-SVMFDYGILKRPQFFFAYD--IDKYD-----KG-LRGFYMNYMEDLPGPIYTEPYGLAK 675 (729)
T ss_dssp TCSCHHHHHHTCSEEEESSC-THHHHHGGGCCCEEEECTT--TTTTT-----SS-CCSBSSCTTSSSSSCEESSHHHHHH
T ss_pred CCcCHHHHHHHhCEEEeech-HHHHhHHhhCCCEEEecCC--HHHHh-----hc-cCCcccChhHhCCCCeECCHHHHHH
Confidence 22356699999999999655 5788999999999998742 23311 10 01333333221 2345666
Q ss_pred HHHHHHhCCCCcc-------------CCCCHHHHHHHHHHHHHc
Q 002206 342 YLERAISLKPCYE-------------GGINGGEVAAHILQETAI 372 (953)
Q Consensus 342 al~~ll~~~~~~~-------------~~~~g~~~~A~~i~~~l~ 372 (953)
+|++.......+. .....++++++.|.+...
T Consensus 676 ~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 676 ELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred HHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 6655543111110 456778888888877644
No 89
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=69.00 E-value=25 Score=38.24 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=35.4
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
.+|+++.| +..-.|.|=.+-+.++|..|+++|++|.++...+.
T Consensus 23 ~~~~~i~v--~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 23 KDGTKYIM--FGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCSCEEEE--EECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred cCCCEEEE--EeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 34555444 66778899999999999999999999999988763
No 90
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=66.98 E-value=11 Score=40.20 Aligned_cols=120 Identities=15% Similarity=0.157 Sum_probs=65.9
Q ss_pred CCcEEEEEcCCCCch--H------hHHHhhCCCCcEEEEe-CCCCC--------CCCCCeEECCCCC--CHHHHHhhcCE
Q 002206 222 DVKLLILNFGGQPAG--W------KLKEEYLPSGWKCLVC-GASDS--------QLPPNFIKLPKDA--YTPDFMAASDC 282 (953)
Q Consensus 222 ~~~vVlvs~Gs~~~~--~------~ll~~ll~~~~~~vv~-G~~~~--------~lp~NV~v~~~~~--~~pdlLa~aDl 282 (953)
+++.|.+..|+.... + ++...+...++.++++ |...+ ..-+++.+.+... .+..++++||+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l 256 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKF 256 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSE
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCE
Confidence 567788888875431 1 2222344446777765 53211 0123555554332 23378889999
Q ss_pred EEec-CChhHHHHHHHcCCcEEEEeCCCCCchHHHHHHHHHcC-cEEEEe-----cCCCChhhHHHHHHHHHhC
Q 002206 283 MLGK-IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQ-GGVEMI-----RRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 283 fIth-gG~~Tv~Eal~~GvP~l~iP~~~~~DQ~~NA~~l~~~G-~g~~l~-----~~dl~~~~l~~al~~ll~~ 349 (953)
+||. .|..-+ |.+.|+|+|++=-+. + ..+-.=.| ....+. ..+++++.+.++++++++.
T Consensus 257 ~I~~DSG~~Hl--Aaa~g~P~v~lfg~t--~----p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 257 VVSVDTGLSHL--TAALDRPNITVYGPT--D----PGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEESSHHHHH--HHHTTCCEEEEESSS--C----HHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred EEecCCcHHHH--HHHcCCCEEEEECCC--C----hhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9998 564333 777999999983111 1 11110011 112222 2467788888888888754
No 91
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=60.58 E-value=40 Score=36.06 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=35.3
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
+.|+++.| +..-.|.|=.+-+.++|..|+++|++|.++...+.
T Consensus 11 ~gm~~i~v--~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 11 KGKTTFVF--IGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp TTBCEEEE--EEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEE--EeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34555444 66778899999999999999999999999988763
No 92
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=52.30 E-value=35 Score=36.84 Aligned_cols=39 Identities=15% Similarity=0.259 Sum_probs=33.2
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
+|+++..-.|.|=.+.+.++|..|+++|++|.++...+.
T Consensus 17 ~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 17 RWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 444567778899999999999999999999999988753
No 93
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=52.26 E-value=14 Score=34.11 Aligned_cols=43 Identities=5% Similarity=-0.079 Sum_probs=29.7
Q ss_pred CCCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 10 SASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 10 ~~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
...|+++.|.+....++......++.+|......||+|+++-.
T Consensus 12 ~~~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~ 54 (134)
T 3mc3_A 12 EEQXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFM 54 (134)
T ss_dssp --CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence 4446666664433223677888889999999999999987633
No 94
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=50.70 E-value=64 Score=33.24 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=24.1
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
|+||+ +..-|. |..-..+|+++|.+.| +|+++.+.
T Consensus 2 M~ILl-TNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~ 36 (251)
T 2phj_A 2 PTFLL-VNDDGY-FSPGINALREALKSLG-RVVVVAPD 36 (251)
T ss_dssp CEEEE-ECSSCT-TCHHHHHHHHHHTTTS-EEEEEEES
T ss_pred CEEEE-ECCCCC-CCHHHHHHHHHHHhcC-CEEEEecC
Confidence 45543 455553 3344678999999988 99999765
No 95
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=49.45 E-value=16 Score=38.47 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=28.4
Q ss_pred CCCCceEEEEEEecCCCcchHHHH--HHHHHHHHHCCCcEEEEeCC
Q 002206 10 SASSKHLVFAYYVTGHGFGHATRV--VEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 10 ~~~m~~l~il~~v~~~G~GH~~r~--l~La~~L~~rGHeVt~is~~ 53 (953)
+-.|+.||||++..-|-...++.. ..++++|.++||+|+++...
T Consensus 17 ~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy 62 (280)
T 4gi5_A 17 NLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLY 62 (280)
T ss_dssp -----CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred cchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 455788888877755554444443 36789999999999998654
No 96
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=49.29 E-value=60 Score=35.66 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=30.7
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
|+++..-.|.|-.+.+..+|..|+++|+.|.++.. +.
T Consensus 4 i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 4 ILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp EEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 44455556799999999999999999999999987 64
No 97
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=48.16 E-value=20 Score=31.84 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=28.6
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHC-CC-cEEEE
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISA-GH-DVHVV 50 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~r-GH-eVt~i 50 (953)
|+++.|++....+|......++.+|..+.+. || +|.++
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vf 40 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLF 40 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEE
Confidence 6666665444444667788889999999999 99 99766
No 98
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=46.17 E-value=32 Score=33.91 Aligned_cols=50 Identities=14% Similarity=-0.017 Sum_probs=32.3
Q ss_pred HHhhcCEEEe-cCChhHHHHHH---------HcCCcEEEEeCCCCCchHHH-HHHHHHcCc
Q 002206 276 FMAASDCMLG-KIGYGTVSEAL---------AYKLPFVFVRRDYFNEEPFL-RNMLEFYQG 325 (953)
Q Consensus 276 lLa~aDlfIt-hgG~~Tv~Eal---------~~GvP~l~iP~~~~~DQ~~N-A~~l~~~G~ 325 (953)
++..+|+||. -||+||.-|.. .+++|++++....|.+.... .+.+.+.|+
T Consensus 105 m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gf 165 (189)
T 3sbx_A 105 MEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGY 165 (189)
T ss_dssp HHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTTS
T ss_pred HHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCC
Confidence 3457999997 46778877654 26999999986566654221 134444443
No 99
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=44.70 E-value=36 Score=35.22 Aligned_cols=30 Identities=20% Similarity=0.217 Sum_probs=23.7
Q ss_pred CCcEEEE-CC--CchHHHHHHHhCCcEEEEecC
Q 002206 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTNF 147 (953)
Q Consensus 118 kpDlVV~-D~--~~~~~~~A~~~giP~I~is~~ 147 (953)
.||+||+ |. ...++.=|.++|||+|++.+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 6999985 54 566777889999999999543
No 100
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=43.87 E-value=26 Score=35.43 Aligned_cols=55 Identities=18% Similarity=0.101 Sum_probs=35.1
Q ss_pred CCHH---HHH-hhcCEEEe-cCChhHHHHHH---------HcCCcEEEEeCCCCCchHHH-HHHHHHcCc
Q 002206 271 AYTP---DFM-AASDCMLG-KIGYGTVSEAL---------AYKLPFVFVRRDYFNEEPFL-RNMLEFYQG 325 (953)
Q Consensus 271 ~~~p---dlL-a~aDlfIt-hgG~~Tv~Eal---------~~GvP~l~iP~~~~~DQ~~N-A~~l~~~G~ 325 (953)
.+|+ .+| ..+|+||. -||+||.-|.. .+++|++++...+|.+...+ .+.+.+.|+
T Consensus 93 ~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gf 162 (216)
T 1ydh_A 93 ADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGF 162 (216)
T ss_dssp SSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCC
Confidence 3566 344 56999986 57788877666 47999999986556554222 134444443
No 101
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=43.22 E-value=25 Score=32.70 Aligned_cols=39 Identities=23% Similarity=0.108 Sum_probs=29.1
Q ss_pred CCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEE
Q 002206 12 SSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (953)
Q Consensus 12 ~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~i 50 (953)
.|+++.|++..+.+|.-....++.++.++...||+|.++
T Consensus 4 ~Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vf 42 (136)
T 2hy5_B 4 VVKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVL 42 (136)
T ss_dssp -CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEE
T ss_pred chhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEE
Confidence 477777755445555557777899999999999999766
No 102
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=40.06 E-value=35 Score=30.67 Aligned_cols=38 Identities=16% Similarity=0.276 Sum_probs=28.9
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEE
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~i 50 (953)
|+++.|++-.+.+|.....-++.++.++...||+|.++
T Consensus 1 Mkk~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vf 38 (119)
T 2d1p_B 1 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVF 38 (119)
T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEE
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEE
Confidence 77777765555555556677889999999999999765
No 103
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=36.27 E-value=43 Score=30.51 Aligned_cols=33 Identities=15% Similarity=0.340 Sum_probs=24.9
Q ss_pred EEEEecC--CCcchHHHHHHHHHHHHHCCCcE-EEE
Q 002206 18 FAYYVTG--HGFGHATRVVEVVRNLISAGHDV-HVV 50 (953)
Q Consensus 18 il~~v~~--~G~GH~~r~l~La~~L~~rGHeV-t~i 50 (953)
+++.++. +|.-....++.++.++.+.||+| .++
T Consensus 3 ~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vf 38 (130)
T 2hy5_A 3 FALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVF 38 (130)
T ss_dssp EEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEE
Confidence 3344444 55567788899999999999999 765
No 104
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=35.86 E-value=42 Score=33.33 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=27.2
Q ss_pred HHhhcCEEEe-cCChhHHHHHH---H------cCCcEEEEeCCCCCch
Q 002206 276 FMAASDCMLG-KIGYGTVSEAL---A------YKLPFVFVRRDYFNEE 313 (953)
Q Consensus 276 lLa~aDlfIt-hgG~~Tv~Eal---~------~GvP~l~iP~~~~~DQ 313 (953)
++..+|+||. -||+||.-|.. . +++|++++....|.+.
T Consensus 114 m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw~~ 161 (199)
T 3qua_A 114 MEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDG 161 (199)
T ss_dssp HHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTTHH
T ss_pred HHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccchH
Confidence 3356999997 46777876654 3 6999999986556554
No 105
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=32.26 E-value=97 Score=30.94 Aligned_cols=39 Identities=18% Similarity=0.362 Sum_probs=23.2
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHCC--CcEE-EEeCC
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAG--HDVH-VVTGA 53 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rG--HeVt-~is~~ 53 (953)
..|.+++|.++++|. ||. +.++.+++.+.+ ++|. ++|..
T Consensus 3 ~~m~~~ri~vl~SG~--gsn--l~all~~~~~~~l~~~I~~Visn~ 44 (209)
T 4ds3_A 3 GSMKRNRVVIFISGG--GSN--MEALIRAAQAPGFPAEIVAVFSDK 44 (209)
T ss_dssp ---CCEEEEEEESSC--CHH--HHHHHHHHTSTTCSEEEEEEEESC
T ss_pred CcCCCccEEEEEECC--cHH--HHHHHHHHHcCCCCcEEEEEEECC
Confidence 348888887777655 544 556777776543 5776 45543
No 106
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=30.47 E-value=25 Score=31.95 Aligned_cols=41 Identities=15% Similarity=0.236 Sum_probs=26.9
Q ss_pred HHHHHHHHcCCCcEEEECCCc---hHHHHH---HHhCCcEEEEecCC
Q 002206 108 KDEVEWLNSIKADLVVSDVVP---VACRAA---ADAGIRSVCVTNFS 148 (953)
Q Consensus 108 ~~~~~~L~~~kpDlVV~D~~~---~~~~~A---~~~giP~I~is~~~ 148 (953)
.+.++.+++.+||+|+.|... -+..++ +..++|+|.+|.+.
T Consensus 43 ~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa~~ 89 (123)
T 2lpm_A 43 QEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGYG 89 (123)
T ss_dssp HHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCTTC
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEecCc
Confidence 344677788999999999722 233333 33479988876543
No 107
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=29.95 E-value=61 Score=32.73 Aligned_cols=40 Identities=8% Similarity=0.021 Sum_probs=32.5
Q ss_pred CCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 11 ASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 11 ~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
+.|+.+.| ..+..|.|=...+..|++.|+++|.+|.++-+
T Consensus 2 ~~mk~i~I--tgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFI--IGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEE--EESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEE--EeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 34655444 56788899999999999999999999998743
No 108
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=27.97 E-value=36 Score=33.12 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=27.4
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
.+|++.++|. ........+++.|+++|++|.++-..
T Consensus 6 k~IllgvTGs--~aa~k~~~ll~~L~~~g~~V~vv~T~ 41 (175)
T 3qjg_A 6 ENVLICLCGS--VNSINISHYIIELKSKFDEVNVIAST 41 (175)
T ss_dssp CEEEEEECSS--GGGGGHHHHHHHHTTTCSEEEEEECT
T ss_pred CEEEEEEeCH--HHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4666676644 56667899999999999999877443
No 109
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=26.87 E-value=41 Score=33.51 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=29.2
Q ss_pred CceEEEEEEecCCCcchHH-HHHHHHHHHHHCCCcEEEEeC
Q 002206 13 SKHLVFAYYVTGHGFGHAT-RVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~-r~l~La~~L~~rGHeVt~is~ 52 (953)
++..+|++.++|. +... ....+++.|.++|++|+++-.
T Consensus 5 l~~k~I~lgiTGs--~aa~~k~~~ll~~L~~~g~eV~vv~T 43 (201)
T 3lqk_A 5 FAGKHVGFGLTGS--HCTYHEVLPQMERLVELGAKVTPFVT 43 (201)
T ss_dssp CTTCEEEEECCSC--GGGGGGTHHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEEEECh--HHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 3445676677654 5666 799999999999999998744
No 110
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=26.08 E-value=2e+02 Score=28.68 Aligned_cols=34 Identities=18% Similarity=0.383 Sum_probs=22.1
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCC--cEE-EEeCC
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGH--DVH-VVTGA 53 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGH--eVt-~is~~ 53 (953)
++|+|+++|.| + .+.++.++|.+.+| +|. ++|..
T Consensus 2 ~rI~vl~SG~g--~--~~~~~l~~l~~~~~~~~i~~Vvs~~ 38 (216)
T 2ywr_A 2 LKIGVLVSGRG--S--NLQAIIDAIESGKVNASIELVISDN 38 (216)
T ss_dssp EEEEEEECSCC--H--HHHHHHHHHHTTSSCEEEEEEEESC
T ss_pred CEEEEEEeCCc--H--HHHHHHHHHHhCCCCCeEEEEEeCC
Confidence 35555655554 3 47788899998888 664 45553
No 111
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=25.99 E-value=57 Score=30.26 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=20.7
Q ss_pred CcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 26 GFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 26 G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
|.|++- ..+++.|.++||+|+++...
T Consensus 10 G~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 10 GHSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 446554 67889999999999999775
No 112
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=25.92 E-value=2.7e+02 Score=27.99 Aligned_cols=34 Identities=12% Similarity=0.273 Sum_probs=22.3
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHC--CCcEE-EEeCC
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVH-VVTGA 53 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt-~is~~ 53 (953)
++|+|+++|.| + .+.++.++|.+. +++|. |+|..
T Consensus 23 ~rI~~l~SG~g--~--~~~~~l~~l~~~~~~~~I~~Vvt~~ 59 (229)
T 3auf_A 23 IRIGVLISGSG--T--NLQAILDGCREGRIPGRVAVVISDR 59 (229)
T ss_dssp EEEEEEESSCC--H--HHHHHHHHHHTTSSSEEEEEEEESS
T ss_pred cEEEEEEeCCc--H--HHHHHHHHHHhCCCCCeEEEEEcCC
Confidence 56666666554 3 367888898876 57875 45553
No 113
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=25.09 E-value=77 Score=29.03 Aligned_cols=39 Identities=15% Similarity=0.066 Sum_probs=26.4
Q ss_pred HHHHHcCCCcEEEECCC---chHHHHHHH-------hCCcEEEEecCCh
Q 002206 111 VEWLNSIKADLVVSDVV---PVACRAAAD-------AGIRSVCVTNFSW 149 (953)
Q Consensus 111 ~~~L~~~kpDlVV~D~~---~~~~~~A~~-------~giP~I~is~~~~ 149 (953)
.+.+++.+||+|+.|.. .-|..+.+. ..+|+|.++....
T Consensus 50 l~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 50 LPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred HHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 45566778999999972 224444433 2599999987663
No 114
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=24.84 E-value=89 Score=30.19 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=32.2
Q ss_pred EEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 002206 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (953)
Q Consensus 18 il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~~ 55 (953)
|.+..+-.|.|=.+-+..||..|+++|++|.++...+.
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 44466777899999999999999999999999977654
No 115
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=24.60 E-value=1e+02 Score=26.75 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=25.0
Q ss_pred HHHHHcCCCcEEEECCC---chHHHHHHH-------hCCcEEEEecCC
Q 002206 111 VEWLNSIKADLVVSDVV---PVACRAAAD-------AGIRSVCVTNFS 148 (953)
Q Consensus 111 ~~~L~~~kpDlVV~D~~---~~~~~~A~~-------~giP~I~is~~~ 148 (953)
.+.+.+.+||+|+.|.. .-+..+.+. .++|+|.++...
T Consensus 39 l~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 39 LEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 45567788999999962 223333332 258999988754
No 116
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=24.47 E-value=84 Score=29.99 Aligned_cols=69 Identities=14% Similarity=0.135 Sum_probs=41.5
Q ss_pred HHHhhcCEEEec---CChhHHHH---HHHcCCcEEEEeCCCCCchHHHHHHHHHcCc---EEEEecCCCChhhHHHHHHH
Q 002206 275 DFMAASDCMLGK---IGYGTVSE---ALAYKLPFVFVRRDYFNEEPFLRNMLEFYQG---GVEMIRRDLLTGHWKPYLER 345 (953)
Q Consensus 275 dlLa~aDlfIth---gG~~Tv~E---al~~GvP~l~iP~~~~~DQ~~NA~~l~~~G~---g~~l~~~dl~~~~l~~al~~ 345 (953)
++|..||++|-- ...||.+| |.+.|+|++++-... .+...|+. +..... -..+.+ + .+++...|.+
T Consensus 73 ~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~-~~~~~n~M-~~g~~~~~~~~~~~y-~--~~el~~~l~~ 147 (165)
T 2khz_A 73 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQ-SGRVLSAM-IRGAADGSRFQVWDY-A--EGEVETMLDR 147 (165)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECTT-TTCCCCHH-HHHTCCSSSEEEEEC-C--TTTHHHHHHH
T ss_pred HHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCC-CCCcchhh-hcccCccceeEEEec-C--HHHHHHHHHH
Confidence 677889999854 47889999 467899999985322 11233443 443322 122333 3 3466666766
Q ss_pred HHh
Q 002206 346 AIS 348 (953)
Q Consensus 346 ll~ 348 (953)
.+.
T Consensus 148 ~~~ 150 (165)
T 2khz_A 148 YFE 150 (165)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 117
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=23.76 E-value=90 Score=31.31 Aligned_cols=43 Identities=28% Similarity=0.348 Sum_probs=30.0
Q ss_pred CCHH---HHH-hhcCEEEe-cCChhHHHHHH---H------cCCcEEEEeCCCCCch
Q 002206 271 AYTP---DFM-AASDCMLG-KIGYGTVSEAL---A------YKLPFVFVRRDYFNEE 313 (953)
Q Consensus 271 ~~~p---dlL-a~aDlfIt-hgG~~Tv~Eal---~------~GvP~l~iP~~~~~DQ 313 (953)
.+|+ .+| ..+|+||. -||+||.-|.. . +++|++++...+|.+.
T Consensus 97 ~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~ 153 (215)
T 2a33_A 97 ADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNS 153 (215)
T ss_dssp SSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHH
T ss_pred CCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHH
Confidence 4566 444 46999886 57788877665 2 4899999986556554
No 118
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=22.89 E-value=1e+02 Score=28.19 Aligned_cols=38 Identities=13% Similarity=0.348 Sum_probs=26.3
Q ss_pred CceEEEEEEecCCCcchHHHH-HHHHHHHHHCCCcEEEEeCC
Q 002206 13 SKHLVFAYYVTGHGFGHATRV-VEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~-l~La~~L~~rGHeVt~is~~ 53 (953)
|+++.|+|++ . .|+.... ..+++.|.++|++|.++...
T Consensus 1 M~ki~I~y~S-~--tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGS-S--TGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEEC-S--SSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEEC-C--CchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 6778886654 3 3555444 47888999999999988654
No 119
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=22.74 E-value=1.2e+02 Score=30.09 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=32.4
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
.|.+.....|.|=.+-+..||..|+++|++|.++...+
T Consensus 4 ~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 44456677889999999999999999999999997654
No 120
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=22.46 E-value=52 Score=32.88 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=27.7
Q ss_pred ceEEEEEEecCCCcchHHH-HHHHHHHHHHCCCcEEEEeC
Q 002206 14 KHLVFAYYVTGHGFGHATR-VVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 14 ~~l~il~~v~~~G~GH~~r-~l~La~~L~~rGHeVt~is~ 52 (953)
+..+|++.++|. +...- ...+++.|+++|++|.++-.
T Consensus 4 ~~k~IllgiTGs--iaayk~~~~ll~~L~~~g~eV~vv~T 41 (207)
T 3mcu_A 4 KGKRIGFGFTGS--HCTYEEVMPHLEKLIAEGAEVRPVVS 41 (207)
T ss_dssp TTCEEEEEECSC--GGGGTTSHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEEECh--HHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 345677788773 44553 88999999999999987744
No 121
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=22.19 E-value=49 Score=34.52 Aligned_cols=53 Identities=11% Similarity=0.057 Sum_probs=39.5
Q ss_pred hcCEEEecCChhHHHHHHHc------CCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhC
Q 002206 279 ASDCMLGKIGYGTVSEALAY------KLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (953)
Q Consensus 279 ~aDlfIthgG~~Tv~Eal~~------GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~ 349 (953)
.+|++|+-||-||+.+++.. ++|++.||.. ..|+. .++.++++.++++.+++.
T Consensus 35 ~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-------------~lgfl-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-------------HLGFY-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-------------SCCSS-----CCBCGGGHHHHHHHHHTT
T ss_pred CCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-------------CCCcC-----CcCCHHHHHHHHHHHHcC
Confidence 47999999999999999875 8999999842 12321 233467788889888754
No 122
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=22.05 E-value=84 Score=29.70 Aligned_cols=69 Identities=17% Similarity=0.192 Sum_probs=42.1
Q ss_pred HHHhhcCEEEe---cCChhHHHH---HHHcCCcEEEEeCCCCCchHHHHHHHHHcC---cEEEEecCCCChhhHHHHHHH
Q 002206 275 DFMAASDCMLG---KIGYGTVSE---ALAYKLPFVFVRRDYFNEEPFLRNMLEFYQ---GGVEMIRRDLLTGHWKPYLER 345 (953)
Q Consensus 275 dlLa~aDlfIt---hgG~~Tv~E---al~~GvP~l~iP~~~~~DQ~~NA~~l~~~G---~g~~l~~~dl~~~~l~~al~~ 345 (953)
+.|..||++|. ....||.+| |.+.|+|++++-.+... + ....++.-.. .-.+...++ +++...|.+
T Consensus 64 ~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~-~-~ls~mi~G~~~~~~~~~~~Y~~---~el~~il~~ 138 (152)
T 4fyk_A 64 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSG-R-VLSAMIRGAADGSRFQVWDYAE---GEVETMLDR 138 (152)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEEECGGGS-C-CCCHHHHHHCCSSSEEEEECCT---TCHHHHHHH
T ss_pred HHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCcc-c-hhHHHHcCCCCCCeEEEEEecH---HHHHHHHHH
Confidence 56778999996 456789998 57889999998642211 1 1233444332 222333433 577777777
Q ss_pred HHh
Q 002206 346 AIS 348 (953)
Q Consensus 346 ll~ 348 (953)
.++
T Consensus 139 f~~ 141 (152)
T 4fyk_A 139 YFE 141 (152)
T ss_dssp HHC
T ss_pred HHH
Confidence 664
No 123
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=21.31 E-value=1.2e+02 Score=30.38 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=26.0
Q ss_pred EEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 16 l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
.+|++.++|. .-..-...+++.|.++|++|.++-.
T Consensus 5 k~IllgvTGa--iaa~k~~~ll~~L~~~g~eV~vv~T 39 (209)
T 3zqu_A 5 ERITLAMTGA--SGAQYGLRLLDCLVQEEREVHFLIS 39 (209)
T ss_dssp SEEEEEECSS--SCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEEECH--HHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3455566544 5556689999999999999988744
No 124
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.08 E-value=51 Score=34.03 Aligned_cols=54 Identities=19% Similarity=0.089 Sum_probs=40.6
Q ss_pred hcCEEEecCChhHHHHHHHc---CCcEEEEeCCCCCchHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHHhCC
Q 002206 279 ASDCMLGKIGYGTVSEALAY---KLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (953)
Q Consensus 279 ~aDlfIthgG~~Tv~Eal~~---GvP~l~iP~~~~~DQ~~NA~~l~~~G~g~~l~~~dl~~~~l~~al~~ll~~~ 350 (953)
.+|++|+-||-||+.+++.. ++|+++++... .|.- . ++.+.++.++++.+++..
T Consensus 41 ~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G~-------------~Gfl--~---~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 41 TADLIVVVGGDGTVLKAAKKAADGTPMVGFKAGR-------------LGFL--T---SYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CCSEEEEEECHHHHHHHHTTBCTTCEEEEEESSS-------------CCSS--C---CBCGGGHHHHHHHHHTTC
T ss_pred CCCEEEEEeCcHHHHHHHHHhCCCCCEEEEECCC-------------CCcc--C---cCCHHHHHHHHHHHHcCC
Confidence 48999999999999999987 89999998321 2222 2 234678888998888543
No 125
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=21.03 E-value=1.6e+02 Score=29.78 Aligned_cols=39 Identities=13% Similarity=0.200 Sum_probs=32.6
Q ss_pred eEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCCC
Q 002206 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (953)
Q Consensus 15 ~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~~ 54 (953)
+++| |+...+|.|=.+.++.++.+|.++|+.|.++...+
T Consensus 6 ~l~I-~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKV-FLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEE-EEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEE-EEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4666 44678889999999999999999999999886655
No 126
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=20.42 E-value=2.1e+02 Score=28.44 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=21.5
Q ss_pred CceEEEEEEecCCCcchHHHHHHHHHHHHHC--CCcEEE-EeC
Q 002206 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHV-VTG 52 (953)
Q Consensus 13 m~~l~il~~v~~~G~GH~~r~l~La~~L~~r--GHeVt~-is~ 52 (953)
|+++.| +++ |.|+. +.++.++|.+. +|+|.. +|.
T Consensus 3 m~ki~v--l~s--G~g~~--~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 3 MKRLAV--FAS--GSGTN--FQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp CEEEEE--ECC--SSCHH--HHHHHHHHHTTCCCEEEEEEEES
T ss_pred CcEEEE--EEE--CCcHH--HHHHHHHHHhCCCCCeEEEEEeC
Confidence 655555 444 44553 66788888887 688864 454
No 127
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=20.25 E-value=83 Score=31.97 Aligned_cols=29 Identities=28% Similarity=0.482 Sum_probs=22.8
Q ss_pred CCcEEEE-CC--CchHHHHHHHhCCcEEEEec
Q 002206 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (953)
Q Consensus 118 kpDlVV~-D~--~~~~~~~A~~~giP~I~is~ 146 (953)
.||+||+ |. ...++.=|.++|||+|++.+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivD 188 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLID 188 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEec
Confidence 4999985 54 55677778999999999844
No 128
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=20.20 E-value=1.2e+02 Score=29.75 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=25.0
Q ss_pred EEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeC
Q 002206 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (953)
Q Consensus 17 ~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~ 52 (953)
+|++.++|.. | ..-...+++.|.++|++|.++-.
T Consensus 3 ~IllgvTGs~-a-a~k~~~l~~~L~~~g~~V~vv~T 36 (189)
T 2ejb_A 3 KIALCITGAS-G-VIYGIKLLQVLEELDFSVDLVIS 36 (189)
T ss_dssp EEEEEECSST-T-HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEEECHH-H-HHHHHHHHHHHHHCCCEEEEEEC
Confidence 3444666542 3 45788999999999999987744
No 129
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=20.09 E-value=68 Score=32.07 Aligned_cols=41 Identities=10% Similarity=0.108 Sum_probs=27.4
Q ss_pred CCCCceEEEEEEecCCCcchHHHHHHHHHHHHHCCCcEEEEeCC
Q 002206 10 SASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (953)
Q Consensus 10 ~~~m~~l~il~~v~~~G~GH~~r~l~La~~L~~rGHeVt~is~~ 53 (953)
+..|+..+|++.++|. ........+++.|.++| +|.++-..
T Consensus 14 ~~~l~~k~IllgvTGs--iaa~k~~~ll~~L~~~g-~V~vv~T~ 54 (209)
T 1mvl_A 14 NTTPRKPRVLLAASGS--VAAIKFGNLCHCFTEWA-EVRAVVTK 54 (209)
T ss_dssp -----CCEEEEEECSS--GGGGGHHHHHHHHHTTS-EEEEEECT
T ss_pred ccccCCCEEEEEEeCc--HHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 4556667887777655 34455889999999999 99877543
Done!