Query 002208
Match_columns 953
No_of_seqs 590 out of 3679
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 18:58:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002208.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002208hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 9E-200 2E-204 1635.2 50.3 942 1-953 1-942 (942)
2 KOG0202 Ca2+ transporting ATPa 100.0 9E-143 2E-147 1220.8 59.2 823 16-849 2-970 (972)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 1E-133 2E-138 1230.9 87.9 753 36-808 1-755 (755)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-132 6E-137 1246.0 90.1 821 15-849 4-1049(1053)
5 PRK10517 magnesium-transportin 100.0 6E-132 1E-136 1228.3 92.1 808 17-849 48-899 (902)
6 PRK15122 magnesium-transportin 100.0 2E-131 4E-136 1225.8 91.5 817 16-848 25-898 (903)
7 COG0474 MgtA Cation transport 100.0 2E-132 5E-137 1235.5 81.4 782 14-807 19-872 (917)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 1E-130 3E-135 1217.2 92.3 810 16-848 13-863 (867)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-126 4E-131 1196.8 91.3 832 14-848 13-986 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 4E-125 9E-130 1175.2 92.3 800 16-847 2-882 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 6E-125 1E-129 1180.5 90.5 814 22-844 43-938 (941)
12 KOG0204 Calcium transporting A 100.0 9E-124 2E-128 1062.4 52.3 812 22-843 102-1004(1034)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 4E-116 8E-121 1097.2 84.7 779 65-846 1-917 (917)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 1E-117 3E-122 1011.2 31.3 841 7-849 27-1009(1019)
15 TIGR01657 P-ATPase-V P-type AT 100.0 3E-112 6E-117 1075.1 77.1 751 34-801 137-1022(1054)
16 TIGR01652 ATPase-Plipid phosph 100.0 2E-102 4E-107 989.1 70.7 785 49-850 1-1049(1057)
17 PLN03190 aminophospholipid tra 100.0 3.9E-98 8E-103 939.5 71.8 784 47-857 85-1150(1178)
18 PRK14010 potassium-transportin 100.0 2.1E-96 4E-101 873.3 59.7 545 67-669 28-588 (673)
19 PRK01122 potassium-transportin 100.0 9.6E-93 2.1E-97 842.7 63.0 537 66-658 28-581 (679)
20 TIGR01497 kdpB K+-transporting 100.0 3.7E-88 8.1E-93 801.5 61.5 541 66-661 27-585 (675)
21 KOG0208 Cation transport ATPas 100.0 5.4E-87 1.2E-91 771.3 54.8 676 25-715 149-985 (1140)
22 KOG0206 P-type ATPase [General 100.0 3E-89 6.6E-94 829.8 30.4 788 45-853 28-1082(1151)
23 COG2217 ZntA Cation transport 100.0 3.3E-84 7.1E-89 768.9 58.4 502 98-663 175-678 (713)
24 PRK11033 zntA zinc/cadmium/mer 100.0 5.9E-80 1.3E-84 753.8 61.4 498 96-661 205-705 (741)
25 TIGR01494 ATPase_P-type ATPase 100.0 5.8E-78 1.2E-82 712.9 56.4 474 104-665 3-482 (499)
26 KOG0207 Cation transport ATPas 100.0 2.7E-79 5.8E-84 709.3 41.2 539 95-688 338-889 (951)
27 KOG0210 P-type ATPase [Inorgan 100.0 4.2E-78 9.1E-83 670.9 42.4 765 44-852 74-1045(1051)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 1.5E-75 3.2E-80 699.0 60.9 516 76-662 4-525 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.5E-76 1.2E-80 698.4 55.6 498 76-662 4-504 (536)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 7.4E-75 1.6E-79 691.1 59.8 506 96-678 53-560 (562)
31 PRK10671 copA copper exporting 100.0 8.5E-74 1.9E-78 712.8 62.3 521 97-681 285-810 (834)
32 KOG0209 P-type ATPase [Inorgan 100.0 5.8E-72 1.3E-76 632.5 49.6 572 21-611 148-833 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 2E-62 4.2E-67 533.9 33.6 520 68-643 29-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.9E-35 4.1E-40 315.5 25.2 222 102-323 1-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 4.5E-26 9.7E-31 239.8 12.4 211 327-604 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 1.2E-14 2.5E-19 133.8 10.8 116 482-626 20-138 (152)
37 PF00690 Cation_ATPase_N: Cati 99.4 1.4E-12 2.9E-17 111.7 7.4 67 18-84 1-69 (69)
38 KOG4383 Uncharacterized conser 99.3 1.5E-09 3.2E-14 123.2 32.1 210 480-689 814-1130(1354)
39 PF00689 Cation_ATPase_C: Cati 99.2 3.6E-10 7.8E-15 116.2 16.0 166 672-844 1-182 (182)
40 smart00831 Cation_ATPase_N Cat 99.1 3.2E-10 6.9E-15 95.6 7.1 60 29-88 2-63 (64)
41 TIGR02137 HSK-PSP phosphoserin 98.9 6.8E-09 1.5E-13 108.4 11.4 131 492-639 68-198 (203)
42 PRK11133 serB phosphoserine ph 98.9 4.1E-09 8.9E-14 117.4 9.8 131 492-636 181-315 (322)
43 PRK01158 phosphoglycolate phos 98.9 1.2E-08 2.5E-13 108.9 11.3 153 485-637 12-226 (230)
44 TIGR01487 SPP-like sucrose-pho 98.8 9.6E-09 2.1E-13 108.6 8.9 144 492-635 18-214 (215)
45 TIGR00338 serB phosphoserine p 98.8 1.3E-08 2.8E-13 107.8 9.7 129 492-635 85-218 (219)
46 PF13246 Hydrolase_like2: Puta 98.8 1.2E-08 2.7E-13 92.2 6.9 65 374-439 20-90 (91)
47 TIGR02726 phenyl_P_delta pheny 98.8 2.8E-08 6E-13 100.4 10.1 102 499-630 41-144 (169)
48 COG0561 Cof Predicted hydrolas 98.8 4.5E-08 9.7E-13 106.9 12.4 154 485-638 12-259 (264)
49 PRK10513 sugar phosphate phosp 98.8 3.1E-08 6.7E-13 108.4 11.1 53 585-637 213-265 (270)
50 TIGR01482 SPP-subfamily Sucros 98.7 6.6E-08 1.4E-12 102.7 11.3 145 492-636 15-221 (225)
51 PRK15126 thiamin pyrimidine py 98.7 1.9E-08 4.1E-13 110.3 7.2 65 573-637 189-259 (272)
52 TIGR01670 YrbI-phosphatas 3-de 98.7 5.6E-08 1.2E-12 97.2 9.6 101 500-628 36-136 (154)
53 PRK10976 putative hydrolase; P 98.7 9.1E-08 2E-12 104.5 12.2 53 585-637 207-261 (266)
54 COG0560 SerB Phosphoserine pho 98.6 1.6E-07 3.6E-12 98.6 9.9 118 491-623 76-198 (212)
55 PLN02887 hydrolase family prot 98.6 3.2E-07 7E-12 109.4 12.7 52 586-637 525-576 (580)
56 PF08282 Hydrolase_3: haloacid 98.6 1.4E-07 3.1E-12 101.2 8.2 146 491-636 14-254 (254)
57 TIGR01486 HAD-SF-IIB-MPGP mann 98.5 7.8E-07 1.7E-11 96.7 13.7 55 584-638 194-254 (256)
58 PRK10530 pyridoxal phosphate ( 98.5 4.7E-07 1E-11 99.1 12.1 53 585-637 216-268 (272)
59 PRK09484 3-deoxy-D-manno-octul 98.5 3.6E-07 7.9E-12 94.0 8.0 97 499-627 55-155 (183)
60 PRK13582 thrH phosphoserine ph 98.4 1.2E-06 2.6E-11 91.7 11.3 127 492-636 68-195 (205)
61 TIGR00099 Cof-subfamily Cof su 98.4 7.6E-07 1.7E-11 96.7 9.9 64 572-635 188-255 (256)
62 PRK03669 mannosyl-3-phosphogly 98.4 3E-06 6.5E-11 93.0 13.4 55 584-638 206-266 (271)
63 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 8.4E-07 1.8E-11 92.3 8.5 117 492-621 80-200 (201)
64 PRK08238 hypothetical protein; 98.4 0.00023 4.9E-09 83.8 29.5 100 492-617 72-172 (479)
65 TIGR03333 salvage_mtnX 2-hydro 98.3 3.7E-06 8E-11 88.9 10.7 111 491-610 69-182 (214)
66 COG1778 Low specificity phosph 98.3 1.8E-06 3.8E-11 83.3 6.8 98 499-628 42-143 (170)
67 PRK00192 mannosyl-3-phosphogly 98.2 9.8E-06 2.1E-10 89.0 13.5 66 572-637 190-267 (273)
68 PF12710 HAD: haloacid dehalog 98.2 1.2E-06 2.7E-11 90.3 5.8 92 495-601 92-192 (192)
69 KOG1615 Phosphoserine phosphat 98.2 5.3E-06 1.2E-10 82.6 7.7 101 493-610 89-199 (227)
70 PLN02954 phosphoserine phospha 98.1 2.4E-05 5.1E-10 83.1 11.3 131 492-634 84-221 (224)
71 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.4E-05 3E-10 82.2 8.2 113 491-608 71-186 (188)
72 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2.9E-05 6.2E-10 82.4 9.9 110 492-609 74-185 (219)
73 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.4E-05 2.9E-10 81.5 6.7 101 492-603 73-177 (177)
74 PRK13222 phosphoglycolate phos 97.9 7.6E-05 1.7E-09 79.2 11.8 127 491-638 92-223 (226)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 3.2E-05 6.9E-10 80.7 7.4 109 490-610 85-197 (202)
76 cd01427 HAD_like Haloacid deha 97.8 5.9E-05 1.3E-09 72.2 8.2 118 488-608 20-138 (139)
77 TIGR01485 SPP_plant-cyano sucr 97.7 8.6E-05 1.9E-09 80.3 8.7 147 491-637 20-244 (249)
78 COG0546 Gph Predicted phosphat 97.7 0.00021 4.6E-09 75.8 11.5 126 490-636 87-217 (220)
79 TIGR01454 AHBA_synth_RP 3-amin 97.7 0.00021 4.6E-09 74.8 10.9 124 492-636 75-203 (205)
80 TIGR02461 osmo_MPG_phos mannos 97.7 0.0002 4.3E-09 76.3 9.7 44 490-533 13-56 (225)
81 TIGR02463 MPGP_rel mannosyl-3- 97.5 0.00079 1.7E-08 71.3 11.8 38 495-532 19-56 (221)
82 PRK13223 phosphoglycolate phos 97.4 0.00075 1.6E-08 74.1 11.0 125 491-636 100-229 (272)
83 TIGR02471 sucr_syn_bact_C sucr 97.4 0.00016 3.5E-09 77.5 5.5 67 572-638 159-233 (236)
84 PLN02382 probable sucrose-phos 97.4 0.00061 1.3E-08 79.1 10.6 141 497-637 33-257 (413)
85 TIGR01449 PGP_bact 2-phosphogl 97.3 0.00085 1.8E-08 70.5 9.6 121 492-633 85-210 (213)
86 PRK13288 pyrophosphatase PpaX; 97.3 0.001 2.3E-08 70.0 10.3 124 492-636 82-210 (214)
87 PRK10187 trehalose-6-phosphate 97.2 0.00048 1E-08 75.3 5.5 131 492-626 36-232 (266)
88 PRK10826 2-deoxyglucose-6-phos 97.1 0.002 4.4E-08 68.3 9.8 115 491-624 91-209 (222)
89 TIGR03351 PhnX-like phosphonat 97.1 0.0029 6.4E-08 66.8 10.5 125 491-634 86-217 (220)
90 TIGR01544 HAD-SF-IE haloacid d 97.1 0.0082 1.8E-07 65.3 13.5 127 491-636 120-273 (277)
91 PRK13226 phosphoglycolate phos 97.0 0.0041 8.9E-08 66.4 10.4 122 492-634 95-222 (229)
92 PRK11590 hypothetical protein; 97.0 0.0038 8.2E-08 65.8 9.9 107 492-611 95-203 (211)
93 PRK14502 bifunctional mannosyl 96.9 0.0044 9.5E-08 74.6 11.0 48 485-532 425-473 (694)
94 TIGR01545 YfhB_g-proteo haloac 96.9 0.0038 8.1E-08 65.8 9.0 107 492-611 94-202 (210)
95 PRK12702 mannosyl-3-phosphogly 96.9 0.0066 1.4E-07 66.1 10.7 42 492-533 18-59 (302)
96 PRK13478 phosphonoacetaldehyde 96.8 0.011 2.4E-07 64.6 11.9 96 492-605 101-197 (267)
97 PLN03243 haloacid dehalogenase 96.7 0.0097 2.1E-07 64.8 10.9 116 492-626 109-226 (260)
98 TIGR01422 phosphonatase phosph 96.7 0.011 2.5E-07 63.9 11.5 98 492-607 99-197 (253)
99 PRK13225 phosphoglycolate phos 96.7 0.015 3.2E-07 63.9 12.3 121 492-636 142-267 (273)
100 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.003 6.5E-08 65.7 6.4 94 490-603 104-197 (197)
101 PLN02770 haloacid dehalogenase 96.5 0.018 3.9E-07 62.2 11.4 117 492-627 108-228 (248)
102 PRK06698 bifunctional 5'-methy 96.4 0.011 2.5E-07 69.8 9.8 123 492-638 330-455 (459)
103 PRK11587 putative phosphatase; 96.4 0.018 3.8E-07 61.0 9.9 115 492-626 83-199 (218)
104 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.01 2.2E-07 61.9 8.0 39 492-530 17-55 (204)
105 TIGR02253 CTE7 HAD superfamily 96.3 0.017 3.6E-07 61.0 9.2 100 492-610 94-195 (221)
106 COG4030 Uncharacterized protei 96.2 0.043 9.3E-07 56.5 10.8 142 492-637 83-262 (315)
107 PRK14501 putative bifunctional 96.1 0.036 7.8E-07 69.5 12.3 170 448-636 481-720 (726)
108 PHA02530 pseT polynucleotide k 96.1 0.016 3.4E-07 64.5 8.2 109 489-608 184-293 (300)
109 TIGR01428 HAD_type_II 2-haloal 96.1 0.02 4.4E-07 59.4 8.5 97 492-607 92-188 (198)
110 PRK11009 aphA acid phosphatase 96.1 0.015 3.1E-07 62.3 7.4 89 492-606 114-206 (237)
111 TIGR01672 AphA HAD superfamily 96.1 0.01 2.2E-07 63.5 6.2 89 492-606 114-206 (237)
112 PLN02779 haloacid dehalogenase 96.0 0.027 5.8E-07 62.3 9.6 118 492-626 144-264 (286)
113 PF05116 S6PP: Sucrose-6F-phos 96.0 0.018 4E-07 62.2 7.8 68 571-638 164-244 (247)
114 PF13419 HAD_2: Haloacid dehal 95.9 0.0098 2.1E-07 59.6 5.2 97 491-606 76-172 (176)
115 PRK08942 D,D-heptose 1,7-bisph 95.9 0.056 1.2E-06 55.4 10.5 127 492-636 29-176 (181)
116 TIGR01990 bPGM beta-phosphoglu 95.7 0.018 3.9E-07 58.8 6.2 94 492-606 87-180 (185)
117 TIGR01662 HAD-SF-IIIA HAD-supe 95.7 0.038 8.2E-07 53.4 7.8 92 491-605 24-125 (132)
118 PRK14988 GMP/IMP nucleotidase; 95.7 0.035 7.6E-07 59.1 8.2 102 492-612 93-196 (224)
119 TIGR01509 HAD-SF-IA-v3 haloaci 95.6 0.045 9.7E-07 55.6 8.6 94 492-605 85-178 (183)
120 TIGR02254 YjjG/YfnB HAD superf 95.6 0.043 9.3E-07 57.9 8.7 120 492-633 97-221 (224)
121 PRK06769 hypothetical protein; 95.5 0.04 8.6E-07 56.2 7.8 99 493-609 29-135 (173)
122 PLN02575 haloacid dehalogenase 95.5 0.074 1.6E-06 60.7 10.3 115 492-625 216-332 (381)
123 COG4359 Uncharacterized conser 95.4 0.022 4.8E-07 56.8 5.1 111 492-608 73-183 (220)
124 TIGR02009 PGMB-YQAB-SF beta-ph 95.3 0.034 7.5E-07 56.8 6.4 95 491-606 87-181 (185)
125 smart00775 LNS2 LNS2 domain. T 95.2 0.098 2.1E-06 52.4 9.3 104 490-606 25-141 (157)
126 PLN02940 riboflavin kinase 95.2 0.069 1.5E-06 61.6 9.2 114 492-624 93-210 (382)
127 PTZ00174 phosphomannomutase; P 95.2 0.013 2.9E-07 63.2 3.1 54 571-624 187-245 (247)
128 PRK09449 dUMP phosphatase; Pro 94.9 0.11 2.5E-06 54.9 9.3 123 492-636 95-222 (224)
129 TIGR01685 MDP-1 magnesium-depe 94.5 0.089 1.9E-06 53.6 6.8 108 486-609 39-155 (174)
130 TIGR01656 Histidinol-ppas hist 94.5 0.091 2E-06 51.9 6.8 100 492-607 27-141 (147)
131 TIGR00213 GmhB_yaeD D,D-heptos 94.3 0.21 4.5E-06 51.0 9.2 121 493-625 27-169 (176)
132 TIGR02252 DREG-2 REG-2-like, H 94.3 0.12 2.7E-06 53.6 7.6 95 492-606 105-200 (203)
133 TIGR01668 YqeG_hyp_ppase HAD s 94.1 0.14 3E-06 52.1 7.2 110 454-606 20-131 (170)
134 TIGR01549 HAD-SF-IA-v1 haloaci 94.0 0.082 1.8E-06 52.3 5.3 91 492-604 64-154 (154)
135 TIGR01261 hisB_Nterm histidino 93.5 0.16 3.4E-06 51.2 6.4 101 492-609 29-145 (161)
136 PLN02811 hydrolase 92.9 0.25 5.5E-06 52.2 7.2 101 492-609 78-182 (220)
137 smart00577 CPDc catalytic doma 92.7 0.16 3.4E-06 50.3 4.9 98 490-609 43-140 (148)
138 TIGR01533 lipo_e_P4 5'-nucleot 92.5 0.47 1E-05 51.7 8.5 87 490-601 116-205 (266)
139 PLN02919 haloacid dehalogenase 92.4 0.72 1.6E-05 60.1 11.6 127 492-636 161-291 (1057)
140 PF06888 Put_Phosphatase: Puta 92.4 0.41 9E-06 51.0 7.8 103 492-601 71-187 (234)
141 COG2179 Predicted hydrolase of 92.3 0.65 1.4E-05 46.2 8.3 110 450-605 19-132 (175)
142 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.3 1.1 2.4E-05 48.2 11.2 94 485-604 17-115 (242)
143 PRK05446 imidazole glycerol-ph 92.1 0.35 7.7E-06 54.8 7.4 101 491-608 29-145 (354)
144 TIGR01691 enolase-ppase 2,3-di 91.5 0.46 9.9E-06 50.4 6.9 99 490-609 93-194 (220)
145 TIGR01681 HAD-SF-IIIC HAD-supe 91.2 0.8 1.7E-05 44.1 7.7 93 492-602 29-126 (128)
146 TIGR00685 T6PP trehalose-phosp 91.0 0.24 5.3E-06 53.3 4.4 63 570-636 165-239 (244)
147 TIGR01664 DNA-3'-Pase DNA 3'-p 90.8 0.76 1.6E-05 46.5 7.5 93 493-606 43-157 (166)
148 TIGR02247 HAD-1A3-hyp Epoxide 90.7 0.29 6.3E-06 51.2 4.6 98 491-607 93-192 (211)
149 TIGR01675 plant-AP plant acid 90.6 0.5 1.1E-05 50.2 6.1 87 491-597 119-209 (229)
150 COG3769 Predicted hydrolase (H 90.1 1.7 3.7E-05 45.1 9.1 37 496-532 27-63 (274)
151 PRK09456 ?-D-glucose-1-phospha 89.3 1 2.2E-05 46.7 7.3 97 492-607 84-181 (199)
152 PRK10563 6-phosphogluconate ph 89.1 0.9 1.9E-05 47.9 6.8 97 492-609 88-184 (221)
153 PLN02205 alpha,alpha-trehalose 89.0 1.7 3.6E-05 55.3 10.1 37 492-528 616-653 (854)
154 KOG3120 Predicted haloacid deh 87.8 1.9 4.2E-05 44.8 7.7 110 492-609 84-208 (256)
155 PLN02580 trehalose-phosphatase 86.7 0.87 1.9E-05 52.1 5.0 61 572-636 301-373 (384)
156 PLN02645 phosphoglycolate phos 85.6 2 4.3E-05 48.2 7.2 48 485-532 37-87 (311)
157 TIGR01993 Pyr-5-nucltdase pyri 85.2 1.3 2.8E-05 45.2 5.2 98 492-607 84-181 (184)
158 PRK10725 fructose-1-P/6-phosph 85.1 2.1 4.4E-05 43.8 6.6 92 494-606 90-181 (188)
159 PF09419 PGP_phosphatase: Mito 85.0 2.4 5.2E-05 42.8 6.7 107 454-604 36-157 (168)
160 PLN03017 trehalose-phosphatase 83.6 13 0.00029 42.3 12.5 34 492-526 133-166 (366)
161 TIGR01686 FkbH FkbH-like domai 83.5 2.3 5.1E-05 47.8 6.6 95 492-610 31-129 (320)
162 PHA02597 30.2 hypothetical pro 80.0 4.4 9.5E-05 41.8 6.7 94 492-608 74-171 (197)
163 PF13344 Hydrolase_6: Haloacid 78.3 1.3 2.8E-05 40.8 1.9 48 485-532 7-57 (101)
164 TIGR01517 ATPase-IIB_Ca plasma 74.6 50 0.0011 43.0 15.4 20 155-174 174-193 (941)
165 PF08235 LNS2: LNS2 (Lipin/Ned 73.1 17 0.00038 36.3 8.3 103 491-606 26-141 (157)
166 COG0637 Predicted phosphatase/ 72.3 10 0.00023 40.1 7.2 100 491-609 85-184 (221)
167 PF03767 Acid_phosphat_B: HAD 71.2 5.5 0.00012 42.6 4.7 90 491-599 114-207 (229)
168 KOG3040 Predicted sugar phosph 70.7 8.5 0.00018 39.8 5.6 48 482-529 13-60 (262)
169 PLN02177 glycerol-3-phosphate 70.2 15 0.00033 43.8 8.6 98 493-611 111-215 (497)
170 PRK10748 flavin mononucleotide 69.4 9.6 0.00021 40.8 6.2 93 492-609 113-206 (238)
171 TIGR01680 Veg_Stor_Prot vegeta 68.9 21 0.00046 38.9 8.5 31 490-520 143-173 (275)
172 PRK10444 UMP phosphatase; Prov 68.9 4.9 0.00011 43.4 3.8 45 485-529 10-54 (248)
173 COG1011 Predicted hydrolase (H 68.4 19 0.0004 37.8 8.1 97 492-610 99-199 (229)
174 COG0474 MgtA Cation transport 67.5 1.2E+02 0.0026 39.5 16.4 272 18-307 42-332 (917)
175 TIGR01493 HAD-SF-IA-v2 Haloaci 67.4 10 0.00022 38.1 5.6 86 492-603 90-175 (175)
176 PLN02423 phosphomannomutase 67.3 7.4 0.00016 42.0 4.8 42 572-614 189-235 (245)
177 TIGR01458 HAD-SF-IIA-hyp3 HAD- 66.9 6.9 0.00015 42.5 4.5 48 485-532 10-64 (257)
178 TIGR01457 HAD-SF-IIA-hyp2 HAD- 66.2 10 0.00022 40.9 5.7 48 485-532 10-60 (249)
179 TIGR01684 viral_ppase viral ph 65.8 9.3 0.0002 42.0 5.1 41 493-533 146-187 (301)
180 TIGR01452 PGP_euk phosphoglyco 64.4 27 0.00058 38.4 8.6 48 485-532 11-61 (279)
181 PHA03398 viral phosphatase sup 63.3 11 0.00024 41.5 5.1 41 493-533 148-189 (303)
182 COG0241 HisB Histidinol phosph 63.1 19 0.0004 37.0 6.4 98 493-609 32-146 (181)
183 cd04728 ThiG Thiazole synthase 62.6 2.2E+02 0.0048 30.6 14.4 53 476-528 88-143 (248)
184 TIGR01647 ATPase-IIIA_H plasma 60.2 1.2E+02 0.0025 38.6 14.1 191 106-306 61-261 (755)
185 TIGR01458 HAD-SF-IIA-hyp3 HAD- 58.6 21 0.00045 38.8 6.3 117 495-634 123-252 (257)
186 TIGR02244 HAD-IG-Ncltidse HAD 58.3 34 0.00074 38.8 8.1 105 494-604 186-316 (343)
187 PF05975 EcsB: Bacterial ABC t 57.7 3.5E+02 0.0076 31.2 17.1 22 643-664 13-34 (386)
188 PRK14194 bifunctional 5,10-met 56.8 45 0.00098 37.1 8.5 140 489-628 12-211 (301)
189 COG3700 AphA Acid phosphatase 54.3 16 0.00035 36.8 4.0 90 493-609 115-210 (237)
190 TIGR01663 PNK-3'Pase polynucle 53.4 34 0.00074 41.1 7.4 40 493-532 198-249 (526)
191 PF05822 UMPH-1: Pyrimidine 5' 52.7 62 0.0013 34.9 8.4 134 491-636 89-241 (246)
192 PRK00208 thiG thiazole synthas 51.9 3.4E+02 0.0074 29.3 15.2 54 475-528 87-143 (250)
193 TIGR01689 EcbF-BcbF capsule bi 50.9 14 0.00031 35.5 3.0 32 491-522 23-54 (126)
194 PTZ00174 phosphomannomutase; P 47.4 23 0.00049 38.2 4.3 35 492-526 22-56 (247)
195 TIGR01524 ATPase-IIIB_Mg magne 47.2 5.4E+02 0.012 33.3 17.2 26 276-301 289-314 (867)
196 TIGR02251 HIF-SF_euk Dullard-l 46.8 20 0.00043 36.0 3.5 44 488-532 38-81 (162)
197 PF10777 YlaC: Inner membrane 46.8 36 0.00077 33.3 4.9 50 784-840 33-82 (155)
198 PF13380 CoA_binding_2: CoA bi 46.4 19 0.0004 34.1 3.1 39 493-531 64-103 (116)
199 PTZ00445 p36-lilke protein; Pr 46.3 34 0.00075 35.9 5.1 63 444-519 28-102 (219)
200 PRK15122 magnesium-transportin 44.1 5.5E+02 0.012 33.4 16.7 28 275-302 321-348 (903)
201 COG0647 NagD Predicted sugar p 41.6 28 0.00062 38.0 3.9 46 484-529 16-61 (269)
202 PRK14188 bifunctional 5,10-met 41.4 73 0.0016 35.4 7.1 138 489-626 10-208 (296)
203 TIGR01657 P-ATPase-V P-type AT 40.7 1E+03 0.022 31.6 20.1 214 103-345 196-450 (1054)
204 TIGR01494 ATPase_P-type ATPase 40.4 1.5E+02 0.0032 35.5 10.3 148 140-305 53-212 (499)
205 TIGR01106 ATPase-IIC_X-K sodiu 39.7 4.2E+02 0.009 34.9 14.8 70 114-193 118-188 (997)
206 PRK11840 bifunctional sulfur c 39.7 4.2E+02 0.009 29.9 12.5 53 476-528 162-217 (326)
207 PRK14179 bifunctional 5,10-met 39.3 1.3E+02 0.0028 33.2 8.6 138 489-626 10-208 (284)
208 TIGR01522 ATPase-IIA2_Ca golgi 38.6 5.1E+02 0.011 33.6 15.2 20 142-161 138-157 (884)
209 PRK11507 ribosome-associated p 37.1 38 0.00083 29.0 3.2 26 137-162 38-63 (70)
210 COG0279 GmhA Phosphoheptose is 35.7 89 0.0019 31.5 5.9 58 439-520 91-148 (176)
211 PF12368 DUF3650: Protein of u 35.0 30 0.00066 24.0 1.8 15 34-48 13-27 (28)
212 PF06570 DUF1129: Protein of u 34.9 5.4E+02 0.012 26.8 13.4 7 785-791 142-148 (206)
213 PRK14184 bifunctional 5,10-met 34.4 1.7E+02 0.0038 32.3 8.6 138 489-626 9-211 (286)
214 TIGR01459 HAD-SF-IIA-hyp4 HAD- 34.4 39 0.00085 36.1 3.7 92 494-607 140-237 (242)
215 TIGR00262 trpA tryptophan synt 34.1 1.5E+02 0.0032 32.3 8.0 39 491-529 123-163 (256)
216 PF00389 2-Hacid_dh: D-isomer 34.0 3.6E+02 0.0079 25.6 10.1 36 574-610 52-89 (133)
217 CHL00200 trpA tryptophan synth 31.5 2E+02 0.0042 31.5 8.4 31 570-600 187-217 (263)
218 TIGR01456 CECR5 HAD-superfamil 31.0 1.6E+02 0.0035 33.1 8.0 49 484-532 8-64 (321)
219 PF06738 DUF1212: Protein of u 30.9 2.6E+02 0.0057 28.6 9.0 50 12-66 58-108 (193)
220 PRK14174 bifunctional 5,10-met 30.4 2.2E+02 0.0048 31.7 8.6 138 489-626 9-213 (295)
221 PF13275 S4_2: S4 domain; PDB: 30.1 26 0.00056 29.6 1.1 23 138-160 35-57 (65)
222 COG5547 Small integral membran 29.4 2.2E+02 0.0047 23.4 5.9 48 65-120 3-52 (62)
223 PF12689 Acid_PPase: Acid Phos 29.3 94 0.002 31.5 5.1 40 493-532 46-86 (169)
224 PF01455 HupF_HypC: HupF/HypC 29.2 1.2E+02 0.0027 25.8 5.0 32 133-164 16-50 (68)
225 PRK14170 bifunctional 5,10-met 28.4 1.2E+02 0.0025 33.6 6.0 138 489-626 10-207 (284)
226 PRK10517 magnesium-transportin 28.4 1.4E+03 0.031 29.6 17.6 118 65-194 93-213 (902)
227 PF00122 E1-E2_ATPase: E1-E2 A 28.4 1.6E+02 0.0035 30.9 7.2 61 106-175 2-62 (230)
228 PF12710 HAD: haloacid dehalog 28.2 24 0.00053 35.7 0.7 14 330-343 1-14 (192)
229 PRK14169 bifunctional 5,10-met 28.2 1.2E+02 0.0026 33.5 6.1 138 489-626 9-206 (282)
230 PRK01122 potassium-transportin 28.2 5.4E+02 0.012 32.2 12.4 82 98-188 63-147 (679)
231 PRK14175 bifunctional 5,10-met 28.1 1.1E+02 0.0024 33.8 5.8 45 489-533 11-64 (286)
232 PF03120 DNA_ligase_OB: NAD-de 27.5 33 0.00072 30.4 1.3 23 147-169 45-68 (82)
233 PF14336 DUF4392: Domain of un 27.4 84 0.0018 34.9 4.8 37 495-531 63-100 (291)
234 PF03419 Peptidase_U4: Sporula 25.9 7.4E+02 0.016 27.3 12.1 20 829-848 132-151 (293)
235 TIGR02250 FCP1_euk FCP1-like p 25.3 1.1E+02 0.0024 30.5 4.8 43 490-533 56-98 (156)
236 PLN03190 aminophospholipid tra 25.3 4.7E+02 0.01 35.1 11.7 67 95-161 138-211 (1178)
237 PRK14182 bifunctional 5,10-met 24.7 1.6E+02 0.0036 32.4 6.3 138 489-626 9-207 (282)
238 PRK14191 bifunctional 5,10-met 24.6 1.5E+02 0.0032 32.8 6.0 138 489-626 9-207 (285)
239 PRK14178 bifunctional 5,10-met 24.5 3.2E+02 0.007 30.1 8.5 69 558-626 124-202 (279)
240 PRK14167 bifunctional 5,10-met 24.1 1.3E+02 0.0027 33.6 5.3 138 489-626 10-211 (297)
241 PF06506 PrpR_N: Propionate ca 24.1 1.9E+02 0.0041 29.3 6.4 67 564-648 105-172 (176)
242 PF13242 Hydrolase_like: HAD-h 23.5 1.1E+02 0.0023 26.1 3.8 52 574-625 11-70 (75)
243 PF15584 Imm44: Immunity prote 23.1 38 0.00083 30.4 0.9 20 154-173 13-32 (94)
244 PRK04017 hypothetical protein; 23.1 1.9E+02 0.004 28.2 5.6 69 574-650 10-89 (132)
245 PRK14190 bifunctional 5,10-met 22.6 1.7E+02 0.0037 32.3 6.0 138 489-626 11-208 (284)
246 PRK14189 bifunctional 5,10-met 21.7 1.6E+02 0.0035 32.5 5.5 139 489-627 11-209 (285)
247 PRK09479 glpX fructose 1,6-bis 21.6 1.8E+02 0.0038 32.4 5.7 38 487-526 161-198 (319)
248 TIGR01460 HAD-SF-IIA Haloacid 21.5 96 0.0021 33.1 3.8 47 485-531 7-57 (236)
249 PLN02591 tryptophan synthase 21.5 2.9E+02 0.0063 29.9 7.4 33 570-602 174-209 (250)
250 cd05017 SIS_PGI_PMI_1 The memb 21.1 1.3E+02 0.0028 28.2 4.1 36 494-531 56-91 (119)
251 PF02358 Trehalose_PPase: Treh 20.9 85 0.0018 33.4 3.2 56 572-627 165-234 (235)
252 PRK14166 bifunctional 5,10-met 20.7 2.1E+02 0.0046 31.6 6.2 138 489-626 9-207 (282)
253 PRK13125 trpA tryptophan synth 20.6 4E+02 0.0086 28.6 8.3 40 493-532 86-131 (244)
254 cd02067 B12-binding B12 bindin 20.3 93 0.002 29.1 3.0 80 452-532 21-104 (119)
255 PRK14186 bifunctional 5,10-met 20.3 1.5E+02 0.0032 33.1 4.9 138 489-626 10-208 (297)
256 PRK00652 lpxK tetraacyldisacch 20.3 1.8E+02 0.0039 32.9 5.7 57 575-631 70-154 (325)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-200 Score=1635.16 Aligned_cols=942 Identities=88% Similarity=1.337 Sum_probs=925.2
Q ss_pred CCccccchhhhcccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHH
Q 002208 1 MGDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAA 80 (953)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ 80 (953)
|.++..+++++++|.+|++..|.++|+++|.|+..|||++|+++|+++||+|+++++|++.+++|+.+||||++|+|+++
T Consensus 1 m~e~l~s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaA 80 (942)
T KOG0205|consen 1 MIEELDSLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAA 80 (942)
T ss_pred CcccccchhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHH
Confidence 45666668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEE
Q 002208 81 AVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISI 160 (953)
Q Consensus 81 ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l 160 (953)
|++++.+.+++|++++|.|+++|++++++|++++|+||++++++.++||+.++++++|+|||+|.++++++||||||+.+
T Consensus 81 AimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsi 160 (942)
T KOG0205|consen 81 AIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSI 160 (942)
T ss_pred HHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccCCCCcH
Q 002208 161 KLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240 (953)
Q Consensus 161 ~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~~~~~l 240 (953)
+.||+||||+||++|+.++||||+|||||.||+|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+||
T Consensus 161 k~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHF 240 (942)
T KOG0205|consen 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240 (942)
T ss_pred ccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhH
Q 002208 241 QKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (953)
Q Consensus 241 q~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~ 320 (953)
|++++.|+++|++++++++++.++++|+.+++.++..+.+.++++++.||+|||.++++++++|+.||+++|+++|+++|
T Consensus 241 qkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtA 320 (942)
T KOG0205|consen 241 QKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (942)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEE
Q 002208 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVH 400 (953)
Q Consensus 321 iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~ 400 (953)
+|+|+++|++|+|||||||.|+++|++..++.+.+|.++|++++.|+++++.+++|++|.|+++++.||++++.+|++++
T Consensus 321 IEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevh 400 (942)
T KOG0205|consen 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVH 400 (942)
T ss_pred HHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEe
Confidence 99999999999999999999999999988888999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCC
Q 002208 401 FFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGP 480 (953)
Q Consensus 401 ~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~ 480 (953)
++||||..||.+.+|.++||++++++||||+.|+++|+.++++++++++.+++||++|+|.|+||++..++..++..+.+
T Consensus 401 F~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~p 480 (942)
T KOG0205|consen 401 FLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGP 480 (942)
T ss_pred eccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHH
Q 002208 481 WQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560 (953)
Q Consensus 481 l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 560 (953)
|+|+|+..+.||||+|+.++|++....|++|+|+|||+...++++++++|+.+|++|+..+.|...++.+...+++++++
T Consensus 481 w~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie 560 (942)
T KOG0205|consen 481 WEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIE 560 (942)
T ss_pred cccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhH
Q 002208 561 KADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSR 640 (953)
Q Consensus 561 ~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR 640 (953)
+.+.||.++|+||+++|+.||++||+|+|+|||+||+||||+||+|||+.+++|+|+.+||+||++++++.|+.++..||
T Consensus 561 ~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSr 640 (942)
T KOG0205|consen 561 KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (942)
T ss_pred hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhhhchhccccCCCCCCCCCCccchHHHHHHHHHH
Q 002208 641 AIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVL 720 (953)
Q Consensus 641 ~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~ 720 (953)
.+|+||++|.+|+++.++.+++++++..+.|.|.|+|++++++++++|++.|++++|+++|+|.|++|+++++|..++++
T Consensus 641 aIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVl 720 (942)
T KOG0205|consen 641 AIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVL 720 (942)
T ss_pred HHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHH
Q 002208 721 GGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQL 800 (953)
Q Consensus 721 G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~ 800 (953)
|.|+++++..+||..+.+.||+..||+.....+..+.....|+++++.+|+++|++|+++|+|.++|+++++++++.+++
T Consensus 721 gtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aql 800 (942)
T KOG0205|consen 721 GTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQL 800 (942)
T ss_pred hhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999988877888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchhHHHhhhccccccccccCChhhHHHHHH
Q 002208 801 VATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWA 880 (953)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (953)
+++++++|++|.|.+.++++|.|..++|++++..+++.++.|+..||.+++.+|++.++++++++.||+|++++|++||+
T Consensus 801 iatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~ 880 (942)
T KOG0205|consen 801 IATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWA 880 (942)
T ss_pred HHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccCCCCCcCCCCCCCccchhhhHHHHHHHHHHHHHHHhhhhccccchhhhHhhcCCChhhhhccccC
Q 002208 881 LAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 953 (953)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (953)
.+||++||.++++ .+|+++++||++||+|++||||+|+++||++|++|+||+|+|++ |||||
T Consensus 881 ~~qrt~~~lq~~~----------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 881 LAQRTLHGLQPPE----------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred HhhhhhcccCCCc----------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999999884 28899999999999999999999999999999999999999999 88997
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-143 Score=1220.76 Aligned_cols=823 Identities=28% Similarity=0.419 Sum_probs=683.1
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccc-ccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC
Q 002208 16 VDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEK-KESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGK 93 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~ 93 (953)
.+.|..+.+|++..|.++ ++|||++|+.+|+++||+|+++.. ..+.|+++++||.||+..+|+++|++|+++.
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~----- 76 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA----- 76 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-----
Confidence 356778999999999999 679999999999999999999855 5889999999999999999999999999987
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEE
Q 002208 94 PPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLL 173 (953)
Q Consensus 94 ~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll 173 (953)
.|.+++.|.+++++|++++++||||++|++++|+++.++.++|+|+|+.+.++++||||||||.|+-||+||||.||+
T Consensus 77 --~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~ 154 (972)
T KOG0202|consen 77 --DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLI 154 (972)
T ss_pred --hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEE
Confidence 888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeEEeecCCCCCCeeEecCC--------------CCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCC
Q 002208 174 EGDPLKVDQSALTGESLPVTKNP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVG 238 (953)
Q Consensus 174 ~g~~l~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~ 238 (953)
+..++.||||+|||||.||.|.. .|++|+||.|..|.+.|+|+.||.+|++|++.+.+++.+ .++
T Consensus 155 e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kT 234 (972)
T KOG0202|consen 155 EAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKT 234 (972)
T ss_pred eeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCC
Confidence 99889999999999999999954 258999999999999999999999999999999998874 699
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc---c-c---cchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHh
Q 002208 239 HFQKVLTAIGNFCICSIAVGMLVEIIV--MYPI---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (953)
Q Consensus 239 ~lq~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~ 309 (953)
|+|+.++.+++.+.-.+.++++..++. .|+. . + ..+.+.|..++++.+++||+|||++++++++.|.+||+
T Consensus 235 PLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMa 314 (972)
T KOG0202|consen 235 PLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMA 314 (972)
T ss_pred cHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHH
Confidence 999999999987652222222222222 2221 1 2 34556788889999999999999999999999999999
Q ss_pred hCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehh-----------ccCC------------------ChH
Q 002208 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-----------AKGV------------------EKD 360 (953)
Q Consensus 310 ~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~-----------~~~~------------------~~~ 360 (953)
|++++||++.++|+||.+++||||||||||+|+|++.+.++... ..++ ..+
T Consensus 315 kknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~ 394 (972)
T KOG0202|consen 315 KKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDND 394 (972)
T ss_pred hhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccH
Confidence 99999999999999999999999999999999999999775211 0011 111
Q ss_pred ---HHHHHHHHhccC------c-----CCChHHHHHHHhcC-----Chhh--------------hhcCcceEEeecCCCC
Q 002208 361 ---HVMLLAARASRT------E-----NQDAIDAAIVGMLA-----DPKE--------------ARAGIREVHFFPFNPV 407 (953)
Q Consensus 361 ---~~l~~a~~~~~~------~-----~~~~~~~ai~~~~~-----~~~~--------------~~~~~~~l~~~pF~s~ 407 (953)
+++..++.|+.. . .++|+|.|+...+. +... ....++....+||+++
T Consensus 395 ~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 395 LLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 233334444321 1 24688888876542 1110 1122345589999999
Q ss_pred CceEEEEEEcCCCc--EEEEEeCcHHHHHHHhhc------------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCC-C
Q 002208 408 DKRTALTYIDSDGH--WHRASKGAPEQILALCNA------------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPE-R 472 (953)
Q Consensus 408 ~kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~-~ 472 (953)
+|+|++.+.++.|+ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|||+||+|+++.+. .
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 99999999876664 789999999999999953 34568889999999999999999999997763 1
Q ss_pred ----------CCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCcc
Q 002208 473 ----------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSAS 540 (953)
Q Consensus 473 ----------~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~ 540 (953)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||++||+++|+..+.. ....
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 2456789999999999999999999999999999999999999999999999999999976432 4456
Q ss_pred ccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhc
Q 002208 541 LLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGA 619 (953)
Q Consensus 541 l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~a 619 (953)
++|.+.+ .++++++++...+..+|+|++|+||.+||+.||++|++|+|||||+||+||||+|||||||| +|||+||+|
T Consensus 635 ~TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 635 LTGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEA 713 (972)
T ss_pred cchhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhh
Confidence 7777666 78999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCccHHHHHHHHHhhhhc-hhccccC
Q 002208 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF-IALIWKFDFSPFMVLIIAILNDGT-IMTISKD 697 (953)
Q Consensus 620 aDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d 697 (953)
||+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+.++++ ..+..+.|+.|+|+||+|+++|++ +++++++
T Consensus 714 sDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~e 793 (972)
T KOG0202|consen 714 SDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFE 793 (972)
T ss_pred hhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCC
Confidence 99999999999999999999999999999999999999987776666 456689999999999999999998 5999999
Q ss_pred CCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCcccc----------CC------CH
Q 002208 698 RVKPS---PLPDSWK----LKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAI----------RD------SE 754 (953)
Q Consensus 698 ~~~~~---~~p~~~~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~------~~ 754 (953)
++++. ++|++++ ...++...+.+|+|+.+.++..|++.+... ......+.. .. ..
T Consensus 794 p~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~ 871 (972)
T KOG0202|consen 794 PVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFED 871 (972)
T ss_pred CCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhcc
Confidence 98875 3444433 345566667779999998886665443210 110000000 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCcccCh---hHHHHHHHHHHHHHHHHHHHhhc--ccccccccchHhHHHHHHH
Q 002208 755 HEMMAALYLQVSIVSQALIFVTRSRSWSYLERP---GLLLVTAFVIAQLVATLIAVYAN--WGFARIKGVGWGWAGVIWL 829 (953)
Q Consensus 755 ~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 829 (953)
....|+.|..+++...++.++.|+...+.+..| |.|++.++.++++...++ +|.+ -..+++.+++|.-|++++.
T Consensus 872 ~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i-lYvp~l~~iFq~~~l~~~ew~~vl~ 950 (972)
T KOG0202|consen 872 MCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV-LYVPPLQRIFQTEPLSLAEWLLVLA 950 (972)
T ss_pred cccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheE-EEechhhhhheecCCcHHHHHHHHH
Confidence 122377788889999999999999886654432 448888888877665444 6654 1234677888877777789
Q ss_pred HHHHHHHHHHHHHHHhHHhc
Q 002208 830 YSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 830 ~~~~~~~~~~~~K~~~r~~~ 849 (953)
++..+++++|++|++.|++.
T Consensus 951 ~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 951 ISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HhhhhhhHHHHHHHHHHhcc
Confidence 99999999999999998765
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=9.7e-134 Score=1230.89 Aligned_cols=753 Identities=60% Similarity=0.957 Sum_probs=677.1
Q ss_pred CCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002208 36 GLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISF 115 (953)
Q Consensus 36 GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~ 115 (953)
|||++||++|+++||+|++++++++.|+.|+++|++|++|+|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999976 89999999999999999999
Q ss_pred HHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecC
Q 002208 116 IEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKN 195 (953)
Q Consensus 116 ~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~ 195 (953)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.||.|+
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 002208 196 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKY 274 (953)
Q Consensus 196 ~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 274 (953)
+||.+|+||.|.+|++.++|++||.+|++||+++++++++ .++++|+.+++++.+++..+++.+++.+++++...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998875 678999999999988765554434443333333256788
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhc
Q 002208 275 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFA 354 (953)
Q Consensus 275 ~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 354 (953)
.+++..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+... ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998763 22
Q ss_pred cCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEEEcCC-CcEEEEEeCcHHHH
Q 002208 355 KGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSD-GHWHRASKGAPEQI 433 (953)
Q Consensus 355 ~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~i 433 (953)
.+.++++++.+++.++....+||+|.|+++++.+....+..++.++.+||++.+|+|++++.+++ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23667788888887776666799999999987665545567888999999999999999987654 77788999999999
Q ss_pred HHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEE
Q 002208 434 LALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 513 (953)
Q Consensus 434 l~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~m 513 (953)
+++|++..+.++++++.+++++++|+|++++|+++ .|++|+|+|+++|+||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888999999999999999999983 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCC
Q 002208 514 ITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDG 593 (953)
Q Consensus 514 iTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG 593 (953)
+|||++.||.++|+++||..+......+......+.++++++++.+++.++|||++|+||+++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976544333343333445778889999999999999999999999999999999999999999
Q ss_pred ccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 002208 594 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKF 673 (953)
Q Consensus 594 ~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~ 673 (953)
+||+|||++|||||||++|+|+||++||+||++|+|++|+.++++||++|+||++|+.|.++.|+..++.+++..+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877777767778
Q ss_pred CccHHHHHHHHHhhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCC
Q 002208 674 DFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDS 753 (953)
Q Consensus 674 ~~~~~~il~i~l~~~~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 753 (953)
+++|+|++|+++++|++.+++++|+++|+++|++|...+++..+++.|++.++.++++||+.+...++...++ ....
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cccc
Confidence 8999999999999999899999999999999999999999999999999999999988877764222211111 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHh
Q 002208 754 EHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVY 808 (953)
Q Consensus 754 ~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 808 (953)
..+.+|++|+.+++.+++++|+.|+++.+|.++|++++++++++.++++++++.|
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~ 755 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAVY 755 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhhC
Confidence 4578899999999999999999999999999999999999999999888877643
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.7e-132 Score=1245.96 Aligned_cols=821 Identities=26% Similarity=0.394 Sum_probs=673.3
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 002208 15 TVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANGEG 92 (953)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~ 92 (953)
--|||..+.+|+++.|+++ .+|||++||++|+++||+|++++++ .++|+.|++||++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3589999999999999998 5799999999999999999999875 678999999999999999999999999986
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEE
Q 002208 93 KPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARL 172 (953)
Q Consensus 93 ~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 172 (953)
+|.++++|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||||
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEeecCCCCCCeeEecCCC---------------CcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC--
Q 002208 173 LEGDPLKVDQSALTGESLPVTKNPG---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 235 (953)
Q Consensus 173 l~g~~l~Vdes~LTGEs~pv~K~~g---------------~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-- 235 (953)
++++++.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|++||+++++.+..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998999999999999999999742 57899999999999999999999999999999886431
Q ss_pred ----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Q 002208 236 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNL 281 (953)
Q Consensus 236 ----------------------------------~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (953)
.++|+|+.++++++++.++.++.+++.+++.+ . ..+...+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHHH
Confidence 13899999999998754433332222222111 1 1124567778
Q ss_pred HHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh---h-----
Q 002208 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV---F----- 353 (953)
Q Consensus 282 l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~----- 353 (953)
++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+.+... +
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred ccCC---------------------------------------C---------hHHHHHHHHHhccC------------c
Q 002208 354 AKGV---------------------------------------E---------KDHVMLLAARASRT------------E 373 (953)
Q Consensus 354 ~~~~---------------------------------------~---------~~~~l~~a~~~~~~------------~ 373 (953)
..++ + ...++..++.|+.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 0000 0 01244445555421 1
Q ss_pred CCChHHHHHHHhcCCh----------hhh-------------------hcCcceEEeecCCCCCceEEEEEEcCCC-cEE
Q 002208 374 NQDAIDAAIVGMLADP----------KEA-------------------RAGIREVHFFPFNPVDKRTALTYIDSDG-HWH 423 (953)
Q Consensus 374 ~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~~ 423 (953)
.+||+|.|++.++... .+. ...|++++.+||||++|||+++++++++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 2599999998875311 011 2347889999999999999999987655 478
Q ss_pred EEEeCcHHHHHHHhhc------------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCC------------CCCCCC
Q 002208 424 RASKGAPEQILALCNA------------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERT------------KESPGG 479 (953)
Q Consensus 424 ~~~KGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~------------~~~~e~ 479 (953)
+++|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||++++.+ .+..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999963 2344677888999999999999999999886432 234688
Q ss_pred CcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--------CCccccCcccccccC
Q 002208 480 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSASLLGQDKDASIA 551 (953)
Q Consensus 480 ~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--------~~~~l~~~~~~~~~~ 551 (953)
+|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.++|+++||..+.. ...+++|.+.+ .++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-ALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hcC
Confidence 999999999999999999999999999999999999999999999999999974310 12455565544 677
Q ss_pred chhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCch
Q 002208 552 ALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 552 ~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~ 630 (953)
++++++++++..||||++|+||.++|+.+|++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|+
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 88899999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHhhhhc-hhccccCCCCCC-
Q 002208 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS- 702 (953)
Q Consensus 631 ~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~------~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~- 702 (953)
+|+.++.+||++|+||++++.|.+++|+..++.++++.++. ++||+|+|++|+|+++|++ ++++++|++++.
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~ 872 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhH
Confidence 99999999999999999999999999998887777665542 3689999999999999976 699999987664
Q ss_pred --CCCC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccC-----ccccC-CCHHHHHHHHHHHHHHHHH
Q 002208 703 --PLPD----SWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFG-----VRAIR-DSEHEMMAALYLQVSIVSQ 770 (953)
Q Consensus 703 --~~p~----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~-~~~~~~~t~~~~~~~~~~~ 770 (953)
++|+ +...++++...+++|+++++.++..|++.+.. +..+..+ .+..+ .+..+.+|++|.++++++.
T Consensus 873 m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~ 951 (1053)
T TIGR01523 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCAL 951 (1053)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCccccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 1221 22234566667788999999888776644311 1000000 00000 1244678999999999999
Q ss_pred HHHhhhccCCCCccc------------------ChhHHHHHHHHHHHHHHHHHHHhhc-c--cccccccchHhHHHHHHH
Q 002208 771 ALIFVTRSRSWSYLE------------------RPGLLLVTAFVIAQLVATLIAVYAN-W--GFARIKGVGWGWAGVIWL 829 (953)
Q Consensus 771 ~~~~~~rs~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 829 (953)
+++|++|+.+.+.+. ..|.+++.+++++.++..++ +|.+ . .++++.+++|.|++ +++
T Consensus 952 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~~f~~~~l~~~w~~-~~~ 1029 (1053)
T TIGR01523 952 ILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPT-IYIPVINDDVFKHKPIGAEWGL-AAA 1029 (1053)
T ss_pred HHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHH-HhhhhhhhhhhccCCcchHHHH-HHH
Confidence 999999997643221 13457777777766665443 4543 2 25677888886655 578
Q ss_pred HHHHHHHHHHHHHHHhHHhc
Q 002208 830 YSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 830 ~~~~~~~~~~~~K~~~r~~~ 849 (953)
++++.++..|++|++.|++.
T Consensus 1030 ~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1030 ATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 88888899999999877664
No 5
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6.2e-132 Score=1228.27 Aligned_cols=808 Identities=27% Similarity=0.411 Sum_probs=677.4
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccccccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 002208 17 DLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKE-SKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPP 95 (953)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~ 95 (953)
..+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4557899999999999999999999999999999999998765 57889999999999999999999999975
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC------CeEEEEEccCcCCCcEEEEcCCCccccc
Q 002208 96 DWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD------GKWSEEEAAILVPGDIISIKLGDIIPAD 169 (953)
Q Consensus 96 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD 169 (953)
+|.++++|++++++|..++++||+|+++++++|+++.+++++|+|| |++++|++++|||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred EEEEecCCeEEeecCCCCCCeeEecCCCC-------------cccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-C
Q 002208 170 ARLLEGDPLKVDQSALTGESLPVTKNPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 235 (953)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~ 235 (953)
|+|++|+++.||||+|||||.||.|.+++ ++|+||.|.+|++.++|++||.+|++||++++++++ .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccc
Q 002208 236 QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (953)
Q Consensus 236 ~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilv 315 (953)
+++|+|+.+++++++++.+.++.+.+.++ .+.+...+|.+++..++++++++|||+||++++++++.|+.+|+|+|+++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 78999999999988765443332222222 22233457888999999999999999999999999999999999999999
Q ss_pred cchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCc--CCChHHHHHHHhcCCh--hh
Q 002208 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTE--NQDAIDAAIVGMLADP--KE 391 (953)
Q Consensus 316 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~ 391 (953)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999987531 22445667777777655432 3699999999876532 22
Q ss_pred hhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeE
Q 002208 392 ARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGLRS 461 (953)
Q Consensus 392 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~ 461 (953)
....++.++++||||.+|+|++++.+.++.+..++|||||.|+++|+. +++.++++.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345688899999999999999998877777889999999999999964 2234567778889999999999
Q ss_pred EEEEEeccCCCCC---CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC
Q 002208 462 LAVARQEVPERTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 538 (953)
Q Consensus 462 L~vA~~~~~~~~~---~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 538 (953)
+++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998754321 12478999999999999999999999999999999999999999999999999999952 3
Q ss_pred ccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhh
Q 002208 539 ASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 618 (953)
Q Consensus 539 ~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~ 618 (953)
.++.|.+.+ .++++++++.+++.++|||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 466666554 7889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHhhhhchhccccC
Q 002208 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 697 (953)
Q Consensus 619 aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~~~~~~~l~~d 697 (953)
+||+||++|+|++|+.++++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988888777766666 6999999999999999778999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002208 698 RVKPSP--LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFV 775 (953)
Q Consensus 698 ~~~~~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 775 (953)
+++++. +|.+|+...+...+++.|++.+++++..|++++.. ++... .......++..|+.+++++.+++|+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 999874 67889888888888888999888887776665421 11100 0001234556799999999999999
Q ss_pred hccCC-CCcccChhHHHHHHHHHHHHHHHHHHHhhcccccccccch--HhHHHHHHHHHHHHHHHHHHHHHHhHHhc
Q 002208 776 TRSRS-WSYLERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVG--WGWAGVIWLYSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 776 ~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 849 (953)
+|+++ ++|..+|.+..+++.++.+++..++++..-.+++++.+++ +..|+++++++.. +..++.|....+.+
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 99987 4444444444444444444433333211112345566666 4444443333333 56788777644433
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2e-131 Score=1225.81 Aligned_cols=817 Identities=25% Similarity=0.417 Sum_probs=678.5
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----
Q 002208 16 VDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANG---- 90 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~---- 90 (953)
...|..+.+|+++.|+++.+|||++||++|+++||+|++++++ .++|+.|+++|++|+.++|+++++++++++..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3567889999999999999999999999999999999999766 56889999999999999999999999987421
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC------CeEEEEEccCcCCCcEEEEcCCC
Q 002208 91 EGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD------GKWSEEEAAILVPGDIISIKLGD 164 (953)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------G~~~~i~~~~Lv~GDiV~l~~Gd 164 (953)
.+...+|.++++|++++++|+.++++||++++++.++|+++.+++++|+|| |++++|++++|||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 123358999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred cccccEEEEecCCeEEeecCCCCCCeeEecCC-----------------------CCcccccceeeeceEEEEEEEecch
Q 002208 165 IIPADARLLEGDPLKVDQSALTGESLPVTKNP-----------------------GDEVFSGSTCKQGEIEAVVIATGVH 221 (953)
Q Consensus 165 ~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~-----------------------g~~v~~Gs~v~~G~~~~vVi~tG~~ 221 (953)
+|||||+|++|+++.||||+|||||.||.|.+ +|++|+||.|.+|++.++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999889999999999999999985 3689999999999999999999999
Q ss_pred hHHHHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHH
Q 002208 222 TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301 (953)
Q Consensus 222 T~~gki~~l~~~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~ 301 (953)
|++||+++++.+.+.++++|+.++++++++..+..+++.+.++ .......+|.+++..++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~-~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL-INGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 9999999999876677899999999887654332222222111 222234678889999999999999999999999999
Q ss_pred HHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccC--cCCChHH
Q 002208 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRT--ENQDAID 379 (953)
Q Consensus 302 ~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~ 379 (953)
+.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ..+||+|
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 9999999999999999999999999999999999999999999988652 2234456677776654332 2469999
Q ss_pred HHHHHhcCChh--hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc----------cHHHHHHH
Q 002208 380 AAIVGMLADPK--EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKV 447 (953)
Q Consensus 380 ~ai~~~~~~~~--~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~ 447 (953)
.|++.++.... .....++.++.+||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 99998875321 1234678899999999999999999877888899999999999999963 23345677
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCC-----CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTK-----ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~-----~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA 522 (953)
.+..++++++|+|++++||++++..+. +..|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 888899999999999999998765321 235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhh
Q 002208 523 KETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 602 (953)
Q Consensus 523 ~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~ 602 (953)
.+||+++||.. ..++.|.+.+ .++++++.+.+++.++|||++|+||+++|+.||++|++|+|||||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999963 3456666554 788899999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHH
Q 002208 603 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWK-FDFSPFMVL 681 (953)
Q Consensus 603 AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il 681 (953)
||||||||+|+|+||++||+||++|+|++|+.++++||++|+||+||+.|.++.|+..++.+++..++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988777666555555 789999999
Q ss_pred HHHHhhhhchhccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHH
Q 002208 682 IIAILNDGTIMTISKDRVKPSP--LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMA 759 (953)
Q Consensus 682 ~i~l~~~~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t 759 (953)
|+|+++|.+.+++++|+++++. +|++|+.+.+-..++..|++.+++++..|++.+.. +. .+. . ......++
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t 808 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQS 808 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHH
Confidence 9999999878999999998775 78888766555555567777777777665543211 00 010 0 00012457
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCcccCh-hHHHHHHHHHHHHHHHHHHHhhcccccccccchHhHHHHHHHHHHHHHHHH
Q 002208 760 ALYLQVSIVSQALIFVTRSRSWSYLERP-GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPL 838 (953)
Q Consensus 760 ~~~~~~~~~~~~~~~~~rs~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (953)
..|+.+++++.+++|++|+++.++++++ .+..+++.++.+++.+++++..--.++++.++++.+|++++.++++++++.
T Consensus 809 ~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 888 (903)
T PRK15122 809 GWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVA 888 (903)
T ss_pred HHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999874444444 333333333333333333220001244677788887777788888888888
Q ss_pred HHHHHHhHHh
Q 002208 839 DVMKFAIRYI 848 (953)
Q Consensus 839 ~~~K~~~r~~ 848 (953)
++.|.+.++.
T Consensus 889 e~~k~~~~r~ 898 (903)
T PRK15122 889 QGMKRFYIRR 898 (903)
T ss_pred HHHHHHHhhh
Confidence 8888654443
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-132 Score=1235.50 Aligned_cols=782 Identities=32% Similarity=0.504 Sum_probs=665.1
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCccccc-ccchHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 002208 14 ETVDLERIPIE--EVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEK-KESKILKFLGFMWNPLSWVMEAAAVMAIALAN 89 (953)
Q Consensus 14 ~~~~~~~~~~~--~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~ 89 (953)
....+|..+.+ ++...+.++ .+||+++|+.+|+++||+|++++. +.+.|.+|+.+|++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34577788788 899999887 679999999999999999999965 5788999999999999999999999999986
Q ss_pred CCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCc
Q 002208 90 GEGKPPDW----QDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDI 165 (953)
Q Consensus 90 ~~~~~~~~----~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~ 165 (953)
.| .++..|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEecCCeEEeecCCCCCCeeEecCC--------------CCcccccceeeeceEEEEEEEecchhHHHHHHHhh
Q 002208 166 IPADARLLEGDPLKVDQSALTGESLPVTKNP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (953)
Q Consensus 166 IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~ 231 (953)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+++|++.|+|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhh
Q 002208 232 DST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (953)
Q Consensus 232 ~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~ 310 (953)
... ...+|+|+.+++++.++..+.+++.++.+++.+...+.+|...+..++++++++||++||+.++++++.|+.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 6899999999999988665555444443333333223448899999999999999999999999999999999999
Q ss_pred CCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCC---------hHHHHHHHHHhccC--c------
Q 002208 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVE---------KDHVMLLAARASRT--E------ 373 (953)
Q Consensus 311 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~---------~~~~l~~a~~~~~~--~------ 373 (953)
+++++|+++++|+||++|+||||||||||+|+|+|.+++...-....+ ...++..++.|+.. .
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999988642011122 01244545555532 2
Q ss_pred CCChHHHHHHHhcC------ChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc-------c
Q 002208 374 NQDAIDAAIVGMLA------DPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA-------K 440 (953)
Q Consensus 374 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 440 (953)
.+||+|.|++..+. +.......+++++++||||+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 35999999999875 3344556667899999999999999999977788999999999999999974 4
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC----CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcC
Q 002208 441 EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK----ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (953)
Q Consensus 441 ~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~----~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTG 516 (953)
++.++.+++..++|+++|||+|++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||+||||||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5667889999999999999999999998766543 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccC
Q 002208 517 DQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVND 596 (953)
Q Consensus 517 D~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND 596 (953)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||++|+||.++|+.||++|++|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999997654333366666555 677889999999999999999999999999999999999999999999
Q ss_pred HHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc-C
Q 002208 597 APALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALI-WK-F 673 (953)
Q Consensus 597 ~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-~~-~ 673 (953)
+||||+|||||||| +|+|+||+|||+++++++|.+|+.+|+|||++|+|++|++.|.+++|+..++.++++.++ .+ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999997 899999999999999999999999999999999999999999999999877766665544 44 6
Q ss_pred CccHHHHHHHHHhhhhc-hhccccCCCC------CCCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 002208 674 DFSPFMVLIIAILNDGT-IMTISKDRVK------PSPLPDS--WKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDK 744 (953)
Q Consensus 674 ~~~~~~il~i~l~~~~~-~~~l~~d~~~------~~~~p~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 744 (953)
||+|+|++|+|+++|++ +++++.++++ |+++|.+ |+.+.++.+.+..|...+++.++.|.+.+... ....
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~-~~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGF-IANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Confidence 89999999999999997 5888877532 2234555 66666777677778888888777766655321 1111
Q ss_pred cCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccC---hhHHHHHHHHHHHHHHHHHHH
Q 002208 745 FGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLER---PGLLLVTAFVIAQLVATLIAV 807 (953)
Q Consensus 745 ~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~ 807 (953)
.+... .....++++|+.++++++++.+..|+.+.+|++. +++.++.++++..++..++.+
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~ 872 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIF 872 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 11100 1566789999999999999999999987665554 466777666666665554433
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.4e-130 Score=1217.25 Aligned_cols=810 Identities=25% Similarity=0.397 Sum_probs=672.1
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 002208 16 VDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKP 94 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~ 94 (953)
.+.|..+.+++++.|+++.+|||++||++|+++||+|++++++ .++|+.|+++|++|++++++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 3567889999999999999999999999999999999998876 568899999999999999999999999875
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEE------CCeEEEEEccCcCCCcEEEEcCCCcccc
Q 002208 95 PDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLR------DGKWSEEEAAILVPGDIISIKLGDIIPA 168 (953)
Q Consensus 95 ~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R------dG~~~~i~~~~Lv~GDiV~l~~Gd~IPa 168 (953)
+|.++++|++++++|+.+++++|+|++++.++|+++.+++++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cEEEEecCCeEEeecCCCCCCeeEecCCCC-------------cccccceeeeceEEEEEEEecchhHHHHHHHhhhccC
Q 002208 169 DARLLEGDPLKVDQSALTGESLPVTKNPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 235 (953)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~ 235 (953)
||+|++|+++.||||+|||||.|+.|.+|+ ++|+||.|.+|+++++|++||.+|++||+++++.+.+
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999988999999999999999999874 6999999999999999999999999999999998866
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccc
Q 002208 236 QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (953)
Q Consensus 236 ~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilv 315 (953)
+++|+|+.++++++++..++++.+.+.++ .+.+...+|.+++..++++++++|||+||++++++++.|+++|+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 77899999999998765544432322222 22233457888999999999999999999999999999999999999999
Q ss_pred cchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCc--CCChHHHHHHHhcCCh--hh
Q 002208 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTE--NQDAIDAAIVGMLADP--KE 391 (953)
Q Consensus 316 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~ 391 (953)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++.+++.++..+ .+||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 99999999999999999999999999999988641 22445667777776654432 3599999999877532 22
Q ss_pred hhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeE
Q 002208 392 ARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA----------KEDLKKKVHAIIDKYAERGLRS 461 (953)
Q Consensus 392 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~ 461 (953)
.+..++.++.+||||++|+|++++.+.++.++.++|||||.++++|+. +++.++++++.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678899999999999999998876666789999999999999963 2344567888899999999999
Q ss_pred EEEEEeccCCCCC---CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC
Q 002208 462 LAVARQEVPERTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 538 (953)
Q Consensus 462 L~vA~~~~~~~~~---~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 538 (953)
+++||++++.++. +..|++|+|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998765432 12478999999999999999999999999999999999999999999999999999963 2
Q ss_pred ccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhh
Q 002208 539 ASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 618 (953)
Q Consensus 539 ~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~ 618 (953)
.++.|.+.+ .++++++.+.+++.++|||++|+||+++|+.+|++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 455665544 6788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHhhhhchhccccC
Q 002208 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 697 (953)
Q Consensus 619 aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~~~~~~~l~~d 697 (953)
+||+||++|+|++|+.++++||++|+||++++.|.++.|+..++.+++..++.+ +|++|+|++|+|+++|.+.+++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999988887776666555 7999999999999999778999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002208 698 RVKPSP--LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFV 775 (953)
Q Consensus 698 ~~~~~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 775 (953)
+++++. +|.+|+.+.+...+++.|++.+++++..|++++.... .... ......++..|+.+++++.+++|+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------ANTV-EEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccch-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 998873 5666877777777778899888877766655432110 0000 012235688899999999999999
Q ss_pred hccCCCCcccCh-hHHHHHHHHHHHHHHHHHHHhhcccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 002208 776 TRSRSWSYLERP-GLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYI 848 (953)
Q Consensus 776 ~rs~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~ 848 (953)
+|+++..+++++ .+..+++.++.+++.+.++..+--.++++.++++.|+.+++++.+.+.++.|+.|.+..+.
T Consensus 790 ~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 863 (867)
T TIGR01524 790 IRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYMATMQLVKTFYIRR 863 (867)
T ss_pred hCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999874444444 3232233333333222222110012345565543322222222333336678888764443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2e-126 Score=1196.77 Aligned_cols=832 Identities=23% Similarity=0.371 Sum_probs=679.9
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-
Q 002208 14 ETVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALANG- 90 (953)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~- 90 (953)
...|+|..+.+++++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++++++++++++....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 45799999999999999998 6699999999999999999998754 66889999999999999999999998875311
Q ss_pred -----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCc
Q 002208 91 -----EGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDI 165 (953)
Q Consensus 91 -----~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~ 165 (953)
.....+|.++++|++++++|++++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 112347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEecCCeEEeecCCCCCCeeEecCCCC----------cccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-
Q 002208 166 IPADARLLEGDPLKVDQSALTGESLPVTKNPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (953)
Q Consensus 166 IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~----------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~- 234 (953)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|++||+++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988999999999999999998874 799999999999999999999999999999998765
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCcc
Q 002208 235 NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (953)
Q Consensus 235 ~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~il 314 (953)
.+++|+|+.++++++++...++++.++.+ +.+...+.+|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 46799999999998876544433222222 22233456788888999999999999999999999999999999999999
Q ss_pred ccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehh--c-cC--------CCh-----HHHHHHHHHhccC------
Q 002208 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--A-KG--------VEK-----DHVMLLAARASRT------ 372 (953)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~--~-~~--------~~~-----~~~l~~a~~~~~~------ 372 (953)
+|+++++|+||++++||||||||||+|+|+|.++++... . .+ .+. +.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 999999999999999999999999999999998764210 0 00 111 2355555555421
Q ss_pred ---------cCCChHHHHHHHhcC----ChhhhhcCcceEEeecCCCCCceEEEEEEcC---CCcEEEEEeCcHHHHHHH
Q 002208 373 ---------ENQDAIDAAIVGMLA----DPKEARAGIREVHFFPFNPVDKRTALTYIDS---DGHWHRASKGAPEQILAL 436 (953)
Q Consensus 373 ---------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa~e~il~~ 436 (953)
..+||+|.|++.++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999998763 3344567789999999999999999887632 246789999999999999
Q ss_pred hhc----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-----------CCCCCCcEEEEEeecCCCCCC
Q 002208 437 CNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-----------ESPGGPWQFVGLLPLFDPPRH 495 (953)
Q Consensus 437 ~~~----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-----------~~~e~~l~llG~i~i~D~lR~ 495 (953)
|+. +++.++.+++.+++|+++|+||+++||+++++++. +..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 963 23456778889999999999999999998864321 123789999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------CccccCcccccccCch
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SASLLGQDKDASIAAL 553 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~~~~~~~~~~~~ 553 (953)
|++++|++|+++||+|+|+|||++.||.++|+++|+..+... ..++.|.+.+ .++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~-~l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK-DMTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh-hCCHH
Confidence 999999999999999999999999999999999999643210 1244554443 56777
Q ss_pred hHHHHHHhcC--cEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCch
Q 002208 554 PVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 554 ~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~ 630 (953)
++++.+++.. ||||++|+||+++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||++|++|+|+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8888888765 99999999999999999999999999999999999999999999999 79999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCC
Q 002208 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLP 705 (953)
Q Consensus 631 ~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p 705 (953)
+|+.++++||++|+|+++++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|++ ++++++|++.+. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999887777666554 45689999999999999986 699999887764 233
Q ss_pred Cccc-----hHHHH-HHHHHHHHHHHHHHHHHHHHHHh-hccCCC-ccCc---------cccCCC-------------HH
Q 002208 706 DSWK-----LKEIF-ATGVVLGGYLALMTVIFFWAMHE-TDFFPD-KFGV---------RAIRDS-------------EH 755 (953)
Q Consensus 706 ~~~~-----~~~~~-~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~~ 755 (953)
.+++ .+..+ .+.+..|+++++..+++|++.+. .+|... .++. .+.... ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 3332 12233 33455698999888877665442 121110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCcc--cChhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchHhHHHHHHHHH
Q 002208 756 EMMAALYLQVSIVSQALIFVTRSRSWSYL--ERPGLLLVTAFVIAQLVATLIAVYAN--WGFARIKGVGWGWAGVIWLYS 831 (953)
Q Consensus 756 ~~~t~~~~~~~~~~~~~~~~~rs~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 831 (953)
+.+|++|..+++++.++++++|+.+.+++ ..+|++++.++++.+++..++ .|.+ -.++++.+++|.+|+.+++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 46899999999999999999999764422 245567777776666555444 4433 245567788888888888888
Q ss_pred HHHHHHHHHHHHHhHHh
Q 002208 832 IVFYVPLDVMKFAIRYI 848 (953)
Q Consensus 832 ~~~~~~~~~~K~~~r~~ 848 (953)
++.++..++.|++.|++
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 88888899999887764
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.1e-125 Score=1175.21 Aligned_cols=800 Identities=27% Similarity=0.406 Sum_probs=675.3
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCcccccc-cchHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 002208 16 VDLERIPIEEVFEQLKCT-REGLS-STEGANRLQIFGPNKLEEKK-ESKILKFLGFM-WNPLSWVMEAAAVMAIALANGE 91 (953)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt-~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~-~~~~~~il~~~ail~~~l~~~~ 91 (953)
-+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 378999999999999998 56999 99999999999999999765 67889999999 9999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEE
Q 002208 92 GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADAR 171 (953)
Q Consensus 92 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 171 (953)
+|.+++.|++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEeecCCCCCCeeEecCCCC--------------cccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CC
Q 002208 172 LLEGDPLKVDQSALTGESLPVTKNPGD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 236 (953)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~K~~g~--------------~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~ 236 (953)
|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. ..
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999987999999999999999999874 799999999999999999999999999999999876 46
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCcccc
Q 002208 237 VGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (953)
Q Consensus 237 ~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk 316 (953)
++|+|+.++++++++....++.+++.+++.| ..+.++.+++..++++++++|||+||++++++++.++++|+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999998765443332222233333 345678889999999999999999999999999999999999999999
Q ss_pred chhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh-hc---cC--C-------------------ChHHHHHHHHHhcc
Q 002208 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV-FA---KG--V-------------------EKDHVMLLAARASR 371 (953)
Q Consensus 317 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~-~~---~~--~-------------------~~~~~l~~a~~~~~ 371 (953)
+++++|+||++|+||||||||||+|+|+|.+++... .. .+ + ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999999876421 00 00 0 01234555555443
Q ss_pred Cc--------CCChHHHHHHHhcCCh--hhhhcCcceEEeecCCCCCceEEEEEEcC-CCcEEEEEeCcHHHHHHHhhc-
Q 002208 372 TE--------NQDAIDAAIVGMLADP--KEARAGIREVHFFPFNPVDKRTALTYIDS-DGHWHRASKGAPEQILALCNA- 439 (953)
Q Consensus 372 ~~--------~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~- 439 (953)
.. .+||+|.|++.++... +..+..++.++.+||+|.+|||+++++.. +++++.++|||||.|+.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 21 2479999999876422 22345688899999999999999988753 567889999999999999963
Q ss_pred ----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCC
Q 002208 440 ----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV 509 (953)
Q Consensus 440 ----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI 509 (953)
+++.++++++.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++|+++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 133456788889999999999999999975 45799999999999999999999999999999
Q ss_pred cEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEE
Q 002208 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGM 589 (953)
Q Consensus 510 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~ 589 (953)
+++|+|||++.||.++|+++||..+. ...+.|.+.+ .++++++++.+++..+|||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997542 2345555443 67888999999999999999999999999999999999999
Q ss_pred EcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 590 TGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 668 (953)
Q Consensus 590 ~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~ 668 (953)
+|||+||+|||++|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+||++++.|.++.|+..++.+++..
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999998 7999999999999999999999999999999999999999999999998766655443
Q ss_pred -HhhcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002208 669 -LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLPDSWK----LKEIFATGVVLGGYLALMTVIFFWAMHETD 739 (953)
Q Consensus 669 -~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p~~~~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 739 (953)
+..+.|++|+|++|+|+++|++ ++++++|++++. ++|.+++ .+..+...+++|+++++++++.|+..+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 4466799999999999999988 489999887654 2333332 34566677788999888877666643310
Q ss_pred cCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHhhc--cccc
Q 002208 740 FFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE---RPGLLLVTAFVIAQLVATLIAVYAN--WGFA 814 (953)
Q Consensus 740 ~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 814 (953)
+ ....+.+|++|..+++++.++.|++|+++.++++ ..|++++.++++..++..++ +|.+ -.++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1 0234567999999999999999999997755433 23457777766666554444 4432 2345
Q ss_pred ccccchHhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 002208 815 RIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRY 847 (953)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~ 847 (953)
++.+++|..|+.+++++++.+++.++.|++.|+
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 677888988888888999999999999988764
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=6e-125 Score=1180.49 Aligned_cols=814 Identities=22% Similarity=0.344 Sum_probs=665.7
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccccccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhc------CC
Q 002208 22 PIEEVFEQLKCT-REGLS--STEGANRLQIFGPNKLEEKKE-SKILKFLGFMWNPLSWVMEAAAVMAIALAN------GE 91 (953)
Q Consensus 22 ~~~~~~~~l~~~-~~GLt--~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~il~~~ail~~~l~~------~~ 91 (953)
..++++++|+++ ++||| ++||++|+++||+|+++.++. ++|+.|+++|++|++++|+++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999 56999 999999999999999998865 678899999999999999999999999762 12
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcC-CCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccE
Q 002208 92 GKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAG-LAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADA 170 (953)
Q Consensus 92 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~-~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~ 170 (953)
+...+|.++++|+++++++.++++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 578999999999999999999999999999999999999
Q ss_pred EEEecCCeEEeecCCCCCCeeEecCCCCc--ccccceeeeceEEEEEEEecchhHHHHHHHhhhccCCCCcHHHHHHHHH
Q 002208 171 RLLEGDPLKVDQSALTGESLPVTKNPGDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 248 (953)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~K~~g~~--v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~~~~~lq~~~~~i~ 248 (953)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|++||+++++..+++++++|+.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998875 9999999999999999999999999999999987767789999999988
Q ss_pred HHHHHHHHHHHHHHHHHH---Hhcc---c---------cchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCc
Q 002208 249 NFCICSIAVGMLVEIIVM---YPIQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (953)
Q Consensus 249 ~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~i 313 (953)
+++...+++..++.++++ +... + .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 775433222121111111 1111 1 246677888999999999999999999999999999999999
Q ss_pred cccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehh--c-cC----CC--hHHHHHHHHH-hccCc----------
Q 002208 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--A-KG----VE--KDHVMLLAAR-ASRTE---------- 373 (953)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~--~-~~----~~--~~~~l~~a~~-~~~~~---------- 373 (953)
++|+++++|+||++|+||||||||||+|+|+|.+++.... . .+ .+ ..+++..++. ++...
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999998764211 0 00 00 1122332322 22211
Q ss_pred -CCChHHHHHHHhcC----ChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhcc--------
Q 002208 374 -NQDAIDAAIVGMLA----DPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-------- 440 (953)
Q Consensus 374 -~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 440 (953)
.+||+|.|++.++. +..+.+..++.++.+||+|++|||+++++..+++++.++|||||.|+++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 25899999998764 33334456778889999999999999998777778999999999999999641
Q ss_pred --HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC---CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEc
Q 002208 441 --EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (953)
Q Consensus 441 --~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~---~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miT 515 (953)
++.++++++.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++|+++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235678888999999999999999999864332 33478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCcc
Q 002208 516 GDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVN 595 (953)
Q Consensus 516 GD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~N 595 (953)
||++.||.++|++|||.++. ..++.|.+.+ .++++++++.+++.++|||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997532 2455665544 67788999999999999999999999999999999999999999999
Q ss_pred CHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 002208 596 DAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI-ALIWKF 673 (953)
Q Consensus 596 D~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~ 673 (953)
|+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+||++++.|.+++|+..++..++. .++.++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766655554 444677
Q ss_pred CccHHHHHHHHHhhhhc-hhccccCCCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Q 002208 674 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLPDSWK----LKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKF 745 (953)
Q Consensus 674 ~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p~~~~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 745 (953)
|++|+|++|+|+++|++ ++++++|++.+. .+|.+|+ .+.++...+..|+++++++++.+++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999986 699999987664 2444433 3456666788899999888877665431 1110 0
Q ss_pred Cccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCC--Cc---ccChhHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 002208 746 GVRA-IRDSEHEMMAALYLQVSIVSQALIFVTRSRSW--SY---LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGV 819 (953)
Q Consensus 746 g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~--~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (953)
+... ........+|++|.++++++.++.+++|+.+. +| ++| ++++.++++..++..++..++ -.++++.++
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n--~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l 913 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKN--RIFVTIMGFTFGFQVIIVEFG-GSFFSTVSL 913 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCccccccccccc--HHHHHHHHHHHHHHHHHHHHH-HHHhcccCC
Confidence 1000 00123457899999999999999999999653 22 334 356655555555543443332 234567788
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHH
Q 002208 820 GWGWAGVIWLYSIVFYVPLDVMKFA 844 (953)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~K~~ 844 (953)
+|..|+.+++++++.+++.++.|++
T Consensus 914 ~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 914 SIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888788888888888888875
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-124 Score=1062.44 Aligned_cols=812 Identities=22% Similarity=0.333 Sum_probs=647.3
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHHhcCCCcccccccc-hHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCCCCc
Q 002208 22 PIEEVFEQLKCT-REGLSS--TEGANRLQIFGPNKLEEKKES-KILKFLGFMWNPLSWVMEAAAVMAIALANG-EGKPPD 96 (953)
Q Consensus 22 ~~~~~~~~l~~~-~~GLt~--~e~~~r~~~~G~N~i~~~~~~-~~~~~l~~~~~~~~~il~~~ail~~~l~~~-~~~~~~ 96 (953)
-.+.+++.|+|+ .+||+. +|.++|++.||.|.+|+++++ +|+..++.+.+.-..+|.++|++|+.++.. .+....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 378999999999 569987 899999999999999998854 556668888888889999999999998754 344679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc-CCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec
Q 002208 97 WQDFVGIVCLLVINSTISFIEENNAGNAAAALMA-GLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG 175 (953)
Q Consensus 97 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~-~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 175 (953)
|++++.|++.+++..++..+.+|+.++....|++ ....+..|+|||+.++|+..|||||||+.|+.||.+||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999999887766656666666666666665553 345678999999999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCCCeeEecCC--CCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHH-
Q 002208 176 DPLKVDQSALTGESLPVTKNP--GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC- 251 (953)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~K~~--g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~- 251 (953)
+++.||||+|||||.++.|.+ +.++++||++.+|.+.++|+++|.+|+.|++..++.... +++|+|-.+++++..+
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 347899999999999999999999999999999888775 8999999988876542
Q ss_pred --HHHHHHHHHHHHHHHHhcc-----cc---ch--------HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCc
Q 002208 252 --ICSIAVGMLVEIIVMYPIQ-----HR---KY--------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (953)
Q Consensus 252 --~~~i~~~~~~~~~~~~~~~-----~~---~~--------~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~i 313 (953)
.+.++...++.++..|+.. +. .+ ...+...+.++++++|+|||+++++++++++++|.++++
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1222222222233334321 11 11 122334455678899999999999999999999999999
Q ss_pred cccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhcc--------CCChHH--HHHHH-HHhcc-----------
Q 002208 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAK--------GVEKDH--VMLLA-ARASR----------- 371 (953)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~--------~~~~~~--~l~~a-~~~~~----------- 371 (953)
+||+++|+|+||+.++||+|||||||+|+|+|.+.++..... ..++.- ++..+ +.++.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 999999999999999999999999999999999977632111 122211 11111 11111
Q ss_pred --CcCCChHHHHHHHhc----CChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc------
Q 002208 372 --TENQDAIDAAIVGML----ADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA------ 439 (953)
Q Consensus 372 --~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 439 (953)
...++|++.|++++. .|.++.+...+.++++||||++|+|+++++.++|..+.++|||.|.|+..|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 012479999998875 46667788889999999999999999999988877349999999999999974
Q ss_pred -----cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCC-------C-CCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHh
Q 002208 440 -----KEDLKKKVHAIIDKYAERGLRSLAVARQEVPER-------T-KESPGGPWQFVGLLPLFDPPRHDSAETIRRALN 506 (953)
Q Consensus 440 -----~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~-------~-~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~ 506 (953)
+++.+..+++.++.||++|+|++|+||++..+. + .+..+.+|+++|+++|+||.|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566899999999999999999999984332 1 246688999999999999999999999999999
Q ss_pred cCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCE
Q 002208 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHI 586 (953)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~ 586 (953)
|||+|.|+||||..||++||.+|||.++......+.|.+.. .+++++.++++.+.+|+||.+|.||+-+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 99999999999999999999999998875554566666554 88999999999999999999999999999999999999
Q ss_pred EEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 002208 587 CGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI-VFGF 664 (953)
Q Consensus 587 V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~-~~~~ 664 (953)
||+||||.||+||||+||||.||| .||++||++|||+|+||||++|+.+++|||.+|+||+||++|+++.|+.. ++.|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999854 4445
Q ss_pred HHHHHhhcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---C----CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 665 MFIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----LPDSWKLKEIFATGVVLGGYLALMTVIFFWAMH 736 (953)
Q Consensus 665 ~~~~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~----~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 736 (953)
..+...-..|++++|+||+|+++|.+ ++++++|++.+. + +..+...+.+|...+.+++|+.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 54555556899999999999999988 699999998653 2 233444566788889999999888876555432
Q ss_pred hhccCCCccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCC--CC---cccChhHHHHHHHHHHHHHHHHHHHhhc
Q 002208 737 ETDFFPDKFGVRA-IRDSEHEMMAALYLQVSIVSQALIFVTRSRS--WS---YLERPGLLLVTAFVIAQLVATLIAVYAN 810 (953)
Q Consensus 737 ~~~~~~~~~g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~--~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 810 (953)
. .| +... .+....+..|++|-++++++.++-|+.|.-. -. .++|+ ++++++...++..++.+...
T Consensus 901 ~--if----~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~ 971 (1034)
T KOG0204|consen 901 S--IF----GLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFG 971 (1034)
T ss_pred h--hh----ccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhc
Confidence 1 22 1111 1112445669999999999999999999865 11 22333 33333333333333334333
Q ss_pred ccccccccchHhHHHHHHHHHHHHHHHHHHHHH
Q 002208 811 WGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKF 843 (953)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~ 843 (953)
..++...+++|..|++++++.+..+..-.+.|.
T Consensus 972 g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~ 1004 (1034)
T KOG0204|consen 972 GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKC 1004 (1034)
T ss_pred CcceeeecccHHHHHHHHHHHHHHHHHHHHhee
Confidence 445678888888777766666555544444443
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.6e-116 Score=1097.20 Aligned_cols=779 Identities=27% Similarity=0.368 Sum_probs=626.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcC---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC
Q 002208 65 FLGFMWNPLSWVMEAAAVMAIALANG---EGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD 141 (953)
Q Consensus 65 ~l~~~~~~~~~il~~~ail~~~l~~~---~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd 141 (953)
+++||++|++++|+++++++++++.. .....+|.++++|++++++|+.++++||+++++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999998532 222358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC-------------Ccccccceeee
Q 002208 142 GKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG-------------DEVFSGSTCKQ 208 (953)
Q Consensus 142 G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g-------------~~v~~Gs~v~~ 208 (953)
|++++|+++||||||+|.|++||.|||||+|++|+++.||||+|||||.|+.|.++ +++|+||.|.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998899999999999999999876 78999999999
Q ss_pred ceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccch----HHHH
Q 002208 209 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPI-----QHRKY----RDGI 278 (953)
Q Consensus 209 G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~-----~~~~~----~~~~ 278 (953)
|++.++|++||.+|++||++++++.. .+++|+|+.+++++.++...+++.+++.+++.... ...+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 47899999999998775443333222222221111 01122 2344
Q ss_pred HHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh------
Q 002208 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV------ 352 (953)
Q Consensus 279 ~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~------ 352 (953)
..++++++++||++||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999876421
Q ss_pred -----hccCCC-------------------hHHHHHHHHHhccCc------------CCChHHHHHHHhcCChh------
Q 002208 353 -----FAKGVE-------------------KDHVMLLAARASRTE------------NQDAIDAAIVGMLADPK------ 390 (953)
Q Consensus 353 -----~~~~~~-------------------~~~~l~~a~~~~~~~------------~~~~~~~ai~~~~~~~~------ 390 (953)
...+++ .+.++..++.|+... .+||+|.|++.++.+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 000010 123444455554321 25899999987653210
Q ss_pred --------------hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc-----------cHHHHH
Q 002208 391 --------------EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA-----------KEDLKK 445 (953)
Q Consensus 391 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 445 (953)
..+..++.++.+||||++|||++++++ ++++++++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123557789999999999999999876 467889999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEEeccCCCC----------CCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEE
Q 002208 446 KVHAIIDKYAE-RGLRSLAVARQEVPERT----------KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 514 (953)
Q Consensus 446 ~~~~~~~~~a~-~GlR~L~vA~~~~~~~~----------~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~mi 514 (953)
++.+.+++|++ +|+|||++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 14468899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCC--CccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcC
Q 002208 515 TGDQLAIAKETGRRLGMGTNMYP--SASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGD 592 (953)
Q Consensus 515 TGD~~~tA~~ia~~lGi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GD 592 (953)
|||++.||.++|+++|+..+... ...+.|.+. ..+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 123444443 356677788888888999999999999999999999999999999
Q ss_pred CccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002208 593 GVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIAL-IW 671 (953)
Q Consensus 593 G~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~ 671 (953)
|+||+||||+||||||||+|++++|++||+++.+|+|++|++++++||++|+|+++++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987777666544 45
Q ss_pred cCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCCC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCC
Q 002208 672 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLPD----SWKLKEIFATGVVLGGYLALMTVIFFWAMHET-DFFP 742 (953)
Q Consensus 672 ~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p~----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~~~ 742 (953)
+.||+|+|++|+|+++|++ +++++++++++. .+|. +...++.+..++..|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999976 588999887654 1222 22234566677778999998877666544321 2111
Q ss_pred C--cc--Cccc---c----CCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc---ChhHHHHHHHHHHHHHHHHHHHh
Q 002208 743 D--KF--GVRA---I----RDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE---RPGLLLVTAFVIAQLVATLIAVY 808 (953)
Q Consensus 743 ~--~~--g~~~---~----~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 808 (953)
. .. +..+ . .....+.+|++|.++++++.++.|++|+++.+++. .+|.+++.++++..++..++ +|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~-~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLI-LY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHH-HH
Confidence 0 00 0000 0 00124567999999999999999999997654332 23446666666655554333 44
Q ss_pred hc--ccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhH
Q 002208 809 AN--WGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIR 846 (953)
Q Consensus 809 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r 846 (953)
.+ -.++++.+++|..|+++++++++.++..++.|++.|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 234567888999998889999999999999998753
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-117 Score=1011.24 Aligned_cols=841 Identities=24% Similarity=0.409 Sum_probs=695.9
Q ss_pred chhhhccc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHH
Q 002208 7 SLEEIKNE-TVDLERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVM 83 (953)
Q Consensus 7 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail 83 (953)
++++.++| .+|.|++|.+|+.++++++ .+|||.++|.+++++-|+|.+++++ .+.|.+|++|+++.+.+++++++++
T Consensus 27 ~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l 106 (1019)
T KOG0203|consen 27 ELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAIL 106 (1019)
T ss_pred hHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHH
Confidence 68888888 5999999999999999999 7899999999999999999998776 5679999999999999999999999
Q ss_pred HHHHhc-----CCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcE
Q 002208 84 AIALAN-----GEGKPPD-WQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDI 157 (953)
Q Consensus 84 ~~~l~~-----~~~~~~~-~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDi 157 (953)
+++.+. ......+ .+-++++..++++..+..|+||.+..+-+++.+++.|+.++|+|||+...+.+++|||||+
T Consensus 107 ~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~ 186 (1019)
T KOG0203|consen 107 CFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDL 186 (1019)
T ss_pred HHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccc
Confidence 998541 1111222 2334445556677788899999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC----------CcccccceeeeceEEEEEEEecchhHHHHH
Q 002208 158 ISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFGKA 227 (953)
Q Consensus 158 V~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g----------~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki 227 (953)
|.++-||+||||.|++++..+++|+|+|||||.|..+.+. |+.|.+|.+.+|.++++|++||.+|.+|++
T Consensus 187 v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~i 266 (1019)
T KOG0203|consen 187 VEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRI 266 (1019)
T ss_pred eeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeeh
Confidence 9999999999999999999999999999999999999873 688999999999999999999999999999
Q ss_pred HHhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 002208 228 AHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (953)
Q Consensus 228 ~~l~~~-~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~ 306 (953)
+.+... ...++++++.++++..+......+ +.+.++..-...++.|.+++.+.+.++++.+|++|+..++++++.-++
T Consensus 267 a~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltltak 345 (1019)
T KOG0203|consen 267 ASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAK 345 (1019)
T ss_pred hhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHH
Confidence 998765 467889999888887664322222 222223222233778888888899999999999999999999999999
Q ss_pred HHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhcc----------------CCChHHHHHHHHHhc
Q 002208 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAK----------------GVEKDHVMLLAARAS 370 (953)
Q Consensus 307 ~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----------------~~~~~~~l~~a~~~~ 370 (953)
||+++++++|++.++|+||+.++||+|||||||+|.|+|.+.+.+.... ...-..+...+..|+
T Consensus 346 rMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn 425 (1019)
T KOG0203|consen 346 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCN 425 (1019)
T ss_pred HHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999877531110 011124556666665
Q ss_pred cC---------------cCCChHHHHHHHhc----CChhhhhcCcceEEeecCCCCCceEEEEEEcCC---CcEEEEEeC
Q 002208 371 RT---------------ENQDAIDAAIVGML----ADPKEARAGIREVHFFPFNPVDKRTALTYIDSD---GHWHRASKG 428 (953)
Q Consensus 371 ~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~---g~~~~~~KG 428 (953)
+. ..+|+.+.|++++. ++.++.++..+.+..+||||.+|+.-.++...| .+..+..||
T Consensus 426 ~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKG 505 (1019)
T KOG0203|consen 426 RAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKG 505 (1019)
T ss_pred cceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecC
Confidence 42 23578899998875 455677888899999999999999888777544 577889999
Q ss_pred cHHHHHHHhhc----------cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-----------CCCCCCcEEEEEe
Q 002208 429 APEQILALCNA----------KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-----------ESPGGPWQFVGLL 487 (953)
Q Consensus 429 a~e~il~~~~~----------~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-----------~~~e~~l~llG~i 487 (953)
|||.++++|+. ++...+.+++...++...|-||++++++.++++++ .-...+|.|+|++
T Consensus 506 ape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~ 585 (1019)
T KOG0203|consen 506 APERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLI 585 (1019)
T ss_pred ChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchh
Confidence 99999999974 45667889999999999999999999999886542 2345689999999
Q ss_pred ecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC------------CC----------ccccCcc
Q 002208 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY------------PS----------ASLLGQD 545 (953)
Q Consensus 488 ~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~------------~~----------~~l~~~~ 545 (953)
++.||||..+|+++.+||.|||||+|+||||+.||+++|+++||..... +. .++.|.
T Consensus 586 s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~- 664 (1019)
T KOG0203|consen 586 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGS- 664 (1019)
T ss_pred hccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecc-
Confidence 9999999999999999999999999999999999999999999754211 00 112333
Q ss_pred cccccCchhHHHHHHhcC--cEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCE
Q 002208 546 KDASIAALPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDI 622 (953)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDi 622 (953)
+...++.+++++++++.. ||||.||+||+.||+..|++|.+|+++|||+||+||||+|||||||| .|+|++|+|||+
T Consensus 665 eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADm 744 (1019)
T KOG0203|consen 665 ELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 744 (1019)
T ss_pred cccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcce
Confidence 334778889999998765 99999999999999999999999999999999999999999999999 999999999999
Q ss_pred eecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCccHHHHHHHHHhhhhc-hhccccCCCC
Q 002208 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI-ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVK 700 (953)
Q Consensus 623 vl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~ 700 (953)
+|+||||++|+..|++||-+|+|+||.+.|.+++|+..+..++++ ++..|+|+.++.+|.|.+.+|.. +++++||.++
T Consensus 745 ILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aE 824 (1019)
T KOG0203|consen 745 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAE 824 (1019)
T ss_pred EEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCch
Confidence 999999999999999999999999999999999999877766654 45588999999999999999987 5999999876
Q ss_pred CC---CCC-----CccchHHHHHHH-HHHHHHHHHHHHHHHHH-HHhhccCCCcc----------CccccCCCH------
Q 002208 701 PS---PLP-----DSWKLKEIFATG-VVLGGYLALMTVIFFWA-MHETDFFPDKF----------GVRAIRDSE------ 754 (953)
Q Consensus 701 ~~---~~p-----~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~-~~~~~~~~~~~----------g~~~~~~~~------ 754 (953)
.. ++| ++.-..+++.++ +..|+++++..|+.|+. +...+|++... +++++.+++
T Consensus 825 sDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWty 904 (1019)
T KOG0203|consen 825 SDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTY 904 (1019)
T ss_pred hhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccH
Confidence 43 122 233334555543 66699999999977665 44556665321 122222222
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhhhccCCCCc--ccChhHHHHHHHHHHHHHHHHHHHhhc-ccccccccchHhHH
Q 002208 755 -------HEMMAALYLQVSIVSQALIFVTRSRSWSY--LERPGLLLVTAFVIAQLVATLIAVYAN-WGFARIKGVGWGWA 824 (953)
Q Consensus 755 -------~~~~t~~~~~~~~~~~~~~~~~rs~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 824 (953)
.+.+|+.|.++++.|.+..+.+.+++-+. ....||.+++++++-.+++.++++-.. ...+++.++.|.||
T Consensus 905 eqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~w 984 (1019)
T KOG0203|consen 905 EQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWW 984 (1019)
T ss_pred HHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEE
Confidence 13568888999999999888888777554 345688999999888888777654332 22346888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhc
Q 002208 825 GVIWLYSIVFYVPLDVMKFAIRYIL 849 (953)
Q Consensus 825 ~~~~~~~~~~~~~~~~~K~~~r~~~ 849 (953)
++.+.++++.++.+|+.|+++|++.
T Consensus 985 l~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 985 LVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred EecccceeeeeeHHHHHhHhhhhCC
Confidence 9999999999999999999999886
No 15
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3e-112 Score=1075.06 Aligned_cols=751 Identities=22% Similarity=0.270 Sum_probs=592.4
Q ss_pred CCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002208 34 REGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTI 113 (953)
Q Consensus 34 ~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i 113 (953)
.+|||++|+++|+++||+|+++.+++++|..|++++++|+++++++++++ |++. .+|.+++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l-~~~~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVIL-WLLD------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHH-HHhh------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888899999999999998777666555 4433 3789999999999999999
Q ss_pred HHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEc--CCCcccccEEEEecCCeEEeecCCCCCCee
Q 002208 114 SFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIK--LGDIIPADARLLEGDPLKVDQSALTGESLP 191 (953)
Q Consensus 114 ~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~--~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~p 191 (953)
++++++++.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +||+|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888644 578999999999999999999999999999 99999999999999 699999999999999
Q ss_pred EecCCC------------------Ccccccceeee-------ceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHH
Q 002208 192 VTKNPG------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLT 245 (953)
Q Consensus 192 v~K~~g------------------~~v~~Gs~v~~-------G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~ 245 (953)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+++... +..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999862 25999999986 78999999999999999999988665 45678888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhc
Q 002208 246 AIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (953)
Q Consensus 246 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg 325 (953)
++..+++++.+++.+. .++.+...+.++...+..++.+++++||++||++++++++.|+.||+|+|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7765543332221211 122222235678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCCCCCCceEEEEeeeehhccC----------CChHHHHHHHHHhccC------cCCChHHHHHHHhcCCh
Q 002208 326 GMDVLCSDKTGTLTLNKLSVDKNLIEVFAKG----------VEKDHVMLLAARASRT------ENQDAIDAAIVGMLADP 389 (953)
Q Consensus 326 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~ai~~~~~~~ 389 (953)
++|++|||||||||+|+|+|.+......... .....+....+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998754211000 0112222333333221 23699999999876311
Q ss_pred ----hhh---------------hcCcceEEeecCCCCCceEEEEEEcCC-CcEEEEEeCcHHHHHHHhhccHHHHHHHHH
Q 002208 390 ----KEA---------------RAGIREVHFFPFNPVDKRTALTYIDSD-GHWHRASKGAPEQILALCNAKEDLKKKVHA 449 (953)
Q Consensus 390 ----~~~---------------~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 449 (953)
.+. ...+++++.+||+|++||||++++..+ ++++.++|||||.|+++|+. +..++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 000 245788999999999999999998654 56789999999999999984 345778889
Q ss_pred HHHHHHHcCCeEEEEEEeccCCC--------CCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHH
Q 002208 450 IIDKYAERGLRSLAVARQEVPER--------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (953)
Q Consensus 450 ~~~~~a~~GlR~L~vA~~~~~~~--------~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~t 521 (953)
.+++|+++|+||||+|||++++. ++++.|++|+|+|+++|+||+||+++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC---------------------------------------------------ccccCccccc--
Q 002208 522 AKETGRRLGMGTNMYPS---------------------------------------------------ASLLGQDKDA-- 548 (953)
Q Consensus 522 A~~ia~~lGi~~~~~~~---------------------------------------------------~~l~~~~~~~-- 548 (953)
|.++|++|||.++.... .+++|.+.+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996432100 0111111110
Q ss_pred ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCC
Q 002208 549 SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628 (953)
Q Consensus 549 ~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~ 628 (953)
.+.++++.+++++..||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1234567778888999999999999999999999999999999999999999999999999865 555 79999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CC
Q 002208 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PL 704 (953)
Q Consensus 629 ~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~ 704 (953)
|++|+.+|++||+++.|+++.+.|.+.+++..++.+++ ....+.+++++|++|++++.+.+ .++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999888866554433 23456889999999999999987 588888887653 22
Q ss_pred C-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccc-cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 002208 705 P-DSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRA-IRDSEHEMMAALYLQVSIVSQALIFVTRSRSWS 782 (953)
Q Consensus 705 p-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~ 782 (953)
| .+...+..+...+.+++++.++.++.|++.....|+........ -........|++| .++.++++..+..++.+..
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 3 33333455666677788888887777776665545421111000 0011223467777 6667777777778876644
Q ss_pred c----ccChhHHHHHHHHHHHHH
Q 002208 783 Y----LERPGLLLVTAFVIAQLV 801 (953)
Q Consensus 783 ~----~~~~~~~l~~~~~~~~~~ 801 (953)
| ++|+ +++.+++++.++
T Consensus 1002 f~~~~~~N~--~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 1002 FREPIYKNK--PFVYLLITGLGL 1022 (1054)
T ss_pred hhhhHHHhH--HHHHHHHHHHHH
Confidence 3 3343 445444444333
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.7e-102 Score=989.12 Aligned_cols=785 Identities=18% Similarity=0.232 Sum_probs=580.7
Q ss_pred cCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhH
Q 002208 49 FGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNA 124 (953)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~ 124 (953)
|..|.+...|++.| +.|++||.+|.+++|+++++++++... .....+...++++++++++++.+++|+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~--s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPIL--SPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCc--CCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999875 789999999999999999999998432 122234455567777778999999999999998
Q ss_pred HHHhhcCCCCeEEEEEC-CeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCC----eEEeecCCCCCCeeEecCCC--
Q 002208 125 AAALMAGLAPKTKLLRD-GKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTKNPG-- 197 (953)
Q Consensus 125 ~~~l~~~~~~~~~V~Rd-G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----l~Vdes~LTGEs~pv~K~~g-- 197 (953)
.+++ +.++++|+|| |++++++|+||+|||+|.|++||.||||++|+++++ ++||||+|||||+|+.|++.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 4578999997 899999999999999999999999999999998654 99999999999999999641
Q ss_pred ----------------------------------------------Ccccccceeee-ceEEEEEEEecchhHHHHHHHh
Q 002208 198 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (953)
Q Consensus 198 ----------------------------------------------~~v~~Gs~v~~-G~~~~vVi~tG~~T~~gki~~l 230 (953)
|++|+||.+++ |.+.|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46889999999 899999999999999876421
Q ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cch---------------HHHHHHHHHHHHhhccc
Q 002208 231 VDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQH----RKY---------------RDGIDNLLVLLIGGIPI 291 (953)
Q Consensus 231 ~~~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~llv~~iP~ 291 (953)
....+.+++++.++++..+++++.++.+++..++...... ..| ...+..+++++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2234779999999999876554433323332222211111 011 12566788999999999
Q ss_pred chHHHHHHHHHHHH------HHHhhC----CccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccC-----
Q 002208 292 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKG----- 356 (953)
Q Consensus 292 aLp~~~~i~~~~~~------~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----- 356 (953)
+||+++++++++++ .+|.++ ++++|+++++|+||+|++||+|||||||+|+|+++++.+.....+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 599999999999999999999999999999999999875311000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccC-------c-------CCChH
Q 002208 357 --------V--------------------E----------------KDHVMLLAARASRT-------E-------NQDAI 378 (953)
Q Consensus 357 --------~--------------------~----------------~~~~l~~a~~~~~~-------~-------~~~~~ 378 (953)
. + ..+++..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01233333434321 1 25899
Q ss_pred HHHHHHhcCCh---------h---------hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc-
Q 002208 379 DAAIVGMLADP---------K---------EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA- 439 (953)
Q Consensus 379 ~~ai~~~~~~~---------~---------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 439 (953)
|.|++.++... + .....|++++.+||+|+|||||+++++++|++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999876321 1 0124588899999999999999999998888899999999999999985
Q ss_pred cHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-------------------------CCCCCCcEEEEEeecCCCCC
Q 002208 440 KEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-------------------------ESPGGPWQFVGLLPLFDPPR 494 (953)
Q Consensus 440 ~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lR 494 (953)
+++.++++.+++++|+++|+|||++|+|.+++++. +.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999875421 34689999999999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-----------------------------------
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA----------------------------------- 539 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~----------------------------------- 539 (953)
+|++++|+.|++|||+|||+|||+++||.+||++||+.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999976432110
Q ss_pred ----cccCcccccccCc---hhHHHHHHhcC--cEeecCHHHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 540 ----SLLGQDKDASIAA---LPVEELIEKAD--GFAGVFPEHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 540 ----~l~~~~~~~~~~~---~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
++.|...+..+++ ..+.+++..++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1222222111111 12334555555 99999999999999999998 99999999999999999999999998
Q ss_pred -cCchHHHhhccCEeecCCCchhHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CccHHHHHHH
Q 002208 610 -ADATDAARGASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKF----DFSPFMVLII 683 (953)
Q Consensus 610 -g~~t~~a~~aaDivl~~~~~~~i~~ai-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~----~~~~~~il~i 683 (953)
|.....|+.+||+++.+ |..+..++ .|||++|+|+++++.|.+++|+.+++..+++.++..+ ++.+++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 43223466799999975 88999887 8999999999999999999999888888777665433 5788899999
Q ss_pred HHhhhhc-hhcccc-CCCCCC----CCCC--------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCccc
Q 002208 684 AILNDGT-IMTISK-DRVKPS----PLPD--------SWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVRA 749 (953)
Q Consensus 684 ~l~~~~~-~~~l~~-d~~~~~----~~p~--------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 749 (953)
|++.+.+ +++++. |+..+. ..|. .....+.|..+++.|++++++++++.++.+...... ..|
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g--- 947 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG--- 947 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC---
Confidence 9999887 477764 333211 1221 111233455566789999998886655554321111 112
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHH-HHhh-c---ccccccccchHhHH
Q 002208 750 IRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLI-AVYA-N---WGFARIKGVGWGWA 824 (953)
Q Consensus 750 ~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~---~~~~~~~~~~~~~~ 824 (953)
...+.....+++|+.+++..++.++ ..++.|+|..... +++++++ .++..++ ..+. . ++.......++.+|
T Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~wt~~~~~~--~~~S~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~ 1023 (1057)
T TIGR01652 948 SLDDFSSVGVIVFTALVVIVNLKIA-LEINRWNWISLIT--IWGSILV-WLIFVIVYSSIFPSPAFYKAAPRVMGTFGFW 1023 (1057)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHH-HHHhHhHHHHHHH--HHHHHHH-HHHHHHHHHhhcccccHHHHHHHHHccHHHH
Confidence 1123455667778777777766542 2333454432221 1122211 1111111 1010 0 00011111245566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhcC
Q 002208 825 GVIWLYSIVFYVPLDVMKFAIRYILS 850 (953)
Q Consensus 825 ~~~~~~~~~~~~~~~~~K~~~r~~~~ 850 (953)
+.+++..++.++|+.++|++.|.+.|
T Consensus 1024 l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 1024 LVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 67677888888999999998777764
No 17
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.9e-98 Score=939.49 Aligned_cols=784 Identities=16% Similarity=0.169 Sum_probs=571.0
Q ss_pred HhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 002208 47 QIFGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAG 122 (953)
Q Consensus 47 ~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~ 122 (953)
.+|..|.+.+.||++| +.+++||..+.+++|+++++++++.. ......+...+++++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~--~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ--LAVFGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCC--cccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999875 67889999999999999999998843 22233556778888899999999999999999
Q ss_pred hHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC----CeEEeecCCCCCCeeEecCCC-
Q 002208 123 NAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD----PLKVDQSALTGESLPVTKNPG- 197 (953)
Q Consensus 123 ~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~~g- 197 (953)
++.++.+ +..++|+|+|++++++|++|+|||+|.|++||.||||++|++++ .++||||+|||||+|+.|.++
T Consensus 163 k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 9987753 56899999999999999999999999999999999999999843 389999999999999999752
Q ss_pred --------------------------------------------Ccccccceeeec-eEEEEEEEecchhHHHHHHHhhh
Q 002208 198 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (953)
Q Consensus 198 --------------------------------------------~~v~~Gs~v~~G-~~~~vVi~tG~~T~~gki~~l~~ 232 (953)
+.+++||.+++. .++|+|++||.+|+..+ +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 346677777776 49999999999998432 1111
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc-c---------------------ch-------HHHHHHH
Q 002208 233 STNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVM--YPIQH-R---------------------KY-------RDGIDNL 281 (953)
Q Consensus 233 ~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~--~~~~~-~---------------------~~-------~~~~~~~ 281 (953)
...+.+++++.+|++..+++++.++.+++..++. |.... . ++ ...+...
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2247899999999988765443333222222221 11100 0 00 1112334
Q ss_pred HHHHHhhcccchHHHHHHHHHHHHHHHhhCC----------ccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeee
Q 002208 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE 351 (953)
Q Consensus 282 l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~----------ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 351 (953)
++++..+||++|++.+++++..++..+.++. +.+|+.+.+|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5677799999999999999988898888765 789999999999999999999999999999999998763
Q ss_pred hhccC-----------------------------------------CC-h-----HHHHHHHHHhccC------------
Q 002208 352 VFAKG-----------------------------------------VE-K-----DHVMLLAARASRT------------ 372 (953)
Q Consensus 352 ~~~~~-----------------------------------------~~-~-----~~~l~~a~~~~~~------------ 372 (953)
....+ .+ + .+++...+.|+..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 00 0 1233333333321
Q ss_pred ------cCCChHHHHHHHhcCCh----------------hhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcH
Q 002208 373 ------ENQDAIDAAIVGMLADP----------------KEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAP 430 (953)
Q Consensus 373 ------~~~~~~~~ai~~~~~~~----------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 430 (953)
...+|.|.|++.++.+. ...+..|++++.+||+|+|||||+++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 11379999999876421 22456789999999999999999999988888999999999
Q ss_pred HHHHHHhhcc--HHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC-------------------------CCCCCCcEE
Q 002208 431 EQILALCNAK--EDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK-------------------------ESPGGPWQF 483 (953)
Q Consensus 431 e~il~~~~~~--~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~l 483 (953)
+.|+++|+.. ++.++++++++++|+++|+|||++|||.++++++ +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3567788999999999999999999999975422 346899999
Q ss_pred EEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc----------------------
Q 002208 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL---------------------- 541 (953)
Q Consensus 484 lG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l---------------------- 541 (953)
+|+++++||||++++++|++|+++||+|||+|||+.+||++||++|||.++......+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997653211111
Q ss_pred -------------------------cCcccccccC---chhHHHHHHhcC--cEeecCHHHHHHHHHHhccc-CCEEEEE
Q 002208 542 -------------------------LGQDKDASIA---ALPVEELIEKAD--GFAGVFPEHKYEIVKKLQER-KHICGMT 590 (953)
Q Consensus 542 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--vfar~~P~~K~~iV~~lq~~-g~~V~~~ 590 (953)
.|...+..++ .+.+.++..+++ ||||++|+||+++|+.+|+. +++|+|+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1111110011 123445555555 79999999999999999987 5899999
Q ss_pred cCCccCHHhhhhCCeeEEe-c-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 591 GDGVNDAPALKKADIGIAV-A-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIA 668 (953)
Q Consensus 591 GDG~ND~paLk~AdVGIam-g-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~ 668 (953)
|||+||+||||+|||||++ | +|.+|++ |||+++.++++..-+.++ |||+.|+|+.+.+.|.+++|+.+++..+++.
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 5 5666555 999999988876555444 9999999999999999999999999999988
Q ss_pred HhhcCC----ccHHHHHHHHHhhhhc-hhcc-ccCCCCCC----CCC---------CccchHHHHHHHHHHHHHHHHHHH
Q 002208 669 LIWKFD----FSPFMVLIIAILNDGT-IMTI-SKDRVKPS----PLP---------DSWKLKEIFATGVVLGGYLALMTV 729 (953)
Q Consensus 669 ~~~~~~----~~~~~il~i~l~~~~~-~~~l-~~d~~~~~----~~p---------~~~~~~~~~~~~~~~G~~~~~~~~ 729 (953)
++.+|. +.++.+.++|++...+ ++.+ .+|+.-+. ..| ..++ .+.|+.+++.|++++++.|
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n-~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN-SKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccC-HHHHHHHHHHHHHHHHHHH
Confidence 887764 5567777777766655 4666 45554332 112 2233 3456666778999999988
Q ss_pred HHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhh
Q 002208 730 IFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVYA 809 (953)
Q Consensus 730 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 809 (953)
++.++.+..... +. ....+++++.++++.++.++ ..+++|.|..... +++++++ .++..++..+.
T Consensus 1035 f~~~~~~~~~~~----~~-------~~~~~~~~~~~v~~vnl~i~-~~~~~wt~~~~~~--i~~Si~~-~~i~~~~~~~~ 1099 (1178)
T PLN03190 1035 FVPLFAYWASTI----DG-------SSIGDLWTLAVVILVNLHLA-MDIIRWNWITHAA--IWGSIVA-TFICVIVIDAI 1099 (1178)
T ss_pred HHHHHHhcCCCc----Cc-------eeEhHhhhhHHHHHHHHHHH-HHHhhhhHHHHHH--HHHHHHH-HHHHHHHHHhc
Confidence 776665532211 10 01123444455555554332 3333454433221 2222221 11111111100
Q ss_pred c-----ccccccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchhHHHh
Q 002208 810 N-----WGFARIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKAWLNL 857 (953)
Q Consensus 810 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~ 857 (953)
+ +.+..+ ...+.+|+.+++..++.++|+.++|++.|.+.|. .++..
T Consensus 1100 ~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~-~~~~~ 1150 (1178)
T PLN03190 1100 PTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPC-DVQIA 1150 (1178)
T ss_pred ccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHH
Confidence 0 111111 1235566676788888889999999988877754 44443
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.1e-96 Score=873.28 Aligned_cols=545 Identities=23% Similarity=0.364 Sum_probs=454.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCc--hhhHHHHHHHHHHHHHHHHHH----HHHhhhHHHHhhcCCCC-eEE
Q 002208 67 GFMWNPLSWVMEAAAVMAIALANGEG--KPPD--WQDFVGIVCLLVINSTISFIE----ENNAGNAAAALMAGLAP-KTK 137 (953)
Q Consensus 67 ~~~~~~~~~il~~~ail~~~l~~~~~--~~~~--~~~~~~i~~~~~i~~~i~~~~----e~~~~~~~~~l~~~~~~-~~~ 137 (953)
.+++||+.|+++++++++++++.... .... +...+.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 47899999999999999998752100 0111 245667778888888888777 78999999999998886 786
Q ss_pred -EEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC---CcccccceeeeceEEE
Q 002208 138 -LLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG---DEVFSGSTCKQGEIEA 213 (953)
Q Consensus 138 -V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~ 213 (953)
|.|||++++|++++|+|||+|.|++||+|||||++++| ...||||+|||||.||.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 569999999999999999999 8899999999999999
Q ss_pred EEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHhhccc
Q 002208 214 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPI-QHRKYRDGIDNLLVLLIGGIPI 291 (953)
Q Consensus 214 vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~iP~ 291 (953)
+|+++|.+|++||+++++++++ +++|+|..+..+...+.++ ++ +++ +..+.+ ...++...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii-~l-~~~--~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTII-FL-VVI--LTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHH-HH-HHH--HHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998764 7889987665543322211 11 111 111111 1123445667778888999999
Q ss_pred chHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhcc
Q 002208 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASR 371 (953)
Q Consensus 292 aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 371 (953)
+||..++++.+.|+.||+|+|+++|+++++|+||++|++|||||||||+|++.+.+... ..+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998777665431 234556667777766665
Q ss_pred CcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccH-HHHHHHHHH
Q 002208 372 TENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKE-DLKKKVHAI 450 (953)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~ 450 (953)
.. .||++.|++.++..... .......+++||++++|+|++.+ +|+ .+.||||+.++++|+... ..+..+++.
T Consensus 340 ~s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 AD-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred CC-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 44 49999999987642210 00112245689999999999864 343 466999999999997421 223456677
Q ss_pred HHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhC
Q 002208 451 IDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (953)
Q Consensus 451 ~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (953)
.++++++|+|+++++. +++++|+++++||||||++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 348999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 531 MGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 531 i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
++ ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||
T Consensus 480 I~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 95 269999999999999999999999999999999999999999999999
Q ss_pred CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 611 DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIAL 669 (953)
Q Consensus 611 ~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (953)
+|+|+||++||+||++|||++|++++++||++|.|+++++.|.++.|+...+..+...|
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987766555443
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=9.6e-93 Score=842.66 Aligned_cols=537 Identities=25% Similarity=0.328 Sum_probs=451.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcC----CC---CCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCC-eEE
Q 002208 66 LGFMWNPLSWVMEAAAVMAIALANG----EG---KPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAP-KTK 137 (953)
Q Consensus 66 l~~~~~~~~~il~~~ail~~~l~~~----~~---~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~~~ 137 (953)
..||+||+.++++++++++++++.. .+ ....|...+.+++.+++...++.++|+|+++++++|++..+. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3589999999999999999987521 11 112344444555556666777789999999999999998775 799
Q ss_pred EEECCe-EEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCc---ccccceeeeceEEE
Q 002208 138 LLRDGK-WSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDE---VFSGSTCKQGEIEA 213 (953)
Q Consensus 138 V~RdG~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~~~ 213 (953)
|+|||+ +++|++++|+|||+|.|++||.|||||++++| .+.||||+|||||.||.|++|+. +|+||.|.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999998 99999999999999999999999999999999 58999999999999999999998 99999999999999
Q ss_pred EEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccc
Q 002208 214 VVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIA 292 (953)
Q Consensus 214 vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~a 292 (953)
+|+++|.+|++||+.++++++ .+++|+|..++.+...+...+++.++..+.+.+ +.+.. .++..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~-~~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA-YSGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999887 468899987777655433222221211111111 11222 36788899999999999
Q ss_pred hHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccC
Q 002208 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRT 372 (953)
Q Consensus 293 Lp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~ 372 (953)
|+..++.+...|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|++.+... ..+.+.++++..++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999987652 2356677788877777665
Q ss_pred cCCChHHHHHHHhcCCh---hhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhcc-HHHHHHHH
Q 002208 373 ENQDAIDAAIVGMLADP---KEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-EDLKKKVH 448 (953)
Q Consensus 373 ~~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 448 (953)
.+ ||.+.|++.++... ......++..+++||++.++++++.+ +| ..+.||++|.+++.|+.. ...+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 54 89999998876431 11111245677899999988887654 34 478999999999999642 23456788
Q ss_pred HHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH
Q 002208 449 AIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (953)
Q Consensus 449 ~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (953)
+.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999964 389999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 529 LGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 529 lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
+|++ ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 2699999999999999999999999999999999999999999999
Q ss_pred ecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 002208 609 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (953)
Q Consensus 609 mg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni 658 (953)
||+|||+||++||+||+||||++|++++++||++.-.--....|++..-+
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999999998554555666665444
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=3.7e-88 Score=801.47 Aligned_cols=541 Identities=24% Similarity=0.310 Sum_probs=453.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcC---C---CCCCchhhH---HHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCC-e
Q 002208 66 LGFMWNPLSWVMEAAAVMAIALANG---E---GKPPDWQDF---VGIVCLLVINSTISFIEENNAGNAAAALMAGLAP-K 135 (953)
Q Consensus 66 l~~~~~~~~~il~~~ail~~~l~~~---~---~~~~~~~~~---~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~ 135 (953)
..||.||+.++++++++++++++.. . +....|++. +.+++.+++...++.++|+|++++.++|++..++ .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3578999999999999999987431 1 111246654 3344456677778889999999999999998877 4
Q ss_pred EEEEE-CCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCc---ccccceeeeceE
Q 002208 136 TKLLR-DGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDE---VFSGSTCKQGEI 211 (953)
Q Consensus 136 ~~V~R-dG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~ 211 (953)
++|+| ||++++|++++|+|||+|.|++||+|||||++++| .+.||||+|||||.||.|++|+. +|+||.|.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 99999999999999999999999999999999999 68999999999999999999985 999999999999
Q ss_pred EEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcc
Q 002208 212 EAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIP 290 (953)
Q Consensus 212 ~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP 290 (953)
.++|+++|.+|++||+.++++++ .+++|+|..++.+..++.+.+++.++. +..+..+. .....+...+++++++||
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP 262 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIP 262 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCc
Confidence 99999999999999999999876 467999988777665443222221111 11111111 122356777899999999
Q ss_pred cchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhc
Q 002208 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARAS 370 (953)
Q Consensus 291 ~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~ 370 (953)
|+|+...+.+...|+.||+|+|+++|++.++|+||++|+||||||||||+|+|++.+... ..+.+.++++..++.++
T Consensus 263 ~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~ 339 (675)
T TIGR01497 263 TTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLAS 339 (675)
T ss_pred hhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhc
Confidence 988877777777899999999999999999999999999999999999999999988652 23567778888887776
Q ss_pred cCcCCChHHHHHHHhcCChhh--hhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhcc-HHHHHHH
Q 002208 371 RTENQDAIDAAIVGMLADPKE--ARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK-EDLKKKV 447 (953)
Q Consensus 371 ~~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~ 447 (953)
... +||.+.|++.++..... ....++..++.||++.++++++.+. +| ..+.||+||.+++.|... ...+.++
T Consensus 340 ~~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~ 414 (675)
T TIGR01497 340 LAD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDL 414 (675)
T ss_pred CCC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHH
Confidence 654 48999999887643211 1112345678999999877765443 45 468999999999988532 2334667
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 527 (953)
++.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 888899999999999999753 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 528 RLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 528 ~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
++|++ +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||
T Consensus 482 ~lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 482 EAGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred HcCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 99995 269999999999999999999999999999999999999999999
Q ss_pred EecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 002208 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (953)
Q Consensus 608 amg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~ 661 (953)
||++|+++|+++||++++++||++|++++++||+++-+....+.|+++.++.-.
T Consensus 532 Am~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred EeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 999999999999999999999999999999999999999999999888777543
No 21
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-87 Score=771.32 Aligned_cols=676 Identities=24% Similarity=0.330 Sum_probs=511.2
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 002208 25 EVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIV 104 (953)
Q Consensus 25 ~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~ 104 (953)
+..+......+||+.+++.+|+..||+|.+..+..+.+..++++..+|+ +++.+..+..|... .+++.+..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 4444445557899999999999999999999999999999999999999 67777777766643 2445556677
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcC-CCcccccEEEEecCCeEEeec
Q 002208 105 CLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKL-GDIIPADARLLEGDPLKVDQS 183 (953)
Q Consensus 105 ~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~-Gd~IPaD~~ll~g~~l~Vdes 183 (953)
++.+.+...+.+|.++..+.+..+- .....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 7778888889999998888877744 34578999999999999999999999999998 8899999999999 6889999
Q ss_pred CCCCCCeeEecCCC-------------------Ccccccceeee------ceEEEEEEEecchhHHHHHHHhhhccCCCC
Q 002208 184 ALTGESLPVTKNPG-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 238 (953)
Q Consensus 184 ~LTGEs~pv~K~~g-------------------~~v~~Gs~v~~------G~~~~vVi~tG~~T~~gki~~l~~~~~~~~ 238 (953)
+|||||.||.|.|- +.+|.||.+.+ |.+.++|++||.+|..|++.+.+-.++ +.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-PV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-Cc
Confidence 99999999999873 46899999986 558999999999999998777665443 33
Q ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccc
Q 002208 239 HFQKVLTAIGNFC-ICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (953)
Q Consensus 239 ~lq~~~~~i~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~ 317 (953)
+++-.-+.+..+. +..+++..++..++.+...+.+....+..++.++.+.+|+|||.++++....+..||.|+|++|-+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 4443333322111 111111112222222334567888889999999999999999999999999999999999999999
Q ss_pred hhHHHhhcCceEEecCCCCCCCCCceEEEEeeeeh---hcc---------------------CCCh--HHHHHHHHHhcc
Q 002208 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV---FAK---------------------GVEK--DHVMLLAARASR 371 (953)
Q Consensus 318 ~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~~~---------------------~~~~--~~~l~~a~~~~~ 371 (953)
++.+...|++|++|||||||||++.+.+-...... ... ...+ .....+|.+++-
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 99999999999999999999999999886544210 000 0001 112222222221
Q ss_pred -----CcCCChHHHHHHHhcC------------------------Chhh--------hh-cCcceEEeecCCCCCceEEE
Q 002208 372 -----TENQDAIDAAIVGMLA------------------------DPKE--------AR-AGIREVHFFPFNPVDKRTAL 413 (953)
Q Consensus 372 -----~~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~l~~~pF~s~~kr~sv 413 (953)
.-.+||+|..+.+.-+ +|.+ .. ..+.+++.+||+|.-+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 1124666544432110 1110 01 14778999999999999999
Q ss_pred EEEcC-CCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCC--------CCCCCCCCcEEE
Q 002208 414 TYIDS-DGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPER--------TKESPGGPWQFV 484 (953)
Q Consensus 414 ~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~--------~~~~~e~~l~ll 484 (953)
++.++ +.+...|+|||||.|.++|+. +.+++.+++.++.|+.+|+|++|+|+|+++.. .++..|++|+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99875 467899999999999999984 57889999999999999999999999999866 367889999999
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCC----------c--------------c
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS----------A--------------S 540 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~----------~--------------~ 540 (953)
|++.||+++|++++.+|++|++|.|+++|+||||..||..+||+|||....... . .
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 999999999999999999999999999999999999999999999996532100 0 0
Q ss_pred ccC----------cc----------ccccc-----------CchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEE
Q 002208 541 LLG----------QD----------KDASI-----------AALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGM 589 (953)
Q Consensus 541 l~~----------~~----------~~~~~-----------~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~ 589 (953)
..+ .. ..-.+ ..+.+++++.+.+|||||+|.||.++|+.||+.|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 000 00 00011 123356677889999999999999999999999999999
Q ss_pred EcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 590 TGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIAL 669 (953)
Q Consensus 590 ~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 669 (953)
||||+||+.|||+|||||+++++. |.-||-+.=.-++++.+++.|++||...-.--..+.|...+.+..+...+ ++
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~L 933 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FL 933 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--ee
Confidence 999999999999999999998532 33366666666799999999999999876666666666555443322221 12
Q ss_pred h-hcCCccHHHHHHHHHhhhhc-hhcccc----CCCCCCCCCCccchHHHHH
Q 002208 670 I-WKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPLPDSWKLKEIFA 715 (953)
Q Consensus 670 ~-~~~~~~~~~il~i~l~~~~~-~~~l~~----d~~~~~~~p~~~~~~~~~~ 715 (953)
+ -+..++-+|.+++.++-..+ +..++. ++..+.++|.+.-.++++.
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~ 985 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILV 985 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhh
Confidence 2 24567888888888876544 344443 3334455555544444433
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3e-89 Score=829.78 Aligned_cols=788 Identities=18% Similarity=0.222 Sum_probs=582.1
Q ss_pred HHHhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002208 45 RLQIFGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENN 120 (953)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~ 120 (953)
+...|-.|.+.+.||+.+ +.+++||.++.|++|++.++++++. .++...|...+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999999864 7889999999999999999999985 335567888889999999999999999999
Q ss_pred hhhHHHHhhcCCCCeEEEEECCe-EEEEEccCcCCCcEEEEcCCCcccccEEEEecC----CeEEeecCCCCCCeeEecC
Q 002208 121 AGNAAAALMAGLAPKTKLLRDGK-WSEEEAAILVPGDIISIKLGDIIPADARLLEGD----PLKVDQSALTGESLPVTKN 195 (953)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~RdG~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~l~Vdes~LTGEs~pv~K~ 195 (953)
+++....++ ..++.|.|++. +++..|++|++||+|.+..+|.+|||.+|++++ -|+|++++|+||++.+.|+
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999887654 56889998644 899999999999999999999999999999764 3999999999999999885
Q ss_pred C-----------------------------------------------CCcccccceeeece-EEEEEEEecchhHHHHH
Q 002208 196 P-----------------------------------------------GDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (953)
Q Consensus 196 ~-----------------------------------------------g~~v~~Gs~v~~G~-~~~vVi~tG~~T~~gki 227 (953)
. .+++++|+++++++ ++|+|+.||.+|++++.
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 4 13577899999886 89999999999988764
Q ss_pred HHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------------c-----chHHHHHHHHHHHHhhc
Q 002208 228 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQH-------------R-----KYRDGIDNLLVLLIGGI 289 (953)
Q Consensus 228 ~~l~~~~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~-------------~-----~~~~~~~~~l~llv~~i 289 (953)
... ...+++.+++.++.+...+.+..+..+++..+....... . .....+..++.++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 332 334778889988887655443333322222221111100 0 01123556778889999
Q ss_pred ccchHHHHHHHHHHHHHHHh----------hCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCCh
Q 002208 290 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEK 359 (953)
Q Consensus 290 P~aLp~~~~i~~~~~~~~l~----------~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 359 (953)
|++|++.+++....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.++...+|...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999885443 34788999999999999999999999999999999999987533322110
Q ss_pred --------------------------------------------HHHHHHHHHhc-cC------------cCCChHHHHH
Q 002208 360 --------------------------------------------DHVMLLAARAS-RT------------ENQDAIDAAI 382 (953)
Q Consensus 360 --------------------------------------------~~~l~~a~~~~-~~------------~~~~~~~~ai 382 (953)
.+.....+.|. .. +.+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 01122222222 11 1135788888
Q ss_pred HHhcCChh----------------hhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhh-ccHHHHH
Q 002208 383 VGMLADPK----------------EARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCN-AKEDLKK 445 (953)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 445 (953)
+..+.+.. .....|+.++.+||+|.||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 87663211 024579999999999999999999999999999999999999999998 4566788
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeccCCCCC-------------------------CCCCCCcEEEEEeecCCCCCCCHHHH
Q 002208 446 KVHAIIDKYAERGLRSLAVARQEVPERTK-------------------------ESPGGPWQFVGLLPLFDPPRHDSAET 500 (953)
Q Consensus 446 ~~~~~~~~~a~~GlR~L~vA~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lR~~v~~~ 500 (953)
+..+++++||.+|+||||+|||+++++++ +.+|+||+++|.+++||++|++|||+
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88999999999999999999999987652 46799999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-------------------------------------
Q 002208 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG------------------------------------- 543 (953)
Q Consensus 501 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~------------------------------------- 543 (953)
|+.|++||||+||+|||+.+||.+||.+|++..+.+....+..
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 9999999999999999999999999999999775432211111
Q ss_pred --------cccccccCchhHHHHH-----HhcCcEeecCHHHHHHHHHHhcc-cCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 544 --------QDKDASIAALPVEELI-----EKADGFAGVFPEHKYEIVKKLQE-RKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 544 --------~~~~~~~~~~~~~~~~-----~~~~vfar~~P~~K~~iV~~lq~-~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
......+++++...++ .++.+|||++|.||+.+|+..++ .+.+++++|||+||++|++.|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 1111111221111222 24568999999999999999974 489999999999999999999999999
Q ss_pred -c-CchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----ccHHHHHHH
Q 002208 610 -A-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFD----FSPFMVLII 683 (953)
Q Consensus 610 -g-~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~----~~~~~il~i 683 (953)
| +|.+|+. +||+.+.+++|.....++ ||||.|.|+.+++.|.+++|+...+..+++.++.+|. +.++++.++
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 5666555 999999999998887666 9999999999999999999999999999999888764 455566666
Q ss_pred HHhhhhc-hhccccCCCCCC--------------CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccCcc
Q 002208 684 AILNDGT-IMTISKDRVKPS--------------PLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPDKFGVR 748 (953)
Q Consensus 684 ~l~~~~~-~~~l~~d~~~~~--------------~~p~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~ 748 (953)
|++...+ ++.+|.-..+.+ +....++. +.|+.+++.|+++++++|++++..+... .....|
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~-~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G-- 973 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNW-KRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNG-- 973 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccch-HHHHHHHHHHHHhheeeeeeeHhhheee-eeccCC--
Confidence 6655544 567754322221 11123333 4555666779999999998877776432 111112
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccChhHHHHHHHHHHHHHHHHHHHhhc-----------ccccccc
Q 002208 749 AIRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLERPGLLLVTAFVIAQLVATLIAVYAN-----------WGFARIK 817 (953)
Q Consensus 749 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 817 (953)
...+.....+.+|+.+++.....+ ..-+.+|.|..+. .+.+.++..++..+ +|.. .+++...
T Consensus 974 -~~~d~~~~G~~~~T~~Vivv~~~i-aL~~~ywT~i~~i---~i~gSi~~~f~f~~--iy~~~~~~~~~~~~~~~~~~~~ 1046 (1151)
T KOG0206|consen 974 -LTADYWTLGTTVFTIIVIVVNLKI-ALETSYWTWINHI---VIWGSILLWFVFLF--IYSELTPAISTPDPFYGVAEHL 1046 (1151)
T ss_pred -CcCChhhccceEEEEEEEEEEeee-eeeehheeHHHHH---HHHHHHHHHHHHHH--HHhccccccCCCccHHHHHHHH
Confidence 111222333445554444444331 2222335443332 22222222222222 2211 1112223
Q ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCchh
Q 002208 818 GVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGKA 853 (953)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~ 853 (953)
.....+|+++++..+++++|+-.+|.+.+.++|...
T Consensus 1047 ~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~ 1082 (1151)
T KOG0206|consen 1047 LSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDH 1082 (1151)
T ss_pred hcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHH
Confidence 335568888889999999999999999888876553
No 23
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-84 Score=768.92 Aligned_cols=502 Identities=28% Similarity=0.406 Sum_probs=436.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEE-CCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC
Q 002208 98 QDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLR-DGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 176 (953)
Q Consensus 98 ~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R-dG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~ 176 (953)
.++.++++++++...++.+-..|+.+++++|+++.|.++++++ ||++++||.++|+|||+|.|+|||+||+||++++|
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G- 253 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSG- 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeC-
Confidence 6677788888888888888888999999999999999997776 56699999999999999999999999999999999
Q ss_pred CeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHH
Q 002208 177 PLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSI 255 (953)
Q Consensus 177 ~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i 255 (953)
...||||+|||||.||.|.+||.||+||.+.+|..+..|+++|.+|.++++.++++++ .++++.|+..++++.+++..+
T Consensus 254 ~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 254 SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 4689999999999999999999999999999999999999999999999999999988 488999999999999887755
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCC
Q 002208 256 AVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335 (953)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKT 335 (953)
+++.++.++++++....+|..++..++++|+++|||+|.+++|++...|..+.+++|+++|+.+++|.++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 55455545544444446888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEE
Q 002208 336 GTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTY 415 (953)
Q Consensus 336 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (953)
||||+|+++|.+... . .+ ++++++.+++..+..++ ||+..|+++++.+.. ....+..+.+|- +.-.. .
T Consensus 414 GTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G---~Gv~~-~- 481 (713)
T COG2217 414 GTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG---RGVEA-E- 481 (713)
T ss_pred CCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc---CcEEE-E-
Confidence 999999999998763 2 23 78889999888776665 999999999765322 111222233331 11111 1
Q ss_pred EcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCC
Q 002208 416 IDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRH 495 (953)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~ 495 (953)
-+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++... +++|+++++|++||
T Consensus 482 --v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~ 540 (713)
T COG2217 482 --VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRP 540 (713)
T ss_pred --ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCCh
Confidence 145 4567799988754211 1111 5566778889999999998876 89999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHH
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYE 575 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~ 575 (953)
|++++|++||+.|+++.|+||||..+|.++|+++||+ +++|.+.||||.+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~ 590 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAE 590 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHH
Confidence 9999999999999999999999999999999999995 3699999999999
Q ss_pred HHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHH
Q 002208 576 IVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (953)
Q Consensus 576 iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~ 655 (953)
+|+.||++|++|+|+|||+||+|||++||||||||.|+|+|+++||++|+++++..++.+++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002208 656 ITIRIVFG 663 (953)
Q Consensus 656 ~ni~~~~~ 663 (953)
+|...+..
T Consensus 671 yn~~~ipl 678 (713)
T COG2217 671 YNAIAIPL 678 (713)
T ss_pred HHHHHHHH
Confidence 99865443
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=5.9e-80 Score=753.78 Aligned_cols=498 Identities=27% Similarity=0.371 Sum_probs=436.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec
Q 002208 96 DWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG 175 (953)
Q Consensus 96 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 175 (953)
.|.++++++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002208 176 DPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 254 (953)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~ 254 (953)
...||||+|||||.|+.|++||.||+||.+.+|.+++.|+++|.+|.+||+.++++++ .+++|+|+.+++++.++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999887 47899999999999987766
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCC
Q 002208 255 IAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (953)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 334 (953)
+++..++.+++++.+.+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 65544444444444456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEE-
Q 002208 335 TGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTAL- 413 (953)
Q Consensus 335 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv- 413 (953)
|||||+|+|+|.+... ..+.++++++.+++..+.. ..||++.|+++++... +. .+||.++.+.+.-
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988652 2346677888877655443 4599999999876421 11 2467666665531
Q ss_pred EEE-cCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCC
Q 002208 414 TYI-DSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDP 492 (953)
Q Consensus 414 ~~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~ 492 (953)
-++ ..+|+. +..|+++.+.+ ..+.+.+.++++.++|+|++++|++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 122 224543 44689988754 12334455678899999999999854 89999999999
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+|||++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 267789999
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~ 652 (953)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|++.++++||++++++++..++.+++.||++++||++++.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002208 653 AVSITIRIV 661 (953)
Q Consensus 653 ~l~~ni~~~ 661 (953)
++.+|+..+
T Consensus 697 a~~~n~~~i 705 (741)
T PRK11033 697 ALGLKAIFL 705 (741)
T ss_pred HHHHHHHHH
Confidence 999997543
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=5.8e-78 Score=712.93 Aligned_cols=474 Identities=37% Similarity=0.541 Sum_probs=417.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhc--CCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEe
Q 002208 104 VCLLVINSTISFIEENNAGNAAAALMA--GLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVD 181 (953)
Q Consensus 104 ~~~~~i~~~i~~~~e~~~~~~~~~l~~--~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vd 181 (953)
+++++++..++.+++++++++.+.|++ ..+++++|+|+| +++|++++|+|||+|.+++||.|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345677888999999999999999998 778899999999 99999999999999999999999999999999 78999
Q ss_pred ecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002208 182 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGM 259 (953)
Q Consensus 182 es~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~-~~~~~~i~~~~ 259 (953)
||+|||||.|+.|.+||.+|+||.+.+|+..+.|+.+|.+|..+++..++.+.. .++++++..+++. .++++.+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 4788899999998 55444333323
Q ss_pred HHHHHHHHhcccc--chHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCC
Q 002208 260 LVEIIVMYPIQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (953)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGT 337 (953)
++.+++++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3322222222122 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEEEEEc
Q 002208 338 LTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYID 417 (953)
Q Consensus 338 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 417 (953)
||+|+|+|.++... . + ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987631 1 0 123459999999987642 123568999999999998875
Q ss_pred CCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCH
Q 002208 418 SDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDS 497 (953)
Q Consensus 418 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v 497 (953)
.++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 2334556888999999999876 7999999999999999
Q ss_pred HHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHH
Q 002208 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIV 577 (953)
Q Consensus 498 ~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV 577 (953)
+++|+.|+++|++++|+|||++.+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002208 578 KKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (953)
Q Consensus 578 ~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~n 657 (953)
+.+|+.|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002208 658 IRIVFGFM 665 (953)
Q Consensus 658 i~~~~~~~ 665 (953)
+..++..+
T Consensus 475 ~~~~~~a~ 482 (499)
T TIGR01494 475 LILIPLAA 482 (499)
T ss_pred HHHHHHHH
Confidence 87554443
No 26
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-79 Score=709.30 Aligned_cols=539 Identities=24% Similarity=0.339 Sum_probs=449.8
Q ss_pred Cchhh-HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCe-EEEEEccCcCCCcEEEEcCCCcccccEEE
Q 002208 95 PDWQD-FVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGK-WSEEEAAILVPGDIISIKLGDIIPADARL 172 (953)
Q Consensus 95 ~~~~~-~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~l 172 (953)
..++| ..+++.++.+...++.....++..++..|+...|.++.++.+|+ +++|+.+.|++||+|.|+||++||+||++
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 34444 44455566666666666677778888899998899999999997 89999999999999999999999999999
Q ss_pred EecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHH
Q 002208 173 LEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC 251 (953)
Q Consensus 173 l~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~ 251 (953)
++| +.+||||.+|||++||.|++|+.|.+||.+.+|.....++.+|.+|.+++|.+++++++ .+.|.|+.+|+++.++
T Consensus 418 v~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 999 57999999999999999999999999999999999999999999999999999999985 8899999999999987
Q ss_pred HHHHHHHHHHHHHHHHhccc----------cchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHH
Q 002208 252 ICSIAVGMLVEIIVMYPIQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAI 321 (953)
Q Consensus 252 ~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~i 321 (953)
...+++..++.+++|..+.. ..+..++..++++++++|||+|.++.|++.+.|....+++|+++|..+++
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 76665545554444443322 34556788889999999999999999999999999999999999999999
Q ss_pred HhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEe
Q 002208 322 EEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHF 401 (953)
Q Consensus 322 E~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~ 401 (953)
|.+.+++++.||||||||+|+++|.+... +....+..+++.+++..+.. ..||+..|++.++.............++
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~-SeHPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESG-SEHPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcC-CcCchHHHHHHHHHhcccccCcccccee
Confidence 99999999999999999999999998764 33335667777666654443 4499999999998654321111222233
Q ss_pred ecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCc
Q 002208 402 FPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPW 481 (953)
Q Consensus 402 ~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l 481 (953)
..|....+...+.+ +|+. ++-|.-+.+... .....++++..+++....|..+.+++...
T Consensus 654 ~~~pg~g~~~~~~~---~~~~--i~iGN~~~~~r~---~~~~~~~i~~~~~~~e~~g~tvv~v~vn~------------- 712 (951)
T KOG0207|consen 654 EYFPGEGIYVTVTV---DGNE--VLIGNKEWMSRN---GCSIPDDILDALTESERKGQTVVYVAVNG------------- 712 (951)
T ss_pred ecccCCCcccceEE---eeeE--EeechHHHHHhc---CCCCchhHHHhhhhHhhcCceEEEEEECC-------------
Confidence 33433332212221 3433 677888876642 22234557777888889999999999987
Q ss_pred EEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHh
Q 002208 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEK 561 (953)
Q Consensus 482 ~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 561 (953)
+++|++.++|++|||+..+|+.||++||++.|+||||..+|+++|+++|+.
T Consensus 713 ~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------------------- 763 (951)
T KOG0207|consen 713 QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------------------- 763 (951)
T ss_pred EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------------------
Confidence 899999999999999999999999999999999999999999999999974
Q ss_pred cCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHH
Q 002208 562 ADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRA 641 (953)
Q Consensus 562 ~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~ 641 (953)
+|+|.+.|+||.++||.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+||+.+++..++.++..+|+
T Consensus 764 -~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrk 842 (951)
T KOG0207|consen 764 -NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRK 842 (951)
T ss_pred -eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHhhh
Q 002208 642 IFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILND 688 (953)
Q Consensus 642 ~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~~ 688 (953)
+++|+|.++.|++.+|+..+....+.++.+++.++|++--....++.
T Consensus 843 t~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SS 889 (951)
T KOG0207|consen 843 TVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASS 889 (951)
T ss_pred HHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhh
Confidence 99999999999999998766666666666666688876555444443
No 27
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-78 Score=670.91 Aligned_cols=765 Identities=20% Similarity=0.258 Sum_probs=527.2
Q ss_pred HHHHhcCCCcccccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC-CchhhHHHHHHHHHHHHHHHHHHH
Q 002208 44 NRLQIFGPNKLEEKKESKI----LKFLGFMWNPLSWVMEAAAVMAIALANGEGKP-PDWQDFVGIVCLLVINSTISFIEE 118 (953)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~-~~~~~~~~i~~~~~i~~~i~~~~e 118 (953)
.++++|-+|.+...|++.+ ..+++||+-+++.++++.++.+++.....|.. .+|...+.++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5668899999999887753 56678888888899888888887743332222 244444445555555555555555
Q ss_pred HHhhhHHHHhhcCCCCeE-EEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecC----CeEEeecCCCCCCeeEe
Q 002208 119 NNAGNAAAALMAGLAPKT-KLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD----PLKVDQSALTGESLPVT 193 (953)
Q Consensus 119 ~~~~~~~~~l~~~~~~~~-~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~l~Vdes~LTGEs~pv~ 193 (953)
+++.+.. + ..+. +.-|||-..+ +++++++||+|.+..+++||||.++++.+ .+.|-+-.|+||+.-+.
T Consensus 154 ~~rd~~~---N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDREL---N---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhh---h---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 5554432 2 2333 3447776555 99999999999999999999999999643 58999999999998777
Q ss_pred cCC-----------------------------------------------CCcccccceeeeceEEEEEEEecchhHHHH
Q 002208 194 KNP-----------------------------------------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGK 226 (953)
Q Consensus 194 K~~-----------------------------------------------g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gk 226 (953)
|-| .|+++++|.+.+|.++|+|++||.+|+
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 644 257999999999999999999999996
Q ss_pred HHHhhhcc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 002208 227 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (953)
Q Consensus 227 i~~l~~~~---~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~ 303 (953)
..++.+ .+.+.++..+|.+.+.+.+.+++..+ +++.....+.+|...+.+++.++...||++|-+.+.++..+
T Consensus 304 --svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 304 --SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred --HHhccCCcccccceeeeecccHHHHHHHHHHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 333333 36677888888888876554443222 22233345678888899999999999999999999999999
Q ss_pred HHHHHhhC----CccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCC---------------------
Q 002208 304 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVE--------------------- 358 (953)
Q Consensus 304 ~~~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--------------------- 358 (953)
-++.+..+ |.++|..+.-|+||+++++.+|||||||+|+|.++++.....+.+.+
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 99888875 56799999999999999999999999999999999987642221100
Q ss_pred --------------hHHHHHHHHHhccCc---C--------CChHHHHHHHhc-----------------CChhhhhcCc
Q 002208 359 --------------KDHVMLLAARASRTE---N--------QDAIDAAIVGML-----------------ADPKEARAGI 396 (953)
Q Consensus 359 --------------~~~~l~~a~~~~~~~---~--------~~~~~~ai~~~~-----------------~~~~~~~~~~ 396 (953)
.+.+..+|.+++..+ + ..|.+.|+++.- .++......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 012233333332211 1 134444443321 0111123478
Q ss_pred ceEEeecCCCCCceEEEEEEcC-CCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCC
Q 002208 397 REVHFFPFNPVDKRTALTYIDS-DGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKE 475 (953)
Q Consensus 397 ~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~ 475 (953)
++++.+||+|+.|||.++++++ .|+...+.|||+.+|....+. .+++++...+||++|+|||.+|.|.+++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999986 688999999999998877664 35677778899999999999999999876531
Q ss_pred --------------------------CCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 476 --------------------------SPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 476 --------------------------~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
.+|.+|+++|+++.||++|+|++.+++.||+|||||||+|||+.+||+.||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 468999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccC----------------cc-cccccCch-----------hHHHHHH--hcCcEeecCHHHHHHHHHH
Q 002208 530 GMGTNMYPSASLLG----------------QD-KDASIAAL-----------PVEELIE--KADGFAGVFPEHKYEIVKK 579 (953)
Q Consensus 530 Gi~~~~~~~~~l~~----------------~~-~~~~~~~~-----------~~~~~~~--~~~vfar~~P~~K~~iV~~ 579 (953)
++.+......++.. .. ..-.++++ ++.++.. .+.++||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 98653211111100 00 00012222 3333332 3468999999999999999
Q ss_pred hccc-CCEEEEEcCCccCHHhhhhCCeeEEe-cCchHHHhhccCEeecCCCchhHHHHH-HHhHHHHHHHHHHHHHHHHH
Q 002208 580 LQER-KHICGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSI 656 (953)
Q Consensus 580 lq~~-g~~V~~~GDG~ND~paLk~AdVGIam-g~~t~~a~~aaDivl~~~~~~~i~~ai-~~gR~~~~~i~~~i~~~l~~ 656 (953)
+|++ |..|+++|||.||+.|+++||+||++ |+....|.-|||+.++++ +.+-+++ -|||..|+|-.+.-+|.+-.
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF--~Hv~rLLl~HGR~SYkrsa~laqfViHR 853 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQF--SHVSRLLLWHGRNSYKRSAKLAQFVIHR 853 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHH--HHHHHHhhccccchHHHHHHHHHHHHhh
Confidence 9986 89999999999999999999999999 644444555999999885 4454443 48999999999988876544
Q ss_pred HHHHHHHHHHHH-HhhcCC---ccHH-HHHHHHHhhhhchhccccCCCCCC----CCC---------CccchHHHHHHHH
Q 002208 657 TIRIVFGFMFIA-LIWKFD---FSPF-MVLIIAILNDGTIMTISKDRVKPS----PLP---------DSWKLKEIFATGV 718 (953)
Q Consensus 657 ni~~~~~~~~~~-~~~~~~---~~~~-~il~i~l~~~~~~~~l~~d~~~~~----~~p---------~~~~~~~~~~~~~ 718 (953)
...+..+..++. .++--| +.-+ ++.+..+.+-.+..++..|+.-.+ ..| .....+. |..++
T Consensus 854 GL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKt-F~iwv 932 (1051)
T KOG0210|consen 854 GLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKT-FFIWV 932 (1051)
T ss_pred hHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhh-hhhhh
Confidence 433222222211 111011 2222 333333333334577777764322 112 2222333 44455
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCccCccccCCCHHHHHHHHHHHHHHHHHHH-HhhhccCCCCcccChhHHHHHHHHH
Q 002208 719 VLGGYLALMTVIFFWAMHETDFFPDKFGVRAIRDSEHEMMAALYLQVSIVSQAL-IFVTRSRSWSYLERPGLLLVTAFVI 797 (953)
Q Consensus 719 ~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~rs~~~~~~~~~~~~l~~~~~~ 797 (953)
++++|++.+.+.++++.+.+.|+ ...++.|..+++....+ ++-+++ |. |.++++-++
T Consensus 933 LISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~t--w~------~~m~vae~l 990 (1051)
T KOG0210|consen 933 LISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRT--WH------WLMVVAELL 990 (1051)
T ss_pred hHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhh--hh------HHHHHHHHH
Confidence 56999988888766666544332 12355566666666554 334444 32 244455444
Q ss_pred HHHHHHHHHHhhccccc-ccccchHhHHHHHHHHHHHHHHHHHHHHHHhHHhcCch
Q 002208 798 AQLVATLIAVYANWGFA-RIKGVGWGWAGVIWLYSIVFYVPLDVMKFAIRYILSGK 852 (953)
Q Consensus 798 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 852 (953)
++.+..+-..+.. +++ .-.-.+|.+++-+.++.++..+|..+.|+++|++-||+
T Consensus 991 sL~~Yivsl~~l~-~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 991 SLALYIVSLAFLH-EYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred HHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 4433222111110 111 11112455555556777788889999999988887765
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.5e-75 Score=699.00 Aligned_cols=516 Identities=27% Similarity=0.390 Sum_probs=434.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECC-eEEEEEccCcCC
Q 002208 76 VMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDG-KWSEEEAAILVP 154 (953)
Q Consensus 76 il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG-~~~~i~~~~Lv~ 154 (953)
.+.++++++++++ .|.++.+|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3445566666665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc
Q 002208 155 GDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (953)
Q Consensus 155 GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~ 234 (953)
||+|.+++||.|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 4799999999999999999999999999999999999999999999999999998775
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCc
Q 002208 235 -NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (953)
Q Consensus 235 -~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~i 313 (953)
.+++++|+.+++++++++..++++.++.+++++. ...+ .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 5788999999999988766554434443333332 2222 77889999999999999999999999999999999999
Q ss_pred cccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCC--hHHHHHHHHHhccCcCCChHHHHHHHhcCChhh
Q 002208 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVE--KDHVMLLAARASRTENQDAIDAAIVGMLADPKE 391 (953)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~ 391 (953)
++|+++++|+||++|++|||||||||+|+|+|.+... . .+.+ +++++.+++..+.. ..||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999988653 1 2233 66777766655544 459999999988753211
Q ss_pred hhcCcc-eEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccC
Q 002208 392 ARAGIR-EVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVP 470 (953)
Q Consensus 392 ~~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~ 470 (953)
.... + ....+| .+.....+ +|. ..+..|+++.+ + ... .+ ....++.+++++++|+|+++++...
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 11222221 342 34567888876 1 111 11 1223455677889999999999754
Q ss_pred CCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccc
Q 002208 471 ERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDAS 549 (953)
Q Consensus 471 ~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~ 549 (953)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~----------------- 425 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----------------- 425 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-----------------
Confidence 899999999999999999999999999 999999999999999999999994
Q ss_pred cCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCc
Q 002208 550 IAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGL 629 (953)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~ 629 (953)
++|+++.|++|.++++.+++.++.|+|+|||.||+||+++|||||++|++++.+++.||+++.++++
T Consensus 426 -------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 426 -------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred -------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 2588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVF 662 (953)
Q Consensus 630 ~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~ 662 (953)
+.++.++++||++++||++++.|++.+|+..+.
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986543
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.5e-76 Score=698.43 Aligned_cols=498 Identities=30% Similarity=0.422 Sum_probs=426.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCC
Q 002208 76 VMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPG 155 (953)
Q Consensus 76 il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~G 155 (953)
++.++++++++++ +|.++.+|+++++++..+++++++|+++.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777777765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-
Q 002208 156 DIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (953)
Q Consensus 156 DiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~- 234 (953)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+||+.++++..
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 5789999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCcc
Q 002208 235 NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (953)
Q Consensus 235 ~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~il 314 (953)
.+++++|+.+++++++++..++++.++.+++++... .+..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 478899999999998876665554444444433322 233378889999999999999999999999999999999999
Q ss_pred ccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhc
Q 002208 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARA 394 (953)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 394 (953)
+|+++++|++|++|++|||||||||+|+|+|.+... .+++.+++..+ ....||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e-~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAE-QASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHh-ccCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999987642 25666666443 3456999999998765321
Q ss_pred CcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCC
Q 002208 395 GIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTK 474 (953)
Q Consensus 395 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~ 474 (953)
.+...+.+|. +..... .+|+. +..|+++.+.+.. .+.+..+|.+++.++...
T Consensus 300 ~~~~~~~~~g----~gi~~~---~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----EGVRAV---VDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----CeEEEE---ECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 1222222221 111111 24543 4568887653311 014567788888887543
Q ss_pred CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCch
Q 002208 475 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAAL 553 (953)
Q Consensus 475 ~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~ 553 (953)
.++|.+.++|++|||++++|++|+++|+ +++|+|||+..++..+++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999994
Q ss_pred hHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec-CchHHHhhccCEeecCCCchhH
Q 002208 554 PVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVI 632 (953)
Q Consensus 554 ~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg-~~t~~a~~aaDivl~~~~~~~i 632 (953)
++|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| ++++.++++||+++.+++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 248889999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002208 633 ISAVLTSRAIFQRMKNYTIYAVSITIRIVF 662 (953)
Q Consensus 633 ~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~ 662 (953)
.+++..||++++|+++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975443
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7.4e-75 Score=691.08 Aligned_cols=506 Identities=27% Similarity=0.394 Sum_probs=421.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEEC-CeEEEEEccCcCCCcEEEEcCCCcccccEEEEe
Q 002208 96 DWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRD-GKWSEEEAAILVPGDIISIKLGDIIPADARLLE 174 (953)
Q Consensus 96 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd-G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 174 (953)
+|....++++++++...++.+.++|+++++++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3445555667777777888888889999999999999999999985 778999999999999999999999999999999
Q ss_pred cCCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002208 175 GDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 253 (953)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~ 253 (953)
| .+.||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5789999999999999999999999999999999999999999999999999999876 4789999999999988766
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecC
Q 002208 254 SIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (953)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~D 333 (953)
.+++..++.+ +.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~-~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITF-VIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHH-HHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 5444333222 222 24788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEEE
Q 002208 334 KTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTAL 413 (953)
Q Consensus 334 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 413 (953)
||||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s-~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGS-EHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998652 22456777888777665544 49999999987743211111111122222 122222
Q ss_pred EEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCC
Q 002208 414 TYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPP 493 (953)
Q Consensus 414 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~l 493 (953)
.+ +| ..+..|+++.+.+.. .. ++++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~~---~g--~~~~iG~~~~~~~~~---~~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 TV---EG--TKIQLGNEKLLGENA---IK--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred EE---CC--EEEEEECHHHHHhCC---CC--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 21 45 346789998864311 11 112457899999988654 899999999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHH
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHK 573 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K 573 (953)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 3788899999
Q ss_pred HHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002208 574 YEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (953)
Q Consensus 574 ~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~ 653 (953)
.++++.++++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.++++..+..+++.||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccHH
Q 002208 654 VSITIRIVFGFMFIALIWKFDFSPF 678 (953)
Q Consensus 654 l~~ni~~~~~~~~~~~~~~~~~~~~ 678 (953)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999865544443333344445553
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=8.5e-74 Score=712.84 Aligned_cols=521 Identities=24% Similarity=0.317 Sum_probs=434.4
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec
Q 002208 97 WQD-FVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG 175 (953)
Q Consensus 97 ~~~-~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 175 (953)
|++ +..+++++.+...++.+.+.|+.+++++|+++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 444 5677788888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCCCeeEecCCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002208 176 DPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 254 (953)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~ 254 (953)
...||||+|||||.|+.|++||.||+||.+.+|.+.+.|+++|.+|.+||+.++++++ ..++++|+..++++.+++..
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999876 47889999999999887655
Q ss_pred HHHHHHHHHHHHHhcccc--chHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEec
Q 002208 255 IAVGMLVEIIVMYPIQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 332 (953)
Q Consensus 255 i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~ 332 (953)
++++.++.+++++. .+. .+..++..++++++++|||||++++|+++..+..+++++|+++|+++++|+|+++|++||
T Consensus 444 v~~~a~~~~~~~~~-~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAAIWYF-FGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 55433333333332 222 255677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCCCCceEE
Q 002208 333 DKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTA 412 (953)
Q Consensus 333 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~s 412 (953)
|||||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.+. ... ...+|.....+.
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g~G- 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDM-----TLP--QVNGFRTLRGLG- 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhC-----CCC--CcccceEecceE-
Confidence 999999999999987642 22466777777777665444 499999998876421 111 111232222211
Q ss_pred EEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCC
Q 002208 413 LTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDP 492 (953)
Q Consensus 413 v~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~ 492 (953)
+... .+|+ .+.+|+++.+.+... ..+.+.+.+++++++|.++++++++. .++|++.+.|+
T Consensus 591 v~~~-~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSGE-AEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEEE-ECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 1111 2454 456799998754221 12345666778889999999999865 79999999999
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEH 572 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~ 572 (953)
+|||++++|++|++.|+++.|+|||+..+|..+++++|+. ++|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHH
Confidence 9999999999999999999999999999999999999985 2588999999
Q ss_pred HHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002208 573 KYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (953)
Q Consensus 573 K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~ 652 (953)
|.++++.++.+++.|+|+|||.||+|||++||+||+||+|++.++++||++++++++..|..++++||+++++|++++.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCccHHHHH
Q 002208 653 AVSITIRIVFGFMFIALI-WKFDFSPFMVL 681 (953)
Q Consensus 653 ~l~~ni~~~~~~~~~~~~-~~~~~~~~~il 681 (953)
++.+|+..+...+..+.. +++.++|+.-.
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~ 810 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVVAG 810 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHHHH
Confidence 999998655433321111 23246665433
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-72 Score=632.50 Aligned_cols=572 Identities=24% Similarity=0.304 Sum_probs=428.0
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhh
Q 002208 21 IPIEEVFEQLKCTREGLSS-TEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPDWQD 99 (953)
Q Consensus 21 ~~~~~~~~~l~~~~~GLt~-~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~~~~ 99 (953)
.|.++.+-.++.+ +|+.. +|++.-.++||.|+.+...+.+-..|.+.-..|+ ++|.+.++..|.+. ..|+.
T Consensus 148 fp~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 3444444444433 56663 4444444569999999999988888999999998 67888888888875 47777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcC---CCcccccEEEEecC
Q 002208 100 FVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKL---GDIIPADARLLEGD 176 (953)
Q Consensus 100 ~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~---Gd~IPaD~~ll~g~ 176 (953)
.+.-+++++..-.--..|+.+.-+.... |..-+....|+|+++|+.+..+||.|||+|.+.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7766655544333333444444333332 2334667899999999999999999999999987 5689999999999
Q ss_pred CeEEeecCCCCCCeeEecCCC-----------------Ccccccceeee-------------ceEEEEEEEecchhHHHH
Q 002208 177 PLKVDQSALTGESLPVTKNPG-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 226 (953)
Q Consensus 177 ~l~Vdes~LTGEs~pv~K~~g-----------------~~v~~Gs~v~~-------------G~~~~vVi~tG~~T~~gk 226 (953)
+|.|||++|||||.|.-|.+- ..+|.||.+++ |-+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 688999999999999999871 26899999876 559999999999999998
Q ss_pred HHHhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cchHHHHHHHHHHHHhhcccchHHHHHH
Q 002208 227 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSV 299 (953)
Q Consensus 227 i~~l~~~-~~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~l~llv~~iP~aLp~~~~i 299 (953)
+.+.+-- +++.+.-.+ ..+ .+++.++ +++++..+|.+.. ++-...+.-+..++...+|.-||+-+++
T Consensus 378 LvRtilf~aervTaNn~--Etf--~FILFLl--VFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNR--ETF--IFILFLL--VFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred eeeeEEecceeeeeccH--HHH--HHHHHHH--HHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH
Confidence 8775533 333222111 111 1111111 1111222333221 1122345556667888999999999999
Q ss_pred HHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhc-------cCCChHHHHHHHHHhccC
Q 002208 300 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFA-------KGVEKDHVMLLAARASRT 372 (953)
Q Consensus 300 ~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-------~~~~~~~~l~~a~~~~~~ 372 (953)
+.-.+...|+|.+++|..+-.|.-.|++|+.|||||||||+..|.|....-..-. .....+.+..+|++++-.
T Consensus 452 AVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 452 AVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999864320000 011233455566555421
Q ss_pred -----cCCChHHHHHHHhcCCh---------hh-hhcCcceEEeecCCCCCceEEEEEEcCC----CcEEEEEeCcHHHH
Q 002208 373 -----ENQDAIDAAIVGMLADP---------KE-ARAGIREVHFFPFNPVDKRTALTYIDSD----GHWHRASKGAPEQI 433 (953)
Q Consensus 373 -----~~~~~~~~ai~~~~~~~---------~~-~~~~~~~l~~~pF~s~~kr~sv~~~~~~----g~~~~~~KGa~e~i 433 (953)
--+||++.|.+..++-. .+ .....++.+.+.|+|.-|||+++..... -+++..+|||||.|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 23699999999877411 11 1224777889999999999999875322 36788899999999
Q ss_pred HHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCC--------CCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHH
Q 002208 434 LALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPE--------RTKESPGGPWQFVGLLPLFDPPRHDSAETIRRAL 505 (953)
Q Consensus 434 l~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~--------~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~ 505 (953)
.++.. ++++.+++...+|+++|.||||++||+++. -.+|+.|++|+|.|++.|.-|+|+|++++|++|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 98875 567889999999999999999999999873 2368899999999999999999999999999999
Q ss_pred hcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcc---------------------------------------ccCccc
Q 002208 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSAS---------------------------------------LLGQDK 546 (953)
Q Consensus 506 ~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~---------------------------------------l~~~~~ 546 (953)
+.+.+|+||||||+.||.++|+++|+..+..+... ++|...
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 99999999999999999999999999654211000 011111
Q ss_pred ccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecC
Q 002208 547 DASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVAD 611 (953)
Q Consensus 547 ~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~ 611 (953)
+.....+.+.+++..+.||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+-+
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 11112224455667788999999999999999999999999999999999999999999999853
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-62 Score=533.91 Aligned_cols=520 Identities=26% Similarity=0.368 Sum_probs=402.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHHHHHHHHH----HHHHHHHhhhHHHHhhcCC-CCeEEE
Q 002208 68 FMWNPLSWVMEAAAVMAIALA----NGEGKPPDWQDFVGIVCLLVINSTI----SFIEENNAGNAAAALMAGL-APKTKL 138 (953)
Q Consensus 68 ~~~~~~~~il~~~ail~~~l~----~~~~~~~~~~~~~~i~~~~~i~~~i----~~~~e~~~~~~~~~l~~~~-~~~~~V 138 (953)
+.+||..++-++.++++.++. ..++...++.....|.+++.+..++ +.+.|-|.+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888877777777766322 1111112333333333334444333 4444545444455665432 335677
Q ss_pred EEC-CeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCC---CcccccceeeeceEEEE
Q 002208 139 LRD-GKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPG---DEVFSGSTCKQGEIEAV 214 (953)
Q Consensus 139 ~Rd-G~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~v 214 (953)
+++ |.++.+++.+|+.||+|+++.||.||+||.++|| ..+||||++||||.||-|.+| +.|-.||.+.+...+..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 8999999999999999999999999999999999 678999999999999999998 67889999999999999
Q ss_pred EEEecchhHHHHHHHhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--chHHHHHHHHHHHHhhccc
Q 002208 215 VIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHR--KYRDGIDNLLVLLIGGIPI 291 (953)
Q Consensus 215 Vi~tG~~T~~gki~~l~~~~-~~~~~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~ 291 (953)
+++.-.+|++.|+..+++.+ .+++|-+--++-+. ..+.++++++ ..-.|++..+ .-.-.+...++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL---~~LTliFL~~-~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILL---SGLTLIFLLA-VATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHH---HHHHHHHHHH-HHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 99999999999999999877 46777554443321 1111111111 1112221110 0112456778899999999
Q ss_pred chHHHHHHHHHHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhcc
Q 002208 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASR 371 (953)
Q Consensus 292 aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 371 (953)
...--++-.--.|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+=.-.+.. ...|.+.+++...|..+|-
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhh
Confidence 8888888777789999999999999999999999999999999999999875544443 3457888888887777665
Q ss_pred CcCCChHHHHHHHhcCChh-hh-hcCcc-eEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccH-HHHHHH
Q 002208 372 TENQDAIDAAIVGMLADPK-EA-RAGIR-EVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAKE-DLKKKV 447 (953)
Q Consensus 372 ~~~~~~~~~ai~~~~~~~~-~~-~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 447 (953)
..+ .|--..++..+.... +. ..... ...+.||+.+.+++.+-. +++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 443 454555655543211 11 11111 357899998877665432 233 5678999999999887543 378889
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 527 (953)
++..++-++.|-..|+|+... +++|++.+.|-++|+.+|-+.+||++|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999999866 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 528 RLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 528 ~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
+.|+++ ..|.++||+|.++++.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999863 47899999999999999999999999999999999999999999
Q ss_pred EecCchHHHhhccCEeecCCCchhHHHHHHHhHHHH
Q 002208 608 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIF 643 (953)
Q Consensus 608 amg~~t~~a~~aaDivl~~~~~~~i~~ai~~gR~~~ 643 (953)
||.+||++||+|+.+|=+|.|...+.+.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.9e-35 Score=315.51 Aligned_cols=222 Identities=35% Similarity=0.514 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCe-EEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEE
Q 002208 102 GIVCLLVINSTISFIEENNAGNAAAALMAGLAPK-TKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKV 180 (953)
Q Consensus 102 ~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~-~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~V 180 (953)
+|+++++++..+++++++++++.++++++..+++ ++|+|||+++++++++|+|||+|.|++||.+||||++++...+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3677888899999999999999999999988887 999999999999999999999999999999999999999337999
Q ss_pred eecCCCCCCeeEecC-----CCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002208 181 DQSALTGESLPVTKN-----PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 254 (953)
Q Consensus 181 des~LTGEs~pv~K~-----~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~-~~~~lq~~~~~i~~~~~~~ 254 (953)
|||+||||+.|+.|. +|+.+|+||.+.+|.+.++|++||.+|..|++.+.+.... +++++++.++++..+++..
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887664 5689999999999887655
Q ss_pred HHHHHHHHHHHHHh-ccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhhCCccccchhHHHh
Q 002208 255 IAVGMLVEIIVMYP-IQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323 (953)
Q Consensus 255 i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~l~~~~ilvk~~~~iE~ 323 (953)
++++.++.+++++. ....++...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 54434333332222 2456778889999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=4.5e-26 Score=239.77 Aligned_cols=211 Identities=32% Similarity=0.435 Sum_probs=151.7
Q ss_pred ceEEecCCCCCCCCCceEEEEeeeehhccCCChHHHHHHHHHhccCcCCChHHHHHHHhcCChhhhhcCcceEEeecCCC
Q 002208 327 MDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNP 406 (953)
Q Consensus 327 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~s 406 (953)
|++||||||||||+|++.+ . . .+...++..+...... ..||+..++..+....... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~-s~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQG-SEHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCT-STSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhc-CCCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999999 1 1 4455555555444333 4499999998876543221 11 112222
Q ss_pred CCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEE
Q 002208 407 VDKRTALTYIDSDGHWHRASKGAPEQILALCNAKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGL 486 (953)
Q Consensus 407 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~ 486 (953)
...++..... ++. +. |+++.+.+..... .. ...........|...+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--IS--PDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--cc--cchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222221111 122 22 8888877655421 11 11111223445556666654 3589999
Q ss_pred eecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 487 i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
+.+.|+|||+++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 13799
Q ss_pred ec--CHHHH--HHHHHHhcccCCEEEEEcCCccCHHhhhhCC
Q 002208 567 GV--FPEHK--YEIVKKLQERKHICGMTGDGVNDAPALKKAD 604 (953)
Q Consensus 567 r~--~P~~K--~~iV~~lq~~g~~V~~~GDG~ND~paLk~Ad 604 (953)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999988779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.57 E-value=1.2e-14 Score=133.81 Aligned_cols=116 Identities=27% Similarity=0.394 Sum_probs=105.1
Q ss_pred EEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHh
Q 002208 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEK 561 (953)
Q Consensus 482 ~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 561 (953)
...+.++---++=++++++|++|++. ++|.+.|||...+-...|+-+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 46677777788889999999999999 99999999999999999999998642
Q ss_pred cCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-c--CchHHHhhccCEeecC
Q 002208 562 ADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARGASDIVLTE 626 (953)
Q Consensus 562 ~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g--~~t~~a~~aaDivl~~ 626 (953)
++|+..-|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +.++-+..+||+++-+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 57999999999999999999999999999999999999999999987 4 5667788999999854
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.36 E-value=1.4e-12 Score=111.74 Aligned_cols=67 Identities=36% Similarity=0.544 Sum_probs=61.2
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccc-cccchHHHHHHHHHhHHHHHHHHHHHHH
Q 002208 18 LERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEE-KKESKILKFLGFMWNPLSWVMEAAAVMA 84 (953)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~-~~~~~~~~~l~~~~~~~~~il~~~ail~ 84 (953)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++.+.|+.|+++|++|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7899999999999966 78999999999999999999954 5688899999999999999999999886
No 38
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.34 E-value=1.5e-09 Score=123.23 Aligned_cols=210 Identities=17% Similarity=0.201 Sum_probs=145.9
Q ss_pred CcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcc--------------
Q 002208 480 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQD-------------- 545 (953)
Q Consensus 480 ~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~-------------- 545 (953)
+-.|.|++...-++|++....|+.|-++-|+.+-.+-.+..-.+-.|.++||...+.....+...+
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 447999999999999999999999999999999999999999999999999976433211110000
Q ss_pred -------------------ccc---------------cc--------CchhHHH-----------------HHHhcCcEe
Q 002208 546 -------------------KDA---------------SI--------AALPVEE-----------------LIEKADGFA 566 (953)
Q Consensus 546 -------------------~~~---------------~~--------~~~~~~~-----------------~~~~~~vfa 566 (953)
+.+ .+ ++....+ +-.-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 000 00 0000000 000122588
Q ss_pred ecCHHHHHHHHHHhcccCCEEEEEcCCccCHH--hhhhCCeeEEecC--c-----------hHH--Hh------------
Q 002208 567 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAP--ALKKADIGIAVAD--A-----------TDA--AR------------ 617 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~p--aLk~AdVGIamg~--~-----------t~~--a~------------ 617 (953)
.++|+.--++++.+|++|++|+.+|...|-.. ..-+|||+|++.. . +.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 99999999999999999999999999998543 3468999999852 1 111 11
Q ss_pred ----hccCEeecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCccHHHHHHHHHhhhh
Q 002208 618 ----GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF-IALIWKFDFSPFMVLIIAILNDG 689 (953)
Q Consensus 618 ----~aaDivl~~~~~~~i~~ai~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~~~ 689 (953)
-++|+-+-...+-+|..+|+..|.-..-+|+.+.|.+.......+..+. .+++.+..|+--+++|...|--.
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~P 1130 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIP 1130 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHH
Confidence 1233333333455788899999999999999999988877655444444 44456666777788887776543
No 39
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.19 E-value=3.6e-10 Score=116.18 Aligned_cols=166 Identities=16% Similarity=0.180 Sum_probs=113.4
Q ss_pred cCCccHHHHHHHHHhhhhc-hhccccCCCCCC---CCC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 002208 672 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PLP----DSWKLKEIFATGVVLGGYLALMTVIFFWAMHETDFFPD 743 (953)
Q Consensus 672 ~~~~~~~~il~i~l~~~~~-~~~l~~d~~~~~---~~p----~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 743 (953)
|.|++|+|+||+|+++|.+ ++++++|+++++ ++| ++...++.+...+..|+++++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999998 699999998764 122 222345677777889999999999888776531
Q ss_pred ccCccc--cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCccc----ChhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002208 744 KFGVRA--IRDSEHEMMAALYLQVSIVSQALIFVTRSRSWSYLE----RPGLLLVTAFVIAQLVATLIAVYAN--WGFAR 815 (953)
Q Consensus 744 ~~g~~~--~~~~~~~~~t~~~~~~~~~~~~~~~~~rs~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 815 (953)
+|... ...+....+|++|..+++++.++.++.|+++.+.+. +.|++++.+++++.++..++ +|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 12111 011245689999999999999999999996643222 23557777777666554444 4543 22356
Q ss_pred cccchHhHHHHHHHHHHHHHHHHHHHHHH
Q 002208 816 IKGVGWGWAGVIWLYSIVFYVPLDVMKFA 844 (953)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 844 (953)
+.+.++.+|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 77778888888899999999999999974
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.07 E-value=3.2e-10 Score=95.56 Aligned_cols=60 Identities=45% Similarity=0.703 Sum_probs=53.9
Q ss_pred HcCCCCC-CCCHHHHHHHHHhcCCCcccccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 002208 29 QLKCTRE-GLSSTEGANRLQIFGPNKLEEKK-ESKILKFLGFMWNPLSWVMEAAAVMAIALA 88 (953)
Q Consensus 29 ~l~~~~~-GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~il~~~ail~~~l~ 88 (953)
.|+++.+ |||++|+++|+++||+|++++++ .++|..|+++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4667754 99999999999999999998875 788999999999999999999999998863
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.91 E-value=6.8e-09 Score=108.43 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=95.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.....+...+.+. ...++ ..-..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 68999999999999975 99999999999999999999996322111111000 00000 0114578
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHHHh
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTS 639 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~~g 639 (953)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999888888999999999999999999999997655555544444333 4566777766554
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.90 E-value=4.1e-09 Score=117.42 Aligned_cols=131 Identities=19% Similarity=0.264 Sum_probs=98.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+..+ .+...... + -+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~v~g------~---iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGNVLG------D---IVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeEecC------c---cCCcc
Confidence 57899999999999999999999999988888999999985311100000000 00000000 0 02346
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
.|.+.++.+.++ .+.|.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..++..+
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 788888877654 35799999999999999999999999 88999999999999988998887665
No 43
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.86 E-value=1.2e-08 Score=108.92 Aligned_cols=153 Identities=25% Similarity=0.297 Sum_probs=103.3
Q ss_pred EEeecCCC-CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCcc-c-c---Ccccc-cc-------
Q 002208 485 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSAS-L-L---GQDKD-AS------- 549 (953)
Q Consensus 485 G~i~i~D~-lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~~-l-~---~~~~~-~~------- 549 (953)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+.+|+..... .+.. + . +.... ..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999864211 0000 0 0 00000 00
Q ss_pred --------------------------------cCchhHHHHHHhcC--c-------EeecCHHH--HHHHHHHhccc---
Q 002208 550 --------------------------------IAALPVEELIEKAD--G-------FAGVFPEH--KYEIVKKLQER--- 583 (953)
Q Consensus 550 --------------------------------~~~~~~~~~~~~~~--v-------far~~P~~--K~~iV~~lq~~--- 583 (953)
...+++.+.+++.. + +..+.|.. |..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00011222222111 0 12333333 66666655433
Q ss_pred -CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 584 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 584 -g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
...++++||+.||.+|++.|++|+||+++.+.+|++||+|..+++-.++..+++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 346999999999999999999999999999999999999998888888888774
No 44
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.82 E-value=9.6e-09 Score=108.55 Aligned_cols=144 Identities=21% Similarity=0.265 Sum_probs=98.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCc-cccCc-cc-------cc-------------
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSA-SLLGQ-DK-------DA------------- 548 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~-~l~~~-~~-------~~------------- 548 (953)
++.+.+.++|++|++.|+++.+.||.+...+..+++++++..... .+. .+... .. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999864211 000 00000 00 00
Q ss_pred --------------ccCc---hhHHHHHHhcCc-------EeecCH--HHHHHHHHHhccc----CCEEEEEcCCccCHH
Q 002208 549 --------------SIAA---LPVEELIEKADG-------FAGVFP--EHKYEIVKKLQER----KHICGMTGDGVNDAP 598 (953)
Q Consensus 549 --------------~~~~---~~~~~~~~~~~v-------far~~P--~~K~~iV~~lq~~----g~~V~~~GDG~ND~p 598 (953)
..+. +.+.+.+....+ +..++| -.|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 111222221111 112223 3677777776543 335899999999999
Q ss_pred hhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 599 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 599 aLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
|++.|++|+||++|.+.+|+.||+|..+++-.++..+
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999987776666654
No 45
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.81 E-value=1.3e-08 Score=107.81 Aligned_cols=129 Identities=22% Similarity=0.281 Sum_probs=92.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee-cCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG-VFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~~P 570 (953)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- ........ +..... .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998641 11100000 000000 00001 112
Q ss_pred HHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 571 EHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 571 ~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
+.|..+++.+.++ ...+.|+||+.||.+|++.|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3366666655443 245889999999999999999999985 567888899999999998877643
No 46
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.78 E-value=1.2e-08 Score=92.20 Aligned_cols=65 Identities=31% Similarity=0.443 Sum_probs=54.1
Q ss_pred CCChHHHHHHHhcCC------hhhhhcCcceEEeecCCCCCceEEEEEEcCCCcEEEEEeCcHHHHHHHhhc
Q 002208 374 NQDAIDAAIVGMLAD------PKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNA 439 (953)
Q Consensus 374 ~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 439 (953)
.++|+|.|++.++.. ....+..+++++.+||||++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 458999999887642 3456788999999999999999999998 3345677999999999999973
No 47
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.78 E-value=2.8e-08 Score=100.43 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=84.3
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe--ecCHHHHHHH
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA--GVFPEHKYEI 576 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa--r~~P~~K~~i 576 (953)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |. .-.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 589999999999999999999999999999998521 11 1225555566
Q ss_pred HHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCch
Q 002208 577 VKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 577 V~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~ 630 (953)
++.++-....|+++||+.||.+|++.|++++||+++.+.++..||+|...++=.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCC
Confidence 666655556799999999999999999999999999999999999998755543
No 48
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.77 E-value=4.5e-08 Score=106.88 Aligned_cols=154 Identities=22% Similarity=0.228 Sum_probs=106.4
Q ss_pred EEeecCCC-CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC---------CCccc-------------
Q 002208 485 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY---------PSASL------------- 541 (953)
Q Consensus 485 G~i~i~D~-lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---------~~~~l------------- 541 (953)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... +...+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 34444444 88999999999999999999999999999999999999975211 00000
Q ss_pred --------------cCcc-----------c----------------c---------cccCchhHHHH---HHh-----cC
Q 002208 542 --------------LGQD-----------K----------------D---------ASIAALPVEEL---IEK-----AD 563 (953)
Q Consensus 542 --------------~~~~-----------~----------------~---------~~~~~~~~~~~---~~~-----~~ 563 (953)
.... . . .....+...+. +.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0 0 00000111111 111 11
Q ss_pred cE-------eecCHH--HHHHHHHHhccc-CC---EEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCch
Q 002208 564 GF-------AGVFPE--HKYEIVKKLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 630 (953)
Q Consensus 564 vf-------ar~~P~--~K~~iV~~lq~~-g~---~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~ 630 (953)
.+ ..+.|. +|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+||++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 233333 577777776653 43 499999999999999999999999999999999999888889999
Q ss_pred hHHHHHHH
Q 002208 631 VIISAVLT 638 (953)
Q Consensus 631 ~i~~ai~~ 638 (953)
+|..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99988854
No 49
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.77 E-value=3.1e-08 Score=108.43 Aligned_cols=53 Identities=19% Similarity=0.213 Sum_probs=49.2
Q ss_pred CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 585 ~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
..|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-.++..+++
T Consensus 213 ~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 213 EEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 45899999999999999999999999999999999999998888888888774
No 50
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.72 E-value=6.6e-08 Score=102.73 Aligned_cols=145 Identities=24% Similarity=0.314 Sum_probs=98.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccc-cCc--c------cc-------------
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSASL-LGQ--D------KD------------- 547 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~~~--~------~~------------- 547 (953)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... +...+ ... . ..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643211 00000 000 0 00
Q ss_pred -----------c--------ccCchhHHHHHHhcC---------cEeecCH--HHHHHHHHHhccc----CCEEEEEcCC
Q 002208 548 -----------A--------SIAALPVEELIEKAD---------GFAGVFP--EHKYEIVKKLQER----KHICGMTGDG 593 (953)
Q Consensus 548 -----------~--------~~~~~~~~~~~~~~~---------vfar~~P--~~K~~iV~~lq~~----g~~V~~~GDG 593 (953)
. ..+.+...++++... .+..+.| ..|..-++.+.++ ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 000111122222111 1223333 3677766666543 3569999999
Q ss_pred ccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchh----HHHHH
Q 002208 594 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV----IISAV 636 (953)
Q Consensus 594 ~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~----i~~ai 636 (953)
.||.+|++.|++|+||+|+.+.+|+.||+|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999988777777 55554
No 51
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.71 E-value=1.9e-08 Score=110.33 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=53.1
Q ss_pred HHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCE--eecCCCchhHHHHHH
Q 002208 573 KYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI--VLTEPGLSVIISAVL 637 (953)
Q Consensus 573 K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDi--vl~~~~~~~i~~ai~ 637 (953)
|..-++.+.+. ...|+++|||.||.+||+.|+.||||+||.+.+|++||. |..+++-.++..+++
T Consensus 189 Kg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 189 KGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred hHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 55555555432 245999999999999999999999999999999999996 667777888887773
No 52
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.70 E-value=5.6e-08 Score=97.16 Aligned_cols=101 Identities=28% Similarity=0.348 Sum_probs=80.6
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHH
Q 002208 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKK 579 (953)
Q Consensus 500 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~ 579 (953)
+|++|++.|+++.++||+....+..+.+++|+.... .+ ..-.|+-..++.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~------~~----------------------~~~k~~~~~~~~~~ 87 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY------QG----------------------QSNKLIAFSDILEK 87 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE------ec----------------------ccchHHHHHHHHHH
Confidence 999999999999999999999999999999985311 00 01123333444444
Q ss_pred hcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCC
Q 002208 580 LQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628 (953)
Q Consensus 580 lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~ 628 (953)
+.-....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+.
T Consensus 88 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 88 LALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 4444567999999999999999999999999998999999999998664
No 53
>PRK10976 putative hydrolase; Provisional
Probab=98.70 E-value=9.1e-08 Score=104.55 Aligned_cols=53 Identities=23% Similarity=0.245 Sum_probs=47.4
Q ss_pred CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC--EeecCCCchhHHHHHH
Q 002208 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD--IVLTEPGLSVIISAVL 637 (953)
Q Consensus 585 ~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD--ivl~~~~~~~i~~ai~ 637 (953)
..|+++|||.||.+||+.|+.||||+||++.+|++|| .|..+++-.++..+++
T Consensus 207 ~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 207 KDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 3589999999999999999999999999999999988 6777777788887774
No 54
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.60 E-value=1.6e-07 Score=98.59 Aligned_cols=118 Identities=19% Similarity=0.194 Sum_probs=84.6
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee-cC
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG-VF 569 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~~ 569 (953)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++....+.....++ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 679999999999999999999999999999999999999997532211111100 0000 12322 34
Q ss_pred HHHHHHHHHHhcc-cCC---EEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEe
Q 002208 570 PEHKYEIVKKLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 623 (953)
Q Consensus 570 P~~K~~iV~~lq~-~g~---~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDiv 623 (953)
.+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+|++..... .+..|+..
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~ 198 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVR 198 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHh
Confidence 4788888866554 354 59999999999999999999999974433 23344433
No 55
>PLN02887 hydrolase family protein
Probab=98.58 E-value=3.2e-07 Score=109.40 Aligned_cols=52 Identities=21% Similarity=0.368 Sum_probs=48.9
Q ss_pred EEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 586 ~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
.|+++|||.||.+||+.|+.||||+||.+.+|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999998888889888875
No 56
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.56 E-value=1.4e-07 Score=101.15 Aligned_cols=146 Identities=20% Similarity=0.235 Sum_probs=99.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC-CCcccc-C-------------------------
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY-PSASLL-G------------------------- 543 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-~~~~l~-~------------------------- 543 (953)
..+.+.+.++|++++++|+++.+.||+....+..+..++++..... ....+. .
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 3467899999999999999999999999999999999999863111 000000 0
Q ss_pred ----------------ccc--c------------------------------cccCchhHHHHH-------Hhc------
Q 002208 544 ----------------QDK--D------------------------------ASIAALPVEELI-------EKA------ 562 (953)
Q Consensus 544 ----------------~~~--~------------------------------~~~~~~~~~~~~-------~~~------ 562 (953)
... . ...+.+.+.++. ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 0 000011111111 000
Q ss_pred -CcEeecCH--HHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 563 -DGFAGVFP--EHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 563 -~vfar~~P--~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
.-+-.++| -.|..-++.+.+. ...++++||+.||.+||+.|+.|+||+++++..++.||++....+-.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 01223334 3577777666542 3578999999999999999999999999999999999999988776787765
Q ss_pred H
Q 002208 636 V 636 (953)
Q Consensus 636 i 636 (953)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 57
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.54 E-value=7.8e-07 Score=96.68 Aligned_cols=55 Identities=20% Similarity=0.208 Sum_probs=47.0
Q ss_pred CCEEEEEcCCccCHHhhhhCCeeEEecCch---HHHhhc--c-CEeecCCCchhHHHHHHH
Q 002208 584 KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARGA--S-DIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 584 g~~V~~~GDG~ND~paLk~AdVGIamg~~t---~~a~~a--a-Divl~~~~~~~i~~ai~~ 638 (953)
...|.++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-.++..++++
T Consensus 194 ~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 456999999999999999999999999987 478876 4 588888888888888753
No 58
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.54 E-value=4.7e-07 Score=99.09 Aligned_cols=53 Identities=26% Similarity=0.418 Sum_probs=48.9
Q ss_pred CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHHHH
Q 002208 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 585 ~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
..|+++||+.||.+|++.|++|+|||++.+..|+.||+|..+++-.++..+++
T Consensus 216 ~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 45899999999999999999999999999999999999998888888888874
No 59
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.46 E-value=3.6e-07 Score=94.04 Aligned_cols=97 Identities=26% Similarity=0.343 Sum_probs=77.1
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHH
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVK 578 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~ 578 (953)
.+|+.|++.|+++.++||.....+..+++++|+... |.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecC--CCcHHHHHH
Confidence 699999999999999999999999999999998521 110 122333333
Q ss_pred H----hcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCC
Q 002208 579 K----LQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEP 627 (953)
Q Consensus 579 ~----lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~ 627 (953)
. +.-....|+|+||+.||.+|++.|+++++++++.+..+..||+++..+
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~ 155 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIA 155 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCC
Confidence 3 333345799999999999999999999999988888899999999643
No 60
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.44 E-value=1.2e-06 Score=91.65 Aligned_cols=127 Identities=20% Similarity=0.218 Sum_probs=89.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|+++ +++.++|+-....+..+.+++|+.... ........+ . .... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~-~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CHSLEVDED-G-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cceEEECCC-C-eEEC------------ccccccc
Confidence 4689999999999999 999999999999999999999985311 111000000 0 0000 0012377
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCE-eecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI-VLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDi-vl~~~~~~~i~~ai 636 (953)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+...+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 888999999888899999999999999999999999887544444445565 43 3455554433
No 61
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.43 E-value=7.6e-07 Score=96.71 Aligned_cols=64 Identities=25% Similarity=0.285 Sum_probs=53.2
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCCchhHHHH
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISA 635 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~a 635 (953)
.|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++++.+|+.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 366666665543 2469999999999999999999999999999999999999988777777654
No 62
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.39 E-value=3e-06 Score=92.95 Aligned_cols=55 Identities=22% Similarity=0.166 Sum_probs=45.3
Q ss_pred CCEEEEEcCCccCHHhhhhCCeeEEecCch-H--H---HhhccCEeecCCCchhHHHHHHH
Q 002208 584 KHICGMTGDGVNDAPALKKADIGIAVADAT-D--A---ARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 584 g~~V~~~GDG~ND~paLk~AdVGIamg~~t-~--~---a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
...|+++|||.||.+||+.|++||||+++. + . .+..+|++....+-.++.+++++
T Consensus 206 ~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 206 RPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 356999999999999999999999998544 2 1 34579999988888888888754
No 63
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.38 E-value=8.4e-07 Score=92.31 Aligned_cols=117 Identities=26% Similarity=0.360 Sum_probs=83.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... ......... ..... -+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~--~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE--KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC--CCeEe----------cceeeEEccc
Confidence 5899999999999999999999999999999999999997531 111111100 00000 0112234466
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASD 621 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD 621 (953)
.|.++++.+.++ .+.+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 777777665443 34699999999999999999999999765555666665
No 64
>PRK08238 hypothetical protein; Validated
Probab=98.38 E-value=0.00023 Score=83.79 Aligned_cols=100 Identities=19% Similarity=0.273 Sum_probs=75.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5889999999999999999999999999999999999998321 111111 1135566
Q ss_pred HHHHHHHH-hcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHh
Q 002208 572 HKYEIVKK-LQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (953)
Q Consensus 572 ~K~~iV~~-lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~ 617 (953)
.|.+.++. +.++| +.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~~~--~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGERG--FDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCccC--eeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 67655443 33322 5789999999999999999999986554443
No 65
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.29 E-value=3.7e-06 Score=88.85 Aligned_cols=111 Identities=16% Similarity=0.083 Sum_probs=78.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc-cCcccccccCchhHHHHHHhcCcE--ee
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASL-LGQDKDASIAALPVEELIEKADGF--AG 567 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~vf--ar 567 (953)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+.+... .+.......+. ...+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 478999999999999999999999999999999888887543332221111 11111000000 0000 00
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
-....|..+++.++.....|.|+|||.||.+|++.||+++|-+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 0124799999998888888999999999999999999988755
No 66
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.26 E-value=1.8e-06 Score=83.29 Aligned_cols=98 Identities=27% Similarity=0.435 Sum_probs=80.2
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHH
Q 002208 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVK 578 (953)
Q Consensus 499 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~ 578 (953)
-.|+.+.++||+|-+|||.+......-|+++||..- ..| -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------~qG--------------------------~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------YQG--------------------------ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------eec--------------------------hHhHHHHHH
Confidence 369999999999999999999999999999999521 111 235655555
Q ss_pred Hhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccCEeecCCC
Q 002208 579 KLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 628 (953)
Q Consensus 579 ~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaDivl~~~~ 628 (953)
.|.++ -.-|+++||..||.|+|++.+.++|+.++.+-.++.||+|+...+
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~G 143 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKG 143 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccC
Confidence 44432 456999999999999999999999999999999999999987654
No 67
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.25 E-value=9.8e-06 Score=88.99 Aligned_cols=66 Identities=27% Similarity=0.338 Sum_probs=50.9
Q ss_pred HHHHHHHHhcc----cC-CEEEEEcCCccCHHhhhhCCeeEEecCchHHHh----hcc-CEee--cCCCchhHHHHHH
Q 002208 572 HKYEIVKKLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----GAS-DIVL--TEPGLSVIISAVL 637 (953)
Q Consensus 572 ~K~~iV~~lq~----~g-~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~----~aa-Divl--~~~~~~~i~~ai~ 637 (953)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.+| .+| +.+. ..++-.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 44444444432 34 789999999999999999999999999999999 666 6776 4556677777764
No 68
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.24 E-value=1.2e-06 Score=90.26 Aligned_cols=92 Identities=24% Similarity=0.307 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH-H-
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE-H- 572 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~-~- 572 (953)
+++.+.|+.++++|++++++||+....+..+++.+|++........+.... +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 888899999999999999999999999999999999974211111110000 11235555555 4
Q ss_pred -HHHHHHHh------cccCCEEEEEcCCccCHHhhh
Q 002208 573 -KYEIVKKL------QERKHICGMTGDGVNDAPALK 601 (953)
Q Consensus 573 -K~~iV~~l------q~~g~~V~~~GDG~ND~paLk 601 (953)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 455889999999999999996
No 69
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.15 E-value=5.3e-06 Score=82.58 Aligned_cols=101 Identities=24% Similarity=0.319 Sum_probs=75.2
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCC-CCCCcc-------ccCcccccccCchhHHHHHHhcCc
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN-MYPSAS-------LLGQDKDASIAALPVEELIEKADG 564 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~v 564 (953)
+-|++++.++.|++.|.+|.++||--...+..+|.++||+.. .+.+.. ..|.+..+..
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt-------------- 154 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT-------------- 154 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc--------------
Confidence 569999999999999999999999999999999999999752 221111 1111111111
Q ss_pred EeecCHHHHHHHHHHhccc--CCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 565 FAGVFPEHKYEIVKKLQER--KHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 565 far~~P~~K~~iV~~lq~~--g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
+...-|.++++.+++. -..++|+|||+||.+|+.-||-=|+.+
T Consensus 155 ---sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 ---SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ---ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 1123688999999874 457899999999999999976666654
No 70
>PLN02954 phosphoserine phosphatase
Probab=98.06 E-value=2.4e-05 Score=83.12 Aligned_cols=131 Identities=21% Similarity=0.307 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+ ....... .....+ .+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~------~~~~~~--~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFD------ENEPTS--RS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECcc------CCCccc--CC
Confidence 378999999999999999999999999999999999999963 221110000000 0000000 000001 12
Q ss_pred HHHHHHHHHhccc--CCEEEEEcCCccCHHhhhh--CCeeEEecCc--hHHHhhccCEeecCCCchhHHH
Q 002208 571 EHKYEIVKKLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 571 ~~K~~iV~~lq~~--g~~V~~~GDG~ND~paLk~--AdVGIamg~~--t~~a~~aaDivl~~~~~~~i~~ 634 (953)
..|.+.++.+.++ ...+.|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 3466677666543 2568999999999999877 5666666532 2334556899884 4555443
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.02 E-value=1.4e-05 Score=82.17 Aligned_cols=113 Identities=17% Similarity=0.092 Sum_probs=75.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhH-HHHHHhcCcEee-c
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPV-EELIEKADGFAG-V 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~vfar-~ 568 (953)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+.... +... .-...+..++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~--~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFD--NDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceEC--CCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999999885321 1111 1111000 0000 000000001111 1
Q ss_pred CHHHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 569 FPEHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
....|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123589999999887 8899999999999999999987654
No 72
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.98 E-value=2.9e-05 Score=82.36 Aligned_cols=110 Identities=16% Similarity=0.150 Sum_probs=74.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCC-CCCCc-cccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN-MYPSA-SLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +... .+... .+.+......-+.....+ ....|
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~----~~~~~--- 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEH----CQNHC--- 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcccc----ccccC---
Confidence 68999999999999999999999999999999999888 6431 11101 111111000000000000 00001
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
...|..+++.++.....|.|+|||.||.+|.+.||+.++-
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1248889998888877899999999999999999997774
No 73
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.96 E-value=1.4e-05 Score=81.48 Aligned_cols=101 Identities=22% Similarity=0.278 Sum_probs=70.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..- +....... .+...... ...-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~--~~g~~~g~--------~~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFD--DNGLLTGP--------IEGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEEC--CCCEEeCc--------cCCcccCCcc
Confidence 3689999999999999999999999999999999999998631 11110000 00000000 0000124567
Q ss_pred HHHHHHHHhccc----CCEEEEEcCCccCHHhhhhC
Q 002208 572 HKYEIVKKLQER----KHICGMTGDGVNDAPALKKA 603 (953)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~A 603 (953)
.|...++.++++ ...+.++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999876
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.91 E-value=7.6e-05 Score=79.16 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=89.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ...+.+.... ...-.|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 458899999999999999999999999999999999999985321 1111111000 011123
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecC----chHHHhhccCEeecCCCchhHHHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~----~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
+--..+++.++.....+.++||+.||+.+.+.|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 33345666666666789999999999999999999 666642 2344455788887 667787776644
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.85 E-value=3.2e-05 Score=80.70 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=76.7
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
..+++|++.+.|+.+++.|+++.++||-....+..+++.+|+..- ......... +....+.. . --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~~--------~-~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGNI--------D-GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCCc--------c-CCCCC
Confidence 356899999999999999999999999999999999999998532 111111000 00000000 0 01234
Q ss_pred HHHHHHHHHHhcc-cC---CEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 570 PEHKYEIVKKLQE-RK---HICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 570 P~~K~~iV~~lq~-~g---~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
++.|.+.++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5778877766543 33 36899999999999999999999986
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.82 E-value=5.9e-05 Score=72.23 Aligned_cols=118 Identities=15% Similarity=0.064 Sum_probs=79.3
Q ss_pred ecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 488 ~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ....+........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhh-cccccccccccccccCC
Confidence 34468999999999999999999999999999999999999997421 0111100000000 00000000111123445
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhh-CCeeEE
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK-ADIGIA 608 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~-AdVGIa 608 (953)
-.|+.+..+.+.+......+.++||+.||.+|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 66777788888887777889999999999999998 555554
No 77
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.73 E-value=8.6e-05 Score=80.35 Aligned_cols=147 Identities=16% Similarity=0.164 Sum_probs=94.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCC--C-CC-ccc-cCc-c-cc----------------
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--Y-PS-ASL-LGQ-D-KD---------------- 547 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~-~~-~~l-~~~-~-~~---------------- 547 (953)
.+..|...++|+++++.|+.++..||......+.+.+++++..+. + .+ ..+ .++ . .+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456788999999999999999999999999999999999975431 1 00 000 000 0 00
Q ss_pred -----------------c-------ccCchh----H---HHHHHhc--Cc---Ee-----ecCH--HHHHHHHHHhccc-
Q 002208 548 -----------------A-------SIAALP----V---EELIEKA--DG---FA-----GVFP--EHKYEIVKKLQER- 583 (953)
Q Consensus 548 -----------------~-------~~~~~~----~---~~~~~~~--~v---fa-----r~~P--~~K~~iV~~lq~~- 583 (953)
. ....+. + .+.+... .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 000001 1 1111111 11 11 2333 3577777776543
Q ss_pred ---CCEEEEEcCCccCHHhhhh-CCeeEEecCchHHHhhccC-------EeecCCCchhHHHHHH
Q 002208 584 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARGASD-------IVLTEPGLSVIISAVL 637 (953)
Q Consensus 584 ---g~~V~~~GDG~ND~paLk~-AdVGIamg~~t~~a~~aaD-------ivl~~~~~~~i~~ai~ 637 (953)
...|+++||+.||.+|++. ++.||+|+|+.+..++.+| ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 7799999999998886543 5555555667777664
No 78
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.73 E-value=0.00021 Score=75.80 Aligned_cols=126 Identities=19% Similarity=0.214 Sum_probs=93.7
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
..++-|+++++++.|+++|++..++|++....+..+.+..|+.... ..+.|.+.. -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCC----------------CCCCcC
Confidence 4567899999999999999999999999999999999999997532 111111100 012235
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCC---eeEEecC--chHHHhhccCEeecCCCchhHHHHH
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~Ad---VGIamg~--~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
|+....+.+.+....+.++||||..||..|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 77777788887766558999999999999999998 6666663 4566676799998 4455655444
No 79
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.70 E-value=0.00021 Score=74.77 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+++++|++.|+++.++||.....+...-+.+|+.... ...+...+ ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCc-----------------CCCCCCChH
Confidence 67899999999999999999999999999899888999985321 11111000 011233344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-e--c--CchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-m--g--~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=..+++.++-..+.++|+||+.+|..+-++|++... + | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 4456666666566789999999999999999999643 3 3 22344566799987 4455555443
No 80
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.65 E-value=0.0002 Score=76.34 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=39.1
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34555679999999999999999999999999999999999853
No 81
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.50 E-value=0.00079 Score=71.34 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
+.+.++|++|+++|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34899999999999999999999999999999999985
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.44 E-value=0.00075 Score=74.08 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=83.3
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... ...+.+.... ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478899999999999999999999999998888888888885321 1111111000 011122
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecC----chHHHhhccCEeecCCCchhHHHHH
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~----~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+-=..+.+.+.-....+.|+||+.||..|.++|++ .+++.. ..+..+..+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 22234445554445679999999999999999998 445532 2233445789888 4566665443
No 83
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.43 E-value=0.00016 Score=77.55 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=54.8
Q ss_pred HHHHHHHHhccc-C---CEEEEEcCCccCHHhhhhCCeeEEecCchHHHhhccC----EeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD----IVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~~aaD----ivl~~~~~~~i~~ai~~ 638 (953)
.|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++-.++.++|.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 466666666543 2 3588999999999999999999999999999999999 77766666788887743
No 84
>PLN02382 probable sucrose-phosphatase
Probab=97.43 E-value=0.00061 Score=79.05 Aligned_cols=141 Identities=19% Similarity=0.172 Sum_probs=88.0
Q ss_pred HHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC---CCc--cccCc--------------------------
Q 002208 497 SAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY---PSA--SLLGQ-------------------------- 544 (953)
Q Consensus 497 v~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---~~~--~l~~~-------------------------- 544 (953)
..+++ +++++.|+..+..||.++.....+.++.++..+.+ .+. +..+.
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44555 88999999999999999999999999999865421 000 00000
Q ss_pred ---------cccc-------ccCchh-------HHHHHHh----cC------cEeecCHH--HHHHHHHHhccc------
Q 002208 545 ---------DKDA-------SIAALP-------VEELIEK----AD------GFAGVFPE--HKYEIVKKLQER------ 583 (953)
Q Consensus 545 ---------~~~~-------~~~~~~-------~~~~~~~----~~------vfar~~P~--~K~~iV~~lq~~------ 583 (953)
+.+. ..+... +.+.+.+ +. -+-.+.|. .|..-++.|.++
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 0000 000101 1111111 11 12244554 487777766543
Q ss_pred -CCEEEEEcCCccCHHhhhhCC-eeEEecCchHHHhhcc--------CEeec-CCCchhHHHHHH
Q 002208 584 -KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARGAS--------DIVLT-EPGLSVIISAVL 637 (953)
Q Consensus 584 -g~~V~~~GDG~ND~paLk~Ad-VGIamg~~t~~a~~aa--------Divl~-~~~~~~i~~ai~ 637 (953)
...|+++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +++-.+|..++.
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 347899999999999999999 6999999999888743 55544 334556666653
No 85
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.34 E-value=0.00085 Score=70.47 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... ...+.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999999999999999985321 1111111000 1112233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe---cCc--hHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV---ADA--TDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam---g~~--t~~a~~aaDivl~~~~~~~i~ 633 (953)
-=....+.++.....++|+||..||..|.++|++-... |.+ .+.....+|+++ +++..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 33444555555556799999999999999999987543 211 122234688877 3344443
No 86
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.34 E-value=0.001 Score=70.04 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=83.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+.... ...+ +.+.. -...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~-~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVI-TLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEE-ecCcC----------------CCCCCCcH
Confidence 37799999999999999999999999999999999999986421 1111 11100 01122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-e--cCc--hHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-m--g~~--t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
--.++.+.++.....++|+||+.+|..|-++|++-.. + |.. .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 4445566665555679999999999999999998432 2 311 223344688876 4566666544
No 87
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.17 E-value=0.00048 Score=75.32 Aligned_cols=131 Identities=10% Similarity=0.077 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHHHHh-cCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccc--Ccc-cccccC----------------
Q 002208 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL--GQD-KDASIA---------------- 551 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~--~~~-~~~~~~---------------- 551 (953)
.+-+++.++|++|++ .|+.++++||++........+.+++.---.+...+. +.. ....++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 899999999999999988887766420000000000 000 000000
Q ss_pred ------------------------chhHHHHH----HhcC--------cEeecCHH--HHHHHHHHhccc----CCEEEE
Q 002208 552 ------------------------ALPVEELI----EKAD--------GFAGVFPE--HKYEIVKKLQER----KHICGM 589 (953)
Q Consensus 552 ------------------------~~~~~~~~----~~~~--------vfar~~P~--~K~~iV~~lq~~----g~~V~~ 589 (953)
.+.+.++. +... .+-.+.|. +|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 01111111 1111 12233343 677666665433 357899
Q ss_pred EcCCccCHHhhhhC----CeeEEecCchHHHhhccCEeecC
Q 002208 590 TGDGVNDAPALKKA----DIGIAVADATDAARGASDIVLTE 626 (953)
Q Consensus 590 ~GDG~ND~paLk~A----dVGIamg~~t~~a~~aaDivl~~ 626 (953)
+||+.||.+|++.+ +.||+||++. ..|++.|.+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~ 232 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG 232 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC
Confidence 99999999999999 9999999875 357777754
No 88
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.13 E-value=0.002 Score=68.28 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=76.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-+|.|++.++++.|++.|+++.++|+........+.+++|+.... ...+.+... ...+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 467899999999999999999999999999999999999986432 111111100 0112223
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCc---hHHHhhccCEee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARGASDIVL 624 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~---t~~a~~aaDivl 624 (953)
+-=..+.+.+.-..+.|+|+||..||+.+-++|++.... ..+ .+.-...+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 209 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL 209 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec
Confidence 322333344433345699999999999999999987654 222 222223567766
No 89
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.09 E-value=0.0029 Score=66.84 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=81.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+....+-...+...+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 478999999999999999999999999999999999999986211111122111100 112223
Q ss_pred HHHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeE--EecCch---H-HHhhccCEeecCCCchhHHH
Q 002208 571 EHKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGI--AVADAT---D-AARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 571 ~~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGI--amg~~t---~-~a~~aaDivl~~~~~~~i~~ 634 (953)
+-=....+.+.-. ...++|+||+.+|+.+-++|++.. ++..|. + .....+|.++ +++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 3223344444433 367999999999999999999986 333322 1 2233577776 34444443
No 90
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.05 E-value=0.0082 Score=65.34 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=83.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----------CCccccCcccccccCchhHHHHHH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------PSASLLGQDKDASIAALPVEELIE 560 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~ 560 (953)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... ....+.|.. . .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~-----P------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-G-----P------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-C-----C-------
Confidence 4689999999999999999999999999999999999999853211 011111110 0 0
Q ss_pred hcCcEeecCHHHHHHHHH-----Hhc--ccCCEEEEEcCCccCHHhhhhC---CeeEEec--Cc-----hHHHhhccCEe
Q 002208 561 KADGFAGVFPEHKYEIVK-----KLQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARGASDIV 623 (953)
Q Consensus 561 ~~~vfar~~P~~K~~iV~-----~lq--~~g~~V~~~GDG~ND~paLk~A---dVGIamg--~~-----t~~a~~aaDiv 623 (953)
-+....|.+.+. .++ .....|.++|||.||++|..-. +--+.+| +. -+.=+++=|||
T Consensus 187 ------~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 187 ------LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred ------cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 000123544333 222 2345788999999999996544 2233444 32 23456788999
Q ss_pred ecCCCchhHHHHH
Q 002208 624 LTEPGLSVIISAV 636 (953)
Q Consensus 624 l~~~~~~~i~~ai 636 (953)
|.+|.=-.++.+|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9988766666655
No 91
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.98 E-value=0.0041 Score=66.38 Aligned_cols=122 Identities=15% Similarity=0.117 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... . .+.+.+. .....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~-~i~~~~~----------------~~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--A-VLIGGDT----------------LAERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--c-EEEecCc----------------CCCCCCCHH
Confidence 57899999999999999999999999998888888888875321 1 1111110 001223344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCc----h-HHHhhccCEeecCCCchhHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADA----T-DAARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~----t-~~a~~aaDivl~~~~~~~i~~ 634 (953)
-=..+++.+.-....+.|+||+.||..|-+.|++... +..| . ......+|+++ +++..+..
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~ 222 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWN 222 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHH
Confidence 4456666676666789999999999999999998743 3221 1 12234588888 34555543
No 92
>PRK11590 hypothetical protein; Provisional
Probab=96.96 E-value=0.0038 Score=65.83 Aligned_cols=107 Identities=12% Similarity=0.053 Sum_probs=75.2
Q ss_pred CCCCCHHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... ..+.+.+.+....+. . .-..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~----~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR----VNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc----CceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 578889999999999999999999999996210 011121111100000 0 0123567
Q ss_pred HHHHHHHHHh-cccCCEEEEEcCCccCHHhhhhCCeeEEecC
Q 002208 571 EHKYEIVKKL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 611 (953)
Q Consensus 571 ~~K~~iV~~l-q~~g~~V~~~GDG~ND~paLk~AdVGIamg~ 611 (953)
++|..-++.. .......-+-||..||.|||+.|+-++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8898877654 4445566789999999999999999999974
No 93
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.93 E-value=0.0044 Score=74.56 Aligned_cols=48 Identities=10% Similarity=0.079 Sum_probs=39.3
Q ss_pred EEeecCCC-CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 485 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 485 G~i~i~D~-lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
|.+.-.|. .-+.+.++|++|+++|+.+++.||........+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3357899999999999999999999999999999999974
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.89 E-value=0.0038 Score=65.79 Aligned_cols=107 Identities=12% Similarity=0.051 Sum_probs=74.4
Q ss_pred CCCCCHHHHHH-HHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++|++.++|+ .+++.|++++++|+=....+..+|+..|+... ..+.+.+.+.. ++ .. . .=..+.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~g---g~----~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NG---GW----V-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CC---ce----E-cCccCCC
Confidence 46899999996 78889999999999999999999999665321 01112211100 00 00 0 0123566
Q ss_pred HHHHHHHHHh-cccCCEEEEEcCCccCHHhhhhCCeeEEecC
Q 002208 571 EHKYEIVKKL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 611 (953)
Q Consensus 571 ~~K~~iV~~l-q~~g~~V~~~GDG~ND~paLk~AdVGIamg~ 611 (953)
++|.+-++.. .......-+-||..||.|||+.||-.+++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888877644 3334456789999999999999999999963
No 95
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.86 E-value=0.0066 Score=66.06 Aligned_cols=42 Identities=7% Similarity=0.022 Sum_probs=38.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999864
No 96
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.76 E-value=0.011 Score=64.61 Aligned_cols=96 Identities=15% Similarity=0.070 Sum_probs=65.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++-||+.++++.|++.|+++.++||.....+..+-+..|+.... ...++.+.+. ...+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcC-----------------CCCCCChH
Confidence 56799999999999999999999999998888877777764321 1111111110 01122333
Q ss_pred HHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCe
Q 002208 572 HKYEIVKKLQER-KHICGMTGDGVNDAPALKKADI 605 (953)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdV 605 (953)
-=....+.+.-. ...++|+||+.+|+.+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 333444444433 3569999999999999999997
No 97
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.72 E-value=0.0097 Score=64.84 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=79.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999999999985321 1222221110 1122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE-Ee-cCchHHHhhccCEeecC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI-am-g~~t~~a~~aaDivl~~ 626 (953)
-=...++.++-....++|+||..+|+.|-++|++-. ++ +..+......+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 334455555555667999999999999999999843 33 32222233357877643
No 98
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.71 E-value=0.011 Score=63.90 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=69.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+.... ...++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999998999886431 11122111100 1122344
Q ss_pred HHHHHHHHhccc-CCEEEEEcCCccCHHhhhhCCeeE
Q 002208 572 HKYEIVKKLQER-KHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
-=....+.+.-. .+.++|+||..+|..+-+.|++-.
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 334445555432 456999999999999999999753
No 99
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.71 E-value=0.015 Score=63.89 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+..... .++.+.+ +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 577999999999999999999999999999999999999854211 1111110 00 0122
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCc--hH--HHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA--TD--AARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~--t~--~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=..+++.++-....++|+||+.+|..+-++|++-... ..| +. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 22233344443455799999999999999999986432 222 22 2344689987 5566666544
No 100
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.68 E-value=0.003 Score=65.68 Aligned_cols=94 Identities=19% Similarity=0.107 Sum_probs=69.8
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+.... ...+.+. ++..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 4567788899999999999999999999999999999999986321 1111111 1112444
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhC
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 603 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~A 603 (953)
|+--..+.+.++-....|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 6655666777776677899999999999887765
No 101
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.53 E-value=0.018 Score=62.25 Aligned_cols=117 Identities=14% Similarity=0.129 Sum_probs=81.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+-....+..+-+++|+.... ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 47799999999999999999999999999999999999986421 1222222111 1122344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCc-h--HHHhhccCEeecCC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADA-T--DAARGASDIVLTEP 627 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~-t--~~a~~aaDivl~~~ 627 (953)
-=....+.++-....+.|+||..+|..|-++|++-.. +..+ . +.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 4455556666556779999999999999999998543 3222 1 22234688888554
No 102
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.42 E-value=0.011 Score=69.83 Aligned_cols=123 Identities=12% Similarity=0.098 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999999985321 1112111100 011232
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecC--chHHHhhccCEeecCCCchhHHHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARGASDIVLTEPGLSVIISAVLT 638 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~--~t~~a~~aaDivl~~~~~~~i~~ai~~ 638 (953)
-=....+.++ ...+.|+||..+|+.+-+.|++ .|++.. ..+.....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2222233332 3469999999999999999998 445532 2222234588887 456666665543
No 103
>PRK11587 putative phosphatase; Provisional
Probab=96.37 E-value=0.018 Score=60.98 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=75.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|++.|+++.++|+.....+...-+..|+... ...+.+.+. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHh-----------------cCCCCCcH
Confidence 5789999999999999999999999887766666666776321 111111000 01122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee-EEecCch-HHHhhccCEeecC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG-Iamg~~t-~~a~~aaDivl~~ 626 (953)
-=....+.+.-....+.|+||..+|+.+-+.|++- |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 33444555555567899999999999999999984 5564332 2233457777643
No 104
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.36 E-value=0.01 Score=61.93 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (953)
++.+++.++|++|++.|+++.++||........+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999988754
No 105
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.28 E-value=0.017 Score=61.02 Aligned_cols=100 Identities=19% Similarity=0.238 Sum_probs=68.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.++++.|++.|+++.++|+-+...+...-+++|+.... ..++.+.+. ....-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccC-----------------CCCCCCHH
Confidence 57899999999999999999999999888888888888885321 111111110 01122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCe-eEEec
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 610 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdV-GIamg 610 (953)
-=..+.+.+.-....+.|+||.. +|+.+-++|++ .|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22344455544456799999998 99999999997 44554
No 106
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.18 E-value=0.043 Score=56.45 Aligned_cols=142 Identities=20% Similarity=0.251 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccc-cccCch---------------hH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD-ASIAAL---------------PV 555 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~-~~~~~~---------------~~ 555 (953)
++-||+.++.+.|++. ...+++|--...-+..+|..+|++........+ +.+ ...+.+ +-
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~---~lD~~~~PeeeR~E~L~~~~~~~~~~g 158 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEV---DLDSIAVPEEEREELLSIIDVIASLSG 158 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccc---cCccccCChHHHHHHHHhcCccccccH
Confidence 3558999999999876 556677777778889999999985422111111 011 001111 11
Q ss_pred HHHHHhc-CcEeecCHHHHHHHHHHhccc------------------CCEEEEEcCCccCHHhhhhCC-e-eEEec-Cch
Q 002208 556 EELIEKA-DGFAGVFPEHKYEIVKKLQER------------------KHICGMTGDGVNDAPALKKAD-I-GIAVA-DAT 613 (953)
Q Consensus 556 ~~~~~~~-~vfar~~P~~K~~iV~~lq~~------------------g~~V~~~GDG~ND~paLk~Ad-V-GIamg-~~t 613 (953)
+++.++. ++|.|..|.+-.+|++..+.- ....+.+||.+.|+.||+.+. - |+|+. ||.
T Consensus 159 eelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 159 EELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 2222222 268888887655555555432 234688999999999999875 2 47887 888
Q ss_pred HHHhhccCEeecCCCchhHHHHHH
Q 002208 614 DAARGASDIVLTEPGLSVIISAVL 637 (953)
Q Consensus 614 ~~a~~aaDivl~~~~~~~i~~ai~ 637 (953)
+-|..-||+.+..++.......|+
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 888889999999998887777663
No 107
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.11 E-value=0.036 Score=69.48 Aligned_cols=170 Identities=19% Similarity=0.210 Sum_probs=97.2
Q ss_pred HHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEee--cCCCCCCCHHHHHHHHHh-cCCcEEEEcCCCHHHHHH
Q 002208 448 HAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLP--LFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 524 (953)
Q Consensus 448 ~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~--i~D~lR~~v~~~I~~l~~-aGI~v~miTGD~~~tA~~ 524 (953)
+.....|...-.|.+++-+.. +++.... -...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 444556655556777765543 3332211 012366889999999999 699999999999988887
Q ss_pred HHHHhCCCC---C---CC-CCccc---c----------------------Ccccc---cc------cCchhH--------
Q 002208 525 TGRRLGMGT---N---MY-PSASL---L----------------------GQDKD---AS------IAALPV-------- 555 (953)
Q Consensus 525 ia~~lGi~~---~---~~-~~~~l---~----------------------~~~~~---~~------~~~~~~-------- 555 (953)
....+++.- | .. +.... . |...+ .. ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 765555310 0 00 00000 0 00000 00 000111
Q ss_pred HHHHHh----c--Cc-----EeecCH--HHHHHHHHHhccc--CCEEEEEcCCccCHHhhhhC---CeeEEecCchHHHh
Q 002208 556 EELIEK----A--DG-----FAGVFP--EHKYEIVKKLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 617 (953)
Q Consensus 556 ~~~~~~----~--~v-----far~~P--~~K~~iV~~lq~~--g~~V~~~GDG~ND~paLk~A---dVGIamg~~t~~a~ 617 (953)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 01 112334 3688888777653 35799999999999999986 588888874 4
Q ss_pred hccCEeecCCCchhHHHHH
Q 002208 618 GASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 618 ~aaDivl~~~~~~~i~~ai 636 (953)
.+|++.|.++ ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788988754 3444443
No 108
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.11 E-value=0.016 Score=64.54 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=78.0
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
..+++.+++.+++++|++.|+++.++||.....+..+.+.+|+..... ..+.+.+. ....+.. ..--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~-~~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQRE-QGDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhccc-CCCCCC
Confidence 568999999999999999999999999999999999999998853111 11111110 0000000 001244
Q ss_pred CHHHHHHHHHHhcc-cCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 569 FPEHKYEIVKKLQE-RKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 569 ~P~~K~~iV~~lq~-~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
.|+-+...++.+-. .-..++|+||..||+.+-+.|++-..
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 57778888877644 34789999999999999999998743
No 109
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.09 E-value=0.02 Score=59.40 Aligned_cols=97 Identities=15% Similarity=0.130 Sum_probs=66.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+++++|++.|+++.++|+-+......+.+++|+.... ..++...+. ....-.|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~-----------------~~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADAV-----------------RAYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhhc-----------------CCCCCCHH
Confidence 57899999999999999999999998888888888999974321 111111100 01111222
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
-=..+.+.+.-....+.|+||+.+|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 223444555545567999999999999999988753
No 110
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.08 E-value=0.015 Score=62.29 Aligned_cols=89 Identities=19% Similarity=0.231 Sum_probs=62.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCC----HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~----~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
.|.+++.+.++.+++.|+++.++||.. ..|+..+.+..|+....+....+.+...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467889999999999999999999963 6699999999999422111111111100
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
.-.+|...++ +.| .+.|+||..+|..+-+.|++-
T Consensus 173 -~K~~K~~~l~---~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -GQYTKTQWLK---KKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCHHHHHH---hcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0123444433 334 489999999999999999875
No 111
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.07 E-value=0.01 Score=63.53 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=61.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
.|.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... . ..+.+.+... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f-~~i~~~d~~~------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--N-PVIFAGDKPG------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--e-eEEECCCCCC------------------C
Confidence 34555999999999999999999998 67799999999999631 1 1222211110 0
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
-.| +|.. .+++.| ++.|+||..||..+-+.|++-
T Consensus 173 ~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 1222 334444 479999999999999999874
No 112
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.04 E-value=0.027 Score=62.33 Aligned_cols=118 Identities=18% Similarity=0.116 Sum_probs=73.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+-+......+-+..+.......-..+.+.+. ....-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~-----------------~~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV-----------------PKKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc-----------------CCCCCCHH
Confidence 5789999999999999999999999887777666555432110000011111000 01222333
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCch--HHHhhccCEeecC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADAT--DAARGASDIVLTE 626 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~t--~~a~~aaDivl~~ 626 (953)
-=..+.+.+.-....++|+||+.+|+.|-++|++.... ..|. ......+|+++.+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 33455566655566799999999999999999987654 2332 1112357888743
No 113
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.99 E-value=0.018 Score=62.22 Aligned_cols=68 Identities=24% Similarity=0.278 Sum_probs=44.9
Q ss_pred HHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhCCeeEEecCchHH-----Hhh---ccCEee-cCCCchhHHHHHH
Q 002208 571 EHKYEIVKKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARG---ASDIVL-TEPGLSVIISAVL 637 (953)
Q Consensus 571 ~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~-----a~~---aaDivl-~~~~~~~i~~ai~ 637 (953)
..|..-|+.|+++ .+.|.++||+.||.+||..++-||.++|+.+. ... ...+.. ..+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4688888888765 23577799999999999999999999988877 222 223333 3444556666664
Q ss_pred H
Q 002208 638 T 638 (953)
Q Consensus 638 ~ 638 (953)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 114
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.94 E-value=0.0098 Score=59.56 Aligned_cols=97 Identities=19% Similarity=0.169 Sum_probs=70.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.|++.+.+++|++.|++++++|+-.........+++|+... ....+...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 46889999999999999999999999999999999999998621 11222111110 111223
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
+-=..+++.++-....+.++||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 333455666655667799999999999999998864
No 115
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.86 E-value=0.056 Score=55.37 Aligned_cols=127 Identities=20% Similarity=0.121 Sum_probs=72.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCccccCcccccccCchhHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVE 556 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~ 556 (953)
.+.||+.+++++|++.|+++.++|..... ....+-++.|+.. ...+...... .+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f----~~i~~~~~~~----~~--- 97 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL----DGIYYCPHHP----ED--- 97 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc----ceEEECCCCC----CC---
Confidence 36799999999999999999999987621 1112223345420 0111000000 00
Q ss_pred HHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCchH---HHhhcc--CEeecCCCch
Q 002208 557 ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADATD---AARGAS--DIVLTEPGLS 630 (953)
Q Consensus 557 ~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~t~---~a~~aa--Divl~~~~~~ 630 (953)
......-.|+--..+.+.+.-..+.+.|+||..+|+.+-++|++..- +..|.. .....+ |+++ +++.
T Consensus 98 -----~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 98 -----GCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred -----CCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00012233444455666666566789999999999999999997432 223321 112234 7776 4455
Q ss_pred hHHHHH
Q 002208 631 VIISAV 636 (953)
Q Consensus 631 ~i~~ai 636 (953)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 555544
No 116
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.74 E-value=0.018 Score=58.82 Aligned_cols=94 Identities=13% Similarity=0.034 Sum_probs=61.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ...+.+.+. ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997532 45667778875321 111111100 01122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
-=....+.+.-....+.|+||..+|+.+-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22344444444445699999999999999999874
No 117
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.67 E-value=0.038 Score=53.36 Aligned_cols=92 Identities=15% Similarity=0.143 Sum_probs=65.1
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhc
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 562 (953)
-++.|++.++++.|+++|+++.++|+.. ......+.+++|+.... ....+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-------------------
Confidence 3678999999999999999999999988 77788888888874211 00100
Q ss_pred CcEeecCHHHHHHHHHHhc-ccCCEEEEEcC-CccCHHhhhhCCe
Q 002208 563 DGFAGVFPEHKYEIVKKLQ-ERKHICGMTGD-GVNDAPALKKADI 605 (953)
Q Consensus 563 ~vfar~~P~~K~~iV~~lq-~~g~~V~~~GD-G~ND~paLk~AdV 605 (953)
.+.+-.|+-=..+.+.++ -....++|+|| -.+|+.+-++|++
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 011122333335556663 55677999999 5999999998876
No 118
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.65 E-value=0.035 Score=59.07 Aligned_cols=102 Identities=10% Similarity=0.019 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+.... ..++.+.+.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeeeCC-----------------CCCCCHH
Confidence 57899999999999999999999998888888877778874321 1111111100 0111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee--EEecCc
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG--IAVADA 612 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG--Iamg~~ 612 (953)
-=....+.+.-....++|+||..+|+.+-+.|++. +++.++
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 22333455554556799999999999999999996 455443
No 119
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.63 E-value=0.045 Score=55.64 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=64.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988777 5555568874311 111111100 11222344
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI 605 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV 605 (953)
-=..+.+.+......+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 4445556665556789999999999999998877
No 120
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.63 E-value=0.043 Score=57.89 Aligned_cols=120 Identities=12% Similarity=0.062 Sum_probs=75.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.|++.+.+++|++. +++.++|+-....+..+-+++|+.... ..++...+. ...+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-----------------CCCCCCHH
Confidence 5789999999999999 999999999888888888999985421 111111110 01112222
Q ss_pred HHHHHHHHh-cccCCEEEEEcCCc-cCHHhhhhCCe-eEEec--CchHHHhhccCEeecCCCchhHH
Q 002208 572 HKYEIVKKL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARGASDIVLTEPGLSVII 633 (953)
Q Consensus 572 ~K~~iV~~l-q~~g~~V~~~GDG~-ND~paLk~AdV-GIamg--~~t~~a~~aaDivl~~~~~~~i~ 633 (953)
-=...++.+ .-....+.|+||.. +|+.+=+++++ +|.+. ..+......+|+++ ++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~ 221 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELY 221 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHH
Confidence 223444555 43445799999998 89999999997 34443 22222223456665 3344443
No 121
>PRK06769 hypothetical protein; Validated
Probab=95.54 E-value=0.04 Score=56.16 Aligned_cols=99 Identities=10% Similarity=-0.000 Sum_probs=61.9
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCc
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADG 564 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 564 (953)
+-||+++++++|++.|+++.++|+.... .....-+..|+..-... ....+.+ ..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~~-----------------~~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC-PHKHGDG-----------------CE 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC-cCCCCCC-----------------CC
Confidence 6799999999999999999999987631 12222334555321000 0000000 00
Q ss_pred EeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 565 FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 565 far~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
..+-.|+-=.++.+.+...-+.+.|+||..+|+.+=++|++-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 122334434555666655556799999999999999999986553
No 122
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.47 E-value=0.074 Score=60.69 Aligned_cols=115 Identities=17% Similarity=0.144 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||.... ..++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985321 1111111100 1122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe-cCchHHH-hhccCEeec
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADATDAA-RGASDIVLT 625 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam-g~~t~~a-~~aaDivl~ 625 (953)
-=....+.++-....++|+||..+|+.|-+.|++-... ..+.+.. ...+|+++.
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR 332 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC
Confidence 33455666666677899999999999999999985433 3332222 235788763
No 123
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.43 E-value=0.022 Score=56.84 Aligned_cols=111 Identities=14% Similarity=0.060 Sum_probs=70.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
.++|+-++.++.+++.++.++++|+-..-....+=.+++=-..++.......... ......-.++.. .....-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~---ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDY---IHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCce---EcCCCceeeecC---CccccCC
Confidence 4789999999999999999999998876666666655551111111111100000 000000000000 1123345
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
+|...|+.+++..+.+.|+|||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 7999999999999999999999999988887776655
No 124
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.27 E-value=0.034 Score=56.76 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=61.7
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
-++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+..-. ..++.+.... ...-.|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~~~-----------------~~kp~~ 145 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADEVK-----------------EGKPHP 145 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhhCC-----------------CCCCCh
Confidence 368899999999999999999999987 5567777788875311 1111110000 111112
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
+-=..+.+.+.-..+.+.|+||..+|+.+-++|++.
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 211233444444445688999999999999999874
No 125
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.25 E-value=0.098 Score=52.44 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=65.8
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCccccCcccccccCchhHHHHHHh
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSASLLGQDKDASIAALPVEELIEK 561 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 561 (953)
+|.+.|++++++++++++|+++..+||.....+. ....++ | +.. ...+..... .+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~-------~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDR-------LFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCc-------chhh-hhc
Confidence 4778999999999999999999999999988774 444442 2 321 011110000 0000 000
Q ss_pred cCcEeecCHHHHHHHHHHhcc-----cCCEEEEEcCCccCHHhhhhCCee
Q 002208 562 ADGFAGVFPEHKYEIVKKLQE-----RKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 562 ~~vfar~~P~~K~~iV~~lq~-----~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
.+..+-.-+.|.+.++.+++ ....++..||+.+|+.+-++++|-
T Consensus 93 -e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11222222347777777665 457788999999999999987653
No 126
>PLN02940 riboflavin kinase
Probab=95.21 E-value=0.069 Score=61.60 Aligned_cols=114 Identities=17% Similarity=0.154 Sum_probs=73.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH-HhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+.... ..++.+.+. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 467999999999999999999999998887776554 56764211 111111100 0112233
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE-ecCc--hHHHhhccCEee
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARGASDIVL 624 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa-mg~~--t~~a~~aaDivl 624 (953)
+-=..+++.+.-..+.|.|+||+.+|+.+-++|++... +..+ .......+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 33345555555556779999999999999999998743 3332 222333456654
No 127
>PTZ00174 phosphomannomutase; Provisional
Probab=95.19 E-value=0.013 Score=63.24 Aligned_cols=54 Identities=22% Similarity=0.272 Sum_probs=46.4
Q ss_pred HHHHHHHHHhcccCCEEEEEcC----CccCHHhhhhC-CeeEEecCchHHHhhccCEee
Q 002208 571 EHKYEIVKKLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARGASDIVL 624 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GD----G~ND~paLk~A-dVGIamg~~t~~a~~aaDivl 624 (953)
-+|..-++.|.+....|+++|| |.||.+||+.| -.|++++++++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 3688888888777788999999 99999999987 688888899999998876654
No 128
>PRK09449 dUMP phosphatase; Provisional
Probab=94.92 E-value=0.11 Score=54.88 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++.|+ .|+++.++|+.....+...-++.|+.... ..++.+.+. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECcc-----------------CCCCCCHH
Confidence 47899999999999 68999999998888888877888874311 111111100 01111232
Q ss_pred HHHHHHHHhccc-CCEEEEEcCCc-cCHHhhhhCCee-EEec-CchH-HHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~~~GDG~-ND~paLk~AdVG-Iamg-~~t~-~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=..+++.+.-. ...+.|+||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 223444555432 35799999998 799999999985 4443 2221 1112467776 4455555443
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.53 E-value=0.089 Score=53.60 Aligned_cols=108 Identities=8% Similarity=-0.044 Sum_probs=68.1
Q ss_pred EeecCCCCCCCHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCc
Q 002208 486 LLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADG 564 (953)
Q Consensus 486 ~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 564 (953)
...-.-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+...- . ...+....+ ..+
T Consensus 39 ~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~---~------------~~~~~~~Fd-~iv 102 (174)
T TIGR01685 39 KSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG---K------------TVPMHSLFD-DRI 102 (174)
T ss_pred CCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC---C------------cccHHHhce-eee
Confidence 33344568899999999999999999999965 888898888888874100 0 000000000 001
Q ss_pred EeecCHHHH--HHHHHHhccc------CCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 565 FAGVFPEHK--YEIVKKLQER------KHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 565 far~~P~~K--~~iV~~lq~~------g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
.+.-.+..| ..+.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 111111111 2344544432 35799999999999999999886654
No 130
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.52 E-value=0.091 Score=51.92 Aligned_cols=100 Identities=17% Similarity=0.122 Sum_probs=60.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCcccccccCchhHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVE 556 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~ 556 (953)
++.|++.++++.|++.|+++.++|..+. .....+.+.+|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4789999999999999999999998662 34556677788742100000 0000000
Q ss_pred HHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 557 ELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 557 ~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
.....-.|+-=..+++.+.-..+.+.|+||...|+.+-+.|++-.
T Consensus 97 ------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000111122223334444444567999999999999999887743
No 131
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.34 E-value=0.21 Score=50.96 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCC-CCCc-cccCcccccccCchhH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNM-YPSA-SLLGQDKDASIAALPV 555 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~-~~~~-~l~~~~~~~~~~~~~~ 555 (953)
+.|++.+++++|+++|+++.++|.-... ....+-.+.|+.-.. +... ...+.. ++
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~--------~~ 98 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVE--------EF 98 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccc--------cc
Confidence 5689999999999999999999976531 111222233332100 0000 000000 00
Q ss_pred HHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCee--EEecCch---HHHhhccCEeec
Q 002208 556 EELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG--IAVADAT---DAARGASDIVLT 625 (953)
Q Consensus 556 ~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG--Iamg~~t---~~a~~aaDivl~ 625 (953)
. ....+..-.|+-=....+.+.-....+.|+||..+|+.+-++|++. |.+..|. ......+|+++.
T Consensus 99 ~----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 99 R----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred c----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 0 0000111223332344444444456789999999999999999995 3443332 122234788873
No 132
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.26 E-value=0.12 Score=53.65 Aligned_cols=95 Identities=14% Similarity=0.084 Sum_probs=60.6
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ..++...+. .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57799999999999999999999976554 46667777774221 111111000 01112232
Q ss_pred HHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCee
Q 002208 572 HKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIG 606 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVG 606 (953)
-=..+++.+.-....++|+||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22334444444456799999997 899998888753
No 133
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.08 E-value=0.14 Score=52.07 Aligned_cols=110 Identities=11% Similarity=0.097 Sum_probs=72.3
Q ss_pred HHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHhCCC
Q 002208 454 YAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMG 532 (953)
Q Consensus 454 ~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 532 (953)
+.+.|.+.+.+-... ++. ..=...+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~--~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLV--YPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccc--cCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788888776432 111 00123578999999999999999999999987 57777888888763
Q ss_pred CCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCee
Q 002208 533 TNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIG 606 (953)
Q Consensus 533 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVG 606 (953)
.. .+ ...-.|+-=..+.+.+.-....++|+||.. .|..+-+.|++-
T Consensus 85 ~~-------~~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL-------PH---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-------cC---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 11 00 001112211233344443455699999998 799999999884
No 134
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.98 E-value=0.082 Score=52.31 Aligned_cols=91 Identities=22% Similarity=0.218 Sum_probs=59.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
+..+++.+.++.|++.|+++.++|+-....+...-+.. +... ...++ +.+ ++...-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~-~~~-----------------~~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLIL-GSD-----------------EFGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEE-ecC-----------------CCCCCcCHH
Confidence 34579999999999999999999999988888877775 3221 11111 110 011122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 604 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~Ad 604 (953)
-=..+.+.+.-.. .++|+||..+|+.+-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 3334444444445 7999999999999888764
No 135
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.54 E-value=0.16 Score=51.16 Aligned_cols=101 Identities=13% Similarity=-0.014 Sum_probs=60.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVE 556 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~ 556 (953)
++-|++.+++++|++.|+++.++|.- .......+-+.+|+.-+ ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCC----CC---
Confidence 46689999999999999999999974 23455666777777410 111110000 00
Q ss_pred HHHHhcCc-EeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 557 ELIEKADG-FAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 557 ~~~~~~~v-far~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
+. +..-.|+-=..+++.+.-....+.|+||+.+|..+-++|++-...
T Consensus 98 ------~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------NCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 00 111112211233333333345699999999999999999886543
No 136
>PLN02811 hydrolase
Probab=92.93 E-value=0.25 Score=52.25 Aligned_cols=101 Identities=13% Similarity=0.099 Sum_probs=59.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHH-HHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKE-TGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~-ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.||+.+.|+.|++.|+++.++||-....... .-+..|+... ....+.+.+.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhh---------------ccCCCCCc
Confidence 577999999999999999999999987653332 2222233210 01111111000 00011122
Q ss_pred HHHHHHHHHhc---ccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 571 EHKYEIVKKLQ---ERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 571 ~~K~~iV~~lq---~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
+-=...++.+. -..+.+.|+||...|+.|-++|++-...
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 22234444443 3346799999999999999999986543
No 137
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.72 E-value=0.16 Score=50.31 Aligned_cols=98 Identities=14% Similarity=0.014 Sum_probs=65.5
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
.-++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+... ....++.+.+ +.+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d-------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDE-------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcc-------------------ccccC
Confidence 3457999999999998 5799999999999999999999987431 1111121111 01111
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
|. =.+..+.+......|.|+||..+|..+-++|.|-|..
T Consensus 102 P~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 21 0111233444456899999999999998888665543
No 138
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.46 E-value=0.47 Score=51.73 Aligned_cols=87 Identities=15% Similarity=0.080 Sum_probs=57.1
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---AKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
..++-|++.+.++.+++.|+++.++|+..... +...-++.|+..... .. ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--d~-----------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--EH-----------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--ce-----------------------EEe
Confidence 35678999999999999999999999977433 334456677753110 11 122
Q ss_pred ecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhh
Q 002208 567 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALK 601 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk 601 (953)
|-....|..-.+.+.+.-.+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 11112344445555555668999999999986543
No 139
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.40 E-value=0.72 Score=60.14 Aligned_cols=127 Identities=15% Similarity=0.136 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
.+-||+.+.++.|+++|+++.++|+-....+..+-++.|+..... ...+...+.. ...-.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~~~-----------------~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADAFE-----------------NLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcccc-----------------cCCCCHH
Confidence 367999999999999999999999999888888888899852111 1111111100 1112233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEecCc---hHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIamg~~---t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
-=....+.+.-....+.|+||..+|+.|-+.|++ -|++..+ .+.....+|+++.+..--++...+
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 3334556665556779999999999999999998 3444322 233445678888554333344443
No 140
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.37 E-value=0.41 Score=51.04 Aligned_cols=103 Identities=20% Similarity=0.289 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHH--HhcCCcEEEEcCCCHHHHHHHHHHhCCCCCC---CCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNM---YPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 492 ~lR~~v~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
|+.|+.++.++.+ ++.|+.+.++|-=|..--..+=+.-|+.... +.+....... ..+.-... ....|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~--G~l~v~py-----h~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDAD--GRLRVRPY-----HSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCC--ceEEEeCc-----cCCCCC
Confidence 5778999999999 5689999999999988888888888885321 1111110000 00000000 012355
Q ss_pred ecCH-HHHHHHHHHhccc----C---CEEEEEcCCccCH-Hhhh
Q 002208 567 GVFP-EHKYEIVKKLQER----K---HICGMTGDGVNDA-PALK 601 (953)
Q Consensus 567 r~~P-~~K~~iV~~lq~~----g---~~V~~~GDG~ND~-paLk 601 (953)
++.| .=|..+++.+++. | ..|.++|||.||- |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 5555 4799999988765 4 6899999999995 5553
No 141
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=92.30 E-value=0.65 Score=46.21 Aligned_cols=110 Identities=13% Similarity=0.163 Sum_probs=75.1
Q ss_pred HHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 450 IIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 450 ~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
..+.+..+|.+.+.+-..+ +++..= ....-|++.+=+.+++.+|+++.++|.-++.-+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998875543 333221 1335578888899999999999999999999999999999
Q ss_pred CCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhc---ccCCEEEEEcCCc-cCHHhhhhCCe
Q 002208 530 GMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQ---ERKHICGMTGDGV-NDAPALKKADI 605 (953)
Q Consensus 530 Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq---~~g~~V~~~GDG~-ND~paLk~AdV 605 (953)
|++-- +--..|-- ..+-++++ -.-+.|+|+||-. .|+-+=+.|++
T Consensus 84 ~v~fi------------------------------~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 84 GVPFI------------------------------YRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred CCcee------------------------------ecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 98520 11111221 13344444 4456899999996 67776666654
No 142
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.25 E-value=1.1 Score=48.17 Aligned_cols=94 Identities=16% Similarity=0.218 Sum_probs=59.2
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHH--HHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhc
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 562 (953)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. ...+++|+..+. ...++... ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s~---------~~------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISSG---------EI------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEccH---------HH-------
Confidence 555566788999999999999999999999985544333 455778875311 11111100 00
Q ss_pred CcEeecCHHHHHHHHHHhcc---cCCEEEEEcCCccCHHhhhhCC
Q 002208 563 DGFAGVFPEHKYEIVKKLQE---RKHICGMTGDGVNDAPALKKAD 604 (953)
Q Consensus 563 ~vfar~~P~~K~~iV~~lq~---~g~~V~~~GDG~ND~paLk~Ad 604 (953)
. ..-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 80 -------~--~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------A--VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------H--HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0 0112222222 3567999999999999886543
No 143
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.14 E-value=0.35 Score=54.83 Aligned_cols=101 Identities=10% Similarity=-0.040 Sum_probs=60.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPV 555 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~ 555 (953)
-+|.|++.+++++|+++|+++.++|+- ....+..+.+..|+.. ...+.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC----cc--
Confidence 467899999999999999999999982 1334555666777631 1111110000 00
Q ss_pred HHHHHhcCcEee-cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEE
Q 002208 556 EELIEKADGFAG-VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 608 (953)
Q Consensus 556 ~~~~~~~~vfar-~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIa 608 (953)
+..+| ..|+-=..+.+.+.-....+.|+||+.+|..+-+.|++-..
T Consensus 99 -------~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 -------NCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -------cCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00111 11221122333333345679999999999999998887543
No 144
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=91.46 E-value=0.46 Score=50.41 Aligned_cols=99 Identities=14% Similarity=0.086 Sum_probs=66.3
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhC---CCCCCCCCccccCcccccccCchhHHHHHHhcCcEe
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSASLLGQDKDASIAALPVEELIEKADGFA 566 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 566 (953)
.-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +... . ...+ + ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f-~~~f-----d--------------~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-F-SGYF-----D--------------TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-c-ceEE-----E--------------eCccc
Confidence 35789999999999999999999999988776666655542 2110 0 0000 0 00111
Q ss_pred ecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 567 GVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 567 r~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2233333455666655556799999999999999999986544
No 145
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.16 E-value=0.8 Score=44.10 Aligned_cols=93 Identities=11% Similarity=0.052 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|.. . .. .+ +.+.... .+.++-.|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~-~----~i-~~-----------l~~~f~~-~~~~~~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDF-G----II-FP-----------LAEYFDP-LTIGYWLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcccc-c----cc-hh-----------hHhhhhh-hhhcCCCc
Confidence 68999999999999999999999999 787777776766610 0 00 00 0000000 01111113
Q ss_pred --HHHHHHHHHhc--ccCCEEEEEcCCccCHHhhhh
Q 002208 571 --EHKYEIVKKLQ--ERKHICGMTGDGVNDAPALKK 602 (953)
Q Consensus 571 --~~K~~iV~~lq--~~g~~V~~~GDG~ND~paLk~ 602 (953)
+.=....+.+. -....++|+||...|..++++
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 32234444554 445789999999988777654
No 146
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=90.99 E-value=0.24 Score=53.35 Aligned_cols=63 Identities=21% Similarity=0.221 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhccc----CCEEEEEcCCccCHHhhhhC--------CeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 570 PEHKYEIVKKLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 570 P~~K~~iV~~lq~~----g~~V~~~GDG~ND~paLk~A--------dVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+...+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 44566666555432 45799999999999999999 4788886342 4567899885 444454444
No 147
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.84 E-value=0.76 Score=46.49 Aligned_cols=93 Identities=8% Similarity=-0.009 Sum_probs=57.1
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCH------------HHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHH
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE 560 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 560 (953)
+-||+.+++++|+++|+++.++|.-.. .....+-+.+|+.. ...+.+.. .
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~-~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHA-G------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCC-C-------------
Confidence 348999999999999999999996543 23456677788742 11111110 0
Q ss_pred hcCcEeecCHHHHHHHHHHhc--ccCCEEEEEcCCc--------cCHHhhhhCCee
Q 002208 561 KADGFAGVFPEHKYEIVKKLQ--ERKHICGMTGDGV--------NDAPALKKADIG 606 (953)
Q Consensus 561 ~~~vfar~~P~~K~~iV~~lq--~~g~~V~~~GDG~--------ND~paLk~AdVG 606 (953)
.+..-.|+-=..+.+.+. -....+.||||.. +|..+-++|++-
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 011111222233444443 2345699999986 699988888764
No 148
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.71 E-value=0.29 Score=51.25 Aligned_cols=98 Identities=14% Similarity=0.041 Sum_probs=58.6
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHH--HHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
-++.|++.+.++.|++.|+++.++|...... ........|+.... ..++...+ .....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-----------------~~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--DAVVESCL-----------------EGLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--CEEEEeee-----------------cCCCCC
Confidence 3678999999999999999999999865432 22222223332110 00110000 001122
Q ss_pred CHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 569 FPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 569 ~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
.|+-=..+.+.+.-....++|+||...|+.+=++|++-.
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 233323444555544566999999999999999998843
No 149
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=90.60 E-value=0.5 Score=50.20 Aligned_cols=87 Identities=22% Similarity=0.269 Sum_probs=54.2
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHH---HHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
-|+-|++.+.++.+++.|++|+++||........+ =++.|...- ....+.+.. + . ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~-d-----~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLE-D-----S------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCC-C-----C------------Cc
Confidence 47889999999999999999999999997552222 234565421 111111100 0 0 00
Q ss_pred cCHHHHHHHHHHhcccCC-EEEEEcCCccCH
Q 002208 568 VFPEHKYEIVKKLQERKH-ICGMTGDGVNDA 597 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~-~V~~~GDG~ND~ 597 (953)
-.-+-|.+.-+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 011226666666666654 778999999885
No 150
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=90.11 E-value=1.7 Score=45.07 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.9
Q ss_pred CHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 496 ~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
.+...+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888889886
No 151
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.28 E-value=1 Score=46.74 Aligned_cols=97 Identities=10% Similarity=0.010 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
++.|++.++++.|++.|+++.++|.-+.......- +..++.... ..++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEeccc-----------------CCCCCCH
Confidence 47899999999999999999999987655433221 112332110 001110000 0011122
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
+-=..+.+.+.-....+.|+||...|+.+-++|++-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2223445555555567999999999999999998854
No 152
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=89.07 E-value=0.9 Score=47.90 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=63.3
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||++++++.| ++++.++|+.....+...=++.|+.... ...++.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4668999999988 4999999999888888777778875321 11111111000 0111233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
-=....+.+.-..+.|+|+||..+|+.+=++|++....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33344444444445699999999999999999987753
No 153
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=89.05 E-value=1.7 Score=55.30 Aligned_cols=37 Identities=8% Similarity=0.029 Sum_probs=31.3
Q ss_pred CCCCCHHHHHHHH-HhcCCcEEEEcCCCHHHHHHHHHH
Q 002208 492 PPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGRR 528 (953)
Q Consensus 492 ~lR~~v~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 528 (953)
.|-+++.+++++| ++.|+.|.++||.+..+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667899999997 788999999999999888776644
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=87.83 E-value=1.9 Score=44.77 Aligned_cols=110 Identities=16% Similarity=0.170 Sum_probs=66.2
Q ss_pred CCCCCHHHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHhCCCCC---CC--CCccccCcccccccCchhHHHHHHhcCcE
Q 002208 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTN---MY--PSASLLGQDKDASIAALPVEELIEKADGF 565 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~---~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 565 (953)
|.-|+..++|+.+++.|- .++++|--|.--...+-+..|+..- +. |...=..+.+.-.... .-.-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH--------~~hsC 155 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH--------TQHSC 155 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC--------CCCcc
Confidence 567999999999999997 9999999887777777777776320 00 1000000000000000 00224
Q ss_pred eecCHH-HHHHHHHHhcccC-------CEEEEEcCCccCH-HhhhhCCeeEEe
Q 002208 566 AGVFPE-HKYEIVKKLQERK-------HICGMTGDGVNDA-PALKKADIGIAV 609 (953)
Q Consensus 566 ar~~P~-~K~~iV~~lq~~g-------~~V~~~GDG~ND~-paLk~AdVGIam 609 (953)
.++.|. =|..++..++..+ ..+..+|||.||. |+++...--+||
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 454443 3666666554321 2789999999994 888877666666
No 155
>PLN02580 trehalose-phosphatase
Probab=86.66 E-value=0.87 Score=52.11 Aligned_cols=61 Identities=23% Similarity=0.221 Sum_probs=43.0
Q ss_pred HHHHHHHHhccc-C-----C-EEEEEcCCccCHHhhhh-----CCeeEEecCchHHHhhccCEeecCCCchhHHHHH
Q 002208 572 HKYEIVKKLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARGASDIVLTEPGLSVIISAV 636 (953)
Q Consensus 572 ~K~~iV~~lq~~-g-----~-~V~~~GDG~ND~paLk~-----AdVGIamg~~t~~a~~aaDivl~~~~~~~i~~ai 636 (953)
+|..-|+.+-+. | . .++++||+.||..|++. +++||+|++|... ..|++.|.+ -..+...+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HHHHHHHH
Confidence 787777766543 2 1 35899999999999996 6899999876543 357888754 34444444
No 156
>PLN02645 phosphoglycolate phosphatase
Probab=85.64 E-value=2 Score=48.17 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=39.1
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (953)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977777776 456663
No 157
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=85.24 E-value=1.3 Score=45.23 Aligned_cols=98 Identities=12% Similarity=0.074 Sum_probs=64.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.+++.+++++|+ .++.++|.-....+...-+++|+.... ..++...+.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF--DGIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh--CeEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999997 479999999888889999999985321 111111100000 000122333
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeE
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 607 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGI 607 (953)
-=..+++.+......++|+||...|+.+=++|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 334556666666678999999999999988887643
No 158
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=85.06 E-value=2.1 Score=43.76 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=61.6
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHH
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHK 573 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K 573 (953)
-| ..++++.|++. ++..++||.....+..+-++.|+.... ..++...+. ...+-.|+-=
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~ 148 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTF 148 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHH
Confidence 35 46899999865 899999999999999999999985321 111211110 0112223333
Q ss_pred HHHHHHhcccCCEEEEEcCCccCHHhhhhCCee
Q 002208 574 YEIVKKLQERKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 574 ~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
....+.++.....|.++||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444555554455688999999999999999874
No 159
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=84.97 E-value=2.4 Score=42.85 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=74.3
Q ss_pred HHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCc--EEEEcCC-------CHHHHHH
Q 002208 454 YAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIAKE 524 (953)
Q Consensus 454 ~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 524 (953)
+.+.|.|.+.+-..+- + ...=++.+-|+..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDNT-------------L--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNT-------------L--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCCC-------------C--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 6678888887754431 0 0123577889999999999999875 9999986 4788999
Q ss_pred HHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHHHHHHHHHHhccc-----CCEEEEEcCCc-cCHH
Q 002208 525 TGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQER-----KHICGMTGDGV-NDAP 598 (953)
Q Consensus 525 ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~-----g~~V~~~GDG~-ND~p 598 (953)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+.++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 02223565556777777654 56799999974 5665
Q ss_pred hhhhCC
Q 002208 599 ALKKAD 604 (953)
Q Consensus 599 aLk~Ad 604 (953)
+=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 544433
No 160
>PLN03017 trehalose-phosphatase
Probab=83.59 E-value=13 Score=42.33 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=30.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia 526 (953)
.+-++..++|++|. .|+.+.++||..........
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 36688999999999 78999999999999888873
No 161
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=83.50 E-value=2.3 Score=47.78 Aligned_cols=95 Identities=16% Similarity=0.052 Sum_probs=68.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH----hCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
++.+++.++++.|++.|+++.++|.-+...|..+-++ +|+..... .+ .+.-.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~---~~---------------------~~~~~ 86 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD---AR---------------------SINWG 86 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee---EE---------------------EEecC
Confidence 4578999999999999999999999999999998887 66642110 00 00011
Q ss_pred cCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEec
Q 002208 568 VFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVA 610 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg 610 (953)
-.|+.=.++.+.+.-.-..++|+||...|..+.+.+..++.+-
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2233334445555444578999999999999999998887553
No 162
>PHA02597 30.2 hypothetical protein; Provisional
Probab=80.03 E-value=4.4 Score=41.82 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=54.5
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCC--CCCccccCcccccccCchhHHHHHHhcCcEeecC
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--YPSASLLGQDKDASIAALPVEELIEKADGFAGVF 569 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (953)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+.... +-...+.+.. . ...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------------~-~~k 132 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------------D-ESK 132 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc-------------------C-ccc
Confidence 47899999999999875 56777764444444344556653210 0011111100 0 011
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhC--CeeEE
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA--DIGIA 608 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~A--dVGIa 608 (953)
|+--..+++.++ ...++|+||..+|+.+-++| ++-..
T Consensus 133 p~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 133 EKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred HHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 332223334443 34688999999999999999 88543
No 163
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=78.27 E-value=1.3 Score=40.84 Aligned_cols=48 Identities=21% Similarity=0.281 Sum_probs=35.2
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (953)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 444556778899999999999999999999998855555554 456664
No 164
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=74.61 E-value=50 Score=43.01 Aligned_cols=20 Identities=30% Similarity=0.386 Sum_probs=10.4
Q ss_pred CcEEEEcCCCcccccEEEEe
Q 002208 155 GDIISIKLGDIIPADARLLE 174 (953)
Q Consensus 155 GDiV~l~~Gd~IPaD~~ll~ 174 (953)
|-...+...|.+|-|.++++
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~ 193 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLS 193 (941)
T ss_pred CEEEEEeHHHCCCCCEEEEC
Confidence 44455555555555555553
No 165
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=73.15 E-value=17 Score=36.28 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=67.9
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHH---HHHh-----CCCCCCCCCccccCcccccccCchhHHHHHHhc
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRL-----GMGTNMYPSASLLGQDKDASIAALPVEELIEKA 562 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~l-----Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 562 (953)
|..++++.+..+++++.|++++-+|+....-|..+ -.+. +++.. ..+. +...+-..+ ..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~--------sP~~l~~al-~r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLL--------SPDSLFSAL-HR 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEE--------CCcchhhhh-hc
Confidence 79999999999999999999999999986544333 2222 33211 1111 111111110 11
Q ss_pred CcEeecCHHHHHHHHHHhcc-----cCCEEEEEcCCccCHHhhhhCCee
Q 002208 563 DGFAGVFPEHKYEIVKKLQE-----RKHICGMTGDGVNDAPALKKADIG 606 (953)
Q Consensus 563 ~vfar~~P~~K~~iV~~lq~-----~g~~V~~~GDG~ND~paLk~AdVG 606 (953)
++..+-.-+.|....+.++. ....++..|...+|+.+-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 23445455678888888875 356789999999999999987664
No 166
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=72.33 E-value=10 Score=40.11 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=73.4
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFP 570 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (953)
.++.||+.+.++.|++.|+.+.+.|+-....+..+-+.+|+.... ...+.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 578999999999999999999999999999999999999986421 1111111110 112334
Q ss_pred HHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 571 EHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 571 ~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
+-=..-.+.|.-....|..+.|..|.+.|-++|+.-+-.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 544555566555667899999999999999999976644
No 167
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=71.23 E-value=5.5 Score=42.56 Aligned_cols=90 Identities=21% Similarity=0.202 Sum_probs=54.7
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHH---HHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG 567 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 567 (953)
+|+=|++.+.++.+++.|++|..|||.+.. ....--++.|.... ....+.+..... ..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~-----------------~~ 174 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS-----------------KK 174 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS-----------------S-
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc-----------------cc
Confidence 355588999999999999999999998753 22233345565321 111111100000 00
Q ss_pred cCHHHHHHHHHHhcccC-CEEEEEcCCccCHHh
Q 002208 568 VFPEHKYEIVKKLQERK-HICGMTGDGVNDAPA 599 (953)
Q Consensus 568 ~~P~~K~~iV~~lq~~g-~~V~~~GDG~ND~pa 599 (953)
...+-|...-+.++++| ++++++||-.+|...
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 01234777778888775 578999999999775
No 168
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=70.72 E-value=8.5 Score=39.80 Aligned_cols=48 Identities=23% Similarity=0.326 Sum_probs=42.3
Q ss_pred EEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 482 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 482 ~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
.+-|.+.++|..-|++.|++++|++++.+|+.+|.-..+.-..+.+++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 567999999999999999999999999999999988877777766653
No 169
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=70.19 E-value=15 Score=43.77 Aligned_cols=98 Identities=17% Similarity=0.062 Sum_probs=62.0
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-hCCCCCCCC------CccccCcccccccCchhHHHHHHhcCcE
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYP------SASLLGQDKDASIAALPVEELIEKADGF 565 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~vf 565 (953)
+++++.+ .+++.|. ++++|+=....+..+|++ +|++.-.-. ...++|.-.. -
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 5555554 4456774 599999999999999987 898621000 1111111000 0
Q ss_pred eecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecC
Q 002208 566 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVAD 611 (953)
Q Consensus 566 ar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~ 611 (953)
..+.-++|.+-++..........+-||..||.|||+.||-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134467877776433211223689999999999999999999975
No 170
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=69.45 E-value=9.6 Score=40.79 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=55.2
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++-||+.++++.|++. +++.++|.-+... +..|+.... ..++...+.. ...-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF--EFVLRAGPHG-----------------RSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh--ceeEecccCC-----------------cCCCcHH
Confidence 4668999999999875 8999999865431 456663211 0111110000 0011122
Q ss_pred HHHHHHHHhcccCCEEEEEcCC-ccCHHhhhhCCeeEEe
Q 002208 572 HKYEIVKKLQERKHICGMTGDG-VNDAPALKKADIGIAV 609 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG-~ND~paLk~AdVGIam 609 (953)
-=....+.+.-....+.||||. ..|+.+=++|++-...
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 2223344444445679999999 5999999999876543
No 171
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=68.90 E-value=21 Score=38.89 Aligned_cols=31 Identities=13% Similarity=0.320 Sum_probs=27.6
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHH
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~ 520 (953)
..|+=|++.+..+.+++.|++|..+||....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3567789999999999999999999999864
No 172
>PRK10444 UMP phosphatase; Provisional
Probab=68.87 E-value=4.9 Score=43.45 Aligned_cols=45 Identities=20% Similarity=0.288 Sum_probs=40.3
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
|.+.-.+.+-|++.++|+.|++.|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888888875
No 173
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=68.43 E-value=19 Score=37.82 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=60.1
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++-+++.++++++++. +++.++|--....+....+++||.... ..++...+ +....|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~F--d~v~~s~~-------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYF--DAVFISED-------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhh--heEEEecc-------------------cccCCCC
Confidence 4568899999999988 999999987777788888999975321 11111100 1122232
Q ss_pred HH--HHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCe-eEEec
Q 002208 572 HK--YEIVKKLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 610 (953)
Q Consensus 572 ~K--~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdV-GIamg 610 (953)
.+ ....+.+.-....++|+||.. ||+..-++++. +|-+.
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 22 344445544466799999975 88444444444 44443
No 174
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=67.50 E-value=1.2e+02 Score=39.45 Aligned_cols=272 Identities=17% Similarity=0.109 Sum_probs=152.7
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCcccccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 002208 18 LERIPIEEVFEQLKCT-REGLSSTEGANRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGEGKPPD 96 (953)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~il~~~ail~~~l~~~~~~~~~ 96 (953)
..-++.+|+.++++.. .+.+..++-....++ ++.+|...|...+...-.+.+.+..+.... .+
T Consensus 42 ~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 42 TTGLSEEEVKRRLKKYGPNELPEEKKRSLLKK------------FLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred ccCCCHHHHHHHHhhcCCccccccccCcHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 4456678888887743 344443333333333 344455545444444444445554443111 24
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeE------EE----EECCeEEEEEccCcCCCcEEEEcCCCcc
Q 002208 97 WQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKT------KL----LRDGKWSEEEAAILVPGDIISIKLGDII 166 (953)
Q Consensus 97 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~------~V----~RdG~~~~i~~~~Lv~GDiV~l~~Gd~I 166 (953)
+.....++++..+...+.-++..++-++++++.......- .+ +.-|....+.+.|.+|-|..+++..+ .
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-L 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-c
Confidence 4455555566666668888888888888887766544322 22 34588999999999999999999887 4
Q ss_pred cccEEEEecCCeEEeecC--CCCCCeeEe---c---CCCCcccccceeeeceEEEEEEEecchhHHHHHHHhhhccCCCC
Q 002208 167 PADARLLEGDPLKVDQSA--LTGESLPVT---K---NPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 238 (953)
Q Consensus 167 PaD~~ll~g~~l~Vdes~--LTGEs~pv~---K---~~g~~v~~Gs~v~~G~~~~vVi~tG~~T~~gki~~l~~~~~~~~ 238 (953)
=+|=-.|.|++.-|+=-. .++|..|.. + ..|..+.+|+-..--...|.-+.-|..+..-+..... .++-..
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~-~t~l~~ 263 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEV-KTPLQR 263 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcccccc-CCcHHH
Confidence 555555656543332221 122333332 3 3477788777443334455566666655443322111 122122
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 002208 239 HFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307 (953)
Q Consensus 239 ~lq~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~~ 307 (953)
.+.+....+..+++++.++..+...+.........+..++.-++++.--+.|.-+-+++.+....=+++
T Consensus 264 ~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 264 KLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 344555555555444433333333332122123456677778888888899999888888877764433
No 175
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=67.39 E-value=10 Score=38.09 Aligned_cols=86 Identities=13% Similarity=0.032 Sum_probs=53.8
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeecCHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPE 571 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~~P~ 571 (953)
++.||+.++++ ++.++|.-+.......-+++|+.... ..++.+.+ .....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-----------------~~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDT-----------------VRAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhh-----------------cCCCCCCHH
Confidence 57899999998 36788988888888888888875321 01111110 001122233
Q ss_pred HHHHHHHHhcccCCEEEEEcCCccCHHhhhhC
Q 002208 572 HKYEIVKKLQERKHICGMTGDGVNDAPALKKA 603 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~A 603 (953)
-=....+.+.-....++|+||...|+.+-+++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 22445555555556799999999998776653
No 176
>PLN02423 phosphomannomutase
Probab=67.31 E-value=7.4 Score=41.95 Aligned_cols=42 Identities=26% Similarity=0.294 Sum_probs=35.6
Q ss_pred HHHHHHHHhcccCCEEEEEcC----CccCHHhhhh-CCeeEEecCchH
Q 002208 572 HKYEIVKKLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 614 (953)
Q Consensus 572 ~K~~iV~~lq~~g~~V~~~GD----G~ND~paLk~-AdVGIamg~~t~ 614 (953)
+|..-++.|+ ....|+++|| |-||.+||+. -=.||.+.+-.|
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 6889999999 7778999999 8999999997 778999864443
No 177
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=66.94 E-value=6.9 Score=42.53 Aligned_cols=48 Identities=25% Similarity=0.392 Sum_probs=36.5
Q ss_pred EEeecCCC----CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHH---HHHHhCCC
Q 002208 485 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIAKE---TGRRLGMG 532 (953)
Q Consensus 485 G~i~i~D~----lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~---ia~~lGi~ 532 (953)
|.+.-.+. +=|++.++|++|+++|+++.++||....+... .-+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555565 78899999999999999999999987665433 34455664
No 178
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=66.23 E-value=10 Score=40.92 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=39.3
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (953)
|.+.-.+.+=|++.++|++|++.|++++++|| .......+..+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45555567778999999999999999999996 6677777777788874
No 179
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=65.80 E-value=9.3 Score=42.04 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=37.7
Q ss_pred CC-CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 493 lR-~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
+| |++.+++++|+++|+++.+.|+-....+.+.-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999888888889999999974
No 180
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=64.39 E-value=27 Score=38.38 Aligned_cols=48 Identities=23% Similarity=0.225 Sum_probs=35.6
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHH---HHHhCCC
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRLGMG 532 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~lGi~ 532 (953)
|.+.-.+.+=|++.++|++|++.|+++..+||....+...+ -+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45555677788999999999999999999999764433332 3456764
No 181
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=63.35 E-value=11 Score=41.52 Aligned_cols=41 Identities=5% Similarity=-0.057 Sum_probs=36.5
Q ss_pred CC-CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 493 lR-~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
+| |++.+++++|+++|+++.++|+-....+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999777777888999999963
No 182
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=63.13 E-value=19 Score=36.95 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhc------CcEe
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKA------DGFA 566 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~vfa 566 (953)
+.+++.++++.++++|++++|+|-= -||....++...+.. ...-..+.+... ..+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~-------~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDK-------LHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHH-------HHHHHHHHHHHcCCccceEEEC
Confidence 5689999999999999999999963 355443322221100 000011111111 1234
Q ss_pred ecCHHH--------HHHHHHHhcccC---CEEEEEcCCccCHHhhhhCCeeEEe
Q 002208 567 GVFPEH--------KYEIVKKLQERK---HICGMTGDGVNDAPALKKADIGIAV 609 (953)
Q Consensus 567 r~~P~~--------K~~iV~~lq~~g---~~V~~~GDG~ND~paLk~AdVGIam 609 (953)
--.|++ ..-+.+.+++.+ ....||||-..|..+-..|+++ .+
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 334442 234445555543 6788999999999999999888 54
No 183
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=62.56 E-value=2.2e+02 Score=30.64 Aligned_cols=53 Identities=23% Similarity=0.204 Sum_probs=45.4
Q ss_pred CCCCCcEEEEEeecCCCCCCCHHHHHHHHHhc---CCcEEEEcCCCHHHHHHHHHH
Q 002208 476 SPGGPWQFVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 528 (953)
Q Consensus 476 ~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 528 (953)
....+|.=+=+++=.+-+.||..++|+.++.. |..|+-.+-|++..|++++.-
T Consensus 88 ~~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 88 ALGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred HhCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34567777788887788999999999999999 999997888889999998765
No 184
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=60.22 E-value=1.2e+02 Score=38.63 Aligned_cols=191 Identities=16% Similarity=0.113 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEe-cCCeEEeecC
Q 002208 106 LLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLE-GDPLKVDQSA 184 (953)
Q Consensus 106 ~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~-g~~l~Vdes~ 184 (953)
++++..+...+.-++..++.+++.++...... .+.-++-|....+...|.+|-|.++++ |+.+-+|=-.
T Consensus 61 i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~----------~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~v 130 (755)
T TIGR01647 61 ILGLLLLNATIGFIEENKAGNAVEALKQSLAP----------KARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRL 130 (755)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCC----------eEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEE
Confidence 33444444555666666777777665332111 112234588899999999999999996 4445566666
Q ss_pred CCCCCeeEecCC--CCc----ccccceeeeceEEEEEEEecchhHHHHHH---HhhhccCCCCcHHHHHHHHHHHHHHHH
Q 002208 185 LTGESLPVTKNP--GDE----VFSGSTCKQGEIEAVVIATGVHTFFGKAA---HLVDSTNQVGHFQKVLTAIGNFCICSI 255 (953)
Q Consensus 185 LTGEs~pv~K~~--g~~----v~~Gs~v~~G~~~~vVi~tG~~T~~gki~---~l~~~~~~~~~lq~~~~~i~~~~~~~i 255 (953)
+.|+..-+.-.. |+- -..|..+..|+...-=..++.-+..|.-. ++.+.-++..+-...+.+....+...+
T Consensus 131 i~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~ 210 (755)
T TIGR01647 131 FEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFL 210 (755)
T ss_pred EecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHH
Confidence 666644444322 332 13466666665332211222222222111 011111111111112233222222222
Q ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 002208 256 AVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (953)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~~~~~~ 306 (953)
+...++..++.+..........+...+...++..-.+.|.+++++...+..
T Consensus 211 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la 261 (755)
T TIGR01647 211 IVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMA 261 (755)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHH
Confidence 222222222233222111223455566677777788899999998887764
No 185
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=58.63 E-value=21 Score=38.82 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHh-----cCcEeecC
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEK-----ADGFAGVF 569 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~vfar~~ 569 (953)
++..++++.|++.|++..+.|+.............|+. .+-..+.. ...+..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999887644332222222211 11111111 11123334
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCc-cCHHhhhhCCeeEE-ecCch---H---HHhhccCEeecCCCchhHHH
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGV-NDAPALKKADIGIA-VADAT---D---AARGASDIVLTEPGLSVIIS 634 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk~AdVGIa-mg~~t---~---~a~~aaDivl~~~~~~~i~~ 634 (953)
|+-=..+.+.+......++|+||.. +|+.+-+.+++--. +..|. + .....+|+++ +++..+..
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~ 252 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVD 252 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHH
Confidence 4433445555555567899999996 89999999987543 33331 1 1223467776 44555544
No 186
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=58.26 E-value=34 Score=38.78 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=65.1
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh-C-------CCCCCCCCccccCcccc----------------cc
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL-G-------MGTNMYPSASLLGQDKD----------------AS 549 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l-G-------i~~~~~~~~~l~~~~~~----------------~~ 549 (953)
-|++++.+++|+++|+++.++|+-....+..+.+.+ | +..- -..++.+..+. ..
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y--FD~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY--FDVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh--CcEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 479999999999999999999999999999999986 6 2211 11122111110 00
Q ss_pred cCchhHHHHHHhcCcEeecCHHHHHHHHHHhcccCCEEEEEcCCc-cCHHhhh-hCC
Q 002208 550 IAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGV-NDAPALK-KAD 604 (953)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~-ND~paLk-~Ad 604 (953)
+....... ++.-.||++=+-. .+-+.+...+..|+++||-. .|+-.-+ .++
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 00011111 2233455544433 45566677789999999986 6776665 443
No 187
>PF05975 EcsB: Bacterial ABC transporter protein EcsB; InterPro: IPR010288 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family consists of several bacterial ABC transporter proteins which are homologous to the EcsB protein of Bacillus subtilis. EcsB is thought to encode a hydrophobic protein with six membrane-spanning helices in a pattern found in other hydrophobic components of ABC transporters [].
Probab=57.67 E-value=3.5e+02 Score=31.21 Aligned_cols=22 Identities=14% Similarity=0.264 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002208 643 FQRMKNYTIYAVSITIRIVFGF 664 (953)
Q Consensus 643 ~~~i~~~i~~~l~~ni~~~~~~ 664 (953)
.+.+.||..|.+--++.+++.+
T Consensus 13 ~k~~~kYlr~v~ndh~~l~l~~ 34 (386)
T PF05975_consen 13 WKEQLKYLRYVFNDHFVLYLIF 34 (386)
T ss_pred HHHHHHHHHHHhccHHHHHHHH
Confidence 4455567777765555444433
No 188
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.79 E-value=45 Score=37.06 Aligned_cols=140 Identities=16% Similarity=0.149 Sum_probs=80.4
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------cc
Q 002208 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS-------------------AS 540 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~~ 540 (953)
+.++++++.++.|+.+++.|++. .++-||+++.. +..|+++||....... ..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 45678888999999998888874 45668887654 3457778885421100 00
Q ss_pred ccC----ccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCC-cc
Q 002208 541 LLG----QDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDG-VN 595 (953)
Q Consensus 541 l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG-~N 595 (953)
+.| .+... .++...+..+......|.=+||.-=.++++...- .|..|+++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 000 00000 1112222333333344566788877777776643 49999999997 43
Q ss_pred C---HHhhhhCCeeEEec-C--c-hHHHhhccCEeecCCC
Q 002208 596 D---APALKKADIGIAVA-D--A-TDAARGASDIVLTEPG 628 (953)
Q Consensus 596 D---~paLk~AdVGIamg-~--~-t~~a~~aaDivl~~~~ 628 (953)
= +.+|.+++.-+.+- . . ...+-..||+|++-=+
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVG 211 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecC
Confidence 3 34566777777663 1 1 2223347899886543
No 189
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=54.29 E-value=16 Score=36.82 Aligned_cols=90 Identities=28% Similarity=0.394 Sum_probs=61.0
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCHH----HHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEeec
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGV 568 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~~----tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 568 (953)
|++=+++.|..-++.|=++..+||..+. +++..|+...|. ++.+ .+|++-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcc-------------------------eeeccC
Confidence 5667888999999999999999999863 556666666662 2211 124444
Q ss_pred CHH-HHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCe-eEEe
Q 002208 569 FPE-HKYEIVKKLQERKHICGMTGDGVNDAPALKKADI-GIAV 609 (953)
Q Consensus 569 ~P~-~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdV-GIam 609 (953)
.|. .++.-...+|+++ +-..-||.-||+.|-|.|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 331 1233345556555 45588999999999999876 5544
No 190
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=53.37 E-value=34 Score=41.14 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcCCCH------------HHHHHHHHHhCCC
Q 002208 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 532 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 532 (953)
+-|++++++++|++.|+++.++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 3466777777764
No 191
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=52.68 E-value=62 Score=34.86 Aligned_cols=134 Identities=16% Similarity=0.162 Sum_probs=67.8
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHHhcCcEee--c
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAG--V 568 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~ 568 (953)
-.+|+++.+.++.|++.+|.+.+.|+-=-....++=++-|...+. ..+..+...-.-++ ....|-. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~g--------~l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDEDG--------VLVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TTS--------BEEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCcc--------eEeecCCCce
Confidence 468999999999999999999999977766677777776654321 11111100000000 0000000 0
Q ss_pred CHHHHHH-------HHHHhcccCCEEEEEcCCccCHHhhhhC---CeeEEec--Cc-----hHHHhhccCEeecCCCchh
Q 002208 569 FPEHKYE-------IVKKLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARGASDIVLTEPGLSV 631 (953)
Q Consensus 569 ~P~~K~~-------iV~~lq~~g~~V~~~GDG~ND~paLk~A---dVGIamg--~~-----t~~a~~aaDivl~~~~~~~ 631 (953)
-+-.|.+ .-+.++. ...|...||..-|+.|-.-. +.-+.+| +. -+.=+++=||||.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0011111 1223333 45788999999999998755 4444445 32 2344567899999987555
Q ss_pred HHHHH
Q 002208 632 IISAV 636 (953)
Q Consensus 632 i~~ai 636 (953)
++.+|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 192
>PRK00208 thiG thiazole synthase; Reviewed
Probab=51.85 E-value=3.4e+02 Score=29.31 Aligned_cols=54 Identities=24% Similarity=0.209 Sum_probs=45.6
Q ss_pred CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhc---CCcEEEEcCCCHHHHHHHHHH
Q 002208 475 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 528 (953)
Q Consensus 475 ~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 528 (953)
|..+.+|.=+=+++=.+-+.||..++|+.++.. |..|+-.+-|++..|++++.-
T Consensus 87 e~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 87 EALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred HHhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 344677888888887888899999999999999 999997778888889888765
No 193
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=50.87 E-value=14 Score=35.50 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=28.6
Q ss_pred CCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHH
Q 002208 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA 522 (953)
+++.+++.++++++++.|++++.+||.+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67889999999999999999999999987543
No 194
>PTZ00174 phosphomannomutase; Provisional
Probab=47.42 E-value=23 Score=38.19 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=30.0
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 002208 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (953)
Q Consensus 492 ~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia 526 (953)
++-+.+.++|+++++.|+++++.||++........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 47788999999999999999999999988554433
No 195
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=47.19 E-value=5.4e+02 Score=33.33 Aligned_cols=26 Identities=12% Similarity=0.059 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhhcccchHHHHHHHH
Q 002208 276 DGIDNLLVLLIGGIPIAMPTVLSVTM 301 (953)
Q Consensus 276 ~~~~~~l~llv~~iP~aLp~~~~i~~ 301 (953)
.++..+++..-.+.|.++++++..+.
T Consensus 289 ~al~l~v~~iP~~Lp~~vt~~la~g~ 314 (867)
T TIGR01524 289 FALAVAVGLTPEMLPMIVSSNLAKGA 314 (867)
T ss_pred HHHHHHHHhCcchHHHHHHHHHHHHH
Confidence 34444455555555555555555544
No 196
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=46.81 E-value=20 Score=36.01 Aligned_cols=44 Identities=18% Similarity=0.179 Sum_probs=38.8
Q ss_pred ecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCC
Q 002208 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (953)
Q Consensus 488 ~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (953)
.+.=..||++.+.+++|.+. +++.+.|--....|..+.+.++..
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 33446899999999999988 999999999999999999999864
No 197
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=46.79 E-value=36 Score=33.35 Aligned_cols=50 Identities=20% Similarity=0.402 Sum_probs=27.7
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHhhcccccccccchHhHHHHHHHHHHHHHHHHHH
Q 002208 784 LERPGLLLVTAFVIAQLVATLIAVYANWGFARIKGVGWGWAGVIWLYSIVFYVPLDV 840 (953)
Q Consensus 784 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (953)
.++| +|+++.+++.+...++..|. +..|.+|.|.++++++....++..|+
T Consensus 33 ~~HP--~L~~~M~~~y~~~~~lm~~s-----py~G~~s~~~ftv~fv~m~~~llfDI 82 (155)
T PF10777_consen 33 RNHP--YLCLAMYAAYLAVAALMYYS-----PYFGLGSVWGFTVFFVVMAAFLLFDI 82 (155)
T ss_pred HhCc--HHHHHHHHHHHHHHHHHHhc-----chhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 4567 67788777766544443442 23344666666655555555555553
No 198
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=46.38 E-value=19 Score=34.07 Aligned_cols=39 Identities=28% Similarity=0.406 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHHhcCCc-EEEEcCCCHHHHHHHHHHhCC
Q 002208 493 PRHDSAETIRRALNLGVN-VKMITGDQLAIAKETGRRLGM 531 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~-v~miTGD~~~tA~~ia~~lGi 531 (953)
+.+.+++.+++|.+.|++ +|+.+|...+.+.+.|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 456789999999999997 999999999999999999887
No 199
>PTZ00445 p36-lilke protein; Provisional
Probab=46.26 E-value=34 Score=35.85 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEE--EeecCCC----------CCCCHHHHHHHHHhcCCcE
Q 002208 444 KKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVG--LLPLFDP----------PRHDSAETIRRALNLGVNV 511 (953)
Q Consensus 444 ~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG--~i~i~D~----------lR~~v~~~I~~l~~aGI~v 511 (953)
.+.....++.+.+.|.|++++-... ++++ .=|--+| ++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3455666778899999999886543 3332 0012233 7999999999999999999
Q ss_pred EEEcCCCH
Q 002208 512 KMITGDQL 519 (953)
Q Consensus 512 ~miTGD~~ 519 (953)
.++|=-..
T Consensus 95 ~VVTfSd~ 102 (219)
T PTZ00445 95 SVVTFSDK 102 (219)
T ss_pred EEEEccch
Confidence 99995443
No 200
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=44.11 E-value=5.5e+02 Score=33.39 Aligned_cols=28 Identities=11% Similarity=0.019 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHH
Q 002208 275 RDGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (953)
Q Consensus 275 ~~~~~~~l~llv~~iP~aLp~~~~i~~~ 302 (953)
..++..+++..-.+.|.++++++..+..
T Consensus 321 ~~aisl~V~~~Pe~Lp~~vt~~La~g~~ 348 (903)
T PRK15122 321 LFALAVAVGLTPEMLPMIVSSNLAKGAI 348 (903)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 3445555556666666666666665543
No 201
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=41.65 E-value=28 Score=38.03 Aligned_cols=46 Identities=22% Similarity=0.214 Sum_probs=40.0
Q ss_pred EEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHh
Q 002208 484 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (953)
Q Consensus 484 lG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (953)
=|.+.--+.+=|++.++|++|+++|++++.+|.-...+....++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4778888899999999999999999999999999888777666554
No 202
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.43 E-value=73 Score=35.42 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=75.3
Q ss_pred cCCCCCCCHHHHHHHHHhc-CCcE---EEEcCCCHHH------HHHHHHHhCCCCCCCC--Cc-----------------
Q 002208 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------AKETGRRLGMGTNMYP--SA----------------- 539 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~a-GI~v---~miTGD~~~t------A~~ia~~lGi~~~~~~--~~----------------- 539 (953)
+.++++++.++.++.+++. |++. .++-||++.. ....|+++||....+. ..
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~ 89 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADP 89 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888876 7764 4556887654 3455778888532110 00
Q ss_pred cccC----ccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhc--ccCCEEEEEcC-Cc
Q 002208 540 SLLG----QDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQ--ERKHICGMTGD-GV 594 (953)
Q Consensus 540 ~l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq--~~g~~V~~~GD-G~ 594 (953)
.+.| ..... .++...+..+..+...|.=+||.-=.++++... -.|..|+++|- +.
T Consensus 90 ~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~ 169 (296)
T PRK14188 90 AIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNL 169 (296)
T ss_pred CCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcc
Confidence 0000 00000 111112222332333456677876666666654 35999999994 43
Q ss_pred cC---HHhhhhCCeeEEecC----chHHHhhccCEeecC
Q 002208 595 ND---APALKKADIGIAVAD----ATDAARGASDIVLTE 626 (953)
Q Consensus 595 ND---~paLk~AdVGIamg~----~t~~a~~aaDivl~~ 626 (953)
-= +..|.+++.-+.+-+ ..+.+-..||+|+.-
T Consensus 170 mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 170 VGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred hHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 33 344566777776642 223333478988764
No 203
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=40.75 E-value=1e+03 Score=31.61 Aligned_cols=214 Identities=16% Similarity=0.219 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEe---cCCeE
Q 002208 103 IVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLE---GDPLK 179 (953)
Q Consensus 103 i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~---g~~l~ 179 (953)
-++++++..+...+.-++.+++.++|++ +.. ......+ ++-|....+...|.+|-|.++++ |+.+-
T Consensus 196 ~~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iP 264 (1054)
T TIGR01657 196 SLCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMP 264 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEec
Confidence 3444555566666777777888777654 322 1111222 35688999999999999999997 55555
Q ss_pred EeecCCCCCCeeEecC--CCCcc--cc--------c------------ceeeeceEEEEEEEe-cchhHHHHHHHhhhcc
Q 002208 180 VDQSALTGESLPVTKN--PGDEV--FS--------G------------STCKQGEIEAVVIAT-GVHTFFGKAAHLVDST 234 (953)
Q Consensus 180 Vdes~LTGEs~pv~K~--~g~~v--~~--------G------------s~v~~G~~~~vVi~t-G~~T~~gki~~l~~~~ 234 (953)
+|=-.+.|+ .-|.=. .|+-. .. | ..+..|.....+... |. |.....+-.+
T Consensus 265 aD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~----g~~~~vV~~T 339 (1054)
T TIGR01657 265 CDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGD----TGCLAIVVRT 339 (1054)
T ss_pred ceEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCC----CcEEEEEEeC
Confidence 666666774 222221 13321 11 1 113334322221111 11 1111122222
Q ss_pred C---CCCcHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhcccchHHHHHHHH
Q 002208 235 N---QVGHFQ----------KVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 301 (953)
Q Consensus 235 ~---~~~~lq----------~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~i~~ 301 (953)
. ..+.+. ...++-...++..+++..++.+++.+ .........+...+...+..+=.+.|.++++++
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~-~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTI-IELIKDGRPLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHH
Confidence 1 122222 22233322233222222222222221 111111122334444556667778899999999
Q ss_pred HHHHHHHhhCCccccchhHHHhhcCceEEecCCCCCCCCCceEE
Q 002208 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 345 (953)
Q Consensus 302 ~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v 345 (953)
.++.. .+.-.|.+-.++|.+-.---|-|+.++
T Consensus 419 ti~l~------------~~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 419 SIGIN------------NSLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHHH------------HHHHHHHHCCEEEcCcccceecceeeE
Confidence 98863 345677788899999888888887766
No 204
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=40.37 E-value=1.5e+02 Score=35.53 Aligned_cols=148 Identities=20% Similarity=0.181 Sum_probs=84.5
Q ss_pred ECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEecCCeEEeecCCCCCCeeEecCCCCcccccceeeece---------
Q 002208 140 RDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGE--------- 210 (953)
Q Consensus 140 RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~l~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~--------- 210 (953)
+-|....+...|.+|-|.+.++. ..=+|--.+.|++.-+.-. .|+. -..|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 45888999999999999998866 4445666666655433332 1443 25678888888755322
Q ss_pred EEEEEEEecchhHHHHHHHhhhccCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh--ccccchHHHHHHHHHHHHh
Q 002208 211 IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL-TAIGNFCICSIAVGMLVEIIVMYP--IQHRKYRDGIDNLLVLLIG 287 (953)
Q Consensus 211 ~~~vVi~tG~~T~~gki~~l~~~~~~~~~lq~~~-~~i~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~llv~ 287 (953)
..+.++++|.+|. ..-.....+.. ..+..+.+.+.++..+......+. .+...+..++..++...-+
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 2233455666542 11011222222 333333322222212222222221 1234566778888888899
Q ss_pred hcccchHHHHHHHHHHHH
Q 002208 288 GIPIAMPTVLSVTMAIGS 305 (953)
Q Consensus 288 ~iP~aLp~~~~i~~~~~~ 305 (953)
++|.++|+++..+.....
T Consensus 195 aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLA 212 (499)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 999999999988877655
No 205
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=39.70 E-value=4.2e+02 Score=34.91 Aligned_cols=70 Identities=13% Similarity=0.205 Sum_probs=39.0
Q ss_pred HHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec-CCeEEeecCCCCCCeeE
Q 002208 114 SFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG-DPLKVDQSALTGESLPV 192 (953)
Q Consensus 114 ~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g-~~l~Vdes~LTGEs~pv 192 (953)
..+.-+...++.+++.+....... + +.=++-|-...+...|.+|-|.++++. +.+-.|=-.+.|++.-+
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~-----~-----~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~V 187 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQ-----Q-----ALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKV 187 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC-----e-----eEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEE
Confidence 334455556666666654322111 1 111244777888888888888888853 33445555565654333
Q ss_pred e
Q 002208 193 T 193 (953)
Q Consensus 193 ~ 193 (953)
.
T Consensus 188 d 188 (997)
T TIGR01106 188 D 188 (997)
T ss_pred E
Confidence 3
No 206
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=39.67 E-value=4.2e+02 Score=29.86 Aligned_cols=53 Identities=21% Similarity=0.118 Sum_probs=45.9
Q ss_pred CCCCCcEEEEEeecCCCCCCCHHHHHHHHHhc---CCcEEEEcCCCHHHHHHHHHH
Q 002208 476 SPGGPWQFVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 528 (953)
Q Consensus 476 ~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 528 (953)
....+|.=+=+++=..-+-||..++++.++.. |..|...+-|++.+|++++.-
T Consensus 162 ~~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 162 AGGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred hcCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 34677888888887778889999999999999 999999999999999998765
No 207
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.28 E-value=1.3e+02 Score=33.23 Aligned_cols=138 Identities=12% Similarity=0.167 Sum_probs=76.5
Q ss_pred cCCCCCCCHHHHHHHHHhc-CCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------c
Q 002208 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS-------------------A 539 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~a-GI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~ 539 (953)
+.+.+|.+.++.++.+++. |++. .++.||++... ...|+++|+....... .
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 89 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDP 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456777888888888766 6664 46678887644 4557778875421100 0
Q ss_pred ----cccCccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcC-Cc
Q 002208 540 ----SLLGQDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGD-GV 594 (953)
Q Consensus 540 ----~l~~~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GD-G~ 594 (953)
.+.-.+... .++...+..+......|.=+||.-=.++++...- .|..++++|- |+
T Consensus 90 ~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~i 169 (284)
T PRK14179 90 TWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNI 169 (284)
T ss_pred CCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 000000000 1112222233333334666788876666666543 4899999999 55
Q ss_pred cCHH---hhhhCCeeEEe-cC-ch--HHHhhccCEeecC
Q 002208 595 NDAP---ALKKADIGIAV-AD-AT--DAARGASDIVLTE 626 (953)
Q Consensus 595 ND~p---aLk~AdVGIam-g~-~t--~~a~~aaDivl~~ 626 (953)
-=.| +|.+++.-+.+ .+ .. ...-..||+|+.-
T Consensus 170 vG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 170 VGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 4444 46666666665 22 22 2233479998864
No 208
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=38.60 E-value=5.1e+02 Score=33.60 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=9.4
Q ss_pred CeEEEEEccCcCCCcEEEEc
Q 002208 142 GKWSEEEAAILVPGDIISIK 161 (953)
Q Consensus 142 G~~~~i~~~~Lv~GDiV~l~ 161 (953)
|....+...|.+|-|.+.++
T Consensus 138 GDiv~l~~Gd~IPaDg~ii~ 157 (884)
T TIGR01522 138 GDLVCLSVGDRVPADLRIVE 157 (884)
T ss_pred CCEEEecCCCEEeeeEEEEE
Confidence 44444444444444444443
No 209
>PRK11507 ribosome-associated protein; Provisional
Probab=37.11 E-value=38 Score=28.98 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=23.1
Q ss_pred EEEECCeEEEEEccCcCCCcEEEEcC
Q 002208 137 KLLRDGKWSEEEAAILVPGDIISIKL 162 (953)
Q Consensus 137 ~V~RdG~~~~i~~~~Lv~GDiV~l~~ 162 (953)
.|..||+...-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999999854
No 210
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=35.71 E-value=89 Score=31.49 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=43.6
Q ss_pred ccHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCCCCCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCCcEEEEcCCC
Q 002208 439 AKEDLKKKVHAIIDKYAERGLRSLAVARQEVPERTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 518 (953)
Q Consensus 439 ~~~~~~~~~~~~~~~~a~~GlR~L~vA~~~~~~~~~~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~ 518 (953)
++-....-+..+++.+++.|=-.++++... =-+++.++|+.+++.|++|+-+||.+
T Consensus 91 NDy~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~ 146 (176)
T COG0279 91 NDYGYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKD 146 (176)
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 344445567778888888886666665433 12589999999999999999999998
Q ss_pred HH
Q 002208 519 LA 520 (953)
Q Consensus 519 ~~ 520 (953)
-.
T Consensus 147 GG 148 (176)
T COG0279 147 GG 148 (176)
T ss_pred Cc
Confidence 44
No 211
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=35.00 E-value=30 Score=23.98 Aligned_cols=15 Identities=47% Similarity=0.556 Sum_probs=13.3
Q ss_pred CCCCCHHHHHHHHHh
Q 002208 34 REGLSSTEGANRLQI 48 (953)
Q Consensus 34 ~~GLt~~e~~~r~~~ 48 (953)
++|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999975
No 212
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=34.94 E-value=5.4e+02 Score=26.78 Aligned_cols=7 Identities=29% Similarity=0.496 Sum_probs=2.8
Q ss_pred cChhHHH
Q 002208 785 ERPGLLL 791 (953)
Q Consensus 785 ~~~~~~l 791 (953)
.++++|.
T Consensus 142 ~r~~~~k 148 (206)
T PF06570_consen 142 KRPSWWK 148 (206)
T ss_pred cccHHHH
Confidence 3444433
No 213
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.45 E-value=1.7e+02 Score=32.29 Aligned_cols=138 Identities=12% Similarity=0.125 Sum_probs=78.1
Q ss_pred cCCCCCCCHHHHHHHHHhc-CCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCC--C----c-------------
Q 002208 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIA------KETGRRLGMGTNMYP--S----A------------- 539 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~a-GI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~--~----~------------- 539 (953)
+...+|++.++.|+.+++. |++. .++.||++... ...|+++||...... . .
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 88 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARP 88 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888876 7764 55678887644 455777888542210 0 0
Q ss_pred cccC----ccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc
Q 002208 540 SLLG----QDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN 595 (953)
Q Consensus 540 ~l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N 595 (953)
.+.| ..... .++...+..+......|.=+||.-=.++++.++- .|..|..+|-+..
T Consensus 89 ~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~i 168 (286)
T PRK14184 89 DIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNI 168 (286)
T ss_pred cCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0000 00000 1112222233333344667888877777776653 4899999999853
Q ss_pred ----CHHhhhh------CCeeEEecCchH--HHhhccCEeecC
Q 002208 596 ----DAPALKK------ADIGIAVADATD--AARGASDIVLTE 626 (953)
Q Consensus 596 ----D~paLk~------AdVGIamg~~t~--~a~~aaDivl~~ 626 (953)
=+-+|.+ |.|-+.-....+ ..-..||+++..
T Consensus 169 VG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 169 VGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred chHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 2345544 556555543322 334588988754
No 214
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=34.42 E-value=39 Score=36.15 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCcccccccCchhHHHHHH----hcCcEeecC
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIE----KADGFAGVF 569 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~vfar~~ 569 (953)
-++..++++.+++.|++. ++|......+.......|.. .+...++ +...+..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 368888999998899997 77776544433222222221 1111111 001122223
Q ss_pred HHHHHHHHHHhccc-CCEEEEEcCC-ccCHHhhhhCCeeE
Q 002208 570 PEHKYEIVKKLQER-KHICGMTGDG-VNDAPALKKADIGI 607 (953)
Q Consensus 570 P~~K~~iV~~lq~~-g~~V~~~GDG-~ND~paLk~AdVGI 607 (953)
|+-=..+.+.+... ...++|+||. .+|..+=+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 33223445555432 3479999999 59999988887643
No 215
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=34.07 E-value=1.5e+02 Score=32.26 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=22.8
Q ss_pred CCCCCCHHHHHHHHHhcCCcEE-EEcCCC-HHHHHHHHHHh
Q 002208 491 DPPRHDSAETIRRALNLGVNVK-MITGDQ-LAIAKETGRRL 529 (953)
Q Consensus 491 D~lR~~v~~~I~~l~~aGI~v~-miTGD~-~~tA~~ia~~l 529 (953)
|-|-++..+.++.+++.|++.+ +++=.. .+..+.+++..
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 4455667777777777777744 554444 23444555544
No 216
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=34.02 E-value=3.6e+02 Score=25.58 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=25.8
Q ss_pred HHHHHHhcccCCEEEEEcCCcc--CHHhhhhCCeeEEec
Q 002208 574 YEIVKKLQERKHICGMTGDGVN--DAPALKKADIGIAVA 610 (953)
Q Consensus 574 ~~iV~~lq~~g~~V~~~GDG~N--D~paLk~AdVGIamg 610 (953)
.++++.+ .+=+.+...|-|.| |.+++++-+|-++-.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 3555666 33457889999998 889999998888874
No 217
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=31.53 E-value=2e+02 Score=31.50 Aligned_cols=31 Identities=6% Similarity=0.193 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCccCHHhh
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVNDAPAL 600 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~ND~paL 600 (953)
|++-.++++.+++.-..-.++|=|+|+..-.
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~ 217 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQI 217 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 4555677777777644455679999855443
No 218
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=30.97 E-value=1.6e+02 Score=33.05 Aligned_cols=49 Identities=20% Similarity=0.198 Sum_probs=39.0
Q ss_pred EEEeecCCCCCCCHHHHHHHHHhc----CCcEEEEcCCC---HH-HHHHHHHHhCCC
Q 002208 484 VGLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---LA-IAKETGRRLGMG 532 (953)
Q Consensus 484 lG~i~i~D~lR~~v~~~I~~l~~a----GI~v~miTGD~---~~-tA~~ia~~lGi~ 532 (953)
=|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 377777889999999999999998 99999999654 33 355566777774
No 219
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=30.85 E-value=2.6e+02 Score=28.60 Aligned_cols=50 Identities=18% Similarity=0.270 Sum_probs=29.3
Q ss_pred cccccccccCC-HHHHHHHcCCCCCCCCHHHHHHHHHhcCCCcccccccchHHHHH
Q 002208 12 KNETVDLERIP-IEEVFEQLKCTREGLSSTEGANRLQIFGPNKLEEKKESKILKFL 66 (953)
Q Consensus 12 ~~~~~~~~~~~-~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l 66 (953)
.+..+|++++. .+++.+++. ...++.+|+.+|+++--.. ++.++.|...+
T Consensus 58 ~~~~~nl~~l~~v~~l~~~~~--~~~~~~~ea~~~L~~I~~~---~~~y~~~~~~l 108 (193)
T PF06738_consen 58 PPRGVNLDKLAAVNRLSRRIV--AGQLSLEEAIERLDEIDRE---PPRYPPWLVIL 108 (193)
T ss_pred CCCCcCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHhhC---CCCCCHHHHHH
Confidence 34445555543 344555543 3689999999999873321 12466665543
No 220
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.37 E-value=2.2e+02 Score=31.68 Aligned_cols=138 Identities=13% Similarity=0.183 Sum_probs=76.6
Q ss_pred cCCCCCCCHHHHHHHHHhc-CCc---EEEEcCCCHHHH------HHHHHHhCCCCCCCCCc-------------------
Q 002208 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIA------KETGRRLGMGTNMYPSA------------------- 539 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~~------------------- 539 (953)
+.++++++.++.|+.+++. |++ +.++.||++... ...|+++||....+...
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDP 88 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888876 666 456778887644 44577788854211000
Q ss_pred cccC----ccccc------------------ccCchhHHHHHHhc--CcEeecCHHHHHHHHHHhcc--cCCEEEEEcCC
Q 002208 540 SLLG----QDKDA------------------SIAALPVEELIEKA--DGFAGVFPEHKYEIVKKLQE--RKHICGMTGDG 593 (953)
Q Consensus 540 ~l~~----~~~~~------------------~~~~~~~~~~~~~~--~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG 593 (953)
.+.| .+... .++...+..+..+. ..|.=+||.-=.++++.++- .|+.|+++|.+
T Consensus 89 ~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS 168 (295)
T PRK14174 89 DVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRS 168 (295)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 0000 00000 11112222232221 34556788877777776653 48999999998
Q ss_pred cc----CHHhhh------hCCeeEEecCch--HHHhhccCEeecC
Q 002208 594 VN----DAPALK------KADIGIAVADAT--DAARGASDIVLTE 626 (953)
Q Consensus 594 ~N----D~paLk------~AdVGIamg~~t--~~a~~aaDivl~~ 626 (953)
.. =+-+|. .|.|-+.-.... ...-..||+++..
T Consensus 169 ~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 169 NIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred CcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 54 223443 355555554332 2334589998864
No 221
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=30.10 E-value=26 Score=29.56 Aligned_cols=23 Identities=26% Similarity=0.512 Sum_probs=13.4
Q ss_pred EEECCeEEEEEccCcCCCcEEEE
Q 002208 138 LLRDGKWSEEEAAILVPGDIISI 160 (953)
Q Consensus 138 V~RdG~~~~i~~~~Lv~GDiV~l 160 (953)
|..||+...-.-..|.|||+|.+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB----SS----SSEEEEE
T ss_pred eEECCEEccccCCcCCCCCEEEE
Confidence 56799999999999999999999
No 222
>COG5547 Small integral membrane protein [Function unknown]
Probab=29.39 E-value=2.2e+02 Score=23.38 Aligned_cols=48 Identities=17% Similarity=0.366 Sum_probs=27.2
Q ss_pred HHHHHHhHHH--HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002208 65 FLGFMWNPLS--WVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENN 120 (953)
Q Consensus 65 ~l~~~~~~~~--~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~ 120 (953)
|+++|+-|+. .+.++.|++-+.++ -|-. +.++++.++...++.+.+++
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwKt-ilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWKT-ILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 5667776664 23344444444433 3433 44555666777788877765
No 223
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=29.30 E-value=94 Score=31.54 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEc-CCCHHHHHHHHHHhCCC
Q 002208 493 PRHDSAETIRRALNLGVNVKMIT-GDQLAIAKETGRRLGMG 532 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miT-GD~~~tA~~ia~~lGi~ 532 (953)
+-||+++.++.|++.|+++.+.| -|.+..|+++=+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 56899999999999999999999 58899999999999987
No 224
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=29.16 E-value=1.2e+02 Score=25.75 Aligned_cols=32 Identities=19% Similarity=0.086 Sum_probs=24.6
Q ss_pred CCeEEEEECCeEEEEEcc---CcCCCcEEEEcCCC
Q 002208 133 APKTKLLRDGKWSEEEAA---ILVPGDIISIKLGD 164 (953)
Q Consensus 133 ~~~~~V~RdG~~~~i~~~---~Lv~GDiV~l~~Gd 164 (953)
...++|-.+|..++++.. ++.|||.|++..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 457888899999998754 57899999999984
No 225
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.44 E-value=1.2e+02 Score=33.60 Aligned_cols=138 Identities=14% Similarity=0.197 Sum_probs=77.5
Q ss_pred cCCCCCCCHHHHHHHHHhcCCc---EEEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------cc
Q 002208 489 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIA------KETGRRLGMGTNMYPS-------------------AS 540 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~~ 540 (953)
+.+.++++.++-|+.+++.|++ +.++.||++... ...|+++|+....+.. ..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKT 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 4456788899999999988886 456779987654 4457788985421100 00
Q ss_pred ccC----ccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc-
Q 002208 541 LLG----QDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN- 595 (953)
Q Consensus 541 l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N- 595 (953)
+.| .+... .++...+..+......|.=+||.-=.++++...- .|..|.++|-+..
T Consensus 90 V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iV 169 (284)
T PRK14170 90 IHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIV 169 (284)
T ss_pred CCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 000 00000 1111122223223334566778766666666542 4899999999853
Q ss_pred ---CHHhhhhCCeeEEe--cCch--HHHhhccCEeecC
Q 002208 596 ---DAPALKKADIGIAV--ADAT--DAARGASDIVLTE 626 (953)
Q Consensus 596 ---D~paLk~AdVGIam--g~~t--~~a~~aaDivl~~ 626 (953)
=+-+|.+.+--+.+ .... ...-..|||++..
T Consensus 170 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 170 GKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 34455555544444 3222 2223478988765
No 226
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=28.42 E-value=1.4e+03 Score=29.65 Aligned_cols=118 Identities=12% Similarity=0.090 Sum_probs=63.8
Q ss_pred HHHHHHhHH-HHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCe
Q 002208 65 FLGFMWNPL-SWVMEAAAVMAIALANGEGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGK 143 (953)
Q Consensus 65 ~l~~~~~~~-~~il~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~ 143 (953)
++..|+.-+ +.+.++..+.+++.. -..+..--++++++..+-.++..+...++.+++.++...... +
T Consensus 93 ~~~~~~~~~~~p~~~lL~~aa~ls~-------~~~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~-----~ 160 (902)
T PRK10517 93 WWVHLWVCYRNPFNILLTILGAISY-------ATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSN-----T 160 (902)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-------HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----e
Confidence 555555444 344444444444421 222333334444445555566666777887787765442211 1
Q ss_pred EEEEEc-cCcCCCcEEEEcCCCcccccEEEEec-CCeEEeecCCCCCCeeEec
Q 002208 144 WSEEEA-AILVPGDIISIKLGDIIPADARLLEG-DPLKVDQSALTGESLPVTK 194 (953)
Q Consensus 144 ~~~i~~-~~Lv~GDiV~l~~Gd~IPaD~~ll~g-~~l~Vdes~LTGEs~pv~K 194 (953)
-..+.- .+-.-|....+...|.+|-|.++++. +.+-+|=-.+.|+..-|.=
T Consensus 161 a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDE 213 (902)
T PRK10517 161 ATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQ 213 (902)
T ss_pred EEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEe
Confidence 111110 00001568899999999999999964 4455676667777654443
No 227
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=28.42 E-value=1.6e+02 Score=30.87 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCcEEEEcCCCcccccEEEEec
Q 002208 106 LLVINSTISFIEENNAGNAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEG 175 (953)
Q Consensus 106 ~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 175 (953)
++++..+..+++.+...+..+.+++....... + .+.-++-|....+...|.+|-|.++++.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~----~~~v~r~~~~~~i~~~~L~~GDiI~l~~ 62 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----K----KVTVIRDGRWQKIPSSELVPGDIIILKA 62 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----E----EEEEEETTEEEEEEGGGT-TTSEEEEET
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----c----cEEEEeccccccchHhhccceeeeeccc
Confidence 34455555666666666766666654332211 1 1222334677777888888888887754
No 228
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=28.24 E-value=24 Score=35.70 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.6
Q ss_pred EecCCCCCCCCCce
Q 002208 330 LCSDKTGTLTLNKL 343 (953)
Q Consensus 330 i~~DKTGTLT~n~m 343 (953)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999983
No 229
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.23 E-value=1.2e+02 Score=33.46 Aligned_cols=138 Identities=13% Similarity=0.145 Sum_probs=78.1
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC--c-----------------c
Q 002208 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS--A-----------------S 540 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~--~-----------------~ 540 (953)
+.++++++.++.++.+++.|+++ .++-||++... ...|+++|+....+.. . .
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 88 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPD 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567888899999998888764 56679887654 4457788885422100 0 0
Q ss_pred ccC----ccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc-
Q 002208 541 LLG----QDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN- 595 (953)
Q Consensus 541 l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N- 595 (953)
+.| .+... .++...+..+..+...|.=+||.-=.++++.++- .|+.|.++|.+..
T Consensus 89 V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 168 (282)
T PRK14169 89 VDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIV 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 000 00000 1111222223333334566788877777776653 5899999999853
Q ss_pred ---CHHhhhhCCeeEEec--CchH--HHhhccCEeecC
Q 002208 596 ---DAPALKKADIGIAVA--DATD--AARGASDIVLTE 626 (953)
Q Consensus 596 ---D~paLk~AdVGIamg--~~t~--~a~~aaDivl~~ 626 (953)
=+.+|...+.-+.+- ...+ ..-..|||++..
T Consensus 169 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 169 GRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred hHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 345565555555442 2222 233478988764
No 230
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=28.16 E-value=5.4e+02 Score=32.25 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh-hHHHHhhcCCCCeEEEEECCeEEEEEccCcCCCc-EEEEcCCCcccccEEEEec
Q 002208 98 QDFVGIVCLLVINSTISFIEENNAG-NAAAALMAGLAPKTKLLRDGKWSEEEAAILVPGD-IISIKLGDIIPADARLLEG 175 (953)
Q Consensus 98 ~~~~~i~~~~~i~~~i~~~~e~~~~-~~~~~l~~~~~~~~~V~RdG~~~~i~~~~Lv~GD-iV~l~~Gd~IPaD~~ll~g 175 (953)
...+.+.++++++.+++.+.|..++ ++.+++.++...... -. +.-++-|. ...+...|.+|-|.++++.
T Consensus 63 ~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~----~~-----a~vir~g~~~~~V~~~eL~~GDiV~v~~ 133 (679)
T PRK01122 63 GFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKD----TF-----ARKLREPGAAEEVPATELRKGDIVLVEA 133 (679)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----Ce-----EEEEECCCEEEEEEHHHcCCCCEEEEcC
Confidence 3556677788888888877776665 666666654332111 11 12233455 6888999999999999964
Q ss_pred -CCeEEeecCCCCC
Q 002208 176 -DPLKVDQSALTGE 188 (953)
Q Consensus 176 -~~l~Vdes~LTGE 188 (953)
+.+-+|=-.+.|+
T Consensus 134 Gd~IPaDG~vieG~ 147 (679)
T PRK01122 134 GEIIPADGEVIEGV 147 (679)
T ss_pred CCEEEEEEEEEEcc
Confidence 3344555555564
No 231
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.05 E-value=1.1e+02 Score=33.79 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=33.2
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcE---EEEcCCCHHHH------HHHHHHhCCCC
Q 002208 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGT 533 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~ 533 (953)
+.+.++++.++.++.+++.|+++ .++-||+++.. ...|+++|+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667888999999998888874 45579887654 44577888854
No 232
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=27.45 E-value=33 Score=30.37 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=16.7
Q ss_pred EEccCcCCCcEEEE-cCCCccccc
Q 002208 147 EEAAILVPGDIISI-KLGDIIPAD 169 (953)
Q Consensus 147 i~~~~Lv~GDiV~l-~~Gd~IPaD 169 (953)
+.-.+|.+||.|.+ ++||+||-=
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I 68 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKI 68 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceE
Confidence 34568999999988 599999963
No 233
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=27.45 E-value=84 Score=34.88 Aligned_cols=37 Identities=27% Similarity=0.330 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEcCCCHHHH-HHHHHHhCC
Q 002208 495 HDSAETIRRALNLGVNVKMITGDQLAIA-KETGRRLGM 531 (953)
Q Consensus 495 ~~v~~~I~~l~~aGI~v~miTGD~~~tA-~~ia~~lGi 531 (953)
+++...=+.|+..|.+++++|.+....+ ++..+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 3566677888899999999997765433 444455555
No 234
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=25.94 E-value=7.4e+02 Score=27.31 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHhHHh
Q 002208 829 LYSIVFYVPLDVMKFAIRYI 848 (953)
Q Consensus 829 ~~~~~~~~~~~~~K~~~r~~ 848 (953)
...+.+++..-.++++.++.
T Consensus 132 ~~~~~~~~~~~~~~~i~~~~ 151 (293)
T PF03419_consen 132 GFIIAYLLLKRLWKYIKRRR 151 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444445666665543
No 235
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=25.30 E-value=1.1e+02 Score=30.51 Aligned_cols=43 Identities=16% Similarity=0.103 Sum_probs=38.0
Q ss_pred CCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 002208 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (953)
Q Consensus 490 ~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (953)
.=.+||++.+.+++|++. +++.+.|.=....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345899999999999955 9999999999999999999998753
No 236
>PLN03190 aminophospholipid translocase; Provisional
Probab=25.29 E-value=4.7e+02 Score=35.10 Aligned_cols=67 Identities=9% Similarity=0.091 Sum_probs=36.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcCCC---CeEEE----EECCeEEEEEccCcCCCcEEEEc
Q 002208 95 PDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLA---PKTKL----LRDGKWSEEEAAILVPGDIISIK 161 (953)
Q Consensus 95 ~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~---~~~~V----~RdG~~~~i~~~~Lv~GDiV~l~ 161 (953)
..+...++++++..+...++.+..+++++....-....- ....+ ++-|....+...|.+|-|.+.+.
T Consensus 138 t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~ 211 (1178)
T PLN03190 138 ASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLS 211 (1178)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEe
Confidence 355566666666666666666666666655544332211 11111 23455666666666666666665
No 237
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.70 E-value=1.6e+02 Score=32.40 Aligned_cols=138 Identities=16% Similarity=0.182 Sum_probs=76.0
Q ss_pred cCCCCCCCHHHHHHHHHhcCCc---EEEEcCCCHHHH------HHHHHHhCCCCCCCCC------c-------------c
Q 002208 489 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIA------KETGRRLGMGTNMYPS------A-------------S 540 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~------~-------------~ 540 (953)
+.++++++.++.++.+++.|++ ..++-||++... ...|+++|+....+.. . .
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~ 88 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPA 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456788889999999888887 456679887654 4557788885432110 0 0
Q ss_pred ccC----ccccc------------------ccCchhHHHHHHhcCc-EeecCHHHHHHHHHHhc--ccCCEEEEEcCCcc
Q 002208 541 LLG----QDKDA------------------SIAALPVEELIEKADG-FAGVFPEHKYEIVKKLQ--ERKHICGMTGDGVN 595 (953)
Q Consensus 541 l~~----~~~~~------------------~~~~~~~~~~~~~~~v-far~~P~~K~~iV~~lq--~~g~~V~~~GDG~N 595 (953)
+.| .+... .++...+..+..+... |.=+||.-=.++++..+ -.|..|..+|.+..
T Consensus 89 V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~i 168 (282)
T PRK14182 89 VHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNI 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 000 00000 1111222233322222 55677876667776665 34899999999853
Q ss_pred ----CHHhhhhCCeeEEe--cCchH--HHhhccCEeecC
Q 002208 596 ----DAPALKKADIGIAV--ADATD--AARGASDIVLTE 626 (953)
Q Consensus 596 ----D~paLk~AdVGIam--g~~t~--~a~~aaDivl~~ 626 (953)
=+-+|.+.+--+.+ ....+ ..-..|||++..
T Consensus 169 VGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 169 VGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAA 207 (282)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 34555544444444 22111 222368888764
No 238
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.57 E-value=1.5e+02 Score=32.81 Aligned_cols=138 Identities=17% Similarity=0.184 Sum_probs=73.6
Q ss_pred cCCCCCCCHHHHHHHHHhc-CCc---EEEEcCCCHHHH------HHHHHHhCCCCCCCCC--c-----------------
Q 002208 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIA------KETGRRLGMGTNMYPS--A----------------- 539 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~lGi~~~~~~~--~----------------- 539 (953)
+.++++++.++-|+.+++. |++ ..++-||++... ...|+++||....+.. .
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQ 88 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888755 776 345578887644 4457778885421100 0
Q ss_pred cccC----cccc------------------cccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc
Q 002208 540 SLLG----QDKD------------------ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN 595 (953)
Q Consensus 540 ~l~~----~~~~------------------~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N 595 (953)
.+.| .+.. +.++...+..+..+...|.=+||.-=.++++.++- .|..|+++|.|..
T Consensus 89 ~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~ 168 (285)
T PRK14191 89 NIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNI 168 (285)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCch
Confidence 0000 0000 01112222333333334556888877777777654 4999999999932
Q ss_pred ----CHHhhhhC--CeeEEecCchH--HHhhccCEeecC
Q 002208 596 ----DAPALKKA--DIGIAVADATD--AARGASDIVLTE 626 (953)
Q Consensus 596 ----D~paLk~A--dVGIamg~~t~--~a~~aaDivl~~ 626 (953)
=+-+|... .|-+.-....+ ..-..||+++..
T Consensus 169 VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 169 VGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred hHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 23344333 33333232222 223467777654
No 239
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.46 E-value=3.2e+02 Score=30.12 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=42.3
Q ss_pred HHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCC-ccCHH---hhhhCCeeE--EecCchH--HHhhccCEeecC
Q 002208 558 LIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDG-VNDAP---ALKKADIGI--AVADATD--AARGASDIVLTE 626 (953)
Q Consensus 558 ~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG-~ND~p---aLk~AdVGI--amg~~t~--~a~~aaDivl~~ 626 (953)
+......|.=+||.-=.++++.+.- .|..|..+|-+ .-=-| +|...+--+ .-....+ ..-..||+++..
T Consensus 124 l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 124 LVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 3333345667788877777777653 48999999999 44455 665544444 4333222 233478988754
No 240
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.15 E-value=1.3e+02 Score=33.57 Aligned_cols=138 Identities=15% Similarity=0.145 Sum_probs=76.8
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCc-------------------c
Q 002208 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYPSA-------------------S 540 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~~-------------------~ 540 (953)
+.+.+|++.++.++.+++.|+++ .++-||++... ...|+++|+....+... .
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADED 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 44567888899999998888864 55679887644 44577888854221100 0
Q ss_pred ccC----ccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc-
Q 002208 541 LLG----QDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN- 595 (953)
Q Consensus 541 l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N- 595 (953)
+.| ..... .++...+..+......|.=+||.-=.++++.++- .|..|.++|-+..
T Consensus 90 V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 169 (297)
T PRK14167 90 VHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIV 169 (297)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 000 00000 1111122223222234555788877777777653 5999999999854
Q ss_pred ---CHHhhhh------CCeeEEecCch--HHHhhccCEeecC
Q 002208 596 ---DAPALKK------ADIGIAVADAT--DAARGASDIVLTE 626 (953)
Q Consensus 596 ---D~paLk~------AdVGIamg~~t--~~a~~aaDivl~~ 626 (953)
=+-+|.+ |-|-+.-.... ...-..|||++..
T Consensus 170 GkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsA 211 (297)
T PRK14167 170 GKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAA 211 (297)
T ss_pred HHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 2345543 33444333222 2233478988863
No 241
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=24.12 E-value=1.9e+02 Score=29.29 Aligned_cols=67 Identities=21% Similarity=0.126 Sum_probs=45.0
Q ss_pred cEeecCHHHHHHHHHHhcccCCEEEEEcCCccCHHhhhhCCeeEEecCchHHHh-hccCEeecCCCchhHHHHHHHhHHH
Q 002208 564 GFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-GASDIVLTEPGLSVIISAVLTSRAI 642 (953)
Q Consensus 564 vfar~~P~~K~~iV~~lq~~g~~V~~~GDG~ND~paLk~AdVGIamg~~t~~a~-~aaDivl~~~~~~~i~~ai~~gR~~ 642 (953)
.+.=-+|++=...++.+++.| .-+.+|++. ..+.|+ .--..++...+..+|..|+.+++++
T Consensus 105 ~~~~~~~~e~~~~i~~~~~~G-~~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i 166 (176)
T PF06506_consen 105 IYPYDSEEEIEAAIKQAKAEG-VDVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRI 166 (176)
T ss_dssp EEEESSHHHHHHHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcC-CcEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHH
Confidence 355566888888899998888 445677663 122222 2345678888899999999999999
Q ss_pred HHHHHH
Q 002208 643 FQRMKN 648 (953)
Q Consensus 643 ~~~i~~ 648 (953)
++..++
T Consensus 167 ~~~~~~ 172 (176)
T PF06506_consen 167 ARARRR 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887664
No 242
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=23.46 E-value=1.1e+02 Score=26.10 Aligned_cols=52 Identities=25% Similarity=0.318 Sum_probs=34.9
Q ss_pred HHHHHHhcccCCEEEEEcCC-ccCHHhhhhCCeeEEe-cCch---HHH---hhccCEeec
Q 002208 574 YEIVKKLQERKHICGMTGDG-VNDAPALKKADIGIAV-ADAT---DAA---RGASDIVLT 625 (953)
Q Consensus 574 ~~iV~~lq~~g~~V~~~GDG-~ND~paLk~AdVGIam-g~~t---~~a---~~aaDivl~ 625 (953)
....+.+......+.|+||. ..|+.+=+++++--.. ..|. +.. ...+|+|+.
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 34555555455679999999 9999999999985443 3221 222 357888873
No 243
>PF15584 Imm44: Immunity protein 44
Probab=23.12 E-value=38 Score=30.37 Aligned_cols=20 Identities=35% Similarity=0.368 Sum_probs=16.5
Q ss_pred CCcEEEEcCCCcccccEEEE
Q 002208 154 PGDIISIKLGDIIPADARLL 173 (953)
Q Consensus 154 ~GDiV~l~~Gd~IPaD~~ll 173 (953)
+.+-..|+.|+.|||||+--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45667899999999999863
No 244
>PRK04017 hypothetical protein; Provisional
Probab=23.06 E-value=1.9e+02 Score=28.18 Aligned_cols=69 Identities=22% Similarity=0.377 Sum_probs=40.2
Q ss_pred HHHHHHhcccCCE-EEEEcCCccCHHhhhhCCe-e-------EEecCch-HHHhhccC-EeecCCCchhHHHHHHHhHHH
Q 002208 574 YEIVKKLQERKHI-CGMTGDGVNDAPALKKADI-G-------IAVADAT-DAARGASD-IVLTEPGLSVIISAVLTSRAI 642 (953)
Q Consensus 574 ~~iV~~lq~~g~~-V~~~GDG~ND~paLk~AdV-G-------Iamg~~t-~~a~~aaD-ivl~~~~~~~i~~ai~~gR~~ 642 (953)
.++++.|++..+. +..+=-|-+|..+|+++++ | .++.+-+ ..|....+ |+|+|++. .|+++
T Consensus 10 ~e~i~~L~e~s~~g~vIVVEGk~D~~~L~~lGv~~~iI~t~g~~~~~~~e~ia~~~r~VIILTD~D~--------~GekI 81 (132)
T PRK04017 10 EEIIEELKEFSEAGAPIIVEGKRDVESLRKLGVEGEIIKVSRTPLAEIAELIASRGKEVIILTDFDR--------KGEEL 81 (132)
T ss_pred HHHHHHHHHhcCCCCEEEEeCccHHHHHHHcCCCccEEEECCeecchHHHHHHhcCCeEEEEECCCc--------chHHH
Confidence 3567777765443 3344488999999999977 3 2222111 22223344 56778887 56666
Q ss_pred HHHHHHHH
Q 002208 643 FQRMKNYT 650 (953)
Q Consensus 643 ~~~i~~~i 650 (953)
.+.+++.+
T Consensus 82 r~~l~~~l 89 (132)
T PRK04017 82 AKKLSEYL 89 (132)
T ss_pred HHHHHHHH
Confidence 55555543
No 245
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.60 E-value=1.7e+02 Score=32.33 Aligned_cols=138 Identities=14% Similarity=0.222 Sum_probs=76.4
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCc-------------------c
Q 002208 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYPSA-------------------S 540 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~~-------------------~ 540 (953)
+.+.+|++.++-++++++.|+++ .++-||++... ...|+++|+....+... .
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 90 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPR 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 45667888888899998888764 44568887543 55577888854221000 0
Q ss_pred ccC----cccc------------------cccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc-
Q 002208 541 LLG----QDKD------------------ASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN- 595 (953)
Q Consensus 541 l~~----~~~~------------------~~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N- 595 (953)
+.| .+.. +.++...+..+..+...|.=+||.-=.++++.++- .|..|..+|-+.-
T Consensus 91 V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 170 (284)
T PRK14190 91 INGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIV 170 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 000 0000 01122223333333345667888877777777653 4899999998853
Q ss_pred ---CHHhhhhCCeeEEe--cCch--HHHhhccCEeecC
Q 002208 596 ---DAPALKKADIGIAV--ADAT--DAARGASDIVLTE 626 (953)
Q Consensus 596 ---D~paLk~AdVGIam--g~~t--~~a~~aaDivl~~ 626 (953)
=+.+|...+--+-+ .... ...-..||+++..
T Consensus 171 G~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 171 GKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVA 208 (284)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 23445444433333 3222 2233478887754
No 246
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.67 E-value=1.6e+02 Score=32.55 Aligned_cols=139 Identities=16% Similarity=0.117 Sum_probs=75.6
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC-------------------c-
Q 002208 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS-------------------A- 539 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~-------------------~- 539 (953)
+.+.+|++.++-|+++++.|+++ .+.-||++... ...|+++|+....+.. .
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPK 90 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 34567778888888888777764 45568876543 4456777875421100 0
Q ss_pred ---cccCccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhc--ccCCEEEEEcCCcc-
Q 002208 540 ---SLLGQDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQ--ERKHICGMTGDGVN- 595 (953)
Q Consensus 540 ---~l~~~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq--~~g~~V~~~GDG~N- 595 (953)
.+.-.+... .++...+..+......|.=+||.-=.++++.++ -.|..|..+|-|..
T Consensus 91 V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iV 170 (285)
T PRK14189 91 IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIV 170 (285)
T ss_pred CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 000000000 111222223333334456678886666666664 34899999999865
Q ss_pred ---CHHhhhhCCeeEEe--cCchH--HHhhccCEeecCC
Q 002208 596 ---DAPALKKADIGIAV--ADATD--AARGASDIVLTEP 627 (953)
Q Consensus 596 ---D~paLk~AdVGIam--g~~t~--~a~~aaDivl~~~ 627 (953)
=+.+|...+.-+.+ ....+ ..-..||+++..-
T Consensus 171 GkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~av 209 (285)
T PRK14189 171 GKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAV 209 (285)
T ss_pred HHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcC
Confidence 34455555555544 22222 2334788887653
No 247
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=21.63 E-value=1.8e+02 Score=32.41 Aligned_cols=38 Identities=34% Similarity=0.504 Sum_probs=29.8
Q ss_pred eecCCCCCCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 002208 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (953)
Q Consensus 487 i~i~D~lR~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia 526 (953)
+.+-|.||++ +.|+++|++|.+|+++|--...-|...+
T Consensus 161 V~vLdRpRH~--~lI~eiR~~Gari~Li~DGDVa~ai~~~ 198 (319)
T PRK09479 161 VVVLDRPRHE--ELIAEIREAGARVKLISDGDVAGAIATA 198 (319)
T ss_pred EEEEcCchHH--HHHHHHHHcCCeEEEeccccHHHHHHHh
Confidence 4566888875 8899999999999999965555565555
No 248
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=21.53 E-value=96 Score=33.10 Aligned_cols=47 Identities=26% Similarity=0.241 Sum_probs=33.0
Q ss_pred EEeecCCCCCCCHHHHHHHHHhcCCcEEEEc---CCCHHHHH-HHHHHhCC
Q 002208 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAK-ETGRRLGM 531 (953)
Q Consensus 485 G~i~i~D~lR~~v~~~I~~l~~aGI~v~miT---GD~~~tA~-~ia~~lGi 531 (953)
|++.-.+.+=+++.++|+.+++.|++++++| |....... .+.+..|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4444556667899999999999999999999 44444333 33333565
No 249
>PLN02591 tryptophan synthase
Probab=21.47 E-value=2.9e+02 Score=29.91 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhcccCCEEEEEcCCcc---CHHhhhh
Q 002208 570 PEHKYEIVKKLQERKHICGMTGDGVN---DAPALKK 602 (953)
Q Consensus 570 P~~K~~iV~~lq~~g~~V~~~GDG~N---D~paLk~ 602 (953)
|++-.+.++.+++....-.++|=|++ |+..+.+
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 55556777888776566667899988 4444433
No 250
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=21.07 E-value=1.3e+02 Score=28.24 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHhCC
Q 002208 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (953)
Q Consensus 494 R~~v~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 531 (953)
-+++.++++.+++.|++++.+|++.+ -...+.+-|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 36889999999999999999999874 2334554453
No 251
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=20.95 E-value=85 Score=33.36 Aligned_cols=56 Identities=25% Similarity=0.362 Sum_probs=27.7
Q ss_pred HHHHHHHHhccc-C------CEEEEEcCCccCHHhhhhC------CeeEEecCch-HHHhhccCEeecCC
Q 002208 572 HKYEIVKKLQER-K------HICGMTGDGVNDAPALKKA------DIGIAVADAT-DAARGASDIVLTEP 627 (953)
Q Consensus 572 ~K~~iV~~lq~~-g------~~V~~~GDG~ND~paLk~A------dVGIamg~~t-~~a~~aaDivl~~~ 627 (953)
.|...|+.+-+. + ..++++||...|-.|++.. +++|-++..+ -.-..+|++-|.++
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 488888866554 3 3699999999999999863 5677777543 23344677766554
No 252
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.68 E-value=2.1e+02 Score=31.58 Aligned_cols=138 Identities=17% Similarity=0.164 Sum_probs=78.6
Q ss_pred cCCCCCCCHHHHHHHHHhcCCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCc-------------------c
Q 002208 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGTNMYPSA-------------------S 540 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~~-------------------~ 540 (953)
+.+.++++.++.++.+++.|++. .++-||+++.. ...|+++|+....+... .
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 88 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDS 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567788889999998888874 56678887644 45577888863211000 0
Q ss_pred ccC----cccc------------------cccCchhHHHHHHh-cCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc
Q 002208 541 LLG----QDKD------------------ASIAALPVEELIEK-ADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN 595 (953)
Q Consensus 541 l~~----~~~~------------------~~~~~~~~~~~~~~-~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N 595 (953)
+.| .+.. +.++...+..+... ...|.=+||.-=.++++..+- .|+.|+++|-+..
T Consensus 89 V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~i 168 (282)
T PRK14166 89 VHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNI 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 000 0000 01112222333322 234666788877777776653 4899999999854
Q ss_pred ----CHHhhhhCCeeEEec-Cch---HHHhhccCEeecC
Q 002208 596 ----DAPALKKADIGIAVA-DAT---DAARGASDIVLTE 626 (953)
Q Consensus 596 ----D~paLk~AdVGIamg-~~t---~~a~~aaDivl~~ 626 (953)
=+.+|.+.|--+.+- +-| ...-..|||++..
T Consensus 169 VGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 169 VGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 345666555555552 222 2233478888764
No 253
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=20.55 E-value=4e+02 Score=28.58 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEc------CCCHHHHHHHHHHhCCC
Q 002208 493 PRHDSAETIRRALNLGVNVKMIT------GDQLAIAKETGRRLGMG 532 (953)
Q Consensus 493 lR~~v~~~I~~l~~aGI~v~miT------GD~~~tA~~ia~~lGi~ 532 (953)
...+..+.++.++++|++-+.+= -|+.....+.+++.|+.
T Consensus 86 ~~~~~~~~i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~ 131 (244)
T PRK13125 86 YVDSLDNFLNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLK 131 (244)
T ss_pred hhhCHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCC
Confidence 45566666777777777655542 13334455556666663
No 254
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=20.35 E-value=93 Score=29.10 Aligned_cols=80 Identities=14% Similarity=0.222 Sum_probs=53.7
Q ss_pred HHHHHcCCeEEEEEEeccCCCCC--CCCCCCcEEEEEeecCCCCCCCHHHHHHHHHhcCC-cE-EEEcCCCHHHHHHHHH
Q 002208 452 DKYAERGLRSLAVARQEVPERTK--ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIAKETGR 527 (953)
Q Consensus 452 ~~~a~~GlR~L~vA~~~~~~~~~--~~~e~~l~llG~i~i~D~lR~~v~~~I~~l~~aGI-~v-~miTGD~~~tA~~ia~ 527 (953)
.-+...|++|+.+... +|.++. .-.+.+..++|+-...++.-+.+++.++.+|+.+- ++ +++-|-....-.+.++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3456789999777633 332211 11244557888888877777999999999999976 44 5676765544345777
Q ss_pred HhCCC
Q 002208 528 RLGMG 532 (953)
Q Consensus 528 ~lGi~ 532 (953)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88864
No 255
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.33 E-value=1.5e+02 Score=33.08 Aligned_cols=138 Identities=16% Similarity=0.180 Sum_probs=75.5
Q ss_pred cCCCCCCCHHHHHHHHHhc-CCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCC--c-----------------
Q 002208 489 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIA------KETGRRLGMGTNMYPS--A----------------- 539 (953)
Q Consensus 489 i~D~lR~~v~~~I~~l~~a-GI~v---~miTGD~~~tA------~~ia~~lGi~~~~~~~--~----------------- 539 (953)
+.+.+|++.++.++.+++. |++. .++-||++... ...|+++||....+.. .
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 89 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDE 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4466788888888888766 7764 56678887654 4457778885421100 0
Q ss_pred cccC----ccccc------------------ccCchhHHHHHHhcCcEeecCHHHHHHHHHHhcc--cCCEEEEEcCCcc
Q 002208 540 SLLG----QDKDA------------------SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQE--RKHICGMTGDGVN 595 (953)
Q Consensus 540 ~l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~~P~~K~~iV~~lq~--~g~~V~~~GDG~N 595 (953)
.+.| .+... .++...+..+......|.=+||.-=.++++.++- .|..|+++|-+..
T Consensus 90 ~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~i 169 (297)
T PRK14186 90 RVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSIL 169 (297)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0000 00000 1111222223322233556788877777776653 4899999999853
Q ss_pred ----CHHhhhhCCeeEEe--cCch--HHHhhccCEeecC
Q 002208 596 ----DAPALKKADIGIAV--ADAT--DAARGASDIVLTE 626 (953)
Q Consensus 596 ----D~paLk~AdVGIam--g~~t--~~a~~aaDivl~~ 626 (953)
=+-+|.+.+.-+.+ .... ...-..|||++..
T Consensus 170 VGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsA 208 (297)
T PRK14186 170 VGKPLALMLLAANATVTIAHSRTQDLASITREADILVAA 208 (297)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 34455444444444 3222 2223478888764
No 256
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=20.31 E-value=1.8e+02 Score=32.86 Aligned_cols=57 Identities=28% Similarity=0.410 Sum_probs=39.2
Q ss_pred HHHHHhcccCCEEEEEcCCc--------------------cCHHhhhhC--CeeEEecC----chHHHhh--ccCEeecC
Q 002208 575 EIVKKLQERKHICGMTGDGV--------------------NDAPALKKA--DIGIAVAD----ATDAARG--ASDIVLTE 626 (953)
Q Consensus 575 ~iV~~lq~~g~~V~~~GDG~--------------------ND~paLk~A--dVGIamg~----~t~~a~~--aaDivl~~ 626 (953)
.+++.|+++|..|+.+.=|. .|-|+|=+- ++.+.++. +...+.+ .+|++++|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 56788888888888884332 477777444 67777762 3344433 58999999
Q ss_pred CCchh
Q 002208 627 PGLSV 631 (953)
Q Consensus 627 ~~~~~ 631 (953)
|+|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 99864
Done!