Query 002209
Match_columns 953
No_of_seqs 628 out of 4602
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 17:03:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002209.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002209hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 8.9E-56 3E-60 541.9 57.9 630 109-902 17-729 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 7.2E-54 2.5E-58 527.1 60.7 628 99-899 22-740 (741)
3 1xfd_A DIP, dipeptidyl aminope 100.0 4.4E-53 1.5E-57 518.8 45.1 630 110-899 18-722 (723)
4 2z3z_A Dipeptidyl aminopeptida 100.0 4.9E-51 1.7E-55 498.9 59.9 569 190-898 83-706 (706)
5 1z68_A Fibroblast activation p 100.0 2.4E-51 8.2E-56 502.7 55.3 603 164-899 37-719 (719)
6 3azo_A Aminopeptidase; POP fam 100.0 2.7E-48 9.3E-53 471.0 58.0 575 189-901 24-651 (662)
7 3o4h_A Acylamino-acid-releasin 100.0 1.1E-48 3.9E-53 466.4 47.9 538 190-900 23-581 (582)
8 2xdw_A Prolyl endopeptidase; a 100.0 5E-47 1.7E-51 462.4 59.0 584 191-900 76-706 (710)
9 2bkl_A Prolyl endopeptidase; m 100.0 1.1E-46 3.6E-51 458.1 60.7 580 194-901 73-678 (695)
10 3iuj_A Prolyl endopeptidase; h 100.0 6E-46 2.1E-50 450.0 60.1 578 195-901 83-687 (693)
11 1yr2_A Prolyl oligopeptidase; 100.0 1.2E-45 4.3E-50 451.7 57.0 581 194-902 112-721 (741)
12 2xe4_A Oligopeptidase B; hydro 100.0 3.4E-43 1.1E-47 428.0 57.2 574 190-900 118-743 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 7.1E-35 2.4E-39 345.2 54.3 321 551-900 371-708 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 1.6E-23 5.3E-28 235.6 28.6 329 111-563 38-386 (388)
15 3pe7_A Oligogalacturonate lyas 99.9 4.3E-23 1.5E-27 231.9 30.8 344 177-620 21-386 (388)
16 4a5s_A Dipeptidyl peptidase 4 99.9 1.7E-22 5.7E-27 247.0 30.5 336 190-625 18-408 (740)
17 1k32_A Tricorn protease; prote 99.9 2.6E-22 8.9E-27 254.9 32.3 387 108-627 14-470 (1045)
18 1xfd_A DIP, dipeptidyl aminope 99.9 3.3E-22 1.1E-26 244.6 31.2 339 110-531 62-431 (723)
19 3f67_A Putative dienelactone h 99.9 8.8E-22 3E-26 205.1 23.9 222 636-897 3-241 (241)
20 3c5m_A Oligogalacturonate lyas 99.9 3.3E-21 1.1E-25 216.9 29.5 325 111-567 38-390 (396)
21 2ecf_A Dipeptidyl peptidase IV 99.9 5.8E-21 2E-25 234.2 33.4 332 189-626 37-423 (741)
22 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.3E-21 4.5E-26 219.5 25.1 231 637-901 125-367 (386)
23 3hxk_A Sugar hydrolase; alpha- 99.9 6.4E-22 2.2E-26 211.0 21.4 237 642-902 17-270 (276)
24 4ao6_A Esterase; hydrolase, th 99.9 8.4E-22 2.9E-26 207.5 22.0 230 617-899 9-259 (259)
25 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.7E-21 1.6E-25 217.0 28.5 256 199-573 142-399 (415)
26 1k32_A Tricorn protease; prote 99.9 7E-21 2.4E-25 241.8 33.0 273 190-604 205-492 (1045)
27 1z68_A Fibroblast activation p 99.9 2.3E-21 7.8E-26 236.8 26.7 349 110-571 61-453 (719)
28 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-20 4.6E-25 213.2 29.1 249 163-521 159-409 (415)
29 2z3z_A Dipeptidyl aminopeptida 99.9 2.7E-20 9.4E-25 226.8 33.7 333 109-567 82-441 (706)
30 3c5m_A Oligogalacturonate lyas 99.9 6.1E-21 2.1E-25 214.8 25.8 326 191-625 38-391 (396)
31 3ebl_A Gibberellin receptor GI 99.9 8.6E-21 2.9E-25 210.1 25.8 245 634-902 59-355 (365)
32 3bxp_A Putative lipase/esteras 99.9 5.1E-21 1.7E-25 204.2 22.1 237 637-898 2-271 (277)
33 2i3d_A AGR_C_3351P, hypothetic 99.9 5E-20 1.7E-24 193.1 27.2 213 638-900 20-235 (249)
34 3doh_A Esterase; alpha-beta hy 99.9 1E-20 3.6E-25 211.4 22.9 226 638-897 143-378 (380)
35 1vlq_A Acetyl xylan esterase; 99.9 6.8E-21 2.3E-25 209.6 19.9 236 634-899 63-335 (337)
36 3ksr_A Putative serine hydrola 99.9 1.3E-20 4.5E-25 202.4 20.2 232 638-902 5-245 (290)
37 3k2i_A Acyl-coenzyme A thioest 99.9 1.6E-20 5.4E-25 213.1 21.5 221 651-901 144-414 (422)
38 3o4h_A Acylamino-acid-releasin 99.9 1.2E-20 4.1E-25 224.3 21.3 295 101-567 15-320 (582)
39 1zi8_A Carboxymethylenebutenol 99.9 1.2E-20 4.2E-25 195.7 18.5 207 640-900 4-234 (236)
40 3fcy_A Xylan esterase 1; alpha 99.8 1.4E-20 4.7E-25 208.0 19.9 230 635-896 78-343 (346)
41 3hlk_A Acyl-coenzyme A thioest 99.8 1.4E-20 4.8E-25 214.4 19.8 221 651-901 160-430 (446)
42 1l7a_A Cephalosporin C deacety 99.8 3.8E-20 1.3E-24 201.4 21.8 231 635-899 52-317 (318)
43 2o2g_A Dienelactone hydrolase; 99.8 1.1E-19 3.6E-24 186.7 23.0 209 636-899 9-223 (223)
44 3ga7_A Acetyl esterase; phosph 99.8 1.2E-19 4.1E-24 198.4 24.7 233 637-900 61-324 (326)
45 2wtm_A EST1E; hydrolase; 1.60A 99.8 1.1E-19 3.7E-24 190.8 22.3 227 642-899 4-250 (251)
46 3trd_A Alpha/beta hydrolase; c 99.8 8.4E-20 2.9E-24 185.5 20.7 203 638-894 5-207 (208)
47 3i6y_A Esterase APC40077; lipa 99.8 8.6E-21 3E-25 202.7 14.0 238 639-899 17-279 (280)
48 3bjr_A Putative carboxylestera 99.8 1E-20 3.5E-25 202.5 14.3 239 635-897 15-282 (283)
49 3fak_A Esterase/lipase, ESTE5; 99.8 3.9E-20 1.3E-24 201.6 18.9 221 651-902 66-312 (322)
50 3fcx_A FGH, esterase D, S-form 99.8 1.1E-20 3.9E-25 202.0 13.8 240 640-899 17-281 (282)
51 3ls2_A S-formylglutathione hyd 99.8 1.6E-20 5.4E-25 200.7 14.9 238 639-899 15-279 (280)
52 2ojh_A Uncharacterized protein 99.8 1.1E-18 3.7E-23 187.1 28.8 260 163-530 22-292 (297)
53 2gop_A Trilobed protease; beta 99.8 3.5E-19 1.2E-23 196.7 24.7 332 100-631 6-343 (347)
54 2fuk_A XC6422 protein; A/B hyd 99.8 2.8E-19 9.4E-24 183.3 21.4 210 638-900 9-218 (220)
55 3e4d_A Esterase D; S-formylglu 99.8 3.5E-20 1.2E-24 197.7 15.0 235 639-899 15-278 (278)
56 2ymu_A WD-40 repeat protein; u 99.8 4E-18 1.4E-22 202.2 34.2 334 110-600 223-566 (577)
57 1mpx_A Alpha-amino acid ester 99.8 1.2E-19 4E-24 214.5 20.5 248 637-901 23-357 (615)
58 2hdw_A Hypothetical protein PA 99.8 1.5E-19 5.3E-24 201.2 19.7 236 635-898 64-367 (367)
59 3azo_A Aminopeptidase; POP fam 99.8 2.8E-18 9.4E-23 207.4 31.8 318 108-571 23-379 (662)
60 4fbl_A LIPS lipolytic enzyme; 99.8 3.3E-19 1.1E-23 190.4 20.6 202 670-897 51-281 (281)
61 2b9v_A Alpha-amino acid ester 99.8 2.7E-19 9.4E-24 211.9 21.7 251 637-901 35-369 (652)
62 3qh4_A Esterase LIPW; structur 99.8 2.9E-19 9.8E-24 194.3 18.1 234 635-899 56-316 (317)
63 2ymu_A WD-40 repeat protein; u 99.8 2.1E-17 7.3E-22 196.0 35.7 348 110-618 182-539 (577)
64 2xdw_A Prolyl endopeptidase; a 99.8 8.3E-18 2.8E-22 204.5 32.7 332 101-569 66-424 (710)
65 3ain_A 303AA long hypothetical 99.8 2E-18 6.7E-23 188.0 24.0 234 635-899 61-321 (323)
66 2hm7_A Carboxylesterase; alpha 99.8 7.8E-19 2.7E-23 190.5 20.9 233 636-898 45-309 (310)
67 4b6g_A Putative esterase; hydr 99.8 8.2E-20 2.8E-24 195.5 12.0 237 639-899 22-283 (283)
68 3h04_A Uncharacterized protein 99.8 4.8E-18 1.6E-22 180.0 25.5 226 638-899 2-274 (275)
69 2o7r_A CXE carboxylesterase; a 99.8 5.4E-19 1.9E-23 194.4 18.5 277 596-899 8-332 (338)
70 3pfb_A Cinnamoyl esterase; alp 99.8 2.6E-18 8.8E-23 182.1 22.7 227 639-897 22-267 (270)
71 2zsh_A Probable gibberellin re 99.8 3.4E-18 1.2E-22 188.9 24.4 238 635-896 68-350 (351)
72 2bkl_A Prolyl endopeptidase; m 99.8 2.2E-17 7.6E-22 200.1 33.6 330 100-571 61-407 (695)
73 2wir_A Pesta, alpha/beta hydro 99.8 7.7E-19 2.6E-23 190.9 18.1 233 637-899 49-312 (313)
74 3hju_A Monoglyceride lipase; a 99.8 3.7E-18 1.3E-22 188.0 23.8 234 638-901 33-315 (342)
75 1lzl_A Heroin esterase; alpha/ 99.8 2.1E-18 7.2E-23 188.3 21.3 237 635-900 47-318 (323)
76 1jfr_A Lipase; serine hydrolas 99.8 3.4E-18 1.2E-22 180.5 21.7 205 637-901 23-234 (262)
77 3k6k_A Esterase/lipase; alpha/ 99.8 2.1E-18 7.1E-23 188.0 20.5 229 637-901 58-311 (322)
78 1gxr_A ESG1, transducin-like e 99.8 6.2E-17 2.1E-21 177.2 32.2 301 110-528 11-325 (337)
79 1jjf_A Xylanase Z, endo-1,4-be 99.8 1.5E-17 5E-22 176.3 25.8 220 637-898 30-261 (268)
80 4e15_A Kynurenine formamidase; 99.8 1.8E-19 6E-24 195.0 10.7 209 639-876 58-280 (303)
81 2ojh_A Uncharacterized protein 99.8 3.5E-17 1.2E-21 175.3 28.2 270 216-605 19-293 (297)
82 2uz0_A Esterase, tributyrin es 99.8 2.6E-18 9E-23 181.4 18.7 242 637-900 5-258 (263)
83 3vis_A Esterase; alpha/beta-hy 99.8 3E-18 1E-22 185.4 18.4 193 647-901 79-278 (306)
84 2c7b_A Carboxylesterase, ESTE1 99.8 2.2E-18 7.4E-23 187.2 17.4 231 637-899 46-309 (311)
85 1jkm_A Brefeldin A esterase; s 99.8 3.2E-18 1.1E-22 189.7 19.0 238 636-898 79-358 (361)
86 1lns_A X-prolyl dipeptidyl ami 99.8 1.8E-18 6.2E-23 207.8 18.2 245 645-902 179-525 (763)
87 1auo_A Carboxylesterase; hydro 99.8 1.2E-17 4.2E-22 170.6 21.7 186 668-898 12-217 (218)
88 1ufo_A Hypothetical protein TT 99.8 2.2E-17 7.4E-22 171.0 22.6 215 643-899 6-236 (238)
89 3pe6_A Monoglyceride lipase; a 99.8 4.4E-17 1.5E-21 175.2 25.4 228 643-900 21-296 (303)
90 1fj2_A Protein (acyl protein t 99.8 1.4E-17 4.8E-22 172.0 20.7 198 656-900 14-230 (232)
91 3fnb_A Acylaminoacyl peptidase 99.8 8.4E-18 2.9E-22 189.6 20.1 233 637-900 133-403 (405)
92 3llc_A Putative hydrolase; str 99.8 2.2E-17 7.7E-22 174.5 21.6 226 639-896 11-268 (270)
93 3og9_A Protein YAHD A copper i 99.8 4.9E-17 1.7E-21 165.1 23.2 180 669-897 16-208 (209)
94 4h0c_A Phospholipase/carboxyle 99.8 1E-17 3.5E-22 169.4 17.6 184 669-895 21-209 (210)
95 1yr2_A Prolyl oligopeptidase; 99.8 1.2E-16 4E-21 195.2 30.3 330 101-569 101-449 (741)
96 1nr0_A Actin interacting prote 99.8 1.9E-16 6.4E-21 189.0 31.4 114 458-620 451-569 (611)
97 4fhz_A Phospholipase/carboxyle 99.8 1.6E-17 5.5E-22 175.7 19.6 198 653-899 53-267 (285)
98 1k8q_A Triacylglycerol lipase, 99.8 3.3E-17 1.1E-21 182.8 23.1 241 636-897 24-377 (377)
99 1nr0_A Actin interacting prote 99.8 4.7E-16 1.6E-20 185.5 34.4 329 110-624 20-361 (611)
100 3ow8_A WD repeat-containing pr 99.8 2.5E-16 8.5E-21 171.6 29.1 268 110-528 34-309 (321)
101 2pbl_A Putative esterase/lipas 99.8 9.4E-18 3.2E-22 177.1 17.2 201 640-878 39-245 (262)
102 1l0q_A Surface layer protein; 99.8 2.9E-15 1E-19 168.0 38.6 355 164-660 13-385 (391)
103 3mve_A FRSA, UPF0255 protein V 99.7 8.4E-18 2.9E-22 189.1 16.4 229 637-899 166-414 (415)
104 2h1i_A Carboxylesterase; struc 99.7 1.2E-16 4E-21 164.5 23.2 181 669-898 37-226 (226)
105 3cn9_A Carboxylesterase; alpha 99.7 1.5E-16 5E-21 163.8 23.5 185 668-898 22-226 (226)
106 3dkr_A Esterase D; alpha beta 99.7 6E-17 2.1E-21 169.0 20.9 203 670-897 22-248 (251)
107 3u0v_A Lysophospholipase-like 99.7 8.9E-17 3E-21 166.9 21.7 189 669-900 22-233 (239)
108 1jji_A Carboxylesterase; alpha 99.7 1.7E-17 5.7E-22 180.0 15.6 226 638-896 55-310 (311)
109 3d7r_A Esterase; alpha/beta fo 99.7 8.1E-17 2.8E-21 175.8 20.6 216 652-899 84-323 (326)
110 3d0k_A Putative poly(3-hydroxy 99.7 2.5E-17 8.5E-22 178.1 16.3 228 639-898 24-288 (304)
111 3bdi_A Uncharacterized protein 99.7 2E-16 6.8E-21 160.0 21.2 199 638-896 3-206 (207)
112 1sfr_A Antigen 85-A; alpha/bet 99.7 1E-16 3.5E-21 172.9 19.6 238 638-900 8-285 (304)
113 3i2k_A Cocaine esterase; alpha 99.7 4.7E-17 1.6E-21 190.7 18.3 237 639-902 9-326 (587)
114 3vl1_A 26S proteasome regulato 99.7 1.8E-15 6.3E-20 171.4 31.0 278 111-528 59-353 (420)
115 3rm3_A MGLP, thermostable mono 99.7 2.8E-16 9.5E-21 166.4 22.6 202 670-898 40-269 (270)
116 1vkh_A Putative serine hydrola 99.7 1E-17 3.5E-22 178.0 11.4 200 668-894 39-272 (273)
117 3b5e_A MLL8374 protein; NP_108 99.7 2.5E-16 8.4E-21 161.7 21.1 196 648-898 14-217 (223)
118 2r8b_A AGR_C_4453P, uncharacte 99.7 1.5E-16 5.2E-21 166.6 19.8 180 669-899 61-249 (251)
119 3zwl_B Eukaryotic translation 99.7 1.2E-15 4E-20 169.3 28.2 274 110-529 34-335 (369)
120 4g56_B MGC81050 protein; prote 99.7 2.2E-16 7.6E-21 174.8 22.1 285 110-529 44-332 (357)
121 1r5m_A SIR4-interacting protei 99.7 2.5E-15 8.6E-20 170.1 31.4 283 108-563 45-363 (425)
122 1gkl_A Endo-1,4-beta-xylanase 99.7 6.3E-16 2.1E-20 165.7 24.2 211 637-877 39-272 (297)
123 4ezi_A Uncharacterized protein 99.7 7.8E-16 2.7E-20 169.2 25.1 244 636-900 40-372 (377)
124 3iuj_A Prolyl endopeptidase; h 99.7 2E-15 6.7E-20 182.5 30.6 273 190-571 130-415 (693)
125 1r88_A MPT51/MPB51 antigen; AL 99.7 1.7E-16 5.9E-21 168.9 18.5 237 636-899 8-274 (280)
126 3vgz_A Uncharacterized protein 99.7 4.3E-15 1.5E-19 163.9 30.2 284 111-530 43-334 (353)
127 3bws_A Protein LP49; two-domai 99.7 6.6E-15 2.2E-19 167.6 32.7 306 188-617 122-431 (433)
128 3fm0_A Protein CIAO1; WDR39,SG 99.7 1.9E-15 6.6E-20 166.4 27.2 287 110-563 18-337 (345)
129 3vgz_A Uncharacterized protein 99.7 1.3E-14 4.4E-19 160.0 33.9 275 191-604 43-334 (353)
130 2qm0_A BES; alpha-beta structu 99.7 3.4E-17 1.2E-21 173.9 12.2 226 636-894 15-272 (275)
131 4f0j_A Probable hydrolytic enz 99.7 5.6E-16 1.9E-20 167.7 22.0 227 638-896 19-313 (315)
132 3iii_A COCE/NOND family hydrol 99.7 7E-17 2.4E-21 186.3 15.2 248 637-902 39-324 (560)
133 1tht_A Thioesterase; 2.10A {Vi 99.7 9.9E-16 3.4E-20 164.9 23.1 227 639-897 7-264 (305)
134 1got_B GT-beta; complex (GTP-b 99.7 5.2E-15 1.8E-19 162.6 28.7 264 110-529 57-332 (340)
135 1gxr_A ESG1, transducin-like e 99.7 1.2E-14 4E-19 158.9 31.0 279 186-615 49-334 (337)
136 2pm9_A Protein WEB1, protein t 99.7 2.1E-15 7.2E-20 170.6 24.9 290 108-528 12-325 (416)
137 1l0q_A Surface layer protein; 99.7 8.8E-15 3E-19 164.1 29.8 241 111-491 34-276 (391)
138 3u4y_A Uncharacterized protein 99.7 2.7E-14 9.3E-19 156.0 32.9 275 164-567 21-310 (331)
139 2j04_A TAU60, YPL007P, hypothe 99.7 1.1E-16 3.9E-21 180.3 13.9 309 110-603 17-350 (588)
140 3nuz_A Putative acetyl xylan e 99.7 2.6E-16 8.8E-21 176.3 16.8 213 634-871 87-346 (398)
141 1qlw_A Esterase; anisotropic r 99.7 6.2E-16 2.1E-20 168.8 18.9 114 760-899 199-322 (328)
142 3u4y_A Uncharacterized protein 99.7 2.9E-14 1E-18 155.8 31.8 298 193-623 2-309 (331)
143 3mkq_A Coatomer beta'-subunit; 99.7 1.1E-14 3.9E-19 180.1 32.0 262 110-523 15-284 (814)
144 2qjw_A Uncharacterized protein 99.7 6E-16 2E-20 152.2 16.2 173 669-896 3-175 (176)
145 3ia2_A Arylesterase; alpha-bet 99.7 2E-15 6.8E-20 159.9 21.1 213 643-895 2-270 (271)
146 2gop_A Trilobed protease; beta 99.7 3.6E-15 1.2E-19 164.3 23.9 275 190-626 16-299 (347)
147 2fx5_A Lipase; alpha-beta hydr 99.7 5.5E-16 1.9E-20 163.1 16.3 188 654-901 34-231 (258)
148 4gqb_B Methylosome protein 50; 99.7 5.4E-15 1.9E-19 162.4 24.9 230 190-528 84-318 (344)
149 2qru_A Uncharacterized protein 99.7 3E-15 1E-19 158.9 22.0 219 643-896 8-273 (274)
150 1erj_A Transcriptional repress 99.7 1.3E-14 4.3E-19 163.0 28.3 233 190-528 125-377 (393)
151 4h5i_A Guanine nucleotide-exch 99.7 3.3E-15 1.1E-19 165.8 23.2 202 190-488 135-343 (365)
152 1vyh_C Platelet-activating fac 99.7 1.3E-14 4.3E-19 164.0 27.6 280 110-529 110-400 (410)
153 3d59_A Platelet-activating fac 99.7 1.2E-15 4.3E-20 170.3 19.2 186 668-901 96-353 (383)
154 3g8y_A SUSD/RAGB-associated es 99.7 8E-16 2.7E-20 172.0 17.4 150 634-795 82-260 (391)
155 1a88_A Chloroperoxidase L; hal 99.7 3.9E-15 1.3E-19 158.1 21.9 214 644-895 3-274 (275)
156 4g56_B MGC81050 protein; prote 99.7 1.7E-14 5.8E-19 159.6 27.8 289 189-618 43-343 (357)
157 3zwl_B Eukaryotic translation 99.7 2.2E-14 7.4E-19 159.0 28.5 317 179-619 25-347 (369)
158 3sfz_A APAF-1, apoptotic pepti 99.7 4.4E-14 1.5E-18 183.5 35.5 279 110-529 617-902 (1249)
159 1zoi_A Esterase; alpha/beta hy 99.7 3.6E-15 1.2E-19 158.5 20.7 214 644-895 4-275 (276)
160 4aez_A CDC20, WD repeat-contai 99.6 4.9E-14 1.7E-18 158.7 30.6 267 163-565 113-384 (401)
161 1tqh_A Carboxylesterase precur 99.6 3.1E-15 1.1E-19 156.1 19.1 200 670-896 16-244 (247)
162 3vdx_A Designed 16NM tetrahedr 99.6 8.8E-15 3E-19 167.0 24.3 223 638-900 2-282 (456)
163 2xzm_R RACK1; ribosome, transl 99.6 4.4E-14 1.5E-18 155.4 29.0 271 110-529 23-329 (343)
164 2y6u_A Peroxisomal membrane pr 99.6 9E-16 3.1E-20 172.8 15.5 234 644-902 25-349 (398)
165 3ow8_A WD repeat-containing pr 99.6 8.8E-15 3E-19 159.2 22.8 233 110-485 82-318 (321)
166 3scy_A Hypothetical bacterial 99.6 5.2E-14 1.8E-18 156.0 29.4 282 164-568 28-346 (361)
167 3hfq_A Uncharacterized protein 99.6 1.8E-14 6.2E-19 158.7 25.4 284 164-569 17-327 (347)
168 4f21_A Carboxylesterase/phosph 99.6 2E-15 6.8E-20 156.3 16.2 129 743-899 117-245 (246)
169 1pby_B Quinohemoprotein amine 99.6 6.1E-14 2.1E-18 153.3 29.0 289 163-569 11-318 (337)
170 3bws_A Protein LP49; two-domai 99.6 4.9E-14 1.7E-18 160.4 29.3 258 164-528 145-419 (433)
171 1a8s_A Chloroperoxidase F; hal 99.6 7.1E-15 2.4E-19 155.9 20.5 212 644-895 3-272 (273)
172 1dqz_A 85C, protein (antigen 8 99.6 2.9E-15 1E-19 159.6 17.5 235 638-899 5-279 (280)
173 4fle_A Esterase; structural ge 99.6 1.1E-15 3.8E-20 154.1 13.2 183 670-895 2-190 (202)
174 3sfz_A APAF-1, apoptotic pepti 99.6 2.2E-14 7.6E-19 186.2 29.0 379 110-622 800-1211(1249)
175 3r0v_A Alpha/beta hydrolase fo 99.6 8.9E-15 3E-19 153.7 20.7 206 643-895 6-261 (262)
176 3frx_A Guanine nucleotide-bind 99.6 3.8E-14 1.3E-18 154.2 26.2 274 110-529 19-306 (319)
177 2ynn_A Coatomer subunit beta'; 99.6 4.3E-14 1.5E-18 152.6 26.2 266 110-527 15-290 (304)
178 2yys_A Proline iminopeptidase- 99.6 5.8E-15 2E-19 157.9 18.9 213 642-896 5-275 (286)
179 1r5m_A SIR4-interacting protei 99.6 1.9E-14 6.4E-19 162.9 24.2 269 110-529 110-414 (425)
180 4ery_A WD repeat-containing pr 99.6 1.3E-13 4.6E-18 149.2 29.8 266 110-528 25-298 (312)
181 2ocg_A Valacyclovir hydrolase; 99.6 4.9E-15 1.7E-19 155.3 17.7 212 647-894 9-253 (254)
182 1a8q_A Bromoperoxidase A1; hal 99.6 2.5E-14 8.4E-19 151.8 23.3 212 644-895 3-273 (274)
183 4gqb_B Methylosome protein 50; 99.6 1E-13 3.5E-18 152.2 28.8 289 190-619 32-332 (344)
184 1imj_A CIB, CCG1-interacting f 99.6 4.3E-16 1.5E-20 158.1 8.9 190 647-896 14-208 (210)
185 3fob_A Bromoperoxidase; struct 99.6 1.7E-14 5.7E-19 153.8 21.7 211 644-895 11-280 (281)
186 1mtz_A Proline iminopeptidase; 99.6 3.7E-15 1.3E-19 159.9 16.7 213 647-897 12-292 (293)
187 1k8k_C P40, ARP2/3 complex 41 99.6 3.6E-14 1.2E-18 157.6 25.1 240 109-488 9-274 (372)
188 3om8_A Probable hydrolase; str 99.6 1.6E-14 5.6E-19 152.5 21.0 211 644-895 9-265 (266)
189 1nir_A Nitrite reductase; hemo 99.6 4.3E-13 1.5E-17 156.4 34.7 322 164-624 160-520 (543)
190 1q0r_A RDMC, aclacinomycin met 99.6 1.8E-14 6E-19 155.1 21.1 210 647-898 8-294 (298)
191 3v48_A Aminohydrolase, putativ 99.6 8.5E-15 2.9E-19 154.9 18.3 198 670-899 15-262 (268)
192 3c8d_A Enterochelin esterase; 99.6 2.4E-15 8.1E-20 168.0 14.4 225 637-898 166-398 (403)
193 2gzs_A IROE protein; enterobac 99.6 4.2E-15 1.4E-19 157.6 15.6 222 638-896 12-264 (278)
194 3u1t_A DMMA haloalkane dehalog 99.6 6E-15 2.1E-19 159.0 17.1 213 648-901 17-300 (309)
195 1brt_A Bromoperoxidase A2; hal 99.6 1.4E-14 4.7E-19 154.1 19.4 209 646-895 9-276 (277)
196 4e54_B DNA damage-binding prot 99.6 5.9E-14 2E-18 159.9 25.9 294 110-565 121-434 (435)
197 3ei3_B DNA damage-binding prot 99.6 7.6E-14 2.6E-18 156.0 26.4 275 110-528 75-371 (383)
198 1erj_A Transcriptional repress 99.6 2.1E-13 7.1E-18 153.1 29.5 287 189-616 65-387 (393)
199 1ri6_A Putative isomerase YBHE 99.6 3E-13 1E-17 148.2 30.1 260 164-528 16-295 (343)
200 3qit_A CURM TE, polyketide syn 99.6 7.1E-15 2.4E-19 156.2 16.5 202 647-888 11-281 (286)
201 1got_B GT-beta; complex (GTP-b 99.6 2.5E-13 8.7E-18 149.1 29.2 265 189-601 56-330 (340)
202 3guu_A Lipase A; protein struc 99.6 3.7E-14 1.3E-18 157.7 22.2 248 638-901 74-409 (462)
203 3dqz_A Alpha-hydroxynitrIle ly 99.6 1.1E-14 3.7E-19 152.7 17.1 198 671-898 5-258 (258)
204 3s25_A Hypothetical 7-bladed b 99.6 1.8E-13 6.2E-18 145.6 26.5 281 194-625 19-300 (302)
205 3qvm_A OLEI00960; structural g 99.6 5.7E-15 2E-19 156.8 14.9 197 670-898 28-279 (282)
206 3e0x_A Lipase-esterase related 99.6 5E-15 1.7E-19 153.7 13.9 195 670-894 16-245 (245)
207 2pl5_A Homoserine O-acetyltran 99.6 2.1E-14 7.1E-19 159.4 19.7 179 708-896 85-364 (366)
208 2r11_A Carboxylesterase NP; 26 99.6 7.5E-15 2.6E-19 158.7 15.7 216 640-895 46-305 (306)
209 1pby_B Quinohemoprotein amine 99.6 6.8E-13 2.3E-17 144.9 31.4 275 218-623 10-315 (337)
210 3fm0_A Protein CIAO1; WDR39,SG 99.6 3.8E-13 1.3E-17 148.0 29.3 230 190-528 18-271 (345)
211 4dnp_A DAD2; alpha/beta hydrol 99.6 9.3E-15 3.2E-19 154.0 15.7 196 670-896 20-268 (269)
212 4h5i_A Guanine nucleotide-exch 99.6 3.6E-13 1.2E-17 149.3 29.1 205 333-619 135-344 (365)
213 3hss_A Putative bromoperoxidas 99.6 7.7E-15 2.6E-19 157.2 14.8 197 670-896 43-290 (293)
214 3oos_A Alpha/beta hydrolase fa 99.6 5.3E-15 1.8E-19 156.7 13.4 206 647-894 10-278 (278)
215 3iz6_a 40S ribosomal protein R 99.6 1.2E-13 4.3E-18 154.1 25.2 279 110-563 68-377 (380)
216 3dw8_B Serine/threonine-protei 99.6 1.5E-13 5.2E-18 156.9 26.4 126 332-491 227-374 (447)
217 3sty_A Methylketone synthase 1 99.6 1.3E-14 4.5E-19 152.9 16.0 199 669-897 11-266 (267)
218 2pbi_B Guanine nucleotide-bind 99.6 9.4E-14 3.2E-18 153.4 23.5 266 110-477 66-348 (354)
219 3hfq_A Uncharacterized protein 99.6 4E-13 1.4E-17 147.9 28.4 300 216-626 15-327 (347)
220 2xe4_A Oligopeptidase B; hydro 99.6 3.5E-13 1.2E-17 163.8 30.5 265 190-571 175-468 (751)
221 3i2n_A WD repeat-containing pr 99.6 8.8E-14 3E-18 153.4 22.9 275 110-528 20-340 (357)
222 3i28_A Epoxide hydrolase 2; ar 99.6 3.1E-14 1.1E-18 167.6 20.5 220 639-899 237-547 (555)
223 2xua_A PCAD, 3-oxoadipate ENOL 99.6 4.2E-14 1.4E-18 149.4 19.4 211 646-895 8-263 (266)
224 3nwo_A PIP, proline iminopepti 99.6 2.9E-14 9.9E-19 155.8 18.5 216 647-898 35-323 (330)
225 3vl1_A 26S proteasome regulato 99.6 1E-12 3.4E-17 148.7 31.9 257 114-488 103-365 (420)
226 2ynn_A Coatomer subunit beta'; 99.6 1.2E-12 4.2E-17 141.0 30.5 245 189-569 14-267 (304)
227 3kxp_A Alpha-(N-acetylaminomet 99.6 2.7E-14 9.3E-19 154.8 16.9 207 647-895 55-313 (314)
228 3ei3_B DNA damage-binding prot 99.6 2.7E-12 9.1E-17 143.4 33.7 300 189-618 74-382 (383)
229 1vyh_C Platelet-activating fac 99.6 6.8E-13 2.3E-17 149.7 28.9 265 189-600 109-397 (410)
230 4ery_A WD repeat-containing pr 99.6 3.2E-12 1.1E-16 138.3 33.0 268 189-602 24-298 (312)
231 1nir_A Nitrite reductase; hemo 99.6 1.4E-12 4.7E-17 152.1 32.1 310 111-570 181-523 (543)
232 3s25_A Hypothetical 7-bladed b 99.6 8.6E-13 2.9E-17 140.4 27.7 255 115-528 20-280 (302)
233 1ri6_A Putative isomerase YBHE 99.6 8.6E-13 2.9E-17 144.5 28.7 257 110-491 39-311 (343)
234 1hkh_A Gamma lactamase; hydrol 99.6 2.9E-14 1E-18 151.7 16.3 176 704-895 42-278 (279)
235 2pbi_B Guanine nucleotide-bind 99.6 1.2E-12 4.1E-17 144.5 29.7 268 189-601 65-344 (354)
236 2d81_A PHB depolymerase; alpha 99.6 8.9E-15 3E-19 155.9 11.9 190 753-947 5-229 (318)
237 4g9e_A AHL-lactonase, alpha/be 99.6 1.6E-14 5.5E-19 153.1 13.9 220 639-900 3-272 (279)
238 3fsg_A Alpha/beta superfamily 99.6 1.3E-14 4.6E-19 153.0 13.2 211 648-898 9-269 (272)
239 3i1i_A Homoserine O-acetyltran 99.6 4.8E-14 1.6E-18 157.0 18.1 71 825-898 302-373 (377)
240 1c4x_A BPHD, protein (2-hydrox 99.6 4.5E-14 1.6E-18 150.8 17.0 216 644-896 11-284 (285)
241 2qs9_A Retinoblastoma-binding 99.6 4.3E-14 1.5E-18 141.4 15.7 184 669-899 3-187 (194)
242 2vdu_B TRNA (guanine-N(7)-)-me 99.6 7.5E-13 2.6E-17 151.5 28.0 192 190-486 104-337 (450)
243 4ggc_A P55CDC, cell division c 99.6 1.3E-12 4.6E-17 141.3 28.7 252 164-529 46-304 (318)
244 3iz6_a 40S ribosomal protein R 99.6 2.1E-12 7.3E-17 144.0 31.0 298 189-620 67-377 (380)
245 4gga_A P55CDC, cell division c 99.6 8.4E-13 2.9E-17 149.6 28.1 252 164-529 126-384 (420)
246 2oaj_A Protein SNI1; WD40 repe 99.5 7.5E-13 2.6E-17 164.1 29.8 190 110-378 19-245 (902)
247 3mkq_A Coatomer beta'-subunit; 99.5 1E-12 3.4E-17 162.6 31.0 245 189-569 14-267 (814)
248 1wm1_A Proline iminopeptidase; 99.5 5.9E-14 2E-18 152.4 17.4 120 641-793 16-139 (317)
249 3h2g_A Esterase; xanthomonas o 99.5 8.1E-14 2.8E-18 156.4 18.9 150 637-795 44-210 (397)
250 3dwl_C Actin-related protein 2 99.5 4.6E-14 1.6E-18 157.3 16.4 236 110-474 13-270 (377)
251 2b61_A Homoserine O-acetyltran 99.5 1E-13 3.6E-18 154.4 18.8 178 708-896 94-376 (377)
252 3frx_A Guanine nucleotide-bind 99.5 1.2E-12 4E-17 142.3 26.6 283 189-618 18-317 (319)
253 2puj_A 2-hydroxy-6-OXO-6-pheny 99.5 6.3E-14 2.2E-18 149.8 16.2 174 706-896 58-285 (286)
254 1sq9_A Antiviral protein SKI8; 99.5 7.1E-13 2.4E-17 148.7 25.6 243 110-491 18-323 (397)
255 1azw_A Proline iminopeptidase; 99.5 1.7E-13 5.7E-18 148.4 19.5 120 641-793 13-136 (313)
256 2rau_A Putative esterase; NP_3 99.5 8.2E-14 2.8E-18 153.9 16.7 179 704-897 85-353 (354)
257 1uxo_A YDEN protein; hydrolase 99.5 5.3E-14 1.8E-18 140.4 13.7 183 670-899 4-188 (192)
258 1iup_A META-cleavage product h 99.5 2.7E-13 9.2E-18 144.5 20.0 171 710-896 52-272 (282)
259 2pm9_A Protein WEB1, protein t 99.5 5E-13 1.7E-17 150.9 23.2 297 190-620 14-339 (416)
260 2e3j_A Epoxide hydrolase EPHB; 99.5 1E-13 3.5E-18 153.3 17.1 119 646-794 9-131 (356)
261 4aow_A Guanine nucleotide-bind 99.5 3.9E-12 1.3E-16 139.1 29.2 283 110-563 40-339 (340)
262 3scy_A Hypothetical bacterial 99.5 3.5E-12 1.2E-16 141.2 29.1 263 107-491 48-340 (361)
263 2xzm_R RACK1; ribosome, transl 99.5 3.6E-12 1.2E-16 140.1 28.7 301 189-619 22-341 (343)
264 3g9x_A Haloalkane dehalogenase 99.5 5.9E-14 2E-18 150.5 14.1 210 647-896 17-292 (299)
265 2cjp_A Epoxide hydrolase; HET: 99.5 2E-13 6.8E-18 149.0 18.5 117 645-793 16-138 (328)
266 2wue_A 2-hydroxy-6-OXO-6-pheny 99.5 2.6E-13 8.7E-18 145.4 18.7 215 644-895 17-288 (291)
267 1pgu_A Actin interacting prote 99.5 1.8E-12 6.3E-17 154.5 28.2 244 110-491 20-284 (615)
268 3gff_A IROE-like serine hydrol 99.5 5.2E-14 1.8E-18 151.9 13.0 221 638-899 11-267 (331)
269 1j1i_A META cleavage compound 99.5 2.5E-13 8.6E-18 145.9 18.3 215 647-899 23-284 (296)
270 1wom_A RSBQ, sigma factor SIGB 99.5 8.2E-14 2.8E-18 147.6 14.1 197 670-898 20-271 (271)
271 3bf7_A Esterase YBFF; thioeste 99.5 2.4E-13 8.1E-18 142.5 16.9 196 670-897 16-255 (255)
272 4fol_A FGH, S-formylglutathion 99.5 1.3E-13 4.5E-18 146.1 14.9 245 638-899 13-297 (299)
273 3p2m_A Possible hydrolase; alp 99.5 7.8E-14 2.7E-18 152.5 13.5 205 649-896 69-329 (330)
274 1jmx_B Amine dehydrogenase; ox 99.5 4.4E-12 1.5E-16 139.2 27.8 304 113-568 4-332 (349)
275 3k26_A Polycomb protein EED; W 99.5 1.6E-12 5.4E-17 143.7 23.8 261 164-529 45-355 (366)
276 4e54_B DNA damage-binding prot 99.5 2.3E-12 7.8E-17 146.7 25.5 304 189-622 120-434 (435)
277 3bwx_A Alpha/beta hydrolase; Y 99.5 7.5E-13 2.6E-17 141.2 20.2 217 639-896 5-284 (285)
278 2wfl_A Polyneuridine-aldehyde 99.5 4E-13 1.4E-17 141.6 17.7 196 670-895 10-263 (264)
279 1b6g_A Haloalkane dehalogenase 99.5 3.7E-13 1.3E-17 145.5 17.8 207 650-896 34-308 (310)
280 3dw8_B Serine/threonine-protei 99.5 9.3E-12 3.2E-16 142.0 30.5 177 332-570 178-382 (447)
281 3r40_A Fluoroacetate dehalogen 99.5 2.1E-13 7.1E-18 146.6 15.7 212 644-897 17-303 (306)
282 1yfq_A Cell cycle arrest prote 99.5 1.5E-12 5.1E-17 142.7 22.8 267 110-530 13-313 (342)
283 3dm0_A Maltose-binding peripla 99.5 3.4E-12 1.2E-16 154.7 28.0 238 110-491 384-633 (694)
284 1u2e_A 2-hydroxy-6-ketonona-2, 99.5 4.8E-13 1.6E-17 143.1 18.0 170 710-895 64-287 (289)
285 1xkl_A SABP2, salicylic acid-b 99.5 4.4E-13 1.5E-17 142.0 17.6 199 670-898 4-260 (273)
286 2xmz_A Hydrolase, alpha/beta h 99.5 1.4E-13 4.9E-18 145.5 13.3 194 671-897 17-266 (269)
287 3bdv_A Uncharacterized protein 99.5 4.7E-13 1.6E-17 133.3 16.3 127 737-897 59-187 (191)
288 1pgu_A Actin interacting prote 99.5 4.7E-12 1.6E-16 151.0 28.0 176 111-352 67-273 (615)
289 2qvb_A Haloalkane dehalogenase 99.5 1.9E-13 6.6E-18 146.3 14.4 209 646-898 14-293 (297)
290 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.2E-11 4E-16 141.5 29.8 214 332-625 150-399 (450)
291 2xt0_A Haloalkane dehalogenase 99.5 8E-13 2.7E-17 141.9 18.8 208 650-895 33-296 (297)
292 3fla_A RIFR; alpha-beta hydrol 99.5 5.1E-13 1.7E-17 140.7 16.8 197 669-898 19-250 (267)
293 3i2n_A WD repeat-containing pr 99.5 3.6E-12 1.2E-16 140.4 24.0 302 189-619 19-354 (357)
294 1k8k_C P40, ARP2/3 complex 41 99.5 2.3E-12 8E-17 142.9 22.3 226 189-527 9-262 (372)
295 3c6x_A Hydroxynitrilase; atomi 99.5 3.4E-13 1.2E-17 141.5 14.6 197 671-897 4-256 (257)
296 2q0x_A Protein DUF1749, unchar 99.5 5.6E-13 1.9E-17 145.5 16.8 198 670-898 38-295 (335)
297 2pm7_B Protein transport prote 99.5 4.8E-12 1.6E-16 135.9 23.7 244 110-490 11-287 (297)
298 1m33_A BIOH protein; alpha-bet 99.5 2.8E-13 9.4E-18 142.2 13.3 170 706-896 34-255 (258)
299 1ycd_A Hypothetical 27.3 kDa p 99.5 7.1E-14 2.4E-18 145.4 8.4 149 740-900 83-240 (243)
300 1sq9_A Antiviral protein SKI8; 99.5 2E-11 6.7E-16 136.8 29.1 250 189-569 17-330 (397)
301 2vat_A Acetyl-COA--deacetylcep 99.5 2.8E-13 9.7E-18 154.6 14.0 68 824-898 375-443 (444)
302 1mj5_A 1,3,4,6-tetrachloro-1,4 99.5 4.3E-13 1.5E-17 144.1 14.5 211 645-899 14-295 (302)
303 3dwl_C Actin-related protein 2 99.5 3.4E-13 1.2E-17 150.3 14.1 229 190-528 13-270 (377)
304 1pja_A Palmitoyl-protein thioe 99.5 6.9E-13 2.4E-17 142.8 16.1 196 670-894 36-301 (302)
305 2aq5_A Coronin-1A; WD40 repeat 99.4 4.9E-12 1.7E-16 142.3 23.6 251 164-525 58-329 (402)
306 1isp_A Lipase; alpha/beta hydr 99.4 1.9E-12 6.6E-17 127.6 17.7 169 670-897 3-176 (181)
307 4g4g_A 4-O-methyl-glucuronoyl 99.4 3.9E-12 1.3E-16 135.6 20.8 212 651-903 124-384 (433)
308 3pic_A CIP2; alpha/beta hydrol 99.4 3.5E-12 1.2E-16 134.8 20.2 213 650-902 90-349 (375)
309 3afi_E Haloalkane dehalogenase 99.4 1E-12 3.6E-17 142.5 16.5 212 647-898 14-302 (316)
310 2j04_A TAU60, YPL007P, hypothe 99.4 1.8E-12 6.2E-17 146.2 18.7 187 332-604 86-288 (588)
311 1jmx_B Amine dehydrogenase; ox 99.4 3.7E-11 1.3E-15 131.8 29.1 289 193-622 4-329 (349)
312 3odt_A Protein DOA1; ubiquitin 99.4 1.6E-11 5.6E-16 132.2 25.6 275 110-565 20-300 (313)
313 4aow_A Guanine nucleotide-bind 99.4 6.7E-11 2.3E-15 129.2 30.7 290 189-620 39-339 (340)
314 1ehy_A Protein (soluble epoxid 99.4 6E-12 2.1E-16 134.9 21.8 206 647-894 16-293 (294)
315 4aez_A CDC20, WD repeat-contai 99.4 3.5E-11 1.2E-15 135.2 29.1 283 190-621 95-383 (401)
316 3ibt_A 1H-3-hydroxy-4-oxoquino 99.4 1.1E-12 3.6E-17 138.0 15.3 210 648-895 7-263 (264)
317 3kda_A CFTR inhibitory factor 99.4 7.4E-13 2.5E-17 142.1 14.1 209 645-897 15-294 (301)
318 1yfq_A Cell cycle arrest prote 99.4 2.4E-11 8.2E-16 133.0 26.1 245 189-569 12-290 (342)
319 4a11_B DNA excision repair pro 99.4 3.3E-11 1.1E-15 135.3 27.2 298 110-565 45-369 (408)
320 2hes_X YDR267CP; beta-propelle 99.4 1.6E-11 5.4E-16 134.0 23.8 269 110-529 16-317 (330)
321 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.9E-11 9.8E-16 134.0 25.6 273 164-528 15-328 (365)
322 2j04_B YDR362CP, TAU91; beta p 99.4 2.6E-11 8.8E-16 140.3 25.9 258 109-490 134-428 (524)
323 3bg1_A Protein SEC13 homolog; 99.4 8E-12 2.7E-16 135.5 20.2 247 110-490 15-295 (316)
324 3jrp_A Fusion protein of prote 99.4 1.3E-11 4.3E-16 137.1 21.8 241 110-489 13-288 (379)
325 3dm0_A Maltose-binding peripla 99.4 9.8E-11 3.4E-15 141.8 31.2 291 189-616 383-691 (694)
326 2qmq_A Protein NDRG2, protein 99.4 6E-12 2.1E-16 134.1 17.8 214 648-895 19-285 (286)
327 1jof_A Carboxy-CIS,CIS-muconat 99.4 3E-11 1E-15 133.9 23.6 262 110-488 41-341 (365)
328 2oaj_A Protein SNI1; WD40 repe 99.4 9.1E-11 3.1E-15 145.4 30.2 110 110-233 100-247 (902)
329 3vu4_A KMHSV2; beta-propeller 99.4 5.7E-11 1.9E-15 131.0 25.4 241 109-487 20-270 (355)
330 2aq5_A Coronin-1A; WD40 repeat 99.4 5.6E-11 1.9E-15 133.6 25.2 287 191-624 37-348 (402)
331 3odt_A Protein DOA1; ubiquitin 99.4 1.5E-10 5.2E-15 124.6 27.7 273 189-621 19-299 (313)
332 3qmv_A Thioesterase, REDJ; alp 99.4 4.5E-13 1.5E-17 142.6 7.4 192 671-893 52-279 (280)
333 3mmy_A MRNA export factor; mRN 99.4 8E-11 2.7E-15 129.9 25.3 265 110-529 41-335 (368)
334 2psd_A Renilla-luciferin 2-mon 99.4 4.5E-12 1.5E-16 137.6 14.6 209 647-898 28-306 (318)
335 1qe3_A PNB esterase, para-nitr 99.4 4.1E-13 1.4E-17 153.3 6.3 210 652-879 83-316 (489)
336 3v7d_B Cell division control p 99.3 5.6E-10 1.9E-14 128.0 31.7 256 163-566 142-426 (464)
337 3k26_A Polycomb protein EED; W 99.3 7.5E-11 2.6E-15 130.1 23.5 287 189-617 19-365 (366)
338 1r3d_A Conserved hypothetical 99.3 9.2E-12 3.2E-16 131.1 15.2 194 670-898 16-263 (264)
339 2pm7_B Protein transport prote 99.3 1.3E-10 4.4E-15 124.6 24.1 227 189-528 10-273 (297)
340 3f3f_A Nucleoporin SEH1; struc 99.3 5.4E-11 1.9E-15 129.9 21.4 103 110-261 13-130 (351)
341 3b12_A Fluoroacetate dehalogen 99.0 1.2E-13 4E-18 148.5 0.0 197 670-898 25-293 (304)
342 3jrp_A Fusion protein of prote 99.3 1.7E-10 5.9E-15 127.9 25.7 229 189-529 12-276 (379)
343 4a11_B DNA excision repair pro 99.3 5.9E-10 2E-14 124.9 29.7 291 189-621 44-368 (408)
344 3l80_A Putative uncharacterize 99.3 6.8E-13 2.3E-17 141.9 5.2 168 710-897 67-289 (292)
345 4gga_A P55CDC, cell division c 99.3 1.1E-09 3.9E-14 123.7 31.7 281 189-619 106-396 (420)
346 2wj6_A 1H-3-hydroxy-4-oxoquina 99.3 2.9E-11 9.8E-16 128.2 16.4 214 647-897 11-272 (276)
347 3bg1_A Protein SEC13 homolog; 99.3 1.2E-10 4E-15 126.2 19.6 244 189-529 14-282 (316)
348 2oiz_A Aromatic amine dehydrog 99.3 6.8E-10 2.3E-14 122.5 25.4 131 336-491 204-335 (361)
349 3gre_A Serine/threonine-protei 99.3 1.6E-10 5.4E-15 131.4 20.8 244 110-491 65-360 (437)
350 2mad_H Methylamine dehydrogena 99.3 1.3E-09 4.4E-14 120.4 27.0 135 335-491 216-351 (373)
351 1qks_A Cytochrome CD1 nitrite 99.3 9E-09 3.1E-13 119.5 35.3 322 164-623 178-543 (567)
352 2hes_X YDR267CP; beta-propelle 99.2 4.8E-10 1.6E-14 122.2 22.5 238 110-486 60-326 (330)
353 4i19_A Epoxide hydrolase; stru 99.2 2.3E-10 7.8E-15 127.1 20.0 117 647-793 75-203 (388)
354 3jro_A Fusion protein of prote 99.2 1.3E-10 4.5E-15 141.7 18.0 240 110-489 11-284 (753)
355 2j04_B YDR362CP, TAU91; beta p 99.2 2E-10 7E-15 132.7 18.3 264 110-528 209-505 (524)
356 2mad_H Methylamine dehydrogena 99.2 2.3E-08 7.7E-13 110.4 33.4 283 164-567 48-356 (373)
357 3qyj_A ALR0039 protein; alpha/ 99.2 5.8E-10 2E-14 119.1 19.9 209 646-896 11-290 (291)
358 2oiz_A Aromatic amine dehydrog 99.2 1.5E-08 5.2E-13 111.6 31.7 280 163-565 31-338 (361)
359 3c5v_A PME-1, protein phosphat 99.2 1.8E-10 6.2E-15 124.7 15.8 196 670-897 38-300 (316)
360 4ggc_A P55CDC, cell division c 99.2 1.1E-08 3.7E-13 110.3 29.5 282 190-618 27-315 (318)
361 3mmy_A MRNA export factor; mRN 99.2 1.4E-09 4.9E-14 119.8 22.7 266 189-604 40-336 (368)
362 3lcr_A Tautomycetin biosynthet 99.2 4.2E-10 1.5E-14 121.6 17.5 174 710-898 107-303 (319)
363 1qks_A Cytochrome CD1 nitrite 99.2 1.4E-08 4.8E-13 118.0 31.4 298 164-569 219-546 (567)
364 2xyi_A Probable histone-bindin 99.2 1.6E-09 5.4E-14 122.9 23.0 242 108-487 128-409 (430)
365 1kez_A Erythronolide synthase; 99.2 1.3E-10 4.4E-15 124.8 12.9 200 669-898 66-282 (300)
366 3e5z_A Putative gluconolactona 99.2 3.7E-09 1.3E-13 113.1 24.1 252 111-491 30-287 (296)
367 2xyi_A Probable histone-bindin 99.1 1.2E-08 3.9E-13 115.7 29.0 197 189-488 129-353 (430)
368 2ovr_B FBW7, F-BOX/WD repeat p 99.1 3.1E-08 1.1E-12 112.7 32.7 314 115-618 124-442 (445)
369 3ds8_A LIN2722 protein; unkonw 99.1 5.8E-10 2E-14 116.2 16.4 154 735-898 72-243 (254)
370 3fle_A SE_1780 protein; struct 99.1 8.1E-10 2.8E-14 113.7 16.6 152 737-894 77-247 (249)
371 3c75_H MADH, methylamine dehyd 99.1 6.8E-09 2.3E-13 115.1 25.1 134 336-491 269-403 (426)
372 3jro_A Fusion protein of prote 99.1 1.4E-09 4.7E-14 132.7 21.4 232 189-528 10-273 (753)
373 3e5z_A Putative gluconolactona 99.1 8.8E-09 3E-13 110.1 25.1 246 190-565 29-290 (296)
374 3lp5_A Putative cell surface h 99.1 9.7E-10 3.3E-14 113.1 16.4 145 736-895 77-232 (250)
375 3lrv_A PRE-mRNA-splicing facto 99.1 6.9E-09 2.4E-13 113.6 24.4 135 314-490 149-294 (343)
376 3lrv_A PRE-mRNA-splicing facto 99.1 5.7E-09 1.9E-13 114.3 23.5 166 314-528 104-279 (343)
377 3v7d_B Cell division control p 99.1 2.6E-08 8.9E-13 114.0 29.6 284 195-623 127-426 (464)
378 2dg1_A DRP35, lactonase; beta 99.1 7.5E-09 2.5E-13 112.7 23.5 238 164-490 67-316 (333)
379 2dg1_A DRP35, lactonase; beta 99.1 1.8E-08 6.1E-13 109.7 26.4 237 190-530 46-300 (333)
380 2ghs_A AGR_C_1268P; regucalcin 99.1 1.5E-08 5.3E-13 109.9 24.9 234 112-477 52-293 (326)
381 3c75_H MADH, methylamine dehyd 99.1 2.6E-08 9E-13 110.4 26.8 275 164-568 100-409 (426)
382 3f3f_A Nucleoporin SEH1; struc 99.1 6.7E-09 2.3E-13 113.1 21.5 205 189-487 12-248 (351)
383 1ukc_A ESTA, esterase; fungi, 99.1 6.1E-10 2.1E-14 128.1 13.1 211 646-878 82-327 (522)
384 4gq1_A NUP37; propeller, trans 99.0 3.6E-09 1.2E-13 118.3 18.9 267 112-476 93-380 (393)
385 3sjl_D Methylamine dehydrogena 99.0 4.3E-08 1.5E-12 106.7 26.6 269 113-491 82-364 (386)
386 3vu4_A KMHSV2; beta-propeller 99.0 8.6E-09 2.9E-13 113.5 21.6 232 189-563 20-273 (355)
387 3sjl_D Methylamine dehydrogena 99.0 1.6E-07 5.6E-12 102.1 30.1 281 163-571 59-373 (386)
388 3dr2_A Exported gluconolactona 99.0 2.1E-08 7.1E-13 107.7 23.1 253 111-488 47-304 (305)
389 3ils_A PKS, aflatoxin biosynth 99.0 9.5E-10 3.2E-14 115.6 12.1 197 670-894 21-264 (265)
390 3dr2_A Exported gluconolactona 99.0 5E-08 1.7E-12 104.7 24.7 228 314-616 67-304 (305)
391 3gre_A Serine/threonine-protei 99.0 1.6E-08 5.5E-13 114.7 21.0 212 109-440 112-357 (437)
392 3g4e_A Regucalcin; six bladed 99.0 5.4E-08 1.9E-12 104.0 23.8 239 113-476 17-262 (297)
393 3g4e_A Regucalcin; six bladed 99.0 5E-08 1.7E-12 104.3 23.0 233 191-529 15-261 (297)
394 3g02_A Epoxide hydrolase; alph 99.0 1.1E-08 3.6E-13 114.0 18.0 212 648-898 93-397 (408)
395 1tca_A Lipase; hydrolase(carbo 99.0 2.4E-09 8.3E-14 114.9 12.1 210 649-896 13-243 (317)
396 2ghs_A AGR_C_1268P; regucalcin 98.9 1.5E-07 5.1E-12 102.1 25.7 227 191-529 51-291 (326)
397 2h7c_A Liver carboxylesterase 98.9 1.6E-09 5.5E-14 125.3 9.1 132 646-795 95-233 (542)
398 4gq1_A NUP37; propeller, trans 98.9 4.7E-08 1.6E-12 109.2 18.5 240 192-528 93-378 (393)
399 1p22_A F-BOX/WD-repeat protein 98.9 2.4E-07 8.1E-12 105.0 24.5 220 114-486 137-363 (435)
400 2ogt_A Thermostable carboxyles 98.9 3.8E-09 1.3E-13 120.8 9.5 132 646-795 81-224 (498)
401 2k2q_B Surfactin synthetase th 98.8 3.8E-09 1.3E-13 109.2 8.0 169 710-897 37-237 (242)
402 1ei9_A Palmitoyl protein thioe 98.8 3.4E-08 1.2E-12 104.0 15.3 86 704-794 27-116 (279)
403 2ha2_A ACHE, acetylcholinester 98.8 2.8E-09 9.6E-14 123.3 6.7 132 646-794 93-232 (543)
404 1gpl_A RP2 lipase; serine este 98.8 5.5E-09 1.9E-13 117.2 8.6 160 670-877 70-236 (432)
405 1p0i_A Cholinesterase; serine 98.7 8.2E-09 2.8E-13 119.1 7.6 132 646-795 89-228 (529)
406 2fj0_A JuvenIle hormone estera 98.7 3.7E-09 1.3E-13 122.4 4.5 130 652-794 91-233 (551)
407 2ece_A 462AA long hypothetical 98.7 2.8E-06 9.7E-11 92.8 26.3 228 191-474 140-399 (462)
408 2ovr_B FBW7, F-BOX/WD repeat p 98.7 7.8E-06 2.7E-10 92.7 31.2 268 195-622 124-395 (445)
409 1mda_H Methylamine dehydrogena 98.7 5.4E-07 1.8E-11 98.2 20.1 253 220-569 47-354 (368)
410 1ea5_A ACHE, acetylcholinester 98.7 1.2E-08 4.1E-13 117.7 7.3 132 646-795 91-230 (537)
411 1llf_A Lipase 3; candida cylin 98.7 3.2E-08 1.1E-12 113.9 9.1 130 652-793 98-243 (534)
412 2hfk_A Pikromycin, type I poly 98.6 7E-08 2.4E-12 104.3 10.5 174 710-898 115-312 (319)
413 1npe_A Nidogen, entactin; glyc 98.6 4.3E-06 1.5E-10 87.5 23.8 190 200-491 1-199 (267)
414 2ece_A 462AA long hypothetical 98.6 5.5E-05 1.9E-09 82.7 32.7 118 336-475 142-272 (462)
415 1npe_A Nidogen, entactin; glyc 98.6 6E-06 2E-10 86.4 24.7 200 190-491 37-239 (267)
416 1thg_A Lipase; hydrolase(carbo 98.6 3.4E-08 1.2E-12 113.9 7.8 134 646-793 102-251 (544)
417 1p22_A F-BOX/WD-repeat protein 98.6 3.2E-06 1.1E-10 95.5 24.2 212 195-528 138-353 (435)
418 2w18_A PALB2, fancn, partner a 98.6 1.7E-06 5.9E-11 91.6 20.0 125 110-261 113-244 (356)
419 3dsm_A Uncharacterized protein 98.6 3.4E-06 1.2E-10 91.3 22.8 191 199-491 52-254 (328)
420 1dx4_A ACHE, acetylcholinester 98.6 5.7E-08 1.9E-12 113.2 9.2 115 668-794 139-267 (585)
421 3dsm_A Uncharacterized protein 98.6 3.2E-06 1.1E-10 91.5 22.5 231 164-490 65-302 (328)
422 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 4.4E-06 1.5E-10 89.5 23.4 218 190-490 72-299 (314)
423 2bce_A Cholesterol esterase; h 98.6 3.3E-08 1.1E-12 114.4 6.5 140 645-793 76-222 (579)
424 2oit_A Nucleoporin 214KDA; NH2 98.6 2.2E-06 7.6E-11 96.7 21.4 104 332-476 150-261 (434)
425 2cb9_A Fengycin synthetase; th 98.6 3.3E-07 1.1E-11 94.7 13.3 163 710-897 46-225 (244)
426 2oit_A Nucleoporin 214KDA; NH2 98.6 1.4E-06 4.8E-11 98.3 19.5 151 189-416 93-258 (434)
427 3hrp_A Uncharacterized protein 98.6 1.2E-05 4E-10 89.8 26.6 225 164-487 153-407 (409)
428 3n2z_B Lysosomal Pro-X carboxy 98.5 3.9E-07 1.3E-11 101.4 12.6 86 707-795 63-162 (446)
429 1mda_H Methylamine dehydrogena 98.5 1.5E-06 5.1E-11 94.7 16.9 287 164-491 47-347 (368)
430 2w18_A PALB2, fancn, partner a 98.5 5.5E-06 1.9E-10 87.8 20.2 147 313-486 202-355 (356)
431 3bix_A Neuroligin-1, neuroligi 98.5 5.1E-08 1.8E-12 113.3 4.8 128 652-793 112-248 (574)
432 1ys1_X Lipase; CIS peptide Leu 98.5 5.8E-07 2E-11 96.2 12.7 106 670-794 8-114 (320)
433 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 8.5E-06 2.9E-10 87.3 22.1 246 190-528 19-286 (314)
434 3tej_A Enterobactin synthase c 98.5 4.7E-07 1.6E-11 98.1 12.1 170 710-894 125-327 (329)
435 1rwi_B Serine/threonine-protei 98.5 2.1E-05 7.3E-10 82.0 23.4 195 190-491 25-223 (270)
436 1jmk_C SRFTE, surfactin synthe 98.5 6E-07 2.1E-11 91.7 11.0 156 713-894 43-226 (230)
437 1rwi_B Serine/threonine-protei 98.4 3.6E-05 1.2E-09 80.3 24.9 193 190-490 68-264 (270)
438 3v65_B Low-density lipoprotein 98.4 6.3E-05 2.2E-09 83.1 27.5 188 313-569 95-285 (386)
439 3hrp_A Uncharacterized protein 98.4 4.6E-05 1.6E-09 85.0 26.5 201 190-491 132-355 (409)
440 1bu8_A Protein (pancreatic lip 98.4 3.9E-07 1.3E-11 102.4 9.5 108 670-793 70-180 (452)
441 1q7f_A NHL, brain tumor CG1071 98.4 2.7E-05 9.1E-10 82.2 23.4 120 314-474 142-268 (286)
442 3icv_A Lipase B, CALB; circula 98.4 1.2E-06 4.1E-11 92.2 12.2 118 652-795 50-170 (316)
443 1fwx_A Nitrous oxide reductase 98.4 1E-05 3.5E-10 91.7 20.3 260 164-475 113-407 (595)
444 3fvz_A Peptidyl-glycine alpha- 98.4 1.3E-05 4.4E-10 86.7 20.7 121 333-490 197-322 (329)
445 1q7f_A NHL, brain tumor CG1071 98.4 2.8E-05 9.7E-10 82.0 22.9 201 190-490 31-238 (286)
446 1w52_X Pancreatic lipase relat 98.4 5.7E-07 2E-11 101.0 9.7 108 670-793 70-180 (452)
447 3v65_B Low-density lipoprotein 98.4 7.6E-05 2.6E-09 82.5 25.8 180 218-491 95-278 (386)
448 3v64_C Agrin; beta propeller, 98.4 0.00016 5.6E-09 78.6 28.0 188 313-569 52-242 (349)
449 3fvz_A Peptidyl-glycine alpha- 98.3 6.8E-05 2.3E-09 81.0 24.8 235 314-617 69-321 (329)
450 1ex9_A Lactonizing lipase; alp 98.3 2.2E-06 7.4E-11 90.5 12.3 103 670-794 7-109 (285)
451 1ijq_A LDL receptor, low-densi 98.3 0.00022 7.4E-09 76.4 27.9 188 313-569 9-203 (316)
452 3no2_A Uncharacterized protein 98.3 0.00017 5.7E-09 75.6 25.9 182 215-491 11-196 (276)
453 1fwx_A Nitrous oxide reductase 98.3 3.5E-05 1.2E-09 87.3 21.5 209 190-490 86-308 (595)
454 1ijq_A LDL receptor, low-densi 98.3 0.00023 7.9E-09 76.2 27.1 219 164-491 11-239 (316)
455 3v64_C Agrin; beta propeller, 98.3 0.00017 5.8E-09 78.4 26.2 180 218-491 52-235 (349)
456 1hpl_A Lipase; hydrolase(carbo 98.3 2E-06 6.8E-11 96.0 9.8 108 670-793 69-179 (449)
457 3s94_A LRP-6, low-density lipo 98.2 0.0035 1.2E-07 73.4 37.9 228 312-624 324-557 (619)
458 2z2n_A Virginiamycin B lyase; 98.2 0.00021 7.2E-09 75.4 25.4 191 190-489 58-254 (299)
459 3no2_A Uncharacterized protein 98.2 0.00017 5.9E-09 75.5 23.4 79 164-261 16-94 (276)
460 2x5x_A PHB depolymerase PHAZ7; 98.2 2.5E-06 8.6E-11 91.6 8.9 88 703-795 72-166 (342)
461 3p5b_L Low density lipoprotein 98.2 0.00038 1.3E-08 77.1 27.0 225 313-620 91-322 (400)
462 3p5b_L Low density lipoprotein 98.2 0.00048 1.6E-08 76.4 27.4 180 218-491 91-278 (400)
463 1rp1_A Pancreatic lipase relat 98.2 3.4E-06 1.1E-10 94.2 9.6 107 670-793 70-179 (450)
464 2zyr_A Lipase, putative; fatty 98.2 2.5E-06 8.4E-11 94.7 7.9 166 670-896 22-229 (484)
465 3sov_A LRP-6, low-density lipo 98.2 0.0003 1E-08 75.2 24.0 224 313-621 12-241 (318)
466 2z2n_A Virginiamycin B lyase; 98.1 0.0013 4.6E-08 69.1 28.4 191 190-488 16-211 (299)
467 3sov_A LRP-6, low-density lipo 98.1 0.00051 1.7E-08 73.4 23.7 143 314-499 57-204 (318)
468 2dst_A Hypothetical protein TT 98.0 1.2E-05 4.1E-10 73.6 8.7 64 710-782 40-103 (131)
469 1n7d_A LDL receptor, low-densi 98.0 0.00011 3.9E-09 87.6 19.4 227 313-622 385-618 (699)
470 3m0c_C LDL receptor, low-densi 98.0 0.0013 4.4E-08 79.0 28.3 225 313-620 403-634 (791)
471 3m0c_C LDL receptor, low-densi 98.0 0.0012 4E-08 79.3 26.5 180 218-491 403-590 (791)
472 2qc5_A Streptogramin B lactona 98.0 0.0025 8.4E-08 67.1 26.6 193 190-490 63-260 (300)
473 3s94_A LRP-6, low-density lipo 98.0 0.05 1.7E-06 63.6 39.8 124 458-625 351-474 (619)
474 2p4o_A Hypothetical protein; p 97.9 0.0011 3.9E-08 70.4 23.5 238 182-528 25-276 (306)
475 2iwa_A Glutamine cyclotransfer 97.9 0.00046 1.6E-08 70.9 19.1 198 191-490 23-237 (266)
476 1n7d_A LDL receptor, low-densi 97.9 0.00026 9E-09 84.4 20.1 180 218-491 385-572 (699)
477 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0034 1.1E-07 73.7 27.9 189 201-491 7-198 (628)
478 3tjm_A Fatty acid synthase; th 97.9 2.4E-05 8.2E-10 82.5 8.4 69 713-793 49-123 (283)
479 2qe8_A Uncharacterized protein 97.9 0.0022 7.5E-08 69.4 24.3 180 313-525 92-306 (343)
480 2iwa_A Glutamine cyclotransfer 97.8 0.00097 3.3E-08 68.4 19.9 176 312-562 42-238 (266)
481 2qe8_A Uncharacterized protein 97.8 0.001 3.5E-08 72.1 21.2 68 190-261 68-137 (343)
482 2qc5_A Streptogramin B lactona 97.8 0.011 3.8E-07 61.9 28.6 193 190-490 21-218 (300)
483 3qqz_A Putative uncharacterize 97.8 0.0023 7.9E-08 65.2 21.7 210 180-490 20-253 (255)
484 4a0p_A LRP6, LRP-6, low-densit 97.8 0.0057 1.9E-07 71.7 27.5 220 164-491 16-238 (628)
485 2fp8_A Strictosidine synthase; 97.8 0.0049 1.7E-07 65.9 25.2 145 315-490 102-269 (322)
486 3tc9_A Hypothetical hydrolase; 97.7 0.0063 2.2E-07 68.0 24.9 136 164-375 160-301 (430)
487 2p4o_A Hypothetical protein; p 97.6 0.0041 1.4E-07 66.0 22.0 93 340-475 175-277 (306)
488 2fp8_A Strictosidine synthase; 97.6 0.0055 1.9E-07 65.5 22.8 128 334-491 82-217 (322)
489 2hih_A Lipase 46 kDa form; A1 97.5 0.00038 1.3E-08 76.9 11.2 37 759-795 151-213 (431)
490 2dsn_A Thermostable lipase; T1 97.5 0.00068 2.3E-08 73.7 12.6 38 758-795 103-165 (387)
491 3tc9_A Hypothetical hydrolase; 97.4 0.028 9.6E-07 62.7 25.7 158 190-440 138-299 (430)
492 3nol_A Glutamine cyclotransfer 97.2 0.0094 3.2E-07 60.4 16.8 194 192-488 46-254 (262)
493 1whs_A Serine carboxypeptidase 97.2 0.0029 1E-07 63.8 13.0 152 639-795 21-187 (255)
494 1xip_A Nucleoporin NUP159; bet 97.2 0.013 4.5E-07 63.7 19.3 83 312-416 144-231 (388)
495 3qqz_A Putative uncharacterize 97.1 0.089 3E-06 53.4 23.4 115 332-487 27-150 (255)
496 3nol_A Glutamine cyclotransfer 97.1 0.016 5.5E-07 58.6 17.0 167 312-528 63-243 (262)
497 2ism_A Putative oxidoreductase 97.0 0.03 1E-06 60.5 19.6 235 114-486 36-351 (352)
498 4ebb_A Dipeptidyl peptidase 2; 97.0 0.0038 1.3E-07 70.3 12.5 59 736-794 105-163 (472)
499 3mbr_X Glutamine cyclotransfer 96.9 0.051 1.7E-06 54.5 18.1 132 312-491 41-180 (243)
500 4hw6_A Hypothetical protein, I 96.8 0.11 3.8E-06 57.8 22.2 134 164-374 163-303 (433)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=8.9e-56 Score=541.89 Aligned_cols=630 Identities=14% Similarity=0.091 Sum_probs=444.2
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeee-ecCCC
Q 002209 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEI-QGFPD 187 (953)
Q Consensus 109 ~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l-~~~~~ 187 (953)
+....++|||||++|+.. + +.|++|++.+ ++.+.+ .....
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~----------------------------------~~i~~~~~~~----~~~~~~~~~~~~ 57 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-E----------------------------------NNILVFNAEY----GNSSVFLENSTF 57 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-T----------------------------------TEEEEEETTT----CCEEEEECTTTT
T ss_pred ccccccEECCCCcEEEEc-C----------------------------------CcEEEEECCC----CceEEEEechhh
Confidence 346689999999877664 3 2789999854 343443 22111
Q ss_pred CC-cccc--eEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecC
Q 002209 188 GA-KLNF--VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (953)
Q Consensus 188 ~~-~~~~--~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 264 (953)
.. .+.. +.|||||++|+|..........+...++|++|+++|+.++|+..+.. +..++|||||+.|+|+
T Consensus 58 ~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~-----~~~~~~SPdG~~la~~--- 129 (740)
T 4a5s_A 58 DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNN-----TQWVTWSPVGHKLAYV--- 129 (740)
T ss_dssp TTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTT-----EEEEEECSSTTCEEEE---
T ss_pred hhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCc-----ceeeEECCCCCEEEEE---
Confidence 11 2333 89999999999988643222334457899999999999888765542 6689999999999988
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCCCc---c------
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAV---Y------ 334 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~---~------ 334 (953)
...+||++++ +|+.++++..+. +
T Consensus 130 -----------------------------------------------~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~ 162 (740)
T 4a5s_A 130 -----------------------------------------------WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITD 162 (740)
T ss_dssp -----------------------------------------------ETTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred -----------------------------------------------ECCeEEEEECCCCceEEEcCCCCccceecCccc
Confidence 2247889998 888888875411 1
Q ss_pred -----------cccccCCCCcEEEEEEecCCcc--ccc------------------cC-C--CCCcceEEEeccC---c-
Q 002209 335 -----------TSLDPSPDEKYILISSIHRPYS--FIV------------------PC-G--RFPRQVGVWTTDG---I- 376 (953)
Q Consensus 335 -----------~~~~~SpDG~~l~~~~~~~~~~--~~~------------------~~-~--~~~~~i~~~d~~g---~- 376 (953)
..++|||||++|||.+.+...- +.. |. + .-...|++||+++ +
T Consensus 163 ~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~ 242 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVT 242 (740)
T ss_dssp HHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSS
T ss_pred ccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCC
Confidence 2478999999999998654310 000 00 0 1112689999988 6
Q ss_pred --eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC-------
Q 002209 377 --FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG------- 447 (953)
Q Consensus 377 --~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~------- 447 (953)
..+.+..... +.+....+..++|||||+.++++..+. +....|+++|+ ++++
T Consensus 243 ~~~~~~l~~~~~-------~~~~~~~~~~~~wspdg~~~~~~~~r~---------~~~~~i~~~d~---~tg~~~~~~~~ 303 (740)
T 4a5s_A 243 NATSIQITAPAS-------MLIGDHYLCDVTWATQERISLQWLRRI---------QNYSVMDICDY---DESSGRWNCLV 303 (740)
T ss_dssp CCCEEEECCCHH-------HHTSCEEEEEEEEEETTEEEEEEEESS---------TTEEEEEEEEE---ETTTTEEEECG
T ss_pred cceEEEecCCcc-------CCCCCeEEEEEEEeCCCeEEEEEeCCC---------CCEEEEEEEEC---CCCccccceeE
Confidence 4555543100 000112345789999999777774432 22346899996 4444
Q ss_pred ceEE-ee-ccccc-----CCeeeccCCceEE-EEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEecc
Q 002209 448 PEIL-HK-LDLRY-----GGISWCDDSLALV-YESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTS 519 (953)
Q Consensus 448 ~~~l-~~-~~~~~-----~~~~~SpDg~~l~-~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~Sp 519 (953)
...+ .. ....+ ..+.|||||+.|+ +.+.++ +..+||.++++++ ..+.++...... . -.+++
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~-G~~~l~~~~~~~~--~~~~lT~g~~~v-~-------~~~~~ 372 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE-GYRHICYFQIDKK--DCTFITKGTWEV-I-------GIEAL 372 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT-SCEEEEEEETTCS--SCEESCCSSSCE-E-------EEEEE
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC-CceEEEEEECCCC--ceEecccCCEEE-E-------EEEEE
Confidence 2333 22 22222 3789999999988 555444 4579999999885 567777554332 1 12446
Q ss_pred CCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceE-EEeccC-cccceeeeEeeccCCccccccccCCE
Q 002209 520 TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE-RIWESD-KEKYYETTVALMSDQTEGDLYLNQLK 597 (953)
Q Consensus 520 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~-~l~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~ 597 (953)
||+.|+|...... . .....+||.+++++++.+ +|+..- +. -.....++||+|++.
T Consensus 373 d~~~i~f~~~~~~------------~--~~~~~~ly~v~~~g~~~~~~lt~~~~~~---------~~~~~~~~~S~dg~~ 429 (740)
T 4a5s_A 373 TSDYLYYISNEYK------------G--MPGGRNLYKIQLIDYTKVTCLSCELNPE---------RCQYYSVSFSKEAKY 429 (740)
T ss_dssp CSSEEEEEESCGG------------G--CTTCBEEEEEETTEEEEEEESSTTTSTT---------TBCBEEEEECTTSSE
T ss_pred eCCEEEEEEecCC------------C--CCceeEEEEEECCCCCcceeeccccCCC---------CCceEEEEECCCCCE
Confidence 7888888874300 0 012458999999887765 666431 10 001123679999999
Q ss_pred EEEEEecCCCCceEEEEECCCCCeeEEecCCCCC----CCcCCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEE
Q 002209 598 ILTSKESKTENTQYYIQSWPDKKSCQITDFPHPY----PQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCL 673 (953)
Q Consensus 598 l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~~----~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~v 673 (953)
+++..+++. |+.+++++..+++..++...+..+ ........+.+++ ..+|.++++++++|+++++.+ ++|+|
T Consensus 430 ~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~--~~P~v 505 (740)
T 4a5s_A 430 YQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSK--KYPLL 505 (740)
T ss_dssp EEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTS--CEEEE
T ss_pred EEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCC--CccEE
Confidence 999999887 888999998888776766554322 2233344677777 779999999999999876554 59999
Q ss_pred EEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCcEEEEcCCCCCCCCCChhhh---hhhHHHHHHHHHHHHHH
Q 002209 674 FWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEE 749 (953)
Q Consensus 674 v~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~~~~~ 749 (953)
|++||++.... +. ..| ...+...++ ++||+|+.+|++|..+.|..+.. ..+....++|+.+++++
T Consensus 506 v~~HGg~~~~~-----~~---~~~---~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~ 574 (740)
T 4a5s_A 506 LDVYAGPCSQK-----AD---TVF---RLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQ 574 (740)
T ss_dssp EECCCCTTCCC-----CC---CCC---CCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHH
T ss_pred EEECCCCcccc-----cc---ccc---CcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHH
Confidence 99999864321 00 112 222344566 49999999888776666654332 23345678999999999
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccc-cch--hhhhHHHHHhcCccccc
Q 002209 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-DRT--LWEATSTYVEMSPFMSA 826 (953)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~-~~~--~~~~~~~~~~~sp~~~~ 826 (953)
|.+++.+|++||+|+||||||++|+.++.++|++|+++|+.+|+.++......+... .+. .+++.+.|...+|+..+
T Consensus 575 l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 654 (740)
T 4a5s_A 575 FSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRA 654 (740)
T ss_dssp HHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGG
T ss_pred HHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHH
Confidence 998888999999999999999999999999999999999999998865432211110 111 25667788899999999
Q ss_pred CCCCC-cEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccCCC
Q 002209 827 NKLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 827 ~~i~~-P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (953)
.+++. |+||+||+.|.+|| +.++.+++++|+..++++++++||+++|.+...+....+++.+.+||+++++...
T Consensus 655 ~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 729 (740)
T 4a5s_A 655 ENFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPA 729 (740)
T ss_dssp GGGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred hcCCCCcEEEEEcCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcCCCC
Confidence 99987 99999999999999 9999999999999999999999999999986667778899999999999997543
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=7.2e-54 Score=527.14 Aligned_cols=628 Identities=17% Similarity=0.213 Sum_probs=442.9
Q ss_pred chhHHHhhc-----CCCCCCceecCCCCEEEEEec-CCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccC
Q 002209 99 PPEIREIVD-----APPLPALSFSPQRDKILFLKR-RALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFP 172 (953)
Q Consensus 99 ~~~~~~~~~-----~~~~~~~~~SPDG~~la~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~ 172 (953)
+..+++++. ...+..++|||||++|+|.+. + +.... ..||+||+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d-----------------------~~~~~-----~~i~~~d~~~ 73 (741)
T 2ecf_A 22 KLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKD-----------------------SDRNQ-----LDLWSYDIGS 73 (741)
T ss_dssp CCCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECCS-----------------------SCTTE-----EEEEEEETTT
T ss_pred cccHHHHhccCCcCCCCCCCceEecCCCEEEEEeccC-----------------------CCCcc-----cEEEEEECCC
Confidence 345566663 345778999999999999987 3 11111 3789999854
Q ss_pred CCCCCceeeeecCCCC-----------------------CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCC
Q 002209 173 DGKLGQEIEIQGFPDG-----------------------AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG 229 (953)
Q Consensus 173 ~g~~~~~~~l~~~~~~-----------------------~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g 229 (953)
++.+++...... ..+..++|||||++|+|.. ...||++|++++
T Consensus 74 ----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~----------~~~i~~~d~~~~ 139 (741)
T 2ecf_A 74 ----GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL----------GGELYLYDLKQE 139 (741)
T ss_dssp ----CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEE----------TTEEEEEESSSC
T ss_pred ----CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEe----------CCcEEEEECCCC
Confidence 444444322111 1268899999999999976 269999999998
Q ss_pred ---ceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhh
Q 002209 230 ---KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDED 306 (953)
Q Consensus 230 ---~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 306 (953)
+.++++..... +..++|||||++|+|.
T Consensus 140 ~~~~~~~l~~~~~~-----~~~~~~SPDG~~la~~--------------------------------------------- 169 (741)
T 2ecf_A 140 GKAAVRQLTHGEGF-----ATDAKLSPKGGFVSFI--------------------------------------------- 169 (741)
T ss_dssp STTSCCBCCCSSSC-----EEEEEECTTSSEEEEE---------------------------------------------
T ss_pred CcceEEEcccCCcc-----cccccCCCCCCEEEEE---------------------------------------------
Confidence 77777765432 6689999999999987
Q ss_pred hhhhhccceEEEEEc-CCceeEeCCC-Cc-----------------ccccccCCCCcEEEEEEecCCccc----------
Q 002209 307 LFDYYATTQLVLVSL-DGTVKEIGPP-AV-----------------YTSLDPSPDEKYILISSIHRPYSF---------- 357 (953)
Q Consensus 307 ~~~~~~~~~l~~~~~-~g~~~~l~~~-~~-----------------~~~~~~SpDG~~l~~~~~~~~~~~---------- 357 (953)
...+|+++++ +|+.++++.. .. +..++|||||++|+|.+.+.....
T Consensus 170 -----~~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~ 244 (741)
T 2ecf_A 170 -----RGRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYAD 244 (741)
T ss_dssp -----ETTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSS
T ss_pred -----eCCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCC
Confidence 2237899999 8888877754 21 478999999999999986542100
Q ss_pred -------cccC---CCCCcceEEEeccC-ceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 358 -------IVPC---GRFPRQVGVWTTDG-IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 358 -------~~~~---~~~~~~i~~~d~~g-~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
..+. ......|++||+++ ++.+.+..... ....+..++| |||+.|++......
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~-pDg~~l~~~~~~~~----- 308 (741)
T 2ecf_A 245 RTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKE----------QDIYLARVNW-RDPQHLSFQRQSRD----- 308 (741)
T ss_dssp CEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSC----------SSEEEEEEEE-EETTEEEEEEEETT-----
T ss_pred cccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCC----------cceEEEEEEe-CCCCEEEEEEeccc-----
Confidence 0000 00112788999988 77666543210 1123457899 99999988733211
Q ss_pred cccccCCeEEEEecCCCCCCCceEEeeccc-----ccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDL-----RYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~-----~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 501 (953)
.....|+++|+ .+++.+.+..... .+..++|||||+ +++.+..++ ..+||.++.+++ ...++..
T Consensus 309 ---~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g-~~~l~~~~~~~~---~~~l~~~ 377 (741)
T 2ecf_A 309 ---QKKLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG-FQHLYRIDSKGK---AAALTHG 377 (741)
T ss_dssp ---SSEEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS-SCEEEEECSSSC---EEESCCS
T ss_pred ---CCeEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC-ccEEEEEcCCCC---eeeeeec
Confidence 22457999996 5566555543322 335799999999 555555443 358999997662 3444433
Q ss_pred CCccccCCCCCCCe-EeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeE
Q 002209 502 SSEDVYSDPGSPMM-RRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (953)
Q Consensus 502 ~~~~~~~~~~~p~~-~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~ 580 (953)
... +.. + .|||||++|++...... ....+||.++++++..++|+...+.
T Consensus 378 ~~~-v~~------~~~~s~dg~~l~~~~~~~~----------------~~~~~l~~~~~~g~~~~~l~~~~~~------- 427 (741)
T 2ecf_A 378 NWS-VDE------LLAVDEKAGLAYFRAGIES----------------ARESQIYAVPLQGGQPQRLSKAPGM------- 427 (741)
T ss_dssp SSC-EEE------EEEEETTTTEEEEEECSSC----------------TTCBEEEEEETTCCCCEECCCSCSE-------
T ss_pred ceE-EEe------EeEEeCCCCEEEEEEeCCC----------------CceEEEEEEEcCCCCeeecccCCCc-------
Confidence 221 111 3 59999999988873210 0133577777777767777763221
Q ss_pred eeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCC-----CCCCc--CCCceEEEEEEcCCC-cEE
Q 002209 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPH-----PYPQL--ASLQKELIKYQRKDG-VQL 652 (953)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~-----~~~~~--~~~~~~~~~~~~~dg-~~~ 652 (953)
...+|||||+.+++..++...|+++|+++..++..+.|+..+. .+... .....+.+++++.+| ..+
T Consensus 428 ------~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l 501 (741)
T 2ecf_A 428 ------HSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPL 501 (741)
T ss_dssp ------EEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEE
T ss_pred ------eEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEE
Confidence 1247899999999999999999999999987766666664332 22223 344688999999999 999
Q ss_pred EEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccc-hHHHHHHHcCcEEEEcCCCCCCCCCChhh
Q 002209 653 SATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGS-TSVLLWLARGFAILGGPTTPIIGEGDEEA 731 (953)
Q Consensus 653 ~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~la~~G~~V~~~~~~~~~G~G~~~~ 731 (953)
+++++.|+++++++ ++|+||++||++..... ...|..... ..+..|+++||+|+.+|+++..+.|..+.
T Consensus 502 ~~~~~~P~~~~~~~--~~p~vv~~hG~~~~~~~--------~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~ 571 (741)
T 2ecf_A 502 NYSVIKPAGFDPAK--RYPVAVYVYGGPASQTV--------TDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFG 571 (741)
T ss_dssp EEEEECCSSCCTTS--CEEEEEECCCSTTCCSC--------SSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHH
T ss_pred EEEEEeCCCCCCCC--CcCEEEEEcCCCCcccc--------cccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhh
Confidence 99999998765443 48999999997533110 011211000 35677889999999977765444333221
Q ss_pred h---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCccc-cc
Q 002209 732 N---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN-ED 807 (953)
Q Consensus 732 ~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~-~~ 807 (953)
. ..+....+.|+.+++++|.+++.+|.++++|+||||||++++.++.++|++|+++|+.+|+.++......+.. ..
T Consensus 572 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~ 651 (741)
T 2ecf_A 572 GALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTERYM 651 (741)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBHHHHHHHH
T ss_pred HHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhccccchhhc
Confidence 1 1223456899999999999988889999999999999999999999999999999999998775432111110 11
Q ss_pred chhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHH
Q 002209 808 RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVL 887 (953)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 887 (953)
..++...+.|...+|+..+.++++|+|++||++|.+|| ++++.+++++++..+++++++++|+++|.+.... ...+.
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~~~~ 728 (741)
T 2ecf_A 652 DLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVL--FTNSTSLMSALQKRGQPFELMTYPGAKHGLSGAD-ALHRY 728 (741)
T ss_dssp CCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHH-HHHHH
T ss_pred CCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCC--HHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCc-hhHHH
Confidence 23455667788889999999999999999999999999 9999999999999999999999999999985333 37788
Q ss_pred HHHHHHHHHhcc
Q 002209 888 WETDRWLQKYCV 899 (953)
Q Consensus 888 ~~i~~fl~~~l~ 899 (953)
+.+.+||+++|+
T Consensus 729 ~~i~~fl~~~l~ 740 (741)
T 2ecf_A 729 RVAEAFLGRCLK 740 (741)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 999999999985
No 3
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=4.4e-53 Score=518.76 Aligned_cols=630 Identities=12% Similarity=0.065 Sum_probs=420.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
....++|||||++++ ...+ +.|++||+.+ ++...+.......
T Consensus 18 ~~~~~~~spdg~~~~-~~~d---------------------------------g~i~~~d~~~----g~~~~~~~~~~~~ 59 (723)
T 1xfd_A 18 HDPEAKWISDTEFIY-REQK---------------------------------GTVRLWNVET----NTSTVLIEGKKIE 59 (723)
T ss_dssp CCCCCCBSSSSCBCC-CCSS---------------------------------SCEEEBCGGG----CCCEEEECTTTTT
T ss_pred cccccEEcCCCcEEE-EeCC---------------------------------CCEEEEECCC----CcEEEEecccccc
Confidence 467899999999553 3322 2679999854 3333333211111
Q ss_pred --cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCC
Q 002209 190 --KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (953)
Q Consensus 190 --~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 267 (953)
.+..++|||||++|+|..........+....||++|+++++.++++..... ...+..++|||||+.|+|.
T Consensus 60 ~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~~~~SPdG~~la~~------ 131 (723)
T 1xfd_A 60 SLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS--NAKLQYAGWGPKGQQLIFI------ 131 (723)
T ss_dssp TTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC--SCCCSBCCBCSSTTCEEEE------
T ss_pred ccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc--cccccccEECCCCCEEEEE------
Confidence 378899999999999987532122223347899999999988777654321 1115579999999999988
Q ss_pred CCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC--Ccc----------
Q 002209 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVY---------- 334 (953)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~--~~~---------- 334 (953)
...+|+++++ +|+.++++.. ..+
T Consensus 132 --------------------------------------------~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 132 --------------------------------------------FENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY 167 (723)
T ss_dssp --------------------------------------------ETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred --------------------------------------------ECCeEEEEECCCCceEEEecCCCCCceECcccceeE
Confidence 2246889998 7877777654 222
Q ss_pred --------cccccCCCCcEEEEEEecCCcc--ccc----------------c-CC--CCCcceEEEeccCceE-EEeccC
Q 002209 335 --------TSLDPSPDEKYILISSIHRPYS--FIV----------------P-CG--RFPRQVGVWTTDGIFV-RELCDL 384 (953)
Q Consensus 335 --------~~~~~SpDG~~l~~~~~~~~~~--~~~----------------~-~~--~~~~~i~~~d~~g~~~-~~l~~~ 384 (953)
..++|||||++|+|.+.+.... +.. + .+ .....|++||+++++. +.+...
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 5799999999999998653210 000 0 00 1123799999987663 555432
Q ss_pred CCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec--cccc----
Q 002209 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRY---- 458 (953)
Q Consensus 385 ~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~--~~~~---- 458 (953)
... ......+..++|||||+.++++.... .....|+++|+ .+++...+... ...+
T Consensus 248 ~~~-------~~~~~~~~~~~~SpDg~~l~~~~~~~---------~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~ 308 (723)
T 1xfd_A 248 DDP-------RMREYYITMVKWATSTKVAVTWLNRA---------QNVSILTLCDA---TTGVCTKKHEDESEAWLHRQN 308 (723)
T ss_dssp CCG-------GGSSEEEEEEEESSSSEEEEEEEETT---------SCEEEEEEEET---TTCCEEEEEEEECSSCCCCCC
T ss_pred ccC-------CCccceeEEEEEeCCCeEEEEEEcCC---------CCeEEEEEEeC---CCCcceEEEEeccCCEEeccC
Confidence 100 00112345789999999776663321 22457899996 55665554322 2222
Q ss_pred CCeeeccCCceEEEE-Eeccc---CceEEEEEc-CCCCCCC---cEEeecCCCccccCCCCCCCeEeccCCCEEEEEeee
Q 002209 459 GGISWCDDSLALVYE-SWYKT---RRTRTWVIS-PGSKDVA---PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (953)
Q Consensus 459 ~~~~~SpDg~~l~~~-~~~~~---~~~~l~~~d-~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~ 530 (953)
..+.|||||++|++. ...++ ...+||.++ ..++ . .+.++...... .. .+.|||||++|+|....
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~~l~~~~~~~-~~-----~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS--SNDNIQSITSGDWDV-TK-----ILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS--SSCCCCBSCCSSSCE-EE-----EEEEETTTTEEEEEESS
T ss_pred CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCC--CccceeEeecCCeEE-Ee-----eeEEcCCCCEEEEEEcC
Confidence 378999999999987 43332 145899999 4553 3 34444322111 10 15799999999988732
Q ss_pred ccCCCcEEEEecCCCCCCCCCCeEEEEECCCC-ceEEEecc--CcccceeeeEeeccCCccccccccCCEEEEEEecCCC
Q 002209 531 ENDEGTYILLNGNGATPEGNIPFLDLFDINTG-SKERIWES--DKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTE 607 (953)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~-~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 607 (953)
.. ....+||.++++++ +.++|+.. ... .....+|||||+.+++..+++..
T Consensus 381 ~~----------------~~~~~l~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~spdg~~l~~~~~~~~~ 433 (723)
T 1xfd_A 381 DL----------------PRRRQLYSANTVGNFNRQCLSCDLVENC-----------TYFSASFSHSMDFFLLKCEGPGV 433 (723)
T ss_dssp SC----------------TTCCEEEEECSSTTCCCBCSSTTSSSSC-----------CCCEEEECTTSSEEEEECCSSSS
T ss_pred CC----------------CcceEEEEEeCCCCCCcceecccccCCC-----------CeEEEEECCCCCEEEEEccCCCC
Confidence 10 02345777777665 44555532 110 01235799999999999999998
Q ss_pred CceEEEEECCCCCeeEEecCCCC----CCCcCCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcC
Q 002209 608 NTQYYIQSWPDKKSCQITDFPHP----YPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKS 683 (953)
Q Consensus 608 p~~l~~~~~~~g~~~~Lt~~~~~----~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~ 683 (953)
|..++. +..+++...+...+.. +........+.+++++.+| ++++++++|+++++.+ ++|+||++||++...
T Consensus 434 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~~~~--~~p~vv~~HG~~~~~ 509 (723)
T 1xfd_A 434 PMVTVH-NTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFTDTT--HYPLLLVVDGTPGSQ 509 (723)
T ss_dssp CCEEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCCSSS--CEEEEEECCCCTTCC
T ss_pred CeEEEE-ECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCCCCC--ccCEEEEEcCCCCcc
Confidence 876654 6555554333322211 1223334567888998899 9999999999875543 599999999986431
Q ss_pred cCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCc
Q 002209 684 KDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSK 760 (953)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 760 (953)
.. ...|. .......|+++||+|+.+|+++..++|..+.. ..+....+.|+.+++++|.+++.+|.+|
T Consensus 510 ~~--------~~~~~--~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~ 579 (723)
T 1xfd_A 510 SV--------AEKFE--VSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTR 579 (723)
T ss_dssp CC--------CCCCC--CSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEE
T ss_pred cc--------Ccccc--ccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhh
Confidence 10 01111 01223456678999999877665554433221 2233467899999999999888889999
Q ss_pred EEEEEeChHHHHHHHHHHhC----CCcccEEEEcccCCCCCCCCcCccc-ccchhhhhHHHHHhcCcccccCCCC-CcEE
Q 002209 761 IAVGGHSYGAFMTANLLAHA----PHLFCCGIARSGAYNRTLTPFGFQN-EDRTLWEATSTYVEMSPFMSANKLK-KPIL 834 (953)
Q Consensus 761 i~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~i~-~P~L 834 (953)
++|+||||||++++.++.++ |++|+++|+.+|+.++......+.. ....++...+.+...++...+.+++ +|+|
T Consensus 580 i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 659 (723)
T 1xfd_A 580 VAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFL 659 (723)
T ss_dssp EEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEE
T ss_pred EEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCCEE
Confidence 99999999999999999999 9999999999998876532211100 0011122223344556777888999 7999
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 835 LVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 835 i~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
|+||++|.+|| +.++.+++++++..+.+++++++|+++|.+...+....+++.+.+||.++|+
T Consensus 660 ii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 660 IIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred EEEeCCCCCcC--HhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 99999999999 9999999999999999999999999999986566678889999999998774
No 4
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=4.9e-51 Score=498.95 Aligned_cols=569 Identities=14% Similarity=0.103 Sum_probs=407.1
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..++|||| ++|+|.. ...||++|+++++.++++..... +..++|||||+.|+++
T Consensus 83 ~v~~~~~spd-~~~~~~~----------~~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~SpdG~~la~~-------- 138 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT----------QGGLVGFDMLARKVTYLFDTNEE-----TASLDFSPVGDRVAYV-------- 138 (706)
T ss_dssp CCEEEEETTT-TEEEEEE----------TTEEEEEETTTTEEEEEECCTTC-----CTTCEECTTSSEEEEE--------
T ss_pred CceeEEECCC-CeEEEEE----------CCEEEEEECCCCceEEccCCccc-----ccCCcCCCCCCEEEEE--------
Confidence 4788999999 8899865 36999999999988888765432 6689999999999987
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C-----CceeEeCCC-Cc---------
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-----GTVKEIGPP-AV--------- 333 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~-----g~~~~l~~~-~~--------- 333 (953)
...+|+++++ + |+.++++.. ..
T Consensus 139 ------------------------------------------~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 139 ------------------------------------------RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp ------------------------------------------ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred ------------------------------------------ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 2257889999 7 888777655 22
Q ss_pred ------ccccccCCCCcEEEEEEecCCcc-------------------cccc-CCCCCcceEEEeccCceEEEeccCCCc
Q 002209 334 ------YTSLDPSPDEKYILISSIHRPYS-------------------FIVP-CGRFPRQVGVWTTDGIFVRELCDLPLA 387 (953)
Q Consensus 334 ------~~~~~~SpDG~~l~~~~~~~~~~-------------------~~~~-~~~~~~~i~~~d~~g~~~~~l~~~~~~ 387 (953)
+..++|||||++|++.+.+.... +..+ .......|++||+++++.+.+......
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 47899999999999998432100 0000 011234799999998887666532111
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCC-CceEEeec-cc----ccCCe
Q 002209 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE-GPEILHKL-DL----RYGGI 461 (953)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~-~~~~l~~~-~~----~~~~~ 461 (953)
...+..++|||||+.|++...... .....|+++|+ .++ ..+.+... .. ....+
T Consensus 257 ----------~~~~~~~~~spdg~~l~~~~~~~~--------~~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 257 ----------EKFLTNLSWSPDENILYVAEVNRA--------QNECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp ----------TCEEEEEEECTTSSEEEEEEECTT--------SCEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSCC
T ss_pred ----------ceeEeeEEEECCCCEEEEEEeCCC--------CCeeEEEEEEC---CCCceeeEEEEccCCCeECccCCc
Confidence 123467999999998888622110 12347899996 444 44444322 11 12568
Q ss_pred eecc--CCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEE
Q 002209 462 SWCD--DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYIL 539 (953)
Q Consensus 462 ~~Sp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~ 539 (953)
.||| ||+.|+.+ ..+ +..+||.++.+++ ....++..... +.. .+.|||||++|++.....
T Consensus 316 ~~sp~~dg~~l~~~-~~~-g~~~l~~~~~~~~--~~~~l~~~~~~-v~~-----~~~~spdg~~l~~~~~~~-------- 377 (706)
T 2z3z_A 316 TFLPGSNNQFIWQS-RRD-GWNHLYLYDTTGR--LIRQVTKGEWE-VTN-----FAGFDPKGTRLYFESTEA-------- 377 (706)
T ss_dssp EECTTCSSEEEEEE-CTT-SSCEEEEEETTSC--EEEECCCSSSC-EEE-----EEEECTTSSEEEEEESSS--------
T ss_pred eeecCCCCEEEEEE-ccC-CccEEEEEECCCC--EEEecCCCCeE-EEe-----eeEEcCCCCEEEEEecCC--------
Confidence 9999 99965544 433 3358999997653 33444432211 110 057999999999887321
Q ss_pred EecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002209 540 LNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (953)
Q Consensus 540 ~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g 619 (953)
. ....+||.+|+++++.++|+..... ...+|||||+.+++..++...|.+++++++.++
T Consensus 378 ------~--~~~~~l~~~d~~~~~~~~l~~~~~~-------------~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 378 ------S--PLERHFYCIDIKGGKTKDLTPESGM-------------HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp ------C--TTCBEEEEEETTCCCCEESCCSSSE-------------EEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred ------C--CceEEEEEEEcCCCCceeccCCCce-------------EEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 0 0134699999999888877743321 124789999999999999999999999999888
Q ss_pred CeeEEecCCCCCCCcCCCceEEEEEEcCCC-cEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCC
Q 002209 620 KSCQITDFPHPYPQLASLQKELIKYQRKDG-VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFP 698 (953)
Q Consensus 620 ~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg-~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~ 698 (953)
+...++..+ ++..+.....+.++++..+| .+++++++.|+++++++ ++|+||++|||+..... . ..|.
T Consensus 437 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~--~~p~iv~~HGg~~~~~~-----~---~~~~ 505 (706)
T 2z3z_A 437 SHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAK--KYPVIVYVYGGPHAQLV-----T---KTWR 505 (706)
T ss_dssp EEEEEECC-------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTS--CEEEEEECCCCTTCCCC-----C---SCC-
T ss_pred eEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCC--CccEEEEecCCCCceee-----c---cccc
Confidence 755555432 34444555678899999999 89999999999876544 48999999998643210 0 1121
Q ss_pred CccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 002209 699 RIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (953)
Q Consensus 699 ~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 775 (953)
.....++..|+++||+|+++|++|..+.+..+.. ..+....++|+.+++++|.+++.+|.++++|+||||||++++.
T Consensus 506 ~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 585 (706)
T 2z3z_A 506 SSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTN 585 (706)
T ss_dssp ---CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred cCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHH
Confidence 1111246788899999999777655444433221 2344567899999999999888889999999999999999999
Q ss_pred HHHhCCCcccEEEEcccCCCCCCCCcCccc-ccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHH
Q 002209 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQN-EDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (953)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~ 854 (953)
++.++|++|+++|+.+|+.++......+.. ....++...+.|...+|...+.++++|+|++||++|.+|| +++++++
T Consensus 586 ~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~ 663 (706)
T 2z3z_A 586 LMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVV--WQHSLLF 663 (706)
T ss_dssp HHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSC--THHHHHH
T ss_pred HHHhCCCcEEEEEEcCCccchHHHHhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCC--HHHHHHH
Confidence 999999999999999998775432211110 1123345567788889999999999999999999999999 9999999
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
+++++..+++++++++|+++|.+... ....+++.+.+||+++|
T Consensus 664 ~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 664 LDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 99999988999999999999998644 67788999999999875
No 5
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-51 Score=502.67 Aligned_cols=603 Identities=15% Similarity=0.080 Sum_probs=411.2
Q ss_pred ceEEEEccCCCCCCceeeeecCCCC--CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce---eecccCC
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDG--AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA---RPLFQSP 238 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~--~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~---~~lt~~~ 238 (953)
+|++||+.+ ++.+++...... ..+..++|||||++|+|.......-..+....||++|+++|+. +++.
T Consensus 37 ~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--- 109 (719)
T 1z68_A 37 NIVLYNIET----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP--- 109 (719)
T ss_dssp CEEEEESSS----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---
T ss_pred CEEEEEcCC----CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---
Confidence 689999854 445555421100 0278999999999999987532111112357899999999988 6553
Q ss_pred CccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEE
Q 002209 239 DIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (953)
Q Consensus 239 ~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 318 (953)
.. +..++|||||+.|+|+ ...+|++
T Consensus 110 ~~-----~~~~~~SPDG~~la~~--------------------------------------------------~~~~i~~ 134 (719)
T 1z68_A 110 RP-----IQYLCWSPVGSKLAYV--------------------------------------------------YQNNIYL 134 (719)
T ss_dssp SS-----BCCEEECSSTTCEEEE--------------------------------------------------ETTEEEE
T ss_pred cc-----cccceECCCCCEEEEE--------------------------------------------------ECCeEEE
Confidence 21 5689999999999987 2247888
Q ss_pred EEc-CCceeEeCCCC--c------------------ccccccCCCCcEEEEEEecCCccc--------------------
Q 002209 319 VSL-DGTVKEIGPPA--V------------------YTSLDPSPDEKYILISSIHRPYSF-------------------- 357 (953)
Q Consensus 319 ~~~-~g~~~~l~~~~--~------------------~~~~~~SpDG~~l~~~~~~~~~~~-------------------- 357 (953)
+++ +|+.++++..+ . ...++|||||++|+|.+.+.....
T Consensus 135 ~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~y 214 (719)
T 1z68_A 135 KQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPY 214 (719)
T ss_dssp ESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEEC
T ss_pred EeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecC
Confidence 898 78777776431 1 147999999999999986532100
Q ss_pred ccc-CCCCCcceEEEeccCceEE---EeccCCCcccCCccccccccCccceeeccCCCCceEE-EEeccCCCcccccccC
Q 002209 358 IVP-CGRFPRQVGVWTTDGIFVR---ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYW-AETQDGGDAKVEVTPR 432 (953)
Q Consensus 358 ~~~-~~~~~~~i~~~d~~g~~~~---~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~-~~~~~~~~~~~~~~~~ 432 (953)
..+ ......+|++||++++... .+... ..+.+....+..++|||||+ +++. .++. ...
T Consensus 215 p~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~---------~~~ 277 (719)
T 1z68_A 215 PKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP-------AMIASSDYYFSWLTWVTDER-VCLQWLKRV---------QNV 277 (719)
T ss_dssp CBTTSCCCEEEEEEEESSCHHHHCCEECCCC-------HHHHTSCEEEEEEEESSSSE-EEEEEEESS---------TTE
T ss_pred CCCCCCCCeeEEEEEECCCCCccceeEccCC-------ccCCCCcceEEEeEEeCCCe-EEEEEeccc---------cCe
Confidence 000 0011237889999876542 22210 00001112346789999976 4444 2211 123
Q ss_pred CeEEEEe----cCCCCCCCceEEe-----ecccccC-----CeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 433 DIIYTQQ----AEPVQGEGPEILH-----KLDLRYG-----GISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 433 ~~l~~~d----~~~~~g~~~~~l~-----~~~~~~~-----~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
..|+++| + .+++.+.+. .....+. .+.|||||+.|++......+..+||.++++++ +.+.+
T Consensus 278 ~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~l 352 (719)
T 1z68_A 278 SVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQI 352 (719)
T ss_dssp EEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEEC
T ss_pred EEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEec
Confidence 4688998 5 444443333 2333344 78999999999886554445578999999875 45555
Q ss_pred ecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC--ceEEEeccCc-ccc
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG--SKERIWESDK-EKY 575 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~--~~~~l~~~~~-~~~ 575 (953)
+..... +.. +.++ ||++|+|...... . .....+||.++++++ +.++|+..-. ..
T Consensus 353 t~~~~~-v~~------~~~~-d~~~i~~~~~~~~------------~--~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~- 409 (719)
T 1z68_A 353 TSGKWE-AIN------IFRV-TQDSLFYSSNEFE------------E--YPGRRNIYRISIGSYPPSKKCVTCHLRKER- 409 (719)
T ss_dssp SCSSSC-EEE------EEEE-CSSEEEEEESCGG------------G--CTTCBEEEEEECSSSSCCEEESSTTTTTTT-
T ss_pred ccCceE-EEE------EEEE-eCCEEEEEEecCC------------C--CCceEEEEEEeCCCCCCCceeccCccCCCC-
Confidence 543221 111 4456 9999998874300 0 012346888888666 4566654210 00
Q ss_pred eeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCC----CCCcCCCceEEEEEEcCCCcE
Q 002209 576 YETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP----YPQLASLQKELIKYQRKDGVQ 651 (953)
Q Consensus 576 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~----~~~~~~~~~~~~~~~~~dg~~ 651 (953)
......+||+|++.+++..+++..| .++++++.+++..+++..+.. +........+.++++..+ .+
T Consensus 410 --------~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 479 (719)
T 1z68_A 410 --------CQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-IT 479 (719)
T ss_dssp --------BCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EE
T ss_pred --------CceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eE
Confidence 0001257899999999998888777 688899888887777765543 223344467889999877 99
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCcEEEEcCCCCCCCCCChh
Q 002209 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEE 730 (953)
Q Consensus 652 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~~~G~G~~~ 730 (953)
+++++++|+++++++ ++|+||++||++..... ...| ...+...++ ++||+|+.++++|..+.|..+
T Consensus 480 l~~~~~~P~~~~~~~--~~p~vl~~hG~~~~~~~--------~~~~---~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~ 546 (719)
T 1z68_A 480 LWYKMILPPQFDRSK--KYPLLIQVYGGPCSQSV--------RSVF---AVNWISYLASKEGMVIALVDGRGTAFQGDKL 546 (719)
T ss_dssp EEEEEEECTTCCSSS--CEEEEEEECCCTTBCCC--------CCCC---CCCHHHHHHHTTCCEEEEEECTTBSSSCHHH
T ss_pred EEEEEEeCCCCCCCC--CccEEEEECCCCCcCcc--------cccc---hhhHHHHHHhcCCeEEEEEcCCCCCCCchhh
Confidence 999999999865443 59999999998643210 0111 112344454 689999998776655544332
Q ss_pred hh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCccc-c
Q 002209 731 AN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN-E 806 (953)
Q Consensus 731 ~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~-~ 806 (953)
.. ..+....+.|+.+++++|.+++.+|+++++|+||||||++++.++.++|++|+++|+++|+.++......+.. .
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 626 (719)
T 1z68_A 547 LYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERF 626 (719)
T ss_dssp HGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHHH
T ss_pred HHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccchhh
Confidence 21 2234567899999999999988889999999999999999999999999999999999999876432211110 0
Q ss_pred cchh--hhhHHHHHhcCcccccCCCCC-cEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH
Q 002209 807 DRTL--WEATSTYVEMSPFMSANKLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESI 883 (953)
Q Consensus 807 ~~~~--~~~~~~~~~~sp~~~~~~i~~-P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 883 (953)
.+.+ ++..+.|...+|+..+.+++. |+||+||++|.+|| +.++.+++++|+..+++++++++|+++|.+ ..+..
T Consensus 627 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~ 703 (719)
T 1z68_A 627 MGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVH--FQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLST 703 (719)
T ss_dssp HCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHH
T ss_pred cCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcC--HHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccH
Confidence 0111 345567788889899999998 89999999999999 999999999999999999999999999998 45567
Q ss_pred HHHHHHHHHHHHHhcc
Q 002209 884 MHVLWETDRWLQKYCV 899 (953)
Q Consensus 884 ~~~~~~i~~fl~~~l~ 899 (953)
..+++.+.+||+++|+
T Consensus 704 ~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 704 NHLYTHMTHFLKQCFS 719 (719)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhC
Confidence 7889999999999873
No 6
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=2.7e-48 Score=470.98 Aligned_cols=575 Identities=16% Similarity=0.152 Sum_probs=414.3
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccccccc---------ceEEe--cCCeE
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFD---------NFVWV--NNSTL 257 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~---------~~~ws--pDg~~ 257 (953)
..+..|+||+ +.++|...+. ..++...||++ ..+|+.++|+..+.. +. .+.|+ |||+.
T Consensus 24 ~~~~~~~~s~--~~~~~~~~~~---~~~~~~~l~~~-~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 24 GRPACVGAVG--DEVWWVAPRP---AEAGRATLVRR-RADGAEESALPAPWN-----VRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp SCCEEEEEET--TEEEEEEEET---TTTTEEEEEEE-CTTSCEEESSCTTCC-----BCCCGGGTCCCCEEEECCSSSSC
T ss_pred CccceeEEcC--CeEEEEecCc---ccCCcEEEEEE-CCCCCcceeCCCCcc-----ccccccccCCccceeeeecCCCe
Confidence 4688899995 4788877532 23457789988 567888889876532 22 56677 99998
Q ss_pred -EEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcC----CceeEeCC--
Q 002209 258 -LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLD----GTVKEIGP-- 330 (953)
Q Consensus 258 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~----g~~~~l~~-- 330 (953)
|+|+.. ...+||+++++ |+.++++.
T Consensus 93 ~la~~~~------------------------------------------------~~~~l~~~~~~~~g~~~~~~l~~~~ 124 (662)
T 3azo_A 93 LLVFTHF------------------------------------------------GDQRLYAFEPDAPGGAVPRPLTPVS 124 (662)
T ss_dssp EEEEEBT------------------------------------------------TTCCEEEECTTSTTCCCCEECSCCC
T ss_pred EEEEEEC------------------------------------------------CCCeEEEEcCCCCCCCCCEeccCCc
Confidence 888711 12468999986 77888876
Q ss_pred ---C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC------ceEEEec-cCCCcccCCcccccccc
Q 002209 331 ---P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG------IFVRELC-DLPLAEDIPIAFNSVRK 399 (953)
Q Consensus 331 ---~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g------~~~~~l~-~~~~~~~~p~~~~~~~~ 399 (953)
. ..+..++|||||++|+|++.+.... .......+|++|++++ +..+.++ ... .
T Consensus 125 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-------------~ 188 (662)
T 3azo_A 125 AVGGGLRWADPVLLPERGEVWCMAEEFTGE---GPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH-------------R 188 (662)
T ss_dssp CSTTCEEEEEEEEETTTTEEEEEEEEECSS---STTCEEEEEEEEETTSTTTTCGGGSEESSCSCS-------------S
T ss_pred cCCCCccccCcEECCCCCEEEEEEecccCC---CCCCceeEEEEEECCCCccccCCceeEEEecCC-------------C
Confidence 3 4567899999999999998652100 0001124899999998 7777776 432 1
Q ss_pred CccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCC-CC---CceEEeec-ccccCCeeeccCCceEEEEE
Q 002209 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GE---GPEILHKL-DLRYGGISWCDDSLALVYES 474 (953)
Q Consensus 400 ~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-g~---~~~~l~~~-~~~~~~~~~SpDg~~l~~~~ 474 (953)
.+..++|||||+.|+|......+.. .....|+++++ + ++ +.+.++.. ...+..+.|||||+ |+|.+
T Consensus 189 ~~~~~~~SpDG~~la~~~~~~~~~~-----~~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~ 259 (662)
T 3azo_A 189 FVTGPRLSPDGRQAVWLAWDHPRMP-----WEGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVAT 259 (662)
T ss_dssp EECCCEECTTSSEEEEEEECTTCCT-----TTCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEE
T ss_pred cccCceECCCCCEEEEEECCCCCCC-----CCCcEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEE
Confidence 2346889999999998743221100 12357999997 4 34 55566554 46677899999999 77777
Q ss_pred ecccCceEEEEEcCCCCCCCcEEeecCCCccccC---CCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCC
Q 002209 475 WYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYS---DPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNI 551 (953)
Q Consensus 475 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (953)
+.++ ..+||.++++++ +.+.++...... .. .++...+.|+|||+.++... . ..
T Consensus 260 ~~~~-~~~l~~~~~~~~--~~~~l~~~~~~~-~~p~w~~~~~~~~~~~~~~~~~~~~-------------------~-~~ 315 (662)
T 3azo_A 260 DRTG-WWNLHRVDPATG--AATQLCRREEEF-AGPLWTPGMRWFAPLANGLIAVVHG-------------------K-GA 315 (662)
T ss_dssp CTTS-SCEEEEECTTTC--CEEESSCCSSBS-SCCCCSTTCCSEEECTTSCEEEEEB-------------------S-SS
T ss_pred CCCC-CeEEEEEECCCC--ceeecccccccc-cCccccccCceEeEeCCCEEEEEEE-------------------c-Cc
Confidence 6553 358999998764 445554432211 10 00001144555655433322 1 24
Q ss_pred CeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccc-cccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCC
Q 002209 552 PFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDL-YLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP 630 (953)
Q Consensus 552 ~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~ 630 (953)
.+||.+|+++++.++|+...+. +. .+ ++|++.+++...+...|..+|++++.+++.++|+..+..
T Consensus 316 ~~l~~~d~~~~~~~~l~~~~~~-----~~---------~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~ 381 (662)
T 3azo_A 316 AVLGILDPESGELVDAAGPWTE-----WA---------ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTD 381 (662)
T ss_dssp CEEEEEETTTTEEEECCSSCCE-----EE---------EEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCC
T ss_pred cEEEEEECCCCcEEEecCCCCe-----EE---------EEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcc
Confidence 5699999998988887655432 11 23 678899999999999999999999999999999876543
Q ss_pred C-CCcCCCceEEEEEEcCCCcEEEEEEEcCCCCC--CCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHH
Q 002209 631 Y-PQLASLQKELIKYQRKDGVQLSATLYLPPGYD--PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLL 707 (953)
Q Consensus 631 ~-~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~--~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (953)
. ........+.+++...+|..++++++.|++++ ....+++|+||++||++..... ..| ....+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~---------~~~----~~~~~~ 448 (662)
T 3azo_A 382 PVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP---------AVL----DLDVAY 448 (662)
T ss_dssp SSCGGGSCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCC---------CSC----CHHHHH
T ss_pred cCCccccCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCc---------ccc----hHHHHH
Confidence 2 23333457889999889999999999998754 0112358999999998633210 012 245677
Q ss_pred HHHcCcEEEEcCCCCCCCCCChhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcc
Q 002209 708 WLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (953)
Q Consensus 708 la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 784 (953)
|+++||+|+.+++++..|+|.++.. ..+....++|+.+++++|.+++.+|+++++|+||||||+++++++.+ |++|
T Consensus 449 l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~ 527 (662)
T 3azo_A 449 FTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVY 527 (662)
T ss_dssp HHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCC
T ss_pred HHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCce
Confidence 8999999999999888889988643 23445678999999999999988999999999999999999999887 8999
Q ss_pred cEEEEcccCCCCCCC------CcC--cc-cccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHH
Q 002209 785 CCGIARSGAYNRTLT------PFG--FQ-NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (953)
Q Consensus 785 ~a~v~~~~~~d~~~~------~~~--~~-~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~ 855 (953)
+++|+.+|+.++... .+. +. ...+...+..+.|...+|+.++.++++|+||+||++|.+|| +.++++++
T Consensus 528 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~ 605 (662)
T 3azo_A 528 ACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQCDRFL 605 (662)
T ss_dssp SEEEEESCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--THHHHHHH
T ss_pred EEEEecCCccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCC--HHHHHHHH
Confidence 999999998763211 000 00 00111124567788899999999999999999999999999 99999999
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccCC
Q 002209 856 NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 856 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
++|+..+++++++++|+++|.+...++...+++.+.+||.++++..
T Consensus 606 ~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 606 EAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp HHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998766677889999999999999654
No 7
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=1.1e-48 Score=466.36 Aligned_cols=538 Identities=16% Similarity=0.141 Sum_probs=395.7
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+...+|||||++|||.+.. ++..+||.+ ++|+.++++...... +..++|||| +.++.. ....+
T Consensus 23 ~~~~~~~~~DG~~la~~s~~------~g~~~lw~~--~~g~~~~lt~~~~~~----~~~~~~spd-~~l~~~-~~~~g-- 86 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFS------EGSVNAYLY--DGGETVKLNREPINS----VLDPHYGVG-RVILVR-DVSKG-- 86 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEE------TTEEEEEEE--ETTEEEECCSSCCSE----ECEECTTCS-EEEEEE-ECSTT--
T ss_pred chheeecCCCCCeEEEEEcc------CCceeEEEE--cCCCcEeeecccccc----cccccCCCC-eEEEEe-ccCCC--
Confidence 47788999999999998752 356788886 588999998766322 668999999 555433 11000
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc--CCceeEeCCCCcccccccCCCCcEEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIGPPAVYTSLDPSPDEKYIL 347 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~--~g~~~~l~~~~~~~~~~~SpDG~~l~ 347 (953)
+ ...+||.+++ +|....++........+|||||+.++
T Consensus 87 ----------------------------------~-------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 87 ----------------------------------A-------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVV 125 (582)
T ss_dssp ----------------------------------S-------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEE
T ss_pred ----------------------------------C-------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEE
Confidence 0 2247889998 77766776654455679999999998
Q ss_pred EEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccc
Q 002209 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (953)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~ 427 (953)
|++... ..+.+||+++++.++++..+. .+++|||||+.|++.....
T Consensus 126 ~~s~~~------------~~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~la~~~~~~------- 171 (582)
T 3o4h_A 126 FTGATE------------DRVALYALDGGGLRELARLPG---------------FGFVSDIRGDLIAGLGFFG------- 171 (582)
T ss_dssp EEEECS------------SCEEEEEEETTEEEEEEEESS---------------CEEEEEEETTEEEEEEEEE-------
T ss_pred EEecCC------------CCceEEEccCCcEEEeecCCC---------------ceEEECCCCCEEEEEEEcC-------
Confidence 887432 256699999988888876431 4788999999999873322
Q ss_pred ccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCcccc
Q 002209 428 EVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVY 507 (953)
Q Consensus 428 ~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 507 (953)
.....||++|+ ++++.+.++.....+..++|||||+.|+ .+..+ +..+||++|++++ +.+ ++......+.
T Consensus 172 --~~~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~-~~~~i~~~d~~~~--~~~-~~~~~~~~~~ 241 (582)
T 3o4h_A 172 --GGRVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTA-GLETA-REARLVTVDPRDG--SVE-DLELPSKDFS 241 (582)
T ss_dssp --TTEEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEE-EEECS-SCEEEEEECTTTC--CEE-ECCCSCSHHH
T ss_pred --CCCeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEE-EccCC-CeeEEEEEcCCCC--cEE-EccCCCcChh
Confidence 12246999996 6778888887777778899999999999 33333 3358999999986 334 3332222222
Q ss_pred CCCCCCCeE--------eccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeee
Q 002209 508 SDPGSPMMR--------RTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (953)
Q Consensus 508 ~~~~~p~~~--------~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~ 579 (953)
. +. ||||| .+++..... ..+.+|++ |+..+. ..+. +
T Consensus 242 ~------~~~~~~~~~~~spdg-~~~~~~~~~--------------------g~~~l~~~--g~~~~~--~~~~-----v 285 (582)
T 3o4h_A 242 S------YRPTAITWLGYLPDG-RLAVVARRE--------------------GRSAVFID--GERVEA--PQGN-----H 285 (582)
T ss_dssp H------HCCSEEEEEEECTTS-CEEEEEEET--------------------TEEEEEET--TEEECC--CSSE-----E
T ss_pred h------hhhccccceeEcCCC-cEEEEEEcC--------------------CcEEEEEE--CCeecc--CCCc-----e
Confidence 1 44 99999 666655321 13667777 544331 1111 1
Q ss_pred EeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCCCCC---cCCCceEEEEEEcCCCcEEEEEE
Q 002209 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQ---LASLQKELIKYQRKDGVQLSATL 656 (953)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~---~~~~~~~~~~~~~~dg~~~~~~l 656 (953)
. ..+|| ||+ +++..++...|+++|+++..+ +.++| .+.. ......+.+++++.+|.++++++
T Consensus 286 ~-------~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~-~~~~l-----~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 350 (582)
T 3o4h_A 286 G-------RVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE-PLLEG-----GLPEDLRRSIAGSRLVWVESFDGSRVPTYV 350 (582)
T ss_dssp E-------EEEEE-TTE-EEEEEEETTEEEEEEEETTCC-EEECC-----CCCHHHHHTEEEEEEEEEECTTSCEEEEEE
T ss_pred E-------EEEec-CCE-EEEEEcCCCCCCeEEEEcCCC-ceEEE-----ecCCccccccCcceEEEEECCCCCEEEEEE
Confidence 1 24677 664 567788888899999998755 54444 2222 44456789999999999999999
Q ss_pred EcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---h
Q 002209 657 YLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---D 733 (953)
Q Consensus 657 ~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~ 733 (953)
+.|+++.+ +.|+||++||+++... ...| ...+..|+++||+|+.+++++..|+|.++.. .
T Consensus 351 ~~p~~~~~----~~p~vv~~HG~~~~~~---------~~~~----~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~ 413 (582)
T 3o4h_A 351 LESGRAPT----PGPTVVLVHGGPFAED---------SDSW----DTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG 413 (582)
T ss_dssp EEETTSCS----SEEEEEEECSSSSCCC---------CSSC----CHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTT
T ss_pred EcCCCCCC----CCcEEEEECCCccccc---------cccc----CHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhh
Confidence 99987532 5899999999764321 0112 2456788999999999999888788887543 3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcc-----cccc
Q 002209 734 RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQ-----NEDR 808 (953)
Q Consensus 734 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~-----~~~~ 808 (953)
.+....++|+.++++++.+++.+| +++|+||||||++++.++.++|++|+++|+.+|+.++........ ....
T Consensus 414 ~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (582)
T 3o4h_A 414 DPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQ 491 (582)
T ss_dssp CTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHH
Confidence 445677899999999999998777 999999999999999999999999999999999876421100000 0000
Q ss_pred hhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHH
Q 002209 809 TLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (953)
Q Consensus 809 ~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 888 (953)
......+.+...+|+.++.++++|+|++||++|.+|| +.++++++++++..+++++++++|+++|.+...+....+++
T Consensus 492 ~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~ 569 (582)
T 3o4h_A 492 LTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTP--LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILL 569 (582)
T ss_dssp HTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHH
T ss_pred HcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcC--HHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHH
Confidence 1114567788899999999999999999999999999 99999999999999999999999999999876677788999
Q ss_pred HHHHHHHHhccC
Q 002209 889 ETDRWLQKYCVS 900 (953)
Q Consensus 889 ~i~~fl~~~l~~ 900 (953)
.+.+||+++|+.
T Consensus 570 ~i~~fl~~~l~~ 581 (582)
T 3o4h_A 570 PAVFFLATQRER 581 (582)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 999999999863
No 8
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=5e-47 Score=462.39 Aligned_cols=584 Identities=12% Similarity=0.095 Sum_probs=405.3
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCc--cccccccceEEecCCeEEEEEecCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
+..| +|||++++|..... +.....||+++..+++.+.|+..... ..+..+..++|||||++|+|+....+.
T Consensus 76 ~~~p--~~dG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~- 148 (710)
T 2xdw_A 76 YSCH--FKKGKRYFYFYNTG----LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS- 148 (710)
T ss_dssp ECCC--EEETTEEEEEEECS----SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC-
T ss_pred CCCC--EEECCEEEEEEEcC----CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC-
Confidence 4445 49999999988632 33356899999888877655432210 001125689999999999998321100
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCCCcEE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l 346 (953)
...+|+++|+ +|+...++.. ..+..++|||||+.|
T Consensus 149 -------------------------------------------~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l 185 (710)
T 2xdw_A 149 -------------------------------------------DWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGM 185 (710)
T ss_dssp -------------------------------------------SCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEE
T ss_pred -------------------------------------------ceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEE
Confidence 1237999999 8877665433 346789999999999
Q ss_pred EEEEecCCcc---ccccCCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002209 347 LISSIHRPYS---FIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 347 ~~~~~~~~~~---~~~~~~~~~~~i~~~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~ 421 (953)
+|++.+.+.. ..........+|++|++.++.. +.+...+.. ......+.|||||+.|++......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~----------~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----------PKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC----------CeEEEEEEEcCCCCEEEEEEEccC
Confidence 9998654310 0001112345799999986542 222222110 012246899999999988743211
Q ss_pred CCCcccccccCCeEEEEecCCCCC------C--CceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCC
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQG------E--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g------~--~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (953)
+....||++++ ++ + ..+.++...... ...|+|||+.|++..+.+..+.+|+.++++++..
T Consensus 256 --------~~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 256 --------DPVNRLWYCDL---QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp --------SSCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred --------CCccEEEEEEC---cccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 11468999997 32 3 456666544333 2469999999999987665456899999987521
Q ss_pred -CcEEeecCCCc-cccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCc-eEEEecc
Q 002209 494 -APRILFDRSSE-DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS-KERIWES 570 (953)
Q Consensus 494 -~~~~~~~~~~~-~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~-~~~l~~~ 570 (953)
..+.++..... .+.+ +.|++++ ++++..... ...+|+++|+.+|+ .+.|...
T Consensus 324 ~~~~~l~~~~~~~~~~~------~~~~~~~-~lv~~~~~~------------------g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 324 SKWKVLVPEHEKDVLEW------VACVRSN-FLVLCYLHD------------------VKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp GGCEEEECCCSSCEEEE------EEEETTT-EEEEEEEET------------------TEEEEEEEETTTCCEEEEECCC
T ss_pred ccceeccCCCCCCeEEE------EEEEcCC-EEEEEEEEC------------------CEEEEEEEECCCCCEEEecCCC
Confidence 12444433221 1211 5677544 455544321 23469999996665 4555443
Q ss_pred CcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCC--eeEEecCCCCCCCcCCCceEEEEEEcCC
Q 002209 571 DKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK--SCQITDFPHPYPQLASLQKELIKYQRKD 648 (953)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~--~~~Lt~~~~~~~~~~~~~~~~~~~~~~d 648 (953)
.+. +. ..++++|++.+++..++..+|..+|++++.+++ .+.+............+..+.+++++.|
T Consensus 379 ~~~-----v~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d 446 (710)
T 2xdw_A 379 VGS-----VV-------GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKD 446 (710)
T ss_dssp SSE-----EE-------EEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTT
T ss_pred Cce-----EE-------EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCC
Confidence 221 11 135678999999999999999999999999888 6777654322122345678999999999
Q ss_pred CcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCCCC
Q 002209 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEG 727 (953)
Q Consensus 649 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G 727 (953)
|.+|+++++.|+++... ++.|+||++|||+.....+ .| . .....|++ +||+|+.++++|..++|
T Consensus 447 g~~i~~~~~~p~~~~~~--~~~P~vl~~hGg~~~~~~~---------~~---~-~~~~~l~~~~G~~v~~~d~rG~g~~g 511 (710)
T 2xdw_A 447 GTKIPMFIVHKKGIKLD--GSHPAFLYGYGGFNISITP---------NY---S-VSRLIFVRHMGGVLAVANIRGGGEYG 511 (710)
T ss_dssp SCEEEEEEEEETTCCCS--SCSCEEEECCCCTTCCCCC---------CC---C-HHHHHHHHHHCCEEEEECCTTSSTTH
T ss_pred CCEEEEEEEecCCCCCC--CCccEEEEEcCCCCCcCCC---------cc---c-HHHHHHHHhCCcEEEEEccCCCCCCC
Confidence 99999999999876433 3589999999986432210 11 1 22446778 99999998888777666
Q ss_pred Chhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcC--
Q 002209 728 DEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-- 802 (953)
Q Consensus 728 ~~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~-- 802 (953)
..+.. .......+.|+++++++|++++++|++||+|+|+||||++++.++.++|++|+++|+.+|+.++......
T Consensus 512 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~ 591 (710)
T 2xdw_A 512 ETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTI 591 (710)
T ss_dssp HHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT
T ss_pred hHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCC
Confidence 65432 2344567899999999999998899999999999999999999999999999999999999885432110
Q ss_pred ---cccccch--hhhhHHHHHhcCcccccC-----CCCC-cEEEEEeCCCCCCCCchHHHHHHHHHHHhC-------CCc
Q 002209 803 ---FQNEDRT--LWEATSTYVEMSPFMSAN-----KLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGH-------GAL 864 (953)
Q Consensus 803 ---~~~~~~~--~~~~~~~~~~~sp~~~~~-----~i~~-P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~-------g~~ 864 (953)
+....+. ..+..+.+..++|+.++. +++. |+||+||++|.+|| +.++.+++++|+.. +.+
T Consensus 592 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~ 669 (710)
T 2xdw_A 592 GHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQYIVGRSRKQNNP 669 (710)
T ss_dssp GGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHHHTTTSTTCCSC
T ss_pred ChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccC--hhHHHHHHHHHHhhhccccCCCcC
Confidence 0000011 122344566789999998 7886 99999999999999 99999999999987 899
Q ss_pred EEEEEeCCCCccCCCc-ccHHHHHHHHHHHHHHhccC
Q 002209 865 CRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 865 ~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l~~ 900 (953)
+++++++++||++... .........+++||.++++.
T Consensus 670 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 670 LLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp EEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999998643 23467888999999999864
No 9
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=1.1e-46 Score=458.05 Aligned_cols=580 Identities=14% Similarity=0.095 Sum_probs=403.6
Q ss_pred eEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCc--cccccccceEEecCCeEEEEEecCCCCCCCC
Q 002209 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (953)
Q Consensus 194 ~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 271 (953)
+..+|||++|+|..... +.....||+++..+++.+.|+..... .....+..++|||||++|+|+....+.
T Consensus 73 ~~p~~dG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~---- 144 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHK----DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA---- 144 (695)
T ss_dssp CCCEEETTEEEEEEECT----TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC----
T ss_pred CCCEEECCEEEEEEEcC----CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC----
Confidence 34459999999988633 33467899999988888888753320 011126689999999999998321110
Q ss_pred CCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee---EeCCCCcccccccCCCCcEEE
Q 002209 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK---EIGPPAVYTSLDPSPDEKYIL 347 (953)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~---~l~~~~~~~~~~~SpDG~~l~ 347 (953)
....|+++|+ +|+.. .+.. .....++|||||+.|+
T Consensus 145 ----------------------------------------~~~~i~v~dl~tg~~~~~~~~~~-~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 145 ----------------------------------------DEAVLHVIDVDSGEWSKVDVIEG-GKYATPKWTPDSKGFY 183 (695)
T ss_dssp ----------------------------------------SCCEEEEEETTTCCBCSSCCBSC-CTTCCCEECTTSSEEE
T ss_pred ----------------------------------------ceEEEEEEECCCCCCcCCcccCc-ccccceEEecCCCEEE
Confidence 1257999999 77654 1211 2237899999999999
Q ss_pred EEEecCCccccccCCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
|++.+.+............+|++|++.++.. +.+...+.. ......+.|||||+.|++.....
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~----- 248 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD----------PTTFLQSDLSRDGKYLFVYILRG----- 248 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC----------TTCEEEEEECTTSCCEEEEEEET-----
T ss_pred EEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC----------CEEEEEEEECCCCCEEEEEEeCC-----
Confidence 9986542100000011234799999986542 333332111 01234689999999998873221
Q ss_pred ccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCC-CcEEeecCC-C
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV-APRILFDRS-S 503 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~~~~-~ 503 (953)
.....||+++. .+++.+.|+........+.| +||+ |++.++.+..+.+|+.++++++.. ..+.++... .
T Consensus 249 ----~~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 319 (695)
T 2bkl_A 249 ----WSENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS 319 (695)
T ss_dssp ----TTEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS
T ss_pred ----CCceEEEEEcC---CCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC
Confidence 02447888874 45677777766555555666 7888 888776554456899999987521 124444322 1
Q ss_pred ccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeec
Q 002209 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALM 583 (953)
Q Consensus 504 ~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 583 (953)
..+.. ++|+ +..+++..... ...+|++++++++..+.+...... ..
T Consensus 320 ~~l~~------~~~~--~~~lv~~~~~d------------------g~~~l~~~~~~g~~~~~l~~~~~~-----~v--- 365 (695)
T 2bkl_A 320 ASLLS------VSIV--GGHLSLEYLKD------------------ATSEVRVATLKGKPVRTVQLPGVG-----AA--- 365 (695)
T ss_dssp CEEEE------EEEE--TTEEEEEEEET------------------TEEEEEEEETTCCEEEECCCSSSS-----EE---
T ss_pred CeEEE------EEEE--CCEEEEEEEEC------------------CEEEEEEEeCCCCeeEEecCCCCe-----EE---
Confidence 11111 4455 34455444221 234689999876655555432211 01
Q ss_pred cCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEcCCCCC
Q 002209 584 SDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYD 663 (953)
Q Consensus 584 ~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~ 663 (953)
...++++|++.+++..++..+|..+|++++.+++.+.|+..+.. .....+..+.+++++.||.+|+++++.|++++
T Consensus 366 ---~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~ 441 (695)
T 2bkl_A 366 ---SNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDLK 441 (695)
T ss_dssp ---CCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTCC
T ss_pred ---EEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCCC
Confidence 12467889999999999999999999999999998888865433 22344678999999999999999999998764
Q ss_pred CCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---hhhHHHHH
Q 002209 664 PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLV 740 (953)
Q Consensus 664 ~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~ 740 (953)
.. ++.|+||++|||+...... .|. .....|+++||+|+.++++|..++|..+.. .......+
T Consensus 442 ~~--~~~p~vl~~hGg~~~~~~~---------~~~----~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~ 506 (695)
T 2bkl_A 442 RD--GNAPTLLYGYGGFNVNMEA---------NFR----SSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVF 506 (695)
T ss_dssp CS--SCCCEEEECCCCTTCCCCC---------CCC----GGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHH
T ss_pred CC--CCccEEEEECCCCccccCC---------CcC----HHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcH
Confidence 43 3599999999986443211 121 123468899999999999887778776432 23456778
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCc-C----cccccchh--hhh
Q 002209 741 ACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF-G----FQNEDRTL--WEA 813 (953)
Q Consensus 741 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~-~----~~~~~~~~--~~~ 813 (953)
+|+++++++|++++++|++||+|+|+||||++++.++.++|++|+++|+.+|+.++..... . +....+.+ .+.
T Consensus 507 ~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~ 586 (695)
T 2bkl_A 507 DDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPED 586 (695)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHH
T ss_pred HHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999988543211 0 00000111 122
Q ss_pred HHHHHhcCcccccCCCC--CcEEEEEeCCCCCCCCchHHHHHHHHHHHh---CCCcEEEEEeCCCCccCCC-cccHHHHH
Q 002209 814 TSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQSDRFFNALKG---HGALCRLVILPFESHGYAA-RESIMHVL 887 (953)
Q Consensus 814 ~~~~~~~sp~~~~~~i~--~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~-~~~~~~~~ 887 (953)
.+.+..++|+.++.+++ +|+||+||++|.+|| +.++.+++++|+. .+.++++++++++||++.. .+......
T Consensus 587 ~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 664 (695)
T 2bkl_A 587 FKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVD--PMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESS 664 (695)
T ss_dssp HHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSC--THHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHH
T ss_pred HHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHH
Confidence 34566789999998876 699999999999999 9999999999998 6789999999999999753 34456778
Q ss_pred HHHHHHHHHhccCC
Q 002209 888 WETDRWLQKYCVSN 901 (953)
Q Consensus 888 ~~i~~fl~~~l~~~ 901 (953)
..+++||.++|+..
T Consensus 665 ~~~~~fl~~~l~~~ 678 (695)
T 2bkl_A 665 VDLYSFLFQVLDVQ 678 (695)
T ss_dssp HHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHcCCC
Confidence 88999999998643
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=6e-46 Score=450.05 Aligned_cols=578 Identities=13% Similarity=0.088 Sum_probs=401.2
Q ss_pred EeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCC--ccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002209 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD--IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (953)
Q Consensus 195 ~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~--~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 272 (953)
..+++|.+++|..... ......+|+.+.++++.. |..... ......+..++|||||++|+|+....+.
T Consensus 83 ~p~~~g~~~y~~~~~~----~~~~~~~~r~~~~~~~~v-llD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~----- 152 (693)
T 3iuj_A 83 APFREGRYHYFFKNDG----LQNQNVLWRQQEGKPAEV-FLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGS----- 152 (693)
T ss_dssp CCEEETTEEEEEEECS----SCSSCEEEEECTTSCCEE-EECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSC-----
T ss_pred CCEEECCEEEEEEEcC----CCceeEEEEeCCCCCcEE-EEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCC-----
Confidence 3357899999877522 334457777665554432 322111 0011135678999999999998321110
Q ss_pred CCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCCCc-ccccccCCCCcEEEEEE
Q 002209 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAV-YTSLDPSPDEKYILISS 350 (953)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~-~~~~~~SpDG~~l~~~~ 350 (953)
....|+++|+ +|+......... ..+++|| ||+.|+|++
T Consensus 153 ---------------------------------------~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~ 192 (693)
T 3iuj_A 153 ---------------------------------------DWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSS 192 (693)
T ss_dssp ---------------------------------------CEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEE
T ss_pred ---------------------------------------ceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEE
Confidence 2257999999 887655533322 5789999 999999999
Q ss_pred ecCCccccccCCCCCcceEEEeccCce--EEEeccCCC-cccCCccccccccCccceeeccCCCCceEEEEeccCCCccc
Q 002209 351 IHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPL-AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (953)
Q Consensus 351 ~~~~~~~~~~~~~~~~~i~~~d~~g~~--~~~l~~~~~-~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~ 427 (953)
.+.+..........+.+|++|++.+.. .+.+...+. .. ....++.|||||+.|++.....
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~----------~~~~~~~~SpDg~~l~~~~~~~------- 255 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH----------HRYVGATVTEDDRFLLISAANS------- 255 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC----------CSEEEEEECTTSCEEEEEEESS-------
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC----------eEEEEEEEcCCCCEEEEEEccC-------
Confidence 764311111111234589999987543 234443321 10 1224688999999988873221
Q ss_pred ccccCCeEEEEecCCCCCC--CceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCC-CcEEeecCCCc
Q 002209 428 EVTPRDIIYTQQAEPVQGE--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV-APRILFDRSSE 504 (953)
Q Consensus 428 ~~~~~~~l~~~d~~~~~g~--~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~ 504 (953)
.....+|++++ +++ +.+.++........+ |++||++|+|..+.+..+.+|+.++++++.. ..+.++.....
T Consensus 256 --~~~~~i~~~d~---~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 256 --TSGNRLYVKDL---SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp --SSCCEEEEEET---TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred --CCCcEEEEEEC---CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC
Confidence 12358999996 333 566676554433333 8999999999988765557999999988632 12344432221
Q ss_pred cccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeecc
Q 002209 505 DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMS 584 (953)
Q Consensus 505 ~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 584 (953)
. +.|+++|++|++..... ....|+++|++++..+.|...... .+.
T Consensus 330 ~---------~~~s~~g~~lv~~~~~~------------------g~~~l~~~d~~g~~~~~l~~p~~~----~~~---- 374 (693)
T 3iuj_A 330 V---------LTVHSGSGYLFAEYMVD------------------ATARVEQFDYEGKRVREVALPGLG----SVS---- 374 (693)
T ss_dssp C---------EEEEEETTEEEEEEEET------------------TEEEEEEECTTSCEEEEECCSSSS----EEE----
T ss_pred E---------EEEEEECCEEEEEEEEC------------------CeeEEEEEECCCCeeEEeecCCCc----eEE----
Confidence 1 36999999999887532 234699999998777766543321 011
Q ss_pred CCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEcCCCCCC
Q 002209 585 DQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDP 664 (953)
Q Consensus 585 ~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~ 664 (953)
..++++|++.+++..++..+|..+|.+++.+++.+.|+..+..+ ....+..+.+++++.||.+|++++++|+++..
T Consensus 375 ---~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~ 450 (693)
T 3iuj_A 375 ---GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAPF-KPEDYVSEQRFYQSKDGTRVPLIISYRKGLKL 450 (693)
T ss_dssp ---ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSSC-CGGGEEEEEEEEECTTSCEEEEEEEEESSCCC
T ss_pred ---eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCCc-ChhhCeeEEEEEecCCCcEEEEEEEecCCCCC
Confidence 13567899999999999999999999999999988888765433 23446789999999999999999999987644
Q ss_pred CCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---hhhHHHHHH
Q 002209 665 SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVA 741 (953)
Q Consensus 665 ~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~ 741 (953)
. ++.|+||++|||+..... ..| ......|+++||+|+.++++|..++|..+.. .......++
T Consensus 451 ~--~~~P~ll~~hGg~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~ 515 (693)
T 3iuj_A 451 D--GSNPTILYGYGGFDVSLT---------PSF----SVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFD 515 (693)
T ss_dssp S--SCCCEEEECCCCTTCCCC---------CCC----CHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred C--CCccEEEEECCCCCcCCC---------Ccc----CHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHH
Confidence 3 359999999998643211 112 1335678999999999999888888876543 234556789
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcC-----cccccchhh--hh-
Q 002209 742 CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-----FQNEDRTLW--EA- 813 (953)
Q Consensus 742 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~-----~~~~~~~~~--~~- 813 (953)
|+++++++|.+++.+|++||+|+|+|+||++++.++.++|++|+|+|+.+|++|+...... +..+.+.+. +.
T Consensus 516 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 595 (693)
T 3iuj_A 516 DFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAM 595 (693)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHH
T ss_pred HHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHHH
Confidence 9999999999999999999999999999999999999999999999999999886432110 000011111 11
Q ss_pred HHHHHhcCcccccCC-CCCc-EEEEEeCCCCCCCCchHHHHHHHHHHHhC---CCcEEEEEeCCCCccCCCc-ccHHHHH
Q 002209 814 TSTYVEMSPFMSANK-LKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGH---GALCRLVILPFESHGYAAR-ESIMHVL 887 (953)
Q Consensus 814 ~~~~~~~sp~~~~~~-i~~P-~Li~~G~~D~~v~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~H~~~~~-~~~~~~~ 887 (953)
.+.+..++|+.++.+ ++.| +||+||++|.+|| +.++.+++++|+.. ++++++++++++||++... +......
T Consensus 596 ~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 673 (693)
T 3iuj_A 596 FDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVV--PAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQS 673 (693)
T ss_dssp HHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSC--THHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHH
T ss_pred HHHHHhcCHHHhhcccCCCCceeEEecCCCCCCC--hhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHH
Confidence 334667899999999 8987 9999999999999 99999999999987 5899999999999998653 4566788
Q ss_pred HHHHHHHHHhccCC
Q 002209 888 WETDRWLQKYCVSN 901 (953)
Q Consensus 888 ~~i~~fl~~~l~~~ 901 (953)
..+.+||.++|+..
T Consensus 674 ~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 674 ADIYAFTLYEMGYR 687 (693)
T ss_dssp HHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCC
Confidence 89999999999754
No 11
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.2e-45 Score=451.74 Aligned_cols=581 Identities=14% Similarity=0.092 Sum_probs=392.6
Q ss_pred eEeccCCCeEEEEEeeccccCCCCcceEEEEECC---CCceeecccCCCc--cccccccceEEecCCeEEEEEecCCCCC
Q 002209 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD---TGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 194 ~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~---~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
+..+|||++++|..... +.....||+++.. +++.+.|+..... ..+..+..++|||||++|+|+....+.
T Consensus 112 ~~p~pdG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~- 186 (741)
T 1yr2_A 112 GLPQRRGASVFYSWNSG----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS- 186 (741)
T ss_dssp CCCEEETTEEEEEEECS----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC-
T ss_pred CCCEEECCEEEEEEEcC----CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC-
Confidence 34459999999988633 3336899999987 7777765432210 001125689999999999998321100
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCCCcEE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l 346 (953)
...+|+++|+ +|+....... ..+..++|||| +.|
T Consensus 187 -------------------------------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l 222 (741)
T 1yr2_A 187 -------------------------------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DAL 222 (741)
T ss_dssp -------------------------------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEE
T ss_pred -------------------------------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEE
Confidence 1247999999 8876554322 33468999999 999
Q ss_pred EEEEecCCcc-ccccCCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 347 LISSIHRPYS-FIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 347 ~~~~~~~~~~-~~~~~~~~~~~i~~~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
+|++.+.+.. ..........+|++|++.++.. +.+...+.. .....++.|||||+.|++......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~~-- 290 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL----------PKRGHGASVSSDGRWVVITSSEGT-- 290 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECTT--
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC----------CeEEEEEEECCCCCEEEEEEEccC--
Confidence 9998654310 0001122345799999875432 233222110 012346899999999998843211
Q ss_pred CcccccccCCeEEEEecCCCCCC--C-ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeec
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQGE--G-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g~--~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 500 (953)
+....||++|+ +++ + .+.|.........+ ++|||+.|++..+.+..+.+||.++++++..+.+.++.
T Consensus 291 ------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 291 ------DPVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp ------CSCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred ------CCcceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 13558999996 444 5 66776554333334 56999999999887655678999998874112233433
Q ss_pred CCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeE
Q 002209 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (953)
Q Consensus 501 ~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~ 580 (953)
.....+.+ ++|+ +..+++..... ...+|++++++++..+.|...... .+.
T Consensus 361 ~~~~~l~~------~~~~--~~~lv~~~~~d------------------g~~~l~~~~~~g~~~~~l~~~~~~----~v~ 410 (741)
T 1yr2_A 361 ESKDNLES------VGIA--GNRLFASYIHD------------------AKSQVLAFDLDGKPAGAVSLPGIG----SAS 410 (741)
T ss_dssp CCSSEEEE------EEEE--BTEEEEEEEET------------------TEEEEEEEETTSCEEEECBCSSSC----EEE
T ss_pred CCCCeEEE------EEEE--CCEEEEEEEEC------------------CEEEEEEEeCCCCceeeccCCCCe----EEE
Confidence 22111111 3343 55565554321 244699999876666666532211 011
Q ss_pred eeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEcCC
Q 002209 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPP 660 (953)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~ 660 (953)
..++++|++.++|..++..+|..+|++++.+++.+.|+.... ......+..+.+++++.||.+|+++++.|+
T Consensus 411 -------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~~-~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~ 482 (741)
T 1yr2_A 411 -------GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVHL-TFDPADFRVEQVFYPSKDGTKVPMFIVRRK 482 (741)
T ss_dssp -------EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCCC-SSCGGGEEEEEEEEECTTSCEEEEEEEEET
T ss_pred -------EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCC-CCChhHCEEEEEEEEcCCCCEEEEEEEecC
Confidence 135788999999999999999999999999988777765221 123345678999999999999999999998
Q ss_pred CCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---hhhHH
Q 002209 661 GYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVE 737 (953)
Q Consensus 661 ~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~ 737 (953)
++ .++.|+||++|||+...... .| ......|+++||+|+.++++|..++|..+.. ..+..
T Consensus 483 ~~----~~~~p~vl~~hGg~~~~~~~---------~~----~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~ 545 (741)
T 1yr2_A 483 DA----KGPLPTLLYGYGGFNVALTP---------WF----SAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQ 545 (741)
T ss_dssp TC----CSCCCEEEECCCCTTCCCCC---------CC----CHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTH
T ss_pred CC----CCCCcEEEEECCCCCccCCC---------Cc----CHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCC
Confidence 75 23589999999986432210 11 1234578899999999888877777665432 22345
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCc-C----cccccchh--
Q 002209 738 QLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF-G----FQNEDRTL-- 810 (953)
Q Consensus 738 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~-~----~~~~~~~~-- 810 (953)
..++|+++++++|.+++++|++||+|+|+||||++++.++.++|++|+++|+.+|+.++..... . +....+.+
T Consensus 546 ~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~ 625 (741)
T 1yr2_A 546 NVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEK 625 (741)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTS
T ss_pred CcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCCC
Confidence 6789999999999999889999999999999999999999999999999999999987543211 0 00001111
Q ss_pred hhhHHHHHhcCcccccCC-CCC-cEEEEEeCCCCCCCCchHHHHHHHHHHHh---CCCcEEEEEeCCCCccCCCc-ccHH
Q 002209 811 WEATSTYVEMSPFMSANK-LKK-PILLVHGEEDNNSGTLTMQSDRFFNALKG---HGALCRLVILPFESHGYAAR-ESIM 884 (953)
Q Consensus 811 ~~~~~~~~~~sp~~~~~~-i~~-P~Li~~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~~-~~~~ 884 (953)
.+..+.+..++|+.++.+ ++. |+||+||++|.+|| +.++.+++++|+. .+.++++++++++||++... ....
T Consensus 626 ~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~ 703 (741)
T 1yr2_A 626 EADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVV--PGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQI 703 (741)
T ss_dssp HHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSC--THHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHH
T ss_pred HHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCC--hhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHH
Confidence 122345577899999987 884 99999999999999 9999999999999 88999999999999997542 3345
Q ss_pred HHHHHHHHHHHHhccCCC
Q 002209 885 HVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 885 ~~~~~i~~fl~~~l~~~~ 902 (953)
.....+++||.++++...
T Consensus 704 ~~~~~~~~fl~~~l~~~~ 721 (741)
T 1yr2_A 704 EETADVQAFLAHFTGLTP 721 (741)
T ss_dssp HHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHcCCCc
Confidence 788899999999996543
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=3.4e-43 Score=428.03 Aligned_cols=574 Identities=13% Similarity=0.058 Sum_probs=388.5
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEEC---CCC--ceeecccCCC---ccccccccceEEe-cCCeEEEE
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV---DTG--KARPLFQSPD---IYLNAIFDNFVWV-NNSTLLVC 260 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~---~~g--~~~~lt~~~~---~~~~~~~~~~~ws-pDg~~l~~ 260 (953)
..+.|. ++|++++|.+... +.....+|+.+. +++ ..+.+..... ..-...+..+.|| |||++|+|
T Consensus 118 ~~~~p~--~~g~~~yy~~~~~----g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy 191 (751)
T 2xe4_A 118 DMSAPY--VYGKYRYYTREVK----GKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAF 191 (751)
T ss_dssp EECCCE--EETTEEEEEEECT----TCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEE
T ss_pred cCCCCe--EECCEEEEEEECC----CCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEE
Confidence 445554 7899999987532 333567888886 554 3333332210 0000014578999 99999999
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-ceeEeCCC--Ccccc
Q 002209 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVKEIGPP--AVYTS 336 (953)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-~~~~l~~~--~~~~~ 336 (953)
+....+. ...+||++|+ +| +. +... ....+
T Consensus 192 ~~~~~G~--------------------------------------------~~~~l~v~dl~~g~~~--l~~~~~~~~~~ 225 (751)
T 2xe4_A 192 SVDMSGN--------------------------------------------EVYTIEFKRISDPSQT--IADKVSGTNGE 225 (751)
T ss_dssp EEESSSS--------------------------------------------SCEEEEEEETTCTTCC--CCCCEEEECSC
T ss_pred EEeCCCC--------------------------------------------ceEEEEEEECCCCCEe--CCccccCceee
Confidence 8321100 1246999999 77 52 2222 33568
Q ss_pred cccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE--EEeccCCCcccCCccccccccCccceeeccCCCCce
Q 002209 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (953)
Q Consensus 337 ~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~ 414 (953)
++|||||+.|+|++.+.. ....+|+++++.++.. +.+...+.. ....++.|||||+.|+
T Consensus 226 ~~WspDg~~l~y~~~d~~--------~~~~~v~~~~lgt~~~~~~lv~~~~~~-----------~~~~~~~~SpDg~~l~ 286 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDET--------LRENKVWRHVMGKLQSEDVCLYEEHNP-----------LFSAFMYKAADTNTLC 286 (751)
T ss_dssp CEECSSTTEEEEEEECTT--------CCEEEEEEEETTSCGGGCEEEEECCCT-----------TCEEEEEECTTSSEEE
T ss_pred EEEecCCCEEEEEEECCC--------CCCCEEEEEECCCCchhcEEEEecCCC-----------ceEEEEEECCCCCEEE
Confidence 999999999999985431 1123799999986532 233221100 1123578999999999
Q ss_pred EEEEeccCCCcccccccCCeEEEEecCCCCCC--Cc--eEEeecccccCCeeeccC---CceEEEEEecc-cCceEEEEE
Q 002209 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE--GP--EILHKLDLRYGGISWCDD---SLALVYESWYK-TRRTRTWVI 486 (953)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~--~~--~~l~~~~~~~~~~~~SpD---g~~l~~~~~~~-~~~~~l~~~ 486 (953)
|.... .....||++++ +++ +. +.++... ..+.|++| |+.|+|.++.+ ..+.+||.+
T Consensus 287 ~~~~~----------~~~~~l~~~d~---~~~~~~~~~~~l~~~~---~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~ 350 (751)
T 2xe4_A 287 IGSQS----------PETAEVHLLDL---RKGNAHNTLEIVRPRE---KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIA 350 (751)
T ss_dssp EEEEC----------SSCEEEEEEES---SSCTTCCCEEESSCCC---TTCCEEEEEETTTEEEEEECTTTCTTCEEEEE
T ss_pred EEecC----------CCCceEEEEEC---CCCCCCceeEEeecCC---CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEE
Confidence 87432 12458999996 333 34 5554332 34567776 99999988875 456799999
Q ss_pred cCCCCCCCcE-EeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEEC------
Q 002209 487 SPGSKDVAPR-ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI------ 559 (953)
Q Consensus 487 d~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~------ 559 (953)
+++++..-.. ++.......+ ..+++++++|++..... ...+|+++|+
T Consensus 351 d~~~~~~~~~~li~~~~~~~l--------~~~~~~~~~lv~~~~~~------------------g~~~l~~~dl~~~~~~ 404 (751)
T 2xe4_A 351 PRGQPSDWSHVLVDHSEDVFM--------ESIAVRSNYLVVAGRRA------------------GLTRIWTMMADSQDGV 404 (751)
T ss_dssp ETTSTTCCCCEEECCCSSEEE--------EEEEECSSEEEEEEEET------------------TEEEEEEEECCTTTSC
T ss_pred cCCCcccceeeEECCCCCcEE--------EEEEEECCEEEEEEEeC------------------CEEEEEEEeccccccc
Confidence 9875311122 3332211111 23566677887776432 2456899996
Q ss_pred -CCCc-eEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCC-CCCcCC
Q 002209 560 -NTGS-KERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP-YPQLAS 636 (953)
Q Consensus 560 -~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~-~~~~~~ 636 (953)
++++ .++|.-.... + ...+ . ....++++++.+++..++..+|+.+|.+++.+++.+.|+..+.. ......
T Consensus 405 ~~~g~~~~~l~l~~~~-~---~~~~-~--~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~~~~ 477 (751)
T 2xe4_A 405 FKAGTGLREVVMEEPI-F---TVHL-V--ESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAAN 477 (751)
T ss_dssp CCTTTCCEECCCCCSS-C---EEEE-C--GGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCCGGG
T ss_pred ccCCccceEECCCCce-e---EEEe-c--cCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCCccc
Confidence 5666 6666432211 0 1111 0 00011567889999999999999999999999998888865432 122234
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
+..+.+++++.||.+|+++++.|+++++. +++|+||++|||+...... .|. ...+.|+++||+|+
T Consensus 478 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~--~~~P~vl~~HGg~~~~~~~---------~~~----~~~~~l~~~G~~v~ 542 (751)
T 2xe4_A 478 YKVERRFATAPDQTKIPLSVVYHKDLDMS--QPQPCMLYGYGSYGLSMDP---------QFS----IQHLPYCDRGMIFA 542 (751)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEETTSCTT--SCCCEEEECCCCTTCCCCC---------CCC----GGGHHHHTTTCEEE
T ss_pred eEEEEEEEECCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCcCCCC---------cch----HHHHHHHhCCcEEE
Confidence 56899999999999999999999876433 3589999999986432211 121 12457889999999
Q ss_pred EcCCCCCCCCCChhhh----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEccc
Q 002209 717 GGPTTPIIGEGDEEAN----DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~~----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (953)
.++++|..++|..+.. .......++|+++++++|.+++++|++||+|+|+|+||+++++++.++|++|+|+|+.+|
T Consensus 543 ~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~ 622 (751)
T 2xe4_A 543 IAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVP 622 (751)
T ss_dssp EECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESC
T ss_pred EEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCC
Confidence 9999988888876543 233457899999999999999989999999999999999999999999999999999999
Q ss_pred CCCCCCC------CcC--cccccchh--hhhHHHHHhcCcccccCCCCCc-EEEEEeCCCCCCCCchHHHHHHHHHHHhC
Q 002209 793 AYNRTLT------PFG--FQNEDRTL--WEATSTYVEMSPFMSANKLKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGH 861 (953)
Q Consensus 793 ~~d~~~~------~~~--~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P-~Li~~G~~D~~v~~~~~~~~~~~~~l~~~ 861 (953)
+.|+... ++. .....+.+ .+..+.+..++|+.++.+++.| +||+||++|.+|| +.++.+++++|+..
T Consensus 623 ~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp--~~~~~~~~~~L~~~ 700 (751)
T 2xe4_A 623 FVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVA--YWEPAKWVSKLREC 700 (751)
T ss_dssp CCCHHHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSC--THHHHHHHHHHHHH
T ss_pred cchHHhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCC--HHHHHHHHHHHHhc
Confidence 8774211 100 00011111 1112345678999999999997 9999999999999 99999999999987
Q ss_pred C---CcEEEEEeCCCCccCCCcc-cHHHHHHHHHHHHHHhccC
Q 002209 862 G---ALCRLVILPFESHGYAARE-SIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 862 g---~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~~~l~~ 900 (953)
+ ..+.+.+++++||++.... ........+.+||.++|+.
T Consensus 701 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 701 KTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp CCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCC
Confidence 4 4566777899999985332 3445667899999999864
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=7.1e-35 Score=345.23 Aligned_cols=321 Identities=13% Similarity=0.081 Sum_probs=248.5
Q ss_pred CCeEEEEECCCCc--eEE-EeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecC
Q 002209 551 IPFLDLFDINTGS--KER-IWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDF 627 (953)
Q Consensus 551 ~~~L~~~d~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~ 627 (953)
...|+++|+.+|+ .+. +.-.... .... .+.++++..+++..++..+|+.+|.+++. ++.++|+..
T Consensus 371 ~~~l~~~~~~~g~~~~~~~i~lp~~~-----~~~~------~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 371 VAKVVTFTLENEQWTKPVVLKLPYQN-----AIFG------MSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp EEEEEEECEETTEECCCEEECCCSTT-----CEEE------EECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECC
T ss_pred EEEEEEEECCCCceEEEeccCCCCCe-----EEEE------EeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecC
Confidence 3468899987774 344 3222111 0111 23457788999999999999999999987 888888877
Q ss_pred CCCCCCcCCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHH
Q 002209 628 PHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLL 707 (953)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (953)
+..+. ...+.++.+++++.||.+|++++++|+++++. +++|+||++|||+...... .| .....+.
T Consensus 439 ~~~~~-~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~--~~~P~vl~~HGG~~~~~~~---------~~---~~~~~q~ 503 (711)
T 4hvt_A 439 LYSFD-SENYVLEQKEATSFDGVKIPYFLVYKKGIKFD--GKNPTLLEAYGGFQVINAP---------YF---SRIKNEV 503 (711)
T ss_dssp SSCCC-GGGEEEEEEEEECTTSCEEEEEEEEETTCCCS--SCCCEEEECCCCTTCCCCC---------CC---CHHHHHH
T ss_pred CcccC-cccCeeEEEEEECCCCeEEEEEEEecCCCCCC--CCccEEEEECCCCCCCCCC---------cc---cHHHHHH
Confidence 54433 23457899999999999999999999986543 3599999999986543211 11 1222347
Q ss_pred HHHcCcEEEEcCCCCCCCCCChhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcc
Q 002209 708 WLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (953)
Q Consensus 708 la~~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 784 (953)
|+++||+|+.++++|..|+|..+.. ..+....++|+++++++|.+++.+|++||+|+|+|+||+++++++.++|++|
T Consensus 504 la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f 583 (711)
T 4hvt_A 504 WVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELF 583 (711)
T ss_dssp TGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGC
T ss_pred HHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCce
Confidence 8999999999999998888876542 3456788999999999999999999999999999999999999999999999
Q ss_pred cEEEEcccCCCCCCCCcC-----cccccchhh--hhHHHHHhcCcccccCCCCC--cEEEEEeCCCCCCCCchHHHHHHH
Q 002209 785 CCGIARSGAYNRTLTPFG-----FQNEDRTLW--EATSTYVEMSPFMSANKLKK--PILLVHGEEDNNSGTLTMQSDRFF 855 (953)
Q Consensus 785 ~a~v~~~~~~d~~~~~~~-----~~~~~~~~~--~~~~~~~~~sp~~~~~~i~~--P~Li~~G~~D~~v~~~~~~~~~~~ 855 (953)
+|+|+.+|++|+...... +....+.++ +..+.+..+||+.++.++++ |+||+||++|.+|| +.++.+++
T Consensus 584 ~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp--~~~s~~~~ 661 (711)
T 4hvt_A 584 GAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVH--PWHGRIFE 661 (711)
T ss_dssp SEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSC--THHHHHHH
T ss_pred EEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCC--hHHHHHHH
Confidence 999999999886432110 001111111 23455778899999999987 99999999999999 99999999
Q ss_pred HHH-HhCCCcEEEEEeCCCCccCCCc-ccHHHHHHHHHHHHHHhccC
Q 002209 856 NAL-KGHGALCRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 856 ~~l-~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l~~ 900 (953)
++| +..|++++++++|++||++... .........+.+||.++|+.
T Consensus 662 ~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 662 YVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp HHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 999 9999999999999999998543 33456677889999999863
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=1.6e-23 Score=235.59 Aligned_cols=329 Identities=13% Similarity=0.080 Sum_probs=206.2
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCc
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~ 190 (953)
...++|||||++|+|.+.. ++.. +||++|+.+ ++.++++... +..
T Consensus 38 ~~~~~~SpDg~~l~~~~~~------------------------~g~~------~l~~~d~~~----g~~~~lt~~~-~~~ 82 (388)
T 3pe7_A 38 FYQKCFTRDGSKLLFGGAF------------------------DGPW------NYYLLDLNT----QVATQLTEGR-GDN 82 (388)
T ss_dssp TTSCCBCTTSCEEEEEECT------------------------TSSC------EEEEEETTT----CEEEECCCSS-CBC
T ss_pred hcCccCCCCCCEEEEEEcC------------------------CCCc------eEEEEeCCC----CceEEeeeCC-CCC
Confidence 3458999999999999873 1222 689999854 5666665322 113
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceE--EecCCeEEEEEecCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFV--WVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~--wspDg~~l~~~~~~~~~~ 268 (953)
...+.|||||++|+|... ...||++|+++++.+.++..+... ..... ++|||+.++.........
T Consensus 83 ~~~~~~spdg~~l~~~~~---------~~~l~~~d~~~g~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKD---------GRNLMRVDLATLEENVVYQVPAEW----VGYGTWVANSDCTKLVGIEIRREDW 149 (388)
T ss_dssp SSSCEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECCTTE----EEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred ccceEEcCCCCEEEEEeC---------CCeEEEEECCCCcceeeeechhhc----ccccceeECCCCCeeccccccCccc
Confidence 447899999999999763 458999999999988887655532 22233 479999888652110000
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCC-CCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSP-DEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~Sp-DG~~ 345 (953)
. .......+.. .+.......|+++|+ +|+.+.++.. ..+..+.||| ||++
T Consensus 150 ~------------------~~~~~~~~~~---------~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~ 202 (388)
T 3pe7_A 150 V------------------PLTDWKKFHE---------FYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDST 202 (388)
T ss_dssp C------------------CCCSHHHHHH---------HGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEE
T ss_pred c------------------cccccchhhh---------hhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCE
Confidence 0 0000000000 000113368999999 8888888765 6678899999 9999
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
|+|...... ......|++++++++..+.++..... ..+..+.|||||+.|+|......
T Consensus 203 l~~~~~~~~-------~~~~~~l~~~d~~~~~~~~l~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~~---- 260 (388)
T 3pe7_A 203 VAFCHEGPH-------DLVDARMWLINEDGTNMRKVKTHAEG-----------ESCTHEFWVPDGSALVYVSYLKG---- 260 (388)
T ss_dssp EEEEECSCT-------TTSSCSEEEEETTSCCCEESCCCCTT-----------EEEEEEEECTTSSCEEEEEEETT----
T ss_pred EEEEEecCC-------CCCcceEEEEeCCCCceEEeeeCCCC-----------cccccceECCCCCEEEEEecCCC----
Confidence 999985311 11134899999998888877653310 01246789999999999843321
Q ss_pred ccccccCCeEEEEecCCCCCCCceEEeeccc------ccCCeeeccCCceEEEEEecc-----cCceEEEEEcCCCCCCC
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYK-----TRRTRTWVISPGSKDVA 494 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~------~~~~~~~SpDg~~l~~~~~~~-----~~~~~l~~~d~~~~~~~ 494 (953)
.....|+++|+ .+++.+.++.... ....+.|||||+.|++..... .....||+++++++ +
T Consensus 261 ----~~~~~l~~~d~---~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~ 331 (388)
T 3pe7_A 261 ----SPDRFIYSADP---ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG--T 331 (388)
T ss_dssp ----CCCEEEEEECT---TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT--E
T ss_pred ----CCcceEEEEec---CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC--c
Confidence 11225999996 6677666655433 134568999999999875421 23358999999885 4
Q ss_pred cEEeecCCCccc--cC--CCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCc
Q 002209 495 PRILFDRSSEDV--YS--DPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (953)
Q Consensus 495 ~~~~~~~~~~~~--~~--~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~ 563 (953)
...++....... .. ......++|||||++|+|..... ..++||++|+..+.
T Consensus 332 ~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~------------------g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 332 QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH------------------GKPALYLATLPESV 386 (388)
T ss_dssp EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT------------------SSCEEEEEECCGGG
T ss_pred eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCC------------------CceeEEEEECChhc
Confidence 455554432000 00 00011167999999999987321 35679999987543
No 15
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=4.3e-23 Score=231.94 Aligned_cols=344 Identities=13% Similarity=0.102 Sum_probs=215.9
Q ss_pred CceeeeecCCCCC---cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEec
Q 002209 177 GQEIEIQGFPDGA---KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN 253 (953)
Q Consensus 177 ~~~~~l~~~~~~~---~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp 253 (953)
...++|+..+... ....|+|||||++|+|.+. .++..+||++|+++|+.++++...... +..+.|||
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~------~~g~~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~sp 90 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGA------FDGPWNYYLLDLNTQVATQLTEGRGDN----TFGGFLSP 90 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEEC------TTSSCEEEEEETTTCEEEECCCSSCBC----SSSCEECT
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEc------CCCCceEEEEeCCCCceEEeeeCCCCC----ccceEEcC
Confidence 4556665433111 2334999999999999874 345779999999999999998766532 33678999
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-
Q 002209 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP- 331 (953)
Q Consensus 254 Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~- 331 (953)
||+.|+|.. ....|+++|+ +|+.+.+...
T Consensus 91 dg~~l~~~~-------------------------------------------------~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 91 DDDALFYVK-------------------------------------------------DGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp TSSEEEEEE-------------------------------------------------TTTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEe-------------------------------------------------CCCeEEEEECCCCcceeeeech
Confidence 999999881 1247889999 8877666543
Q ss_pred -Ccc--cccccCCCCcEEEEEEecCCcccc---------ccCCCCCcceEEEeccCceEEEeccCCCcccCCcccccccc
Q 002209 332 -AVY--TSLDPSPDEKYILISSIHRPYSFI---------VPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRK 399 (953)
Q Consensus 332 -~~~--~~~~~SpDG~~l~~~~~~~~~~~~---------~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~ 399 (953)
... ....++|||+.|+........... .........|+++|+++++.+.++....
T Consensus 122 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~------------- 188 (388)
T 3pe7_A 122 AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ------------- 188 (388)
T ss_dssp TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-------------
T ss_pred hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-------------
Confidence 222 223459999999876533210000 0001223589999999888887765431
Q ss_pred Cccceeecc-CCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecc--cccCCeeeccCCceEEEEEec
Q 002209 400 GMRSINWRS-DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD--LRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 400 ~~~~~~wsp-Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~--~~~~~~~~SpDg~~l~~~~~~ 476 (953)
.+..+.||| ||+.|+|....... .....||++++ ++++.+.++... ..+..+.|||||++|+|.+..
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~-------~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHD-------LVDARMWLINE---DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTT-------TSSCSEEEEET---TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred cccccEECCCCCCEEEEEEecCCC-------CCcceEEEEeC---CCCceEEeeeCCCCcccccceECCCCCEEEEEecC
Confidence 235689999 99999998431100 12458999996 677777776554 235678999999999998765
Q ss_pred ccC-ceEEEEEcCCCCCCCcEEeecCCCc-cccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeE
Q 002209 477 KTR-RTRTWVISPGSKDVAPRILFDRSSE-DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (953)
Q Consensus 477 ~~~-~~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 554 (953)
.+. ...||++|++++ +.+.+...... .....+.. ..|||||++|++...+. .+.. ......|
T Consensus 259 ~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~~--~~~spdg~~l~~~~~~~-----------~~~~-~~~~~~i 322 (388)
T 3pe7_A 259 KGSPDRFIYSADPETL--ENRQLTSMPACSHLMSNYDG--SLMVGDGSDAPVDVQDD-----------SGYK-IENDPFL 322 (388)
T ss_dssp TTCCCEEEEEECTTTC--CEEEEEEECCEEEEEECTTS--SEEEEEECCC------------------------CCCCEE
T ss_pred CCCCcceEEEEecCCC--ceEEEEcCCCceeeeecCCC--CeEccCCCcceeEeeec-----------cccc-cCCCCEE
Confidence 433 235999999986 44444332210 00000011 46999999999875321 0000 1124569
Q ss_pred EEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002209 555 DLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (953)
Q Consensus 555 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~ 620 (953)
|+||+++++.++|+..... +......-......++|||||+.+++..... ...+||.+++..+.
T Consensus 323 ~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 323 YVFNMKNGTQHRVARHDTS-WKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPESV 386 (388)
T ss_dssp EEEETTTTEEEEEEECCCC-CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGGG
T ss_pred EEEeccCCceEEeccccCc-ccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChhc
Confidence 9999999999998876641 0000000000123468999999999887654 45689999986553
No 16
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=1.7e-22 Score=247.03 Aligned_cols=336 Identities=10% Similarity=0.034 Sum_probs=215.9
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCc-cccccccceEEecCCeEEEEEecCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI-YLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~-~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
....+.|||||+.|+.. ...|+++++++|+.+.+...... ..+.....+.|||||+.|++.....
T Consensus 18 ~~~~~~w~~dg~~~~~~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~--- 83 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-----------ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYV--- 83 (740)
T ss_dssp CCCCEEECSSSEEEEEE-----------TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEE---
T ss_pred cccccEECCCCcEEEEc-----------CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCe---
Confidence 35679999999766651 34899999999988777554431 1111123489999999999883211
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCCCcEE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l 346 (953)
..+.+...+.+|++|+ +|+.++++.. ..+..++|||||++|
T Consensus 84 -------------------------------------~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 84 -------------------------------------KQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp -------------------------------------ECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCE
T ss_pred -------------------------------------eeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEE
Confidence 1111114478999999 8988888875 778899999999999
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcc----cCCccccc--cccCccceeeccCCCCceEEEEec
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE----DIPIAFNS--VRKGMRSINWRSDKPSTLYWAETQ 420 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~----~~p~~~~~--~~~~~~~~~wspDg~~i~~~~~~~ 420 (953)
||++. .+|++|+++++..++|+...... ..+.+... .....+.+.|||||+.|+|.....
T Consensus 127 a~~~~--------------~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 127 AYVWN--------------NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (740)
T ss_dssp EEEET--------------TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred EEEEC--------------CeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc
Confidence 99972 38999999988888887643221 11111100 012345699999999999983211
Q ss_pred c-CCCccc----------------------ccccCCeEEEEecCCCCC---C---CceEEee------cccccCCeeecc
Q 002209 421 D-GGDAKV----------------------EVTPRDIIYTQQAEPVQG---E---GPEILHK------LDLRYGGISWCD 465 (953)
Q Consensus 421 ~-~~~~~~----------------------~~~~~~~l~~~d~~~~~g---~---~~~~l~~------~~~~~~~~~~Sp 465 (953)
. -..+.. .......|+++|+ ++ + +.+.+.. .+..+..++|||
T Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp 269 (740)
T 4a5s_A 193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT---DSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 269 (740)
T ss_dssp TTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET---TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE
T ss_pred cCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC---CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC
Confidence 1 000000 0011236899996 55 4 4455543 344456789999
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCC-----CcEEe-ecCCCccccC-CCCCCCeEeccCCCEEEEEeeeccCCCcEE
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDV-----APRIL-FDRSSEDVYS-DPGSPMMRRTSTGTYVIAKIKKENDEGTYI 538 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~-----~~~~~-~~~~~~~~~~-~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~ 538 (953)
||+.+++..++.+....|+++|++++.. ....+ .+.....+.. .... +.|||||+++++.....
T Consensus 270 dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~--p~fspDG~~l~~~~s~~------- 340 (740)
T 4a5s_A 270 QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE--PHFTLDGNSFYKIISNE------- 340 (740)
T ss_dssp TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC--CEECTTSSEEEEEEECT-------
T ss_pred CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCC--ceEcCCCCEEEEEEEcC-------
Confidence 9998888877766556899999888630 11222 2222211110 0112 56999999988433211
Q ss_pred EEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEec--C-CCCceEEEEE
Q 002209 539 LLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKES--K-TENTQYYIQS 615 (953)
Q Consensus 539 ~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~-~~p~~l~~~~ 615 (953)
....+||+||+++++.++||.+... +... +++|++.++|.... . ....+||.++
T Consensus 341 ----------~G~~~l~~~~~~~~~~~~lT~g~~~-----v~~~--------~~~d~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 341 ----------EGYRHICYFQIDKKDCTFITKGTWE-----VIGI--------EALTSDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp ----------TSCEEEEEEETTCSSCEESCCSSSC-----EEEE--------EEECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ----------CCceEEEEEECCCCceEecccCCEE-----EEEE--------EEEeCCEEEEEEecCCCCCceeEEEEEE
Confidence 1256899999999999999988654 2221 23568888887765 1 2346899999
Q ss_pred CCCCCee-EEe
Q 002209 616 WPDKKSC-QIT 625 (953)
Q Consensus 616 ~~~g~~~-~Lt 625 (953)
+.+++.+ .||
T Consensus 398 ~~g~~~~~~lt 408 (740)
T 4a5s_A 398 LIDYTKVTCLS 408 (740)
T ss_dssp TTEEEEEEESS
T ss_pred CCCCCcceeec
Confidence 8776654 566
No 17
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=2.6e-22 Score=254.91 Aligned_cols=387 Identities=13% Similarity=0.055 Sum_probs=247.1
Q ss_pred CCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCC
Q 002209 108 APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD 187 (953)
Q Consensus 108 ~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~ 187 (953)
...+..++||| ++|||.+.. +||+|++.+ +..++|+.++
T Consensus 14 ~~~~~~~~~S~--~~iaf~~~~----------------------------------~l~~~~~~g----g~~~~lt~~~- 52 (1045)
T 1k32_A 14 PNLLLNPDIHG--DRIIFVCCD----------------------------------DLWEHDLKS----GSTRKIVSNL- 52 (1045)
T ss_dssp CCCCEEEEEET--TEEEEEETT----------------------------------EEEEEETTT----CCEEEEECSS-
T ss_pred cceEeCcEEeC--CEEEEEECC----------------------------------cEEEEECCC----CcEEEeeeCC-
Confidence 34567899995 699999864 789999843 5677787543
Q ss_pred CCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccc-------cceEEecCCeEEEE
Q 002209 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIF-------DNFVWVNNSTLLVC 260 (953)
Q Consensus 188 ~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~-------~~~~wspDg~~l~~ 260 (953)
..+..++|||||++|||.+... ..++..+||++++++|+.++|+.+... + ..++|||||+ |+|
T Consensus 53 -~~v~~~~~SPDG~~la~~s~~~---~~~~~~~i~~~d~~~g~~~~lt~~~~~-----~~~~~~~~~~~~~SpDg~-ll~ 122 (1045)
T 1k32_A 53 -GVINNARFFPDGRKIAIRVMRG---SSLNTADLYFYNGENGEIKRITYFSGK-----STGRRMFTDVAGFDPDGN-LII 122 (1045)
T ss_dssp -SEEEEEEECTTSSEEEEEEEES---TTCCEEEEEEEETTTTEEEECCCCCEE-----EETTEECSEEEEECTTCC-EEE
T ss_pred -CcccCeEECCCCCEEEEEEeec---cCCCCCeEEEEECCCCCeEEcccCCCc-----ccccccccccccCCCCCE-EEE
Confidence 4689999999999999987531 113567999999999999999876542 4 6899999999 555
Q ss_pred EecCCC---C-C-C----------CCCCCCCCCCceeecCCCcccc------------------chhhhh----------
Q 002209 261 TIPLLR---G-D-P----------PKKPLVPLGPKMQSNEKRDIIQ------------------VRTFQD---------- 297 (953)
Q Consensus 261 ~~~~~~---~-~-~----------~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~---------- 297 (953)
+..... . . . ......+.....++. + .+.. .+.|..
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~ 200 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV 200 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECc
Confidence 533210 0 0 0 000000000000000 0 0000 000000
Q ss_pred -------hcCCcchhhhhhh---hccceEEEEEc-CCceeEeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCc
Q 002209 298 -------LLKDEYDEDLFDY---YATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPR 366 (953)
Q Consensus 298 -------~~~~~~d~~~~~~---~~~~~l~~~~~-~g~~~~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~ 366 (953)
......+ .++.. .+...||.++. ++..+.++....+..++|||||++|+|.. + .
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~-~-------------~ 265 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK-G-------------G 265 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE-T-------------T
T ss_pred CCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe-C-------------C
Confidence 0000011 11100 03457999998 66777777665566779999999999985 2 3
Q ss_pred ceEEEeccCceEEEeccCCCcccCCccccccccCccceeec-cCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCC
Q 002209 367 QVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG 445 (953)
Q Consensus 367 ~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ws-pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g 445 (953)
.|++|+++++....+...... ..+. +......+..++|| |||+.|++.. ...++++++ .+
T Consensus 266 ~i~~~d~~~~~l~~l~~~~~~-~~~~-~~~~~~~v~~~~~S~pdG~~la~~~--------------~~~i~~~~~---~~ 326 (1045)
T 1k32_A 266 SIYIFNPDTEKIEKIEIGDLE-SPED-RIISIPSKFAEDFSPLDGDLIAFVS--------------RGQAFIQDV---SG 326 (1045)
T ss_dssp EEEEECTTTCCEEECCCCCCC-BCCS-EEEECGGGGEEEEEECGGGCEEEEE--------------TTEEEEECT---TS
T ss_pred EEEEecCCceEeeeeccCccc-cccc-ccccccccceeeecCCCCCEEEEEE--------------cCEEEEEcC---CC
Confidence 899999976555544331110 0010 00112345789999 9999999872 457899985 55
Q ss_pred CCceEEeeccc-ccCCeeeccCCceEEEEEecccCceEEE-EEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCE
Q 002209 446 EGPEILHKLDL-RYGGISWCDDSLALVYESWYKTRRTRTW-VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTY 523 (953)
Q Consensus 446 ~~~~~l~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~ 523 (953)
++.+.+..... .+..++|| ||+.|++.+. ..+|| +++++++ +...+. .....+.. +.|||||++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~-~~~~~~~~------~~~SpDG~~ 392 (1045)
T 1k32_A 327 TYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFE-ENLGNVFA------MGVDRNGKF 392 (1045)
T ss_dssp SBEEECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECC-CCCCSEEE------EEECTTSSE
T ss_pred CceEEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEec-CCccceee------eEECCCCCE
Confidence 66666655555 67789999 9999999875 24899 9998875 344444 22222222 789999999
Q ss_pred EEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEe
Q 002209 524 VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKE 603 (953)
Q Consensus 524 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 603 (953)
|++...+ ..|++||+.+++.+.+...... .....+|||||+.+++...
T Consensus 393 la~~~~~---------------------~~v~~~d~~tg~~~~~~~~~~~-----------~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 393 AVVANDR---------------------FEIMTVDLETGKPTVIERSREA-----------MITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp EEEEETT---------------------SEEEEEETTTCCEEEEEECSSS-----------CCCCEEECTTSCEEEEEEE
T ss_pred EEEECCC---------------------CeEEEEECCCCceEEeccCCCC-----------CccceEECCCCCeEEEEec
Confidence 9987631 2599999999998888743321 0123579999999988876
Q ss_pred cC------CCCceEEEEECCCCCeeEEecC
Q 002209 604 SK------TENTQYYIQSWPDKKSCQITDF 627 (953)
Q Consensus 604 ~~------~~p~~l~~~~~~~g~~~~Lt~~ 627 (953)
.. ..+..++++++.+++...++..
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~ 470 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEGRKIFAATTE 470 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTTTEEEECSCS
T ss_pred CccccccCCCCCeEEEEECCCCcEEEeeCC
Confidence 54 3456899999988876666643
No 18
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=3.3e-22 Score=244.56 Aligned_cols=339 Identities=12% Similarity=0.059 Sum_probs=202.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|||...+ . ...+..+...|++||+.+ ++.++++......
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~-----------------------~-~~~~~~~~~~i~~~d~~~----~~~~~l~~~~~~~ 113 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNV-----------------------E-PIYQHSYTGYYVLSKIPH----GDPQSLDPPEVSN 113 (723)
T ss_dssp TCSEEEECTTSSEEEEEESC-----------------------C-CCSSSCCCSEEEEEESSS----CCCEECCCTTCCS
T ss_pred ccceEEECCCCCEEEEEecC-----------------------c-cceeecceeeEEEEECCC----CceEeccCCcccc
Confidence 36789999999999999874 1 111111224789999954 3345554332221
Q ss_pred -cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc--c------------ccccceEEecC
Q 002209 190 -KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL--N------------AIFDNFVWVNN 254 (953)
Q Consensus 190 -~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~--~------------~~~~~~~wspD 254 (953)
.+..++|||||++|||.+ ..+||++++++|+.++++..+.... + ..+..++||||
T Consensus 114 ~~~~~~~~SPdG~~la~~~----------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD 183 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIF----------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD 183 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEE----------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT
T ss_pred ccccccEECCCCCEEEEEE----------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCC
Confidence 478899999999999976 2489999999999888876533210 0 01247999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-
Q 002209 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP- 331 (953)
Q Consensus 255 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~- 331 (953)
|+.|++...+.............+. .... ...+....++.. .....|+++|+ +++. +.+..+
T Consensus 184 g~~la~~~~~~~~~~~~~~~~~~~~-----~~~~-------~~~~~~~~~G~~---~~~~~l~~~d~~~~~~~~~l~~~~ 248 (723)
T 1xfd_A 184 GTRLAYAAINDSRVPIMELPTYTGS-----IYPT-------VKPYHYPKAGSE---NPSISLHVIGLNGPTHDLEMMPPD 248 (723)
T ss_dssp SSEEEEEEEECTTSCEEEECCCSSS-----SSCC-------CEEEECCBTTSC---CCEEEEEEEESSSSCCCEECCCCC
T ss_pred CCEEEEEEECCCccceEEeeccCCc-----CCCc-------ceeccCCCCCCC---CCeeEEEEEECCCCceeEEeeCCc
Confidence 9999998543321100000000000 0000 000111111110 12358999999 7763 666542
Q ss_pred ------CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCcccee
Q 002209 332 ------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (953)
Q Consensus 332 ------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (953)
..+..++|||||++|++...+.. ....|++||+++++.+.+........ .......++
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---------~~~~i~~~d~~~g~~~~~~~~~~~~~-------~~~~~~~~~ 312 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQ---------NVSILTLCDATTGVCTKKHEDESEAW-------LHRQNEEPV 312 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTS---------CEEEEEEEETTTCCEEEEEEEECSSC-------CCCCCCCCE
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCC---------CeEEEEEEeCCCCcceEEEEeccCCE-------EeccCCCce
Confidence 34567999999998877764421 12379999998777665543210000 000013689
Q ss_pred eccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC---ceEEeecccccCC-eeeccCCceEEEEEeccc-Cc
Q 002209 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEILHKLDLRYGG-ISWCDDSLALVYESWYKT-RR 480 (953)
Q Consensus 406 wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~---~~~l~~~~~~~~~-~~~SpDg~~l~~~~~~~~-~~ 480 (953)
|||||+.|+|.....++.. ....+||++++ .+++. .+.++.+...+.. +.|||||+.|+|.+..+. ..
T Consensus 313 ~spdg~~l~~~~~~~~~~~-----~~~~~l~~~d~--~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 385 (723)
T 1xfd_A 313 FSKDGRKFFFIRAIPQGGR-----GKFYHITVSSS--QPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRR 385 (723)
T ss_dssp ECTTSCSEEEEEEECCSSS-----SCEEEEEEECS--SCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTC
T ss_pred EcCCCCeEEEEEecccCCC-----cceeEEEEEec--cCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcc
Confidence 9999999998733322210 11347888882 25565 6667655554444 689999999999876541 34
Q ss_pred eEEEEEcCCCCCCCcEEeecC--CCccccCCCCCCCeEeccCCCEEEEEeeec
Q 002209 481 TRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKIKKE 531 (953)
Q Consensus 481 ~~l~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~ 531 (953)
.+||.++.+++ .....++.. ....+.. ++|||||+++++.....
T Consensus 386 ~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~------~~~spdg~~l~~~~~~~ 431 (723)
T 1xfd_A 386 RQLYSANTVGN-FNRQCLSCDLVENCTYFS------ASFSHSMDFFLLKCEGP 431 (723)
T ss_dssp CEEEEECSSTT-CCCBCSSTTSSSSCCCCE------EEECTTSSEEEEECCSS
T ss_pred eEEEEEeCCCC-CCcceecccccCCCCeEE------EEECCCCCEEEEEccCC
Confidence 58999998764 123333321 1111111 78999999999887543
No 19
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.89 E-value=8.8e-22 Score=205.12 Aligned_cols=222 Identities=18% Similarity=0.206 Sum_probs=166.0
Q ss_pred CCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEE
Q 002209 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (953)
Q Consensus 636 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (953)
.+..+.++++. +|..+.++++.|++. +++.|+||++||... ........+..|+++||.|
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~----~~~~p~vv~~HG~~g---------------~~~~~~~~~~~l~~~G~~v 62 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA----DGPLPIVIVVQEIFG---------------VHEHIRDLCRRLAQEGYLA 62 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC----CSCEEEEEEECCTTC---------------SCHHHHHHHHHHHHTTCEE
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC----CCCCCEEEEEcCcCc---------------cCHHHHHHHHHHHHCCcEE
Confidence 35677888988 889999999999752 235899999999421 1111234566788999999
Q ss_pred EEcCCCCCCCCCChhhh----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCccc
Q 002209 716 LGGPTTPIIGEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC 785 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~----------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 785 (953)
+.+++++..|....... .........|+.++++++.+++ +|.++|+|+|||+||.+++.++.++|+ ++
T Consensus 63 ~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~ 140 (241)
T 3f67_A 63 IAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LK 140 (241)
T ss_dssp EEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CC
T ss_pred EEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cc
Confidence 99777543332111110 1123467899999999999887 788999999999999999999999987 77
Q ss_pred EEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcE
Q 002209 786 CGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALC 865 (953)
Q Consensus 786 a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 865 (953)
++|+..+........ +...+|...+.++++|+|++||++|..+| ++++.++++.+++.+.++
T Consensus 141 ~~v~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~ 202 (241)
T 3f67_A 141 AAVAWYGKLVGEKSL----------------NSPKHPVDIAVDLNAPVLGLYGAKDASIP--QDTVETMRQALRAANATA 202 (241)
T ss_dssp EEEEESCCCSCCCCS----------------SSCCCHHHHGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHHHTTCSE
T ss_pred eEEEEeccccCCCcc----------------CCccCHHHhhhhcCCCEEEEEecCCCCCC--HHHHHHHHHHHHHcCCCc
Confidence 777776653211100 11234556677889999999999999998 999999999999999999
Q ss_pred EEEEeCCCCccCCC-------cccHHHHHHHHHHHHHHh
Q 002209 866 RLVILPFESHGYAA-------RESIMHVLWETDRWLQKY 897 (953)
Q Consensus 866 ~~~~~~~~~H~~~~-------~~~~~~~~~~i~~fl~~~ 897 (953)
+++++|+++|.+.. .+.....++.+.+||++|
T Consensus 203 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 203 EIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp EEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 99999999998852 233466778889998753
No 20
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=3.3e-21 Score=216.93 Aligned_cols=325 Identities=14% Similarity=0.101 Sum_probs=203.0
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCc
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~ 190 (953)
+..++|||||++|+|.... .+. .+||++++.+ ++.++++... ...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~------------------------~g~------~~l~~~d~~~----~~~~~l~~~~-~~~ 82 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF------------------------DGN------RNYYLLNLET----QQAVQLTEGK-GDN 82 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT------------------------TSS------CEEEEEETTT----TEEEECCCSS-CBC
T ss_pred eecCcCCCCCCEEEEEEec------------------------CCC------ceEEEEECCC----CcEEEeecCC-CCc
Confidence 5688999999999999863 122 2689999843 4555554321 112
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
...+.|||||++|+|... ..+||++++++++.++++..+. .|+++|+.|+|........
T Consensus 83 ~~~~~~spdg~~l~~~~~---------~~~l~~~d~~~~~~~~~~~~~~----------~~~~~g~~l~~~~~~~~~~-- 141 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKN---------ELNLMKVDLETLEEQVIYTVDE----------EWKGYGTWVANSDCTKLVG-- 141 (396)
T ss_dssp TTTCEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECCT----------TEEEEEEEEECTTSSEEEE--
T ss_pred cccceECCCCCEEEEEEc---------CCcEEEEECCCCCcEEEEeccc----------ccCCCCCEEEeccCCcccc--
Confidence 334899999999999873 3379999999999888865443 1889999888752110000
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhh------hccceEEEEEc-CCceeEeCCC-CcccccccCC-
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDY------YATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSP- 341 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~Sp- 341 (953)
++.. ......++..+.+ .....|+++|+ +|+.+.+... ..+..+.|||
T Consensus 142 ----------~~~~-------------~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~ 198 (396)
T 3c5m_A 142 ----------IEIL-------------KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPF 198 (396)
T ss_dssp ----------EEEE-------------GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred ----------cccc-------------ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCC
Confidence 0000 0000111111111 13468999999 8887777654 5677899999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~ 421 (953)
||++|+|.+... . ......|++++++++..+.+...... ..+..++|||||+.|+|......
T Consensus 199 dg~~l~~~~~~~-~------~~~~~~l~~~d~~~~~~~~l~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~~ 260 (396)
T 3c5m_A 199 DDSTVGFCHEGP-H------DLVDARMWLVNEDGSNVRKIKEHAEG-----------ESCTHEFWIPDGSAMAYVSYFKG 260 (396)
T ss_dssp EEEEEEEEECSC-S------SSCSCCCEEEETTSCCCEESSCCCTT-----------EEEEEEEECTTSSCEEEEEEETT
T ss_pred CCCEEEEEecCC-C------CCCCceEEEEECCCCceeEeeccCCC-----------ccccceEECCCCCEEEEEecCCC
Confidence 899999997421 1 11124799999988776766542100 12346899999999988743221
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeecc-CCceEEEEEec------------ccCceEEEEEcC
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCD-DSLALVYESWY------------KTRRTRTWVISP 488 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~Sp-Dg~~l~~~~~~------------~~~~~~l~~~d~ 488 (953)
.....|+++|+ .+++.+.+...... . +.||| ||+.|++.... ......||++++
T Consensus 261 --------~~~~~l~~~d~---~~g~~~~l~~~~~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 261 --------QTDRVIYKANP---ETLENEEVMVMPPC-S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp --------TCCEEEEEECT---TTCCEEEEEECCSE-E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred --------CccceEEEEEC---CCCCeEEeeeCCCC-C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 11234999996 56666666544332 2 89999 99988775421 112358999999
Q ss_pred CCCCCCcEEeecCCCcc------ccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002209 489 GSKDVAPRILFDRSSED------VYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (953)
Q Consensus 489 ~~~~~~~~~~~~~~~~~------~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~ 562 (953)
+++ +...++...... .+.. ...+.|||||++|+|..... ....||++|++++
T Consensus 328 ~~~--~~~~l~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~s~~~------------------~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 328 KAK--SAQKLCKHSTSWDVLDGDRQIT--HPHPSFTPNDDGVLFTSDFE------------------GVPAIYIADVPES 385 (396)
T ss_dssp TTT--BCCEEEECCCCCCCBTTBSSTT--CCCCEECTTSSEEEEEECTT------------------SSCEEEEEECCTT
T ss_pred ccC--ceEEccCCCCccccccccccCC--CCCceEccCCCeEEEEecCC------------------CCceEEEEEEccc
Confidence 875 344454432210 0000 11157999999999987321 2456999999888
Q ss_pred ceEEE
Q 002209 563 SKERI 567 (953)
Q Consensus 563 ~~~~l 567 (953)
+.+.+
T Consensus 386 ~~~~~ 390 (396)
T 3c5m_A 386 YKHLE 390 (396)
T ss_dssp CC---
T ss_pred ccccc
Confidence 76654
No 21
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=5.8e-21 Score=234.17 Aligned_cols=332 Identities=13% Similarity=0.147 Sum_probs=212.7
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc------------------c--ccccc
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL------------------N--AIFDN 248 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~------------------~--~~~~~ 248 (953)
..+..++|||||++|+|....+ .++....||++|+++|+.++++....... . ..+..
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d---~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKD---SDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCS---SCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCceEecCCCEEEEEeccC---CCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 3578899999999999987411 12235689999999999887765432100 0 11568
Q ss_pred eEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC---c
Q 002209 249 FVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---T 324 (953)
Q Consensus 249 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g---~ 324 (953)
++|||||+.|++. ....|+++++ +| +
T Consensus 114 ~~~SpDg~~l~~~--------------------------------------------------~~~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 114 YQWSPDAQRLLFP--------------------------------------------------LGGELYLYDLKQEGKAA 143 (741)
T ss_dssp CEECTTSSEEEEE--------------------------------------------------ETTEEEEEESSSCSTTS
T ss_pred eEECCCCCEEEEE--------------------------------------------------eCCcEEEEECCCCCcce
Confidence 9999999999987 1257999999 77 7
Q ss_pred eeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcc---cCCccccc-ccc
Q 002209 325 VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE---DIPIAFNS-VRK 399 (953)
Q Consensus 325 ~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~---~~p~~~~~-~~~ 399 (953)
.+.++.. ..+..++|||||++|+|.+. .+|++||+++++.+.++...... ..+.+... ...
T Consensus 144 ~~~l~~~~~~~~~~~~SPDG~~la~~~~--------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~ 209 (741)
T 2ecf_A 144 VRQLTHGEGFATDAKLSPKGGFVSFIRG--------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMD 209 (741)
T ss_dssp CCBCCCSSSCEEEEEECTTSSEEEEEET--------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSC
T ss_pred EEEcccCCcccccccCCCCCCEEEEEeC--------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccc
Confidence 7777766 67889999999999999972 28999999988888776543210 00000000 011
Q ss_pred CccceeeccCCCCceEEEEeccCCCc----------------c----cccccCCeEEEEecCCCCC-CCceEEee---cc
Q 002209 400 GMRSINWRSDKPSTLYWAETQDGGDA----------------K----VEVTPRDIIYTQQAEPVQG-EGPEILHK---LD 455 (953)
Q Consensus 400 ~~~~~~wspDg~~i~~~~~~~~~~~~----------------~----~~~~~~~~l~~~d~~~~~g-~~~~~l~~---~~ 455 (953)
.+..++|||||+.|+|.......... . ........|+++|+ ++ ++.+.+.. ..
T Consensus 210 ~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~ 286 (741)
T 2ecf_A 210 RHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---AEQAQTQWIDLGKEQD 286 (741)
T ss_dssp CCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---STTCCCEEECCCSCSS
T ss_pred cccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---CCCCceEEecCCCCcc
Confidence 24679999999999998332110000 0 00011237889986 55 66665542 33
Q ss_pred cccCCeeeccCCceEEEEEe-cccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCC
Q 002209 456 LRYGGISWCDDSLALVYESW-YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDE 534 (953)
Q Consensus 456 ~~~~~~~~SpDg~~l~~~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~ 534 (953)
..+..++| |||++|++... .......|+++|+.++ +...+........... ...+.|||||+ +++.....
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~--~~~~~~spdg~-~~~~~~~~--- 357 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWVPL--HNSLRFLDDGS-ILWSSERT--- 357 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCCCC--CSCCEECTTSC-EEEEECTT---
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcCCc--CCceEECCCCe-EEEEecCC---
Confidence 45667999 99999998875 3334568999999886 3344433221110000 00167999999 44443211
Q ss_pred CcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCC-CceEEE
Q 002209 535 GTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTE-NTQYYI 613 (953)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-p~~l~~ 613 (953)
...+||.+|++++ .+.|+..+.. +... ..||+||+.+++....... ...||.
T Consensus 358 ---------------g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~------~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 358 ---------------GFQHLYRIDSKGK-AAALTHGNWS-----VDEL------LAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp ---------------SSCEEEEECSSSC-EEESCCSSSC-----EEEE------EEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred ---------------CccEEEEEcCCCC-eeeeeecceE-----EEeE------eEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 2346999998777 7777766543 1111 2489999998887764431 345788
Q ss_pred EECCCCCeeEEec
Q 002209 614 QSWPDKKSCQITD 626 (953)
Q Consensus 614 ~~~~~g~~~~Lt~ 626 (953)
++..++..++|+.
T Consensus 411 ~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 411 VPLQGGQPQRLSK 423 (741)
T ss_dssp EETTCCCCEECCC
T ss_pred EEcCCCCeeeccc
Confidence 8766665677764
No 22
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.88 E-value=1.3e-21 Score=219.53 Aligned_cols=231 Identities=19% Similarity=0.143 Sum_probs=174.2
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
...+.++++. +|.+|++++++|++. ++.|+||++||+... ... .......|+++||+|+
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~-----~~~P~vl~~hG~~~~--------------~~~-~~~~~~~l~~~G~~v~ 183 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP-----GPHPAVIMLGGLEST--------------KEE-SFQMENLVLDRGMATA 183 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS-----CCEEEEEEECCSSCC--------------TTT-THHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC-----CCCCEEEEeCCCCcc--------------HHH-HHHHHHHHHhCCCEEE
Confidence 5678899887 899999999999862 358999999985311 001 1233667889999999
Q ss_pred EcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
.+++ +|+|.+............++.+++++|.+++.+|.++++|+|+|+||++++.++.+ |++|+++|++ |+.+.
T Consensus 184 ~~d~---rG~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~ 258 (386)
T 2jbw_A 184 TFDG---PGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSD 258 (386)
T ss_dssp EECC---TTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSC
T ss_pred EECC---CCCCCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCCh
Confidence 9655 56666522211223344567888999999888899999999999999999999999 7899999999 88775
Q ss_pred CCCCcCccc----------ccchhhhhH-HHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHH-HhCCCc
Q 002209 797 TLTPFGFQN----------EDRTLWEAT-STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNAL-KGHGAL 864 (953)
Q Consensus 797 ~~~~~~~~~----------~~~~~~~~~-~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l-~~~g~~ 864 (953)
......+.. ....+++.. ..+..+++...+.++++|+|++||++|. |+ +.++.++++++ +. +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~--~~~~~~l~~~l~~~---~ 332 (386)
T 2jbw_A 259 LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPAE---H 332 (386)
T ss_dssp STTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCGG---G
T ss_pred HHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CC--HHHHHHHHHHhcCC---C
Confidence 322110000 001122233 5566778888899999999999999999 98 99999999988 64 5
Q ss_pred EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccCC
Q 002209 865 CRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 865 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
++++++++++|.+ .++...+.+.+.+||+++++..
T Consensus 333 ~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 333 LNLVVEKDGDHCC--HNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEEEEETTCCGGG--GGGTTHHHHHHHHHHHHHHTSS
T ss_pred cEEEEeCCCCcCC--ccchHHHHHHHHHHHHHhcCCc
Confidence 8999999999975 4456688899999999999754
No 23
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.88 E-value=6.4e-22 Score=211.03 Aligned_cols=237 Identities=15% Similarity=0.124 Sum_probs=170.0
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCC
Q 002209 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (953)
Q Consensus 642 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~ 721 (953)
.++...+|..+.+++..|....+ .++.|+||++|||.+.... .......+..|+++||.|+.++++
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~--~~~~p~vv~~HGgg~~~~~------------~~~~~~~~~~l~~~G~~v~~~d~~ 82 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNE--NYTFPAIIICPGGGYQHIS------------QRESDPLALAFLAQGYQVLLLNYT 82 (276)
T ss_dssp EECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTSCC------------GGGSHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCCeEEEEEEeCCccccc--CCCCCEEEEEcCCccccCC------------chhhHHHHHHHHHCCCEEEEecCc
Confidence 34566788888876655543111 2458999999997432211 111234566788999999996664
Q ss_pred CCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-CCCcccEEEEcccCCCCC
Q 002209 722 PIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRT 797 (953)
Q Consensus 722 ~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~d~~ 797 (953)
|+|.+... ..+...+.|+.++++++.+.. .+|+++|+|+||||||.+++.++.+ .+.+++++|+.+|+.+..
T Consensus 83 ---g~g~s~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~ 158 (276)
T 3hxk_A 83 ---VMNKGTNY-NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFT 158 (276)
T ss_dssp ---CTTSCCCS-CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTT
T ss_pred ---cCCCcCCC-CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHH
Confidence 55543221 224577889999999998863 3788999999999999999999988 678999999999987633
Q ss_pred CCCcCccc-ccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCcc
Q 002209 798 LTPFGFQN-EDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHG 876 (953)
Q Consensus 798 ~~~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 876 (953)
.. +.... ......+. . ...++...+.++++|+|++||++|..|| +.++.+++++++..+.+++++++++++|.
T Consensus 159 ~~-~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 232 (276)
T 3hxk_A 159 FG-WPSDLSHFNFEIEN--I-SEYNISEKVTSSTPPTFIWHTADDEGVP--IYNSLKYCDRLSKHQVPFEAHFFESGPHG 232 (276)
T ss_dssp SS-CSSSSSSSCCCCSC--C-GGGBTTTTCCTTSCCEEEEEETTCSSSC--THHHHHHHHHHHTTTCCEEEEEESCCCTT
T ss_pred hh-CCcchhhhhcCchh--h-hhCChhhccccCCCCEEEEecCCCceeC--hHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 22 11000 00011111 1 4456777888899999999999999999 99999999999999999999999999998
Q ss_pred CCCcc------------cHHHHHHHHHHHHHHhccCCC
Q 002209 877 YAARE------------SIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 877 ~~~~~------------~~~~~~~~i~~fl~~~l~~~~ 902 (953)
+.... ....+.+.+.+||+++.+..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~ 270 (276)
T 3hxk_A 233 VSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNLE 270 (276)
T ss_dssp CTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC
T ss_pred ccccCccccccccccCchHHHHHHHHHHHHHhCccccc
Confidence 75322 346788889999999876543
No 24
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.88 E-value=8.4e-22 Score=207.53 Aligned_cols=230 Identities=13% Similarity=0.080 Sum_probs=149.3
Q ss_pred CCCCeeEEecCCCCCCCcCCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCC
Q 002209 617 PDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNE 696 (953)
Q Consensus 617 ~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~ 696 (953)
..|+.+..+..+........++.+.+++ ..||.+|++++|+|++ ..+.|+||++||++.. .
T Consensus 9 ~~~~~r~~~~~~~~~~~~~~~~e~~~~~-~~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~-------------~ 69 (259)
T 4ao6_A 9 HHGSMRHQMSWNGKDERKLSVQERGFSL-EVDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTH-------------K 69 (259)
T ss_dssp --------CEECSCCEEETTEEEEEEEE-EETTEEEEEEEEEESS-----SCCSEEEEEEC-------------------
T ss_pred ccCcceeeeccCCCccccCCceEEEEEE-eeCCeEEEEEEEeCCC-----CCCCCEEEEeCCCccc-------------c
Confidence 3555555554443222222233334544 4699999999999976 3458999999997421 1
Q ss_pred CCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---------------------hhhHHHHHHHHHHHHHHHHHcCC
Q 002209 697 FPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---------------------DRFVEQLVACAEAAVEEVVRRGV 755 (953)
Q Consensus 697 ~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---------------------~~~~~~~~~D~~~~~~~l~~~~~ 755 (953)
........++.|+++||+|+.+|++ |+|.+... .......+.|..++++++...
T Consensus 70 ~~~~~~~~a~~la~~Gy~Vl~~D~r---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~-- 144 (259)
T 4ao6_A 70 KVEYIEQVAKLLVGRGISAMAIDGP---GHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE-- 144 (259)
T ss_dssp --CHHHHHHHHHHHTTEEEEEECCC---C-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--
T ss_pred cchHHHHHHHHHHHCCCeEEeeccC---CCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--
Confidence 1111234567899999999996664 44433110 111234567888889888654
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEE
Q 002209 756 AHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILL 835 (953)
Q Consensus 756 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li 835 (953)
+|+++|+++|+|+||++++.+++..| +++|+|+..+.... . ...++...+.+|++|+|+
T Consensus 145 ~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~------------~--------~~~~~~~~a~~i~~P~Li 203 (259)
T 4ao6_A 145 EGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEG------------V--------NGEDLVRLAPQVTCPVRY 203 (259)
T ss_dssp HCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTS------------T--------THHHHHHHGGGCCSCEEE
T ss_pred cCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEecccccc------------c--------cccchhhhhccCCCCEEE
Confidence 67889999999999999999999996 47777665443210 0 011344566789999999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 836 ~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+||++|.+|| ++++.++|+++.. .+++++++|+ +|... ...+..+.+++||++||+
T Consensus 204 ~hG~~D~~vp--~~~~~~l~~al~~--~~k~l~~~~G-~H~~~---p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 204 LLQWDDELVS--LQSGLELFGKLGT--KQKTLHVNPG-KHSAV---PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEESS-CTTCC---CHHHHTHHHHHHHHHHCC
T ss_pred EecCCCCCCC--HHHHHHHHHHhCC--CCeEEEEeCC-CCCCc---CHHHHHHHHHHHHHHhcC
Confidence 9999999999 9999999999853 4578889998 56432 234667889999999985
No 25
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=4.7e-21 Score=216.95 Aligned_cols=256 Identities=15% Similarity=0.134 Sum_probs=185.8
Q ss_pred CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCC
Q 002209 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLG 278 (953)
Q Consensus 199 DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 278 (953)
.+++|+|..... .+.....|+++|++++..+.++.+... +..++|||||+.|++...+.
T Consensus 142 ~~~~l~~~s~~~---~~~~~~~i~i~d~~g~~~~~l~~~~~~-----v~~~~~Spdg~~la~~s~~~------------- 200 (415)
T 2hqs_A 142 FRTRIAYVVQTN---GGQFPYELRVSDYDGYNQFVVHRSPQP-----LMSPAWSPDGSKLAYVTFES------------- 200 (415)
T ss_dssp TTCEEEEEEECS---SSSCCEEEEEEETTSCSCEEEEEESSC-----EEEEEECTTSSEEEEEECTT-------------
T ss_pred CCCEEEEEEecC---CCCccceEEEEcCCCCCCEEEeCCCCc-----ceeeEEcCCCCEEEEEEecC-------------
Confidence 488999987521 111127999999998888888765442 67899999999999872110
Q ss_pred CceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCcc
Q 002209 279 PKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYS 356 (953)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~ 356 (953)
+...|+++|+ +|+.+.+... ..+..++|||||++|+|+....
T Consensus 201 ---------------------------------~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~--- 244 (415)
T 2hqs_A 201 ---------------------------------GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT--- 244 (415)
T ss_dssp ---------------------------------SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT---
T ss_pred ---------------------------------CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC---
Confidence 2357899999 8888777765 6778999999999999887432
Q ss_pred ccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEE
Q 002209 357 FIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIY 436 (953)
Q Consensus 357 ~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~ 436 (953)
...+|++||+++++.+.++... ..+..++|||||+.|++.... +....||
T Consensus 245 -------g~~~i~~~d~~~~~~~~l~~~~-------------~~~~~~~~spdg~~l~~~s~~----------~g~~~i~ 294 (415)
T 2hqs_A 245 -------GSLNLYVMDLASGQIRQVTDGR-------------SNNTEPTWFPDSQNLAFTSDQ----------AGRPQVY 294 (415)
T ss_dssp -------SSCEEEEEETTTCCEEECCCCS-------------SCEEEEEECTTSSEEEEEECT----------TSSCEEE
T ss_pred -------CCceEEEEECCCCCEEeCcCCC-------------CcccceEECCCCCEEEEEECC----------CCCcEEE
Confidence 1237999999987777776543 123578999999999887311 2234899
Q ss_pred EEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeE
Q 002209 437 TQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMR 516 (953)
Q Consensus 437 ~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 516 (953)
++++ .+++.+.++.....+..++|||||++|++....++ ...|++++++++ +...+.... .+.. +.
T Consensus 295 ~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g-~~~i~~~d~~~~--~~~~l~~~~--~~~~------~~ 360 (415)
T 2hqs_A 295 KVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDLATG--GVQVLSSTF--LDET------PS 360 (415)
T ss_dssp EEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSS-CEEEEEEETTTC--CEEECCCSS--SCEE------EE
T ss_pred EEEC---CCCCEEEEecCCCcccCeEECCCCCEEEEEECcCC-ceEEEEEECCCC--CEEEecCCC--CcCC------eE
Confidence 9996 66666677666566677999999999999876543 358999999885 334444322 2222 78
Q ss_pred eccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcc
Q 002209 517 RTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (953)
Q Consensus 517 ~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~ 573 (953)
|+|||++|++...+. ....||+||++++..++|+...+.
T Consensus 361 ~spdg~~l~~~s~~~------------------~~~~l~~~d~~g~~~~~l~~~~~~ 399 (415)
T 2hqs_A 361 LAPNGTMVIYSSSQG------------------MGSVLNLVSTDGRFKARLPATDGQ 399 (415)
T ss_dssp ECTTSSEEEEEEEET------------------TEEEEEEEETTSCCEEECCCSSSE
T ss_pred EcCCCCEEEEEEcCC------------------CccEEEEEECCCCcEEEeeCCCCC
Confidence 999999999987432 133599999999888888776654
No 26
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=7e-21 Score=241.80 Aligned_cols=273 Identities=8% Similarity=-0.006 Sum_probs=191.1
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..|.|+|| .|+|+.. .++...||.++++++..++++.... +..+.|||||+.|++.
T Consensus 205 ~v~~~~~s~d--~l~~~~~------~dg~~~l~~~~~~g~~~~~l~~~~~------~~~~~~SpDG~~la~~-------- 262 (1045)
T 1k32_A 205 HVSSPVIVGH--RIYFITD------IDGFGQIYSTDLDGKDLRKHTSFTD------YYPRHLNTDGRRILFS-------- 262 (1045)
T ss_dssp CCEEEEEETT--EEEEEEC------TTSSCEEEEEETTSCSCEECCCCCS------SCEEEEEESSSCEEEE--------
T ss_pred cccceEEeCC--EEEEEEe------ccCceEEEEEeCCCCcceEecCCCC------cceeeEcCCCCEEEEE--------
Confidence 4556778876 7777653 4467899999998888888876553 4467999999999987
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC------------Ccccc
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------------AVYTS 336 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~------------~~~~~ 336 (953)
....||++++ .+....+... ..+..
T Consensus 263 ------------------------------------------~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~ 300 (1045)
T 1k32_A 263 ------------------------------------------KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFA 300 (1045)
T ss_dssp ------------------------------------------ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGE
T ss_pred ------------------------------------------eCCEEEEecCCceEeeeeccCcccccccccccccccce
Confidence 1245667776 4444444331 25788
Q ss_pred cccC-CCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 337 LDPS-PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 337 ~~~S-pDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
++|| |||++|++.+ + .++++|++.++..+.+..... ..+..++|| ||+.++|
T Consensus 301 ~~~S~pdG~~la~~~-~-------------~~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~s-dg~~l~~ 353 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-R-------------GQAFIQDVSGTYVLKVPEPLR------------IRYVRRGGD-TKVAFIH 353 (1045)
T ss_dssp EEEEECGGGCEEEEE-T-------------TEEEEECTTSSBEEECSCCSC------------EEEEEECSS-SEEEEEE
T ss_pred eeecCCCCCEEEEEE-c-------------CEEEEEcCCCCceEEccCCCc------------ceEEeeeEc-CCCeEEE
Confidence 9999 9999999987 2 289999998877776654321 134578999 9999988
Q ss_pred EEEeccCCCcccccccCCeEE-EEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCC
Q 002209 416 WAETQDGGDAKVEVTPRDIIY-TQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA 494 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~-~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~ 494 (953)
. +....+| ++++ ++++.+.++.....+..++|||||++|++...+. .|+++|+.++ +
T Consensus 354 ~-------------s~~~~l~~~~d~---~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~----~v~~~d~~tg--~ 411 (1045)
T 1k32_A 354 G-------------TREGDFLGIYDY---RTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRF----EIMTVDLETG--K 411 (1045)
T ss_dssp E-------------ETTEEEEEEEET---TTCCEEECCCCCCSEEEEEECTTSSEEEEEETTS----EEEEEETTTC--C
T ss_pred E-------------ECCCceEEEEEC---CCCCceEecCCccceeeeEECCCCCEEEEECCCC----eEEEEECCCC--c
Confidence 7 2245788 8986 6667677765556677899999999999886543 7899999885 4
Q ss_pred cEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCccc
Q 002209 495 PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEK 574 (953)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~ 574 (953)
...+.......+.. ++|||||++|++.....+ ..........|++||+++++...++.....
T Consensus 412 ~~~~~~~~~~~v~~------~~~SpDG~~la~~~~~~~-----------~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~- 473 (1045)
T 1k32_A 412 PTVIERSREAMITD------FTISDNSRFIAYGFPLKH-----------GETDGYVMQAIHVYDMEGRKIFAATTENSH- 473 (1045)
T ss_dssp EEEEEECSSSCCCC------EEECTTSCEEEEEEEECS-----------STTCSCCEEEEEEEETTTTEEEECSCSSSB-
T ss_pred eEEeccCCCCCccc------eEECCCCCeEEEEecCcc-----------ccccCCCCCeEEEEECCCCcEEEeeCCCcc-
Confidence 44554333322222 889999999998874320 000001234699999999987777665432
Q ss_pred ceeeeEeeccCCccccccccCCEEEEEEec
Q 002209 575 YYETTVALMSDQTEGDLYLNQLKILTSKES 604 (953)
Q Consensus 575 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 604 (953)
. ..+.|+|||+.+++....
T Consensus 474 ----~-------~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 474 ----D-------YAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp ----E-------EEEEECTTSCEEEEEESC
T ss_pred ----c-------CCceEcCCCCEEEEEecc
Confidence 1 125799999999887654
No 27
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=2.3e-21 Score=236.82 Aligned_cols=349 Identities=14% Similarity=0.073 Sum_probs=210.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCce---eeeecCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE---IEIQGFP 186 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~---~~l~~~~ 186 (953)
.+..++|||||++|||.+.. . +..+-+..+.|++||+.+ ++. +++ +
T Consensus 61 ~~~~~~~SpDg~~la~~~~~-----------------------~-~~~~~s~~~~i~~~d~~~----g~~~~~~~l---~ 109 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDY-----------------------S-KLWRYSYTATYYIYDLSN----GEFVRGNEL---P 109 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEE-----------------------E-ECSSSCEEEEEEEEETTT----TEECCSSCC---C
T ss_pred ceeeEEECCCCCeEEEEecC-----------------------c-eeEEeecceEEEEEECCC----Cccccceec---C
Confidence 36789999999999998863 0 111112235899999853 333 333 2
Q ss_pred CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcc--cc------------ccccceEEe
Q 002209 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY--LN------------AIFDNFVWV 252 (953)
Q Consensus 187 ~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~--~~------------~~~~~~~ws 252 (953)
..+..++|||||++|||.. ..+||++++++|+.++++..+... .+ .....+.||
T Consensus 110 --~~~~~~~~SPDG~~la~~~----------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 110 --RPIQYLCWSPVGSKLAYVY----------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp --SSBCCEEECSSTTCEEEEE----------TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred --cccccceECCCCCEEEEEE----------CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 2478899999999999975 348999999999988887544211 00 001479999
Q ss_pred cCCeEEEEEecCCCCCCCC---CCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce---
Q 002209 253 NNSTLLVCTIPLLRGDPPK---KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--- 325 (953)
Q Consensus 253 pDg~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~--- 325 (953)
|||+.|++...+....... ....+.-+... .+..+..+.. .....|+++|+ +++.
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~---------------~~~yp~~g~~---~~~~~l~~~d~~~~~~~~~ 239 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI---------------NIPYPKAGAK---NPVVRIFIIDTTYPAYVGP 239 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE---------------EEECCBTTSC---CCEEEEEEEESSCHHHHCC
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccce---------------eecCCCCCCC---CCeeEEEEEECCCCCccce
Confidence 9999999985432211000 00000000000 0000100000 03357999999 6654
Q ss_pred eEeCC------C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEe----ccCceEEEecc---CCCcccCC
Q 002209 326 KEIGP------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWT----TDGIFVRELCD---LPLAEDIP 391 (953)
Q Consensus 326 ~~l~~------~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d----~~g~~~~~l~~---~~~~~~~p 391 (953)
..+.. . ..+..++|||||+ +++....... ....|++|| +++++.+.+.. .....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~--------~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~--- 307 (719)
T 1z68_A 240 QEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQ--------NVSVLSICDFREDWQTWDCPKTQEHIEESRTG--- 307 (719)
T ss_dssp EECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESST--------TEEEEEEEEECSSSSSEECCGGGEEEEECSSS---
T ss_pred eEccCCccCCCCcceEEEeEEeCCCe-EEEEEecccc--------CeEEEEEEcccCCCCCCceEEEEecccccCCc---
Confidence 24432 2 4567899999976 4444322210 123699999 77776665542 10000
Q ss_pred ccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEE
Q 002209 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALV 471 (953)
Q Consensus 392 ~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~ 471 (953)
+... .....+.|||||+.++|+.... ++..+|+++++ ++++.+.++.+...+..+.++ ||+.|+
T Consensus 308 -~~~~--~~~~~~~~spdg~~l~~~~~~~---------~g~~~l~~~~~---~~~~~~~lt~~~~~v~~~~~~-d~~~i~ 371 (719)
T 1z68_A 308 -WAGG--FFVSTPVFSYDAISYYKIFSDK---------DGYKHIHYIKD---TVENAIQITSGKWEAINIFRV-TQDSLF 371 (719)
T ss_dssp -CSSS--SSCCCCEECTTSSCEEEEEECT---------TSCEEEEEESS---CSTTCEECSCSSSCEEEEEEE-CSSEEE
T ss_pred -eEcc--ccCCccEECCCCCeEEEEEEcc---------CCceEEEEEEC---CCCceEecccCceEEEEEEEE-eCCEEE
Confidence 0000 0012688999999988863332 23558999986 667778888777767777777 999999
Q ss_pred EEEec--c-cCceEEEEEcCCCCCCCcEEeecC---CCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCC
Q 002209 472 YESWY--K-TRRTRTWVISPGSKDVAPRILFDR---SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (953)
Q Consensus 472 ~~~~~--~-~~~~~l~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (953)
|.+.. + ....+||.++.+++..+...++.. ....+.. ++|||||+++++.....
T Consensus 372 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~------~~~s~dg~~l~~~~s~~-------------- 431 (719)
T 1z68_A 372 YSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYT------ASFSDYAKYYALVCYGP-------------- 431 (719)
T ss_dssp EEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEE------EEECGGGSSEEEEECCB--------------
T ss_pred EEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEE------EEECCCCCEEEEEcCCC--------------
Confidence 98865 1 234589999986642223444321 1111111 67999999998876322
Q ss_pred CCCCCCCeEEEEECCCCceEEEeccC
Q 002209 546 TPEGNIPFLDLFDINTGSKERIWESD 571 (953)
Q Consensus 546 ~~~~~~~~L~~~d~~~~~~~~l~~~~ 571 (953)
+.+.+++||+++++..+++...
T Consensus 432 ----~~p~~~l~d~~~g~~~~~~~~~ 453 (719)
T 1z68_A 432 ----GIPISTLHDGRTDQEIKILEEN 453 (719)
T ss_dssp ----SSCEEEEECSSSCCEEEEEECC
T ss_pred ----CCCeEEEEECCCCCEEEEeecc
Confidence 2345889999888877776543
No 28
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=1.3e-20 Score=213.21 Aligned_cols=249 Identities=14% Similarity=0.107 Sum_probs=180.0
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc
Q 002209 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (953)
Q Consensus 163 ~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (953)
..|++||+. | ...+.++... ..+..++|||||++|+|... .++...|+++|+++|+.++++.....
T Consensus 159 ~~i~i~d~~--g--~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~------~~~~~~i~~~d~~tg~~~~l~~~~~~-- 224 (415)
T 2hqs_A 159 YELRVSDYD--G--YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTF------ESGRSALVIQTLANGAVRQVASFPRH-- 224 (415)
T ss_dssp EEEEEEETT--S--CSCEEEEEES--SCEEEEEECTTSSEEEEEEC------TTSSCEEEEEETTTCCEEEEECCSSC--
T ss_pred ceEEEEcCC--C--CCCEEEeCCC--CcceeeEEcCCCCEEEEEEe------cCCCcEEEEEECCCCcEEEeecCCCc--
Confidence 378999983 3 4455665433 46889999999999999774 33457999999999998887765442
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-
Q 002209 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (953)
Q Consensus 243 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~- 321 (953)
+..++|+|||+.|+++... + +..+||++|+
T Consensus 225 ---~~~~~~spdg~~la~~~~~---------------------------------------~-------g~~~i~~~d~~ 255 (415)
T 2hqs_A 225 ---NGAPAFSPDGSKLAFALSK---------------------------------------T-------GSLNLYVMDLA 255 (415)
T ss_dssp ---EEEEEECTTSSEEEEEECT---------------------------------------T-------SSCEEEEEETT
T ss_pred ---ccCEEEcCCCCEEEEEEec---------------------------------------C-------CCceEEEEECC
Confidence 6689999999999977210 1 3357999999
Q ss_pred CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccC
Q 002209 322 DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (953)
Q Consensus 322 ~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (953)
+++.+.++.. ..+..++|||||++|++.+.+. ....|++||+++++.+.++... ..
T Consensus 256 ~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~----------g~~~i~~~d~~~~~~~~l~~~~-------------~~ 312 (415)
T 2hqs_A 256 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA----------GRPQVYKVNINGGAPQRITWEG-------------SQ 312 (415)
T ss_dssp TCCEEECCCCSSCEEEEEECTTSSEEEEEECTT----------SSCEEEEEETTSSCCEECCCSS-------------SE
T ss_pred CCCEEeCcCCCCcccceEECCCCCEEEEEECCC----------CCcEEEEEECCCCCEEEEecCC-------------Cc
Confidence 8888888776 6778999999999999998432 1237999999987766665432 12
Q ss_pred ccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCc
Q 002209 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (953)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 480 (953)
+..++|||||+.|++.... .....|+++++ .+++.+.++... .+..++|||||+.|++.+..++ .
T Consensus 313 ~~~~~~spdG~~l~~~~~~----------~g~~~i~~~d~---~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~ 377 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSN----------GGQQHIAKQDL---ATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-G 377 (415)
T ss_dssp EEEEEECTTSSEEEEEEEC----------SSCEEEEEEET---TTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETT-E
T ss_pred ccCeEECCCCCEEEEEECc----------CCceEEEEEEC---CCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-c
Confidence 3468999999988887221 12457999996 666666666554 6678999999999999876553 3
Q ss_pred eEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCC
Q 002209 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTG 521 (953)
Q Consensus 481 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG 521 (953)
..||+++++++ ....++.. ...+.. ++|||--
T Consensus 378 ~~l~~~d~~g~--~~~~l~~~-~~~v~~------~~~~~~~ 409 (415)
T 2hqs_A 378 SVLNLVSTDGR--FKARLPAT-DGQVKF------PAWSPYL 409 (415)
T ss_dssp EEEEEEETTSC--CEEECCCS-SSEEEE------EEECCCC
T ss_pred cEEEEEECCCC--cEEEeeCC-CCCCcC------Ccccccc
Confidence 58999999874 34444332 222333 6788754
No 29
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=2.7e-20 Score=226.76 Aligned_cols=333 Identities=13% Similarity=0.122 Sum_probs=212.1
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCC
Q 002209 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (953)
Q Consensus 109 ~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~ 188 (953)
..+..++|||| ++++|..+. .|++||+.+ ++.++++.. .
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~----------------------------------~i~~~d~~~----~~~~~l~~~--~ 120 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQG----------------------------------GLVGFDMLA----RKVTYLFDT--N 120 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETT----------------------------------EEEEEETTT----TEEEEEECC--T
T ss_pred cCceeEEECCC-CeEEEEECC----------------------------------EEEEEECCC----CceEEccCC--c
Confidence 35778999999 888888653 789999854 455555532 2
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCC-----CceeecccCCCccc-cc---------cccceEEec
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-----GKARPLFQSPDIYL-NA---------IFDNFVWVN 253 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~-----g~~~~lt~~~~~~~-~~---------~~~~~~wsp 253 (953)
..+..++|||||++|+|.. ..+||++++++ |+.++++....... ++ .+..+.|||
T Consensus 121 ~~~~~~~~SpdG~~la~~~----------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp 190 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYVR----------NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP 190 (706)
T ss_dssp TCCTTCEECTTSSEEEEEE----------TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT
T ss_pred ccccCCcCCCCCCEEEEEE----------CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC
Confidence 4688999999999999964 46899999999 88888876554210 00 025899999
Q ss_pred CCeEEEEEecCCCCCCCCC-C-CCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCC
Q 002209 254 NSTLLVCTIPLLRGDPPKK-P-LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP 330 (953)
Q Consensus 254 Dg~~l~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~ 330 (953)
||+.|++...+........ . .....+.... ......+. -....+|+++|+ +|+.+.+..
T Consensus 191 Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~---------------~~y~~~g~---~~~~~~l~~~d~~~~~~~~~~~ 252 (706)
T 2z3z_A 191 KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP---------------LYYPMAGT---PSHHVTVGIYHLATGKTVYLQT 252 (706)
T ss_dssp TSSEEEEEEEECTTSCCEEEEECCSSSCEEEE---------------ECCCBTTS---CCCEEEEEEEETTTTEEEECCC
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCceEE---------------eeCCCCCC---CCCeeEEEEEECCCCceEeecc
Confidence 9999998853222110000 0 0000000000 00000000 013467999999 887776653
Q ss_pred C----CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCc-eEEEeccCCCcccCCccccccccCcccee
Q 002209 331 P----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (953)
Q Consensus 331 ~----~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (953)
. ..+..++|||||++|++.+.+... ....|++||++++ ..+.+........ ......++
T Consensus 253 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~--------~~~~v~~~d~~~g~~~~~~~~~~~~~~--------~~~~~~~~ 316 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDENILYVAEVNRAQ--------NECKVNAYDAETGRFVRTLFVETDKHY--------VEPLHPLT 316 (706)
T ss_dssp CSCTTCEEEEEEECTTSSEEEEEEECTTS--------CEEEEEEEETTTCCEEEEEEEEECSSC--------CCCCSCCE
T ss_pred CCCCceeEeeEEEECCCCEEEEEEeCCCC--------CeeEEEEEECCCCceeeEEEEccCCCe--------ECccCCce
Confidence 2 456789999999999998754311 1238999999877 6665543211100 00124689
Q ss_pred ecc--CCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCC-eeeccCCceEEEEEeccc-Cce
Q 002209 406 WRS--DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGG-ISWCDDSLALVYESWYKT-RRT 481 (953)
Q Consensus 406 wsp--Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~-~~~SpDg~~l~~~~~~~~-~~~ 481 (953)
||| ||+ +++.. .. ++..+||.++. +++..+.++.+...+.. ++|||||+.|++....+. ...
T Consensus 317 ~sp~~dg~-~l~~~-~~---------~g~~~l~~~~~---~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 317 FLPGSNNQ-FIWQS-RR---------DGWNHLYLYDT---TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLER 382 (706)
T ss_dssp ECTTCSSE-EEEEE-CT---------TSSCEEEEEET---TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCB
T ss_pred eecCCCCE-EEEEE-cc---------CCccEEEEEEC---CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceE
Confidence 999 998 33431 11 23457888884 66666777777666655 799999999999876543 235
Q ss_pred EEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCC
Q 002209 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (953)
Q Consensus 482 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~ 561 (953)
+||.++++++ ....++.. ..+.. ++|||||+++++...+. ...+.|++||+++
T Consensus 383 ~l~~~d~~~~--~~~~l~~~--~~~~~------~~~spdg~~l~~~~~~~-----------------~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 383 HFYCIDIKGG--KTKDLTPE--SGMHR------TQLSPDGSAIIDIFQSP-----------------TVPRKVTVTNIGK 435 (706)
T ss_dssp EEEEEETTCC--CCEESCCS--SSEEE------EEECTTSSEEEEEEECS-----------------SCSCEEEEEESSS
T ss_pred EEEEEEcCCC--CceeccCC--CceEE------EEECCCCCEEEEEecCC-----------------CCCcEEEEEECCC
Confidence 8999999875 34444422 11222 78999999999886422 1234599999998
Q ss_pred CceEEE
Q 002209 562 GSKERI 567 (953)
Q Consensus 562 ~~~~~l 567 (953)
++.+.+
T Consensus 436 ~~~~~~ 441 (706)
T 2z3z_A 436 GSHTLL 441 (706)
T ss_dssp CEEEEE
T ss_pred CeEeec
Confidence 874333
No 30
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.87 E-value=6.1e-21 Score=214.81 Aligned_cols=326 Identities=12% Similarity=0.082 Sum_probs=202.1
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
+..++|||||++|+|... .++...||++++++++.++++...... ...+.|||||+.|+|..
T Consensus 38 ~~~~~~SpdG~~l~~~~~------~~g~~~l~~~d~~~~~~~~l~~~~~~~----~~~~~~spdg~~l~~~~-------- 99 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGD------FDGNRNYYLLNLETQQAVQLTEGKGDN----TFGGFISTDERAFFYVK-------- 99 (396)
T ss_dssp TTSCCBCTTSCEEEEEEC------TTSSCEEEEEETTTTEEEECCCSSCBC----TTTCEECTTSSEEEEEE--------
T ss_pred eecCcCCCCCCEEEEEEe------cCCCceEEEEECCCCcEEEeecCCCCc----cccceECCCCCEEEEEE--------
Confidence 678999999999999874 235678999999999998887655421 23488999999999871
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-Cc-ccc-----------
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AV-YTS----------- 336 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~-~~~----------- 336 (953)
...+||++++ +|+.+.+... .. ...
T Consensus 100 -----------------------------------------~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 138 (396)
T 3c5m_A 100 -----------------------------------------NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK 138 (396)
T ss_dssp -----------------------------------------TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred -----------------------------------------cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence 1136888998 7777666542 11 111
Q ss_pred --------cccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc
Q 002209 337 --------LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS 408 (953)
Q Consensus 337 --------~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp 408 (953)
+.|||||+++++.... .......|++||+++++.+.+.... ..+..+.|||
T Consensus 139 ~~~~~~~~~~~spdg~~~~~~~~~--------~~~~~~~l~~~d~~~g~~~~~~~~~-------------~~~~~~~~sp 197 (396)
T 3c5m_A 139 LVGIEILKRDWQPLTSWEKFAEFY--------HTNPTCRLIKVDIETGELEVIHQDT-------------AWLGHPIYRP 197 (396)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHH--------HTCCCEEEEEEETTTCCEEEEEEES-------------SCEEEEEEET
T ss_pred cccccccccccCCCCcceeeeeec--------cCCCcceEEEEECCCCcEEeeccCC-------------cccccceECC
Confidence 3455555555443210 0012348999999988777666422 1235689999
Q ss_pred -CCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec--ccccCCeeeccCCceEEEEEeccc-CceEEE
Q 002209 409 -DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWYKT-RRTRTW 484 (953)
Q Consensus 409 -Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~--~~~~~~~~~SpDg~~l~~~~~~~~-~~~~l~ 484 (953)
||+.|+|..+ +... .....|+++++ ++++.+.+... ...+..+.|||||++|+|...... ....|+
T Consensus 198 ~dg~~l~~~~~--~~~~-----~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 198 FDDSTVGFCHE--GPHD-----LVDARMWLVNE---DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp TEEEEEEEEEC--SCSS-----SCSCCCEEEET---TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEec--CCCC-----CCCceEEEEEC---CCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 8988888742 1100 11257899996 66666666553 234566899999999999876543 223599
Q ss_pred EEcCCCCCCCcEEeecCCCccccCCCCCCCeEecc-CCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCc
Q 002209 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (953)
Q Consensus 485 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~Sp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~ 563 (953)
++|+.++ +...+...... . +.||| ||+++++...+. + +.....+.........||+||+++++
T Consensus 268 ~~d~~~g--~~~~l~~~~~~-------~--~~~s~~dg~~l~~~~~~~--p---~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 268 KANPETL--ENEEVMVMPPC-------S--HLMSNFDGSLMVGDGCDA--P---VDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EECTTTC--CEEEEEECCSE-------E--EEEECSSSSEEEEEECCC---------------CCCCCCEEEEEETTTTB
T ss_pred EEECCCC--CeEEeeeCCCC-------C--CCccCCCCceEEEecCCc--c---eeeccccccccCCCCcEEEEecccCc
Confidence 9999875 34444432211 1 56999 999887754210 0 00000000001124579999999998
Q ss_pred eEEEeccCccc-ceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEe
Q 002209 564 KERIWESDKEK-YYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (953)
Q Consensus 564 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt 625 (953)
.++|+...... .+.. ........++|+|||+.+++..... ...++|.+++.+++.+.+.
T Consensus 332 ~~~l~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 332 AQKLCKHSTSWDVLDG--DRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp CCEEEECCCCCCCBTT--BSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTCC----
T ss_pred eEEccCCCCccccccc--cccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccccccccc
Confidence 88887654310 0000 0000122367999999998887654 4568999998888766544
No 31
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.87 E-value=8.6e-21 Score=210.14 Aligned_cols=245 Identities=14% Similarity=0.153 Sum_probs=166.0
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEc-CCCCC------------------CCCCCCccEEEEeCCCCCcCcCCCCcccCCC
Q 002209 634 LASLQKELIKYQRKDGVQLSATLYL-PPGYD------------------PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSP 694 (953)
Q Consensus 634 ~~~~~~~~~~~~~~dg~~~~~~l~~-P~~~~------------------~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~ 694 (953)
...+..+.+++...+| +.+.+|+ |.... ....+++|+||++|||.+..+..
T Consensus 59 ~~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~-------- 128 (365)
T 3ebl_A 59 LEGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSA-------- 128 (365)
T ss_dssp BTTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCT--------
T ss_pred CCCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCC--------
Confidence 3456678899998888 7788887 87531 11234689999999985432211
Q ss_pred CCCCCccchHHHHHHHc-CcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeCh
Q 002209 695 NEFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG----VAHPS-KIAVGGHSY 768 (953)
Q Consensus 695 ~~~~~~~~~~~~~la~~-G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-~i~l~G~S~ 768 (953)
.. .........|+++ ||+|+.++|+...+. .+...++|+.++++|+.++. .+|++ ||+|+|+|+
T Consensus 129 ~~--~~~~~~~~~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~ 198 (365)
T 3ebl_A 129 SS--TIYDSLCRRFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSS 198 (365)
T ss_dssp TB--HHHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETH
T ss_pred ch--hhHHHHHHHHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCc
Confidence 00 0012345667775 999999888644322 13466799999999999764 58998 999999999
Q ss_pred HHHHHHHHHHhCCC---cccEEEEcccCCCCCCCCcCccc----------ccchhhhhH------HHHHhcCccc-ccCC
Q 002209 769 GAFMTANLLAHAPH---LFCCGIARSGAYNRTLTPFGFQN----------EDRTLWEAT------STYVEMSPFM-SANK 828 (953)
Q Consensus 769 GG~~a~~~a~~~p~---~~~a~v~~~~~~d~~~~~~~~~~----------~~~~~~~~~------~~~~~~sp~~-~~~~ 828 (953)
||++|+.++.+.++ .++++|+++|+++.......... .....|... ......+|+. ....
T Consensus 199 GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 278 (365)
T 3ebl_A 199 GGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRR 278 (365)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCC
T ss_pred cHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchh
Confidence 99999999987654 79999999998874322110000 000001000 0000112322 2334
Q ss_pred CC----CcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCC---CcccHHHHHHHHHHHHHHhccCC
Q 002209 829 LK----KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA---ARESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 829 i~----~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
++ .|+||+||+.|.. ..++.+++++|++.|+++++++|||++|++. ..+....+++.+.+||+++++.+
T Consensus 279 l~~~~~pP~Li~~G~~D~l----~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 279 LGGLPFAKSLIIVSGLDLT----CDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYG 354 (365)
T ss_dssp CTTSCCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC--
T ss_pred hccCCCCCEEEEEcCcccc----hhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 44 5899999999965 4567899999999999999999999999875 34566789999999999998755
Q ss_pred C
Q 002209 902 T 902 (953)
Q Consensus 902 ~ 902 (953)
.
T Consensus 355 ~ 355 (365)
T 3ebl_A 355 S 355 (365)
T ss_dssp -
T ss_pred c
Confidence 3
No 32
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.87 E-value=5.1e-21 Score=204.17 Aligned_cols=237 Identities=14% Similarity=0.096 Sum_probs=164.1
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCC-CCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDP-SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (953)
|..+.+++. .+|..+.+.+|.|+.... ...++.|+||++|||.+..+. ... ....+..|+++||.|
T Consensus 2 m~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~--------~~~----~~~~~~~l~~~G~~v 68 (277)
T 3bxp_A 2 MQVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHS--------GRE----EAPIATRMMAAGMHT 68 (277)
T ss_dssp EEEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCC--------CTT----HHHHHHHHHHTTCEE
T ss_pred cceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCC--------Ccc----chHHHHHHHHCCCEE
Confidence 445677774 577889999999973210 112358999999997432211 111 123456788899999
Q ss_pred EEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC------------
Q 002209 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA------------ 780 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~------------ 780 (953)
+.++++ |+|.... .....+.|+.++++++.+.. .+|+++|+|+|||+||.+|+.++.++
T Consensus 69 ~~~d~~---g~g~~~~---~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 142 (277)
T 3bxp_A 69 VVLNYQ---LIVGDQS---VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLD 142 (277)
T ss_dssp EEEECC---CSTTTCC---CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCT
T ss_pred EEEecc---cCCCCCc---cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcc
Confidence 996664 4442111 23466788889999987752 36778999999999999999999985
Q ss_pred --CCcccEEEEcccCCCCCCCCcCcccccchhh-hhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHH
Q 002209 781 --PHLFCCGIARSGAYNRTLTPFGFQNEDRTLW-EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (953)
Q Consensus 781 --p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~ 857 (953)
+.+++++|+.+|+.+.... +... .... .....+...+|...+.++.+|+|++||++|..+| ++++.+++++
T Consensus 143 ~~~~~~~~~v~~~p~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~ 216 (277)
T 3bxp_A 143 HYQGQHAAIILGYPVIDLTAG---FPTT-SAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVP--PINSLKYVQA 216 (277)
T ss_dssp TCCCCCSEEEEESCCCBTTSS---SSSS-HHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSC--THHHHHHHHH
T ss_pred cccCCcCEEEEeCCcccCCCC---CCCc-cccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccC--hHHHHHHHHH
Confidence 6789999999998763321 1110 0000 0000123456777788888999999999999998 9999999999
Q ss_pred HHhCCCcEEEEEeCCCCccCCCcc--------------cHHHHHHHHHHHHHHhc
Q 002209 858 LKGHGALCRLVILPFESHGYAARE--------------SIMHVLWETDRWLQKYC 898 (953)
Q Consensus 858 l~~~g~~~~~~~~~~~~H~~~~~~--------------~~~~~~~~i~~fl~~~l 898 (953)
++..+.+++++++++++|.+.... ....+.+.+.+||.++.
T Consensus 217 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 217 MLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 999999999999999999764332 24677888999998864
No 33
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.86 E-value=5e-20 Score=193.08 Aligned_cols=213 Identities=17% Similarity=0.164 Sum_probs=162.1
Q ss_pred ceE--EEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEE
Q 002209 638 QKE--LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (953)
Q Consensus 638 ~~~--~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (953)
+.| .+++++.+| .+.++++.|.+ .+.|+||++||.+...+. ............|+++||.|
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~------~~~p~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~G~~v 82 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFGGT----------MNNQIVYQLFYLFQKRGFTT 82 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGTCC----------TTSHHHHHHHHHHHHTTCEE
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC------CCCCEEEEECCCcccCCC----------ccchHHHHHHHHHHHCCCEE
Confidence 355 888998888 89999998853 237999999995321110 00001124566788999999
Q ss_pred EEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC
Q 002209 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d 795 (953)
+.+++ +|+|.+..........+.|+.++++++.++. .+.++++++|||+||.+++.++.++|+ ++++|+++|..+
T Consensus 83 ~~~d~---~g~G~s~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 157 (249)
T 2i3d_A 83 LRFNF---RSIGRSQGEFDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPN 157 (249)
T ss_dssp EEECC---TTSTTCCSCCCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTT
T ss_pred EEECC---CCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchh
Confidence 99555 5666664432222344599999999998875 377799999999999999999999988 999999998754
Q ss_pred CCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHh-CCCcEEEEEeCCCC
Q 002209 796 RTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG-HGALCRLVILPFES 874 (953)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~ 874 (953)
.. ....+.++++|+|+++|++|..++ ++.+.++++.++. .+.+++++++++++
T Consensus 158 ~~------------------------~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 211 (249)
T 2i3d_A 158 TY------------------------DFSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGAN 211 (249)
T ss_dssp TS------------------------CCTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTCC
T ss_pred hh------------------------hhhhhcccCCCEEEEEcCCCCCCC--HHHHHHHHHHHhhccCCceeEEEECCCC
Confidence 21 122345678999999999999998 9999999999986 45679999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHhccC
Q 002209 875 HGYAARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
|.+. +....+.+.+.+||.+++..
T Consensus 212 H~~~--~~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 212 HFFN--GKVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp TTCT--TCHHHHHHHHHHHHHHHHTT
T ss_pred cccc--cCHHHHHHHHHHHHHHhcCC
Confidence 9875 56788899999999999854
No 34
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.86 E-value=1e-20 Score=211.43 Aligned_cols=226 Identities=17% Similarity=0.216 Sum_probs=168.1
Q ss_pred ceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 638 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
..+.++|.+. +|..+.+++|+|+++.+.+ ++|+||++||+.........+.... ..+.. ..........|+.|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~--~~Pvvv~lHG~g~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~vv 217 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDR--KYPLVVFLHGAGERGTDNYLQVAGN-RGAVV--WAQPRYQVVHPCFVL 217 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTS--CEEEEEEECCGGGCSSSSSHHHHSS-TTTTG--GGSHHHHTTSCCEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCC--CccEEEEECCCCCCCCchhhhhhcc-cccee--ecCccccccCCEEEE
Confidence 3577889988 9999999999999876544 5999999999754332221111110 00111 111223456889999
Q ss_pred EcCCCCCCCCCChhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 717 GGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
.+++++..++|..+.. .......+.|+.++++++.++..+|++||+|+||||||++++.++.++|++|+++|+++|.
T Consensus 218 ~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 218 APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp EECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred EecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 9888776666654331 1122456788899999999887799999999999999999999999999999999999987
Q ss_pred CCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCC-CcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC
Q 002209 794 YNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (953)
Q Consensus 794 ~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 872 (953)
.+ + ..+.+++ +|+|++||+.|..|| ++++++++++|++.+.++++++||+
T Consensus 298 ~~--------------------------~-~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~~ 348 (380)
T 3doh_A 298 GD--------------------------V-SKVERIKDIPIWVFHAEDDPVVP--VENSRVLVKKLAEIGGKVRYTEYEK 348 (380)
T ss_dssp CC--------------------------G-GGGGGGTTSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEECT
T ss_pred CC--------------------------h-hhhhhccCCCEEEEecCCCCccC--HHHHHHHHHHHHHCCCceEEEEecC
Confidence 42 1 1122333 899999999999999 9999999999999999999999999
Q ss_pred C---CccCCCcccHHHHHH--HHHHHHHHh
Q 002209 873 E---SHGYAARESIMHVLW--ETDRWLQKY 897 (953)
Q Consensus 873 ~---~H~~~~~~~~~~~~~--~i~~fl~~~ 897 (953)
+ +|++.........+. .+.+||.++
T Consensus 349 ~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 349 GFMEKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp THHHHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred CcccCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 8 454444444555566 889999865
No 35
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.86 E-value=6.8e-21 Score=209.60 Aligned_cols=236 Identities=16% Similarity=0.114 Sum_probs=170.3
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCc
Q 002209 634 LASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (953)
Q Consensus 634 ~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (953)
...+..+.+++++.+|.++.++++.|++. .++.|+||++||+.... .+ ......|+++||
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~----~~~~p~vv~~HG~g~~~------------~~----~~~~~~l~~~G~ 122 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGR------------GF----PHDWLFWPSMGY 122 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCC------------CC----GGGGCHHHHTTC
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC----CCCccEEEEEcCCCCCC------------CC----chhhcchhhCCC
Confidence 34556889999999999999999999763 23589999999964221 01 112346788999
Q ss_pred EEEEcCCCCCCCCCC--hhhh----------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChH
Q 002209 714 AILGGPTTPIIGEGD--EEAN----------------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYG 769 (953)
Q Consensus 714 ~V~~~~~~~~~G~G~--~~~~----------------------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~G 769 (953)
+|+.+|+++..+.+. +... ..++...+.|+.++++++.+++.+|+++|+|+|+|+|
T Consensus 123 ~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~G 202 (337)
T 1vlq_A 123 ICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQG 202 (337)
T ss_dssp EEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred EEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHH
Confidence 999977765432111 0010 1224578999999999999998889999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEcccCCCCCCC-----C-cCcccccc----hh---hhhHHHHHhcCcccccCCCCCcEEEE
Q 002209 770 AFMTANLLAHAPHLFCCGIARSGAYNRTLT-----P-FGFQNEDR----TL---WEATSTYVEMSPFMSANKLKKPILLV 836 (953)
Q Consensus 770 G~~a~~~a~~~p~~~~a~v~~~~~~d~~~~-----~-~~~~~~~~----~~---~~~~~~~~~~sp~~~~~~i~~P~Li~ 836 (953)
|.+++.++.++| .++++|+.+|..+.... . ..+..... .. ......+..++|...+.++++|+|++
T Consensus 203 G~la~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 281 (337)
T 1vlq_A 203 GGIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFS 281 (337)
T ss_dssp HHHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHhcCC-CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEE
Confidence 999999999997 59999998886442100 0 00000000 00 00112234456777888999999999
Q ss_pred EeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
||+.|.++| ++++.+++++++. +++++++|+++|.+. .....+.+.+||.++++
T Consensus 282 ~G~~D~~~p--~~~~~~~~~~l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 282 VGLMDNICP--PSTVFAAYNYYAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp EETTCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC
T ss_pred eeCCCCCCC--chhHHHHHHhcCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHh
Confidence 999999998 9999999888864 489999999999863 23567889999999885
No 36
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.85 E-value=1.3e-20 Score=202.40 Aligned_cols=232 Identities=16% Similarity=0.131 Sum_probs=169.9
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
..+.++++. +|.++.++++.|+ +.|+||++||+... ... .......|+++||.|+.
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~~-----------~~~----~~~~~~~l~~~g~~v~~ 60 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGGS-----------QHH----SLVRAREAVGLGCICMT 60 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTCC-----------TTT----THHHHHHHHTTTCEEEC
T ss_pred ceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCCC-----------cCc----HHHHHHHHHHCCCEEEE
Confidence 356777876 7899999999986 27999999996421 111 22446678889999999
Q ss_pred cCCCCCCCCCChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC
Q 002209 718 GPTTPIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d 795 (953)
++.+|+|.+.... ......++|+.++++++.+++.+|.++++|+||||||.+++.++.++| ++++++++|...
T Consensus 61 ---~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~ 135 (290)
T 3ksr_A 61 ---FDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALY 135 (290)
T ss_dssp ---CCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCC
T ss_pred ---eecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchh
Confidence 4556777765432 245778899999999999888888899999999999999999999987 788888887654
Q ss_pred CCCCCcCcccccchhhhhHHHH-------HhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002209 796 RTLTPFGFQNEDRTLWEATSTY-------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (953)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~-------~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (953)
... .+...............+ ...++...+.++++|+|++||+.|..++ +.++.++++.++..+ +++++
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~~~~-~~~~~ 211 (290)
T 3ksr_A 136 KDA-HWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVP--HPVMRNYADAFTNAR-SLTSR 211 (290)
T ss_dssp CSS-CTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSC--HHHHHHHHHHTTTSS-EEEEE
T ss_pred hhh-hhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccC--hHHHHHHHHHhccCC-CceEE
Confidence 221 111110000000001111 1112233456688999999999999998 999999999997765 78999
Q ss_pred EeCCCCccCCCcccHHHHHHHHHHHHHHhccCCC
Q 002209 869 ILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 869 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (953)
++++++|.+...+....+.+.+.+||++++....
T Consensus 212 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~ 245 (290)
T 3ksr_A 212 VIAGADHALSVKEHQQEYTRALIDWLTEMVVGRR 245 (290)
T ss_dssp EETTCCTTCCSHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EcCCCCCCCCcchHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999886655677888999999999987543
No 37
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.85 E-value=1.6e-20 Score=213.06 Aligned_cols=221 Identities=19% Similarity=0.200 Sum_probs=157.0
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChh
Q 002209 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE 730 (953)
Q Consensus 651 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~ 730 (953)
.+.+++|.|++ .++.|+||++||+... .....+..|+++||+|+++|+++ +|.+.
T Consensus 144 ~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~-----------------~~~~~a~~La~~Gy~V~a~D~rG---~g~~~ 198 (422)
T 3k2i_A 144 RVRATLFLPPG-----PGPFPGIIDIFGIGGG-----------------LLEYRASLLAGHGFATLALAYYN---FEDLP 198 (422)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCTTCS-----------------CCCHHHHHHHTTTCEEEEEECSS---STTSC
T ss_pred cEEEEEEcCCC-----CCCcCEEEEEcCCCcc-----------------hhHHHHHHHHhCCCEEEEEccCC---CCCCC
Confidence 68999999975 3458999999996311 11234667889999999977765 43332
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccc----
Q 002209 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE---- 806 (953)
Q Consensus 731 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~---- 806 (953)
.. .....++|+.+++++|.++..+|.++|+|+||||||.+++.++.++|+ ++++|+++|........+.+...
T Consensus 199 ~~--~~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 275 (422)
T 3k2i_A 199 NN--MDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPP 275 (422)
T ss_dssp SS--CSCEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECC
T ss_pred CC--cccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCC
Confidence 11 111236788999999999888889999999999999999999999987 99999988875322211111000
Q ss_pred -----------------cchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHH-HHHHHHHHhCCCc-EEE
Q 002209 807 -----------------DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGAL-CRL 867 (953)
Q Consensus 807 -----------------~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~-~~~~~~l~~~g~~-~~~ 867 (953)
....+.........+....+.++++|+|++||++|.++| ..+. ..+.+.+++.+.+ +++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 353 (422)
T 3k2i_A 276 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWR--SELYAQTVSERLQAHGKEKPQI 353 (422)
T ss_dssp CCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCC--HHHHHHHHHHHHHhcCCCCCEE
Confidence 000001111111123334567789999999999999998 7765 6889999999888 999
Q ss_pred EEeCCCCccCCC---------------------------cccHHHHHHHHHHHHHHhccCC
Q 002209 868 VILPFESHGYAA---------------------------RESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 868 ~~~~~~~H~~~~---------------------------~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
++||++||.+.. .+..+++++.+.+||+++|+..
T Consensus 354 ~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 354 ICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp EEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999732 1346678899999999999754
No 38
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=1.2e-20 Score=224.28 Aligned_cols=295 Identities=9% Similarity=0.020 Sum_probs=193.1
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCcee
Q 002209 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (953)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~ 180 (953)
.+..+... .+..++|||||++|||.+.. ++ .+.||++. + +..+
T Consensus 15 ~~~~~~~~-~~~~~~~~~DG~~la~~s~~------------------------~g--------~~~lw~~~--~--g~~~ 57 (582)
T 3o4h_A 15 DVERLIAV-EKYSLQGVVDGDKLLVVGFS------------------------EG--------SVNAYLYD--G--GETV 57 (582)
T ss_dssp HHHHHHHS-CEEEEEEEETTTEEEEEEEE------------------------TT--------EEEEEEEE--T--TEEE
T ss_pred HHHHHhcc-chheeecCCCCCeEEEEEcc------------------------CC--------ceeEEEEc--C--CCcE
Confidence 34444444 57889999999999998862 12 33555563 2 5667
Q ss_pred eeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEEC--CCCceeecccCCCccccccccceEEecCCeEE
Q 002209 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV--DTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (953)
Q Consensus 181 ~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~--~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l 258 (953)
+++... ...+..|+|||| +|+|++.. ..++....||++++ +++.. +++.... ....+|+|||+.+
T Consensus 58 ~lt~~~-~~~~~~~~~spd--~~l~~~~~---~~g~~~~~l~~~~~~~~g~~~-~l~~~~~------~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 58 KLNREP-INSVLDPHYGVG--RVILVRDV---SKGAEQHALFKVNTSRPGEEQ-RLEAVKP------MRILSGVDTGEAV 124 (582)
T ss_dssp ECCSSC-CSEECEECTTCS--EEEEEEEC---STTSCCEEEEEEETTSTTCCE-ECTTSCS------BEEEEEEECSSCE
T ss_pred eeeccc-ccccccccCCCC--eEEEEecc---CCCCcceEEEEEeccCCCccc-cccCCCC------ceeeeeCCCCCeE
Confidence 776432 136889999999 68887752 12345678999998 65544 6765544 3367899999877
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCCCccccc
Q 002209 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSL 337 (953)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~~~~~ 337 (953)
+++.. ....++++|+ +|+.++++.... .++
T Consensus 125 ~~~s~------------------------------------------------~~~~~~l~d~~~g~~~~l~~~~~-~~~ 155 (582)
T 3o4h_A 125 VFTGA------------------------------------------------TEDRVALYALDGGGLRELARLPG-FGF 155 (582)
T ss_dssp EEEEE------------------------------------------------CSSCEEEEEEETTEEEEEEEESS-CEE
T ss_pred EEEec------------------------------------------------CCCCceEEEccCCcEEEeecCCC-ceE
Confidence 76621 1123336688 888888775533 789
Q ss_pred ccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002209 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (953)
Q Consensus 338 ~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~ 417 (953)
+|||||++|++.+.+... ...|++||+++++.+.|+.... ....++|||||+.|+ ..
T Consensus 156 ~~spDG~~la~~~~~~~~---------~~~i~~~d~~~g~~~~l~~~~~-------------~~~~~~~SpDG~~l~-~~ 212 (582)
T 3o4h_A 156 VSDIRGDLIAGLGFFGGG---------RVSLFTSNLSSGGLRVFDSGEG-------------SFSSASISPGMKVTA-GL 212 (582)
T ss_dssp EEEEETTEEEEEEEEETT---------EEEEEEEETTTCCCEEECCSSC-------------EEEEEEECTTSCEEE-EE
T ss_pred EECCCCCEEEEEEEcCCC---------CeEEEEEcCCCCCceEeecCCC-------------ccccceECCCCCEEE-Ec
Confidence 999999999998865321 1379999999888888876432 235799999999887 31
Q ss_pred EeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCee--------eccCCceEEEEEecccCceEEEEEcCC
Q 002209 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGIS--------WCDDSLALVYESWYKTRRTRTWVISPG 489 (953)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~--------~SpDg~~l~~~~~~~~~~~~l~~~d~~ 489 (953)
.. ++...|+++|+ ++++.+.++.....+..+. ||||| .+++....++ ..+||.+
T Consensus 213 -~~---------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g-~~~l~~~--- 274 (582)
T 3o4h_A 213 -ET---------AREARLVTVDP---RDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREG-RSAVFID--- 274 (582)
T ss_dssp -EC---------SSCEEEEEECT---TTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETT-EEEEEET---
T ss_pred -cC---------CCeeEEEEEcC---CCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCC-cEEEEEE---
Confidence 11 22347999996 6666664455556666777 99999 6776665543 3567766
Q ss_pred CCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEE
Q 002209 490 SKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (953)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l 567 (953)
+ +.... ....+.. ++|| ||+.++...... ..+.||++|.++ +.++|
T Consensus 275 g---~~~~~---~~~~v~~------~~~s-dg~~l~~~s~~~------------------~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 275 G---ERVEA---PQGNHGR------VVLW-RGKLVTSHTSLS------------------TPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp T---EEECC---CSSEEEE------EEEE-TTEEEEEEEETT------------------EEEEEEEETTCC-EEECC
T ss_pred C---Ceecc---CCCceEE------EEec-CCEEEEEEcCCC------------------CCCeEEEEcCCC-ceEEE
Confidence 2 11111 1112222 7789 888775544211 234688998876 55555
No 39
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.85 E-value=1.2e-20 Score=195.75 Aligned_cols=207 Identities=15% Similarity=0.092 Sum_probs=157.6
Q ss_pred EEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcC
Q 002209 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (953)
Q Consensus 640 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (953)
+.+++++.+|.++.++++.|++ ++.|+||++||+... .......+..|+++||.|+.++
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~------~~~p~vv~~hG~~~~---------------~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK------APAPVIVIAQDIFGV---------------NAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS------CSEEEEEEECCTTBS---------------CHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEecCCCCeEEEEEECCCC------CCCCEEEEEcCCCCC---------------CHHHHHHHHHHHhCCcEEEecc
Confidence 4466788899999999999863 248999999995311 0111244567888999999966
Q ss_pred CCCCCCCCChhh-----------------hhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 002209 720 TTPIIGEGDEEA-----------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (953)
Q Consensus 720 ~~~~~G~G~~~~-----------------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 782 (953)
++ |+|.+.. ........+.|+.++++++.++..++ ++++++|||+||.+++.++.++|
T Consensus 63 ~~---g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~- 137 (236)
T 1zi8_A 63 LY---ARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY- 137 (236)
T ss_dssp GG---GGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC-
T ss_pred cc---ccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC-
Confidence 54 4443311 11224566899999999998876555 69999999999999999999997
Q ss_pred cccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCC
Q 002209 783 LFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG 862 (953)
Q Consensus 783 ~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g 862 (953)
++++++.+|... .++...+.++++|+|+++|++|..+| .+.+.++++.++..+
T Consensus 138 -~~~~v~~~~~~~------------------------~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~ 190 (236)
T 1zi8_A 138 -VDRAVGYYGVGL------------------------EKQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFGANP 190 (236)
T ss_dssp -SSEEEEESCSSG------------------------GGCGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHTTCT
T ss_pred -ccEEEEecCccc------------------------ccchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHHHHhCC
Confidence 999998877421 02334556788999999999999998 999999999997765
Q ss_pred CcEEEEEeCCCCccCCCcc-------cHHHHHHHHHHHHHHhccC
Q 002209 863 ALCRLVILPFESHGYAARE-------SIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 863 ~~~~~~~~~~~~H~~~~~~-------~~~~~~~~i~~fl~~~l~~ 900 (953)
+++++++++++|.+.... ..+.+.+.+.+||+++++.
T Consensus 191 -~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 191 -LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp -TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred -CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 799999999999875332 2457888999999998854
No 40
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.85 E-value=1.4e-20 Score=207.97 Aligned_cols=230 Identities=13% Similarity=0.108 Sum_probs=166.3
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcE
Q 002209 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (953)
..+..+.+++.+.+|..+.++++.|++ .++.|+||++||+.... ..+. ....++++||.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~~-----------~~~~-----~~~~~~~~G~~ 136 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNS-----------GDWN-----DKLNYVAAGFT 136 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCCS-----------CCSG-----GGHHHHTTTCE
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCCC-----------CChh-----hhhHHHhCCcE
Confidence 445678899999999999999999975 24589999999974221 1111 12367899999
Q ss_pred EEEcCCCCCCCCCCh-------------------hhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 002209 715 ILGGPTTPIIGEGDE-------------------EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (953)
Q Consensus 715 V~~~~~~~~~G~G~~-------------------~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 775 (953)
|+.+|+++..+.+.. .....++...+.|+.++++++..+..+|.++|+|+|||+||.+++.
T Consensus 137 v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~ 216 (346)
T 3fcy_A 137 VVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLA 216 (346)
T ss_dssp EEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred EEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHH
Confidence 999776544322211 1122345677899999999999988888999999999999999999
Q ss_pred HHHhCCCcccEEEEcccCCCCCCCCcCcc--cc---------------cchhhhhHHHHHhcCcccccCCCCCcEEEEEe
Q 002209 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQ--NE---------------DRTLWEATSTYVEMSPFMSANKLKKPILLVHG 838 (953)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~d~~~~~~~~~--~~---------------~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G 838 (953)
++.++|+ ++++|+.+|+.+.....+... .. ..........+...++...+.++++|+|+++|
T Consensus 217 ~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G 295 (346)
T 3fcy_A 217 CAALEPR-VRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVG 295 (346)
T ss_dssp HHHHSTT-CCEEEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEE
T ss_pred HHHhCcc-ccEEEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEee
Confidence 9999987 999999998754211000000 00 00000111222334556677889999999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+.|..+| +..+.+++++++. +++++++|+++|.+. ..+.+.+.+||.+
T Consensus 296 ~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~ 343 (346)
T 3fcy_A 296 LMDQVCP--PSTVFAAYNNIQS---KKDIKVYPDYGHEPM-----RGFGDLAMQFMLE 343 (346)
T ss_dssp TTCSSSC--HHHHHHHHTTCCS---SEEEEEETTCCSSCC-----TTHHHHHHHHHHT
T ss_pred CCCCcCC--HHHHHHHHHhcCC---CcEEEEeCCCCCcCH-----HHHHHHHHHHHHH
Confidence 9999998 8888888877654 689999999999985 3457788999876
No 41
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.85 E-value=1.4e-20 Score=214.42 Aligned_cols=221 Identities=14% Similarity=0.189 Sum_probs=155.1
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChh
Q 002209 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE 730 (953)
Q Consensus 651 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~ 730 (953)
.+.+++|.|++ .++.|+||++||+... .+ ...+..|+++||+|+++|+++..+.....
T Consensus 160 ~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~-------------~~----~~~a~~La~~Gy~Vla~D~rG~~~~~~~~ 217 (446)
T 3hlk_A 160 RVRGTLFLPPE-----PGPFPGIVDMFGTGGG-------------LL----EYRASLLAGKGFAVMALAYYNYEDLPKTM 217 (446)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCSSCS-------------CC----CHHHHHHHTTTCEEEEECCSSSTTSCSCC
T ss_pred eEEEEEEeCCC-----CCCCCEEEEECCCCcc-------------hh----hHHHHHHHhCCCEEEEeccCCCCCCCcch
Confidence 58999999975 3458999999996311 01 12367789999999997776543322211
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccc----
Q 002209 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE---- 806 (953)
Q Consensus 731 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~---- 806 (953)
. ...++|+.+++++|.++..+|.++|+|+||||||.+|+.++.++|+ ++++|+++|........+.+...
T Consensus 218 ~-----~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
T 3hlk_A 218 E-----TLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPP 291 (446)
T ss_dssp S-----EEEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECC
T ss_pred h-----hCCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCc
Confidence 1 1236888999999999988899999999999999999999999987 99999998865322111100000
Q ss_pred -----------------cchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHH-HHHHHHHHhCCCc-EEE
Q 002209 807 -----------------DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGAL-CRL 867 (953)
Q Consensus 807 -----------------~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~-~~~~~~l~~~g~~-~~~ 867 (953)
....+..............+.++++|+|++||++|.++| ..+. .++++.++..+.+ +++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 369 (446)
T 3hlk_A 292 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWK--SEFYANEACKRLQAHGRRKPQI 369 (446)
T ss_dssp CCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcC--hHHHHHHHHHHHHHcCCCCcEE
Confidence 000000000001112223367788999999999999998 7554 7899999999988 899
Q ss_pred EEeCCCCccCC---------------------------CcccHHHHHHHHHHHHHHhccCC
Q 002209 868 VILPFESHGYA---------------------------ARESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 868 ~~~~~~~H~~~---------------------------~~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
++||+++|.+. ..+.....++.+.+||+++|+..
T Consensus 370 ~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 370 ICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp EEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999983 12235678899999999999643
No 42
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.85 E-value=3.8e-20 Score=201.42 Aligned_cols=231 Identities=15% Similarity=0.145 Sum_probs=165.7
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcE
Q 002209 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (953)
..+..+.+++.+.+|..+.++++.|++ .++.|+||++||+... + ...+.....|+++||.
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~--------------~-~~~~~~~~~l~~~g~~ 111 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNAS--------------Y-DGEIHEMVNWALHGYA 111 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCC--------------S-GGGHHHHHHHHHTTCE
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCC--------------C-CCCcccccchhhCCcE
Confidence 344578889998899999999999975 2358999999996421 0 0112233477889999
Q ss_pred EEEcCCCCCCCCCChhhh--------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHH
Q 002209 715 ILGGPTTPIIGEGDEEAN--------------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTA 774 (953)
Q Consensus 715 V~~~~~~~~~G~G~~~~~--------------------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 774 (953)
|+.++++ |+|.+... ..++...+.|+.++++++.++..+|+++|+|+|||+||.+++
T Consensus 112 v~~~d~r---g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 188 (318)
T 1l7a_A 112 TFGMLVR---GQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTI 188 (318)
T ss_dssp EEEECCT---TTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred EEEecCC---CCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHH
Confidence 9997765 44443211 112467899999999999998888889999999999999999
Q ss_pred HHHHhCCCcccEEEEcccCCCCCCC------CcCcccccch------hhhh---HHHHHhcCcccccCCCCCcEEEEEeC
Q 002209 775 NLLAHAPHLFCCGIARSGAYNRTLT------PFGFQNEDRT------LWEA---TSTYVEMSPFMSANKLKKPILLVHGE 839 (953)
Q Consensus 775 ~~a~~~p~~~~a~v~~~~~~d~~~~------~~~~~~~~~~------~~~~---~~~~~~~sp~~~~~~i~~P~Li~~G~ 839 (953)
.++..+|+ ++++|+.+|....... ...+...... .... .......++...+.++++|+|++||+
T Consensus 189 ~~a~~~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~ 267 (318)
T 1l7a_A 189 AAAALSDI-PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGL 267 (318)
T ss_dssp HHHHHCSC-CSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEET
T ss_pred HHhccCCC-ccEEEecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEecc
Confidence 99999976 7788888775431100 0000000000 0000 11222345666778889999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
.|..+| ++++.++++++.. +++++++++++|... ....+.+.+||.++++
T Consensus 268 ~D~~~~--~~~~~~~~~~l~~---~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 268 IDKVTP--PSTVFAAYNHLET---KKELKVYRYFGHEYI-----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp TCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred CCCCCC--cccHHHHHhhcCC---CeeEEEccCCCCCCc-----chhHHHHHHHHHHHhC
Confidence 999998 8999998887754 389999999999842 4567889999999875
No 43
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.84 E-value=1.1e-19 Score=186.65 Aligned_cols=209 Identities=19% Similarity=0.164 Sum_probs=160.3
Q ss_pred CCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEE
Q 002209 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (953)
Q Consensus 636 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (953)
.+..+.++++. +|.++.++++.|++ +.|+||++||+.... ..+ ........|+++||.|
T Consensus 9 ~~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~~-----------~~~--~~~~~~~~l~~~G~~v 67 (223)
T 2o2g_A 9 QPQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSSR-----------YSP--RNRYVAEVLQQAGLAT 67 (223)
T ss_dssp CCCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCCT-----------TCH--HHHHHHHHHHHHTCEE
T ss_pred CceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCCC-----------Ccc--chHHHHHHHHHCCCEE
Confidence 35677888886 88999999999864 379999999963110 000 0123456788899999
Q ss_pred EEcCCCCCCCCCChhhhh------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEE
Q 002209 716 LGGPTTPIIGEGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIA 789 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~ 789 (953)
+.+++ +|+|.+.... ........|+.++++++..++.+|.++++++|||+||.+++.++..+|++++++|+
T Consensus 68 ~~~d~---~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 144 (223)
T 2o2g_A 68 LLIDL---LTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVS 144 (223)
T ss_dssp EEECS---SCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEE
T ss_pred EEEcC---CCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEE
Confidence 99555 5666654321 33567789999999999998888999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEE
Q 002209 790 RSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (953)
Q Consensus 790 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (953)
++|..+. ....+.++++|+|+++|++|..+| .. . .+.++..+.++++++
T Consensus 145 ~~~~~~~-------------------------~~~~~~~~~~P~l~i~g~~D~~~~--~~-~---~~~~~~~~~~~~~~~ 193 (223)
T 2o2g_A 145 RGGRPDL-------------------------APSALPHVKAPTLLIVGGYDLPVI--AM-N---EDALEQLQTSKRLVI 193 (223)
T ss_dssp ESCCGGG-------------------------CTTTGGGCCSCEEEEEETTCHHHH--HH-H---HHHHHHCCSSEEEEE
T ss_pred eCCCCCc-------------------------CHHHHhcCCCCEEEEEccccCCCC--HH-H---HHHHHhhCCCeEEEE
Confidence 9886431 012345678999999999998875 33 2 344455567799999
Q ss_pred eCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 870 LPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 870 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+++++|.+...+....+.+.+.+||+++|+
T Consensus 194 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 194 IPRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp ETTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred eCCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 999999986556678889999999999873
No 44
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.84 E-value=1.2e-19 Score=198.44 Aligned_cols=233 Identities=15% Similarity=0.148 Sum_probs=164.5
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (953)
+..+.+++++.+| .+.+++|.|.+. +.|+||++|||.+..+ ....+ ......|++ .||+|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~------~~p~vv~~HGgg~~~g--------~~~~~----~~~~~~la~~~g~~V 121 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPT------SQATLYYLHGGGFILG--------NLDTH----DRIMRLLARYTGCTV 121 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSS------CSCEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHCSEE
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCC------CCcEEEEECCCCcccC--------Chhhh----HHHHHHHHHHcCCEE
Confidence 4558899999898 899999999751 2499999999854322 11122 234556776 79999
Q ss_pred EEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc------ccE
Q 002209 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL------FCC 786 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~------~~a 786 (953)
+.++++...++ .+...++|+.++++|+.++. .+|++||+|+|+|+||++|+.++.+.++. +++
T Consensus 122 ~~~dyr~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 193 (326)
T 3ga7_A 122 IGIDYSLSPQA--------RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIA 193 (326)
T ss_dssp EEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEE
T ss_pred EEeeCCCCCCC--------CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceE
Confidence 99888643322 13456799999999998863 57899999999999999999999887654 899
Q ss_pred EEEcccCCCCCCCCcC--ccccc-chhhhhHHHHH---------hcCcc-----cccCCCCCcEEEEEeCCCCCCCCchH
Q 002209 787 GIARSGAYNRTLTPFG--FQNED-RTLWEATSTYV---------EMSPF-----MSANKLKKPILLVHGEEDNNSGTLTM 849 (953)
Q Consensus 787 ~v~~~~~~d~~~~~~~--~~~~~-~~~~~~~~~~~---------~~sp~-----~~~~~i~~P~Li~~G~~D~~v~~~~~ 849 (953)
+++.+|+.+....... +.... .........+. ..+|. ..+.+...|+||+||+.|.++ .
T Consensus 194 ~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~----~ 269 (326)
T 3ga7_A 194 ILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI----D 269 (326)
T ss_dssp EEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH----H
T ss_pred EEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH----H
Confidence 9999998764322100 00000 00000011110 11222 123345679999999999874 5
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCccCCCc----ccHHHHHHHHHHHHHHhccC
Q 002209 850 QSDRFFNALKGHGALCRLVILPFESHGYAAR----ESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 850 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~~l~~ 900 (953)
++.+++++|++.|+++++++|||++|++... +....+++.+.+||.++++.
T Consensus 270 ~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 270 DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 8899999999999999999999999998432 34578899999999998853
No 45
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.84 E-value=1.1e-19 Score=190.76 Aligned_cols=227 Identities=20% Similarity=0.170 Sum_probs=158.2
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCC
Q 002209 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (953)
Q Consensus 642 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~ 721 (953)
+++. .+|.++.++++.|++. .++.|+||++||.... ............|+++||.|+++
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~----~~~~p~vvl~HG~~~~-------------~~~~~~~~~~~~l~~~g~~vi~~--- 62 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN----PEKCPLCIIIHGFTGH-------------SEERHIVAVQETLNEIGVATLRA--- 62 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC----CSSEEEEEEECCTTCC-------------TTSHHHHHHHHHHHHTTCEEEEE---
T ss_pred eEEe-cCCcEEEEEEEccCCC----CCCCCEEEEEcCCCcc-------------cccccHHHHHHHHHHCCCEEEEe---
Confidence 4555 4889999999998742 1247999999995311 00111123455678899999994
Q ss_pred CCCCCCChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC-
Q 002209 722 PIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL- 798 (953)
Q Consensus 722 ~~~G~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~- 798 (953)
+.+|+|.+.... ......+.|+.++++++.++..+ ++++|+||||||.+++.++.++|++++++|+.+|......
T Consensus 63 D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (251)
T 2wtm_A 63 DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI 140 (251)
T ss_dssp CCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH
T ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH
Confidence 556777765422 23567788999999999766444 4899999999999999999999999999999988643100
Q ss_pred -----------CCcCccccc-ch----h-hhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhC
Q 002209 799 -----------TPFGFQNED-RT----L-WEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGH 861 (953)
Q Consensus 799 -----------~~~~~~~~~-~~----~-~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~ 861 (953)
......... .. . ..........++...+.++++|+|++||++|..+| ++.+.++++.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~~~-- 216 (251)
T 2wtm_A 141 ARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVP--YEASVAFSKQYK-- 216 (251)
T ss_dssp HHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSC--HHHHHHHHHHSS--
T ss_pred HhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcC--hHHHHHHHHhCC--
Confidence 000000000 00 0 00011111223344556789999999999999998 888888877663
Q ss_pred CCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 862 GALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 862 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+++++++++++|.. .+....+.+.+.+||++++.
T Consensus 217 --~~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 217 --NCKLVTIPGDTHCY--DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp --SEEEEEETTCCTTC--TTTHHHHHHHHHHHHHHHHC
T ss_pred --CcEEEEECCCCccc--chhHHHHHHHHHHHHHHhcc
Confidence 47999999999988 67788899999999998874
No 46
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.84 E-value=8.4e-20 Score=185.47 Aligned_cols=203 Identities=19% Similarity=0.153 Sum_probs=149.8
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
..+.+++++.+| ++.++++.|++ .++.|+||++||++...+.. ...........|+++||.|+.
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~~----------~~~~~~~~~~~l~~~g~~v~~ 68 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHGGTM----------NNKVVTTLAKALDELGLKTVR 68 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGTCCT----------TCHHHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCCCcc----------CCchHHHHHHHHHHCCCEEEE
Confidence 356788999999 99999998864 23489999999954221110 001112355678889999999
Q ss_pred cCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCC
Q 002209 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~ 797 (953)
+++ +|+|.+............|+.++++++.++ .+.++++++|||+||.+++.++ .+| +++++|+++|..+.
T Consensus 69 ~d~---~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~- 140 (208)
T 3trd_A 69 FNF---RGVGKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY- 140 (208)
T ss_dssp ECC---TTSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-
T ss_pred Eec---CCCCCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc-
Confidence 555 566666444233456789999999999887 3457999999999999999999 666 89999999987521
Q ss_pred CCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002209 798 LTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (953)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 877 (953)
.....+..+++|+|++||++|..+| ++.++++++++... ++++++++++|.+
T Consensus 141 -----------------------~~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~H~~ 192 (208)
T 3trd_A 141 -----------------------EGFASLTQMASPWLIVQGDQDEVVP--FEQVKAFVNQISSP---VEFVVMSGASHFF 192 (208)
T ss_dssp -----------------------GGGTTCCSCCSCEEEEEETTCSSSC--HHHHHHHHHHSSSC---CEEEEETTCCSSC
T ss_pred -----------------------CCchhhhhcCCCEEEEECCCCCCCC--HHHHHHHHHHccCc---eEEEEeCCCCCcc
Confidence 0112344568999999999999998 99988888877653 7899999999988
Q ss_pred CCcccHHHHHHHHHHHH
Q 002209 878 AARESIMHVLWETDRWL 894 (953)
Q Consensus 878 ~~~~~~~~~~~~i~~fl 894 (953)
... ...+.+.+.+||
T Consensus 193 ~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 193 HGR--LIELRELLVRNL 207 (208)
T ss_dssp TTC--HHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHh
Confidence 532 356666666665
No 47
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.84 E-value=8.6e-21 Score=202.75 Aligned_cols=238 Identities=20% Similarity=0.191 Sum_probs=157.0
Q ss_pred eEEEEEEc-CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 639 KELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 639 ~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
.+.+++.+ .+|..+.+++|+|+++++.+ ++|+||++||+..... .+.... .....+++.||+|+.
T Consensus 17 ~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~p~vv~lHG~~~~~~-----------~~~~~~-~~~~~~~~~g~~vv~ 82 (280)
T 3i6y_A 17 HKQYSHVSNTLNCAMRFAIYLPPQASTGA--KVPVLYWLSGLTCSDE-----------NFMQKA-GAQRLAAELGIAIVA 82 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGGTTC--CEEEEEEECCTTCCSS-----------HHHHHS-CCHHHHHHHTCEEEE
T ss_pred EEEEEEeccccCCeeEEEEEeCCCCCCCC--CccEEEEecCCCCChh-----------HHhhcc-cHHHHHhhCCeEEEE
Confidence 45566654 57889999999999865433 5999999999642211 111000 123456678999999
Q ss_pred cCCCCCC-----------CCCChhhh----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHH
Q 002209 718 GPTTPII-----------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANL 776 (953)
Q Consensus 718 ~~~~~~~-----------G~G~~~~~----------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 776 (953)
++.++.. |.|.++.. ..+.....+++ ++++.+...+ +++++|+|||+||++|+.+
T Consensus 83 pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~ 158 (280)
T 3i6y_A 83 PDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNEL---PELIESMFPV-SDKRAIAGHSMGGHGALTI 158 (280)
T ss_dssp ECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHH---HHHHHHHSSE-EEEEEEEEETHHHHHHHHH
T ss_pred eCCcccccccCcccccccccCccccccccCCCccchhhHHHHHHHHH---HHHHHHhCCC-CCCeEEEEECHHHHHHHHH
Confidence 7753210 11221110 01222333343 3445444434 5799999999999999999
Q ss_pred HHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCC--CcEEEEEeCCCCCCCCchHH-HHH
Q 002209 777 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQ-SDR 853 (953)
Q Consensus 777 a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Li~~G~~D~~v~~~~~~-~~~ 853 (953)
+.++|++|+++|+++|+++....++...............+...+|...+.+++ +|+||+||+.|.+++ .+. +++
T Consensus 159 a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~ 236 (280)
T 3i6y_A 159 ALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLA--EQLKPEV 236 (280)
T ss_dssp HHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHH--HHTCHHH
T ss_pred HHhCCccccEEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCcccc--chhhHHH
Confidence 999999999999999987643222110000000001122233455655555554 899999999999987 554 899
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+++++++.+++++++++||++|.+. ........+++|+.++|+
T Consensus 237 ~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 237 LEAAASSNNYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 9999999999999999999999863 345667888999999874
No 48
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.84 E-value=1e-20 Score=202.49 Aligned_cols=239 Identities=17% Similarity=0.119 Sum_probs=164.4
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEcCCCCC-CCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCc
Q 002209 635 ASLQKELIKYQRKDGVQLSATLYLPPGYD-PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~-~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (953)
...+.+.+.|...+|..+...+| |+... ....++.|+||++||+.+.... .......+..|+++||
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~------------~~~~~~~~~~l~~~G~ 81 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIP------------VAQAESLAMAFAGHGY 81 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCC------------HHHHHHHHHHHHTTTC
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCC------------ccccHHHHHHHHhCCc
Confidence 33456678888889988888899 76421 0012358999999996432110 0001234566788999
Q ss_pred EEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc-------
Q 002209 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL------- 783 (953)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~------- 783 (953)
.|+.++++ |.|.+. ........|+.++++++.+.. .+|+++++|+||||||.+++.++.++|+.
T Consensus 82 ~v~~~d~~---g~~~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 155 (283)
T 3bjr_A 82 QAFYLEYT---LLTDQQ---PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNV 155 (283)
T ss_dssp EEEEEECC---CTTTCS---SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTC
T ss_pred EEEEEecc---CCCccc---cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCC
Confidence 99997765 444320 012345678888999988753 46778999999999999999999999877
Q ss_pred ------ccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHH
Q 002209 784 ------FCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (953)
Q Consensus 784 ------~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~ 857 (953)
++++|+.+|+.+.... +.............+...++...+.++++|+|++||++|..+| +.++.++++.
T Consensus 156 ~~~~~~~~~~v~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p--~~~~~~~~~~ 230 (283)
T 3bjr_A 156 TPAMLKPNNVVLGYPVISPLLG---FPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVP--ATNTLAYATA 230 (283)
T ss_dssp CHHHHCCSSEEEESCCCCTTSB---C--------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSC--THHHHHHHHH
T ss_pred CcCCCCccEEEEcCCccccccc---cccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCC--hHHHHHHHHH
Confidence 8999999998763211 1000000000000123456777778889999999999999998 9999999999
Q ss_pred HHhCCCcEEEEEeCCCCccCCCcc------------cHHHHHHHHHHHHHHh
Q 002209 858 LKGHGALCRLVILPFESHGYAARE------------SIMHVLWETDRWLQKY 897 (953)
Q Consensus 858 l~~~g~~~~~~~~~~~~H~~~~~~------------~~~~~~~~i~~fl~~~ 897 (953)
++..+.+++++++++++|.+.... ....+.+.+.+||+++
T Consensus 231 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 231 LATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999999999764221 1246778888888763
No 49
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.84 E-value=3.9e-20 Score=201.62 Aligned_cols=221 Identities=16% Similarity=0.069 Sum_probs=154.4
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCCCCCh
Q 002209 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDE 729 (953)
Q Consensus 651 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~ 729 (953)
.+.+++|.|++ .++.|+||++|||.+..+. ...+ ......|++ .||+|+.++++...+.
T Consensus 66 ~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~g~--------~~~~----~~~~~~la~~~g~~vv~~dyr~~p~~--- 125 (322)
T 3fak_A 66 GCAAEWVRAPG-----CQAGKAILYLHGGGYVMGS--------INTH----RSMVGEISRASQAAALLLDYRLAPEH--- 125 (322)
T ss_dssp TEEEEEEECTT-----CCTTCEEEEECCSTTTSCC--------HHHH----HHHHHHHHHHHTSEEEEECCCCTTTS---
T ss_pred CeEEEEEeCCC-----CCCccEEEEEcCCccccCC--------hHHH----HHHHHHHHHhcCCEEEEEeCCCCCCC---
Confidence 38899999975 2358999999997533211 1111 123445565 6999999887643221
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----ccEEEEcccCCCCCCCCcCccc
Q 002209 730 EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQN 805 (953)
Q Consensus 730 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~d~~~~~~~~~~ 805 (953)
.+...++|+.++++|+.++ .+|++||+|+|+|+||++|+.++.+.++. ++++|+++|+++.......+..
T Consensus 126 -----~~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 199 (322)
T 3fak_A 126 -----PFPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT 199 (322)
T ss_dssp -----CTTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH
Confidence 2356779999999999988 57899999999999999999999876554 9999999999875432111100
Q ss_pred ---------ccchhhhhHHHHH--------hcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002209 806 ---------EDRTLWEATSTYV--------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (953)
Q Consensus 806 ---------~~~~~~~~~~~~~--------~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (953)
.....| ....|. ..+|+...-+...|+||+||+.|.+ ..++.+++++|+..|++++++
T Consensus 200 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~----~~~~~~~~~~l~~~g~~~~~~ 274 (322)
T 3fak_A 200 RAEADPMVAPGGINK-MAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL----LDDSIKLDAKAKADGVKSTLE 274 (322)
T ss_dssp TTTTCCSCCSSHHHH-HHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEE
T ss_pred hCccCcccCHHHHHH-HHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc----HHHHHHHHHHHHHcCCCEEEE
Confidence 000000 011111 1244432222235999999999975 568899999999999999999
Q ss_pred EeCCCCccCCC----cccHHHHHHHHHHHHHHhccCCC
Q 002209 869 ILPFESHGYAA----RESIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 869 ~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~~~~ 902 (953)
+||+++|++.. .+....+++.+.+||.++++...
T Consensus 275 ~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3fak_A 275 IWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAALA 312 (322)
T ss_dssp EETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC--
T ss_pred EeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcch
Confidence 99999998742 33467888999999999997543
No 50
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.83 E-value=1.1e-20 Score=201.97 Aligned_cols=240 Identities=17% Similarity=0.177 Sum_probs=152.9
Q ss_pred EEEEEE-cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEc
Q 002209 640 ELIKYQ-RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (953)
Q Consensus 640 ~~~~~~-~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (953)
+.+++. ...|..+.+.+|+|+++.. +++|+||++||+..... .+... ......++++||+|+.+
T Consensus 17 ~~~~~~s~~~~~~~~~~v~~P~~~~~---~~~p~vv~lHG~~~~~~-----------~~~~~-~~~~~~~~~~g~~vv~~ 81 (282)
T 3fcx_A 17 KVFEHDSVELNCKMKFAVYLPPKAET---GKCPALYWLSGLTCTEQ-----------NFISK-SGYHQSASEHGLVVIAP 81 (282)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGT---SCEEEEEEECCTTCCSH-----------HHHHH-SCCHHHHHHHTCEEEEE
T ss_pred EEEEEEchhcCCeeEEEEEcCCCCCC---CCCCEEEEEcCCCCCcc-----------chhhc-chHHHHhhcCCeEEEEe
Confidence 444454 4578899999999987543 35999999999742211 01000 01135677899999998
Q ss_pred CC--CCCCCCC----------Chhh---hh-hhHH--HHHH-HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh
Q 002209 719 PT--TPIIGEG----------DEEA---ND-RFVE--QLVA-CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH 779 (953)
Q Consensus 719 ~~--~~~~G~G----------~~~~---~~-~~~~--~~~~-D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 779 (953)
++ +|..+.| .+.. .. .+.. .... +...+++++.+...+|++||+|+|+||||++|+.++.+
T Consensus 82 d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 161 (282)
T 3fcx_A 82 DTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALK 161 (282)
T ss_dssp CSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHT
T ss_pred ccccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHh
Confidence 86 3332211 1100 00 1100 1122 22344555555555888999999999999999999999
Q ss_pred CCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccC---CCCCcEEEEEeCCCCCCCCchHH--HHHH
Q 002209 780 APHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSAN---KLKKPILLVHGEEDNNSGTLTMQ--SDRF 854 (953)
Q Consensus 780 ~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~---~i~~P~Li~~G~~D~~v~~~~~~--~~~~ 854 (953)
+|++|+++|+++|+.+....++...............+...+|...+. .+++|+|++||+.|.++| ..+ +.++
T Consensus 162 ~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~~ 239 (282)
T 3fcx_A 162 NPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLL--DGQLLPDNF 239 (282)
T ss_dssp STTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHH--TTSSCHHHH
T ss_pred CcccceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccc--cchhhHHHH
Confidence 999999999999987643221110000000000111122334444333 447899999999999986 444 6699
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
++++++.+.+++++++|+++|.+. .....+...++|+.++|+
T Consensus 240 ~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 240 IAACTEKKIPVVFRLQEDYDHSYY---FIATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCceEEEECCCCCcCHH---HHHhhhHHHHHHHHHhhc
Confidence 999999999999999999999873 244567788899998874
No 51
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.83 E-value=1.6e-20 Score=200.69 Aligned_cols=238 Identities=18% Similarity=0.193 Sum_probs=156.5
Q ss_pred eEEEEEEc-CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 639 KELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 639 ~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
.+.+++.+ ..|.++.+.+|+|+++++.+ ++|+||++||+..... .+... ......+++.||+|+.
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~P~vv~lHG~~~~~~-----------~~~~~-~~~~~~~~~~g~~vv~ 80 (280)
T 3ls2_A 15 HKQYTHSAVSTHCTMRFAVFLPPGASESN--KVPVLYWLSGLTCTDE-----------NFMQK-AGAFKKAAELGIAIVA 80 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCBTTB--CEEEEEEECCTTCCSH-----------HHHHH-SCCHHHHHHHTCEEEE
T ss_pred EEEEEEechhcCCceEEEEEcCCCCCCCC--CcCEEEEeCCCCCChh-----------hhhcc-hhHHHHHhhCCeEEEE
Confidence 45666655 57889999999999876433 5999999999642211 01000 0123456678999999
Q ss_pred cCCCCC--C---------CCCChhhh----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHH
Q 002209 718 GPTTPI--I---------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANL 776 (953)
Q Consensus 718 ~~~~~~--~---------G~G~~~~~----------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 776 (953)
++..+. . |.|.++.. ..+......++. .++.+...+ .++++|+|+||||++|+.+
T Consensus 81 ~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~-~~~~~l~G~S~GG~~a~~~ 156 (280)
T 3ls2_A 81 PDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELP---ALIEQHFPV-TSTKAISGHSMGGHGALMI 156 (280)
T ss_dssp CCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHH---HHHHHHSSE-EEEEEEEEBTHHHHHHHHH
T ss_pred eCCcccccccccccccccccCCccccccccccccccccHHHHHHHHHH---HHHHhhCCC-CCCeEEEEECHHHHHHHHH
Confidence 775311 0 12221110 022233333433 444444333 4799999999999999999
Q ss_pred HHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCC----CCcEEEEEeCCCCCCCCchHH-H
Q 002209 777 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL----KKPILLVHGEEDNNSGTLTMQ-S 851 (953)
Q Consensus 777 a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i----~~P~Li~~G~~D~~v~~~~~~-~ 851 (953)
+.++|++|+++++++|+.+....++...............+...+|...+.++ ..|+|++||+.|.+|+ .+. +
T Consensus 157 a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~ 234 (280)
T 3ls2_A 157 ALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLD--EQLKP 234 (280)
T ss_dssp HHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCC--CCCCH
T ss_pred HHhCchhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccC--CchhH
Confidence 99999999999999998764332211000000001111223344555555555 4599999999999997 644 8
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
++++++|++.+++++++++|+++|.+. ........+++|+.++|+
T Consensus 235 ~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 235 QNLVAVAKQKDYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHHTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999863 234667788999999874
No 52
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.1e-18 Score=187.11 Aligned_cols=260 Identities=12% Similarity=0.032 Sum_probs=179.7
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCC-CceeecccCCCcc
Q 002209 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKARPLFQSPDIY 241 (953)
Q Consensus 163 ~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~-g~~~~lt~~~~~~ 241 (953)
..|++||+.+ ++.+.+... ...+..+.|||||++|++.. ...|+++|+++ ++..++......
T Consensus 22 ~~i~~~d~~~----~~~~~~~~~--~~~v~~~~~spdg~~l~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~- 84 (297)
T 2ojh_A 22 SSIEIFNIRT----RKMRVVWQT--PELFEAPNWSPDGKYLLLNS----------EGLLYRLSLAGDPSPEKVDTGFAT- 84 (297)
T ss_dssp EEEEEEETTT----TEEEEEEEE--SSCCEEEEECTTSSEEEEEE----------TTEEEEEESSSCCSCEECCCTTCC-
T ss_pred eeEEEEeCCC----CceeeeccC--CcceEeeEECCCCCEEEEEc----------CCeEEEEeCCCCCCceEecccccc-
Confidence 5799999854 445555443 24688999999999999964 35899999999 888877654321
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc
Q 002209 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (953)
Q Consensus 242 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 321 (953)
..+..+.|+|||+.|++.... .+ +...||.+++
T Consensus 85 --~~~~~~~~spdg~~l~~~~~~--------------------------------------~~-------~~~~l~~~~~ 117 (297)
T 2ojh_A 85 --ICNNDHGISPDGALYAISDKV--------------------------------------EF-------GKSAIYLLPS 117 (297)
T ss_dssp --CBCSCCEECTTSSEEEEEECT--------------------------------------TT-------SSCEEEEEET
T ss_pred --ccccceEECCCCCEEEEEEeC--------------------------------------CC-------CcceEEEEEC
Confidence 115689999999999987210 01 3468999998
Q ss_pred -CCceeEeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccC
Q 002209 322 -DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (953)
Q Consensus 322 -~g~~~~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (953)
+++.+.+.....+..++|||||++|+|+..... ...||.++++++..+.+.... ..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~-------------~~ 174 (297)
T 2ojh_A 118 TGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGE-------------GR 174 (297)
T ss_dssp TCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSS-------------SC
T ss_pred CCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCC-------------Cc
Confidence 777777776655777899999999998774321 114555556666666655432 23
Q ss_pred ccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEeccc--
Q 002209 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKT-- 478 (953)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~-- 478 (953)
+..+.|+|||+.+++.... +....+|.++. +++....+......+..+.|+|||++|++......
T Consensus 175 ~~~~~~s~dg~~l~~~~~~----------~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSR----------TGQMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp EEEEEECTTSSEEEEEECT----------TSSCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred cccceECCCCCEEEEEecC----------CCCccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCC
Confidence 3578999999988776211 23456777774 56666667666666777999999999999876532
Q ss_pred -----CceEEEEEcCCCCCCCcEEeec--CCCccccCCCCCCCeEeccCCCEEEEEeee
Q 002209 479 -----RRTRTWVISPGSKDVAPRILFD--RSSEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (953)
Q Consensus 479 -----~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~ 530 (953)
....|++++++++ +...+.. .....+.. +.|+|||++|++...+
T Consensus 242 ~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~~~------~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGG--NVETLFDLFGGQGTMNS------PNWSPDGDEFAYVRYF 292 (297)
T ss_dssp SCCSSEEEEEEEEETTSC--SCEEEEEEEESTTTSCS------CCBCTTSSEEEEEEEC
T ss_pred cccccCceEEEEEecCCC--CceeeeccCCCCccccc------ceECCCCCEEEEEEec
Confidence 2257999999885 3333332 11122222 6799999999988753
No 53
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=3.5e-19 Score=196.65 Aligned_cols=332 Identities=16% Similarity=0.138 Sum_probs=188.4
Q ss_pred hhHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCce
Q 002209 100 PEIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE 179 (953)
Q Consensus 100 ~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~ 179 (953)
..+++++..+.+..++| ||++|+|+... .+...+ ....+||++++.+ ++.
T Consensus 6 ~~~~~l~~~~~~~~~~~--dG~~i~~~~~~-------------------~~~~~~-----~~~~~l~~~d~~~----~~~ 55 (347)
T 2gop_A 6 WNEKTFAKFAYLSDPRT--KGELVAYVLTK-------------------ANLKDN-----KYENTIVIENLKN----NAR 55 (347)
T ss_dssp ----CCCCSCEEEEEEE--ETTEEEEEEEE-------------------EETTTT-----EEEEEEEEEETTT----CCE
T ss_pred CCcccceeeEEcccceE--CCcEEEEEEee-------------------cCcccC-----CccceEEEEeCCC----Cce
Confidence 34566677777788899 99999998763 111111 1235899999843 445
Q ss_pred eeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEE
Q 002209 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (953)
Q Consensus 180 ~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~ 259 (953)
++| ..+..|.|||||++|||..... +++..+||++++++|+.++++..+. +..+.|||||+.|+
T Consensus 56 ~~l------~~~~~~~~SpDg~~la~~~~~~----~~~~~~l~~~~~~~g~~~~l~~~~~------~~~~~wspdg~~l~ 119 (347)
T 2gop_A 56 RFI------ENATMPRISPDGKKIAFMRANE----EKKVSEIWVADLETLSSKKILEAKN------IRSLEWNEDSRKLL 119 (347)
T ss_dssp EEE------ESCEEEEECTTSSEEEEEEEET----TTTEEEEEEEETTTTEEEEEEEESE------EEEEEECTTSSEEE
T ss_pred EEc------ccCCCeEECCCCCEEEEEEecc----CCCcceEEEEECCCCceEEEEcCCC------ccceeECCCCCEEE
Confidence 555 2367899999999999987532 2356789999999999988876543 56899999999999
Q ss_pred EEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCCCccccccc
Q 002209 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPPAVYTSLDP 339 (953)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~~~~~~ 339 (953)
|........ ... ..+..+.+
T Consensus 120 ~~~~~~~~~------------------------------------------------------~~~------~~~~~~~~ 139 (347)
T 2gop_A 120 IVGFKRRED------------------------------------------------------EDF------IFEDDVPA 139 (347)
T ss_dssp EEEECCCC---------------------------------------------------------------------CCC
T ss_pred EEEccCCCc------------------------------------------------------CCc------EEEcccce
Confidence 884221000 000 00111222
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
..||....... . ..|++|++++++. +.++. + .+..+.||||| ++|...
T Consensus 140 ~~~g~~~~~~~-~-------------~~l~~~d~~~~~~~~~l~~-~--------------~~~~~~~spdg--~~~~~~ 188 (347)
T 2gop_A 140 WFDDLGFFDGE-K-------------TTFWIFDTESEEVIEEFEK-P--------------RFSSGIWHRDK--IVVNVP 188 (347)
T ss_dssp C---------C-E-------------EEEEEEETTTTEEEEEEEE-E--------------TTCEEEEETTE--EEEEEE
T ss_pred eecCcccccCc-c-------------ceEEEEECCCCeEEeeecC-C--------------CcccccCCCCe--EEEEEe
Confidence 33333222111 1 1456666655554 44433 1 11345666666 554432
Q ss_pred eccCCCccccccc-CCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEeccc----CceEEEEEcCCCCCC
Q 002209 419 TQDGGDAKVEVTP-RDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKT----RRTRTWVISPGSKDV 493 (953)
Q Consensus 419 ~~~~~~~~~~~~~-~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~l~~~d~~~~~~ 493 (953)
...... ... ...||+++ +++.+.++.. ... ..+||||++|+|...... ...+||.++ ++
T Consensus 189 ~~~~~~----~~~~~~~l~~~d-----~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-- 252 (347)
T 2gop_A 189 HREIIP----QYFKFWDIYIWE-----DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GK-- 252 (347)
T ss_dssp CCCSSC----CSSCCEEEEEEE-----TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SS--
T ss_pred cccccc----cccccccEEEeC-----CCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC--CC--
Confidence 110000 001 23566665 3445556554 333 334999999999875432 235899999 32
Q ss_pred CcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcc
Q 002209 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (953)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~ 573 (953)
+.+.++......+.. .+.|+ || +++..... ...+|| ++ +++.++++..++.
T Consensus 253 ~~~~l~~~~~~~~~~-----~~~~s-dg--~~~~~~~~------------------~~~~l~-~~--~g~~~~~~~~~~~ 303 (347)
T 2gop_A 253 EVMGILDEVDRGVGQ-----AKIKD-GK--VYFTLFEE------------------GSVNLY-IW--DGEIKPIAKGRHW 303 (347)
T ss_dssp CEEESSTTCCSEEEE-----EEEET-TE--EEEEEEET------------------TEEEEE-EE--SSSEEEEECSSSE
T ss_pred ceEeccccCCcccCC-----ccEEc-Cc--EEEEEecC------------------CcEEEE-Ec--CCceEEEecCCCe
Confidence 344444332111110 15688 87 55544221 133577 77 5677777665432
Q ss_pred cceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEecCCCCC
Q 002209 574 KYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPY 631 (953)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~~~ 631 (953)
+. ..+|++ .+++..++...|.++|.++ |+.++||.+|..+
T Consensus 304 -----v~-------~~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~~ 343 (347)
T 2gop_A 304 -----IM-------GFDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDPI 343 (347)
T ss_dssp -----EE-------EEEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTSTT
T ss_pred -----EE-------eeeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHhH
Confidence 11 134666 5788888888888999987 7788899887643
No 54
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.83 E-value=2.8e-19 Score=183.34 Aligned_cols=210 Identities=13% Similarity=0.084 Sum_probs=157.0
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
..+.+++++.+| .+.++++.|++..+ .+.|+||++||++...+. ............|+++||.|+.
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~---~~~~~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~g~~v~~ 74 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVA---VQPVTAIVCHPLSTEGGS----------MHNKVVTMAARALRELGITVVR 74 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSC---CCSEEEEEECSCTTTTCS----------TTCHHHHHHHHHHHTTTCEEEE
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCc---cccCEEEEECCCCCcCCc----------ccchHHHHHHHHHHHCCCeEEE
Confidence 467889999898 89999999975111 238999999996422110 0001112345667889999999
Q ss_pred cCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCC
Q 002209 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~ 797 (953)
+++ +|+|.+............|+.++++++.++. +.++++++|||+||.+++.++.++ .++++|+++|..+..
T Consensus 75 ~d~---~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~ 147 (220)
T 2fuk_A 75 FNF---RSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW 147 (220)
T ss_dssp ECC---TTSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB
T ss_pred Eec---CCCCCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccch
Confidence 655 5666664443344567899999999998874 567999999999999999999987 799999999875431
Q ss_pred CCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002209 798 LTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (953)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 877 (953)
. +.. +. ...|+|++||++|..+| ++.+.++++.++ .+++++++++++|.+
T Consensus 148 ~---------------------~~~---~~-~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~H~~ 197 (220)
T 2fuk_A 148 D---------------------FSD---VQ-PPAQWLVIQGDADEIVD--PQAVYDWLETLE---QQPTLVRMPDTSHFF 197 (220)
T ss_dssp C---------------------CTT---CC-CCSSEEEEEETTCSSSC--HHHHHHHHTTCS---SCCEEEEETTCCTTC
T ss_pred h---------------------hhh---cc-cCCcEEEEECCCCcccC--HHHHHHHHHHhC---cCCcEEEeCCCCcee
Confidence 1 011 11 25789999999999998 888888887774 347899999999998
Q ss_pred CCcccHHHHHHHHHHHHHHhccC
Q 002209 878 AARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 878 ~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
.. ....+.+.+.+||.+++..
T Consensus 198 ~~--~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 198 HR--KLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp TT--CHHHHHHHHHHHHGGGCSS
T ss_pred hh--hHHHHHHHHHHHHHHHhhc
Confidence 54 3567889999999998853
No 55
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.82 E-value=3.5e-20 Score=197.73 Aligned_cols=235 Identities=14% Similarity=0.125 Sum_probs=154.9
Q ss_pred eEEEEEE-cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 639 KELIKYQ-RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 639 ~~~~~~~-~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
.+.+++. ...|..+.+.+|+|+++. .+++|+||++||+..... .+.... .....+.+.||+|+.
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~~-----------~~~~~~-~~~~~~~~~g~~vv~ 79 (278)
T 3e4d_A 15 QGVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTHA-----------NVMEKG-EYRRMASELGLVVVC 79 (278)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCSH-----------HHHHHS-CCHHHHHHHTCEEEE
T ss_pred EEEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCcc-----------chhhcc-cHHHHHhhCCeEEEe
Confidence 4555564 457889999999998754 235999999999642211 010000 013344567999999
Q ss_pred cCCCCCCCCCChhhhh-------------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 002209 718 GPTTPIIGEGDEEAND-------------------------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFM 772 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~-------------------------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 772 (953)
++++ |+|.+.... .+...... ++++++.+...+|+++++|+||||||.+
T Consensus 80 ~d~~---g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 153 (278)
T 3e4d_A 80 PDTS---PRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTE---ELPALIGQHFRADMSRQSIFGHSMGGHG 153 (278)
T ss_dssp CCSS---CCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHT---HHHHHHHHHSCEEEEEEEEEEETHHHHH
T ss_pred cCCc---ccCcccccccccccccCCccccccCCcCcccchhhHHHHHHH---HHHHHHHhhcCCCcCCeEEEEEChHHHH
Confidence 7664 333321100 11122222 3555666665678899999999999999
Q ss_pred HHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCC--CCcEEEEEeCCCCCCCCchHH
Q 002209 773 TANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL--KKPILLVHGEEDNNSGTLTMQ 850 (953)
Q Consensus 773 a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Li~~G~~D~~v~~~~~~ 850 (953)
|+.++.++|++|+++++++|+++....++...............+...+|...+.++ .+|+|++||+.|..++ ...
T Consensus 154 a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~ 231 (278)
T 3e4d_A 154 AMTIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLE--KGL 231 (278)
T ss_dssp HHHHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHH--HHT
T ss_pred HHHHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccc--cch
Confidence 999999999999999999998774433322110000000111222344555444444 4599999999999876 432
Q ss_pred -HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 851 -SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 851 -~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+.++++++++.+.+++++++||++|.+. ........+++|+.++|+
T Consensus 232 ~~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 232 RPWLFEEAIKGTDIGLTLRMHDRYDHSYY---FISTFMDDHLKWHAERLG 278 (278)
T ss_dssp CTHHHHHHHTTSSCEEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHcCCCceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999863 234567788899988863
No 56
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.82 E-value=4e-18 Score=202.24 Aligned_cols=334 Identities=12% Similarity=0.120 Sum_probs=218.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccc--------cccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceee
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELA--------RPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~ 181 (953)
.+..++|||||++|+....+....+++.. ........+.+.+++.........+.|.+|+.. + ...+.
T Consensus 223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~--~--~~~~~ 298 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN--G--QLLQT 298 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--S--CEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC--C--cEEEE
Confidence 45678899999999988776433333322 122234456677766544434444678999973 2 33344
Q ss_pred eecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEE
Q 002209 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 182 l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 261 (953)
+.++ ...+...+|+|||+.|+.... ...|.+++.++.....+...... +..++|+|||+.|+..
T Consensus 299 ~~~h--~~~v~~~~~~~~~~~l~t~~~---------d~~i~~w~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~ 362 (577)
T 2ymu_A 299 LTGH--SSSVWGVAFSPDGQTIASASD---------DKTVKLWNRNGQHLQTLTGHSSS-----VWGVAFSPDGQTIASA 362 (577)
T ss_dssp ECCC--SSCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCSSC-----EEEEEECTTSSEEEEE
T ss_pred EecC--CCCeEEEEECCCCCEEEEEeC---------CCeEEEEeCCCCeeEEEeCCCCC-----EEEEEECCCCCEEEEE
Confidence 4432 246788999999999988652 44677778877766666543332 6689999999999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCC-ceeEeCCC-Cccccccc
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIGPP-AVYTSLDP 339 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g-~~~~l~~~-~~~~~~~~ 339 (953)
. ..+.+.+++.++ ....+... ..+..++|
T Consensus 363 ~-------------------------------------------------~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 363 S-------------------------------------------------DDKTVKLWNRNGQLLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp E-------------------------------------------------TTSEEEEEETTCCEEEEEECCSSCEEEEEE
T ss_pred e-------------------------------------------------CCCEEEEEcCCCCEEEEecCCCCCeEEEEE
Confidence 1 113455566644 34444444 67888999
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~ 419 (953)
||||++|+..+.+. .|.+|+.++...+.+..+. ..+..++|+||++.++..
T Consensus 394 s~dg~~l~~~~~d~-------------~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~d~~~l~~~--- 444 (577)
T 2ymu_A 394 SPDGQTIASASDDK-------------TVKLWNRNGQLLQTLTGHS-------------SSVWGVAFSPDDQTIASA--- 444 (577)
T ss_dssp CTTSSCEEEEETTS-------------EEEEECTTCCEEEEEECCS-------------SCEEEEEECTTSSEEEEE---
T ss_pred CCCCCEEEEEeCCC-------------EEEEEeCCCCEEEEecCCC-------------CCeEEEEECCCCCEEEEE---
Confidence 99999999887443 8999998877666665432 234578999999977765
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEee
Q 002209 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 499 (953)
+....+.+|++ ++.....+..+...+..++|||||+.|+....+. .+.+++.++ +.....
T Consensus 445 ----------~~d~~v~~w~~---~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~----~i~iw~~~~---~~~~~~ 504 (577)
T 2ymu_A 445 ----------SDDKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK----TVKLWNRNG---QLLQTL 504 (577)
T ss_dssp ----------ETTSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTS----EEEEEETTS---CEEEEE
T ss_pred ----------cCCCEEEEEEC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC----EEEEEcCCC---CEEEEE
Confidence 44567889985 5555556666777788899999999998876543 344555544 233333
Q ss_pred cCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeee
Q 002209 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (953)
Q Consensus 500 ~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~ 579 (953)
......+.. +.|||||++|+....+ ..|++||..+.....+...... +
T Consensus 505 ~~h~~~v~~------l~~s~dg~~l~s~~~d---------------------g~v~lwd~~~~~~~~~~~h~~~-----v 552 (577)
T 2ymu_A 505 TGHSSSVRG------VAFSPDGQTIASASDD---------------------KTVKLWNRNGQLLQTLTGHSSS-----V 552 (577)
T ss_dssp ECCSSCEEE------EEECTTSSCEEEEETT---------------------SEEEEECTTSCEEEEEECCSSC-----E
T ss_pred eCCCCCEEE------EEEcCCCCEEEEEECc---------------------CEEEEEeCCCCEEEEEcCCCCC-----E
Confidence 333333333 7899999999876532 2489999755444444433322 2
Q ss_pred EeeccCCccccccccCCEEEE
Q 002209 580 VALMSDQTEGDLYLNQLKILT 600 (953)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~ 600 (953)
.. ..|+|||+.|+.
T Consensus 553 ~~-------~~fs~dg~~l~s 566 (577)
T 2ymu_A 553 WG-------VAFSPDGQTIAS 566 (577)
T ss_dssp EE-------EEECTTSSCEEE
T ss_pred EE-------EEEcCCCCEEEE
Confidence 22 468999997764
No 57
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.82 E-value=1.2e-19 Score=214.52 Aligned_cols=248 Identities=15% Similarity=0.205 Sum_probs=172.7
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHH---HHHHHcCc
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV---LLWLARGF 713 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~la~~G~ 713 (953)
+..+.+.++..||.+|.+++|+|++. +++|+||++||...... ....+...+ ..... +.|+++||
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~-----~~~P~vl~~hgyg~~~~----~~~~~~~~~---~~~~~~~~~~la~~Gy 90 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA-----KNAPIVLTRTPYDASGR----TERLASPHM---KDLLSAGDDVFVEGGY 90 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHHH----TCSSCCSSH---HHHSCGGGHHHHHTTC
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC-----CCeeEEEEEcCCCCccc----ccccccccc---ccccchhHHHHHhCCe
Confidence 45678899999999999999999762 35899999997321100 000000000 00011 67899999
Q ss_pred EEEEcCCCCCCCCCChhhhh-----hhHH---HHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCcc
Q 002209 714 AILGGPTTPIIGEGDEEAND-----RFVE---QLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (953)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~-----~~~~---~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 784 (953)
+|+.+|++|..+.+...... .+.. ..++|+.++++||.++ ++.| .||+++|+||||++++.+++..|+.|
T Consensus 91 ~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l 169 (615)
T 1mpx_A 91 IRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPAL 169 (615)
T ss_dssp EEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTE
T ss_pred EEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCce
Confidence 99997776554433322111 1122 6789999999999998 7776 59999999999999999999888999
Q ss_pred cEEEEcccCCCCCC-CCc---Cc-cc-----------------------cc----------------------chhhhh-
Q 002209 785 CCGIARSGAYNRTL-TPF---GF-QN-----------------------ED----------------------RTLWEA- 813 (953)
Q Consensus 785 ~a~v~~~~~~d~~~-~~~---~~-~~-----------------------~~----------------------~~~~~~- 813 (953)
+|+|+.++++|... ..+ +. .. .. ...|++
T Consensus 170 ~a~v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (615)
T 1mpx_A 170 KVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKL 249 (615)
T ss_dssp EEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHH
T ss_pred EEEEecCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHH
Confidence 99999999988322 111 00 00 00 000110
Q ss_pred ------HHHHHhcCcccccCC--CCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCc---EEEEEeCCCCccCCC---
Q 002209 814 ------TSTYVEMSPFMSANK--LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL---CRLVILPFESHGYAA--- 879 (953)
Q Consensus 814 ------~~~~~~~sp~~~~~~--i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~---~~~~~~~~~~H~~~~--- 879 (953)
.+.|.+.||+.++++ |++|+|++||..|.+ + ..++.++|++|++.|++ +++++.|. +|....
T Consensus 250 ~~~~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~--~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~ 325 (615)
T 1mpx_A 250 TEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-D--MWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDG 325 (615)
T ss_dssp HHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-C--SSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCC
T ss_pred HhCCCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-c--cccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccc
Confidence 133456789889999 999999999999997 7 88999999999988653 89999998 696510
Q ss_pred ---------ccc-HHHHHHHHHHHHHHhccCC
Q 002209 880 ---------RES-IMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 880 ---------~~~-~~~~~~~i~~fl~~~l~~~ 901 (953)
.+. .....+.+++||++||+..
T Consensus 326 ~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 326 SALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp SEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 111 1233677899999999865
No 58
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.82 E-value=1.5e-19 Score=201.25 Aligned_cols=236 Identities=17% Similarity=0.153 Sum_probs=166.0
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcE
Q 002209 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (953)
..+..+.+++.+.||..+.++++.|++ .+ .++.|+||++||+.... ..+.......|+++||.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~--~~~~p~vv~~hG~~~~~--------------~~~~~~~~~~l~~~G~~ 126 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RG--GDRLPAIVIGGPFGAVK--------------EQSSGLYAQTMAERGFV 126 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CC--SSCEEEEEEECCTTCCT--------------TSHHHHHHHHHHHTTCE
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CC--CCCCCEEEEECCCCCcc--------------hhhHHHHHHHHHHCCCE
Confidence 345678899999999999999999986 22 23589999999963110 01111246678899999
Q ss_pred EEEcCCCCCCCCCChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcc
Q 002209 715 ILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (953)
Q Consensus 715 V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (953)
|+.+|+ +|+|.+.... ......+.|+.++++++.++..+|.++++++|||+||.+++.++.++| .++++|+.+
T Consensus 127 v~~~d~---~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~ 202 (367)
T 2hdw_A 127 TLAFDP---SYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTST 202 (367)
T ss_dssp EEEECC---TTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred EEEECC---CCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEec
Confidence 999665 5566553221 225678899999999999988888899999999999999999999997 599999998
Q ss_pred cCCCC-----CCCC--------------------------cC----cc---cccc-------------------------
Q 002209 792 GAYNR-----TLTP--------------------------FG----FQ---NEDR------------------------- 808 (953)
Q Consensus 792 ~~~d~-----~~~~--------------------------~~----~~---~~~~------------------------- 808 (953)
|+... .... .. .. ....
T Consensus 203 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (367)
T 2hdw_A 203 MYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGN 282 (367)
T ss_dssp CCCHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTC
T ss_pred cccccHHHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccc
Confidence 65210 0000 00 00 0000
Q ss_pred -hhhhhHHHHHhcCcccccCCCC-CcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHH
Q 002209 809 -TLWEATSTYVEMSPFMSANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHV 886 (953)
Q Consensus 809 -~~~~~~~~~~~~sp~~~~~~i~-~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~ 886 (953)
........+...++...+.+++ +|+|++||++|. + +..+.+++++ .+.+++++++|+++|..........+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~--~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~ 355 (367)
T 2hdw_A 283 AWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAH--S--RYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIP 355 (367)
T ss_dssp CCBTTTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--T--HHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSC
T ss_pred hhhhhhHHHhcCCChhHhHHhhcCCceEEEecCCCC--C--HHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHH
Confidence 0001123334556777788898 999999999998 6 7888888776 56789999999999974211111125
Q ss_pred HHHHHHHHHHhc
Q 002209 887 LWETDRWLQKYC 898 (953)
Q Consensus 887 ~~~i~~fl~~~l 898 (953)
.+.+.+||+++|
T Consensus 356 ~~~i~~fl~~~l 367 (367)
T 2hdw_A 356 FDRIAGFFDEHL 367 (367)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 788999999875
No 59
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=2.8e-18 Score=207.37 Aligned_cols=318 Identities=14% Similarity=0.095 Sum_probs=202.0
Q ss_pred CCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCC
Q 002209 108 APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD 187 (953)
Q Consensus 108 ~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~ 187 (953)
...+..++||+| +++|+..+ +..++.. .||++ ..+ +..++|+...
T Consensus 23 ~~~~~~~~~s~~--~~~~~~~~---------------------~~~~~~~------~l~~~--~~~---~~~~~l~~~~- 67 (662)
T 3azo_A 23 SGRPACVGAVGD--EVWWVAPR---------------------PAEAGRA------TLVRR--RAD---GAEESALPAP- 67 (662)
T ss_dssp CSCCEEEEEETT--EEEEEEEE---------------------TTTTTEE------EEEEE--CTT---SCEEESSCTT-
T ss_pred CCccceeEEcCC--eEEEEecC---------------------cccCCcE------EEEEE--CCC---CCcceeCCCC-
Confidence 346778889965 67777752 1122322 55654 222 4456665432
Q ss_pred CCccc---------ceEec--cCCCe-EEEEEeeccccCCCCcceEEEEECC--C-CceeecccCCCccccccccceEEe
Q 002209 188 GAKLN---------FVTWS--QDGKH-LAFSIRIDAEDSSSSKLRVWVADVD--T-GKARPLFQSPDIYLNAIFDNFVWV 252 (953)
Q Consensus 188 ~~~~~---------~~~wS--PDG~~-laf~~~~~~~~~~~~~~~l~~~d~~--~-g~~~~lt~~~~~~~~~~~~~~~ws 252 (953)
..+. .+.|| |||++ |+|+.. ...+||+++++ + ++.++|+..+.......+..++||
T Consensus 68 -~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~--------~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 68 -WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF--------GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp -CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT--------TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEE
T ss_pred -ccccccccccCCccceeeeecCCCeEEEEEEC--------CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEEC
Confidence 2333 56676 99999 999753 25689999998 6 888888874311001125689999
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C------Cce
Q 002209 253 NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D------GTV 325 (953)
Q Consensus 253 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~------g~~ 325 (953)
|||+.|+++..+.... ... .+..+||++++ + |+.
T Consensus 139 pDg~~l~~~~~~~~~~--------------------------------~~~-------~~~~~i~~~~~~~~~~~~~~~~ 179 (662)
T 3azo_A 139 PERGEVWCMAEEFTGE--------------------------------GPS-------DVRRFLAAVPLDGSAAADRSAV 179 (662)
T ss_dssp TTTTEEEEEEEEECSS--------------------------------STT-------CEEEEEEEEETTSTTTTCGGGS
T ss_pred CCCCEEEEEEecccCC--------------------------------CCC-------CceeEEEEEECCCCccccCCce
Confidence 9999999883211000 000 03468999999 7 788
Q ss_pred eEeC-CC-CcccccccCCCCcEEEEEEecCCccccccCCCC-CcceEEEecc-Cc---eEEEeccCCCcccCCccccccc
Q 002209 326 KEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRF-PRQVGVWTTD-GI---FVRELCDLPLAEDIPIAFNSVR 398 (953)
Q Consensus 326 ~~l~-~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~-~~~i~~~d~~-g~---~~~~l~~~~~~~~~p~~~~~~~ 398 (953)
+.++ .. ..+..++|||||++|+|.+.+.+. ..+ ..+|++||++ ++ ..+.++... .
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~------~~~~~~~i~~~d~~~~g~~~~~~~l~~~~------------~ 241 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR------MPWEGTELKTARVTEDGRFADTRTLLGGP------------E 241 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTC------CTTTCEEEEEEEECTTSCEEEEEEEEEET------------T
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCC------CCCCCcEEEEEEECCCCcccccEEeCCCC------------C
Confidence 8888 65 677889999999999999865421 111 2489999998 45 566665421 0
Q ss_pred cCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeeccccc---------CCeeeccCCce
Q 002209 399 KGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRY---------GGISWCDDSLA 469 (953)
Q Consensus 399 ~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~---------~~~~~SpDg~~ 469 (953)
..+..+.|||||+ ++|..+. ++...||++++ ++++.+.++...... ..++|+|||+.
T Consensus 242 ~~~~~~~~spdg~-l~~~~~~----------~~~~~l~~~~~---~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 242 EAIAQAEWAPDGS-LIVATDR----------TGWWNLHRVDP---ATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp BCEEEEEECTTSC-EEEEECT----------TSSCEEEEECT---TTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred ceEcceEECCCCe-EEEEECC----------CCCeEEEEEEC---CCCceeecccccccccCccccccCceEeEeCCCEE
Confidence 2335789999999 7766321 22347999985 566667776554433 34566677775
Q ss_pred EEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEe-ccCCCEEEEEeeeccCCCcEEEEecCCCCCC
Q 002209 470 LVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPE 548 (953)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~ 548 (953)
++.. .. ...+||.++++++ +...++.. ...+ ..+ ++||+.+++.....+
T Consensus 308 ~~~~-~~--~~~~l~~~d~~~~--~~~~l~~~-~~~~--------~~~~s~~~~~~~~~~~~~~---------------- 357 (662)
T 3azo_A 308 AVVH-GK--GAAVLGILDPESG--ELVDAAGP-WTEW--------AATLTVSGTRAVGVAASPR---------------- 357 (662)
T ss_dssp EEEE-BS--SSCEEEEEETTTT--EEEECCSS-CCEE--------EEEEEEETTEEEEEEEETT----------------
T ss_pred EEEE-Ec--CccEEEEEECCCC--cEEEecCC-CCeE--------EEEEecCCCEEEEEEcCCC----------------
Confidence 5444 33 3458999998875 33444322 1111 223 788888887764321
Q ss_pred CCCCeEEEEECCCCceEEEeccC
Q 002209 549 GNIPFLDLFDINTGSKERIWESD 571 (953)
Q Consensus 549 ~~~~~L~~~d~~~~~~~~l~~~~ 571 (953)
....||++|+++++.++|+...
T Consensus 358 -~~~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 358 -TAYEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp -EEEEEEEEETTTCCEEEEESCC
T ss_pred -CCCEEEEEECCCCceEEeecCC
Confidence 2346999999999999887655
No 60
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.82 E-value=3.3e-19 Score=190.43 Aligned_cols=202 Identities=17% Similarity=0.141 Sum_probs=142.2
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh--hhhHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAV 747 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~~ 747 (953)
.+.||++||... +...| ...+..|+++||.|++ .|.+|+|.+... .......+.|+.+++
T Consensus 51 ~~~VlllHG~~~-----------s~~~~----~~la~~La~~Gy~Via---~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~ 112 (281)
T 4fbl_A 51 RIGVLVSHGFTG-----------SPQSM----RFLAEGFARAGYTVAT---PRLTGHGTTPAEMAASTASDWTADIVAAM 112 (281)
T ss_dssp SEEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CceEEEECCCCC-----------CHHHH----HHHHHHHHHCCCEEEE---ECCCCCCCCCccccCCCHHHHHHHHHHHH
Confidence 456889999421 11111 2456788999999999 555788888543 223566789999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCC-----------CcCc-------cc----
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-----------PFGF-------QN---- 805 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~-----------~~~~-------~~---- 805 (953)
++|.+.. ++++|+||||||.+++.++.++|++++++|++++....... .... ..
T Consensus 113 ~~l~~~~----~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (281)
T 4fbl_A 113 RWLEERC----DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVK 188 (281)
T ss_dssp HHHHHHC----SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCC
T ss_pred HHHHhCC----CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHH
Confidence 9997653 58999999999999999999999999999999986542110 0000 00
Q ss_pred c---cchhhhhHHHHHhc--CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc
Q 002209 806 E---DRTLWEATSTYVEM--SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR 880 (953)
Q Consensus 806 ~---~~~~~~~~~~~~~~--sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 880 (953)
. ...+......+... .....+.++++|+|++||++|.+|| ++.+.++++.+.. .+++++++|++||.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e 264 (281)
T 4fbl_A 189 ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVP--PHNGELIYNGIGS--TEKELLWLENSYHVATLD 264 (281)
T ss_dssp CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSC--THHHHHHHHHCCC--SSEEEEEESSCCSCGGGS
T ss_pred HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcC--HHHHHHHHHhCCC--CCcEEEEECCCCCcCccc
Confidence 0 00001111111100 0113457889999999999999999 9999999887753 467999999999987544
Q ss_pred ccHHHHHHHHHHHHHHh
Q 002209 881 ESIMHVLWETDRWLQKY 897 (953)
Q Consensus 881 ~~~~~~~~~i~~fl~~~ 897 (953)
.+.+.+.+.+.+||++|
T Consensus 265 ~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 265 NDKELILERSLAFIRKH 281 (281)
T ss_dssp TTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 45788899999999876
No 61
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.82 E-value=2.7e-19 Score=211.89 Aligned_cols=251 Identities=14% Similarity=0.149 Sum_probs=174.4
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHH-HHHHHcCcEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWLARGFAI 715 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~G~~V 715 (953)
+..+.+.++..||.+|.+++|+|++. +++|+||++||...... .....+...|... .... +.|+++||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-----~~~PvIl~~hpyg~~~~---~~~~~~~~~~~~~-~~~~~~~la~~GyaV 105 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTRTPYNAKGR---ANRVPNALTMREV-LPQGDDVFVEGGYIR 105 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHHH---TCSSTTCSSHHHH-SCGGGHHHHHTTCEE
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-----CCccEEEEECCCCCCcc---ccccccccccccc-ccchHHHHHhCCCEE
Confidence 44578899999999999999999762 35899999996311100 0000000000000 0012 6789999999
Q ss_pred EEcCCCCCCCCCChhhhh-----hhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCcccE
Q 002209 716 LGGPTTPIIGEGDEEAND-----RFV---EQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~-----~~~---~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (953)
+.+|++|..+.+..+... .+. ..+++|+.++++||.++ +++| .||+++|+||||++++.++++.|+.|+|
T Consensus 106 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka 184 (652)
T 2b9v_A 106 VFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKV 184 (652)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEE
Confidence 997777655544332211 122 26889999999999999 8877 5999999999999999999888899999
Q ss_pred EEEcccCCCCCC-CCc---Cccccc----------------------ch------------------------hhhh---
Q 002209 787 GIARSGAYNRTL-TPF---GFQNED----------------------RT------------------------LWEA--- 813 (953)
Q Consensus 787 ~v~~~~~~d~~~-~~~---~~~~~~----------------------~~------------------------~~~~--- 813 (953)
+|+.++++|+.. ..+ +..... .. .|.+
T Consensus 185 ~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (652)
T 2b9v_A 185 AAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHA 264 (652)
T ss_dssp EEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHH
T ss_pred EEecccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHh
Confidence 999999988532 110 000000 00 0110
Q ss_pred ----HHHHHhcCcccccCC--CCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCC--CcEEEEEeCCCCccCCC------
Q 002209 814 ----TSTYVEMSPFMSANK--LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG--ALCRLVILPFESHGYAA------ 879 (953)
Q Consensus 814 ----~~~~~~~sp~~~~~~--i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~------ 879 (953)
.+.|...||+.++++ |++|+|++||..|.+ + ..++.++|++|+..+ +++++++.|+ +|+...
T Consensus 265 ~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~--~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~ 340 (652)
T 2b9v_A 265 HPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-D--MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTL 340 (652)
T ss_dssp CCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-C--SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEE
T ss_pred CCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-c--cccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccC
Confidence 122455788888999 999999999999997 6 678999999999998 8899999997 797411
Q ss_pred ------cc-cHHHHHHHHHHHHHHhccCC
Q 002209 880 ------RE-SIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 880 ------~~-~~~~~~~~i~~fl~~~l~~~ 901 (953)
.+ ......+.+++||++||+..
T Consensus 341 ~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 341 GPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp TTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CccccccccchhhhhhHHHHHHHHHhCCC
Confidence 01 12334678899999999864
No 62
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.81 E-value=2.9e-19 Score=194.27 Aligned_cols=234 Identities=17% Similarity=0.130 Sum_probs=164.4
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCc
Q 002209 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGF 713 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~ 713 (953)
..+..+.+++.+.+|..+.+++|.|.+ ++.|+||++|||.+..+ ....+ ......|+ +.||
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~g--------~~~~~----~~~~~~la~~~g~ 117 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFALG--------NLDTD----HRQCLELARRARC 117 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHTS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCccC--------ChHHH----HHHHHHHHHHcCC
Confidence 346678899999999999999999974 24899999999754322 11111 23455666 4699
Q ss_pred EEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----cccE
Q 002209 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCC 786 (953)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~a 786 (953)
+|+.+|++...++ .+...++|+.++++|+.++ ..+|++||+|+|+|+||++|+.++.+.++ .+++
T Consensus 118 ~vv~~dyr~~p~~--------~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~ 189 (317)
T 3qh4_A 118 AVVSVDYRLAPEH--------PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIF 189 (317)
T ss_dssp EEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCE
T ss_pred EEEEecCCCCCCC--------CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeE
Confidence 9999888643322 2356678999999999875 45788999999999999999999987554 4999
Q ss_pred EEEcccCCCCCCCCcCcccccchhhh--h----HHHHHh-------cCcccccCCCC--CcEEEEEeCCCCCCCCchHHH
Q 002209 787 GIARSGAYNRTLTPFGFQNEDRTLWE--A----TSTYVE-------MSPFMSANKLK--KPILLVHGEEDNNSGTLTMQS 851 (953)
Q Consensus 787 ~v~~~~~~d~~~~~~~~~~~~~~~~~--~----~~~~~~-------~sp~~~~~~i~--~P~Li~~G~~D~~v~~~~~~~ 851 (953)
+++++|+.+...............+. . ...|.. .+|.. ...+. .|+||+||+.|..+ .++
T Consensus 190 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~l~~lpP~li~~G~~D~~~----~~~ 264 (317)
T 3qh4_A 190 QLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGR-RGQLAGLPATLITCGEIDPFR----DEV 264 (317)
T ss_dssp EEEESCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGG-CSCCTTCCCEEEEEEEESTTH----HHH
T ss_pred EEEECceecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCc-ccccCCCCceeEEecCcCCCc----hhH
Confidence 99999998764111000000000000 0 011111 12221 12222 49999999999874 578
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCC----CcccHHHHHHHHHHHHHHhcc
Q 002209 852 DRFFNALKGHGALCRLVILPFESHGYA----ARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~----~~~~~~~~~~~i~~fl~~~l~ 899 (953)
.++.++|++.++++++++||+++|++. ..+....+.+.+.+||.+++.
T Consensus 265 ~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 265 LDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 899999999999999999999999863 234567888999999999874
No 63
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.81 E-value=2.1e-17 Score=195.97 Aligned_cols=348 Identities=12% Similarity=0.105 Sum_probs=224.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccc--------cccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceee
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELA--------RPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~ 181 (953)
.+..+.++|||++|+....+....+++.. ........+.+.+++.........+.|.+|+.. + .....
T Consensus 182 ~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~--~--~~~~~ 257 (577)
T 2ymu_A 182 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--G--QLLQT 257 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT--S--CEEEE
T ss_pred ceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC--C--CEEEE
Confidence 34567899999999987765332222221 122234556777776554444445678999863 2 23333
Q ss_pred eecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEE
Q 002209 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 182 l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 261 (953)
+.. ....+....|+|||+.|+.... ...|.+++.++...+.+..+... +..++|+|||+.|+..
T Consensus 258 ~~~--~~~~v~~v~~~~d~~~l~~~~~---------d~~i~~w~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~t~ 321 (577)
T 2ymu_A 258 LTG--HSSSVNGVAFRPDGQTIASASD---------DKTVKLWNRNGQLLQTLTGHSSS-----VWGVAFSPDGQTIASA 321 (577)
T ss_dssp ECC--CSSCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCSSC-----EEEEEECTTSSEEEEE
T ss_pred Eec--CCCCEEEEEEcCCCCEEEEEeC---------CCEEEEEeCCCcEEEEEecCCCC-----eEEEEECCCCCEEEEE
Confidence 433 2246888999999999988552 45677888766555555433322 6788999999998866
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-Cccccccc
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDP 339 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~ 339 (953)
. ..+.|.++++ +.....+... ..+..++|
T Consensus 322 ~-------------------------------------------------~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~ 352 (577)
T 2ymu_A 322 S-------------------------------------------------DDKTVKLWNRNGQHLQTLTGHSSSVWGVAF 352 (577)
T ss_dssp E-------------------------------------------------TTSCEEEEETTSCEEEEECCCSSCEEEEEE
T ss_pred e-------------------------------------------------CCCeEEEEeCCCCeeEEEeCCCCCEEEEEE
Confidence 1 1134556677 4555666555 67788999
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~ 419 (953)
+|||++|+....+ +.+.+|+.++.....+..+. ..+..++|+|||+.++..
T Consensus 353 s~~g~~l~~~~~d-------------g~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~dg~~l~~~--- 403 (577)
T 2ymu_A 353 SPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVRGVAFSPDGQTIASA--- 403 (577)
T ss_dssp CTTSSEEEEEETT-------------SEEEEEETTCCEEEEEECCS-------------SCEEEEEECTTSSCEEEE---
T ss_pred CCCCCEEEEEeCC-------------CEEEEEcCCCCEEEEecCCC-------------CCeEEEEECCCCCEEEEE---
Confidence 9999999988743 37999998877666655432 234679999999988765
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEee
Q 002209 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 499 (953)
+....|.+|+. ++.....+..+...+..++|+||++.|+....++ .+.+++..+ +.....
T Consensus 404 ----------~~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~----~v~~w~~~~---~~~~~~ 463 (577)
T 2ymu_A 404 ----------SDDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDK----TVKLWNRNG---QLLQTL 463 (577)
T ss_dssp ----------ETTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTS---CEEEEE
T ss_pred ----------eCCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCC----EEEEEECCC---CEEEEE
Confidence 44567889985 5544555666677778899999999998876543 355556544 222222
Q ss_pred cCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeee
Q 002209 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (953)
Q Consensus 500 ~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~ 579 (953)
......+.. +.|||||++|+....+ ..|++||..+...+.+...... +
T Consensus 464 ~~~~~~v~~------~~~spd~~~las~~~d---------------------~~i~iw~~~~~~~~~~~~h~~~-----v 511 (577)
T 2ymu_A 464 TGHSSSVRG------VAFSPDGQTIASASDD---------------------KTVKLWNRNGQLLQTLTGHSSS-----V 511 (577)
T ss_dssp ECCSSCEEE------EEECTTSCEEEEEETT---------------------SEEEEEETTSCEEEEEECCSSC-----E
T ss_pred cCCCCCEEE------EEEcCCCCEEEEEeCC---------------------CEEEEEcCCCCEEEEEeCCCCC-----E
Confidence 223333333 7899999999877632 2488999765444444433322 2
Q ss_pred EeeccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002209 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (953)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 618 (953)
.. .+|+|||+.|+..... ..+++++..+
T Consensus 512 ~~-------l~~s~dg~~l~s~~~d----g~v~lwd~~~ 539 (577)
T 2ymu_A 512 RG-------VAFSPDGQTIASASDD----KTVKLWNRNG 539 (577)
T ss_dssp EE-------EEECTTSSCEEEEETT----SEEEEECTTS
T ss_pred EE-------EEEcCCCCEEEEEECc----CEEEEEeCCC
Confidence 22 4689999977643322 4588888543
No 64
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=8.3e-18 Score=204.50 Aligned_cols=332 Identities=11% Similarity=0.058 Sum_probs=203.1
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCcee
Q 002209 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (953)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~ 180 (953)
++..++.....+.| +|||++++|.... .+... ..||+.+.. + +..+
T Consensus 66 ~~~~~~~~~~~~~p--~~dG~~~~~~~~~----------------------~~~~~------~~l~~~~~~--~--~~~~ 111 (710)
T 2xdw_A 66 RMTELYDYPKYSCH--FKKGKRYFYFYNT----------------------GLQNQ------RVLYVQDSL--E--GEAR 111 (710)
T ss_dssp HHHHHHCSCEECCC--EEETTEEEEEEEC----------------------SSCSS------CEEEEESST--T--SCCE
T ss_pred HHHHhhccccCCCC--EEECCEEEEEEEc----------------------CCceE------EEEEEEcCC--C--CCcE
Confidence 45666666556666 4999999999875 11112 256776542 2 3333
Q ss_pred eee---cCCCCC--cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCC
Q 002209 181 EIQ---GFPDGA--KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNS 255 (953)
Q Consensus 181 ~l~---~~~~~~--~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg 255 (953)
.|. .+..+. .+..++|||||++|||..+.. ++....||++|+++|+..+++..... +..++|||||
T Consensus 112 ~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~----G~~~~~i~v~d~~tg~~~~~~~~~~~-----~~~~~wspDg 182 (710)
T 2xdw_A 112 VFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS----GSDWVTIKFMKVDGAKELPDVLERVK-----FSCMAWTHDG 182 (710)
T ss_dssp EEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET----TCSCEEEEEEETTTTEEEEEEEEEEC-----SCCEEECTTS
T ss_pred EEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC----CCceEEEEEEECCCCCCCcccccCcc-----cceEEEEeCC
Confidence 332 122222 467899999999999988643 44456999999999998775432221 4579999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce--eEeCCC-
Q 002209 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--KEIGPP- 331 (953)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~--~~l~~~- 331 (953)
+.|+|+......... .+. .... ....+||++++ ++.. +.+...
T Consensus 183 ~~l~~~~~~~~~~~~------~~~--------------------~~~~-------~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 183 KGMFYNAYPQQDGKS------DGT--------------------ETST-------NLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp SEEEEEECCCCSSCC------SSS--------------------CCCC-------CCCCEEEEEETTSCGGGCEEEECCT
T ss_pred CEEEEEEECCccccc------ccc--------------------cccc-------CCCCEEEEEECCCCcccceEEeccC
Confidence 999998543221100 000 0000 02357999999 6642 333222
Q ss_pred ---CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC------c--eEEEeccCCCcccCCccccccccC
Q 002209 332 ---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG------I--FVRELCDLPLAEDIPIAFNSVRKG 400 (953)
Q Consensus 332 ---~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g------~--~~~~l~~~~~~~~~p~~~~~~~~~ 400 (953)
....++.|||||++|++.+.+.. ....+|+++|+++ + ..+.|+.... .
T Consensus 230 ~~~~~~~~~~~SpDg~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-------------~ 288 (710)
T 2xdw_A 230 DEPKWMGGAELSDDGRYVLLSIREGC--------DPVNRLWYCDLQQESNGITGILKWVKLIDNFE-------------G 288 (710)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECSS--------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-------------S
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEccC--------CCccEEEEEECcccccccCCccceEEeeCCCC-------------c
Confidence 33568899999999999985431 1134899999985 4 4555554321 1
Q ss_pred ccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC---ceEEeeccc--ccCCeeeccCCceEEEEEe
Q 002209 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEILHKLDL--RYGGISWCDDSLALVYESW 475 (953)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~---~~~l~~~~~--~~~~~~~SpDg~~l~~~~~ 475 (953)
....|+|||+.++|..+.. .....|+++++ +++. .+.+..+.. .+..+.|++++ .|++...
T Consensus 289 -~~~~~s~dg~~l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~ 354 (710)
T 2xdw_A 289 -EYDYVTNEGTVFTFKTNRH---------SPNYRLINIDF---TDPEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYL 354 (710)
T ss_dssp -CEEEEEEETTEEEEEECTT---------CTTCEEEEEET---TSCCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEE
T ss_pred -EEEEEeccCCEEEEEECCC---------CCCCEEEEEeC---CCCCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEE
Confidence 1235999999988874321 23558999996 4443 255654432 45678898555 4555544
Q ss_pred cccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEE
Q 002209 476 YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (953)
Q Consensus 476 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 555 (953)
.+ ...+||++++.++. ....+.. +...+.+ ++++|||+.++|...+. . ....||
T Consensus 355 ~~-g~~~l~~~~~~~g~-~~~~l~~-~~~~v~~------~~~s~d~~~l~~~~ss~--------------~---~P~~i~ 408 (710)
T 2xdw_A 355 HD-VKNTLQLHDLATGA-LLKIFPL-EVGSVVG------YSGQKKDTEIFYQFTSF--------------L---SPGIIY 408 (710)
T ss_dssp ET-TEEEEEEEETTTCC-EEEEECC-CSSEEEE------EECCTTCSEEEEEEECS--------------S---CCCEEE
T ss_pred EC-CEEEEEEEECCCCC-EEEecCC-CCceEEE------EecCCCCCEEEEEEeCC--------------C---CCCEEE
Confidence 44 33589999985541 2233322 2222222 67889999888886432 1 234599
Q ss_pred EEECCCCc--eEEEec
Q 002209 556 LFDINTGS--KERIWE 569 (953)
Q Consensus 556 ~~d~~~~~--~~~l~~ 569 (953)
+||+.+++ .+.+..
T Consensus 409 ~~d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 409 HCDLTKEELEPRVFRE 424 (710)
T ss_dssp EEETTSSSCCCEEEEE
T ss_pred EEECCCCccceEEeee
Confidence 99999988 555544
No 65
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.81 E-value=2e-18 Score=188.02 Aligned_cols=234 Identities=18% Similarity=0.151 Sum_probs=162.5
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCc
Q 002209 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGF 713 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~ 713 (953)
..+.++.+++...+| .+.+++|.|.+ .++.|+||++|||.+..+ +...+ ......|++ .||
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~g--------~~~~~----~~~~~~La~~~g~ 122 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVLG--------DIESY----DPLCRAITNSCQC 122 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCccccC--------ChHHH----HHHHHHHHHhcCC
Confidence 345678899988777 89999999975 234899999999753321 11122 234556775 499
Q ss_pred EEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCC-C-CCCcEEEEEeChHHHHHHHHHHhCCCcc---cEEE
Q 002209 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGV-A-HPSKIAVGGHSYGAFMTANLLAHAPHLF---CCGI 788 (953)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~a~~~p~~~---~a~v 788 (953)
.|+.+|++ |.|.+. +...++|+.++++|+.+... . |+++|+|+|+|+||.+|+.++.+.|++. +++|
T Consensus 123 ~Vv~~Dyr---g~~~~~-----~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~v 194 (323)
T 3ain_A 123 VTISVDYR---LAPENK-----FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQV 194 (323)
T ss_dssp EEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEecCC---CCCCCC-----CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEE
Confidence 99997664 554432 24567899999999987631 1 7889999999999999999999887766 8999
Q ss_pred EcccCCCCCCCCcCcccc-cchhhh--h----HHHH---------HhcCcccc-cCCCCCcEEEEEeCCCCCCCCchHHH
Q 002209 789 ARSGAYNRTLTPFGFQNE-DRTLWE--A----TSTY---------VEMSPFMS-ANKLKKPILLVHGEEDNNSGTLTMQS 851 (953)
Q Consensus 789 ~~~~~~d~~~~~~~~~~~-~~~~~~--~----~~~~---------~~~sp~~~-~~~i~~P~Li~~G~~D~~v~~~~~~~ 851 (953)
+++|+.+.......+... ....+. . ...| ...+|+.. +..+ .|+||++|+.|.. ..++
T Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l----~~~~ 269 (323)
T 3ain_A 195 LIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPL----RDQG 269 (323)
T ss_dssp EESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTT----HHHH
T ss_pred EEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCcc----HHHH
Confidence 999987643221100000 000000 0 0001 01234332 2222 4999999999986 4578
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhcc
Q 002209 852 DRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (953)
..++++++..+++++++++++++|.+.. .+....+.+.+.+||.+++.
T Consensus 270 ~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 270 EAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999753 23457888999999999874
No 66
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.81 E-value=7.8e-19 Score=190.54 Aligned_cols=233 Identities=16% Similarity=0.182 Sum_probs=162.1
Q ss_pred CCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc-CcE
Q 002209 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFA 714 (953)
Q Consensus 636 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~ 714 (953)
....+.+++.+.+| .+.+++|.|++. .++.|+||++|||.+..+ ....+ ......|+++ ||.
T Consensus 45 ~~~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~g--------~~~~~----~~~~~~la~~~g~~ 107 (310)
T 2hm7_A 45 VAEVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVVG--------DLETH----DPVCRVLAKDGRAV 107 (310)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHTSE
T ss_pred cceEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCccccC--------ChhHh----HHHHHHHHHhcCCE
Confidence 45678899998887 999999999753 234899999999753322 11112 2345667775 999
Q ss_pred EEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----cccEE
Q 002209 715 ILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCCG 787 (953)
Q Consensus 715 V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~a~ 787 (953)
|+.+|++ |.|... +...+.|+.++++|+.++. .+|+++++|+||||||.+++.++.++|+ .++++
T Consensus 108 v~~~d~r---g~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~ 179 (310)
T 2hm7_A 108 VFSVDYR---LAPEHK-----FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQ 179 (310)
T ss_dssp EEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCE
T ss_pred EEEeCCC---CCCCCC-----CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEE
Confidence 9997775 444321 2456789999999998864 3678899999999999999999998765 69999
Q ss_pred EEcccCCCCC--CCCcCcccc-cchhhh--h----HHHH---------HhcCcccc--cCCCCCcEEEEEeCCCCCCCCc
Q 002209 788 IARSGAYNRT--LTPFGFQNE-DRTLWE--A----TSTY---------VEMSPFMS--ANKLKKPILLVHGEEDNNSGTL 847 (953)
Q Consensus 788 v~~~~~~d~~--~~~~~~~~~-~~~~~~--~----~~~~---------~~~sp~~~--~~~i~~P~Li~~G~~D~~v~~~ 847 (953)
|+++|..+.. .....+... ....+. . ...| ...+|+.. +..+ .|+||+||++|..
T Consensus 180 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~---- 254 (310)
T 2hm7_A 180 LLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPL---- 254 (310)
T ss_dssp EEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTT----
T ss_pred EEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCc----
Confidence 9999987754 111000000 000000 0 0001 01233321 2223 3999999999986
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhc
Q 002209 848 TMQSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 848 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l 898 (953)
..++..++++++..+.+++++++++++|.+.. .+....+.+.+.+||.+++
T Consensus 255 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 255 RDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 35788999999999999999999999998742 2345678899999999886
No 67
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.80 E-value=8.2e-20 Score=195.49 Aligned_cols=237 Identities=13% Similarity=0.111 Sum_probs=151.5
Q ss_pred eEEEEEE-cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 639 KELIKYQ-RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 639 ~~~~~~~-~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
.+.+++. ...|.++.+.+|+|++++ .+++|+||++||+..... .+... ......+++.||+|+.
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~~-----------~~~~~-~~~~~~~~~~g~~vv~ 86 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTEQ-----------NFITK-SGFQRYAAEHQVIVVA 86 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCSH-----------HHHHH-SCTHHHHHHHTCEEEE
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCcc-----------chhhc-ccHHHHHhhCCeEEEE
Confidence 3444444 346889999999999865 235999999999742211 11000 0123456778999999
Q ss_pred cCCC--CCC---------CCCChhhh----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHH
Q 002209 718 GPTT--PII---------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANL 776 (953)
Q Consensus 718 ~~~~--~~~---------G~G~~~~~----------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 776 (953)
++.. +.. |.|.++.. ..+......++... +.+... +.++++|+||||||++|+.+
T Consensus 87 ~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~-~~~~~~l~G~S~GG~~a~~~ 162 (283)
T 4b6g_A 87 PDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRL---IEKHFP-TNGKRSIMGHSMGGHGALVL 162 (283)
T ss_dssp ECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHH---HHHHSC-EEEEEEEEEETHHHHHHHHH
T ss_pred eccccccccccccccccccCCCcccccCccCcccchhhHHHHHHHHHHHH---HHHhCC-CCCCeEEEEEChhHHHHHHH
Confidence 7742 111 22222110 01123333444444 333322 45799999999999999999
Q ss_pred HHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCC--CCcEEEEEeCCCCCCCCchHH-HHH
Q 002209 777 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL--KKPILLVHGEEDNNSGTLTMQ-SDR 853 (953)
Q Consensus 777 a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Li~~G~~D~~v~~~~~~-~~~ 853 (953)
+.++|++|+++++++|+++....++...............+...+|...+.++ ..|+|++||+.|.+++ ... +++
T Consensus 163 a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~--~~~~~~~ 240 (283)
T 4b6g_A 163 ALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLP--TQLRTED 240 (283)
T ss_dssp HHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHH--HHTCHHH
T ss_pred HHhCCccceeEEEECCccccccCcchhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCc--chhhHHH
Confidence 99999999999999998764322211000000000111122334554444444 3599999999999876 522 899
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
++++|++.+++++++++||++|.+. ........+++|+.++|+
T Consensus 241 ~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 241 FIETCRAANQPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHHHHHTCCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999863 244567788899988763
No 68
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.80 E-value=4.8e-18 Score=180.01 Aligned_cols=226 Identities=11% Similarity=0.092 Sum_probs=153.8
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
.....++.+.||..+.+++|.|.+ .++.|+||++||+.+..+ . ...+.......+++. |.|+.
T Consensus 2 ~~~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~--------~---~~~~~~~~~~~l~~~-~~v~~ 64 (275)
T 3h04_A 2 TEIKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMFG--------K---ANDLSPQYIDILTEH-YDLIQ 64 (275)
T ss_dssp -CEEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTSC--------C---TTCSCHHHHHHHTTT-EEEEE
T ss_pred cceEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccCC--------c---hhhhHHHHHHHHHhC-ceEEe
Confidence 345677888999999999999874 235899999999753221 1 111122344455555 99999
Q ss_pred cCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCC
Q 002209 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~ 797 (953)
+|++ |.|.+ .....+.|+.++++++.+. ++.++++|+||||||.+++.++.+ ++++++|+++|+.+..
T Consensus 65 ~d~~---~~~~~-----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~ 132 (275)
T 3h04_A 65 LSYR---LLPEV-----SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRIN 132 (275)
T ss_dssp ECCC---CTTTS-----CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSC
T ss_pred eccc---cCCcc-----ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEecccccccc
Confidence 6664 44433 2356788999999999887 456899999999999999999999 6899999999987642
Q ss_pred CCCcCcc---------------------c---ccchhhhhHHH-------------HHh-------cC-cccccCCCCCc
Q 002209 798 LTPFGFQ---------------------N---EDRTLWEATST-------------YVE-------MS-PFMSANKLKKP 832 (953)
Q Consensus 798 ~~~~~~~---------------------~---~~~~~~~~~~~-------------~~~-------~s-p~~~~~~i~~P 832 (953)
....... . ........... +.. .. ....+.+++ |
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P 211 (275)
T 3h04_A 133 TEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-P 211 (275)
T ss_dssp SHHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-C
T ss_pred ccccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-C
Confidence 1100000 0 00000000000 000 00 011125667 9
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH--HHHHHHHHHHHHHhcc
Q 002209 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESI--MHVLWETDRWLQKYCV 899 (953)
Q Consensus 833 ~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~fl~~~l~ 899 (953)
+|++||++|..|| +.++.++++.+. ..+++++++++|.+...... ..+.+.+.+||++++.
T Consensus 212 ~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 212 VFIAHCNGDYDVP--VEESEHIMNHVP----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEEETTCSSSC--THHHHHHHTTCS----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCCCCCC--hHHHHHHHHhcC----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999999998 898888876553 35799999999998654443 6888999999999873
No 69
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.80 E-value=5.4e-19 Score=194.37 Aligned_cols=277 Identities=12% Similarity=0.044 Sum_probs=165.7
Q ss_pred CEEEEEEecCCCCceEEEEECCCCCeeEEecCC-CC-CCC---cCCCceEEEEEEcCCCcEEEEEEEcCCCC-CCCCCCC
Q 002209 596 LKILTSKESKTENTQYYIQSWPDKKSCQITDFP-HP-YPQ---LASLQKELIKYQRKDGVQLSATLYLPPGY-DPSKDGP 669 (953)
Q Consensus 596 ~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~-~~-~~~---~~~~~~~~~~~~~~dg~~~~~~l~~P~~~-~~~~~~~ 669 (953)
..+.+...+...+...+.+. .+|+..++.... .+ .+. ...+..+.+.+.. +..+.+.+|+|++. .+ .++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~--~~~ 82 (338)
T 2o7r_A 8 TTGSSDPNTNLLKYLPIVLN-PDRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYN--SAK 82 (338)
T ss_dssp ----------CTTTCSCEEC-TTSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGS--SCC
T ss_pred CceeeccCcccccccceEEC-CCCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcC--CCC
Confidence 44555544433443334444 355554432111 11 111 2345667788875 45578889999753 11 235
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~ 748 (953)
.|+||++|||.+..+.. .. .........|+ ++||+|+.+|+++ .+.. .....++|+.++++
T Consensus 83 ~p~vv~~HGgg~~~~~~--------~~--~~~~~~~~~la~~~g~~vv~~d~rg---~~~~-----~~~~~~~d~~~~~~ 144 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFSA--------AS--TIFHDFCCEMAVHAGVVIASVDYRL---APEH-----RLPAAYDDAMEALQ 144 (338)
T ss_dssp EEEEEEECCSTTTSCCT--------TB--HHHHHHHHHHHHHHTCEEEEEECCC---TTTT-----CTTHHHHHHHHHHH
T ss_pred ceEEEEEcCCcCcCCCC--------Cc--hhHHHHHHHHHHHCCcEEEEecCCC---CCCC-----CCchHHHHHHHHHH
Confidence 89999999975432211 10 00123455677 7899999977754 3322 12456789999999
Q ss_pred HHHHcC------CCCCCcEEEEEeChHHHHHHHHHHhCCC--------cccEEEEcccCCCCCCCCcC--------c-c-
Q 002209 749 EVVRRG------VAHPSKIAVGGHSYGAFMTANLLAHAPH--------LFCCGIARSGAYNRTLTPFG--------F-Q- 804 (953)
Q Consensus 749 ~l~~~~------~~d~~~i~l~G~S~GG~~a~~~a~~~p~--------~~~a~v~~~~~~d~~~~~~~--------~-~- 804 (953)
|+.++. .+|.++++|+|||+||.+++.++.++|+ +++++|+++|+++....... + .
T Consensus 145 ~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
T 2o7r_A 145 WIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPT 224 (338)
T ss_dssp HHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCH
T ss_pred HHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccCH
Confidence 998762 2677899999999999999999999887 89999999998763321000 0 0
Q ss_pred cccchhhhhH------HHHHhcCccc---------ccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEE
Q 002209 805 NEDRTLWEAT------STYVEMSPFM---------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (953)
Q Consensus 805 ~~~~~~~~~~------~~~~~~sp~~---------~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (953)
......|... ......+|+. .+.++.+|+||+||++|..++ .+.++++++++.+.++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~----~~~~~~~~l~~~~~~~~~~~ 300 (338)
T 2o7r_A 225 FVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID----RQMELAERLEKKGVDVVAQF 300 (338)
T ss_dssp HHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH----HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH----HHHHHHHHHHHCCCcEEEEE
Confidence 0000011100 0000011211 112345699999999998863 56788999999999999999
Q ss_pred eCCCCccCCC--cccHHHHHHHHHHHHHHhcc
Q 002209 870 LPFESHGYAA--RESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 870 ~~~~~H~~~~--~~~~~~~~~~i~~fl~~~l~ 899 (953)
+++++|.+.. .+....+.+.+.+||.+++.
T Consensus 301 ~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 301 DVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp ESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred ECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 9999998742 23346788999999988764
No 70
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.80 E-value=2.6e-18 Score=182.11 Aligned_cols=227 Identities=17% Similarity=0.120 Sum_probs=159.9
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEc
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (953)
.+.+.+. .+|.++.++++.|.+ .+.|+||++||+... ............|+++||.|+.+
T Consensus 22 ~~~~~~~-~~g~~l~~~~~~p~~------~~~p~vv~~HG~~~~-------------~~~~~~~~~~~~l~~~G~~v~~~ 81 (270)
T 3pfb_A 22 MATITLE-RDGLQLVGTREEPFG------EIYDMAIIFHGFTAN-------------RNTSLLREIANSLRDENIASVRF 81 (270)
T ss_dssp EEEEEEE-ETTEEEEEEEEECSS------SSEEEEEEECCTTCC-------------TTCHHHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEec-cCCEEEEEEEEcCCC------CCCCEEEEEcCCCCC-------------ccccHHHHHHHHHHhCCcEEEEE
Confidence 4455554 589999999998864 237999999996321 01111224556788899999995
Q ss_pred CCCCCCCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 719 PTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 719 ~~~~~~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
|+ +|+|.+... .......++|+.++++++.++... ++++|+|||+||.+++.++.++|++++++|+++|..+.
T Consensus 82 d~---~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~ 156 (270)
T 3pfb_A 82 DF---NGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHV--RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATL 156 (270)
T ss_dssp CC---TTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTE--EEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHH
T ss_pred cc---ccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCC--CeEEEEEeCchhHHHHHHHHhCchhhcEEEEecccccc
Confidence 55 567766443 223567789999999999876433 49999999999999999999999999999999987531
Q ss_pred CC------------CCcCccc----cc-chhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHH
Q 002209 797 TL------------TPFGFQN----ED-RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALK 859 (953)
Q Consensus 797 ~~------------~~~~~~~----~~-~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~ 859 (953)
.. .+..... .. .........+...++...+.++++|+|+++|++|..+| ++.+.++++.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~ 234 (270)
T 3pfb_A 157 KGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVS--PNASKKYDQIYQ 234 (270)
T ss_dssp HHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred chhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCC--HHHHHHHHHhCC
Confidence 10 0000000 00 00001122334445566778899999999999999998 888888877643
Q ss_pred hCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 860 GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 860 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
.++++++++++|.+. .+....+.+.+.+||+++
T Consensus 235 ----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 235 ----NSTLHLIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp ----SEEEEEETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred ----CCeEEEcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 479999999999875 556677888888888764
No 71
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.80 E-value=3.4e-18 Score=188.95 Aligned_cols=238 Identities=16% Similarity=0.119 Sum_probs=160.0
Q ss_pred CCCceEEEEEEcCCCcEEEEEEEcCCCCCC------------CCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccc
Q 002209 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDP------------SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGS 702 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~------------~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~ 702 (953)
..+..+.+.+.. +..+.+.+|.|++... ...++.|+||++|||.+..+. ... ....
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~--------~~~--~~~~ 135 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSS--------ANS--AIYD 135 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCC--------TTB--HHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCC--------Ccc--hhHH
Confidence 345566777765 4558889999976420 012458999999997543211 111 0012
Q ss_pred hHHHHHH-HcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChHHHHHHHH
Q 002209 703 TSVLLWL-ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG----VAHPS-KIAVGGHSYGAFMTANL 776 (953)
Q Consensus 703 ~~~~~la-~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-~i~l~G~S~GG~~a~~~ 776 (953)
.....|+ ++||+|+.+|+++. +.. .+...++|+.++++|+.++. .+|.+ +++|+||||||.+|+.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~rg~---~~~-----~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~ 207 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYRRA---PEN-----PYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCCCT---TTS-----CTTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecCCCC---CCC-----CCchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHH
Confidence 3455677 78999999777543 322 12456789999999998754 47889 99999999999999999
Q ss_pred HHhCCC---cccEEEEcccCCCCCCCCcCcc---cc-------cchhhhhH------HHHHhcCcc----cccCCCCC-c
Q 002209 777 LAHAPH---LFCCGIARSGAYNRTLTPFGFQ---NE-------DRTLWEAT------STYVEMSPF----MSANKLKK-P 832 (953)
Q Consensus 777 a~~~p~---~~~a~v~~~~~~d~~~~~~~~~---~~-------~~~~~~~~------~~~~~~sp~----~~~~~i~~-P 832 (953)
+.++|+ +++++|+++|+++......... .. ....|... ......+|+ ..+.+++. |
T Consensus 208 a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 208 ALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp HHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred HHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 999887 8999999999876332110000 00 00001000 000001221 23444555 9
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC---cccHHHHHHHHHHHHHH
Q 002209 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA---RESIMHVLWETDRWLQK 896 (953)
Q Consensus 833 ~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~ 896 (953)
+||+||++|..+ .++.++++++++.+.+++++++++++|.+.. .+....+.+.+.+||++
T Consensus 288 ~Lii~G~~D~~~----~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 288 SLVVVAGLDLIR----DWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEEETTSTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCcch----HHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 999999999874 3678899999999999999999999998754 25567788899999874
No 72
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=2.2e-17 Score=200.12 Aligned_cols=330 Identities=13% Similarity=0.046 Sum_probs=202.7
Q ss_pred hhHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCce
Q 002209 100 PEIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE 179 (953)
Q Consensus 100 ~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~ 179 (953)
.++..++.....+. .+|||++++|...+ .+... ..||+.+.. + +..
T Consensus 61 ~~~~~~~~~~~~~~--p~~dG~~~~~~~~~----------------------~~~~~------~~l~~~~~~--~--~~~ 106 (695)
T 2bkl_A 61 ARFKELFYTDSVST--PSRRNGRFFYVRTH----------------------KDKEK------AILYWRQGE--S--GQE 106 (695)
T ss_dssp HHHHHHHSCCEECC--CEEETTEEEEEEEC----------------------TTCSS------CEEEEEEST--T--SCC
T ss_pred HHHHHhhccccCCC--CEEECCEEEEEEEc----------------------CCCeE------EEEEEEcCC--C--CCc
Confidence 34555665544444 45999999999875 11112 257887752 2 445
Q ss_pred eeeecCC---CC--CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC
Q 002209 180 IEIQGFP---DG--AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN 254 (953)
Q Consensus 180 ~~l~~~~---~~--~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD 254 (953)
+.|+... .+ ..+..++|||||++|||..+.. +++...||++|+++|+..+....+... ...++||||
T Consensus 107 ~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~----G~~~~~i~v~dl~tg~~~~~~~~~~~~----~~~~~wspD 178 (695)
T 2bkl_A 107 KVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN----AADEAVLHVIDVDSGEWSKVDVIEGGK----YATPKWTPD 178 (695)
T ss_dssp EEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET----TCSCCEEEEEETTTCCBCSSCCBSCCT----TCCCEECTT
T ss_pred EEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC----CCceEEEEEEECCCCCCcCCcccCccc----ccceEEecC
Confidence 5554211 11 1578899999999999988643 555689999999999865121112211 258999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--eeEeCCC
Q 002209 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP 331 (953)
Q Consensus 255 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--~~~l~~~ 331 (953)
|+.|+|+..+..+. +. ..+ .....+||++++ ++. .+.+...
T Consensus 179 g~~l~~~~~d~~~~---------~~----------------------~~~-----~~~~~~v~~~~l~t~~~~~~lv~~~ 222 (695)
T 2bkl_A 179 SKGFYYEWLPTDPS---------IK----------------------VDE-----RPGYTTIRYHTLGTEPSKDTVVHER 222 (695)
T ss_dssp SSEEEEEECCCCTT---------SC----------------------GGG-----GGGGCEEEEEETTSCGGGCEEEECC
T ss_pred CCEEEEEEecCCCC---------Cc----------------------ccc-----CCCCCEEEEEECCCCchhceEEEec
Confidence 99999984322110 00 000 013467999999 665 2344332
Q ss_pred ----CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeec
Q 002209 332 ----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (953)
Q Consensus 332 ----~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ws 407 (953)
..+..+.|||||++|++.+.+.. ...+||+++..+++.+.|+.... ....+.|
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~l~~~~~~~~~~~~l~~~~~-------------~~~~~~~- 279 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILRGW---------SENDVYWKRPGEKDFRLLVKGVG-------------AKYEVHA- 279 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEETT---------TEEEEEEECTTCSSCEEEEECSS-------------CCEEEEE-
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeCCC---------CceEEEEEcCCCCceEEeecCCC-------------ceEEEEe-
Confidence 35668999999999999986541 12378899877667777765321 1234556
Q ss_pred cCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc---eEEeec--ccccCCeeeccCCceEEEEEecccCceE
Q 002209 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKL--DLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 408 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~---~~l~~~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
+||+ +++..+.. .....|+++++ ++++. +.+... ...+..++|+ + ..|++....+ ...+
T Consensus 280 ~~g~-l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~l~~~~~~-~-~~lv~~~~~d-g~~~ 343 (695)
T 2bkl_A 280 WKDR-FYVLTDEG---------APRQRVFEVDP---AKPARASWKEIVPEDSSASLLSVSIV-G-GHLSLEYLKD-ATSE 343 (695)
T ss_dssp ETTE-EEEEECTT---------CTTCEEEEEBT---TBCSGGGCEEEECCCSSCEEEEEEEE-T-TEEEEEEEET-TEEE
T ss_pred cCCc-EEEEECCC---------CCCCEEEEEeC---CCCCccCCeEEecCCCCCeEEEEEEE-C-CEEEEEEEEC-CEEE
Confidence 7888 66653221 23568999996 44442 555443 3345667887 4 4555555444 3368
Q ss_pred EEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002209 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (953)
Q Consensus 483 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~ 562 (953)
||+++++++ ....+.-.....+.. ++++|||+.++|...+.. ....||+||++++
T Consensus 344 l~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~~-----------------~P~~v~~~d~~~g 398 (695)
T 2bkl_A 344 VRVATLKGK--PVRTVQLPGVGAASN------LMGLEDLDDAYYVFTSFT-----------------TPRQIYKTSVSTG 398 (695)
T ss_dssp EEEEETTCC--EEEECCCSSSSEECC------CBSCTTCSEEEEEEEETT-----------------EEEEEEEEETTTC
T ss_pred EEEEeCCCC--eeEEecCCCCeEEEE------eecCCCCCEEEEEEcCCC-----------------CCCEEEEEECCCC
Confidence 999998653 223332111222222 568999999988874321 1335999999999
Q ss_pred ceEEEeccC
Q 002209 563 SKERIWESD 571 (953)
Q Consensus 563 ~~~~l~~~~ 571 (953)
+.+.+....
T Consensus 399 ~~~~l~~~~ 407 (695)
T 2bkl_A 399 KSELWAKVD 407 (695)
T ss_dssp CEEEEEECC
T ss_pred cEEEEecCC
Confidence 987776544
No 73
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.80 E-value=7.7e-19 Score=190.91 Aligned_cols=233 Identities=18% Similarity=0.129 Sum_probs=160.1
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (953)
...+.+++.+.+| .+.+++|.|.+ .++.|+||++|||.+..+ ....+ ......|++ .||.|
T Consensus 49 ~~~~~~~i~~~~g-~~~~~~~~P~~-----~~~~p~vv~~HGgg~~~g--------~~~~~----~~~~~~la~~~g~~v 110 (313)
T 2wir_A 49 HRVEDITIPGRGG-PIRARVYRPRD-----GERLPAVVYYHGGGFVLG--------SVETH----DHVCRRLANLSGAVV 110 (313)
T ss_dssp SEEEEEEEEETTE-EEEEEEEECSC-----CSSEEEEEEECCSTTTSC--------CTGGG----HHHHHHHHHHHCCEE
T ss_pred ceEEEEEeeCCCC-cEEEEEEecCC-----CCCccEEEEECCCcccCC--------ChHHH----HHHHHHHHHHcCCEE
Confidence 3577889998887 99999999975 234899999999753221 11111 234556776 59999
Q ss_pred EEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc----ccEEE
Q 002209 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGI 788 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v 788 (953)
+.+++ +|.|.+.. .....|+.++++|+.+.. .+|+++|+|+|+|+||.+++.++.+.|++ ++++|
T Consensus 111 ~~~d~---rg~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 182 (313)
T 2wir_A 111 VSVDY---RLAPEHKF-----PAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQV 182 (313)
T ss_dssp EEEEC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEeec---CCCCCCCC-----CchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEE
Confidence 99666 45555422 345688888999987752 36778999999999999999999988766 99999
Q ss_pred EcccCCC-CCCCCcCcccc---cchhh--hh----HHHH---------HhcCcccccCCCCCcEEEEEeCCCCCCCCchH
Q 002209 789 ARSGAYN-RTLTPFGFQNE---DRTLW--EA----TSTY---------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTM 849 (953)
Q Consensus 789 ~~~~~~d-~~~~~~~~~~~---~~~~~--~~----~~~~---------~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~ 849 (953)
+++|+.+ .......+... ....+ .. ...| ...+|+...-+...|+||+||++|..+ .
T Consensus 183 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~----~ 258 (313)
T 2wir_A 183 LIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLR----D 258 (313)
T ss_dssp EESCCCCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTH----H
T ss_pred EEcCccCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcCh----H
Confidence 9999887 32211000000 00000 00 0001 012444211112359999999999874 5
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhcc
Q 002209 850 QSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 850 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (953)
++..++++++..+.++++++++|++|.+.. .+....+.+.+.+||.++++
T Consensus 259 ~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 259 EGELYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999998752 23456788899999988753
No 74
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.80 E-value=3.7e-18 Score=187.97 Aligned_cols=234 Identities=17% Similarity=0.140 Sum_probs=163.2
Q ss_pred ceEEE-EEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 638 QKELI-KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 638 ~~~~~-~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
..+.+ .+...+|..+.++++.|.+ .+.|+||++||+.... . ........|+++||.|+
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~-----------~----~~~~~~~~l~~~g~~vi 91 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHS-----------G----RYEELARMLMGLDLLVF 91 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------G----GGHHHHHHHHTTTEEEE
T ss_pred ccccCceEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCccc-----------c----hHHHHHHHHHhCCCeEE
Confidence 33444 6788899999999998863 2479999999963211 0 11245667788899999
Q ss_pred EcCCCCCCCCCChhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 717 GGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
.+|+ +|+|.+... .......++|+.++++++... .+..+++|+|||+||.+++.++.++|++++++|+++|.
T Consensus 92 ~~D~---~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 166 (342)
T 3hju_A 92 AHDH---VGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPL 166 (342)
T ss_dssp EECC---TTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCC
T ss_pred EEcC---CCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcc
Confidence 9555 577776432 233567789999999999877 34569999999999999999999999999999999987
Q ss_pred CCCCCCCcC------------------ccccc-ch---hhhhHHHHHh---------------------cCcccccCCCC
Q 002209 794 YNRTLTPFG------------------FQNED-RT---LWEATSTYVE---------------------MSPFMSANKLK 830 (953)
Q Consensus 794 ~d~~~~~~~------------------~~~~~-~~---~~~~~~~~~~---------------------~sp~~~~~~i~ 830 (953)
......... ..... .. .......+.. ......+.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (342)
T 3hju_A 167 VLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLT 246 (342)
T ss_dssp CSCCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCC
T ss_pred cccchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 653211000 00000 00 0000000000 01124467789
Q ss_pred CcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc--ccHHHHHHHHHHHHHHhccCC
Q 002209 831 KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR--ESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 831 ~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~l~~~ 901 (953)
+|+|+++|++|..++ ++.+.++++.+.. ..+++++++++||.+... +....++..+++||++++...
T Consensus 247 ~Pvlii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (342)
T 3hju_A 247 VPFLLLQGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 315 (342)
T ss_dssp SCEEEEEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCEEEEEeCCCcccC--hHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCCC
Confidence 999999999999998 8888888887753 257999999999987432 224567788999999998643
No 75
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.79 E-value=2.1e-18 Score=188.30 Aligned_cols=237 Identities=20% Similarity=0.192 Sum_probs=163.4
Q ss_pred CCCceEEEEEEcCCCc-EEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cC
Q 002209 635 ASLQKELIKYQRKDGV-QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RG 712 (953)
Q Consensus 635 ~~~~~~~~~~~~~dg~-~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G 712 (953)
..+..+.+++.+.+|. .+.+++|.|++. .++.|+||++|||.+..+ ....+ ......|++ .|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~~~g--------~~~~~----~~~~~~la~~~G 110 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIG--------TAESS----DPFCVEVARELG 110 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSC--------CGGGG----HHHHHHHHHHHC
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCccccC--------Chhhh----HHHHHHHHHhcC
Confidence 3456788999988887 899999999741 235899999999753221 11111 234556776 59
Q ss_pred cEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----ccc
Q 002209 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPH----LFC 785 (953)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~ 785 (953)
|.|+.+|++ |.|.+. +...+.|+.++++|+.+. ..+|+++|+|+|||+||++++.++.+.++ .++
T Consensus 111 ~~Vv~~d~r---g~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 111 FAVANVEYR---LAPETT-----FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CEEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred cEEEEecCC---CCCCCC-----CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 999996664 555442 234577888999998774 23678899999999999999999988654 499
Q ss_pred EEEEcccCCCCCCCCcCccc-ccchhhh------hHHHHH--------------hcCcccccCCCC--CcEEEEEeCCCC
Q 002209 786 CGIARSGAYNRTLTPFGFQN-EDRTLWE------ATSTYV--------------EMSPFMSANKLK--KPILLVHGEEDN 842 (953)
Q Consensus 786 a~v~~~~~~d~~~~~~~~~~-~~~~~~~------~~~~~~--------------~~sp~~~~~~i~--~P~Li~~G~~D~ 842 (953)
++|+++|+.+.......+.. .....+. ....|. ..+|+.. ..+. +|+||+||++|.
T Consensus 183 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~ 261 (323)
T 1lzl_A 183 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDP 261 (323)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCT
T ss_pred EEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCC
Confidence 99999998775432100000 0000000 001111 1122221 1232 699999999998
Q ss_pred CCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc---ccHHHHHHHHHHHHHHhccC
Q 002209 843 NSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR---ESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 843 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~~l~~ 900 (953)
. ..++.+++++++..|+++++++|||++|++... +....+.+.+.+||.+++..
T Consensus 262 ~----~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 262 L----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp T----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred c----hHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 6 467889999999999999999999999986422 23567889999999998853
No 76
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.79 E-value=3.4e-18 Score=180.50 Aligned_cols=205 Identities=17% Similarity=0.156 Sum_probs=152.9
Q ss_pred CceEEEEEEcC--CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcE
Q 002209 637 LQKELIKYQRK--DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (953)
Q Consensus 637 ~~~~~~~~~~~--dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (953)
+..+.+++... +|.. .+.+|+|... . +++.|+||++||..... ..| ......|+++||.
T Consensus 23 ~~~~~~~~~~~~~~~~~-~~~l~~p~~~-~--~~~~p~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~ 83 (262)
T 1jfr_A 23 YATSQTSVSSLVASGFG-GGTIYYPTST-A--DGTFGAVVISPGFTAYQ-----------SSI----AWLGPRLASQGFV 83 (262)
T ss_dssp SCEEEEEECTTTCSSSC-CEEEEEESCC-T--TCCEEEEEEECCTTCCG-----------GGT----TTHHHHHHTTTCE
T ss_pred CCccceEecceeccCCC-ceeEEecCCC-C--CCCCCEEEEeCCcCCCc-----------hhH----HHHHHHHHhCCCE
Confidence 34566666654 3332 4677888652 1 23589999999963111 111 2346678889999
Q ss_pred EEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEc
Q 002209 715 ILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVR----RGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (953)
Q Consensus 715 V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (953)
|+.+++ +|+|.+. .....|+.++++++.+ ...++.++++|+||||||.+++.++.++|+ ++++|++
T Consensus 84 v~~~d~---~g~g~~~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~ 153 (262)
T 1jfr_A 84 VFTIDT---NTTLDQP------DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPL 153 (262)
T ss_dssp EEEECC---SSTTCCH------HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEE
T ss_pred EEEeCC---CCCCCCC------chhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEee
Confidence 999666 4666542 2345678888999987 445677899999999999999999999987 9999998
Q ss_pred ccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHH-HHHHHHHHHhCCCcEEEEE
Q 002209 791 SGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHGALCRLVI 869 (953)
Q Consensus 791 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~ 869 (953)
+|... ...+.++++|+|++||++|..++ ++. ++++++.++ .+.++++++
T Consensus 154 ~p~~~---------------------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~l~-~~~~~~~~~ 203 (262)
T 1jfr_A 154 TGWNT---------------------------DKTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLP-GSLDKAYLE 203 (262)
T ss_dssp SCCCS---------------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSC-TTSCEEEEE
T ss_pred cccCc---------------------------cccccccCCCEEEEecCccccCC--chhhHHHHHHHhh-cCCCceEEE
Confidence 87532 23445678999999999999998 888 999999884 356789999
Q ss_pred eCCCCccCCCcccHHHHHHHHHHHHHHhccCC
Q 002209 870 LPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 870 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
+++++|.+.. +....+.+.+.+||+++++..
T Consensus 204 ~~~~~H~~~~-~~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 204 LRGASHFTPN-TSDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp ETTCCTTGGG-SCCHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCcCCcc-cchHHHHHHHHHHHHHHhcCc
Confidence 9999998753 344678899999999998654
No 77
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.79 E-value=2.1e-18 Score=188.03 Aligned_cols=229 Identities=17% Similarity=0.137 Sum_probs=152.3
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (953)
...+.+++ +|..+ |.|++. . ...|+||++|||.+..+ +... .......|++ .||+|
T Consensus 58 ~~~~~~~~---~g~~~----~~p~~~--~--~~~~~vv~~HGgg~~~g--------~~~~----~~~~~~~la~~~g~~v 114 (322)
T 3k6k_A 58 VELTLTDL---GGVPC----IRQATD--G--AGAAHILYFHGGGYISG--------SPST----HLVLTTQLAKQSSATL 114 (322)
T ss_dssp CEEEEEEE---TTEEE----EEEECT--T--CCSCEEEEECCSTTTSC--------CHHH----HHHHHHHHHHHHTCEE
T ss_pred ceEEEEEE---CCEeE----EecCCC--C--CCCeEEEEEcCCcccCC--------ChHH----HHHHHHHHHHhcCCEE
Confidence 33444444 66555 456541 1 12455999999753221 1011 1223455665 49999
Q ss_pred EEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----ccEEEEcc
Q 002209 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARS 791 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~ 791 (953)
+.+++++. +.. .+...++|+.++++|+.++ .+|+++|+|+|+|+||.+|+.++.+.|+. ++++|+++
T Consensus 115 ~~~dyr~~---~~~-----~~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~ 185 (322)
T 3k6k_A 115 WSLDYRLA---PEN-----PFPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLS 185 (322)
T ss_dssp EEECCCCT---TTS-----CTTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEES
T ss_pred EEeeCCCC---CCC-----CCchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEec
Confidence 99777543 222 1245678999999999887 46889999999999999999999987654 99999999
Q ss_pred cCCCCCCCCcCcccc-cc-------hhhhhHHHHH--------hcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHH
Q 002209 792 GAYNRTLTPFGFQNE-DR-------TLWEATSTYV--------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (953)
Q Consensus 792 ~~~d~~~~~~~~~~~-~~-------~~~~~~~~~~--------~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~ 855 (953)
|+.+.......+... .. ........|. ..+|+....+...|+||+||++|.. ..++.+++
T Consensus 186 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~----~~~~~~~~ 261 (322)
T 3k6k_A 186 PFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL----LSDSTTLA 261 (322)
T ss_dssp CCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT----HHHHHHHH
T ss_pred CCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc----HHHHHHHH
Confidence 988754322111000 00 0000011111 1244443333457999999999976 57889999
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhccCC
Q 002209 856 NALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 856 ~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
++++..|+++++++||+++|.+.. .+....+.+.+.+||.++++..
T Consensus 262 ~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 262 ERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp HHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998743 2346688899999999998654
No 78
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.79 E-value=6.2e-17 Score=177.17 Aligned_cols=301 Identities=10% Similarity=0.014 Sum_probs=193.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccc---------cceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCcee
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARP---------EEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~ 180 (953)
.+..++|||||+.+++............... ......+.+++++....... .+.|.+|++..........
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~ 89 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVS 89 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSE
T ss_pred ceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeee
Confidence 4667889999999987765432222111111 12234566666654444333 5789999996433222222
Q ss_pred eeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeec--ccCCCccccccccceEEecCCeEE
Q 002209 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNNSTLL 258 (953)
Q Consensus 181 ~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l--t~~~~~~~~~~~~~~~wspDg~~l 258 (953)
.+........+....|+|||+.|+.... ...|.++++++++.... ...... .+..+.|+|||+.|
T Consensus 90 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l 156 (337)
T 1gxr_A 90 QLDCLNRDNYIRSCKLLPDGCTLIVGGE---------ASTLSIWDLAAPTPRIKAELTSSAP----ACYALAISPDSKVC 156 (337)
T ss_dssp EEECSCTTSBEEEEEECTTSSEEEEEES---------SSEEEEEECCCC--EEEEEEECSSS----CEEEEEECTTSSEE
T ss_pred cccccCCCCcEEEEEEcCCCCEEEEEcC---------CCcEEEEECCCCCcceeeecccCCC----ceEEEEECCCCCEE
Confidence 2221123347889999999999988652 56888999988763222 111221 16689999999998
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-Cccc
Q 002209 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYT 335 (953)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~ 335 (953)
+... ..+.|.++++ +++. ..+... ..+.
T Consensus 157 ~~~~-------------------------------------------------~dg~v~~~d~~~~~~~~~~~~~~~~i~ 187 (337)
T 1gxr_A 157 FSCC-------------------------------------------------SDGNIAVWDLHNQTLVRQFQGHTDGAS 187 (337)
T ss_dssp EEEE-------------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEEe-------------------------------------------------CCCcEEEEeCCCCceeeeeecccCceE
Confidence 8761 2245778888 6654 344433 7788
Q ss_pred ccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 336 ~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
.++|+|||++|+....+ +.|.+||+..+......... ..+..++|+|||+.++.
T Consensus 188 ~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGLD-------------NTVRSWDLREGRQLQQHDFT-------------SQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp EEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEecC-------------CcEEEEECCCCceEeeecCC-------------CceEEEEECCCCCEEEE
Confidence 99999999999988744 38999999866544332221 23467899999997776
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCc
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP 495 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 495 (953)
. +..+.++++++ ..++...+..+...+..+.|+|||+.|+....++ .+.++++.++ +.
T Consensus 242 ~-------------~~~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~--~~ 299 (337)
T 1gxr_A 242 G-------------MESSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYG--AS 299 (337)
T ss_dssp E-------------ETTSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC--CE
T ss_pred E-------------cCCCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCEEEEecCCC----cEEEEECCCC--eE
Confidence 6 34567899996 5555555666667788899999999988776543 5666777664 22
Q ss_pred EEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 496 RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 496 ~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
..... ....+.. +.|+|||++|+...
T Consensus 300 ~~~~~-~~~~v~~------~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 300 IFQSK-ESSSVLS------CDISVDDKYIVTGS 325 (337)
T ss_dssp EEEEE-CSSCEEE------EEECTTSCEEEEEE
T ss_pred EEEec-CCCcEEE------EEECCCCCEEEEec
Confidence 22221 2222222 78999999988776
No 79
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.79 E-value=1.5e-17 Score=176.32 Aligned_cols=220 Identities=17% Similarity=0.137 Sum_probs=150.0
Q ss_pred CceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCc---cchHHHHHHHc-
Q 002209 637 LQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRI---GSTSVLLWLAR- 711 (953)
Q Consensus 637 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~la~~- 711 (953)
...+.+++.+. +|..+.+++|+|+++.+.+ ++|+||++||+..... .|... .......|+++
T Consensus 30 g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~--~~P~vv~lHG~g~~~~-----------~~~~~~~~~~~~~~~l~~~g 96 (268)
T 1jjf_A 30 GQVVNISYFSTATNSTRPARVYLPPGYSKDK--KYSVLYLLHGIGGSEN-----------DWFEGGGRANVIADNLIAEG 96 (268)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTCCTTS--CBCEEEEECCTTCCTT-----------TTTTTTTCHHHHHHHHHHTT
T ss_pred ceEEEEEEeccccCCceEEEEEeCCCCCCCC--CccEEEEECCCCCCcc-----------hhhhccccHHHHHHHHHHcC
Confidence 45677788764 5788999999999875533 5999999999742211 12111 11234566765
Q ss_pred ---CcEEEEcCCCCCCCCCChhhhhhhHHHHHHH-HHHHHHHHHHcCCC--CCCcEEEEEeChHHHHHHHHHHhCCCccc
Q 002209 712 ---GFAILGGPTTPIIGEGDEEANDRFVEQLVAC-AEAAVEEVVRRGVA--HPSKIAVGGHSYGAFMTANLLAHAPHLFC 785 (953)
Q Consensus 712 ---G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~--d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 785 (953)
||+|+.+++++. +.... ..+ .....+ +.++++++.++..+ |+++++|+|+||||++++.++.++|++|+
T Consensus 97 ~~~~~~vv~~d~~~~---~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 171 (268)
T 1jjf_A 97 KIKPLIIVTPNTNAA---GPGIA-DGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFA 171 (268)
T ss_dssp SSCCCEEEEECCCCC---CTTCS-CHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCS
T ss_pred CCCCEEEEEeCCCCC---Ccccc-ccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhh
Confidence 599999777543 22111 111 222233 44566677665444 78999999999999999999999999999
Q ss_pred EEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCC-cEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCc
Q 002209 786 CGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL 864 (953)
Q Consensus 786 a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~-P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 864 (953)
++++++|..+..... ..+.... .....+. |+|++||+.|..+| . +++++++|++.|++
T Consensus 172 ~~v~~s~~~~~~~~~--------~~~~~~~---------~~~~~~~pp~li~~G~~D~~v~--~--~~~~~~~l~~~g~~ 230 (268)
T 1jjf_A 172 YIGPISAAPNTYPNE--------RLFPDGG---------KAAREKLKLLFIACGTNDSLIG--F--GQRVHEYCVANNIN 230 (268)
T ss_dssp EEEEESCCTTSCCHH--------HHCTTTT---------HHHHHHCSEEEEEEETTCTTHH--H--HHHHHHHHHHTTCC
T ss_pred heEEeCCCCCCCchh--------hhcCcch---------hhhhhcCceEEEEecCCCCCcc--H--HHHHHHHHHHCCCc
Confidence 999999976532100 0000000 0011224 59999999999875 3 77899999999999
Q ss_pred EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 865 CRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 865 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
++++++|+++|.+. .....+..+++||.++.
T Consensus 231 ~~~~~~~g~~H~~~---~~~~~~~~~~~~l~~~~ 261 (268)
T 1jjf_A 231 HVYWLIQGGGHDFN---VWKPGLWNFLQMADEAG 261 (268)
T ss_dssp CEEEEETTCCSSHH---HHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCCCCcCHh---HHHHHHHHHHHHHHhcC
Confidence 99999999999873 23455678899998874
No 80
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.79 E-value=1.8e-19 Score=194.97 Aligned_cols=209 Identities=16% Similarity=0.153 Sum_probs=147.3
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEc
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (953)
...+.|. +..+...+|.|.+. .++.|+||++|||.+..+.. ..+ ...+..|+++||+|+.+
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~----~~~~p~vv~~HGgg~~~~~~--------~~~----~~~~~~l~~~G~~v~~~ 118 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT----TNQAPLFVFVHGGYWQEMDM--------SMS----CSIVGPLVRRGYRVAVM 118 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC----CTTCCEEEEECCSTTTSCCG--------GGS----CTTHHHHHHTTCEEEEE
T ss_pred eeeeccC---CCCcEEEEEecCCC----CCCCCEEEEECCCcCcCCCh--------hHH----HHHHHHHHhCCCEEEEe
Confidence 3455554 33456778888641 23589999999975433211 111 12356788999999997
Q ss_pred CCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCC-------cccEEEEc
Q 002209 719 PTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPH-------LFCCGIAR 790 (953)
Q Consensus 719 ~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-------~~~a~v~~ 790 (953)
+++ |.+.. .....+.|+.++++++.+. ...+.++|+|+||||||++++.++.+.+. +++++|++
T Consensus 119 d~r---~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~ 190 (303)
T 4e15_A 119 DYN---LCPQV-----TLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFL 190 (303)
T ss_dssp CCC---CTTTS-----CHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEE
T ss_pred cCC---CCCCC-----ChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEE
Confidence 775 33332 2356788999999999773 23457899999999999999999986542 79999999
Q ss_pred ccCCCCCCCCcCc-ccccchhhhhHHHHHhcCcc-cccCCC----CCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCc
Q 002209 791 SGAYNRTLTPFGF-QNEDRTLWEATSTYVEMSPF-MSANKL----KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL 864 (953)
Q Consensus 791 ~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~sp~-~~~~~i----~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 864 (953)
+|+++........ ...........+.+...+|+ ..+..+ ++|+||+||++|..|+ ..++.+++++++..|.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~ 268 (303)
T 4e15_A 191 CGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTF--IEQSRHYADVLRKKGYK 268 (303)
T ss_dssp SCCCCCHHHHTCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHH--HHHHHHHHHHHHHHTCC
T ss_pred eeeeccHhhhcccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCc--hHHHHHHHHHHHHCCCc
Confidence 9987742211000 00011111122334556777 566655 8999999999999988 99999999999999999
Q ss_pred EEEEEeCCCCcc
Q 002209 865 CRLVILPFESHG 876 (953)
Q Consensus 865 ~~~~~~~~~~H~ 876 (953)
++++++|+++|.
T Consensus 269 ~~~~~~~g~~H~ 280 (303)
T 4e15_A 269 ASFTLFKGYDHF 280 (303)
T ss_dssp EEEEEEEEEETT
T ss_pred eEEEEeCCCCch
Confidence 999999999994
No 81
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=3.5e-17 Score=175.27 Aligned_cols=270 Identities=14% Similarity=0.137 Sum_probs=183.7
Q ss_pred CCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhh
Q 002209 216 SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTF 295 (953)
Q Consensus 216 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (953)
.....|+++|+++++.+.+...... +..++|+|||+.|++.
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~~---------------------------------- 59 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPEL-----FEAPNWSPDGKYLLLN---------------------------------- 59 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSC-----CEEEEECTTSSEEEEE----------------------------------
T ss_pred CcceeEEEEeCCCCceeeeccCCcc-----eEeeEECCCCCEEEEE----------------------------------
Confidence 3467899999999988877665432 6789999999999976
Q ss_pred hhhcCCcchhhhhhhhccceEEEEEc-C-CceeEeCCC---CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEE
Q 002209 296 QDLLKDEYDEDLFDYYATTQLVLVSL-D-GTVKEIGPP---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (953)
Q Consensus 296 ~~~~~~~~d~~~~~~~~~~~l~~~~~-~-g~~~~l~~~---~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~ 370 (953)
....|+++++ + ++...+... ..+..++|||||++|++...... ....||.
T Consensus 60 ----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---------~~~~l~~ 114 (297)
T 2ojh_A 60 ----------------SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---------GKSAIYL 114 (297)
T ss_dssp ----------------ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---------SSCEEEE
T ss_pred ----------------cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---------CcceEEE
Confidence 2357889999 7 777776643 45678999999999999884321 1237888
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE
Q 002209 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (953)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~ 450 (953)
++++++..+.+.... ....++|+|||+.++|.... +..-.||.+++ .+++...
T Consensus 115 ~~~~~~~~~~~~~~~--------------~~~~~~~spdg~~l~~~~~~----------~~~~~l~~~~~---~~~~~~~ 167 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNL--------------PSYWHGWSPDGKSFTYCGIR----------DQVFDIYSMDI---DSGVETR 167 (297)
T ss_dssp EETTCCCCEECCSSS--------------SEEEEEECTTSSEEEEEEEE----------TTEEEEEEEET---TTCCEEE
T ss_pred EECCCCceEEeecCC--------------CccceEECCCCCEEEEEECC----------CCceEEEEEEC---CCCcceE
Confidence 888877666655432 13467899999988876322 12236777774 5666666
Q ss_pred EeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeee
Q 002209 451 LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (953)
Q Consensus 451 l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~ 530 (953)
+......+..+.|+|||+.|++....+. ..+||.++..++ ....+.... ..+.. +.|+|||++|++...+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~i~~~~~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTG-QMQIWRVRVDGS--SVERITDSA-YGDWF------PHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTSS--CEEECCCCS-EEEEE------EEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCCC-CccEEEECCCCC--CcEEEecCC-cccCC------eEECCCCCEEEEEEcC
Confidence 7666667788999999999998875432 358999997764 333333222 11222 7899999999998754
Q ss_pred ccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecC
Q 002209 531 ENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESK 605 (953)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 605 (953)
.... ..+......|++||+.+++.+.+....+. .......+|+|||+.+++.....
T Consensus 238 ~~~~----------~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVF----------DHPRDLDVRVQLMDMDGGNVETLFDLFGG---------QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCC----------SCCSSEEEEEEEEETTSCSCEEEEEEEES---------TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCC----------cccccCceEEEEEecCCCCceeeeccCCC---------CcccccceECCCCCEEEEEEecc
Confidence 3100 00000124699999999887776542211 01112367999999998877654
No 82
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.78 E-value=2.6e-18 Score=181.39 Aligned_cols=242 Identities=14% Similarity=0.026 Sum_probs=154.8
Q ss_pred CceEEEEEEcC-CCcEEEEEEEcCCCCCC--CCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCc
Q 002209 637 LQKELIKYQRK-DGVQLSATLYLPPGYDP--SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (953)
Q Consensus 637 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~--~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (953)
|..+.+++.+. .|..+.+++|+|++++. ..++++|+||++||+.... ..+.... .....+.+.||
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~-----------~~~~~~~-~~~~~~~~~~~ 72 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH-----------NSWLKRT-NVERLLRGTNL 72 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCT-----------THHHHHS-CHHHHTTTCCC
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH-----------HHHHhcc-CHHHHHhcCCe
Confidence 55677777754 67899999999987621 1124589999999964211 1111000 11222345799
Q ss_pred EEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+|+.+++.+. ++........+.....+|+...++.+..+..+|+++++|+|||+||++++.++. +|++|+++|+++|.
T Consensus 73 ~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~ 150 (263)
T 2uz0_A 73 IVVMPNTSNG-WYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGA 150 (263)
T ss_dssp EEEECCCTTS-TTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCC
T ss_pred EEEEECCCCC-ccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCC
Confidence 9998665322 221111122334556677777776654423467889999999999999999999 88999999999998
Q ss_pred CCCCCCCcCcccc-cchhhh------hHHHHHhcCcccccCCCC--CcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCc
Q 002209 794 YNRTLTPFGFQNE-DRTLWE------ATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL 864 (953)
Q Consensus 794 ~d~~~~~~~~~~~-~~~~~~------~~~~~~~~sp~~~~~~i~--~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 864 (953)
.+........... ....+. ....+...+|...+.++. +|+|++||+.|..+ ..+++++++++..+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v----~~~~~~~~~l~~~g~~ 226 (263)
T 2uz0_A 151 LSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY----EANNLAVKNLKKLGFD 226 (263)
T ss_dssp CCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH----HHHHHHHHHHHHTTCE
T ss_pred cchhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhh----HHHHHHHHHHHHCCCC
Confidence 7654321100000 000000 001122334555556664 79999999999875 4578999999999999
Q ss_pred EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccC
Q 002209 865 CRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 865 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
+++++++| +|.+. ........+++||.++++.
T Consensus 227 ~~~~~~~g-~H~~~---~~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 227 VTYSHSAG-THEWY---YWEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp EEEEEESC-CSSHH---HHHHHHHHHHHHSSSCCCC
T ss_pred eEEEECCC-CcCHH---HHHHHHHHHHHHHHhhccc
Confidence 99999999 99763 2345678889999887753
No 83
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.78 E-value=3e-18 Score=185.36 Aligned_cols=193 Identities=19% Similarity=0.152 Sum_probs=148.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|.. .+.+|+|... .+.|+||++||+.... .........|+++||.|+.+|+ +|+
T Consensus 79 ~~g~~-~~~~~~p~~~-----~~~p~vv~~HG~~~~~---------------~~~~~~~~~la~~G~~vv~~d~---~g~ 134 (306)
T 3vis_A 79 ADGFG-GGTIYYPREN-----NTYGAIAISPGYTGTQ---------------SSIAWLGERIASHGFVVIAIDT---NTT 134 (306)
T ss_dssp CSSSC-CEEEEEESSC-----SCEEEEEEECCTTCCH---------------HHHHHHHHHHHTTTEEEEEECC---SST
T ss_pred cCCCc-ceEEEeeCCC-----CCCCEEEEeCCCcCCH---------------HHHHHHHHHHHhCCCEEEEecC---CCC
Confidence 34443 3577788752 2489999999953110 0112345678889999999665 566
Q ss_pred CChhhhhhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC
Q 002209 727 GDEEANDRFVEQLVACAEAAVEEVVRR------GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (953)
Q Consensus 727 G~~~~~~~~~~~~~~D~~~~~~~l~~~------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~ 800 (953)
|.+. .....|+.++++++.+. ..+|.++++|+|||+||.+++.++.++|+ ++++|+++|...
T Consensus 135 g~s~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~----- 202 (306)
T 3vis_A 135 LDQP------DSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL----- 202 (306)
T ss_dssp TCCH------HHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----
T ss_pred CCCc------chHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-----
Confidence 6652 23347888899999887 67888999999999999999999999987 999999887532
Q ss_pred cCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchH-HHHHHHHHHHhCCCcEEEEEeCCCCccCCC
Q 002209 801 FGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTM-QSDRFFNALKGHGALCRLVILPFESHGYAA 879 (953)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 879 (953)
...+.++++|+|++||++|..+| ++ ++.++++.++..+ +++++++++++|.+..
T Consensus 203 ----------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~ 257 (306)
T 3vis_A 203 ----------------------NKSWRDITVPTLIIGAEYDTIAS--VTLHSKPFYNSIPSPT-DKAYLELDGASHFAPN 257 (306)
T ss_dssp ----------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGG
T ss_pred ----------------------ccccccCCCCEEEEecCCCcccC--cchhHHHHHHHhccCC-CceEEEECCCCccchh
Confidence 12345678999999999999998 87 6999999888765 7999999999998743
Q ss_pred cccHHHHHHHHHHHHHHhccCC
Q 002209 880 RESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 880 ~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
+....+.+.+.+||+++++..
T Consensus 258 -~~~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 258 -ITNKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp -SCCHHHHHHHHHHHHHHHSCC
T ss_pred -hchhHHHHHHHHHHHHHccCc
Confidence 334678889999999998754
No 84
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.78 E-value=2.2e-18 Score=187.15 Aligned_cols=231 Identities=19% Similarity=0.187 Sum_probs=158.3
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc-CcEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAI 715 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V 715 (953)
...+.+++++.+| .+.+++|.|.+ ..+.|+||++||+.+.. +....+ ......|+++ ||.|
T Consensus 46 ~~~~~~~i~~~~g-~i~~~~~~p~~-----~~~~p~vv~~HGgg~~~--------g~~~~~----~~~~~~la~~~g~~v 107 (311)
T 2c7b_A 46 AETRDVHIPVSGG-SIRARVYFPKK-----AAGLPAVLYYHGGGFVF--------GSIETH----DHICRRLSRLSDSVV 107 (311)
T ss_dssp SEEEEEEEEETTE-EEEEEEEESSS-----CSSEEEEEEECCSTTTS--------CCTGGG----HHHHHHHHHHHTCEE
T ss_pred ceEEEEEecCCCC-cEEEEEEecCC-----CCCCcEEEEECCCcccC--------CChhhh----HHHHHHHHHhcCCEE
Confidence 4578889998887 89999999975 22479999999974321 111111 2345567765 9999
Q ss_pred EEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----cccEEE
Q 002209 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCCGI 788 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~a~v 788 (953)
+.+|++ |.|.+. +.....|+.++++++.+.. .+|+++++|+|||+||++++.++.++|+ .++++|
T Consensus 108 ~~~d~r---g~g~~~-----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 179 (311)
T 2c7b_A 108 VSVDYR---LAPEYK-----FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQV 179 (311)
T ss_dssp EEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEE
T ss_pred EEecCC---CCCCCC-----CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEE
Confidence 996664 555442 2345778889999987752 3677899999999999999999987765 599999
Q ss_pred EcccCCCCCCCCc-----------CcccccchhhhhHHHH---------HhcCcccc-cCCCCCcEEEEEeCCCCCCCCc
Q 002209 789 ARSGAYNRTLTPF-----------GFQNEDRTLWEATSTY---------VEMSPFMS-ANKLKKPILLVHGEEDNNSGTL 847 (953)
Q Consensus 789 ~~~~~~d~~~~~~-----------~~~~~~~~~~~~~~~~---------~~~sp~~~-~~~i~~P~Li~~G~~D~~v~~~ 847 (953)
+++|+.+...... .+.......|- ...| ...+|+.. +..+. |+||+||+.|..+
T Consensus 180 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~l~~~~-P~lii~G~~D~~~--- 254 (311)
T 2c7b_A 180 LIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWF-GRQYLKRPEEAYDFKASPLLADLGGLP-PALVVTAEYDPLR--- 254 (311)
T ss_dssp EESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHH-HHHHCSSTTGGGSTTTCGGGSCCTTCC-CEEEEEETTCTTH---
T ss_pred EECCccCCccccccCCccHHHhccCCCCHHHHHHH-HHHhCCCCccccCcccCcccccccCCC-cceEEEcCCCCch---
Confidence 9999877311000 00000000000 0001 01233322 23333 9999999999875
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhcc
Q 002209 848 TMQSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 848 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (953)
.++..++++++..+.+++++++++++|.+.. .+....+.+.+.+||.+++.
T Consensus 255 -~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 255 -DEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp -HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 3567788999999999999999999998752 24457788999999999874
No 85
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.78 E-value=3.2e-18 Score=189.66 Aligned_cols=238 Identities=15% Similarity=0.074 Sum_probs=161.4
Q ss_pred CCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEE
Q 002209 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (953)
Q Consensus 636 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (953)
.+..+.+++...+|..+.+++|.|.+. . ++.|+||++|||.+..+ ... ..........|+++||+|
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~--~--~~~p~vv~iHGgg~~~g--------~~~--~~~~~~~~~~la~~g~~v 144 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGV--E--GVLPGLVYTHGGGMTIL--------TTD--NRVHRRWCTDLAAAGSVV 144 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTC--C--SCEEEEEEECCSTTTSS--------CSS--SHHHHHHHHHHHHTTCEE
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCC--C--CCCeEEEEEcCCccccC--------CCc--ccchhHHHHHHHhCCCEE
Confidence 345677888888888999999999752 1 25899999999753321 111 001123456778899999
Q ss_pred EEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-----CCCcccEE
Q 002209 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH-----APHLFCCG 787 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~-----~p~~~~a~ 787 (953)
+.+++++..|. . +...+...+.|+.++++|+.++. .+| +|+|+|||+||.+++.++.. .|++|+++
T Consensus 145 v~~d~r~~gg~---~-~~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~ 218 (361)
T 1jkm_A 145 VMVDFRNAWTA---E-GHHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGV 218 (361)
T ss_dssp EEEECCCSEET---T-EECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEE
T ss_pred EEEecCCCCCC---C-CCCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceE
Confidence 99777544322 1 11223556789999999998752 344 99999999999999999998 77789999
Q ss_pred EEcccCCCCCCC---------CcCcccccchhhh--hH----HHHH---------hcCcc----cccCCCCCcEEEEEeC
Q 002209 788 IARSGAYNRTLT---------PFGFQNEDRTLWE--AT----STYV---------EMSPF----MSANKLKKPILLVHGE 839 (953)
Q Consensus 788 v~~~~~~d~~~~---------~~~~~~~~~~~~~--~~----~~~~---------~~sp~----~~~~~i~~P~Li~~G~ 839 (953)
|+++|+.+.... ...+.......+. .. ..|. ..+|+ ..+.++. |+||+||+
T Consensus 219 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~ 297 (361)
T 1jkm_A 219 YASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNE 297 (361)
T ss_dssp EEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEET
T ss_pred EEECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcC
Confidence 999998775210 0000000000000 00 0010 12333 2235565 99999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCC-C----cccH-HHHHHHHHHHHHHhc
Q 002209 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA-A----RESI-MHVLWETDRWLQKYC 898 (953)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~-~----~~~~-~~~~~~i~~fl~~~l 898 (953)
+|..+ .++.+++++++..+.+++++++++++|.+. . .+.. ..+.+.+.+||+++.
T Consensus 298 ~D~~~----~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 298 LDPLR----DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp TCTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcch----hhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99875 378899999999999999999999999874 2 1333 677889999998764
No 86
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.78 E-value=1.8e-18 Score=207.77 Aligned_cols=245 Identities=19% Similarity=0.219 Sum_probs=164.4
Q ss_pred EcCCCcE--EEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcC---------C--------CC-----------------
Q 002209 645 QRKDGVQ--LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKD---------A--------AG----------------- 688 (953)
Q Consensus 645 ~~~dg~~--~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~---------~--------~~----------------- 688 (953)
+..||.+ |.+.+|+|++ .+++|+||..||....... . .+
T Consensus 179 ~~~DG~~d~L~a~l~~P~~-----~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 253 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS-----TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAK 253 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC-----SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC-----CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccc
Confidence 3579998 9999999986 2369999988763211100 0 00
Q ss_pred ---cccCCCCCCCCc-cchHHHHHHHcCcEEEEcCCCCCCCCCChhhh-hhhHHHHHHHHHHHHHHHHHc----------
Q 002209 689 ---QVRGSPNEFPRI-GSTSVLLWLARGFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRR---------- 753 (953)
Q Consensus 689 ---~~~~~~~~~~~~-~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~~~~~l~~~---------- 753 (953)
+...+...|... .......|+++||+|+.+|. +|+|.+.+. ..+....++|+.++++||..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~---RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 254 ELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAG---VGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECC---TTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccccchhccccccccchHHHHHHCCCEEEEECC---CcCCCCCCcCCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 000000111110 12345789999999999555 566666442 223346789999999999843
Q ss_pred -----CCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC---------CCcCccccc---------chh
Q 002209 754 -----GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL---------TPFGFQNED---------RTL 810 (953)
Q Consensus 754 -----~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~---------~~~~~~~~~---------~~~ 810 (953)
++ +..||+++|+||||++++.+|+.+|+.++|+|+.+|+.++.. ...++.... ...
T Consensus 331 ~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~ 409 (763)
T 1lns_A 331 HEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN 409 (763)
T ss_dssp CEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG
T ss_pred ccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh
Confidence 32 356999999999999999999999999999999998764210 000111000 000
Q ss_pred h------------hh----------------HHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCC
Q 002209 811 W------------EA----------------TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG 862 (953)
Q Consensus 811 ~------------~~----------------~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g 862 (953)
+ .. .+.+...++...+++|++|+|++||..|.+|| +.++.+++++++. +
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp--~~~a~~l~~al~~-~ 486 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-G 486 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-T
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCC--hHHHHHHHHhhcc-C
Confidence 0 00 01233456778889999999999999999998 9999999999987 6
Q ss_pred CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccCCC
Q 002209 863 ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 863 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (953)
.+.++++. +++|..........+.+.+.+||++||+..+
T Consensus 487 ~~~~l~i~-~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~~ 525 (763)
T 1lns_A 487 HAKHAFLH-RGAHIYMNSWQSIDFSETINAYFVAKLLDRD 525 (763)
T ss_dssp CCEEEEEE-SCSSCCCTTBSSCCHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEEe-CCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 67777664 5689864322233467899999999998654
No 87
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.78 E-value=1.2e-17 Score=170.60 Aligned_cols=186 Identities=16% Similarity=0.103 Sum_probs=138.5
Q ss_pred CCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH--cCcEEEEcCCC----------------CCCCCCCh
Q 002209 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPTT----------------PIIGEGDE 729 (953)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~V~~~~~~----------------~~~G~G~~ 729 (953)
++.|+||++||.... ...| ......|++ +||.|+.++.. +..|+|.+
T Consensus 12 ~~~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 76 (218)
T 1auo_A 12 PADACVIWLHGLGAD-----------RYDF----MPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPA 76 (218)
T ss_dssp CCSEEEEEECCTTCC-----------TTTT----HHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSS
T ss_pred CCCcEEEEEecCCCC-----------hhhH----HHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcc
Confidence 358999999996311 1111 234556777 99999997653 33455543
Q ss_pred hh-hhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCcccEEEEcccCCCCCCCCcCccccc
Q 002209 730 EA-NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA-HAPHLFCCGIARSGAYNRTLTPFGFQNED 807 (953)
Q Consensus 730 ~~-~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 807 (953)
.. .........+|+..+++++.+ ..++.++++++|||+||.+++.++. ++|++++++|+++|...... +..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~----~~~-- 149 (218)
T 1auo_A 77 RSISLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG----DEL-- 149 (218)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC----TTC--
T ss_pred cccchHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch----hhh--
Confidence 22 122345667788888888776 4477889999999999999999999 99999999999999765300 000
Q ss_pred chhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHH
Q 002209 808 RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVL 887 (953)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 887 (953)
......+++|+|++||++|..+| ++.++++++.++..+.++++++++ ++|.+. .+..
T Consensus 150 ---------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~ 206 (218)
T 1auo_A 150 ---------------ELSASQQRIPALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL-----PQEI 206 (218)
T ss_dssp ---------------CCCHHHHTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCC-----HHHH
T ss_pred ---------------hhhhcccCCCEEEEEeCCCceec--HHHHHHHHHHHHhCCCceEEEEec-CCCccC-----HHHH
Confidence 00113457899999999999998 999999999999988899999999 999874 2346
Q ss_pred HHHHHHHHHhc
Q 002209 888 WETDRWLQKYC 898 (953)
Q Consensus 888 ~~i~~fl~~~l 898 (953)
+.+.+||.+++
T Consensus 207 ~~~~~~l~~~l 217 (218)
T 1auo_A 207 HDIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 78899999876
No 88
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.77 E-value=2.2e-17 Score=171.02 Aligned_cols=215 Identities=17% Similarity=0.118 Sum_probs=153.4
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCC
Q 002209 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (953)
Q Consensus 643 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (953)
.+...+|. ..++|.|.+ +.|+||++||..... ..| ......|+++||.|+.+++
T Consensus 6 ~~~~~~g~--~~~~~~~~~-------~~~~vv~~hG~~~~~-----------~~~----~~~~~~l~~~G~~v~~~d~-- 59 (238)
T 1ufo_A 6 ERLTLAGL--SVLARIPEA-------PKALLLALHGLQGSK-----------EHI----LALLPGYAERGFLLLAFDA-- 59 (238)
T ss_dssp EEEEETTE--EEEEEEESS-------CCEEEEEECCTTCCH-----------HHH----HHTSTTTGGGTEEEEECCC--
T ss_pred cccccCCE--EEEEEecCC-------CccEEEEECCCcccc-----------hHH----HHHHHHHHhCCCEEEEecC--
Confidence 33444664 445677754 379999999963110 001 1123356778999999555
Q ss_pred CCCCCChhhhh-------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEE
Q 002209 723 IIGEGDEEAND-------------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIA 789 (953)
Q Consensus 723 ~~G~G~~~~~~-------------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~ 789 (953)
+|+|.+.... ......++|+.++++++.+++. ++++++|||+||.+++.++.++|+.++++++
T Consensus 60 -~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 135 (238)
T 1ufo_A 60 -PRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAF 135 (238)
T ss_dssp -TTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEE
T ss_pred -CCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEE
Confidence 5566553211 1245678899999999987653 6999999999999999999999998998888
Q ss_pred cccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCC-CCcEEEEEeCCCCCCCCchHHHHHHHHHHH-hCCC-cEE
Q 002209 790 RSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALK-GHGA-LCR 866 (953)
Q Consensus 790 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~-~~g~-~~~ 866 (953)
.++..........+. .+ .....+...++...+.++ ++|+|++||++|..+| .+.+.++++.++ ..+. +++
T Consensus 136 ~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~ 208 (238)
T 1ufo_A 136 IGSGFPMKLPQGQVV----ED-PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLA 208 (238)
T ss_dssp SCCSSCCCCCTTCCC----CC-HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTCCEE
T ss_pred ecCCccchhhhhhcc----CC-cccchhhcCChhhhhhhccCCcEEEEECCCCCccC--cHHHHHHHHHHhhcCCCCceE
Confidence 876543222111110 00 113445566777778888 8999999999999998 999999999999 7777 899
Q ss_pred EEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 867 LVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 867 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
++++++++|.+. .+..+.+.+||.++++
T Consensus 209 ~~~~~~~~H~~~-----~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 209 RFVEEGAGHTLT-----PLMARVGLAFLEHWLE 236 (238)
T ss_dssp EEEETTCCSSCC-----HHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcccH-----HHHHHHHHHHHHHHHh
Confidence 999999999874 2456788899998875
No 89
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.77 E-value=4.4e-17 Score=175.19 Aligned_cols=228 Identities=18% Similarity=0.174 Sum_probs=157.7
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCC
Q 002209 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (953)
Q Consensus 643 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (953)
.+...+|.++.++++.|.+ .+.|+||++||..... .. .......|+++||.|+.+|.
T Consensus 21 ~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~~-----------~~----~~~~~~~l~~~g~~v~~~d~-- 77 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEHS-----------GR----YEELARMLMGLDLLVFAHDH-- 77 (303)
T ss_dssp EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------GG----GHHHHHHHHHTTEEEEEECC--
T ss_pred eEecCCCeEEEEEEeccCC------CCCeEEEEECCCCchh-----------hH----HHHHHHHHHhCCCcEEEeCC--
Confidence 6778899999999998863 2379999999963211 11 12456678888999999554
Q ss_pred CCCCCChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC-
Q 002209 723 IIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL- 798 (953)
Q Consensus 723 ~~G~G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~- 798 (953)
+|+|.+.... ......++|+.++++++.... +..++.++|||+||.+++.++.++|++++++|+++|......
T Consensus 78 -~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 154 (303)
T 3pe6_A 78 -VGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE 154 (303)
T ss_dssp -TTSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHH
T ss_pred -CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchh
Confidence 6777764321 235677899999999998763 356899999999999999999999999999999998754210
Q ss_pred ----------------CC-cCccccc-chh---hhhHHHHHh---------------------cCcccccCCCCCcEEEE
Q 002209 799 ----------------TP-FGFQNED-RTL---WEATSTYVE---------------------MSPFMSANKLKKPILLV 836 (953)
Q Consensus 799 ----------------~~-~~~~~~~-~~~---~~~~~~~~~---------------------~sp~~~~~~i~~P~Li~ 836 (953)
.. ....... ... ......+.. ......+.++++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 234 (303)
T 3pe6_A 155 SATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLL 234 (303)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEE
T ss_pred ccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEE
Confidence 00 0000000 000 000000000 01123467789999999
Q ss_pred EeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc--ccHHHHHHHHHHHHHHhccC
Q 002209 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR--ESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~l~~ 900 (953)
+|++|..++ .+.+.++++.+.. ..+++++++++||.+... +....+.+.+++||++++..
T Consensus 235 ~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 235 QGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp EETTCSSBC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeCCCCCCC--hHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 999999998 8888888887753 257999999999987432 22456778899999988743
No 90
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.77 E-value=1.4e-17 Score=172.00 Aligned_cols=198 Identities=13% Similarity=0.093 Sum_probs=143.1
Q ss_pred EEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCC--------------
Q 002209 656 LYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT-------------- 721 (953)
Q Consensus 656 l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~-------------- 721 (953)
++.|+. +.+.|+||++||..... ..| ......|+++||.|+.++..
T Consensus 14 ~~~p~~-----~~~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 73 (232)
T 1fj2_A 14 AIVPAA-----RKATAAVIFLHGLGDTG-----------HGW----AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73 (232)
T ss_dssp EEECCS-----SCCSEEEEEECCSSSCH-----------HHH----HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEEC
T ss_pred cccCCC-----CCCCceEEEEecCCCcc-----------chH----HHHHHHHhcCCcEEEecCCCcccccccccccccc
Confidence 456654 23589999999963110 001 12233445579999996432
Q ss_pred --CCCCCCChh-hhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC
Q 002209 722 --PIIGEGDEE-ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (953)
Q Consensus 722 --~~~G~G~~~-~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~ 798 (953)
+..|+.... .........++|+.++++++.+ ..+|+++++|+|||+||.+++.++.++|++++++|+++|..+...
T Consensus 74 w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp SSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 334441111 1223356778888888888877 557788999999999999999999999999999999998754211
Q ss_pred CCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCc--EEEEEeCCCCcc
Q 002209 799 TPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL--CRLVILPFESHG 876 (953)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~H~ 876 (953)
. + ......+.++++|+|++||++|..++ ++.+.++++.+++.+.+ ++++++++++|.
T Consensus 153 ~---~----------------~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~ 211 (232)
T 1fj2_A 153 S---F----------------PQGPIGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHS 211 (232)
T ss_dssp G---S----------------CSSCCCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSS
T ss_pred c---c----------------cccccccccCCCCEEEEecCCCccCC--HHHHHHHHHHHHHhCCCCceEEEEeCCCCcc
Confidence 0 0 00112356678999999999999998 99999999999988755 999999999998
Q ss_pred CCCcccHHHHHHHHHHHHHHhccC
Q 002209 877 YAARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
+. .+..+.+.+||++++..
T Consensus 212 ~~-----~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 212 SC-----QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp CC-----HHHHHHHHHHHHHHSCC
T ss_pred cC-----HHHHHHHHHHHHHhcCC
Confidence 73 33458899999999854
No 91
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.76 E-value=8.4e-18 Score=189.56 Aligned_cols=233 Identities=17% Similarity=0.172 Sum_probs=160.5
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
...+.++++. +|..+.++++.|. ..+.|+||++||+... ...+.......++++||.|+
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~~------~~~~p~vv~~HG~~~~--------------~~~~~~~~~~~~~~~g~~vi 191 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIISE------DKAQDTLIVVGGGDTS--------------REDLFYMLGYSGWEHDYNVL 191 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCS------SSCCCEEEEECCSSCC--------------HHHHHHHTHHHHHHTTCEEE
T ss_pred CCcEEEEEeE-CCeEEEEEEEcCC------CCCCCEEEEECCCCCC--------------HHHHHHHHHHHHHhCCcEEE
Confidence 3467777876 6789999988432 2236999999995211 00001111224568999999
Q ss_pred EcCCCCCCCCCChhhhh-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC
Q 002209 717 GGPTTPIIGEGDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d 795 (953)
.+|+ +|+|.+.... .+......|+.+++++|..+. ++++|+|||+||++++.++.++| +++++|+.+|+.+
T Consensus 192 ~~D~---~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~ 263 (405)
T 3fnb_A 192 MVDL---PGQGKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYD 263 (405)
T ss_dssp EECC---TTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSC
T ss_pred EEcC---CCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCC
Confidence 9554 6777774321 122345788889999986653 68999999999999999999998 8999999999876
Q ss_pred CCCC-----------CcCccc---------ccchhh---------------hhHHHHHhcCcccccCCCCCcEEEEEeCC
Q 002209 796 RTLT-----------PFGFQN---------EDRTLW---------------EATSTYVEMSPFMSANKLKKPILLVHGEE 840 (953)
Q Consensus 796 ~~~~-----------~~~~~~---------~~~~~~---------------~~~~~~~~~sp~~~~~~i~~P~Li~~G~~ 840 (953)
.... +..... .....| .....+....+...+.++++|+||+||++
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 343 (405)
T 3fnb_A 264 VAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAG 343 (405)
T ss_dssp HHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETT
T ss_pred HHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCC
Confidence 2100 000000 000000 00122333344444788999999999999
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccC--CCcccHHHHHHHHHHHHHHhccC
Q 002209 841 DNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY--AARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 841 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
|..|| +.++.++++.++..+.++++++++++.|.. ...+....+.+.+.+||+++++.
T Consensus 344 D~~v~--~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 344 EDSEL--MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp SCHHH--HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred CcCCC--hHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 99988 999999999999988899999997665542 24566788899999999999864
No 92
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.76 E-value=2.2e-17 Score=174.48 Aligned_cols=226 Identities=13% Similarity=0.081 Sum_probs=152.6
Q ss_pred eEEEEE-EcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 639 KELIKY-QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 639 ~~~~~~-~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
.+.+++ .+.+|.++.+..+.+.+ .+.|+||++||+.... ..+ ........++++||.|+.
T Consensus 11 ~~~~~~~~~~~g~~l~~~~~~~~~------~~~~~vv~~HG~~~~~-----------~~~--~~~~~~~~l~~~g~~v~~ 71 (270)
T 3llc_A 11 THAITVGQGSDARSIAALVRAPAQ------DERPTCIWLGGYRSDM-----------TGT--KALEMDDLAASLGVGAIR 71 (270)
T ss_dssp EEEEEESSGGGCEEEEEEEECCSS------TTSCEEEEECCTTCCT-----------TSH--HHHHHHHHHHHHTCEEEE
T ss_pred cceEEEeeccCcceEEEEeccCCC------CCCCeEEEECCCcccc-----------ccc--hHHHHHHHHHhCCCcEEE
Confidence 344555 55689999888776542 1268999999963110 011 011234556789999999
Q ss_pred cCCCCCCCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CC---CcccEEEE
Q 002209 718 GPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH---AP---HLFCCGIA 789 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~---~p---~~~~a~v~ 789 (953)
+|+ +|+|.+... .......++|+.++++++. .++++|+|||+||.+++.++.+ +| ++++++|+
T Consensus 72 ~d~---~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il 142 (270)
T 3llc_A 72 FDY---SGHGASGGAFRDGTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVL 142 (270)
T ss_dssp ECC---TTSTTCCSCGGGCCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEE
T ss_pred ecc---ccCCCCCCccccccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEE
Confidence 555 566666432 2345677888888888763 4689999999999999999999 99 89999999
Q ss_pred cccCCCCCCCC-c-C--------------------cccc-cchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCC
Q 002209 790 RSGAYNRTLTP-F-G--------------------FQNE-DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGT 846 (953)
Q Consensus 790 ~~~~~d~~~~~-~-~--------------------~~~~-~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~ 846 (953)
++|..+..... + . +... ..........+........+.++++|+|++||++|..||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~- 221 (270)
T 3llc_A 143 IAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVP- 221 (270)
T ss_dssp ESCCTTHHHHTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSC-
T ss_pred ecCcccchhhhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCC-
Confidence 99875421100 0 0 0000 000011122333344456678889999999999999998
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 847 LTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 847 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
.+.+.++++.+.. .+++++++++++|.+...+....+.+.+.+||++
T Consensus 222 -~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 222 -YQHALKLVEHLPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp -HHHHHHHHHTSCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHhcCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 8888888877654 3589999999999876555566666677777654
No 93
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.76 E-value=4.9e-17 Score=165.11 Aligned_cols=180 Identities=14% Similarity=0.075 Sum_probs=132.8
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCC----------CCCCCChhh---hhhh
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP----------IIGEGDEEA---NDRF 735 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~----------~~G~G~~~~---~~~~ 735 (953)
+.| ||++||.... ...| ......|+ .||.|+.++... ..|+|.... ....
T Consensus 16 ~~p-vv~lHG~g~~-----------~~~~----~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~ 78 (209)
T 3og9_A 16 LAP-LLLLHSTGGD-----------EHQL----VEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLES 78 (209)
T ss_dssp SCC-EEEECCTTCC-----------TTTT----HHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHH
T ss_pred CCC-EEEEeCCCCC-----------HHHH----HHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHH
Confidence 478 9999995311 1111 12334444 899999977421 233333211 1223
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHH
Q 002209 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATS 815 (953)
Q Consensus 736 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 815 (953)
....+.++.+.++.+.+...+|+++++|+||||||.+++.++.++|++++++|+++|......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------------- 141 (209)
T 3og9_A 79 LDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF----------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-----------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-----------------
Confidence 456677777888888777668889999999999999999999999999999999998654211
Q ss_pred HHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 816 TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 816 ~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
.......++|+|++||++|.+|| +++++++++.++..+.++++++++ ++|.+. ....+.+.+||+
T Consensus 142 -------~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~ 206 (209)
T 3og9_A 142 -------EQTVQLDDKHVFLSYAPNDMIVP--QKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLT 206 (209)
T ss_dssp -------CCCCCCTTCEEEEEECTTCSSSC--HHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHH
T ss_pred -------cccccccCCCEEEEcCCCCCccC--HHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHH
Confidence 11123467899999999999999 999999999999999999999998 699884 344678889998
Q ss_pred Hh
Q 002209 896 KY 897 (953)
Q Consensus 896 ~~ 897 (953)
+.
T Consensus 207 ~~ 208 (209)
T 3og9_A 207 ET 208 (209)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 94
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.76 E-value=1e-17 Score=169.44 Aligned_cols=184 Identities=13% Similarity=0.071 Sum_probs=124.1
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhh-----hhhhHHHHHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA-----NDRFVEQLVACA 743 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~-----~~~~~~~~~~D~ 743 (953)
..++||++||.... ...+. ..+..|...||.|++++..+..+++.... ...........+
T Consensus 21 a~~~Vv~lHG~G~~-----------~~~~~----~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i 85 (210)
T 4h0c_A 21 AKKAVVMLHGRGGT-----------AADII----SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALV 85 (210)
T ss_dssp CSEEEEEECCTTCC-----------HHHHH----GGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHH
T ss_pred CCcEEEEEeCCCCC-----------HHHHH----HHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHH
Confidence 36899999993110 00010 11233455799999988755443332211 112223333444
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcc
Q 002209 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPF 823 (953)
Q Consensus 744 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 823 (953)
...++.+.+. .+|++||+|+|+|+||++++.++.++|++|+++|+++|........ .. ..
T Consensus 86 ~~~~~~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~---~~-------------~~--- 145 (210)
T 4h0c_A 86 GEVVAEIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA---IG-------------NY--- 145 (210)
T ss_dssp HHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC---GG-------------GC---
T ss_pred HHHHHHHHHh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh---hh-------------hh---
Confidence 4444444444 5899999999999999999999999999999999998753211000 00 00
Q ss_pred cccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 824 ~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
.....++|+|++||++|.+|| ++.++++++.|++.|.++++++||+++|.+.. +.++.+.+||.
T Consensus 146 -~~~~~~~Pvl~~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 146 -KGDFKQTPVFISTGNPDPHVP--VSRVQESVTILEDMNAAVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp -CBCCTTCEEEEEEEESCTTSC--HHHHHHHHHHHHHTTCEEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred -hhhccCCceEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 011235799999999999999 99999999999999999999999999999852 23455666654
No 95
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.76 E-value=1.2e-16 Score=195.18 Aligned_cols=330 Identities=11% Similarity=0.034 Sum_probs=197.4
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccC-CCCCCce
Q 002209 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFP-DGKLGQE 179 (953)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~-~g~~~~~ 179 (953)
++..++.....+. .+|||++++|...+ .+... ..||+.+... ++ +..
T Consensus 101 ~~~~~~~~~~~~~--p~pdG~~~~~~~~~----------------------~~~~~------~~l~~~~~~~~~~--~~~ 148 (741)
T 1yr2_A 101 RMKALIDYERFGL--PQRRGASVFYSWNS----------------------GLMNQ------SQLLVRPADAPVG--TKG 148 (741)
T ss_dssp HHHHHSCCCEECC--CEEETTEEEEEEEC----------------------SSCSS------CEEEEEETTSCTT--CCC
T ss_pred HHHHhhcccccCC--CEEECCEEEEEEEc----------------------CCCeE------EEEEEEcCCccCC--CCC
Confidence 3444444433334 46999999999875 11112 2678877531 02 333
Q ss_pred eeeec---CCCCC--cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC
Q 002209 180 IEIQG---FPDGA--KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN 254 (953)
Q Consensus 180 ~~l~~---~~~~~--~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD 254 (953)
+.|.. ++.+. .+..++|||||++|||..+.. +++...||++|+++|+..+.+.... . +..++||||
T Consensus 149 ~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~----G~e~~~i~v~dl~tg~~~~~~~~~~-~----~~~~~wspD 219 (741)
T 1yr2_A 149 RVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG----GSDWRTVKFVGVADGKPLADELKWV-K----FSGLAWLGN 219 (741)
T ss_dssp EEEECGGGCC----EEEEEEEECTTSSEEEEEEEET----TCSEEEEEEEETTTCCEEEEEEEEE-E----SCCCEESTT
T ss_pred EEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC----CCceEEEEEEECCCCCCCCccCCCc-e----eccEEEECC
Confidence 44321 22222 577899999999999988643 4445789999999998765422111 1 357999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--eeEeCCC
Q 002209 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP 331 (953)
Q Consensus 255 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--~~~l~~~ 331 (953)
+.|+|+....... +... ... ....+||++++ ++. .+.+...
T Consensus 220 -~~l~~~~~~~~~~---------~~~~------------------~~~--------~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 220 -DALLYSRFAEPKE---------GQAF------------------QAL--------NYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp -SEEEEEECCCC-----------------------------------C--------CCCCEEEEEETTSCGGGCEEEECC
T ss_pred -CEEEEEEecCccc---------cccc------------------ccC--------CCCCEEEEEECCCCchhCEEEecc
Confidence 9999984322100 0000 000 02357889998 664 2344332
Q ss_pred ----CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCc--e-EEEeccCCCcccCCccccccccCccce
Q 002209 332 ----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--F-VRELCDLPLAEDIPIAFNSVRKGMRSI 404 (953)
Q Consensus 332 ----~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~--~-~~~l~~~~~~~~~p~~~~~~~~~~~~~ 404 (953)
..+.++.|||||++|++.+.+.. ....+|+++|++++ + .+.|..... ....+
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~l~~~~~-------------~~~~~ 322 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGT--------DPVNTVHVARVTNGKIGPVTALIPDLK-------------AQWDF 322 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTT--------CSCCEEEEEEEETTEECCCEEEECSSS-------------SCEEE
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccC--------CCcceEEEEECCCCCCcccEEecCCCC-------------ceEEE
Confidence 24678999999999999985431 12348999999876 4 566654321 11223
Q ss_pred eeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCC--CCceEEeec-ccccCCeeeccCCceEEEEEecccCce
Q 002209 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG--EGPEILHKL-DLRYGGISWCDDSLALVYESWYKTRRT 481 (953)
Q Consensus 405 ~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g--~~~~~l~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~ 481 (953)
|+|||+.|+|..+.. .....|+++++ ++ ++.+.+... ...+..+.|+ +..|++....+. ..
T Consensus 323 -~~~dg~~l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg-~~ 386 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDG---------APLKKIVRVDL---SGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDA-KS 386 (741)
T ss_dssp -EEEETTEEEEEECTT---------CTTCEEEEEEC---SSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETT-EE
T ss_pred -EeccCCEEEEEECCC---------CCCCEEEEEeC---CCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECC-EE
Confidence 569999988884321 23567999996 43 234455433 2233445665 556766655443 36
Q ss_pred EEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCC
Q 002209 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (953)
Q Consensus 482 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~ 561 (953)
+||+++++++ ....+.-.....+.. ++++|||+.|+|...... ....||+||+++
T Consensus 387 ~l~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~~-----------------~P~~i~~~d~~t 441 (741)
T 1yr2_A 387 QVLAFDLDGK--PAGAVSLPGIGSASG------LSGRPGDRHAYLSFSSFT-----------------QPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTSC--EEEECBCSSSCEEEE------EECCBTCSCEEEEEEETT-----------------EEEEEEEEETTT
T ss_pred EEEEEeCCCC--ceeeccCCCCeEEEE------eecCCCCCEEEEEEcCCC-----------------CCCEEEEEECCC
Confidence 8999998653 233333111222222 678999998888864321 134599999999
Q ss_pred CceEEEec
Q 002209 562 GSKERIWE 569 (953)
Q Consensus 562 ~~~~~l~~ 569 (953)
++.+.+..
T Consensus 442 g~~~~l~~ 449 (741)
T 1yr2_A 442 AKTTPWEP 449 (741)
T ss_dssp TEEEECSC
T ss_pred CcEEEEec
Confidence 98766654
No 96
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.76 E-value=1.9e-16 Score=189.01 Aligned_cols=114 Identities=6% Similarity=0.083 Sum_probs=66.9
Q ss_pred cCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe-ecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCc
Q 002209 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL-FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGT 536 (953)
Q Consensus 458 ~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~ 536 (953)
+..++|||||+.|+..+.++. .+||.++ ++ ....+ .......+.. ++|||||++|+....+.
T Consensus 451 v~~va~spdg~~lasgs~D~~--v~lwd~~--~~--~~~~~~~~~h~~~v~~------v~fspdg~~las~s~d~----- 513 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQDSK--VHVYKLS--GA--SVSEVKTIVHPAEITS------VAFSNNGAFLVATDQSR----- 513 (611)
T ss_dssp EEEEEECTTSCEEEEEETTSE--EEEEEEE--TT--EEEEEEEEECSSCEEE------EEECTTSSEEEEEETTS-----
T ss_pred ceEEEEeCCCCEEEEeCCCCe--EEEEEcc--CC--ceeeeeccCCCCceEE------EEECCCCCEEEEEcCCC-----
Confidence 346889999999988875542 3555554 32 11111 1222222333 88999999998776322
Q ss_pred EEEEecCCCCCCCCCCeEEEEECCC-CceEEE--ec-cCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEE
Q 002209 537 YILLNGNGATPEGNIPFLDLFDINT-GSKERI--WE-SDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYY 612 (953)
Q Consensus 537 ~~~~~~~~~~~~~~~~~L~~~d~~~-~~~~~l--~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~ 612 (953)
.+++||+.+ ++.... +. .... +. ..+|||||+.|+..... ..+.
T Consensus 514 ----------------~v~~w~~~~~~~~~~~~~~~~H~~~-----V~-------~v~fspdg~~lasgs~D----~~v~ 561 (611)
T 1nr0_A 514 ----------------KVIPYSVANNFELAHTNSWTFHTAK-----VA-------CVSWSPDNVRLATGSLD----NSVI 561 (611)
T ss_dssp ----------------CEEEEEGGGTTEESCCCCCCCCSSC-----EE-------EEEECTTSSEEEEEETT----SCEE
T ss_pred ----------------CEEEEEcCCCCceeeeeeeeecccc-----ee-------EEEECCCCCEEEEEECC----CcEE
Confidence 388999876 433221 11 1111 11 24799999977754332 3488
Q ss_pred EEECCCCC
Q 002209 613 IQSWPDKK 620 (953)
Q Consensus 613 ~~~~~~g~ 620 (953)
+|++.+++
T Consensus 562 lW~~~~~~ 569 (611)
T 1nr0_A 562 VWNMNKPS 569 (611)
T ss_dssp EEETTCTT
T ss_pred EEECCCcc
Confidence 89987765
No 97
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.76 E-value=1.6e-17 Score=175.71 Aligned_cols=198 Identities=16% Similarity=0.073 Sum_probs=139.2
Q ss_pred EEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH--cCcEEEEcCC---CCCCCCC
Q 002209 653 SATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPT---TPIIGEG 727 (953)
Q Consensus 653 ~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~V~~~~~---~~~~G~G 727 (953)
..+...|+. ++ ++.|+||++||.... .+.+. .....|+. .++.++.++. ....|.|
T Consensus 53 l~y~~~p~~--~~--~~~plVI~LHG~G~~-----------~~~~~----~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G 113 (285)
T 4fhz_A 53 LTFGRRGAA--PG--EATSLVVFLHGYGAD-----------GADLL----GLAEPLAPHLPGTAFVAPDAPEPCRANGFG 113 (285)
T ss_dssp CCEEEEESC--TT--CCSEEEEEECCTTBC-----------HHHHH----TTHHHHGGGSTTEEEEEECCSEECTTSSSC
T ss_pred ceeecCCCC--CC--CCCcEEEEEcCCCCC-----------HHHHH----HHHHHHHHhCCCeEEEecCCCcccccCCCc
Confidence 334555543 22 358999999994110 00111 12344554 3788887653 1223444
Q ss_pred Chhhh------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC
Q 002209 728 DEEAN------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (953)
Q Consensus 728 ~~~~~------------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d 795 (953)
..+.. .........++.+.++.+.++..+|++||+|+|+|+||++++.++.++|+.|+++|+++|...
T Consensus 114 ~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~ 193 (285)
T 4fhz_A 114 FQWFPIPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLL 193 (285)
T ss_dssp EESSCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCS
T ss_pred ccccccccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCcc
Confidence 43211 111233456677777777777779999999999999999999999999999999999887421
Q ss_pred CCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCc
Q 002209 796 RTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESH 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 875 (953)
. .+.+.. ..+.++|+|++||++|.+|| ++.+++++++|++.|.++++++|+++||
T Consensus 194 ~-----------------~~~~~~------~~~~~~Pvl~~hG~~D~~Vp--~~~~~~~~~~L~~~g~~~~~~~y~g~gH 248 (285)
T 4fhz_A 194 A-----------------PERLAE------EARSKPPVLLVHGDADPVVP--FADMSLAGEALAEAGFTTYGHVMKGTGH 248 (285)
T ss_dssp C-----------------HHHHHH------HCCCCCCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEETTCCS
T ss_pred C-----------------chhhhh------hhhhcCcccceeeCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEECCCCC
Confidence 0 011111 12346899999999999999 9999999999999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHhcc
Q 002209 876 GYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 876 ~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
.+. .+.++.+.+||+++|-
T Consensus 249 ~i~-----~~~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 249 GIA-----PDGLSVALAFLKERLP 267 (285)
T ss_dssp SCC-----HHHHHHHHHHHHHHCC
T ss_pred CCC-----HHHHHHHHHHHHHHCc
Confidence 974 3446789999999984
No 98
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.76 E-value=3.3e-17 Score=182.82 Aligned_cols=241 Identities=13% Similarity=0.089 Sum_probs=159.6
Q ss_pred CCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCc--cchHHHHHHHcCc
Q 002209 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRI--GSTSVLLWLARGF 713 (953)
Q Consensus 636 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~la~~G~ 713 (953)
.++.+..++...||..+.++.+.|........++.|+||++||.+.... .|... ....+..|+++||
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~-----------~~~~~~~~~~~a~~l~~~G~ 92 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-----------NWISNLPNNSLAFILADAGY 92 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-----------GGSSSCTTTCHHHHHHHTTC
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh-----------hhhcCCCcccHHHHHHHCCC
Confidence 3567888899999999999888765311001124789999999643221 11111 1234557889999
Q ss_pred EEEEcCCCCCCCCCChhhh-----------hhhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC
Q 002209 714 AILGGPTTPIIGEGDEEAN-----------DRFVEQLVA-CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP 781 (953)
Q Consensus 714 ~V~~~~~~~~~G~G~~~~~-----------~~~~~~~~~-D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p 781 (953)
.|+++ +.+|+|.+... ......... |+.++++++.+.. +.+++.|+||||||.+++.++.++|
T Consensus 93 ~vi~~---D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p 167 (377)
T 1k8q_A 93 DVWLG---NSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNP 167 (377)
T ss_dssp EEEEC---CCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCH
T ss_pred CEEEe---cCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCc
Confidence 99994 45677766431 123456666 9999999887652 3468999999999999999999999
Q ss_pred C---cccEEEEcccCCCCCCCCcCccc-------------------ccchhh----------------------------
Q 002209 782 H---LFCCGIARSGAYNRTLTPFGFQN-------------------EDRTLW---------------------------- 811 (953)
Q Consensus 782 ~---~~~a~v~~~~~~d~~~~~~~~~~-------------------~~~~~~---------------------------- 811 (953)
+ +++++|+++|..........+.. .....+
T Consensus 168 ~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T 1k8q_A 168 KLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFD 247 (377)
T ss_dssp HHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCC
T ss_pred hhhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCC
Confidence 8 89999999987543211000000 000000
Q ss_pred ------hhHHHH----------------------------------------HhcC-cccccCCCCCcEEEEEeCCCCCC
Q 002209 812 ------EATSTY----------------------------------------VEMS-PFMSANKLKKPILLVHGEEDNNS 844 (953)
Q Consensus 812 ------~~~~~~----------------------------------------~~~s-p~~~~~~i~~P~Li~~G~~D~~v 844 (953)
+....+ .... +...+.++++|+|++||++|..|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 327 (377)
T 1k8q_A 248 TMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLA 327 (377)
T ss_dssp GGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSS
T ss_pred cccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCccc
Confidence 000000 0000 12237788999999999999999
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC--cccHHHHHHHHHHHHHHh
Q 002209 845 GTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA--RESIMHVLWETDRWLQKY 897 (953)
Q Consensus 845 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~--~~~~~~~~~~i~~fl~~~ 897 (953)
| ++.+.++++.+... .++++++++||.... .+....+.+.+.+||++|
T Consensus 328 ~--~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 328 D--PHDVDLLLSKLPNL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp C--HHHHHHHHTTCTTE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred C--HHHHHHHHHhCcCc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 8 88888887766432 248899999998642 356678889999999753
No 99
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.76 E-value=4.7e-16 Score=185.51 Aligned_cols=329 Identities=11% Similarity=0.065 Sum_probs=199.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
....++|||||++||+.... .+.||++.+ + ...+.+.++. .
T Consensus 20 ~~~~~~~spdg~~l~~~~~~----------------------------------~v~l~~~~~-~--~~~~~~~~h~--~ 60 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNGT----------------------------------SVYTVPVGS-L--TDTEIYTEHS--H 60 (611)
T ss_dssp CCCCCEECTTSSEEEEEETT----------------------------------EEEEEETTC-S--SCCEEECCCS--S
T ss_pred ceeEEeeCCCCCEEEeCCCC----------------------------------EEEEecCCC-c--ccCeEecCCC--C
Confidence 35578899999999998753 678999843 2 2334444433 4
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCcee---ecccCCCccccccccceEEecCCeEEEEEecCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 266 (953)
.+...+|||||++||... ....|.++|+.+++.. .+..+.. .+..++|+|||+.|+.+..+.
T Consensus 61 ~v~~~~~spdg~~lasg~---------~d~~v~lWd~~~~~~~~~~~~~~~~~-----~v~~v~fs~dg~~l~~~~~~~- 125 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGD---------VHGNVRIWDTTQTTHILKTTIPVFSG-----PVKDISWDSESKRIAAVGEGR- 125 (611)
T ss_dssp CEEEEEECTTSSEEEEEE---------TTSEEEEEESSSTTCCEEEEEECSSS-----CEEEEEECTTSCEEEEEECCS-
T ss_pred ceEEEEECCCCcEEEEEe---------CCCCEEEeECCCCcceeeEeecccCC-----ceEEEEECCCCCEEEEEECCC-
Confidence 689999999999999855 2557888888654432 2222222 277999999999998762110
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCC-CcccccccCCCCcE
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKY 345 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDG~~ 345 (953)
+ ....+++++.......+... ..+..++|+|||+.
T Consensus 126 -------------------------------------~-------~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~ 161 (611)
T 1nr0_A 126 -------------------------------------E-------RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPF 161 (611)
T ss_dssp -------------------------------------S-------CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSC
T ss_pred -------------------------------------C-------ceeEEEEeeCCCCcceecCCCCCceEEEECCCCCe
Confidence 0 11345555542223334444 77889999999985
Q ss_pred -EEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 346 -ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 346 -l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
|+..+.+ +.|.+||....... .+..+ ...+..++|+|||+.++-.
T Consensus 162 ~l~s~s~D-------------~~v~lwd~~~~~~~~~l~~H-------------~~~V~~v~fspdg~~las~------- 208 (611)
T 1nr0_A 162 RIISGSDD-------------NTVAIFEGPPFKFKSTFGEH-------------TKFVHSVRYNPDGSLFAST------- 208 (611)
T ss_dssp EEEEEETT-------------SCEEEEETTTBEEEEEECCC-------------SSCEEEEEECTTSSEEEEE-------
T ss_pred EEEEEeCC-------------CeEEEEECCCCeEeeeeccc-------------cCceEEEEECCCCCEEEEE-------
Confidence 6655533 38999998755432 33222 2345789999999976655
Q ss_pred CcccccccCCeEEEEecCCCCCCCceEEe-------ecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcE
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILH-------KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g~~~~~l~-------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (953)
+..+.+.+|++ .++.....+. .+...+..++|+|||+.|+..+.++ .+.++|+.++ +..
T Consensus 209 ------s~D~~i~lwd~--~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~----~v~lWd~~~~--~~~ 274 (611)
T 1nr0_A 209 ------GGDGTIVLYNG--VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK----TIKIWNVATL--KVE 274 (611)
T ss_dssp ------ETTSCEEEEET--TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTT--EEE
T ss_pred ------ECCCcEEEEEC--CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC----eEEEEeCCCC--cee
Confidence 44567899995 2332223332 3556677899999999998876554 3455566553 212
Q ss_pred EeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccce
Q 002209 497 ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYY 576 (953)
Q Consensus 497 ~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~ 576 (953)
......... . ........+++.++....+ ..+.+||..+++..+...+...
T Consensus 275 ~~~~~~~~~-~----~~~~~~~~~~~~l~s~s~d---------------------~~i~~~~~~~~~~~~~~~gh~~--- 325 (611)
T 1nr0_A 275 KTIPVGTRI-E----DQQLGIIWTKQALVSISAN---------------------GFINFVNPELGSIDQVRYGHNK--- 325 (611)
T ss_dssp EEEECCSSG-G----GCEEEEEECSSCEEEEETT---------------------CCEEEEETTTTEEEEEECCCSS---
T ss_pred eeecCCCCc-c----ceeEEEEEcCCEEEEEeCC---------------------CcEEEEeCCCCCcceEEcCCCC---
Confidence 111111000 0 0002223356666555421 1388899887765444332211
Q ss_pred eeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEE
Q 002209 577 ETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (953)
Q Consensus 577 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~L 624 (953)
.+.. .+|+|||+.++..... ..+.++++.+++...+
T Consensus 326 -~v~~-------l~~spdg~~l~s~s~D----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 326 -AITA-------LSSSADGKTLFSADAE----GHINSWDISTGISNRV 361 (611)
T ss_dssp -CEEE-------EEECTTSSEEEEEETT----SCEEEEETTTCCEEEC
T ss_pred -CEEE-------EEEeCCCCEEEEEeCC----CcEEEEECCCCceeee
Confidence 1222 4689999977644433 3588999988865543
No 100
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.76 E-value=2.5e-16 Score=171.56 Aligned_cols=268 Identities=13% Similarity=0.140 Sum_probs=175.7
Q ss_pred CCCCceecCC----CCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecC
Q 002209 110 PLPALSFSPQ----RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (953)
Q Consensus 110 ~~~~~~~SPD----G~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~ 185 (953)
.+..++|||+ |+.|+..+.+ +.|.||++.. +.......+.+.
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D---------------------------------~~v~vW~~~~-~~~~~~~~l~gh 79 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLD---------------------------------DLVKVWKWRD-ERLDLQWSLEGH 79 (321)
T ss_dssp CEEEEEEC-------CEEEEEETT---------------------------------SCEEEEEEET-TEEEEEEEECCC
T ss_pred cEEEEEEecCCCCCCCEEEEEcCC---------------------------------CCEEEEECCC-CCeeeeeeeccC
Confidence 5778899885 5678877765 3678998843 110111123332
Q ss_pred CCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCC
Q 002209 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (953)
Q Consensus 186 ~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 265 (953)
. ..+....|+|+++.++..+ ....|.++|+.+++........... +..++|+|||+.|+...
T Consensus 80 ~--~~v~~~~~~~~~~~l~s~s---------~D~~i~lWd~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~g~--- 141 (321)
T 3ow8_A 80 Q--LGVVSVDISHTLPIAASSS---------LDAHIRLWDLENGKQIKSIDAGPVD----AWTLAFSPDSQYLATGT--- 141 (321)
T ss_dssp S--SCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCTTC----CCCEEECTTSSEEEEEC---
T ss_pred C--CCEEEEEECCCCCEEEEEe---------CCCcEEEEECCCCCEEEEEeCCCcc----EEEEEECCCCCEEEEEc---
Confidence 2 3688899999999888754 2568889999888764433322221 55799999999998761
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCC
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPD 342 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpD 342 (953)
..+.+.++++ +++. ..+... ..+..++||||
T Consensus 142 ----------------------------------------------~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 142 ----------------------------------------------HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPD 175 (321)
T ss_dssp ----------------------------------------------TTSEEEEEETTTCSEEEEEECSSSCEEEEEECTT
T ss_pred ----------------------------------------------CCCcEEEEEcCCCceeEEecCCCceEEEEEECCC
Confidence 2245667787 5543 333333 66788999999
Q ss_pred CcEEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002209 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 343 G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~ 421 (953)
|++|+..+.+. .|.+||+.+++. ..+..+. ..+..++|+|||+.|+..
T Consensus 176 g~~lasg~~dg-------------~i~iwd~~~~~~~~~~~~h~-------------~~v~~l~~spd~~~l~s~----- 224 (321)
T 3ow8_A 176 GKYLASGAIDG-------------IINIFDIATGKLLHTLEGHA-------------MPIRSLTFSPDSQLLVTA----- 224 (321)
T ss_dssp SSEEEEEETTS-------------CEEEEETTTTEEEEEECCCS-------------SCCCEEEECTTSCEEEEE-----
T ss_pred CCEEEEEcCCC-------------eEEEEECCCCcEEEEEcccC-------------CceeEEEEcCCCCEEEEE-----
Confidence 99999887443 899999986553 3333221 335689999999976655
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecC
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 501 (953)
+..+.|.+||+ ..+.....+..+...+..++|+|||+.|+..+.++ .+.++|+.++ +.......
T Consensus 225 --------s~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~----~v~iwd~~~~--~~~~~~~~ 288 (321)
T 3ow8_A 225 --------SDDGYIKIYDV--QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK----SVKVWDVGTR--TCVHTFFD 288 (321)
T ss_dssp --------CTTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTT--EEEEEECC
T ss_pred --------cCCCeEEEEEC--CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCC----cEEEEeCCCC--EEEEEEcC
Confidence 44567899996 23333344555666778899999999988876554 3445566553 23333333
Q ss_pred CCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 502 SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 502 ~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
....+.. +.|+|||++|+...
T Consensus 289 h~~~v~~------v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 289 HQDQVWG------VKYNGNGSKIVSVG 309 (321)
T ss_dssp CSSCEEE------EEECTTSSEEEEEE
T ss_pred CCCcEEE------EEECCCCCEEEEEe
Confidence 3333443 78999999988766
No 101
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.75 E-value=9.4e-18 Score=177.10 Aligned_cols=201 Identities=15% Similarity=0.122 Sum_probs=146.9
Q ss_pred EEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcC
Q 002209 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (953)
Q Consensus 640 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (953)
+...+.-.+|..+...+|.|.+ ++.|+||++|||.+..+. ...| ......|+++||.|+.++
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~------~~~p~vv~~HGgg~~~~~--------~~~~----~~~~~~l~~~G~~v~~~d 100 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFD--------KSSW----SHLAVGALSKGWAVAMPS 100 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCC--------GGGC----GGGGHHHHHTTEEEEEEC
T ss_pred CccccccCCCCCceEEEEccCC------CCCCEEEEEcCcccccCC--------hHHH----HHHHHHHHhCCCEEEEeC
Confidence 3344544566667788888864 247999999997432111 1112 123557788999999977
Q ss_pred CCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC------CCcccEEEEcccC
Q 002209 720 TTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA------PHLFCCGIARSGA 793 (953)
Q Consensus 720 ~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~------p~~~~a~v~~~~~ 793 (953)
++ |.+. ......+.|+.++++++..+.. ++++|+||||||.+++.++.++ |++++++|+++|+
T Consensus 101 ~~---~~~~-----~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~ 169 (262)
T 2pbl_A 101 YE---LCPE-----VRISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPL 169 (262)
T ss_dssp CC---CTTT-----SCHHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCC
T ss_pred CC---CCCC-----CChHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCc
Confidence 64 4332 2356778999999999988653 6999999999999999999887 7899999999998
Q ss_pred CCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002209 794 YNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (953)
Q Consensus 794 ~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 873 (953)
++.......+ ...........+...+|...+.++++|+|++||++|..++ ++++.++++.++ +++++++++
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~-----~~~~~~~~~ 240 (262)
T 2pbl_A 170 SDLRPLLRTS--MNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEK 240 (262)
T ss_dssp CCCGGGGGST--THHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTC
T ss_pred cCchHHHhhh--hhhhhCCCHHHHHhcCcccccCCCCCCEEEEEeCCCCccc--HHHHHHHHHHhC-----CeEEEeCCC
Confidence 7642211111 0111112344556778888888999999999999999988 999999999886 689999999
Q ss_pred CccCC
Q 002209 874 SHGYA 878 (953)
Q Consensus 874 ~H~~~ 878 (953)
+|...
T Consensus 241 ~H~~~ 245 (262)
T 2pbl_A 241 HHFNV 245 (262)
T ss_dssp CTTTT
T ss_pred CcchH
Confidence 99764
No 102
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.75 E-value=2.9e-15 Score=167.97 Aligned_cols=355 Identities=14% Similarity=0.086 Sum_probs=213.8
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~ 243 (953)
.|++||+.+ ++.... +..+..+..+.|||||++|+++.. ....|+++|+.+++.......+..
T Consensus 13 ~v~v~d~~~----~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~--- 75 (391)
T 1l0q_A 13 NISVIDVTS----NKVTAT--IPVGSNPMGAVISPDGTKVYVANA--------HSNDVSIIDTATNNVIATVPAGSS--- 75 (391)
T ss_dssp EEEEEETTT----TEEEEE--EECSSSEEEEEECTTSSEEEEEEG--------GGTEEEEEETTTTEEEEEEECSSS---
T ss_pred EEEEEECCC----CeEEEE--eecCCCcceEEECCCCCEEEEECC--------CCCeEEEEECCCCeEEEEEECCCC---
Confidence 689999853 332222 223345788999999999877642 256899999998887655444432
Q ss_pred ccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C
Q 002209 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D 322 (953)
Q Consensus 244 ~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~ 322 (953)
+..++|+|||+.|+++.. ....|+++|+ +
T Consensus 76 --v~~~~~spdg~~l~~~~~------------------------------------------------~~~~v~v~d~~~ 105 (391)
T 1l0q_A 76 --PQGVAVSPDGKQVYVTNM------------------------------------------------ASSTLSVIDTTS 105 (391)
T ss_dssp --EEEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEETTT
T ss_pred --ccceEECCCCCEEEEEEC------------------------------------------------CCCEEEEEECCC
Confidence 678999999999887610 2256888999 7
Q ss_pred CceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCc
Q 002209 323 GTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGM 401 (953)
Q Consensus 323 g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~ 401 (953)
++....... ..+..++|+|||++|+++... .+.|++||+.+++........ ..+
T Consensus 106 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~-------------~~~ 160 (391)
T 1l0q_A 106 NTVAGTVKTGKSPLGLALSPDGKKLYVTNNG------------DKTVSVINTVTKAVINTVSVG-------------RSP 160 (391)
T ss_dssp TEEEEEEECSSSEEEEEECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEEECC-------------SSE
T ss_pred CeEEEEEeCCCCcceEEECCCCCEEEEEeCC------------CCEEEEEECCCCcEEEEEecC-------------CCc
Confidence 765444333 667889999999999777632 348999999866554332211 223
Q ss_pred cceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCce
Q 002209 402 RSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRT 481 (953)
Q Consensus 402 ~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 481 (953)
..+.|+|||+.+++.. ...+.|+++|+ ..++.............+.|+|||++|++..... ...
T Consensus 161 ~~~~~~~dg~~l~~~~------------~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~-~~~ 224 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVAN------------FDSMSISVIDT---VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK-YFN 224 (391)
T ss_dssp EEEEECTTSSEEEEEE------------TTTTEEEEEET---TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS-SCC
T ss_pred ceEEECCCCCEEEEEe------------CCCCEEEEEEC---CCCeEEEEEecCCCccceEECCCCCEEEEEecCc-CCC
Confidence 5789999998765541 23457999996 4444444444445567789999999998876421 123
Q ss_pred EEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCC
Q 002209 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (953)
Q Consensus 482 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~ 561 (953)
.++++|+.++ +.......... ... +.|+|||++|+..... ...+++||+.+
T Consensus 225 ~v~~~d~~~~--~~~~~~~~~~~-~~~------~~~s~dg~~l~~s~~~--------------------d~~v~v~d~~~ 275 (391)
T 1l0q_A 225 TVSMIDTGTN--KITARIPVGPD-PAG------IAVTPDGKKVYVALSF--------------------XNTVSVIDTAT 275 (391)
T ss_dssp EEEEEETTTT--EEEEEEECCSS-EEE------EEECTTSSEEEEEETT--------------------TTEEEEEETTT
T ss_pred cEEEEECCCC--eEEEEEecCCC-ccE------EEEccCCCEEEEEcCC--------------------CCEEEEEECCC
Confidence 7888898775 32322222211 111 7899999988766421 13599999998
Q ss_pred CceEEEeccCcccce-eeeEeeccCC---ccccccccC--------CEEEEEEecCCCCceEEEEECCCCCeeEEecCCC
Q 002209 562 GSKERIWESDKEKYY-ETTVALMSDQ---TEGDLYLNQ--------LKILTSKESKTENTQYYIQSWPDKKSCQITDFPH 629 (953)
Q Consensus 562 ~~~~~l~~~~~~~~~-~~~~~~~~~~---~~~~~s~dg--------~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~~~~ 629 (953)
++...........+. .......... ....|+.+. ..+.|.. .......|.|+..+|......+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~--~~~~~~~~~W~~~~g~~~~~~~--- 350 (391)
T 1l0q_A 276 NTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTD--LSKDATEWKWDFGDGSSSKKQN--- 350 (391)
T ss_dssp TEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEE--CCBSCSEEEEECSSSCEECSSS---
T ss_pred CcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEe--CCCCceEEEEECCCCcccCcCC---
Confidence 887665443322100 0000110000 011233322 1133432 2234568889988876432211
Q ss_pred CCCCcC--CCceEEEEEEcCCC--cEEEEEEEcCC
Q 002209 630 PYPQLA--SLQKELIKYQRKDG--VQLSATLYLPP 660 (953)
Q Consensus 630 ~~~~~~--~~~~~~~~~~~~dg--~~~~~~l~~P~ 660 (953)
+...+. ..-...+++.+.+| .++....+.++
T Consensus 351 ~~~~~~~~g~y~~~~~~~~~~g~~~~~~~~~v~~~ 385 (391)
T 1l0q_A 351 PTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLK 385 (391)
T ss_dssp CEECCSSCEEEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred CeEEeCCCceEEEEEEEECCCCcEEEEEEEEEEcC
Confidence 111222 22245677788888 35555555543
No 103
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.75 E-value=8.4e-18 Score=189.11 Aligned_cols=229 Identities=12% Similarity=0.051 Sum_probs=152.2
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
...+.++++. +|..+.++++.|.+ .++.|+||++||.... ...........++++||.|+
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~--------------~~~~~~~~~~~l~~~G~~V~ 225 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSL--------------QTDMWRLFRDHLAKHDIAML 225 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSC--------------GGGGHHHHHHTTGGGTCEEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCcc--------------HHHHHHHHHHHHHhCCCEEE
Confidence 3577888886 78899999999975 2358999999995311 00111123456778999999
Q ss_pred EcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
.+|+ +|+|.+...... .........+++++.....+|.++|+|+|||+||++++.++..+|++++++|+++|+.+.
T Consensus 226 ~~D~---~G~G~s~~~~~~-~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~ 301 (415)
T 3mve_A 226 TVDM---PSVGYSSKYPLT-EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD 301 (415)
T ss_dssp EECC---TTSGGGTTSCCC-SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH
T ss_pred EECC---CCCCCCCCCCCC-CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc
Confidence 9555 566666432110 111122256777888877788899999999999999999999998999999999987542
Q ss_pred CCCCcCcccc-------------cchhhhhH---HHHHhcCcccc----cCCCCCcEEEEEeCCCCCCCCchHHHHHHHH
Q 002209 797 TLTPFGFQNE-------------DRTLWEAT---STYVEMSPFMS----ANKLKKPILLVHGEEDNNSGTLTMQSDRFFN 856 (953)
Q Consensus 797 ~~~~~~~~~~-------------~~~~~~~~---~~~~~~sp~~~----~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~ 856 (953)
......+... ........ ..+..+++... +.++++|+|++||++|..+| +..+..+++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~l~~ 379 (415)
T 3mve_A 302 IFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSP--YSDNQMVAF 379 (415)
T ss_dssp HHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSC--HHHHHHHHH
T ss_pred ccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCC--HHHHHHHHH
Confidence 1110000000 00000001 11222333222 45789999999999999998 888777665
Q ss_pred HHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 857 ALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 857 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
.+.+++++++++..| ......+...+.+||.++++
T Consensus 380 ----~~~~~~l~~i~g~~~----h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 ----FSTYGKAKKISSKTI----TQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp ----TBTTCEEEEECCCSH----HHHHHHHHHHHHHHHHHHHT
T ss_pred ----hCCCceEEEecCCCc----ccchHHHHHHHHHHHHHHhc
Confidence 455679999998222 12456788899999999874
No 104
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.74 E-value=1.2e-16 Score=164.46 Aligned_cols=181 Identities=15% Similarity=0.112 Sum_probs=135.6
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhh---------hhhhHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---------NDRFVEQL 739 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~---------~~~~~~~~ 739 (953)
+.|+||++||+... ...| ......|++ ||.|+.++. +..|+|.+.. ........
T Consensus 37 ~~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~-g~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 99 (226)
T 2h1i_A 37 SKPVLLLLHGTGGN-----------ELDL----LPLAEIVDS-EASVLSVRG-NVLENGMPRFFRRLAEGIFDEEDLIFR 99 (226)
T ss_dssp TSCEEEEECCTTCC-----------TTTT----HHHHHHHHT-TSCEEEECC-SEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCcEEEEEecCCCC-----------hhHH----HHHHHHhcc-CceEEEecC-cccCCcchhhccccCccCcChhhHHHH
Confidence 47999999996311 1111 233445555 999999643 4456665421 11223445
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHh
Q 002209 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVE 819 (953)
Q Consensus 740 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 819 (953)
+.++.++++++.+...++.++++++|||+||.+++.++.++|++++++|+++|......
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------- 158 (226)
T 2h1i_A 100 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------
T ss_pred HHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------
Confidence 66777777777777777889999999999999999999999999999999998754211
Q ss_pred cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 820 ~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
......+++|+|+++|+.|..++ ...+.++++.++..+.++++ ++++++|.+. .+..+.+.+||.++|
T Consensus 159 ---~~~~~~~~~p~l~~~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 ---MQLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ---CCCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred ---cccccccCCcEEEEeCCCCCcCC--HHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 11223357899999999999998 99999999999998888998 9999999873 345688899998864
No 105
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.74 E-value=1.5e-16 Score=163.79 Aligned_cols=185 Identities=14% Similarity=0.154 Sum_probs=138.0
Q ss_pred CCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH--cCcEEEEcCCC----------------CCCCCCCh
Q 002209 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPTT----------------PIIGEGDE 729 (953)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~V~~~~~~----------------~~~G~G~~ 729 (953)
.+.|+||++||+.... ..| ......|++ +||.|+.++.. +..|+|.+
T Consensus 22 ~~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 86 (226)
T 3cn9_A 22 NADACIIWLHGLGADR-----------TDF----KPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA 86 (226)
T ss_dssp TCCEEEEEECCTTCCG-----------GGG----HHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST
T ss_pred CCCCEEEEEecCCCCh-----------HHH----HHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc
Confidence 3589999999963211 111 234556777 99999997653 44466643
Q ss_pred hhh-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCcccEEEEcccCCCCCCCCcCccccc
Q 002209 730 EAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA-HAPHLFCCGIARSGAYNRTLTPFGFQNED 807 (953)
Q Consensus 730 ~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 807 (953)
... .......++++..+++.+.+ ..++.++++|+|||+||.+++.++. ++|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~-------- 157 (226)
T 3cn9_A 87 RAIDEDQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD-------- 157 (226)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG--------
T ss_pred ccccchhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh--------
Confidence 221 23345667777777777766 3467789999999999999999999 999999999999986432100
Q ss_pred chhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHH
Q 002209 808 RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVL 887 (953)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 887 (953)
+ .. ...++++|+|+++|+.|..+| ++.+.++++.++..+.++++++++ ++|.+. .+..
T Consensus 158 ---~-------~~----~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~ 215 (226)
T 3cn9_A 158 ---L-------AL----DERHKRIPVLHLHGSQDDVVD--PALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEI 215 (226)
T ss_dssp ---C-------CC----CTGGGGCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHH
T ss_pred ---h-------hh----cccccCCCEEEEecCCCCccC--HHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhH
Confidence 0 01 124567899999999999998 999999999999988899999999 999874 2346
Q ss_pred HHHHHHHHHhc
Q 002209 888 WETDRWLQKYC 898 (953)
Q Consensus 888 ~~i~~fl~~~l 898 (953)
+.+.+||.++|
T Consensus 216 ~~i~~~l~~~l 226 (226)
T 3cn9_A 216 HDIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 78999998874
No 106
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.74 E-value=6e-17 Score=168.99 Aligned_cols=203 Identities=14% Similarity=0.056 Sum_probs=143.8
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh---hh-hHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DR-FVEQLVACAEA 745 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~---~~-~~~~~~~D~~~ 745 (953)
.|+||++||..... ..| ......|+++||.|+.+ +.+|+|.+... .. .....++|+.+
T Consensus 22 ~~~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~v~~~---d~~g~g~s~~~~~~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 22 DTGVVLLHAYTGSP-----------NDM----NFMARALQRSGYGVYVP---LFSGHGTVEPLDILTKGNPDIWWAESSA 83 (251)
T ss_dssp SEEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEEC---CCTTCSSSCTHHHHHHCCHHHHHHHHHH
T ss_pred CceEEEeCCCCCCH-----------HHH----HHHHHHHHHCCCEEEec---CCCCCCCCChhhhcCcccHHHHHHHHHH
Confidence 68899999953211 111 34566788899999994 45677776332 12 45666889999
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccc-------------c-----
Q 002209 746 AVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-------------D----- 807 (953)
Q Consensus 746 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~-------------~----- 807 (953)
+++++... .++++++|||+||.+++.++.++|++++++++.+|.............. .
T Consensus 84 ~i~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 3dkr_A 84 AVAHMTAK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQIL 159 (251)
T ss_dssp HHHHHHTT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHH
Confidence 99999876 4699999999999999999999999999999988876532111000000 0
Q ss_pred chhhhhHHHHHhc--CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHH
Q 002209 808 RTLWEATSTYVEM--SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMH 885 (953)
Q Consensus 808 ~~~~~~~~~~~~~--sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 885 (953)
.........+... .....+.++++|+|+++|++|..+| +..+.++++.+... .+++++++++++|.+....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~ 236 (251)
T 3dkr_A 160 AYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVD--GRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHA 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBC--TTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHH
T ss_pred hhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccC--hHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhH
Confidence 0000000001100 1234567789999999999999998 89999998888764 56899999999999865555788
Q ss_pred HHHHHHHHHHHh
Q 002209 886 VLWETDRWLQKY 897 (953)
Q Consensus 886 ~~~~i~~fl~~~ 897 (953)
+.+.+.+||+++
T Consensus 237 ~~~~i~~fl~~~ 248 (251)
T 3dkr_A 237 LEEDVIAFMQQE 248 (251)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 107
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.74 E-value=8.9e-17 Score=166.93 Aligned_cols=189 Identities=14% Similarity=0.125 Sum_probs=133.1
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc-----CcEEEEcCCC----------------CCCCCC
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-----GFAILGGPTT----------------PIIGEG 727 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-----G~~V~~~~~~----------------~~~G~G 727 (953)
+.|+||++||..... ..| ..+...|+.+ ||.|+.++.. +..|.+
T Consensus 22 ~~p~vv~lHG~g~~~-----------~~~----~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 86 (239)
T 3u0v_A 22 HSASLIFLHGSGDSG-----------QGL----RMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKIT 86 (239)
T ss_dssp CCEEEEEECCTTCCH-----------HHH----HHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSS
T ss_pred CCcEEEEEecCCCch-----------hhH----HHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCC
Confidence 589999999952110 001 1234455554 6888986652 222222
Q ss_pred Chhhh-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccc
Q 002209 728 DEEAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE 806 (953)
Q Consensus 728 ~~~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 806 (953)
..... .........++...++.+.+ ..+|.++++|+||||||++++.++.++|+.++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------- 158 (239)
T 3u0v_A 87 NDCPEHLESIDVMCQVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------- 158 (239)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------
Confidence 22111 12345556666666666554 3478899999999999999999999999999999999987542110
Q ss_pred cchhhhhHHHHHhcCcccccCCCCCc-EEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHH
Q 002209 807 DRTLWEATSTYVEMSPFMSANKLKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMH 885 (953)
Q Consensus 807 ~~~~~~~~~~~~~~sp~~~~~~i~~P-~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 885 (953)
.. ..+. ......| +|++||++|..|| ++++.++++.+++.+.+++++++++++|.+. .+
T Consensus 159 ---~~---~~~~-------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~ 218 (239)
T 3u0v_A 159 ---VY---QALQ-------KSNGVLPELFQCHGTADELVL--HSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KT 218 (239)
T ss_dssp ---HH---HHHH-------HCCSCCCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HH
T ss_pred ---HH---HHHH-------hhccCCCCEEEEeeCCCCccC--HHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HH
Confidence 00 0011 1234566 9999999999999 9999999999999999999999999999985 45
Q ss_pred HHHHHHHHHHHhccC
Q 002209 886 VLWETDRWLQKYCVS 900 (953)
Q Consensus 886 ~~~~i~~fl~~~l~~ 900 (953)
..+.+.+||.+++..
T Consensus 219 ~~~~~~~~l~~~l~~ 233 (239)
T 3u0v_A 219 ELDILKLWILTKLPG 233 (239)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhCCC
Confidence 578899999999853
No 108
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.73 E-value=1.7e-17 Score=179.98 Aligned_cols=226 Identities=17% Similarity=0.118 Sum_probs=153.2
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCcEEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAIL 716 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~ 716 (953)
..+.+++++.+| .+.+++| |. .++.|+||++|||.+.. +....+ ......|+ ..||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~--------g~~~~~----~~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVI--------CSIESH----DALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTS--------CCTGGG----HHHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCccccc--------CChhHh----HHHHHHHHHHhCCEEE
Confidence 478888988887 8999998 42 23489999999975322 111111 23455677 5899999
Q ss_pred EcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCCc----ccEEEE
Q 002209 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIA 789 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~ 789 (953)
.+++ +|.|.+.. .....|+.++++|+.+. ..+|+++|+|+|+|+||++++.++.+.|++ ++++|+
T Consensus 115 ~~dy---rg~g~~~~-----p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (311)
T 1jji_A 115 SVDY---RLAPEHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EEEC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred EecC---CCCCCCCC-----CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 9666 46665432 34567888888888765 246778999999999999999999887655 999999
Q ss_pred cccCCCCCCCCcCcccc-cchh-hh--h----HHHH---------HhcCccc-ccCCCCCcEEEEEeCCCCCCCCchHHH
Q 002209 790 RSGAYNRTLTPFGFQNE-DRTL-WE--A----TSTY---------VEMSPFM-SANKLKKPILLVHGEEDNNSGTLTMQS 851 (953)
Q Consensus 790 ~~~~~d~~~~~~~~~~~-~~~~-~~--~----~~~~---------~~~sp~~-~~~~i~~P~Li~~G~~D~~v~~~~~~~ 851 (953)
++|+.+.......+... .... +. . ...| ...+|+. .+..+ .|+||+||+.|..+ .++
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~----~~~ 261 (311)
T 1jji_A 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR----DEG 261 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH----HHH
T ss_pred eCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch----HHH
Confidence 99987753211000000 0000 00 0 0001 0123332 12222 59999999999874 567
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHH
Q 002209 852 DRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQK 896 (953)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~ 896 (953)
.+++++++..++++++++++|++|.+.. .+....+.+.+.+||.+
T Consensus 262 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 262 EVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 8899999999999999999999998743 23456777888888764
No 109
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.73 E-value=8.1e-17 Score=175.79 Aligned_cols=216 Identities=8% Similarity=0.030 Sum_probs=145.6
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCcEEEEcCCCCCCCCCChh
Q 002209 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEE 730 (953)
Q Consensus 652 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~~~G~G~~~ 730 (953)
+.++++.|.+ ++.|+||++|||.+..+ ... ........|+ +.||.|+.+|+++. +.
T Consensus 84 ~~~~~~~p~~------~~~p~vv~lHGgg~~~~--------~~~----~~~~~~~~la~~~g~~vi~~D~r~~---~~-- 140 (326)
T 3d7r_A 84 MQVFRFNFRH------QIDKKILYIHGGFNALQ--------PSP----FHWRLLDKITLSTLYEVVLPIYPKT---PE-- 140 (326)
T ss_dssp EEEEEEESTT------CCSSEEEEECCSTTTSC--------CCH----HHHHHHHHHHHHHCSEEEEECCCCT---TT--
T ss_pred EEEEEEeeCC------CCCeEEEEECCCcccCC--------CCH----HHHHHHHHHHHHhCCEEEEEeCCCC---CC--
Confidence 5667788864 23699999999753211 000 1122344565 46999999777542 21
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----ccEEEEcccCCCCCCCCcCcc-c
Q 002209 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQ-N 805 (953)
Q Consensus 731 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~d~~~~~~~~~-~ 805 (953)
..+...++|+.++++++.+. ++.++++|+||||||.+|+.++.++|++ ++++|+++|+.+......... .
T Consensus 141 ---~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 215 (326)
T 3d7r_A 141 ---FHIDDTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA 215 (326)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH
T ss_pred ---CCchHHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh
Confidence 12356688999999999877 6778999999999999999999987766 999999999877543221111 0
Q ss_pred c---cc-----hhhhhHHHHHh--------cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEE
Q 002209 806 E---DR-----TLWEATSTYVE--------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (953)
Q Consensus 806 ~---~~-----~~~~~~~~~~~--------~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (953)
. .. ........|.. .+|+...-...+|+||+||++|.. ..++.++.++++..+.++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~----~~~~~~~~~~l~~~~~~~~~~~ 291 (326)
T 3d7r_A 216 LIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMT----HPDMKLFEQMMLQHHQYIEFYD 291 (326)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccc----hHHHHHHHHHHHHCCCcEEEEE
Confidence 0 00 00000111111 123221111235999999999953 6678889999999999999999
Q ss_pred eCCCCccCCC--cccHHHHHHHHHHHHHHhcc
Q 002209 870 LPFESHGYAA--RESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 870 ~~~~~H~~~~--~~~~~~~~~~i~~fl~~~l~ 899 (953)
+|+++|.+.. .+....+.+.+.+||.+++.
T Consensus 292 ~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 292 YPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp ETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred eCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 9999998753 25567888999999987763
No 110
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.73 E-value=2.5e-17 Score=178.10 Aligned_cols=228 Identities=15% Similarity=0.128 Sum_probs=147.0
Q ss_pred eEEEEEE---cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEE
Q 002209 639 KELIKYQ---RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (953)
Q Consensus 639 ~~~~~~~---~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V 715 (953)
...++|. ..+|..+.+++|.|++.. .+.|+||++||+..... .+.......++++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~----~~~p~vv~lHG~~~~~~--------------~~~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYT----PDRPVVVVQHGVLRNGA--------------DYRDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCC----TTSCEEEEECCTTCCHH--------------HHHHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCC----CCCcEEEEeCCCCCCHH--------------HHHHHHHHHHHHCCcEE
Confidence 3456666 678889999999998642 24799999999642210 01012345677899999
Q ss_pred EEcCCCCC---------CCC--CChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-c
Q 002209 716 LGGPTTPI---------IGE--GDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-L 783 (953)
Q Consensus 716 ~~~~~~~~---------~G~--G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~ 783 (953)
+.++++.. .|+ |.+..........+.|+.++++++.++..+|.++|+|+||||||.+++.++.++|+ +
T Consensus 86 ~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 86 VAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp EEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred EEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 99887632 032 33322111112344678889999988877889999999999999999999999985 7
Q ss_pred ccEEEEcc-cCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCc---------------
Q 002209 784 FCCGIARS-GAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTL--------------- 847 (953)
Q Consensus 784 ~~a~v~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~--------------- 847 (953)
++++|+.+ |.++.......+...... . ..+|......++.|+|++||+.|..+..+
T Consensus 166 ~~~~vl~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~ 237 (304)
T 3d0k_A 166 FHAVTAANPGWYTLPTFEHRFPEGLDG-V-------GLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHR 237 (304)
T ss_dssp CSEEEEESCSSCCCSSTTSBTTTSSBT-T-------TCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSH
T ss_pred eEEEEEecCcccccCCccccCccccCC-C-------CCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccH
Confidence 88888655 554422111000000000 0 01222223334689999999999874100
Q ss_pred hHHHHHHHHHHH----hCCCc--EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 848 TMQSDRFFNALK----GHGAL--CRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 848 ~~~~~~~~~~l~----~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
...+.++++.++ ..+.+ ++++++||++|.+ ......+.+||....
T Consensus 238 ~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~------~~~~~~~~~~~~~~~ 288 (304)
T 3d0k_A 238 YARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDG------QAMSQVCASLWFDGR 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCH------HHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCch------HHHHHHHHHHHhhhh
Confidence 244667777776 56776 8999999999987 244567788876543
No 111
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.73 E-value=2e-16 Score=160.00 Aligned_cols=199 Identities=15% Similarity=0.096 Sum_probs=138.2
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccch--HHHHHHHcCcEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGST--SVLLWLARGFAI 715 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~la~~G~~V 715 (953)
..+...+. .+|.++++++|.|.+ +.|+||++||+.... ..+ .. ....|+++||.|
T Consensus 3 ~~~~~~~~-~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~~-----------~~~----~~~~~~~~l~~~G~~v 59 (207)
T 3bdi_A 3 ALQEEFID-VNGTRVFQRKMVTDS-------NRRSIALFHGYSFTS-----------MDW----DKADLFNNYSKIGYNV 59 (207)
T ss_dssp CCEEEEEE-ETTEEEEEEEECCTT-------CCEEEEEECCTTCCG-----------GGG----GGGTHHHHHHTTTEEE
T ss_pred cceeEEEe-eCCcEEEEEEEeccC-------CCCeEEEECCCCCCc-----------ccc----chHHHHHHHHhCCCeE
Confidence 33444444 488999999999864 268999999964211 111 23 567788999999
Q ss_pred EEcCCCCCCCCCCh---hhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEccc
Q 002209 716 LGGPTTPIIGEGDE---EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (953)
Q Consensus 716 ~~~~~~~~~G~G~~---~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (953)
+.+++ +|+|.+ ....... ..+.++.+.+..+.+. .+.++++++|||+||.+++.++.++|++++++|+++|
T Consensus 60 ~~~d~---~g~g~s~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~ 133 (207)
T 3bdi_A 60 YAPDY---PGFGRSASSEKYGIDR-GDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAP 133 (207)
T ss_dssp EEECC---TTSTTSCCCTTTCCTT-CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred EEEcC---CcccccCcccCCCCCc-chHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCC
Confidence 99655 466665 3321100 0233333444444433 2346999999999999999999999999999999988
Q ss_pred CCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC
Q 002209 793 AYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (953)
Q Consensus 793 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 872 (953)
.... . + ...+.++++|+|+++|++|..++ +..+.++++.+. +++++++++
T Consensus 134 ~~~~---~--~-------------------~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~ 183 (207)
T 3bdi_A 134 AWVE---S--L-------------------KGDMKKIRQKTLLVWGSKDHVVP--IALSKEYASIIS----GSRLEIVEG 183 (207)
T ss_dssp CSCG---G--G-------------------HHHHTTCCSCEEEEEETTCTTTT--HHHHHHHHHHST----TCEEEEETT
T ss_pred cccc---c--h-------------------hHHHhhccCCEEEEEECCCCccc--hHHHHHHHHhcC----CceEEEeCC
Confidence 6211 0 0 12345678999999999999998 888888887773 358999999
Q ss_pred CCccCCCcccHHHHHHHHHHHHHH
Q 002209 873 ESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 873 ~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
++|.+. .+....+.+.+.+||++
T Consensus 184 ~~H~~~-~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 184 SGHPVY-IEKPEEFVRITVDFLRN 206 (207)
T ss_dssp CCSCHH-HHSHHHHHHHHHHHHHT
T ss_pred CCCCcc-ccCHHHHHHHHHHHHhh
Confidence 999863 34456677778888764
No 112
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.72 E-value=1e-16 Score=172.94 Aligned_cols=238 Identities=13% Similarity=0.079 Sum_probs=154.1
Q ss_pred ceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 638 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
.++.+++.+. .|.++.++ +.|. + .++|+||++||++... ....|... ......+++.||+|+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~-~-----~~~p~vvllHG~~~~~---------~~~~w~~~-~~~~~~~~~~~~~vv 70 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSG-G-----ANSPALYLLDGLRAQD---------DFSGWDIN-TPAFEWYDQSGLSVV 70 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC-S-----TTBCEEEEECCTTCCS---------SSCHHHHH-CCHHHHHTTSSCEEE
T ss_pred eEEEEEEECccCCCceEEE-ECCC-C-----CCCCEEEEeCCCCCCC---------CcchhhcC-CCHHHHHhcCCeEEE
Confidence 4677778765 46677766 4443 2 2489999999963100 00111100 012345667899999
Q ss_pred EcCCCCCCCCCChhh---------hhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEE
Q 002209 717 GGPTTPIIGEGDEEA---------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~---------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (953)
+++..+..++..... ...+.....+|+... +.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 71 ~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 147 (304)
T 1sfr_A 71 MPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGW---LQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYA 147 (304)
T ss_dssp EECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHH---HHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred EECCCCCccccccCCccccccccccccHHHHHHHHHHHH---HHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEE
Confidence 988754333321100 112222223444444 44433467789999999999999999999999999999
Q ss_pred EEcccCCCCCCCCcCc------ccc----cchhhh--hHHHHHhcCcccccCCC---CCcEEEEEeCCCC----------
Q 002209 788 IARSGAYNRTLTPFGF------QNE----DRTLWE--ATSTYVEMSPFMSANKL---KKPILLVHGEEDN---------- 842 (953)
Q Consensus 788 v~~~~~~d~~~~~~~~------~~~----~~~~~~--~~~~~~~~sp~~~~~~i---~~P~Li~~G~~D~---------- 842 (953)
|+++|.++.....+.. ... ....|. ....+...+|...+.++ +.|+|++||+.|.
T Consensus 148 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~ 227 (304)
T 1sfr_A 148 GAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPA 227 (304)
T ss_dssp EEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHH
T ss_pred EEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCcccccccccc
Confidence 9999987643211000 000 000010 12245566777666555 5899999999998
Q ss_pred ----CCCCchHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccC
Q 002209 843 ----NSGTLTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 843 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
.++ ..++++++++|++.| +++++.+|++++|.+. .+...+..+++||.++|..
T Consensus 228 ~~~e~~~--~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~~ 285 (304)
T 1sfr_A 228 KFLEGFV--RTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGA 285 (304)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTC
T ss_pred chhHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcCC
Confidence 556 889999999999999 9999999977799752 3455667889999999864
No 113
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.72 E-value=4.7e-17 Score=190.73 Aligned_cols=237 Identities=21% Similarity=0.198 Sum_probs=162.1
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHH-HHHHHcCcEEEE
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWLARGFAILG 717 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~G~~V~~ 717 (953)
.+.++++..||..|.+.+|.|++ .+++|+||+.||...... .. ..+. ..+ ..|+++||+|+.
T Consensus 9 ~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~~-----~~---~~y~----~~~~~~la~~Gy~vv~ 71 (587)
T 3i2k_A 9 ASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDV-----FA---WSTQ----STNWLEFVRDGYAVVI 71 (587)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCH-----HH---HHTT----TCCTHHHHHTTCEEEE
T ss_pred EEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCcc-----cc---ccch----hhHHHHHHHCCCEEEE
Confidence 46789999999999999999975 235999999987321100 00 0010 013 688999999999
Q ss_pred cCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC-CCC
Q 002209 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA-YNR 796 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~-~d~ 796 (953)
+|+ +|.|.+.+....+....+|+.++++||.++++.+ .+|+++|+||||++++.+++..|+.++|+|+.++. .|.
T Consensus 72 ~D~---RG~G~S~g~~~~~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 72 QDT---RGLFASEGEFVPHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp EEC---TTSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred EcC---CCCCCCCCccccccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 555 5556554432223568999999999999887766 79999999999999999999988999999999988 664
Q ss_pred CCC---CcCcccc-cchhhhh-----------------------------------------------------------
Q 002209 797 TLT---PFGFQNE-DRTLWEA----------------------------------------------------------- 813 (953)
Q Consensus 797 ~~~---~~~~~~~-~~~~~~~----------------------------------------------------------- 813 (953)
... .-+.... ....|..
T Consensus 148 ~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (587)
T 3i2k_A 148 RAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVD 227 (587)
T ss_dssp CCCCSCTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTT
T ss_pred ccceeecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhc
Confidence 321 0000000 0000100
Q ss_pred ----HHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC---------c
Q 002209 814 ----TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA---------R 880 (953)
Q Consensus 814 ----~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---------~ 880 (953)
...|...++...+++|++|+|+++|..|..+ ..+.++|++++..+. .++++-|. .|.... .
T Consensus 228 ~~~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~----~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~ 301 (587)
T 3i2k_A 228 HPDNDESWQSISLFERLGGLATPALITAGWYDGFV----GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGI 301 (587)
T ss_dssp CCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTH----HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCG
T ss_pred CCCCChHHhcCChhhhhccCCCCEEEEccCCCccc----hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCC
Confidence 1123334555677899999999999999764 457889999987765 46777665 465311 1
Q ss_pred cc---HHHHHHHHHHHHHHhccCCC
Q 002209 881 ES---IMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 881 ~~---~~~~~~~i~~fl~~~l~~~~ 902 (953)
.. ..+..+.+++||++||+..+
T Consensus 302 ~~~~~~~~~~~~~~~wFD~~Lkg~~ 326 (587)
T 3i2k_A 302 AATYPIQEATTMHKAFFDRHLRGET 326 (587)
T ss_dssp GGSCCHHHHHHHHHHHHHHHHSCCT
T ss_pred ccccccchhhHHHHHHHHHHhcCCC
Confidence 11 11334889999999998654
No 114
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.72 E-value=1.8e-15 Score=171.41 Aligned_cols=278 Identities=9% Similarity=0.012 Sum_probs=173.5
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCc
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~ 190 (953)
...++|||||++|+....+ +.|++|++.. ... ...+.....
T Consensus 59 ~~~~~~s~~g~~l~~~~~d---------------------------------~~v~i~d~~~----~~~--~~~~~~~~~ 99 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLD---------------------------------GHDFLFNTII----RDG--SKMLKRADY 99 (420)
T ss_dssp CTTCEEEEEETTEEEEEET---------------------------------TEEEEEECCS----EET--TTTSCSCCE
T ss_pred ccceeeeecCCeEEEEEcC---------------------------------CcEEEEEecc----cce--eeEEecCCc
Confidence 4578999999999998875 3679999843 111 111222234
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
.....|+|||+.|+.... ...|.++++++++........... +..++|+|||+.|+...
T Consensus 100 ~~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s-------- 158 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTT---------EGDIKVLDSNFNLQREIDQAHVSE----ITKLKFFPSGEALISSS-------- 158 (420)
T ss_dssp EEEEEECSSSCEEEEEET---------TSCEEEECTTSCEEEEETTSSSSC----EEEEEECTTSSEEEEEE--------
T ss_pred eEEEEEecCCCEEEEEEC---------CCCEEEEeCCCcceeeecccccCc----cEEEEECCCCCEEEEEe--------
Confidence 555679999999998652 557888899888776654333222 77999999999888661
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEeCCC-CcccccccCCCCcEEE
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYIL 347 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDG~~l~ 347 (953)
..+.|.++|+ +++ ...+... ..+..++|+|||+.|+
T Consensus 159 -----------------------------------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 159 -----------------------------------------QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp -----------------------------------------TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred -----------------------------------------CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 2246778888 664 4445444 7788999999999999
Q ss_pred EEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccC--Ccc---------ccccccCccceeeccCCCCceE
Q 002209 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDI--PIA---------FNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~--p~~---------~~~~~~~~~~~~wspDg~~i~~ 415 (953)
..+.+. .|.+||+..+... .+......... ... .......+..++|+|||+.++.
T Consensus 198 s~~~d~-------------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 198 SASLDG-------------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEETTS-------------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEcCCC-------------cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 877443 8999999865443 33322111000 000 0001234567889999987766
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe-ecccccCCeeeccCCc-eEEEEEecccCceEEEEEcCCCCCC
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDDSL-ALVYESWYKTRRTRTWVISPGSKDV 493 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~-~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (953)
. +..+.|.+||+ .++.....+. .....+..++|+|+|+ .|+....++ .|+++|+.++..
T Consensus 265 ~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg----~i~vwd~~~~~~ 325 (420)
T 3vl1_A 265 G-------------HVSGVITVHNV--FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG----MLAQWDLRSPEC 325 (420)
T ss_dssp E-------------ETTSCEEEEET--TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS----EEEEEETTCTTS
T ss_pred E-------------cCCCeEEEEEC--CCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC----eEEEEEcCCCcC
Confidence 5 44567999996 2322223332 2345677899999999 555554332 577777776522
Q ss_pred CcEEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
....+.......+. ..++++|++|+...
T Consensus 326 ~~~~~~~~~~~~v~-------~~~~~~~~~l~s~~ 353 (420)
T 3vl1_A 326 PVGEFLINEGTPIN-------NVYFAAGALFVSSG 353 (420)
T ss_dssp CSEEEEESTTSCEE-------EEEEETTEEEEEET
T ss_pred chhhhhccCCCCce-------EEEeCCCCEEEEec
Confidence 22333322222222 23567887766654
No 115
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.72 E-value=2.8e-16 Score=166.40 Aligned_cols=202 Identities=15% Similarity=0.137 Sum_probs=142.1
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh--hhhHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAV 747 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~~ 747 (953)
.|+||++||..... .. .......|+++||.|+. .+.+|+|.+... .......++|+.+++
T Consensus 40 ~~~vv~~HG~~~~~-----------~~----~~~~~~~l~~~G~~v~~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 40 PVGVLLVHGFTGTP-----------HS----MRPLAEAYAKAGYTVCL---PRLKGHGTHYEDMERTTFHDWVASVEEGY 101 (270)
T ss_dssp SEEEEEECCTTCCG-----------GG----THHHHHHHHHTTCEEEE---CCCTTCSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCh-----------hH----HHHHHHHHHHCCCEEEE---eCCCCCCCCccccccCCHHHHHHHHHHHH
Confidence 58999999963211 11 12456678889999999 555678877543 234667789999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCC-----------Cc------Cccc-----
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-----------PF------GFQN----- 805 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~-----------~~------~~~~----- 805 (953)
+++..+ .++++|+|||+||.+++.++.++|+ ++++|+++|..+.... .+ .+..
T Consensus 102 ~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3rm3_A 102 GWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176 (270)
T ss_dssp HHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCC
T ss_pred HHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHh
Confidence 999765 4699999999999999999999999 9999999986542100 00 0000
Q ss_pred --ccchhhhhHHHHHh--cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc
Q 002209 806 --EDRTLWEATSTYVE--MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE 881 (953)
Q Consensus 806 --~~~~~~~~~~~~~~--~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 881 (953)
...........+.. ......+.++++|+|+++|++|..+| +..+.++++.++. .+++++++|+++|.+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3rm3_A 177 LAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVP--PGNADIIFQGISS--TEKEIVRLRNSYHVATLDY 252 (270)
T ss_dssp CCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHSCC--SSEEEEEESSCCSCGGGST
T ss_pred hcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccC--HHHHHHHHHhcCC--CcceEEEeCCCCcccccCc
Confidence 00000000000000 01224567789999999999999998 8999888887754 3579999999999986444
Q ss_pred cHHHHHHHHHHHHHHhc
Q 002209 882 SIMHVLWETDRWLQKYC 898 (953)
Q Consensus 882 ~~~~~~~~i~~fl~~~l 898 (953)
....+.+.+.+||+++.
T Consensus 253 ~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 253 DQPMIIERSLEFFAKHA 269 (270)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 45788999999999864
No 116
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.72 E-value=1e-17 Score=178.03 Aligned_cols=200 Identities=13% Similarity=0.082 Sum_probs=135.1
Q ss_pred CCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHH----HHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHH
Q 002209 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW----LARGFAILGGPTTPIIGEGDEEANDRFVEQLVACA 743 (953)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----a~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~ 743 (953)
++.|+||++|||.+..+.. . . .........| +++||.|+.+++++. +.. .....+.|+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~------~---~-~~~~~~~~~L~~~a~~~g~~vi~~d~r~~---~~~-----~~~~~~~d~ 100 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPEN------T---P-NDFNQLANTIKSMDTESTVCQYSIEYRLS---PEI-----TNPRNLYDA 100 (273)
T ss_dssp TCCEEEEEECCSTTTCTTC------C---G-GGGHHHHHHHHHHCTTCCEEEEEECCCCT---TTS-----CTTHHHHHH
T ss_pred CCCeEEEEECCCcccCCcC------C---h-HHHHHHHHHHhhhhccCCcEEEEeecccC---CCC-----CCCcHHHHH
Confidence 3589999999975332100 0 0 0112334455 478999999777532 221 123567888
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----------------CCcccEEEEcccCCCCCCCCcCccc-
Q 002209 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-----------------PHLFCCGIARSGAYNRTLTPFGFQN- 805 (953)
Q Consensus 744 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------------p~~~~a~v~~~~~~d~~~~~~~~~~- 805 (953)
.++++++.+. ++.++++|+||||||.+++.++.++ |++++++|+++|+++..........
T Consensus 101 ~~~~~~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 178 (273)
T 1vkh_A 101 VSNITRLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEY 178 (273)
T ss_dssp HHHHHHHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGG
T ss_pred HHHHHHHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccH
Confidence 9999999876 4678999999999999999999885 6789999999987653111000000
Q ss_pred ---------ccchhhh-hHHHHHhcCcc--cccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002209 806 ---------EDRTLWE-ATSTYVEMSPF--MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (953)
Q Consensus 806 ---------~~~~~~~-~~~~~~~~sp~--~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 873 (953)
.....|. ... ..++. .....+++|+|++||++|..|| +++++++++.++..+.++++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~ 253 (273)
T 1vkh_A 179 DCFTRLAFPDGIQMYEEEPS---RVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLG 253 (273)
T ss_dssp HHHHHHHCTTCGGGCCCCHH---HHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHhcccccchhhccc---ccChhhhhcccccCCCEEEEecCCcCCCC--hHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 0000011 100 01110 0112267899999999999998 99999999999999999999999999
Q ss_pred CccCCCcccHHHHHHHHHHHH
Q 002209 874 SHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 874 ~H~~~~~~~~~~~~~~i~~fl 894 (953)
+|.+. .+. ..+.+.+.+||
T Consensus 254 gH~~~-~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 254 LHNDV-YKN-GKVAKYIFDNI 272 (273)
T ss_dssp SGGGG-GGC-HHHHHHHHHTC
T ss_pred ccccc-ccC-hHHHHHHHHHc
Confidence 99874 333 67777777775
No 117
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.72 E-value=2.5e-16 Score=161.70 Aligned_cols=196 Identities=14% Similarity=0.101 Sum_probs=138.1
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCC
Q 002209 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (953)
Q Consensus 648 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G 727 (953)
++..+...++.|.. .+.|+||++||+... ...| ......|+ .||.|+.++..+..+.|
T Consensus 14 ~~~~l~~~~~~~~~------~~~p~vv~lHG~g~~-----------~~~~----~~~~~~l~-~~~~vv~~d~~~~~~~g 71 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK------ESRECLFLLHGSGVD-----------ETTL----VPLARRIA-PTATLVAARGRIPQEDG 71 (223)
T ss_dssp CSSSSCEEEESTTS------SCCCEEEEECCTTBC-----------TTTT----HHHHHHHC-TTSEEEEECCSEEETTE
T ss_pred cCCCceEEEeCCCC------CCCCEEEEEecCCCC-----------HHHH----HHHHHhcC-CCceEEEeCCCCCcCCc
Confidence 34456655554432 124899999996311 1111 12344454 49999997753211101
Q ss_pred Chh--------hhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCC
Q 002209 728 DEE--------ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT 799 (953)
Q Consensus 728 ~~~--------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~ 799 (953)
.++ ...........|+.++++++.++..+|+++++|+|||+||.+++.++.++|++++++|+++|......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~- 150 (223)
T 3b5e_A 72 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH- 150 (223)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-
T ss_pred cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc-
Confidence 111 11223456678888888888777567889999999999999999999999999999999998754210
Q ss_pred CcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC
Q 002209 800 PFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA 879 (953)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 879 (953)
......+++|+|++||++|..|| ++.++ +++.++..+.++++++++ ++|.+.
T Consensus 151 -----------------------~~~~~~~~~P~li~~G~~D~~v~--~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~- 202 (223)
T 3b5e_A 151 -----------------------VPATDLAGIRTLIIAGAADETYG--PFVPA-LVTLLSRHGAEVDARIIP-SGHDIG- 202 (223)
T ss_dssp -----------------------CCCCCCTTCEEEEEEETTCTTTG--GGHHH-HHHHHHHTTCEEEEEEES-CCSCCC-
T ss_pred -----------------------cccccccCCCEEEEeCCCCCcCC--HHHHH-HHHHHHHCCCceEEEEec-CCCCcC-
Confidence 01223467899999999999998 99999 999999999999999999 899884
Q ss_pred cccHHHHHHHHHHHHHHhc
Q 002209 880 RESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 880 ~~~~~~~~~~i~~fl~~~l 898 (953)
.+..+.+.+||++.+
T Consensus 203 ----~~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 203 ----DPDAAIVRQWLAGPI 217 (223)
T ss_dssp ----HHHHHHHHHHHHCC-
T ss_pred ----HHHHHHHHHHHHhhh
Confidence 233567888987654
No 118
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.72 E-value=1.5e-16 Score=166.58 Aligned_cols=180 Identities=17% Similarity=0.108 Sum_probs=130.3
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhh---------hhhhHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---------NDRFVEQL 739 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~---------~~~~~~~~ 739 (953)
+.|+||++||+.... ..| ......|+ .+|.|+.++. +..|+|.+.. ........
T Consensus 61 ~~p~vv~~HG~~~~~-----------~~~----~~~~~~l~-~~~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 123 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDE-----------NQF----FDFGARLL-PQATILSPVG-DVSEHGAARFFRRTGEGVYDMVDLERA 123 (251)
T ss_dssp TSCEEEEECCTTCCH-----------HHH----HHHHHHHS-TTSEEEEECC-SEEETTEEESSCBCGGGCBCHHHHHHH
T ss_pred CCcEEEEEeCCCCCH-----------hHH----HHHHHhcC-CCceEEEecC-CcCCCCCcccccCCCCCcCCHHHHHHH
Confidence 479999999963110 001 12233344 4699999743 4455554321 11224455
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHh
Q 002209 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVE 819 (953)
Q Consensus 740 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 819 (953)
+.|+.++++++.++. +.++++|+||||||++++.++.++|++++++|+++|..+...
T Consensus 124 ~~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------------------- 180 (251)
T 2r8b_A 124 TGKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------------------
T ss_pred HHHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------------------
Confidence 788888888887654 678999999999999999999999999999999998754321
Q ss_pred cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 820 ~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
......+++|+|++||++|..++ ++.+.+++++++..+.++++ .+++++|.+. .+..+.+.+||.++++
T Consensus 181 ---~~~~~~~~~P~li~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 181 ---KISPAKPTRRVLITAGERDPICP--VQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp ---CCCCCCTTCEEEEEEETTCTTSC--HHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC-
T ss_pred ---cccccccCCcEEEeccCCCccCC--HHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhcC
Confidence 11223467899999999999998 99999999999987777777 5666799873 3346788999998874
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.2e-15 Score=169.28 Aligned_cols=274 Identities=8% Similarity=0.041 Sum_probs=179.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+....+ +.|.+|++.+ + .....+.. ...
T Consensus 34 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~vwd~~~-~--~~~~~~~~--h~~ 75 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKD---------------------------------SSASVWYSLN-G--ERLGTLDG--HTG 75 (369)
T ss_dssp CEEEEEECTTSCEEEEEESS---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred eEEEEEEcCCCCEEEEEeCC---------------------------------CEEEEEeCCC-c--hhhhhhhh--cCC
Confidence 56788999999999988764 3679999853 2 22333432 234
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..+.|+|||+.|+.... ...|.++|+.+++.......... +..+.|+|||+.|++......
T Consensus 76 ~v~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~~--- 138 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSA---------DYSIKLWDVSNGQCVATWKSPVP-----VKRVEFSPCGNYFLAILDNVM--- 138 (369)
T ss_dssp CEEEEEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECSSC-----EEEEEECTTSSEEEEEECCBT---
T ss_pred cEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCcEEEEeecCCC-----eEEEEEccCCCEEEEecCCcc---
Confidence 6889999999999988652 56899999998887655543332 778999999999987722100
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC------------ceeEeCCC---Cc
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG------------TVKEIGPP---AV 333 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g------------~~~~l~~~---~~ 333 (953)
. ..+.|.++++ .+ ....+... ..
T Consensus 139 --------------------------------~---------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 139 --------------------------------K---------NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp --------------------------------T---------BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred --------------------------------C---------CCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 0 1134445554 22 11112111 26
Q ss_pred ccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC-ce-EEEeccCCCcccCCccccccccCccceeeccCCC
Q 002209 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (953)
Q Consensus 334 ~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g-~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~ 411 (953)
+..++|+|||+.|+....+ +.|.+||+.. .. ...+..+. ..+..++|+|||+
T Consensus 178 ~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKD-------------GKISKYDVSNNYEYVDSIDLHE-------------KSISDMQFSPDLT 231 (369)
T ss_dssp EEEEEECGGGCEEEEEETT-------------SEEEEEETTTTTEEEEEEECCS-------------SCEEEEEECTTSS
T ss_pred eeEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCcEeEEEEecCC-------------CceeEEEECCCCC
Confidence 7889999999999887743 3899999985 33 33333321 3346799999999
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccC----------ce
Q 002209 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTR----------RT 481 (953)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~----------~~ 481 (953)
.++.. +..+.+.+||+ ..++..........+..+.|+|+|+.+++....+.. ..
T Consensus 232 ~l~~~-------------~~d~~i~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 232 YFITS-------------SRDTNSFLVDV---STLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp EEEEE-------------ETTSEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred EEEEe-------------cCCceEEEEEC---CCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 77665 44568999996 444444444456667789999999999988754421 11
Q ss_pred EEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 482 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
.+.+++..++ +...........+.. +.|+|||++|+....
T Consensus 296 ~i~~~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 296 EARFYHKIFE--EEIGRVQGHFGPLNT------VAISPQGTSYASGGE 335 (369)
T ss_dssp EEEEEETTTC--CEEEEEECCSSCEEE------EEECTTSSEEEEEET
T ss_pred eeEEEecCCC--cchhheecccCcEEE------EEECCCCCEEEEEcC
Confidence 4666666664 333333333333333 789999999887763
No 120
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.72 E-value=2.2e-16 Score=174.79 Aligned_cols=285 Identities=10% Similarity=0.043 Sum_probs=163.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++||..+.+ .. ...++.|++|+..+ +...............
T Consensus 44 ~V~~v~fSpDG~~las~s~d-----------------------~~----~~wd~~v~~~~~~~-~~~~~~~~~~~~~~~~ 95 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSL-----------------------SS----RTWGGSIWVFKDPE-GAPNESLCTAGVQTEA 95 (357)
T ss_dssp EEEEEEECSSSCEEEEEECS-----------------------SS----SSCCEEEEEESSCC----CGGGCSEEEECSS
T ss_pred CEEEEEECCCCCEEEEEcCC-----------------------CC----ccccCeEEEEECCC-CCcceeEecccCCCCC
Confidence 46789999999999998764 10 11124688988743 2211111111111223
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+...+|+||++.|+- . . ...|.++|+.+++...+...........+..++|+|||+.|+...
T Consensus 96 ~V~~~~~s~d~~~l~~-s-------~--dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs------- 158 (357)
T 4g56_B 96 GVTDVAWVSEKGILVA-S-------D--SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG------- 158 (357)
T ss_dssp CEEEEEEETTTEEEEE-E-------T--TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-------
T ss_pred CEEEEEEcCCCCEEEE-E-------C--CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-------
Confidence 5889999999975543 2 1 345777787776543322111111122377899999999998661
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDG~~l 346 (953)
..+.|.++|+ +++.. .+... ..+..++|+|+++.+
T Consensus 159 ------------------------------------------~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 159 ------------------------------------------KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 2245667788 77543 34433 678889999999755
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
+++... .+.|.+||+..++........ .....+..++|+||+..++...
T Consensus 197 ~~s~~~------------dg~v~~wd~~~~~~~~~~~~~----------~~~~~v~~v~~sp~~~~~la~g--------- 245 (357)
T 4g56_B 197 FLSCGE------------DGRILLWDTRKPKPATRIDFC----------ASDTIPTSVTWHPEKDDTFACG--------- 245 (357)
T ss_dssp EEEEET------------TSCEEECCTTSSSCBCBCCCT----------TCCSCEEEEEECTTSTTEEEEE---------
T ss_pred eeeecc------------CCceEEEECCCCceeeeeeec----------cccccccchhhhhcccceEEEe---------
Confidence 444422 238999999754432211111 1112345789999987655441
Q ss_pred cccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccc
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDV 506 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 506 (953)
+....|.+||+ .++.....+......+..++|||||+.++++...++ .|+++|+.++ +.... ......+
T Consensus 246 ---~~d~~i~~wd~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~---~i~iwd~~~~--~~~~~-~~H~~~V 314 (357)
T 4g56_B 246 ---DETGNVSLVNI--KNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC---TVAVLDADFS--EVFRD-LSHRDFV 314 (357)
T ss_dssp ---ESSSCEEEEES--SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS---CEEEECTTSC--EEEEE-CCCSSCE
T ss_pred ---ecccceeEEEC--CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC---EEEEEECCCC--cEeEE-CCCCCCE
Confidence 33457889996 333344556666677888999999865444333332 3566677764 22222 2233333
Q ss_pred cCCCCCCCeEecc-CCCEEEEEee
Q 002209 507 YSDPGSPMMRRTS-TGTYVIAKIK 529 (953)
Q Consensus 507 ~~~~~~p~~~~Sp-DG~~l~~~~~ 529 (953)
.. ++||| ||+.|+....
T Consensus 315 ~~------vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 315 TG------VAWSPLDHSKFTTVGW 332 (357)
T ss_dssp EE------EEECSSSTTEEEEEET
T ss_pred EE------EEEeCCCCCEEEEEcC
Confidence 33 88998 8888877653
No 121
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.5e-15 Score=170.11 Aligned_cols=283 Identities=11% Similarity=0.139 Sum_probs=176.5
Q ss_pred CCCCCCceecCCCC-EEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEc----cCCCCC----Cc
Q 002209 108 APPLPALSFSPQRD-KILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQL----FPDGKL----GQ 178 (953)
Q Consensus 108 ~~~~~~~~~SPDG~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~----~~~g~~----~~ 178 (953)
...+..++|||||+ +||....+ +.|.+|++ .+ +.. ..
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~~~-~~~~~~~~~ 90 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKN---------------------------------SVARLARIVETDQE-GKKYWKLTI 90 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETB---------------------------------TEEEEEEEEEC-------CEEEEE
T ss_pred cCceEEEEECCCCCcEEEEecCC---------------------------------ceEEEEEEecccCC-ccccccccc
Confidence 34688999999999 88887764 25788887 43 210 01
Q ss_pred eeeeec-CC-------CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceE
Q 002209 179 EIEIQG-FP-------DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFV 250 (953)
Q Consensus 179 ~~~l~~-~~-------~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~ 250 (953)
...+.. +. ....+..+.|+|||+.|+.... ...|.+++..+.....+..+... +..+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~i~~~~~~~~~~~~~~~~~-----v~~~~ 156 (425)
T 1r5m_A 91 IAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE---------NGELRLWNKTGALLNVLNFHRAP-----IVSVK 156 (425)
T ss_dssp EEEEECCCCCC------CBCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCCSC-----EEEEE
T ss_pred cccccccccccccccCCCCceEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCeeeeccCCCcc-----EEEEE
Confidence 222221 10 1236889999999999998652 44677778555555555433332 77899
Q ss_pred EecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-Ee
Q 002209 251 WVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EI 328 (953)
Q Consensus 251 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l 328 (953)
|+|||+.|++.. ..+.|.++++ +++.. .+
T Consensus 157 ~~~~~~~l~~~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 157 WNKDGTHIISMD-------------------------------------------------VENVTILWNVISGTVMQHF 187 (425)
T ss_dssp ECTTSSEEEEEE-------------------------------------------------TTCCEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEe-------------------------------------------------cCCeEEEEECCCCcEEEEe
Confidence 999999888761 1234666676 55432 22
Q ss_pred CCC-Cc---------------ccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCC
Q 002209 329 GPP-AV---------------YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIP 391 (953)
Q Consensus 329 ~~~-~~---------------~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p 391 (953)
... .. +..+.|+|++. ++....+ +.|.+||+..+... .+..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------g~i~~~d~~~~~~~~~~~~~------- 246 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK-------------GAIFVYQITEKTPTGKLIGH------- 246 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTE-EEEECGG-------------GCEEEEETTCSSCSEEECCC-------
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC-------------CeEEEEEcCCCceeeeeccC-------
Confidence 222 22 78899999976 4444423 38999999864332 22221
Q ss_pred ccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEE
Q 002209 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALV 471 (953)
Q Consensus 392 ~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~ 471 (953)
...+..++|+||++.++.. +..+.+.+|++ ..+.....+..+...+..+.|+||| .|+
T Consensus 247 ------~~~i~~~~~~~~~~~l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 247 ------HGPISVLEFNDTNKLLLSA-------------SDDGTLRIWHG--GNGNSQNCFYGHSQSIVSASWVGDD-KVI 304 (425)
T ss_dssp ------SSCEEEEEEETTTTEEEEE-------------ETTSCEEEECS--SSBSCSEEECCCSSCEEEEEEETTT-EEE
T ss_pred ------CCceEEEEECCCCCEEEEE-------------cCCCEEEEEEC--CCCccceEecCCCccEEEEEECCCC-EEE
Confidence 1334679999999966655 34567899986 3333445555566677889999999 655
Q ss_pred EEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCC
Q 002209 472 YESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNI 551 (953)
Q Consensus 472 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (953)
....++ .|.++++.++ +...........+.. +.|+|||++|+....+
T Consensus 305 ~~~~d~----~i~i~d~~~~--~~~~~~~~~~~~i~~------~~~s~~~~~l~~~~~d--------------------- 351 (425)
T 1r5m_A 305 SCSMDG----SVRLWSLKQN--TLLALSIVDGVPIFA------GRISQDGQKYAVAFMD--------------------- 351 (425)
T ss_dssp EEETTS----EEEEEETTTT--EEEEEEECTTCCEEE------EEECTTSSEEEEEETT---------------------
T ss_pred EEeCCC----cEEEEECCCC--cEeEecccCCccEEE------EEEcCCCCEEEEEECC---------------------
Confidence 554332 5777777664 333333332222222 7899999998877632
Q ss_pred CeEEEEECCCCc
Q 002209 552 PFLDLFDINTGS 563 (953)
Q Consensus 552 ~~L~~~d~~~~~ 563 (953)
..|++||+.+++
T Consensus 352 g~i~i~~~~~~~ 363 (425)
T 1r5m_A 352 GQVNVYDLKKLN 363 (425)
T ss_dssp SCEEEEECHHHH
T ss_pred CeEEEEECCCCc
Confidence 138888887665
No 122
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.71 E-value=6.3e-16 Score=165.70 Aligned_cols=211 Identities=15% Similarity=0.117 Sum_probs=136.7
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc----C
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR----G 712 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~----G 712 (953)
-..+.++|.+.+| .+.+++|+|+++++++ ++|+|+++||++.....+. ............|+++ +
T Consensus 39 g~~~~~~~~s~~~-~~~~~vy~P~~~~~~~--~~Pvlv~lHG~~~~~~~~~--------~~~~~~~~~~~~l~~~g~~~~ 107 (297)
T 1gkl_A 39 GRIVKETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGGGENENTIF--------SNDVKLQNILDHAIMNGELEP 107 (297)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTCCTTS--CCEEEEEECCTTCCTTSTT--------STTTCHHHHHHHHHHTTSSCC
T ss_pred ceEEEEEEEcCCC-EEEEEEEeCCCCCCCC--CCCEEEEECCCCCCcchhh--------cccchHHHHHHHHHHcCCCCC
Confidence 3567888988876 8999999999886543 5999999999753211000 0000012334556666 4
Q ss_pred cEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcC---------CCCCCcEEEEEeChHHHHHHHHHHhCCCc
Q 002209 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---------VAHPSKIAVGGHSYGAFMTANLLAHAPHL 783 (953)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~---------~~d~~~i~l~G~S~GG~~a~~~a~~~p~~ 783 (953)
|+|+++++++..+. ...+....+.|++..++...... ..|+++++|+|+||||++|+.++.++|++
T Consensus 108 ~ivv~pd~~~~~~~-----~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~ 182 (297)
T 1gkl_A 108 LIVVTPTFNGGNCT-----AQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDY 182 (297)
T ss_dssp EEEEECCSCSTTCC-----TTTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTT
T ss_pred EEEEEecCcCCccc-----hHHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchh
Confidence 99999887543221 22333444555555444321111 03667899999999999999999999999
Q ss_pred ccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCC-
Q 002209 784 FCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG- 862 (953)
Q Consensus 784 ~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g- 862 (953)
|+++++++|.+.+... ..........+... ..+.....++++.+|+.|.. ..+++++.++|++.+
T Consensus 183 f~~~v~~sg~~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~----~~~~~~l~~~L~~~g~ 248 (297)
T 1gkl_A 183 VAYFMPLSGDYWYGNS-------PQDKANSIAEAINR---SGLSKREYFVFAATGSEDIA----YANMNPQIEAMKALPH 248 (297)
T ss_dssp CCEEEEESCCCCBSSS-------HHHHHHHHHHHHHH---HTCCTTSCEEEEEEETTCTT----HHHHHHHHHHHHTSTT
T ss_pred hheeeEeccccccCCc-------cchhhhHHHHHHhh---ccCCcCcEEEEEEeCCCccc----chhHHHHHHHHHHcCC
Confidence 9999999997542110 00000011111111 11222345677789999965 567899999999988
Q ss_pred ---------CcEEEEEeCCCCccC
Q 002209 863 ---------ALCRLVILPFESHGY 877 (953)
Q Consensus 863 ---------~~~~~~~~~~~~H~~ 877 (953)
+++++.++||++|.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 249 FDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp CCBBSCTTTCCEEEEEETTCCSSH
T ss_pred ccccccccCCceEEEECCCCCcCH
Confidence 599999999999975
No 123
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.71 E-value=7.8e-16 Score=169.21 Aligned_cols=244 Identities=16% Similarity=0.149 Sum_probs=153.8
Q ss_pred CCceEEEEEEcCC--C--cEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-H
Q 002209 636 SLQKELIKYQRKD--G--VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-A 710 (953)
Q Consensus 636 ~~~~~~~~~~~~d--g--~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~ 710 (953)
.....++.|.+.| | ..+.+++++|.+. .++.|+|++.||... ... +.+.............|+ +
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~--~~~-----~~ps~~~~~~~~~~~~lal~ 108 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRF--ERN-----DVPSRNNEKNYIYLAAYGNS 108 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCC--STT-----CSGGGCCGGGHHHHHHHTTT
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcC--Ccc-----cCCCcCcccchHHHHHHHHh
Confidence 3456778887765 4 4688999999863 246999999999642 110 111100001123455678 9
Q ss_pred cCcEEEEcCCCCCCCCCChhh---h---hhhHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEEeChHHHHHHHHHHhCCC-
Q 002209 711 RGFAILGGPTTPIIGEGDEEA---N---DRFVEQLVACAEAAVEEVVR-RGVAHPSKIAVGGHSYGAFMTANLLAHAPH- 782 (953)
Q Consensus 711 ~G~~V~~~~~~~~~G~G~~~~---~---~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~- 782 (953)
+||+|+.+|++ |+|.+.. . .......+.|.+.++..+.+ .+..+.++++++|||+||+++++++...|+
T Consensus 109 ~Gy~Vv~~D~r---G~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~ 185 (377)
T 4ezi_A 109 AGYMTVMPDYL---GLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKE 185 (377)
T ss_dssp TCCEEEEECCT---TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCC---CCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhh
Confidence 99999997665 4444422 1 11122334454444444433 343366899999999999999999987543
Q ss_pred ----cccEEEEcccCCCCCCC-------C--c-----C------------ccc-------ccchhhhh--------H---
Q 002209 783 ----LFCCGIARSGAYNRTLT-------P--F-----G------------FQN-------EDRTLWEA--------T--- 814 (953)
Q Consensus 783 ----~~~a~v~~~~~~d~~~~-------~--~-----~------------~~~-------~~~~~~~~--------~--- 814 (953)
.++++++.++++|.... . . + +.. ......+. .
T Consensus 186 ~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 265 (377)
T 4ezi_A 186 YPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEIL 265 (377)
T ss_dssp CTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHH
T ss_pred CCCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhh
Confidence 58899998887762110 0 0 0 000 00000000 0
Q ss_pred ------------HHHHh-----cCc-cc--------ccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002209 815 ------------STYVE-----MSP-FM--------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (953)
Q Consensus 815 ------------~~~~~-----~sp-~~--------~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (953)
..+.+ ..| +. .-..++.|+||+||++|.+|| +.++.++++++++.|. ++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp--~~~~~~l~~~l~~~G~-v~~~ 342 (377)
T 4ezi_A 266 QALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVP--YAGAEMAYHSFRKYSD-FVWI 342 (377)
T ss_dssp HHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSC--HHHHHHHHHHHHTTCS-CEEE
T ss_pred hccCCCHHHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCC--HHHHHHHHHHHHhcCC-EEEE
Confidence 00000 111 00 012467899999999999999 9999999999999999 9999
Q ss_pred EeCC--CCccCCCcccHHHHHHHHHHHHHHhccC
Q 002209 869 ILPF--ESHGYAARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 869 ~~~~--~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
.+++ .+|... .......+++||+++++.
T Consensus 343 ~~~~~~~~H~~~----~~~~~~~~~~wl~~~~~~ 372 (377)
T 4ezi_A 343 KSVSDALDHVQA----HPFVLKEQVDFFKQFERQ 372 (377)
T ss_dssp EESCSSCCTTTT----HHHHHHHHHHHHHHHHTS
T ss_pred EcCCCCCCccCh----HHHHHHHHHHHHHHhhcc
Confidence 9999 899764 245678899999999864
No 124
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.71 E-value=2e-15 Score=182.52 Aligned_cols=273 Identities=14% Similarity=0.104 Sum_probs=177.5
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..++|||||++|||..+.. +++...||++|+++|+..+.+.... . ...++|+ ||+.|+|+.......
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~----G~~~~~i~v~dl~tg~~~~~~~~~~-k----~~~~~Ws-Dg~~l~y~~~~~~~~- 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA----GSDWREIHLMDVESKQPLETPLKDV-K----FSGISWL-GNEGFFYSSYDKPDG- 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS----SCCEEEEEEEETTTCSEEEEEEEEE-E----SCCCEEE-TTTEEEEEESSCCC--
T ss_pred EEEEEEECCCCCEEEEEEecC----CCceEEEEEEECCCCCCCccccCCc-e----eccEEEe-CCCEEEEEEecCccc-
Confidence 566789999999999988643 4556899999999998766532111 0 3478999 999999984332100
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--eeEeCCC-C----cccccccCC
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP-A----VYTSLDPSP 341 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--~~~l~~~-~----~~~~~~~Sp 341 (953)
..........+||++++ ++. .+.+... . ...++.|||
T Consensus 199 -----------------------------------~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp 243 (693)
T 3iuj_A 199 -----------------------------------SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE 243 (693)
T ss_dssp -----------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT
T ss_pred -----------------------------------ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC
Confidence 00000003357999998 553 3455443 3 346789999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCc--eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~--~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~ 419 (953)
||++|++++.... ...+||++|++++ ..+.|+.... ....+ |++||+.++|.++.
T Consensus 244 Dg~~l~~~~~~~~---------~~~~i~~~d~~~~~~~~~~l~~~~~-------------~~~~~-~~~~g~~l~~~t~~ 300 (693)
T 3iuj_A 244 DDRFLLISAANST---------SGNRLYVKDLSQENAPLLTVQGDLD-------------ADVSL-VDNKGSTLYLLTNR 300 (693)
T ss_dssp TSCEEEEEEESSS---------SCCEEEEEETTSTTCCCEEEECSSS-------------SCEEE-EEEETTEEEEEECT
T ss_pred CCCEEEEEEccCC---------CCcEEEEEECCCCCCceEEEeCCCC-------------ceEEE-EeccCCEEEEEECC
Confidence 9999999875431 2348999999755 5566654321 11223 88999998887432
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCCCc---eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcE
Q 002209 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~d~~~~~g~~~---~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (953)
. .....|+.+++ +++.. +.++....... .|+++|+.|++....+. ..+|++++++++ ..+
T Consensus 301 ~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g-~~~l~~~d~~g~--~~~ 363 (693)
T 3iuj_A 301 D---------APNRRLVTVDA---ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA-TARVEQFDYEGK--RVR 363 (693)
T ss_dssp T---------CTTCEEEEEET---TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT-EEEEEEECTTSC--EEE
T ss_pred C---------CCCCEEEEEeC---CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC-eeEEEEEECCCC--eeE
Confidence 1 23568999996 44443 55655544433 99999999999876653 368999999864 333
Q ss_pred EeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccC
Q 002209 497 ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (953)
Q Consensus 497 ~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~ 571 (953)
.+.-.....+.. +++++|++.|+|...+. . ....||.+|+++++.+.+....
T Consensus 364 ~l~~p~~~~~~~------~~~~~d~~~l~~~~ss~--------------~---tP~~l~~~d~~~g~~~~l~~~~ 415 (693)
T 3iuj_A 364 EVALPGLGSVSG------FNGKHDDPALYFGFENY--------------A---QPPTLYRFEPKSGAISLYRASA 415 (693)
T ss_dssp EECCSSSSEEEE------CCCCTTCSCEEEEEECS--------------S---SCCEEEEECTTTCCEEEEECCC
T ss_pred EeecCCCceEEe------eecCCCCCEEEEEecCC--------------C---CCCEEEEEECCCCeEEEEEeCC
Confidence 332221111111 45788999888886422 1 2345999999999888877654
No 125
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.71 E-value=1.7e-16 Score=168.86 Aligned_cols=237 Identities=14% Similarity=0.140 Sum_probs=153.6
Q ss_pred CCceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcE
Q 002209 636 SLQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (953)
Q Consensus 636 ~~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (953)
....+.+++.+. .|.++.++ |+|++ .|+||++||+.... ....|... ......+++.||+
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~-~~P~~--------~p~vvllHG~~~~~---------~~~~w~~~-~~~~~~~~~~~~~ 68 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVA-FLAGG--------PHAVYLLDAFNAGP---------DVSNWVTA-GNAMNTLAGKGIS 68 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-EECCS--------SSEEEEECCSSCCS---------SSCHHHHT-SCHHHHHTTSSSE
T ss_pred CCCEEEEEEECcccCCcceEE-EeCCC--------CCEEEEECCCCCCC---------Chhhhhhc-ccHHHHHhcCCeE
Confidence 345778888875 67889888 78864 27999999963100 00011000 0123456778999
Q ss_pred EEEcCCCCCCCCCChh--hhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEccc
Q 002209 715 ILGGPTTPIIGEGDEE--ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (953)
Q Consensus 715 V~~~~~~~~~G~G~~~--~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (953)
|++++..+..++.... ....+.....+|+... +.++..+|+++++|+|+||||++|+.++.++|++|+++++++|
T Consensus 69 vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg 145 (280)
T 1r88_A 69 VVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDW---LAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSG 145 (280)
T ss_dssp EEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHH---HHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred EEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHH---HHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECC
Confidence 9998874433332110 1112323334444444 4443447778999999999999999999999999999999999
Q ss_pred CCCCCCCCcC------ccc----ccchhhhh--HHHHHhcCcccccCCC---CCcEEEEE----eCCCCC-------CCC
Q 002209 793 AYNRTLTPFG------FQN----EDRTLWEA--TSTYVEMSPFMSANKL---KKPILLVH----GEEDNN-------SGT 846 (953)
Q Consensus 793 ~~d~~~~~~~------~~~----~~~~~~~~--~~~~~~~sp~~~~~~i---~~P~Li~~----G~~D~~-------v~~ 846 (953)
.++....... ... .....|.. ...+...+|+.++.++ +.|+|+.| |+.|.. ++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~- 224 (280)
T 1r88_A 146 FLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEA- 224 (280)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHH-
T ss_pred ccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHH-
Confidence 8764221000 000 00001110 1223455676656555 57999999 999983 46
Q ss_pred chHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 847 LTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 847 ~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
..++++++++|++.| +++++.++++++|.+. .+...+...+.||.+-+.
T Consensus 225 -~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 225 -MGNSRMFYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp -HHHHHHHHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHCCCcceEEEecCCCCcChh---HHHHHHHHHHHHHHHHHh
Confidence 899999999999999 9999999988899763 344556667778777664
No 126
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=4.3e-15 Score=163.87 Aligned_cols=284 Identities=10% Similarity=-0.010 Sum_probs=175.6
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCc
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~ 190 (953)
+..++|||||++|++.... +... ...+.|++||..+ + .....+. .+..
T Consensus 43 ~~~~~~s~dg~~l~~~~~~-----------------------~~~~---~~~~~v~~~d~~~-~--~~~~~~~---~~~~ 90 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQ-----------------------SRKL---DKGGVVYRLDPVT-L--EVTQAIH---NDLK 90 (353)
T ss_dssp EEEEEEETTTTEEEEEECC-----------------------CTTT---EESEEEEEECTTT-C--CEEEEEE---ESSC
T ss_pred ccceEECCCCCEEEEEcCC-----------------------CcCC---CCCccEEEEcCCC-C--eEEEEEe---cCCC
Confidence 4468999999999776653 1000 0114789998743 2 1222222 2235
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc-----cccccceEEecCCeEEEEEecCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-----NAIFDNFVWVNNSTLLVCTIPLL 265 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~-----~~~~~~~~wspDg~~l~~~~~~~ 265 (953)
...+.|+|||++|++... ....|+++|+++++.......+.... ......++|+|||+.++++..
T Consensus 91 ~~~~~~s~dg~~l~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-- 160 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNT--------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-- 160 (353)
T ss_dssp CCSEEEETTTTEEEEEET--------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE--
T ss_pred cceEEECCCCCEEEEEec--------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec--
Confidence 678999999998887653 24589999999888654433322100 001346899999999887610
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCC-C-CcccccccCCC
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-P-AVYTSLDPSPD 342 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~-~-~~~~~~~~SpD 342 (953)
. ....|+++|+ +++...... . .....++||||
T Consensus 161 ------------------------------------~---------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 161 ------------------------------------G---------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp ------------------------------------S---------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred ------------------------------------C---------CCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 0 1356889999 776554433 3 45788999999
Q ss_pred CcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccC
Q 002209 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDG 422 (953)
Q Consensus 343 G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~ 422 (953)
|++|++... .+.+++||+.+++.......... +....+..++|+|||+.+++. .
T Consensus 196 g~~l~~~~~-------------~~~i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~-~---- 249 (353)
T 3vgz_A 196 GKRLYTTNA-------------DGELITIDTADNKILSRKKLLDD--------GKEHFFINISLDTARQRAFIT-D---- 249 (353)
T ss_dssp TTEEEEECT-------------TSEEEEEETTTTEEEEEEECCCS--------SSCCCEEEEEEETTTTEEEEE-E----
T ss_pred CCEEEEEcC-------------CCeEEEEECCCCeEEEEEEcCCC--------CCCcccceEEECCCCCEEEEE-e----
Confidence 999888763 23899999987665433222110 001223468999999976544 1
Q ss_pred CCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC
Q 002209 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (953)
Q Consensus 423 ~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 502 (953)
...+.++++|. ..++........ ....+.|+|||++|+++...+ . .|+++|..++ +........
T Consensus 250 -------~~~~~v~~~d~---~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~-~--~v~~~d~~~~--~~~~~~~~~ 313 (353)
T 3vgz_A 250 -------SKAAEVLVVDT---RNGNILAKVAAP-ESLAVLFNPARNEAYVTHRQA-G--KVSVIDAKSY--KVVKTFDTP 313 (353)
T ss_dssp -------SSSSEEEEEET---TTCCEEEEEECS-SCCCEEEETTTTEEEEEETTT-T--EEEEEETTTT--EEEEEEECC
T ss_pred -------CCCCEEEEEEC---CCCcEEEEEEcC-CCceEEECCCCCEEEEEECCC-C--eEEEEECCCC--eEEEEEecC
Confidence 22468999996 444433322222 235689999999887765433 2 7889998875 222222221
Q ss_pred CccccCCCCCCCeEeccCCCEEEEEeee
Q 002209 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (953)
Q Consensus 503 ~~~~~~~~~~p~~~~SpDG~~l~~~~~~ 530 (953)
. .... +.|+|||++|+.....
T Consensus 314 ~-~~~~------~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 314 T-HPNS------LALSADGKTLYVSVKQ 334 (353)
T ss_dssp S-EEEE------EEECTTSCEEEEEEEC
T ss_pred C-CCCe------EEEcCCCCEEEEEEcc
Confidence 1 1112 7899999988877643
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.71 E-value=6.6e-15 Score=167.63 Aligned_cols=306 Identities=11% Similarity=0.029 Sum_probs=184.4
Q ss_pred CCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCC-ccccccccceEEecCCeEEEEEecCCC
Q 002209 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (953)
Q Consensus 188 ~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~wspDg~~l~~~~~~~~ 266 (953)
+..+..++|+| ++.++++.. ....|+++|+++++..+...... ......+..++|+|||+.++...
T Consensus 122 ~~~~~~~~~s~-~~~~~~~~~--------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~---- 188 (433)
T 3bws_A 122 GFQPKSVRFID-NTRLAIPLL--------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM---- 188 (433)
T ss_dssp SSCBCCCEESS-SSEEEEEBT--------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG----
T ss_pred CCCceEEEEeC-CCeEEEEeC--------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC----
Confidence 34566899999 556666542 23469999999888765432211 00111266789999998777550
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCC
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDE 343 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG 343 (953)
..+.|+++++ +++. ..+... ..+..++|+|||
T Consensus 189 ---------------------------------------------~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (433)
T 3bws_A 189 ---------------------------------------------QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIR 223 (433)
T ss_dssp ---------------------------------------------GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTT
T ss_pred ---------------------------------------------CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCC
Confidence 2356888888 6644 334333 667889999999
Q ss_pred cEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
++|+++... .+.|++||+.++......... ..+..++|+|||+.++........
T Consensus 224 ~~l~~~~~~------------~~~i~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~~~~- 277 (433)
T 3bws_A 224 DLVYCSNWI------------SEDISVIDRKTKLEIRKTDKI-------------GLPRGLLLSKDGKELYIAQFSASN- 277 (433)
T ss_dssp TEEEEEETT------------TTEEEEEETTTTEEEEECCCC-------------SEEEEEEECTTSSEEEEEEEESCT-
T ss_pred CEEEEEecC------------CCcEEEEECCCCcEEEEecCC-------------CCceEEEEcCCCCEEEEEECCCCc-
Confidence 998777622 248999999866543322211 124578999999977665221110
Q ss_pred CcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCC
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS 503 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 503 (953)
. ....+.|++||+ .+++.............++|+|||+.|++....+ . .++++++.++ +........
T Consensus 278 -~---~~~dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~-~--~v~v~d~~~~--~~~~~~~~~- 344 (433)
T 3bws_A 278 -Q---ESGGGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC-S--KIEVYDLKEK--KVQKSIPVF- 344 (433)
T ss_dssp -T---CSCCEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT-T--EEEEEETTTT--EEEEEEECS-
T ss_pred -c---ccCCCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEecCC-C--EEEEEECCCC--cEEEEecCC-
Confidence 0 013558999996 4444444333344566799999999988775443 2 6888888764 222222211
Q ss_pred ccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeec
Q 002209 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALM 583 (953)
Q Consensus 504 ~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 583 (953)
..+.. +.|+|||++|+......+......++.+ .....|++||+.+++.......... +.
T Consensus 345 ~~~~~------~~~s~dg~~l~~~~~~~~~~~~~~~~~g------~~dg~v~~~d~~~~~~~~~~~~~~~-----~~--- 404 (433)
T 3bws_A 345 DKPNT------IALSPDGKYLYVSCRGPNHPTEGYLKKG------LVLGKVYVIDTTTDTVKEFWEAGNQ-----PT--- 404 (433)
T ss_dssp SSEEE------EEECTTSSEEEEEECCCCCTTTCTTSCC------SSCCEEEEEETTTTEEEEEEECSSS-----EE---
T ss_pred CCCCe------EEEcCCCCEEEEEecCCCcccccccccc------ccceEEEEEECCCCcEEEEecCCCC-----Cc---
Confidence 11222 7899999988877642210000000000 0123699999999887766554322 11
Q ss_pred cCCccccccccCCEEEEEEecCCCCceEEEEECC
Q 002209 584 SDQTEGDLYLNQLKILTSKESKTENTQYYIQSWP 617 (953)
Q Consensus 584 ~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 617 (953)
..+|+|||+.+++..... ..++++++.
T Consensus 405 ----~~~~s~dg~~l~~~~~~d---~~i~v~~~~ 431 (433)
T 3bws_A 405 ----GLDVSPDNRYLVISDFLD---HQIRVYRRD 431 (433)
T ss_dssp ----EEEECTTSCEEEEEETTT---TEEEEEEET
T ss_pred ----eEEEcCCCCEEEEEECCC---CeEEEEEec
Confidence 246899999887655422 356776653
No 128
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.70 E-value=1.9e-15 Score=166.45 Aligned_cols=287 Identities=11% Similarity=0.089 Sum_probs=174.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCce--eeeecCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE--IEIQGFPD 187 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~--~~l~~~~~ 187 (953)
.+..++|||||++||..+.+ +.|.||++.. +.. .......+
T Consensus 18 ~v~~l~~sp~g~~las~~~D---------------------------------~~i~iw~~~~----~~~~~~~~~~~~h 60 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD---------------------------------RRIRIWGTEG----DSWICKSVLSEGH 60 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT---------------------------------SCEEEEEEET----TEEEEEEEECSSC
T ss_pred cEEEEEECCCCCEEEEEcCC---------------------------------CeEEEEEcCC----Ccceeeeeecccc
Confidence 45678999999999998875 3678999853 221 11111112
Q ss_pred CCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCcee---ecccCCCccccccccceEEecCCeEEEEEecC
Q 002209 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (953)
Q Consensus 188 ~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 264 (953)
...+...+|||||++|+.... ...+.+++...+... .+..+.. .+..++|+|||+.|+...
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~---------D~~v~iw~~~~~~~~~~~~~~~h~~-----~v~~v~~sp~~~~l~s~s-- 124 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASF---------DATTCIWKKNQDDFECVTTLEGHEN-----EVKSVAWAPSGNLLATCS-- 124 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEET---------TSCEEEEEECCC-EEEEEEECCCSS-----CEEEEEECTTSSEEEEEE--
T ss_pred CCcEEEEEECCCCCEEEEEEC---------CCcEEEEEccCCCeEEEEEccCCCC-----CceEEEEeCCCCEEEEEE--
Confidence 246889999999999988652 344555565555432 2222222 277899999999998761
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc----eeEeCCC-Ccccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP-AVYTSLD 338 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~----~~~l~~~-~~~~~~~ 338 (953)
..+.|.++++ ++. ...+... ..+..++
T Consensus 125 -----------------------------------------------~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 125 -----------------------------------------------RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp -----------------------------------------------TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred -----------------------------------------------CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 1234556666 432 2233333 6788899
Q ss_pred cCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002209 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 339 ~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
|+|||+.|+..+.+. .|.+|+...+....+.... +....+..++|+|||+.|+..
T Consensus 158 ~~p~~~~l~s~s~d~-------------~i~~w~~~~~~~~~~~~~~----------~h~~~v~~l~~sp~g~~l~s~-- 212 (345)
T 3fm0_A 158 WHPSQELLASASYDD-------------TVKLYREEEDDWVCCATLE----------GHESTVWSLAFDPSGQRLASC-- 212 (345)
T ss_dssp ECSSSSCEEEEETTS-------------CEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECTTSSEEEEE--
T ss_pred ECCCCCEEEEEeCCC-------------cEEEEEecCCCEEEEEEec----------CCCCceEEEEECCCCCEEEEE--
Confidence 999999999887443 8999999866533222211 112345689999999877655
Q ss_pred eccCCCcccccccCCeEEEEecCCCCCCCc------------eEE---ee-cccccCCeeeccCCceEEEEEecccCceE
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGP------------EIL---HK-LDLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~------------~~l---~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
+....|.+|+. ...+.. ..+ .. +...+..++|+|++..|+.++.++. .+
T Consensus 213 -----------s~D~~v~iW~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~--i~ 277 (345)
T 3fm0_A 213 -----------SDDRTVRIWRQ--YLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA--IR 277 (345)
T ss_dssp -----------ETTSCEEEEEE--ECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC--EE
T ss_pred -----------eCCCeEEEecc--ccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe--EE
Confidence 34456777763 111111 111 11 3344667899999999988776543 47
Q ss_pred EEEEcCCCCCCCcEE-e----ecCCCccccCCCCCCCeEeccCCC-EEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEE
Q 002209 483 TWVISPGSKDVAPRI-L----FDRSSEDVYSDPGSPMMRRTSTGT-YVIAKIKKENDEGTYILLNGNGATPEGNIPFLDL 556 (953)
Q Consensus 483 l~~~d~~~~~~~~~~-~----~~~~~~~~~~~~~~p~~~~SpDG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 556 (953)
+|.++.......+.. + .......+.. ++|+|++. .|+....+. .+.+
T Consensus 278 vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~------v~~~p~~~~~laS~s~Dg---------------------~v~~ 330 (345)
T 3fm0_A 278 VFQEDPNSDPQQPTFSLTAHLHQAHSQDVNC------VAWNPKEPGLLASCSDDG---------------------EVAF 330 (345)
T ss_dssp EEEECTTSCTTSCCEEEEEEETTSSSSCEEE------EEECSSSTTEEEEEETTS---------------------CEEE
T ss_pred EEEeCCCCCcceeeEEEEeeecccccCcEeE------eEEeCCCceEEEEcCCCC---------------------cEEE
Confidence 887765432112111 1 1222333333 78999985 666554221 3888
Q ss_pred EECCCCc
Q 002209 557 FDINTGS 563 (953)
Q Consensus 557 ~d~~~~~ 563 (953)
|++.+++
T Consensus 331 W~~~~~~ 337 (345)
T 3fm0_A 331 WKYQRPE 337 (345)
T ss_dssp EEECC--
T ss_pred EEecCCC
Confidence 9887655
No 129
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=1.3e-14 Score=160.02 Aligned_cols=275 Identities=9% Similarity=-0.036 Sum_probs=174.9
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
...++|||||++|++..... ........|+++|+++++.......+.. ...++|+|||+.++++..
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~--~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~------- 108 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQS--RKLDKGGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNT------- 108 (353)
T ss_dssp EEEEEEETTTTEEEEEECCC--TTTEESEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEET-------
T ss_pred ccceEECCCCCEEEEEcCCC--cCCCCCccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEec-------
Confidence 45689999999997765311 0001256899999999886655443322 458899999998887610
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-C---------cccccc
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-A---------VYTSLD 338 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~---------~~~~~~ 338 (953)
....|+++|+ +|+. ..+..+ . ....++
T Consensus 109 -----------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 109 -----------------------------------------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp -----------------------------------------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred -----------------------------------------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 2246888888 7754 333322 1 146689
Q ss_pred cCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002209 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 339 ~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
|||||++|++..... ...|++||+++++......... ..+..++|+|||+.+++.
T Consensus 148 ~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~s~dg~~l~~~-- 202 (353)
T 3vgz_A 148 ADDATNTVYISGIGK-----------ESVIWVVDGGNIKLKTAIQNTG------------KMSTGLALDSEGKRLYTT-- 202 (353)
T ss_dssp EETTTTEEEEEEESS-----------SCEEEEEETTTTEEEEEECCCC------------TTCCCCEEETTTTEEEEE--
T ss_pred ECCCCCEEEEEecCC-----------CceEEEEcCCCCceEEEecCCC------------CccceEEECCCCCEEEEE--
Confidence 999999988776321 2379999998665543322111 123578999999977665
Q ss_pred eccCCCcccccccCCeEEEEecCCCCCCCce-EEee----cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCC
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-ILHK----LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~-~l~~----~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (953)
...+.++++|+ ..++.. .+.. .......++|+|||++|++..... ..|+++|+.++
T Consensus 203 -----------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---~~v~~~d~~~~-- 263 (353)
T 3vgz_A 203 -----------NADGELITIDT---ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---AEVLVVDTRNG-- 263 (353)
T ss_dssp -----------CTTSEEEEEET---TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS---SEEEEEETTTC--
T ss_pred -----------cCCCeEEEEEC---CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC---CEEEEEECCCC--
Confidence 33567889995 334332 2222 122234589999999987765332 37999998875
Q ss_pred CcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcc
Q 002209 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (953)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~ 573 (953)
+......... . ..+.|+|||++++..... ...|++||+.+++..........
T Consensus 264 ~~~~~~~~~~--~------~~~~~s~dg~~l~v~~~~--------------------~~~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 264 NILAKVAAPE--S------LAVLFNPARNEAYVTHRQ--------------------AGKVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp CEEEEEECSS--C------CCEEEETTTTEEEEEETT--------------------TTEEEEEETTTTEEEEEEECCSE
T ss_pred cEEEEEEcCC--C------ceEEECCCCCEEEEEECC--------------------CCeEEEEECCCCeEEEEEecCCC
Confidence 2222222111 1 117899999987766421 13599999998887665544321
Q ss_pred cceeeeEeeccCCccccccccCCEEEEEEec
Q 002209 574 KYYETTVALMSDQTEGDLYLNQLKILTSKES 604 (953)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 604 (953)
.. ..+|++||+.+++....
T Consensus 316 -----~~-------~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 -----PN-------SLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----EE-------EEEECTTSCEEEEEEEC
T ss_pred -----CC-------eEEEcCCCCEEEEEEcc
Confidence 11 24689999988887766
No 130
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.70 E-value=3.4e-17 Score=173.91 Aligned_cols=226 Identities=13% Similarity=0.077 Sum_probs=144.1
Q ss_pred CCceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHH-HHcC-
Q 002209 636 SLQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW-LARG- 712 (953)
Q Consensus 636 ~~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~G- 712 (953)
....+.+++.+. .|..+..++|+|+++++.+ ++|+|+++||++... . ...+ ......+ ++.|
T Consensus 15 ~~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~~~~~-----~-------~~~~-~~~~~~~~~~~g~ 79 (275)
T 2qm0_A 15 TSNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGNAFFQ-----T-------FHEA-VKIQSVRAEKTGV 79 (275)
T ss_dssp CTTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHHHHHH-----H-------HHHH-HHHHGGGHHHHCC
T ss_pred cCCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecChHHHH-----H-------HHHH-HHHHhhcchhcCC
Confidence 345788889886 6889999999999987654 599999999963110 0 0000 0011112 3467
Q ss_pred --cEEEEcCCCCCCCCCC---h--hhh-----------------hhhHHHHHHHH--HHHHHHHHHcCCCCCCcEEEEEe
Q 002209 713 --FAILGGPTTPIIGEGD---E--EAN-----------------DRFVEQLVACA--EAAVEEVVRRGVAHPSKIAVGGH 766 (953)
Q Consensus 713 --~~V~~~~~~~~~G~G~---~--~~~-----------------~~~~~~~~~D~--~~~~~~l~~~~~~d~~~i~l~G~ 766 (953)
++|+.+++.+...++. . ..+ .......+.+. .+.+.++.++..+|+++++|+||
T Consensus 80 ~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~ 159 (275)
T 2qm0_A 80 SPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGH 159 (275)
T ss_dssp CCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEE
T ss_pred CCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEe
Confidence 9999877654211110 0 000 00000111221 13455666666688899999999
Q ss_pred ChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCC
Q 002209 767 SYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGT 846 (953)
Q Consensus 767 S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~ 846 (953)
||||++++.++.++|+.|+++++.+|.+.+.. . ......+.+.... .......|++++||+.|..++
T Consensus 160 S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~~-------~--~~~~~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~- 226 (275)
T 2qm0_A 160 XLGGLFALHILFTNLNAFQNYFISSPSIWWNN-------K--SVLEKEENLIIEL---NNAKFETGVFLTVGSLEREHM- 226 (275)
T ss_dssp THHHHHHHHHHHHCGGGCSEEEEESCCTTHHH-------H--GGGGGTTHHHHHH---HTCSSCEEEEEEEETTSCHHH-
T ss_pred cchhHHHHHHHHhCchhhceeEEeCceeeeCh-------H--HHHHHHHHHHhhh---cccCCCceEEEEeCCcccchh-
Confidence 99999999999999999999999998753110 0 0000011111100 023456799999999999877
Q ss_pred chHHHHHHHHHH---HhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 847 LTMQSDRFFNAL---KGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 847 ~~~~~~~~~~~l---~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
..++++++++| +..|+++++.++|+++|+.. ....+...++||
T Consensus 227 -~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 227 -VVGANELSERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp -HHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 89999999999 56788999999999999642 223334455554
No 131
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.70 E-value=5.6e-16 Score=167.70 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=144.3
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
..+.+++.. +|..+....+.+..- ++..|+||++||..... .. .......|+++||.|+.
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~p~vv~~hG~~~~~-----------~~----~~~~~~~l~~~g~~v~~ 78 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAPK----KANGRTILLMHGKNFCA-----------GT----WERTIDVLADAGYRVIA 78 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECCS----SCCSCEEEEECCTTCCG-----------GG----GHHHHHHHHHTTCEEEE
T ss_pred cceeEEEec-CCCCeeEEEeecCCC----CCCCCeEEEEcCCCCcc-----------hH----HHHHHHHHHHCCCeEEE
Confidence 466777765 666666555544321 23478999999964211 11 12445678889999999
Q ss_pred cCCCCCCCCCChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCC
Q 002209 718 GPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (953)
+|. +|+|.+.... ........|+.++++.+ +.+++.|+|||+||.+++.++.++|++++++|+++|..
T Consensus 79 ~d~---~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 79 VDQ---VGFCKSSKPAHYQYSFQQLAANTHALLERL------GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp ECC---TTSTTSCCCSSCCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred eec---CCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 554 6777664432 23445555555554442 34689999999999999999999999999999999864
Q ss_pred CCCCCCcCccc-----------------------------ccch---hhh---------------------hHHHHHhcC
Q 002209 795 NRTLTPFGFQN-----------------------------EDRT---LWE---------------------ATSTYVEMS 821 (953)
Q Consensus 795 d~~~~~~~~~~-----------------------------~~~~---~~~---------------------~~~~~~~~s 821 (953)
........... .... .|. ........+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (315)
T 4f0j_A 150 LEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQP 229 (315)
T ss_dssp SSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCC
T ss_pred cCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccch
Confidence 21100000000 0000 000 001112233
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCCchHHH------------HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHH
Q 002209 822 PFMSANKLKKPILLVHGEEDNNSGTLTMQS------------DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (953)
Q Consensus 822 p~~~~~~i~~P~Li~~G~~D~~v~~~~~~~------------~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 889 (953)
....+.++++|+|+++|++|..+| ..+. .+..+.+......+++++++++||... .++...+.+.
T Consensus 230 ~~~~l~~~~~P~lii~G~~D~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~~ 306 (315)
T 4f0j_A 230 VVYELDRLQMPTLLLIGEKDNTAI--GKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQ-IQAPERFHQA 306 (315)
T ss_dssp CGGGGGGCCSCEEEEEETTCCCCT--TGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHH-HHSHHHHHHH
T ss_pred hhhhcccCCCCeEEEEecCCCcCc--cccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchh-hhCHHHHHHH
Confidence 445678899999999999999987 5544 445555555555689999999999863 4566777778
Q ss_pred HHHHHHH
Q 002209 890 TDRWLQK 896 (953)
Q Consensus 890 i~~fl~~ 896 (953)
+.+||++
T Consensus 307 i~~fl~~ 313 (315)
T 4f0j_A 307 LLEGLQT 313 (315)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 8888754
No 132
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.70 E-value=7e-17 Score=186.30 Aligned_cols=248 Identities=13% Similarity=0.137 Sum_probs=160.1
Q ss_pred CceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcc------cCC--CCCCCCccchHHHHH
Q 002209 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQV------RGS--PNEFPRIGSTSVLLW 708 (953)
Q Consensus 637 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~l 708 (953)
+..+.+.++..||.+|.+.+|+|++ .+++|+||+.||...........+ .+. ...+..+....++.|
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 113 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFW 113 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHH
T ss_pred EEEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHH
Confidence 3467899999999999999999985 246999999997421110000000 000 000100101125689
Q ss_pred HHcCcEEEEcCCCCCCCCCChhhhh-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEE
Q 002209 709 LARGFAILGGPTTPIIGEGDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (953)
Q Consensus 709 a~~G~~V~~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (953)
+++||+|+.+|++ |.|.+.+.. .+......|+.++++||.+++++| .||+++|+||||++++.+|+..|+.++|+
T Consensus 114 a~~Gy~vv~~D~R---G~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ai 189 (560)
T 3iii_A 114 VPNDYVVVKVALR---GSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAM 189 (560)
T ss_dssp GGGTCEEEEEECT---TSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEE
T ss_pred HhCCCEEEEEcCC---CCCCCCCccccCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEE
Confidence 9999999996554 555554322 334578999999999999988887 89999999999999999999998999999
Q ss_pred EEcccCCCCCC---CCcCccccc-chhh------------------hh-------HHHHHhcCcccccCCCCCcEEEEEe
Q 002209 788 IARSGAYNRTL---TPFGFQNED-RTLW------------------EA-------TSTYVEMSPFMSANKLKKPILLVHG 838 (953)
Q Consensus 788 v~~~~~~d~~~---~~~~~~~~~-~~~~------------------~~-------~~~~~~~sp~~~~~~i~~P~Li~~G 838 (953)
|+.+|+.|... ..-+..... ...| .. .+.+...++ .+++|++|+|+++|
T Consensus 190 v~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I~vPvl~v~G 267 (560)
T 3iii_A 190 IPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQIKTPLLTCAS 267 (560)
T ss_dssp EEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGCCSCEEEEEE
T ss_pred EecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhCCCCEEEeCC
Confidence 99999877321 000000000 0011 00 012222333 57889999999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccCCC
Q 002209 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (953)
..|..+. ...+.+.|++++..+ +.+++.++ +|+. ........+.+++||++||+..+
T Consensus 268 w~D~~~~--~~g~l~~y~~l~~~~--k~l~ih~~-~~~~--~~~~~~~~~~~~~wfD~~LkG~~ 324 (560)
T 3iii_A 268 WSTQGLH--NRGSFEGFKQAASEE--KWLYVHGR-KEWE--SYYARENLERQKSFFDFYLKEEN 324 (560)
T ss_dssp GGGTTTT--HHHHHHHHHHCCCSS--EEEEEESS-CHHH--HHHSHHHHHHHHHHHHHHTSCCC
T ss_pred cCCCccc--chhHHHHHHhccccC--cEEEECCC-CCcC--cccChhHHHHHHHHHHHHhCCCC
Confidence 9997555 667778888776543 34444332 3321 00012456788999999998654
No 133
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.70 E-value=9.9e-16 Score=164.94 Aligned_cols=227 Identities=11% Similarity=0.049 Sum_probs=141.9
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEc
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (953)
.+...+...+|.+++++.+.|.+..+ .+.|+||++||.... .......+..|+++||.|+++
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~~~---~~~~~VvllHG~g~~---------------~~~~~~~~~~L~~~G~~Vi~~ 68 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKENVP---FKNNTILIASGFARR---------------MDHFAGLAEYLSTNGFHVFRY 68 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSC---CCSCEEEEECTTCGG---------------GGGGHHHHHHHHTTTCCEEEE
T ss_pred ceEEEEEcCCCCEEEEEEecCcccCC---CCCCEEEEecCCccC---------------chHHHHHHHHHHHCCCEEEEe
Confidence 34556778899999999988753111 136889999995211 011123456778899999995
Q ss_pred CCCCCCCC-CChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC
Q 002209 719 PTTPIIGE-GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (953)
Q Consensus 719 ~~~~~~G~-G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d 795 (953)
|. +|+ |.+.... ........|+.++++++.+.+ .++++|+||||||.+++.++.+ | +++++|+.++..+
T Consensus 69 D~---rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~ 140 (305)
T 1tht_A 69 DS---LHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVN 140 (305)
T ss_dssp CC---CBCC--------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSC
T ss_pred eC---CCCCCCCCCcccceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchh
Confidence 54 565 6664321 124567889999999997543 4689999999999999999988 6 7999998877543
Q ss_pred CCC-----CCcCc--------ccc----cch--hhhhHHHHHhc------CcccccCCCCCcEEEEEeCCCCCCCCchHH
Q 002209 796 RTL-----TPFGF--------QNE----DRT--LWEATSTYVEM------SPFMSANKLKKPILLVHGEEDNNSGTLTMQ 850 (953)
Q Consensus 796 ~~~-----~~~~~--------~~~----~~~--~~~~~~~~~~~------sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~ 850 (953)
... ....+ ... ... ........... +....+.++++|+|++||++|..+| +..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp--~~~ 218 (305)
T 1tht_A 141 LRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEE 218 (305)
T ss_dssp HHHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HHH
T ss_pred HHHHHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccC--HHH
Confidence 100 00000 000 000 00000011111 1223567899999999999999998 888
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH---HHHHHHHHHHHHHh
Q 002209 851 SDRFFNALKGHGALCRLVILPFESHGYAARESI---MHVLWETDRWLQKY 897 (953)
Q Consensus 851 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~---~~~~~~i~~fl~~~ 897 (953)
+.++++.+.. ..++++++|++||.+. +.. ..+++.+.+|....
T Consensus 219 ~~~l~~~i~~--~~~~l~~i~~agH~~~--e~p~~~~~fl~~~~~~~~~~ 264 (305)
T 1tht_A 219 VYDMLAHIRT--GHCKLYSLLGSSHDLG--ENLVVLRNFYQSVTKAAIAM 264 (305)
T ss_dssp HHHHHTTCTT--CCEEEEEETTCCSCTT--SSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--CCcEEEEeCCCCCchh--hCchHHHHHHHHHHHHHHHh
Confidence 8877765532 2479999999999874 332 23444555554443
No 134
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.69 E-value=5.2e-15 Score=162.62 Aligned_cols=264 Identities=10% Similarity=0.067 Sum_probs=171.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+..+.+ +.|.|||+.+ + .....+.. ...
T Consensus 57 ~v~~~~~s~d~~~l~s~s~D---------------------------------g~v~iWd~~~-~--~~~~~~~~--~~~ 98 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQD---------------------------------GKLIIWDSYT-T--NKVHAIPL--RSS 98 (340)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------TEEEEEETTT-C--CEEEEEEC--SSS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CcEEEEECCC-C--CcceEeec--CCc
Confidence 56788999999999988875 3679999843 2 22233332 223
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce-----eecccCCCccccccccceEEecCCeEEEEEecC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-----RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 264 (953)
.+....|+|||+.|+... ....+.++++.+++. ..+..+.. .+..+.|+++++.+..+
T Consensus 99 ~v~~~~~s~~~~~l~s~~---------~d~~v~iw~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~l~s~s--- 161 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGG---------LDNICSIYNLKTREGNVRVSRELAGHTG-----YLSCCRFLDDNQIVTSS--- 161 (340)
T ss_dssp CEEEEEECTTSSEEEEEE---------TTCEEEEEETTTCSBSCEEEEEEECCSS-----CEEEEEEEETTEEEEEE---
T ss_pred cEEEEEECCCCCEEEEEe---------CCCeEEEEECccCCCcceeEEEecCCCc-----cEEEEEECCCCcEEEEE---
Confidence 688899999999988754 245777788776531 12222222 26678899999744322
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-CcccccccCC
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSP 341 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~Sp 341 (953)
..+.|.++|+ +++.. .+... ..+..++|+|
T Consensus 162 -----------------------------------------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 162 -----------------------------------------------GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp -----------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred -----------------------------------------------CCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 2245777888 77543 34444 7788999999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~ 420 (953)
||+.|+..+.+. .|.+||+..+. ...+..+. ..+..++|+|||+.++..
T Consensus 195 ~~~~l~sg~~d~-------------~v~~wd~~~~~~~~~~~~h~-------------~~v~~v~~~p~~~~l~s~---- 244 (340)
T 1got_B 195 DTRLFVSGACDA-------------SAKLWDVREGMCRQTFTGHE-------------SDINAICFFPNGNAFATG---- 244 (340)
T ss_dssp TSSEEEEEETTS-------------CEEEEETTTCSEEEEECCCS-------------SCEEEEEECTTSSEEEEE----
T ss_pred CCCEEEEEeCCC-------------cEEEEECCCCeeEEEEcCCc-------------CCEEEEEEcCCCCEEEEE----
Confidence 999888777443 89999997544 33333322 335679999999876655
Q ss_pred cCCCcccccccCCeEEEEecCCCCCCCceEEeecc---cccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEE
Q 002209 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (953)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~---~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (953)
+..+.+.+||+ ..++........ ..+..++|+|||+.|+....++ .+.++|..++ +...
T Consensus 245 ---------s~d~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~----~i~vwd~~~~--~~~~ 306 (340)
T 1got_B 245 ---------SDDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF----NCNVWDALKA--DRAG 306 (340)
T ss_dssp ---------ETTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC--CEEE
T ss_pred ---------cCCCcEEEEEC---CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC----eEEEEEcccC--cEee
Confidence 44567899996 333222211222 2456789999999988876543 4666666654 2333
Q ss_pred eecCCCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 498 LFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 498 ~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
........+.. +.|+|||++|+....
T Consensus 307 ~~~~h~~~v~~------~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 307 VLAGHDNRVSC------LGVTDDGMAVATGSW 332 (340)
T ss_dssp EEECCSSCEEE------EEECTTSSCEEEEET
T ss_pred EeecCCCcEEE------EEEcCCCCEEEEEcC
Confidence 33333333333 789999999988763
No 135
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.69 E-value=1.2e-14 Score=158.94 Aligned_cols=279 Identities=14% Similarity=0.118 Sum_probs=179.3
Q ss_pred CCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceee-cccCCCccccccccceEEecCCeEEEEEecC
Q 002209 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP-LFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (953)
Q Consensus 186 ~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 264 (953)
.+...+....|+|||+.|+... ...|.++++++++... +...........+..++|+|||+.|++..
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-- 116 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG----------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-- 116 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC----------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE--
T ss_pred cCCCceEEEEEecCCcEEEEcC----------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc--
Confidence 3445789999999999998843 4578888887764322 21100000112277899999999888761
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc---eeEeCCC-Cccccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDP 339 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~ 339 (953)
..+.|.++++ +++ ...+... ..+..++|
T Consensus 117 -----------------------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 117 -----------------------------------------------EASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149 (337)
T ss_dssp -----------------------------------------------SSSEEEEEECCCC--EEEEEEECSSSCEEEEEE
T ss_pred -----------------------------------------------CCCcEEEEECCCCCcceeeecccCCCceEEEEE
Confidence 2246777787 554 2233333 66788999
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
+|||+.|+....+ +.|.+||+.+++.. .+..+. ..+..+.|+|||+.++..
T Consensus 150 ~~~~~~l~~~~~d-------------g~v~~~d~~~~~~~~~~~~~~-------------~~i~~~~~~~~~~~l~~~-- 201 (337)
T 1gxr_A 150 SPDSKVCFSCCSD-------------GNIAVWDLHNQTLVRQFQGHT-------------DGASCIDISNDGTKLWTG-- 201 (337)
T ss_dssp CTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTSSEEEEE--
T ss_pred CCCCCEEEEEeCC-------------CcEEEEeCCCCceeeeeeccc-------------CceEEEEECCCCCEEEEE--
Confidence 9999999988743 38999999865543 333221 234679999999877665
Q ss_pred eccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
+..+.+++||+ ..++..........+..+.|+|||+.|++....+ .++++++.++ +...+
T Consensus 202 -----------~~dg~i~~~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~----~i~~~~~~~~--~~~~~ 261 (337)
T 1gxr_A 202 -----------GLDNTVRSWDL---REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS----NVEVLHVNKP--DKYQL 261 (337)
T ss_dssp -----------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEECTTSSEEEEEETTS----CEEEEETTSS--CEEEE
T ss_pred -----------ecCCcEEEEEC---CCCceEeeecCCCceEEEEECCCCCEEEEEcCCC----cEEEEECCCC--CeEEE
Confidence 44568999996 4444433444556677899999999998876443 4666777664 22222
Q ss_pred ecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~ 578 (953)
......+.. +.|+|||++|+....+ ..+++||+.+++..........
T Consensus 262 -~~~~~~v~~------~~~~~~~~~l~~~~~d---------------------g~i~~~~~~~~~~~~~~~~~~~----- 308 (337)
T 1gxr_A 262 -HLHESCVLS------LKFAYCGKWFVSTGKD---------------------NLLNAWRTPYGASIFQSKESSS----- 308 (337)
T ss_dssp -CCCSSCEEE------EEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECSSC-----
T ss_pred -cCCccceeE------EEECCCCCEEEEecCC---------------------CcEEEEECCCCeEEEEecCCCc-----
Confidence 222222222 7899999998876632 2499999998877644333321
Q ss_pred eEeeccCCccccccccCCEEEEEEecCCCCceEEEEE
Q 002209 579 TVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQS 615 (953)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~ 615 (953)
+. ...|++|++.++..... ..+++++
T Consensus 309 v~-------~~~~s~~~~~l~~~~~d----g~i~iw~ 334 (337)
T 1gxr_A 309 VL-------SCDISVDDKYIVTGSGD----KKATVYE 334 (337)
T ss_dssp EE-------EEEECTTSCEEEEEETT----SCEEEEE
T ss_pred EE-------EEEECCCCCEEEEecCC----CeEEEEE
Confidence 11 24688999877654433 2355554
No 136
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2.1e-15 Score=170.56 Aligned_cols=290 Identities=10% Similarity=0.125 Sum_probs=168.2
Q ss_pred CCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCC
Q 002209 108 APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD 187 (953)
Q Consensus 108 ~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~ 187 (953)
.+.+..++|||||+.++++... .+......+.++.|+||++.... ..+.+..+..
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~----------------------~g~~~~~~~~d~~v~iw~~~~~~---~~~~~~~~~~ 66 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTV----------------------SGTVDANFSTDSSLELWSLLAAD---SEKPIASLQV 66 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCB----------------------SSCCCSSCCCCCCCEEEESSSGG---GCSCSCCCCC
T ss_pred hhhcceEeeCCCCCCEEEEEec----------------------CcccccccCCCCeEEEEEccCCC---CCcEEEEEec
Confidence 3467789999999844444421 01001111122468999985411 1112222333
Q ss_pred CCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCC----C-ceeecccCCCccccccccceEEecC-CeEEEEE
Q 002209 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT----G-KARPLFQSPDIYLNAIFDNFVWVNN-STLLVCT 261 (953)
Q Consensus 188 ~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~----g-~~~~lt~~~~~~~~~~~~~~~wspD-g~~l~~~ 261 (953)
...+..+.|+|||+.|+.... ...|.++++.+ . ....+..+.. .+..++|+|| ++.|+..
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~---------dg~v~vw~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALD---------NGSLELYSTNEANNAINSMARFSNHSS-----SVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEES---------SSCEEEECCSSTTSCCCEEEECCCSSS-----CCCEEEECSSSTTBEEEE
T ss_pred CCceEEEEECCCCCeEEEEcc---------CCeEEEeecccccccccchhhccCCcc-----ceEEEEEcCCCCCEEEEE
Confidence 457899999999999988552 45677777766 2 2333433322 2778999999 7777755
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-------eeEe---CC
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-------VKEI---GP 330 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-------~~~l---~~ 330 (953)
. ..+.|.++|+ +++ ...+ ..
T Consensus 133 ~-------------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 133 G-------------------------------------------------NNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp C-------------------------------------------------SSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred c-------------------------------------------------CCCeEEEEECCCCccccccccccccccccC
Confidence 1 1234566666 443 1111 12
Q ss_pred C-CcccccccCCC-CcEEEEEEecCCccccccCCCCCcceEEEeccCceEEE-eccCCCcccCCccccccccCccceeec
Q 002209 331 P-AVYTSLDPSPD-EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWR 407 (953)
Q Consensus 331 ~-~~~~~~~~SpD-G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~ws 407 (953)
. ..+..++|+|| ++.|+....+ +.|.+||+..+.... +...... .+....+..++|+
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSS-------------NFASIWDLKAKKEVIHLSYTSPN-------SGIKQQLSVVEWH 223 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSS-------------SCEEEEETTTTEEEEEECCCCCS-------SCCCCCEEEEEEC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCC-------------CCEEEEECCCCCcceEEeccccc-------cccCCceEEEEEC
Confidence 2 67788999999 5555554422 389999998655433 3321100 0011345679999
Q ss_pred cCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEe-ecccccCCeeecc-CCceEEEEEecccCceEEE
Q 002209 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILH-KLDLRYGGISWCD-DSLALVYESWYKTRRTRTW 484 (953)
Q Consensus 408 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~-~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~ 484 (953)
|||+.+++..... .....|.+||+ .++... ..+. .+...+..+.|+| |++.|+....++ .|.
T Consensus 224 ~~~~~~l~~~~~d---------~~~~~i~~~d~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg----~v~ 288 (416)
T 2pm9_A 224 PKNSTRVATATGS---------DNDPSILIWDL--RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN----TVL 288 (416)
T ss_dssp SSCTTEEEEEECC---------SSSCCCCEEET--TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS----EEE
T ss_pred CCCCCEEEEEECC---------CCCceEEEEeC--CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC----CEE
Confidence 9997655552110 01127888886 222232 3344 4666778899999 888888776543 577
Q ss_pred EEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCC-CEEEEEe
Q 002209 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTG-TYVIAKI 528 (953)
Q Consensus 485 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG-~~l~~~~ 528 (953)
++++.++ +...........+.. +.|+||| +.|+...
T Consensus 289 ~wd~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 289 LWNPESA--EQLSQFPARGNWCFK------TKFAPEAPDLFACAS 325 (416)
T ss_dssp EECSSSC--CEEEEEECSSSCCCC------EEECTTCTTEEEECC
T ss_pred EeeCCCC--ccceeecCCCCceEE------EEECCCCCCEEEEEe
Confidence 7777764 333333333333333 8899999 6666554
No 137
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.68 E-value=8.8e-15 Score=164.07 Aligned_cols=241 Identities=12% Similarity=0.076 Sum_probs=162.6
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCc
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~ 190 (953)
+..++|||||++|+++... + +.|++||+.+ ++.... +..+..
T Consensus 34 ~~~~~~s~dg~~l~~~~~~------------------------d--------~~i~v~d~~~----~~~~~~--~~~~~~ 75 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAH------------------------S--------NDVSIIDTAT----NNVIAT--VPAGSS 75 (391)
T ss_dssp EEEEEECTTSSEEEEEEGG------------------------G--------TEEEEEETTT----TEEEEE--EECSSS
T ss_pred cceEEECCCCCEEEEECCC------------------------C--------CeEEEEECCC----CeEEEE--EECCCC
Confidence 4578999999998776532 0 2689999843 332222 222336
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
+..+.|||||++|++... ....|+++|+++++.......... +..++|+|||+.|+++..
T Consensus 76 v~~~~~spdg~~l~~~~~--------~~~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~------- 135 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNM--------ASSTLSVIDTTSNTVAGTVKTGKS-----PLGLALSPDGKKLYVTNN------- 135 (391)
T ss_dssp EEEEEECTTSSEEEEEET--------TTTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEET-------
T ss_pred ccceEECCCCCEEEEEEC--------CCCEEEEEECCCCeEEEEEeCCCC-----cceEEECCCCCEEEEEeC-------
Confidence 888999999999988642 246899999999887665544332 568999999998876610
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCC-CCcccccccCCCCcEEEE
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-PAVYTSLDPSPDEKYILI 348 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~-~~~~~~~~~SpDG~~l~~ 348 (953)
....|+++|+ +++...... ...+..++|+|||++|++
T Consensus 136 -----------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 136 -----------------------------------------GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp -----------------------------------------TTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEE
T ss_pred -----------------------------------------CCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEE
Confidence 2356888898 776544433 356678999999999977
Q ss_pred EEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002209 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (953)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (953)
+... .+.|++||+.++......... ..+..++|+|||+.++.....
T Consensus 175 ~~~~------------~~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~--------- 220 (391)
T 1l0q_A 175 ANFD------------SMSISVIDTVTNSVIDTVKVE-------------AAPSGIAVNPEGTKAYVTNVD--------- 220 (391)
T ss_dssp EETT------------TTEEEEEETTTTEEEEEEECS-------------SEEEEEEECTTSSEEEEEEEC---------
T ss_pred EeCC------------CCEEEEEECCCCeEEEEEecC-------------CCccceEECCCCCEEEEEecC---------
Confidence 6522 247999999876654433221 223578999999977666210
Q ss_pred cccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 429 VTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 429 ~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
...+.+++||+ ..++.............+.|+|||++|+++...+ + .++++|+.++
T Consensus 221 -~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d-~--~v~v~d~~~~ 276 (391)
T 1l0q_A 221 -KYFNTVSMIDT---GTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX-N--TVSVIDTATN 276 (391)
T ss_dssp -SSCCEEEEEET---TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT-T--EEEEEETTTT
T ss_pred -cCCCcEEEEEC---CCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC-C--EEEEEECCCC
Confidence 13568999996 4443333333333456789999999987775443 2 6788888775
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=2.7e-14 Score=155.99 Aligned_cols=275 Identities=9% Similarity=-0.025 Sum_probs=165.5
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce-eecccCCCccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDIYL 242 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~~ 242 (953)
.|.+||+.+ ++........ .... .++|||||++|+++.. +...|+++|+++++. .........
T Consensus 21 ~v~~~d~~~----~~~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~-- 84 (331)
T 3u4y_A 21 RISFFSTDT----LEILNQITLG-YDFV-DTAITSDCSNVVVTSD--------FCQTLVQIETQLEPPKVVAIQEGQS-- 84 (331)
T ss_dssp EEEEEETTT----CCEEEEEECC-CCEE-EEEECSSSCEEEEEES--------TTCEEEEEECSSSSCEEEEEEECSS--
T ss_pred eEEEEeCcc----cceeeeEEcc-CCcc-eEEEcCCCCEEEEEeC--------CCCeEEEEECCCCceeEEecccCCC--
Confidence 679999853 3322222122 2345 8999999998887653 245999999998875 332222221
Q ss_pred cccccc-eEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc
Q 002209 243 NAIFDN-FVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (953)
Q Consensus 243 ~~~~~~-~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 321 (953)
... ++|+|||+.|+.. . ..+ +...|+++|+
T Consensus 85 ---~~~~~~~s~dg~~l~~~-~--------------------------------------~~~-------~~~~i~v~d~ 115 (331)
T 3u4y_A 85 ---SMADVDITPDDQFAVTV-T--------------------------------------GLN-------HPFNMQSYSF 115 (331)
T ss_dssp ---CCCCEEECTTSSEEEEC-C--------------------------------------CSS-------SSCEEEEEET
T ss_pred ---CccceEECCCCCEEEEe-c--------------------------------------CCC-------CcccEEEEEC
Confidence 335 8999999999833 0 000 1127889998
Q ss_pred -CCceeEeC-CCCcccccccCCCCcEEEEEEecCCccccccCCCCCcc-eEEEeccCc-eEEEeccCCCcccCCcccccc
Q 002209 322 -DGTVKEIG-PPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQ-VGVWTTDGI-FVRELCDLPLAEDIPIAFNSV 397 (953)
Q Consensus 322 -~g~~~~l~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~-i~~~d~~g~-~~~~l~~~~~~~~~p~~~~~~ 397 (953)
+++..... .......++|||||++|+++.... .. +++|+++.. .......... ..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~~---------~~ 174 (331)
T 3u4y_A 116 LKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEFI---------SG 174 (331)
T ss_dssp TTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEEE---------CS
T ss_pred CCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCccc---------cC
Confidence 77654433 335567899999999988776331 25 888888732 2211110000 00
Q ss_pred ccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc---eEEeecccccCCeeeccCCceEEEEE
Q 002209 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYES 474 (953)
Q Consensus 398 ~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~---~~l~~~~~~~~~~~~SpDg~~l~~~~ 474 (953)
..++..++|+|||+.+++.. ...+.++++|+ ..++. ............++|||||++|+++.
T Consensus 175 ~~~~~~~~~spdg~~l~v~~------------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVAN------------LIGNSIGILET---QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEE------------TTTTEEEEEEC---SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEEC
T ss_pred CCCccceEECCCCCEEEEEe------------CCCCeEEEEEC---CCCcccceeeeccCCCCCceEEECCCCCEEEEEE
Confidence 12346799999999766551 22457899996 44443 22223345567899999999987765
Q ss_pred ecccCceEEEEEcCCCCCCCcEEee--cCC----CccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCC
Q 002209 475 WYKTRRTRTWVISPGSKDVAPRILF--DRS----SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPE 548 (953)
Q Consensus 475 ~~~~~~~~l~~~d~~~~~~~~~~~~--~~~----~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~ 548 (953)
..+ ..|+++|+.++ +...+. ... ....+ ....+.|||||++|++...+
T Consensus 240 ~~~---~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~v~~~~------------------ 293 (331)
T 3u4y_A 240 EST---VDVFNFNQLSG--TLSFVKSFGHGLLIDPRPLF---GANQMALNKTETKLFISANI------------------ 293 (331)
T ss_dssp SSE---EEEEEEETTTT--EEEEEEEEECCCCCCCGGGT---TCCCEEECTTSSEEEEEETT------------------
T ss_pred cCC---CEEEEEECCCC--ceeeecccccccccCCCCcc---cccceEECCCCCEEEEecCC------------------
Confidence 322 36889998875 221111 111 01111 00116899999998877521
Q ss_pred CCCCeEEEEECCCCceEEE
Q 002209 549 GNIPFLDLFDINTGSKERI 567 (953)
Q Consensus 549 ~~~~~L~~~d~~~~~~~~l 567 (953)
...+.+||+.+.....+
T Consensus 294 --~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 294 --SRELKVFTISGKVVGYV 310 (331)
T ss_dssp --TTEEEEEETTSCEEEEC
T ss_pred --CCcEEEEEecCCcccce
Confidence 22589999987665544
No 139
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.1e-16 Score=180.30 Aligned_cols=309 Identities=9% Similarity=-0.035 Sum_probs=185.1
Q ss_pred CCCCceecCCCCEEEEEecCCCC----CccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecC
Q 002209 110 PLPALSFSPQRDKILFLKRRALP----PLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~ 185 (953)
.+.+++|||||++||.++.+... ....+......+..+.+.|++. . .+|++.+ +. ....++ +
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~--~--------~~~~~~~-~~--~~~~~~-~ 82 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEF--E--------NKLDFEL-AQ--QNGLLN-S 82 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCC--C--------CTTTTSC-CC--SSCSST-T
T ss_pred cEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCC--c--------ceEEEEe-CC--CceEee-c
Confidence 68899999999999998876211 1111122223344566666651 1 2222321 11 111122 2
Q ss_pred CCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCC
Q 002209 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (953)
Q Consensus 186 ~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 265 (953)
.....+...+|||||++||.... ...+.+++.++ ....+. +........+..++|||||+.|+.+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~---------dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs--- 148 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSN---------NGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN--- 148 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEET---------TSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE---
T ss_pred CCCCcEEEEEECCCCCEEEEEeC---------CCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEc---
Confidence 33347999999999999998663 44566677544 222232 22100011266899999999999772
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--------eeEe----CCC-
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--------VKEI----GPP- 331 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--------~~~l----~~~- 331 (953)
..+.|.++++ ++. ...+ ...
T Consensus 149 ----------------------------------------------~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 149 ----------------------------------------------EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK 182 (588)
T ss_dssp ----------------------------------------------TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC
T ss_pred ----------------------------------------------CCCEEEEEECCCCccccccceeeeeeeccccccc
Confidence 2245666677 553 2333 222
Q ss_pred CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE----EeccCCCcccCCccccccccCccceeec
Q 002209 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR----ELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (953)
Q Consensus 332 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~----~l~~~~~~~~~p~~~~~~~~~~~~~~ws 407 (953)
..+.+++||||| |+..+.+ +.+++|+++++... .+... ....+.+++|+
T Consensus 183 ~~V~sVawSPdg--Laass~D-------------~tVrlWd~~~~~~~~~~~tL~~~------------h~~~V~svaFs 235 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALSN-------------NSVFSMTVSASSHQPVSRMIQNA------------SRRKITDLKIV 235 (588)
T ss_dssp CCEEEEEEETTE--EEEEETT-------------CCEEEECCCSSSSCCCEEEEECC------------CSSCCCCEEEE
T ss_pred ccEEEEEEcCCc--EEEEeCC-------------CeEEEEECCCCccccceeeeccc------------ccCcEEEEEEE
Confidence 578899999999 6655534 38999999876532 23211 11345689999
Q ss_pred cCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe-ecccccCCeee--ccCCceEEEEEecccCceEEE
Q 002209 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISW--CDDSLALVYESWYKTRRTRTW 484 (953)
Q Consensus 408 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~-~~~~~~~~~~~--SpDg~~l~~~~~~~~~~~~l~ 484 (953)
|+.|+-. . .+.|.+|++ .+++...+. .+...+..++| ||||+.|+.+.+.+ . +||
T Consensus 236 --g~~LASa-------------~-~~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG--~-klw 293 (588)
T 2j04_A 236 --DYKVVLT-------------C-PGYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTS--Y-KVL 293 (588)
T ss_dssp --TTEEEEE-------------C-SSEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCE--E-EEE
T ss_pred --CCEEEEE-------------e-CCeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCC--C-EEE
Confidence 5555544 2 368999996 555553443 55666788999 99998877765433 2 688
Q ss_pred EEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCce
Q 002209 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSK 564 (953)
Q Consensus 485 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~ 564 (953)
..+ . ++++|||..+++. +. .+++|+..+++.
T Consensus 294 ~~d--~------------------------~~~spd~~l~a~~--d~---------------------~v~lW~~~g~~l 324 (588)
T 2j04_A 294 LED--E------------------------LHVTADNIIAPYL--EK---------------------KFKKWSTIWNEF 324 (588)
T ss_dssp ESS--S------------------------EEEECCCSSHHHH--HH---------------------HHHHTTTTTTSS
T ss_pred eec--c------------------------EEECCCceEEEEc--CC---------------------EEEEEECCCCce
Confidence 765 1 6689999888774 11 266777765553
Q ss_pred EEEeccCcccceeeeEeeccCCccccccccCCEEEEEEe
Q 002209 565 ERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKE 603 (953)
Q Consensus 565 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 603 (953)
..+ .+ . ..+ ...+|||||+.++..+.
T Consensus 325 ~~~-~~--~------~~I----~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 325 NNY-ET--T------LVI----HGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SSS-CC--E------EEE----EEEEECTTSSEEEEEEE
T ss_pred eee-cc--c------eEE----EEEEECCCCCEEEEEEe
Confidence 211 11 1 001 12478999988776444
No 140
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.68 E-value=2.6e-16 Score=176.31 Aligned_cols=213 Identities=10% Similarity=0.111 Sum_probs=137.6
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCC-------CCCCCccchHHH
Q 002209 634 LASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSP-------NEFPRIGSTSVL 706 (953)
Q Consensus 634 ~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 706 (953)
...+..+.+++.+.+|..+++++++|++. +++.|+||++||+..... .+.+.. ..|.......+.
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vv~~HG~g~~~~----~~~~~~g~~~~~~~~y~~~~~~~a~ 158 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI----NKPVPAILCIPGSGGNKE----GLAGEPGIAPKLNDRYKDPKLTQAL 158 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC----CSCEEEEEEECCTTCCHH----HHHTCCCSSSTTCCSTTCTTTCHHH
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC----CCCccEEEEEcCCCCCcc----cccccccccccccccccchHHHHHH
Confidence 44567789999999999999999999863 246999999999643110 000000 001100013577
Q ss_pred HHHHcCcEEEEcCCCCCCCCCChhh----------------------hhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Q 002209 707 LWLARGFAILGGPTTPIIGEGDEEA----------------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVG 764 (953)
Q Consensus 707 ~la~~G~~V~~~~~~~~~G~G~~~~----------------------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~ 764 (953)
.|+++||+|+++|++ |+|.+.. ...+....+.|+.++++||.+++.+|++||+|+
T Consensus 159 ~la~~Gy~Vl~~D~r---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~ 235 (398)
T 3nuz_A 159 NFVKEGYIAVAVDNP---AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVS 235 (398)
T ss_dssp HHHTTTCEEEEECCT---TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEE
T ss_pred HHHHCCCEEEEecCC---CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 899999999997665 4444421 112334466899999999999988999999999
Q ss_pred EeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC-----CC----------cCcccccchh---hhhHHHHHhcCccccc
Q 002209 765 GHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-----TP----------FGFQNEDRTL---WEATSTYVEMSPFMSA 826 (953)
Q Consensus 765 G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~-----~~----------~~~~~~~~~~---~~~~~~~~~~sp~~~~ 826 (953)
||||||++|+.+++.. ++++|+|+.++++.... .. ..+....... ++..+.....
T Consensus 236 G~S~GG~~a~~~aa~~-~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~------ 308 (398)
T 3nuz_A 236 GFSLGTEPMMVLGTLD-TSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAAL------ 308 (398)
T ss_dssp EEGGGHHHHHHHHHHC-TTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTHHHHCCHHHHHHHT------
T ss_pred EECHhHHHHHHHHhcC-CcEEEEEEecccccchhhhhhhccccccccccCCccHHHhcchHhhhCCHHHHHHhh------
Confidence 9999999999999887 57899988765433100 00 0000000000 1111111111
Q ss_pred CCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeC
Q 002209 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILP 871 (953)
Q Consensus 827 ~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 871 (953)
...|+||+||+.|.. ..+..++|+++.. ..++++++||
T Consensus 309 --ap~PlLii~G~~D~~----v~~~~~~y~~~g~-~~~~~~~~~p 346 (398)
T 3nuz_A 309 --APRPIILTEGGLDRD----LDLVRKAYAIVGT-PDNVKIYHYK 346 (398)
T ss_dssp --TTSCEEECSCBCHHH----HHHHHHHHHHHTC-TTSEEECCCG
T ss_pred --CCCcEEEeeCCchHH----HHHHHHHHHHcCC-CcceEEEEeC
Confidence 246999999999954 5667777776643 3467777777
No 141
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.68 E-value=6.2e-16 Score=168.75 Aligned_cols=114 Identities=17% Similarity=0.155 Sum_probs=94.5
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeC
Q 002209 760 KIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGE 839 (953)
Q Consensus 760 ~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~ 839 (953)
++.++||||||.+++.++.++|++++++|+++|... ..+......+++|+|++||+
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------~~~~~~~~~~~~PvLii~G~ 254 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------PKPEDVKPLTSIPVLVVFGD 254 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------CCGGGCGGGTTSCEEEEECS
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------CCHHHHhhccCCCEEEEecc
Confidence 899999999999999999999999999999987531 01111223356899999999
Q ss_pred CCCCCCCch-----HHHHHHHHHHHhCCCcEEEEEeCCCC-----ccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 840 EDNNSGTLT-----MQSDRFFNALKGHGALCRLVILPFES-----HGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 840 ~D~~v~~~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~-----H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+|..+| . +.++++++.+++.|.+++++++|++| |.+....+...+.+.+.+||++++.
T Consensus 255 ~D~~~p--~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 255 HIEEFP--RWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA 322 (328)
T ss_dssp SCTTCT--TTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC
T ss_pred CCcccc--chhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhccc
Confidence 999987 7 88999999999988899999999655 9876555478899999999998764
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=2.9e-14 Score=155.77 Aligned_cols=298 Identities=8% Similarity=-0.024 Sum_probs=174.9
Q ss_pred ceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002209 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (953)
Q Consensus 193 ~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 272 (953)
.+.|+++++.++.+.. ....|+++|+++++.......+... . .++|+|||+.|+++..
T Consensus 2 ~~~~~~~~~~~~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~~----~-~~~~s~dg~~l~~~~~--------- 59 (331)
T 3u4y_A 2 NAMFQTTSNFGIVVEQ--------HLRRISFFSTDTLEILNQITLGYDF----V-DTAITSDCSNVVVTSD--------- 59 (331)
T ss_dssp -----CCCCEEEEEEG--------GGTEEEEEETTTCCEEEEEECCCCE----E-EEEECSSSCEEEEEES---------
T ss_pred ceeEcCCCCEEEEEec--------CCCeEEEEeCcccceeeeEEccCCc----c-eEEEcCCCCEEEEEeC---------
Confidence 3567788877666542 3568999999998876655443321 4 8899999998887610
Q ss_pred CCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce--eEeCCCCcccc-cccCCCCcEEEE
Q 002209 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--KEIGPPAVYTS-LDPSPDEKYILI 348 (953)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~--~~l~~~~~~~~-~~~SpDG~~l~~ 348 (953)
....|+++|+ +++. ..+........ ++|||||++|+
T Consensus 60 ---------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~- 99 (331)
T 3u4y_A 60 ---------------------------------------FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV- 99 (331)
T ss_dssp ---------------------------------------TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-
T ss_pred ---------------------------------------CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-
Confidence 2347889999 7764 44444444555 89999999998
Q ss_pred EEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002209 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (953)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (953)
+..... ....|++||+++++........ ..+..++|+|||+.+++. ..
T Consensus 100 ~~~~~~---------~~~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~spdg~~l~~~-~~--------- 147 (331)
T 3u4y_A 100 TVTGLN---------HPFNMQSYSFLKNKFISTIPIP-------------YDAVGIAISPNGNGLILI-DR--------- 147 (331)
T ss_dssp ECCCSS---------SSCEEEEEETTTTEEEEEEECC-------------TTEEEEEECTTSSCEEEE-EE---------
T ss_pred EecCCC---------CcccEEEEECCCCCeEEEEECC-------------CCccceEECCCCCEEEEE-ec---------
Confidence 432210 1127999999876654432211 123578999999976554 11
Q ss_pred cccCCe-EEEEecCCCCCCCceE----EeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCc-EEeecCC
Q 002209 429 VTPRDI-IYTQQAEPVQGEGPEI----LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP-RILFDRS 502 (953)
Q Consensus 429 ~~~~~~-l~~~d~~~~~g~~~~~----l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~-~~~~~~~ 502 (953)
..+. +++|++ ...+.... ..........+.|+|||++|++....+ . .++++++.++.... .......
T Consensus 148 --~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-~--~v~v~d~~~~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 148 --SSANTVRRFKI--DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG-N--SIGILETQNPENITLLNAVGTN 220 (331)
T ss_dssp --TTTTEEEEEEE--CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT-T--EEEEEECSSTTSCEEEEEEECS
T ss_pred --CCCceEEEEEE--CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC-C--eEEEEECCCCcccceeeeccCC
Confidence 1234 777775 12222211 112223345689999999988776443 2 68888887752100 2222211
Q ss_pred CccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEee
Q 002209 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (953)
Q Consensus 503 ~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 582 (953)
..... +.|+|||++|+..... ...|++||+.+++.+.+.......... ...
T Consensus 221 -~~~~~------~~~spdg~~l~v~~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~ 271 (331)
T 3u4y_A 221 -NLPGT------IVVSRDGSTVYVLTES--------------------TVDVFNFNQLSGTLSFVKSFGHGLLID--PRP 271 (331)
T ss_dssp -SCCCC------EEECTTSSEEEEECSS--------------------EEEEEEEETTTTEEEEEEEEECCCCCC--CGG
T ss_pred -CCCce------EEECCCCCEEEEEEcC--------------------CCEEEEEECCCCceeeecccccccccC--CCC
Confidence 11111 7899999988776421 124899999998876553222110000 000
Q ss_pred ccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeE
Q 002209 583 MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (953)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~ 623 (953)
.......+|+|||+.+++..... ..+.++++.+.....
T Consensus 272 ~~~~~~~~~spdg~~l~v~~~~~---~~v~v~d~~~~~~~~ 309 (331)
T 3u4y_A 272 LFGANQMALNKTETKLFISANIS---RELKVFTISGKVVGY 309 (331)
T ss_dssp GTTCCCEEECTTSSEEEEEETTT---TEEEEEETTSCEEEE
T ss_pred cccccceEECCCCCEEEEecCCC---CcEEEEEecCCcccc
Confidence 00002247999999887765533 468888876654433
No 143
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.67 E-value=1.1e-14 Score=180.14 Aligned_cols=262 Identities=11% Similarity=0.084 Sum_probs=174.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++||+...+ +.|.|||+.+ + .....+.. ...
T Consensus 15 ~v~~i~~sp~~~~la~~~~~---------------------------------g~v~iwd~~~-~--~~~~~~~~--~~~ 56 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYS---------------------------------GRVEIWNYET-Q--VEVRSIQV--TET 56 (814)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CSS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CEEEEEECCC-C--ceEEEEec--CCC
Confidence 56789999999999998764 3679999843 2 22344443 234
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..+.|||||++|++... ...|.++++.+++........... +..++|+|||+.|+...
T Consensus 57 ~v~~~~~s~~~~~l~~~~~---------dg~i~vw~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~------- 116 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSD---------DFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGS------- 116 (814)
T ss_dssp CEEEEEEEGGGTEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEeCCCCEEEEEeC---------CCeEEEEECCCCcEEEEEecCCCC----EEEEEEeCCCCEEEEEc-------
Confidence 7899999999999998652 568899999888764433322222 77899999999988661
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-ce-eEeCCC-CcccccccCC-CCc
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TV-KEIGPP-AVYTSLDPSP-DEK 344 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-~~-~~l~~~-~~~~~~~~Sp-DG~ 344 (953)
..+.|.++++ ++ .. ..+... ..+..++|+| ||+
T Consensus 117 ------------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 117 ------------------------------------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp ------------------------------------------TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred ------------------------------------------CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 2245667777 44 33 334333 6788999999 888
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeecc--CCCCceEEEEecc
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS--DKPSTLYWAETQD 421 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp--Dg~~i~~~~~~~~ 421 (953)
.|+..+.+ +.|.+||+.++.. ..+.... ...+..+.|+| ||+.++..
T Consensus 155 ~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~l~~~----- 204 (814)
T 3mkq_A 155 TFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKPYMITA----- 204 (814)
T ss_dssp EEEEEETT-------------SEEEEEETTCSSCSEEEECCC------------TTCCCEEEECCSTTCCEEEEE-----
T ss_pred EEEEEeCC-------------CeEEEEECCCCcceeEEecCC------------CCCEEEEEEEECCCCCEEEEE-----
Confidence 88887744 3899999975432 2222211 12346789999 88866665
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecC
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 501 (953)
+..+.+.+|+. .++.....+..+...+..+.|+|||+.|+..+.++ .|.++++.++ +.......
T Consensus 205 --------~~dg~i~~~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~v~vwd~~~~--~~~~~~~~ 268 (814)
T 3mkq_A 205 --------SDDLTIKIWDY--QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG----TLKIWNSSTY--KVEKTLNV 268 (814)
T ss_dssp --------CTTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTC--SEEEEECC
T ss_pred --------eCCCEEEEEEC--CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--cEEEEeec
Confidence 44568999996 23322334455666778899999999888776443 4556676664 33333333
Q ss_pred CCccccCCCCCCCeEeccCCCE
Q 002209 502 SSEDVYSDPGSPMMRRTSTGTY 523 (953)
Q Consensus 502 ~~~~~~~~~~~p~~~~SpDG~~ 523 (953)
....+.. ++|+|+|+.
T Consensus 269 ~~~~v~~------~~~~~~~~~ 284 (814)
T 3mkq_A 269 GLERSWC------IATHPTGRK 284 (814)
T ss_dssp SSSSEEE------EEECTTCGG
T ss_pred CCCcEEE------EEEccCCCc
Confidence 3333333 788999984
No 144
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.67 E-value=6e-16 Score=152.16 Aligned_cols=173 Identities=12% Similarity=0.055 Sum_probs=121.8
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~ 748 (953)
+.|+||++||.... ...+ ........|+++||.|+.+++ +|+|.+..... .....+++..+++
T Consensus 3 ~~~~vv~~HG~~~~-----------~~~~--~~~~~~~~l~~~g~~v~~~d~---~g~g~s~~~~~-~~~~~~~~~~~~~ 65 (176)
T 2qjw_A 3 SRGHCILAHGFESG-----------PDAL--KVTALAEVAERLGWTHERPDF---TDLDARRDLGQ-LGDVRGRLQRLLE 65 (176)
T ss_dssp SSCEEEEECCTTCC-----------TTSH--HHHHHHHHHHHTTCEEECCCC---HHHHTCGGGCT-TCCHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCC-----------ccHH--HHHHHHHHHHHCCCEEEEeCC---CCCCCCCCCCC-CCCHHHHHHHHHH
Confidence 37899999995311 1111 112345677889999999554 56666543211 1222344455556
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCC
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANK 828 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 828 (953)
++.+.. +.++++++|||+||.+++.++.++| ++++|+++|..+... + ....+
T Consensus 66 ~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~----~--------------------~~~~~ 117 (176)
T 2qjw_A 66 IARAAT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP----L--------------------PALDA 117 (176)
T ss_dssp HHHHHH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT----B--------------------CCCCC
T ss_pred HHHhcC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccc----c--------------------Ccccc
Confidence 665543 3479999999999999999999997 999999998754311 0 00456
Q ss_pred CCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 829 LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 829 i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+++|+|++||++|..+| ++.+.++++.+ +++++++ +++|.+ .+....+.+.+.+||++
T Consensus 118 ~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~-~~~H~~--~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 118 AAVPISIVHAWHDELIP--AADVIAWAQAR-----SARLLLV-DDGHRL--GAHVQAASRAFAELLQS 175 (176)
T ss_dssp CSSCEEEEEETTCSSSC--HHHHHHHHHHH-----TCEEEEE-SSCTTC--TTCHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEcCCCCccC--HHHHHHHHHhC-----CceEEEe-CCCccc--cccHHHHHHHHHHHHHh
Confidence 78999999999999998 99999998887 3578888 889987 35667777888888764
No 145
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.67 E-value=2e-15 Score=159.94 Aligned_cols=213 Identities=15% Similarity=0.154 Sum_probs=135.0
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCC
Q 002209 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (953)
Q Consensus 643 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (953)
++...||.+++...+- . -|.||++||.+... ..| ......|+++||.|+++ |
T Consensus 2 ~~~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~~-----------~~w----~~~~~~l~~~g~~vi~~---D 53 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG--------S--GKPVLFSHGWLLDA-----------DMW----EYQMEYLSSRGYRTIAF---D 53 (271)
T ss_dssp EEECTTSCEEEEEEES--------S--SSEEEEECCTTCCG-----------GGG----HHHHHHHHTTTCEEEEE---C
T ss_pred eEEcCCCCEEEEEccC--------C--CCeEEEECCCCCcH-----------HHH----HHHHHHHHhCCceEEEe---c
Confidence 3567899988776652 1 24588899963211 011 13345677889999994 5
Q ss_pred CCCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCcccEEEEcccCCCCCCC
Q 002209 723 IIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA-HAPHLFCCGIARSGAYNRTLT 799 (953)
Q Consensus 723 ~~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~~~~d~~~~ 799 (953)
.+|+|.+..+ ........+|+.+.++.+ +.+++.|+||||||.+++.+++ +.|++++++|++++.......
T Consensus 54 ~~G~G~S~~~~~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~ 127 (271)
T 3ia2_A 54 RRGFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127 (271)
T ss_dssp CTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBC
T ss_pred CCCCccCCCCCCCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccC
Confidence 5677877543 223566778887777765 2468999999999986666555 458899999998764321100
Q ss_pred ----CcCccccc-----chhhh--------------------------------------------hHHHHHhcCccccc
Q 002209 800 ----PFGFQNED-----RTLWE--------------------------------------------ATSTYVEMSPFMSA 826 (953)
Q Consensus 800 ----~~~~~~~~-----~~~~~--------------------------------------------~~~~~~~~sp~~~~ 826 (953)
+....... ..... ....+...+....+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (271)
T 3ia2_A 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDM 207 (271)
T ss_dssp BTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHH
T ss_pred CCCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccc
Confidence 00000000 00000 00001111222345
Q ss_pred CCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 827 ~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
.++++|+|++||++|..+| ++.+.+++..+.. ..+++++|++||.+. .+..+.+.+.+.+||.
T Consensus 208 ~~i~~P~Lvi~G~~D~~~p--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 208 AKIDVPTLVIHGDGDQIVP--FETTGKVAAELIK---GAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK 270 (271)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHST---TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEEeCCCCcCC--hHHHHHHHHHhCC---CceEEEEcCCCCccc-ccCHHHHHHHHHHHhh
Confidence 7899999999999999998 8776555554422 258999999999864 5667788888888875
No 146
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=3.6e-15 Score=164.27 Aligned_cols=275 Identities=12% Similarity=0.065 Sum_probs=169.0
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..|+| ||++|+|+....+........+||++++++++.+++ .. +..+.|||||+.|+|......
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~------~~~~~~SpDg~~la~~~~~~~--- 81 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---EN------ATMPRISPDGKKIAFMRANEE--- 81 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ES------CEEEEECTTSSEEEEEEEETT---
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---cc------CCCeEECCCCCEEEEEEeccC---
Confidence 5677888 999999987643222233477899999999988877 22 558999999999998721100
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYIL 347 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~ 347 (953)
+ +..+||++++ +|+.+.++.. . +..+.|||||++|+
T Consensus 82 ----------------------------------~-------~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~ 119 (347)
T 2gop_A 82 ----------------------------------K-------KVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLL 119 (347)
T ss_dssp ----------------------------------T-------TEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEE
T ss_pred ----------------------------------C-------CcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEE
Confidence 0 2357999999 8888777655 5 88899999999999
Q ss_pred EEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccc
Q 002209 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (953)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~ 427 (953)
|.+.+.+. ....+.+ ..+.|..||.....
T Consensus 120 ~~~~~~~~-------------------~~~~~~~--------------------~~~~~~~~g~~~~~------------ 148 (347)
T 2gop_A 120 IVGFKRRE-------------------DEDFIFE--------------------DDVPAWFDDLGFFD------------ 148 (347)
T ss_dssp EEEECCCC------------------------------------------------CCCC--------------------
T ss_pred EEEccCCC-------------------cCCcEEE--------------------cccceeecCccccc------------
Confidence 99843100 0000000 11224444432110
Q ss_pred ccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEeccc-----C-ceEEEEEcCCCCCCCcEEeec
Q 002209 428 EVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKT-----R-RTRTWVISPGSKDVAPRILFD 500 (953)
Q Consensus 428 ~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~-----~-~~~l~~~d~~~~~~~~~~~~~ 500 (953)
.....|+++++ .+++. +.++. . .+..+.||||| |+|...... . ..+||.++ ++ +.+.++.
T Consensus 149 --~~~~~l~~~d~---~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~--~~~~l~~ 215 (347)
T 2gop_A 149 --GEKTTFWIFDT---ESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DG--KEEKMFE 215 (347)
T ss_dssp ---CEEEEEEEET---TTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TT--EEEEEEE
T ss_pred --CccceEEEEEC---CCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CC--ceEEecc
Confidence 12457899996 56666 66766 4 67789999999 666654432 1 46899999 42 4455554
Q ss_pred CCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeE
Q 002209 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (953)
Q Consensus 501 ~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~ 580 (953)
. . .. ..+||||++|+|...... ........|+++| +++.++++..... .+.
T Consensus 216 ~-~-~~--------~~~spdg~~l~~~~~~~~-------------~~~~~~~~l~~~d--~~~~~~l~~~~~~----~~~ 266 (347)
T 2gop_A 216 K-V-SF--------YAVDSDGERILLYGKPEK-------------KYMSEHNKLYIYD--GKEVMGILDEVDR----GVG 266 (347)
T ss_dssp E-E-SE--------EEEEECSSCEEEEECCSS-------------SCCCSSCEEEEEC--SSCEEESSTTCCS----EEE
T ss_pred C-c-ce--------eeECCCCCEEEEEEcccc-------------CCccccceEEEEC--CCceEeccccCCc----ccC
Confidence 3 1 11 345999999999874321 0011245799999 7777777765322 011
Q ss_pred eeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEEec
Q 002209 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITD 626 (953)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt~ 626 (953)
. .+.|+ |+ +++...... ...|| ++ +|+.+.++.
T Consensus 267 ~------~~~~s-dg--~~~~~~~~~-~~~l~-~~--~g~~~~~~~ 299 (347)
T 2gop_A 267 Q------AKIKD-GK--VYFTLFEEG-SVNLY-IW--DGEIKPIAK 299 (347)
T ss_dssp E------EEEET-TE--EEEEEEETT-EEEEE-EE--SSSEEEEEC
T ss_pred C------ccEEc-Cc--EEEEEecCC-cEEEE-Ec--CCceEEEec
Confidence 1 14577 76 555544433 35677 77 566666653
No 147
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.67 E-value=5.5e-16 Score=163.10 Aligned_cols=188 Identities=15% Similarity=0.157 Sum_probs=130.5
Q ss_pred EEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh
Q 002209 654 ATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND 733 (953)
Q Consensus 654 ~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~ 733 (953)
+.+|.|.....+ .++.|+||++||+... ..........|+++||.|+.+++++. +.
T Consensus 34 ~~~~~p~~~~~~-g~~~p~vv~~HG~~~~---------------~~~~~~~~~~l~~~G~~v~~~d~~~s---~~----- 89 (258)
T 2fx5_A 34 CRIYRPRDLGQG-GVRHPVILWGNGTGAG---------------PSTYAGLLSHWASHGFVVAAAETSNA---GT----- 89 (258)
T ss_dssp EEEEEESSTTGG-GCCEEEEEEECCTTCC---------------GGGGHHHHHHHHHHTCEEEEECCSCC---TT-----
T ss_pred EEEEeCCCCccc-CCCceEEEEECCCCCC---------------chhHHHHHHHHHhCCeEEEEecCCCC---cc-----
Confidence 778888752211 1258999999996321 01123456678889999999777531 11
Q ss_pred hhHHHHHHHHHHHHHHHHHc---------CCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcc
Q 002209 734 RFVEQLVACAEAAVEEVVRR---------GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQ 804 (953)
Q Consensus 734 ~~~~~~~~D~~~~~~~l~~~---------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~ 804 (953)
..|+..+++++.+. ..+|.++++|+||||||.+++.++ .+++++++++++|..... .
T Consensus 90 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~----~-- 155 (258)
T 2fx5_A 90 ------GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL----G-- 155 (258)
T ss_dssp ------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST----T--
T ss_pred ------HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc----c--
Confidence 12333444444432 246778999999999999999887 446899999988753210 0
Q ss_pred cccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHH-HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH
Q 002209 805 NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHGALCRLVILPFESHGYAARESI 883 (953)
Q Consensus 805 ~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 883 (953)
.....+.++++|+|++||++|..+| +.. +.++++. .+.+++++++++++|.+.. +..
T Consensus 156 ----------------~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~ 213 (258)
T 2fx5_A 156 ----------------HDSASQRRQQGPMFLMSGGGDTIAF--PYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSG 213 (258)
T ss_dssp ----------------CCGGGGGCCSSCEEEEEETTCSSSC--HHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTC
T ss_pred ----------------cchhhhccCCCCEEEEEcCCCcccC--chhhHHHHHhc---cCCCeEEEEECCCCCcccc-chH
Confidence 0112456788999999999999998 775 7777766 3467899999999998753 334
Q ss_pred HHHHHHHHHHHHHhccCC
Q 002209 884 MHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 884 ~~~~~~i~~fl~~~l~~~ 901 (953)
..+.+.+.+||++++...
T Consensus 214 ~~~~~~i~~fl~~~l~~~ 231 (258)
T 2fx5_A 214 GAYRGPSTAWFRFQLMDD 231 (258)
T ss_dssp GGGHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCc
Confidence 577888999999888643
No 148
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.67 E-value=5.4e-15 Score=162.36 Aligned_cols=230 Identities=10% Similarity=0.061 Sum_probs=142.7
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+...+|+||+ +|+... ....|.++|+++++...............+..++|+|||++|+...
T Consensus 84 ~v~~~~~s~d~-~l~~~s---------~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs------- 146 (344)
T 4gqb_B 84 GVADLTWVGER-GILVAS---------DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS------- 146 (344)
T ss_dssp CEEEEEEETTT-EEEEEE---------TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------
T ss_pred CEEEEEEeCCC-eEEEEE---------CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-------
Confidence 57889999996 455543 2457788888877643322111001122277899999999998761
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDG~~l 346 (953)
..+.|.++|+ +|+.. .+... ..+..++|+|||+.+
T Consensus 147 ------------------------------------------~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 147 ------------------------------------------KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 2245667788 77543 44444 778899999999866
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
+++... .+.|.+||+..++ ...+..... ...+..++|+|++..++...
T Consensus 185 l~s~s~------------D~~v~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~p~~~~~l~sg-------- 233 (344)
T 4gqb_B 185 FLSCSE------------DNRILLWDTRCPKPASQIGCSAP-----------GYLPTSLAWHPQQSEVFVFG-------- 233 (344)
T ss_dssp EEEEET------------TSCEEEEETTSSSCEEECC---------------CCCEEEEEECSSCTTEEEEE--------
T ss_pred eeeecc------------ccccccccccccceeeeeeccee-----------eccceeeeecCCCCcceEEe--------
Confidence 554422 2389999998544 333332110 01235789999877655431
Q ss_pred ccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCce-EEEEEecccCceEEEEEcCCCCCCCcEEeecCCCc
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLA-LVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSE 504 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~-l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 504 (953)
+..+.|.+||+ .++.....+..+...+..++|||||.. |+..+.++ .|.++|..++ + ......+..
T Consensus 234 ----~~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~----~i~vwd~~~~--~-~~~~~~H~~ 300 (344)
T 4gqb_B 234 ----DENGTVSLVDT--KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC----SLAVLDSSLS--E-LFRSQAHRD 300 (344)
T ss_dssp ----ETTSEEEEEES--CC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS----CEEEECTTCC--E-EEEECCCSS
T ss_pred ----ccCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC----eEEEEECCCC--c-EEEEcCCCC
Confidence 33557899996 344445566777777889999999965 44444333 3555677664 2 222334444
Q ss_pred cccCCCCCCCeEeccCCCEEEEEe
Q 002209 505 DVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 505 ~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
.+.. ++|||||+.++...
T Consensus 301 ~V~~------v~~sp~~~~llas~ 318 (344)
T 4gqb_B 301 FVRD------ATWSPLNHSLLTTV 318 (344)
T ss_dssp CEEE------EEECSSSTTEEEEE
T ss_pred CEEE------EEEeCCCCeEEEEE
Confidence 4444 88999998766543
No 149
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.67 E-value=3e-15 Score=158.92 Aligned_cols=219 Identities=10% Similarity=0.150 Sum_probs=139.8
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCC
Q 002209 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (953)
Q Consensus 643 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (953)
.+...+|..+ .+|.|.+ ++.|+|||+|||.+..+ +...+ .......+++.||.|+.++|+.
T Consensus 8 ~~~~~~~~~~--~~y~p~~------~~~p~iv~~HGGg~~~g--------~~~~~---~~~~~~~l~~~g~~Vi~vdYrl 68 (274)
T 2qru_A 8 NQTLANGATV--TIYPTTT------EPTNYVVYLHGGGMIYG--------TKSDL---PEELKELFTSNGYTVLALDYLL 68 (274)
T ss_dssp EEECTTSCEE--EEECCSS------SSCEEEEEECCSTTTSC--------CGGGC---CHHHHHHHHTTTEEEEEECCCC
T ss_pred cccccCCeeE--EEEcCCC------CCCcEEEEEeCccccCC--------Chhhc---hHHHHHHHHHCCCEEEEeCCCC
Confidence 3444567554 6787753 24799999999864332 11111 1223445677899999988863
Q ss_pred CCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCcccEEEEcccCCCCCCC
Q 002209 723 IIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA---HAPHLFCCGIARSGAYNRTLT 799 (953)
Q Consensus 723 ~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~~~~d~~~~ 799 (953)
. . +..++..++|+.++++|+.++.. ++++|+|+|+|+||.+|+.++. ..+..++++++++|..+....
T Consensus 69 a---P-----e~~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~ 139 (274)
T 2qru_A 69 A---P-----NTKIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFI 139 (274)
T ss_dssp T---T-----TSCHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGG
T ss_pred C---C-----CCCCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccccccc
Confidence 2 1 23457889999999999987642 2679999999999999999987 356788999988887662111
Q ss_pred Cc----Ccc-----------c-c--cchhhhh-H------------HHHHhc-C-------ccc--ccCCCCCcEEEEEe
Q 002209 800 PF----GFQ-----------N-E--DRTLWEA-T------------STYVEM-S-------PFM--SANKLKKPILLVHG 838 (953)
Q Consensus 800 ~~----~~~-----------~-~--~~~~~~~-~------------~~~~~~-s-------p~~--~~~~i~~P~Li~~G 838 (953)
.. .+. . . ....+.. . ..+... . ++. .+.++ .|+||++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G 218 (274)
T 2qru_A 140 KEPRKLLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTAS 218 (274)
T ss_dssp GSCCCSCSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEE
T ss_pred CCchhhccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEe
Confidence 00 000 0 0 0000000 0 011100 0 011 12445 79999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc---ccHHHHHHHHHHHHHH
Q 002209 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR---ESIMHVLWETDRWLQK 896 (953)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~ 896 (953)
+.|..++ ..+++++.+++. +++++++++++|++... .....+.+.+.+||.+
T Consensus 219 ~~D~~~~--~~~~~~l~~~~~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 219 SSDEEVP--FRYSKKIGRTIP----ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp TTCSSSC--THHHHHHHHHST----TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred cCCCCcC--HHHHHHHHHhCC----CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 9999988 888877776654 46999999999997422 2234567788888865
No 150
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.67 E-value=1.3e-14 Score=163.04 Aligned_cols=233 Identities=15% Similarity=0.134 Sum_probs=146.8
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..+.|||||++|+... ....|.++|+++++........... +..++|+|||+.|+...
T Consensus 125 ~v~~v~~s~dg~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~p~~~~l~s~s------- 184 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGA---------EDRLIRIWDIENRKIVMILQGHEQD----IYSLDYFPSGDKLVSGS------- 184 (393)
T ss_dssp BEEEEEECTTSSEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEE-------
T ss_pred eEEEEEECCCCCEEEEEc---------CCCeEEEEECCCCcEEEEEccCCCC----EEEEEEcCCCCEEEEec-------
Confidence 477899999999998855 2568888999988765544333322 77899999999988661
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-eCCCCcccccccCC-CCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPPAVYTSLDPSP-DEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-l~~~~~~~~~~~Sp-DG~~l 346 (953)
..+.|.++|+ +++... +.....+..++|+| ||++|
T Consensus 185 ------------------------------------------~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 185 ------------------------------------------GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp ------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred ------------------------------------------CCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 2245667788 775433 33336678889999 99999
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
+..+.+. .|.+||+.++.. ..+...... ..+....+..++|+|||+.++..
T Consensus 223 ~~~s~d~-------------~v~iwd~~~~~~~~~~~~~~~~------~~~h~~~v~~v~~~~~g~~l~s~--------- 274 (393)
T 1erj_A 223 AAGSLDR-------------AVRVWDSETGFLVERLDSENES------GTGHKDSVYSVVFTRDGQSVVSG--------- 274 (393)
T ss_dssp EEEETTS-------------CEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSEEEEE---------
T ss_pred EEEcCCC-------------cEEEEECCCCcEEEeecccccC------CCCCCCCEEEEEECCCCCEEEEE---------
Confidence 8887443 899999985543 333211100 01222345689999999876654
Q ss_pred ccccccCCeEEEEecCCCC---------CCC-ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCc
Q 002209 426 KVEVTPRDIIYTQQAEPVQ---------GEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP 495 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~---------g~~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 495 (953)
+..+.|.+||+.... .+. ...+..+...+..++|+|+|++|+..+.++ .+.++|..++ +.
T Consensus 275 ----s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~----~v~iwd~~~~--~~ 344 (393)
T 1erj_A 275 ----SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR----GVLFWDKKSG--NP 344 (393)
T ss_dssp ----ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS----EEEEEETTTC--CE
T ss_pred ----eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC----eEEEEECCCC--eE
Confidence 445678888861100 001 112334455567789999999988776543 5666677664 33
Q ss_pred EEeecCCCccccCCCCCCCeEe------ccCCCEEEEEe
Q 002209 496 RILFDRSSEDVYSDPGSPMMRR------TSTGTYVIAKI 528 (953)
Q Consensus 496 ~~~~~~~~~~~~~~~~~p~~~~------SpDG~~l~~~~ 528 (953)
..........+.. +.| +|++++|+...
T Consensus 345 ~~~l~~h~~~v~~------v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 345 LLMLQGHRNSVIS------VAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp EEEEECCSSCEEE------EEECSSCTTCTTCEEEEEEE
T ss_pred EEEECCCCCCEEE------EEecCCcCcCCCCCEEEEEC
Confidence 3334433333332 344 45787777665
No 151
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.67 E-value=3.3e-15 Score=165.80 Aligned_cols=202 Identities=10% Similarity=0.056 Sum_probs=134.6
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+...+|||||++|+... ++....|.++|+++++.......... +..++|+|||++|+..
T Consensus 135 ~~~~v~fSpDg~~la~as-------~~~d~~i~iwd~~~~~~~~~~~~~~~-----V~~v~fspdg~~l~s~-------- 194 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIAS-------SKVPAIMRIIDPSDLTEKFEIETRGE-----VKDLHFSTDGKVVAYI-------- 194 (365)
T ss_dssp CEEEEEECTTSSCEEEEE-------SCSSCEEEEEETTTTEEEEEEECSSC-----CCEEEECTTSSEEEEE--------
T ss_pred CEEEEEEcCCCCEEEEEE-------CCCCCEEEEeECCCCcEEEEeCCCCc-----eEEEEEccCCceEEec--------
Confidence 456689999999998865 23356899999999877654443332 7789999999999876
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeC-C-C-CcccccccCCCCc
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIG-P-P-AVYTSLDPSPDEK 344 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~-~-~-~~~~~~~~SpDG~ 344 (953)
....+.+++. +|... ... . . ..+..++|||||+
T Consensus 195 ------------------------------------------s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 195 ------------------------------------------TGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp ------------------------------------------CSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred ------------------------------------------cceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 1124556666 55432 222 1 2 5678899999999
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
.++..+.+... ...+++|++.......+...... +....+..++|||||+.|+..
T Consensus 233 ~l~~~s~d~~~---------~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~V~~~~~Spdg~~lasg-------- 287 (365)
T 4h5i_A 233 VLIAASLKKGK---------GIVLTKISIKSGNTSVLRSKQVT--------NRFKGITSMDVDMKGELAVLA-------- 287 (365)
T ss_dssp EEEEEEESSSC---------CEEEEEEEEETTEEEEEEEEEEE--------SSCSCEEEEEECTTSCEEEEE--------
T ss_pred EEEEEecCCcc---------eeEEeecccccceecceeeeeec--------CCCCCeEeEEECCCCCceEEE--------
Confidence 99988755311 12577888875443322111000 111345679999999987766
Q ss_pred cccccccCCeEEEEecCCCCCCCc-eEE-eecccccCCeeeccCCceEEEEEecccCceEEEEEcC
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGP-EIL-HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~-~~l-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~ 488 (953)
+..+.|.+||+ ..++. ..+ ..+...+..++|||||++|+..+.+++. +||.+..
T Consensus 288 -----s~D~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv--rvw~ip~ 343 (365)
T 4h5i_A 288 -----SNDNSIALVKL---KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI--HIIKLPL 343 (365)
T ss_dssp -----ETTSCEEEEET---TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE--EEEECCT
T ss_pred -----cCCCEEEEEEC---CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE--EEEEcCC
Confidence 44568999996 43433 222 3456778899999999999988776643 6776643
No 152
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.66 E-value=1.3e-14 Score=164.00 Aligned_cols=280 Identities=15% Similarity=0.146 Sum_probs=178.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||+.|+..+.+ +.|.|||+.+ + ...+.+.++. .
T Consensus 110 ~V~~~~~~p~~~~l~s~s~D---------------------------------g~i~vwd~~~-~--~~~~~l~~h~--~ 151 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASED---------------------------------ATIKVWDYET-G--DFERTLKGHT--D 151 (410)
T ss_dssp CEEEEEECSSSSEEEEEESS---------------------------------SCEEEEETTT-C--CCCEEECCCS--S
T ss_pred cEEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--cEEEEEeccC--C
Confidence 56678999999999988875 3679999854 2 2233444332 4
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+....|+|||+.|+.... +..|.++|+.+++..+........ +..+.|+|||+.|+...
T Consensus 152 ~V~~v~~~~~~~~l~sgs~---------D~~i~iwd~~~~~~~~~~~~h~~~----V~~v~~~p~~~~l~s~s------- 211 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSA---------DMTIKLWDFQGFECIRTMHGHDHN----VSSVSIMPNGDHIVSAS------- 211 (410)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSCCCEEETTSSCEEECCCCCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCceeEEEcCCCCC----EEEEEEeCCCCEEEEEe-------
Confidence 6889999999998887552 456777788887765443322222 77899999999888661
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEeCCC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDG~~l 346 (953)
..+.|.++|+ +|. ...+... ..+..+.|+|||+.|
T Consensus 212 ------------------------------------------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 212 ------------------------------------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp ------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 2245777888 664 3444444 677889999999999
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEE-------E
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA-------E 418 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~-------~ 418 (953)
+..+.+. .|.+||+..++.. .+..+. ..+..++|+|++....... .
T Consensus 250 ~s~s~D~-------------~v~vwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 250 ASCSNDQ-------------TVRVWVVATKECKAELREHR-------------HVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp EEEETTS-------------CEEEEETTTCCEEEEECCCS-------------SCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred EEEcCCC-------------eEEEEECCCCceeeEecCCC-------------ceEEEEEEcCcccccchhhhccccccc
Confidence 8887443 8999999865443 333221 2345688888753210000 0
Q ss_pred eccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
....+......+..+.|.+||+ .++.....+..+...+..+.|+|+|++|+..+.++ .|.++|..++ +....
T Consensus 304 ~~~~g~~l~sgs~D~~i~iwd~--~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~----~i~vwd~~~~--~~~~~ 375 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDKTIKMWDV--STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK----TLRVWDYKNK--RCMKT 375 (410)
T ss_dssp ----CCEEEEEETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTT----EEEEECCTTS--CCCEE
T ss_pred cCCCCCEEEEEeCCCeEEEEEC--CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--ceEEE
Confidence 0000000011144567999996 23333344556666778899999999998776543 4566666654 22233
Q ss_pred ecCCCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
.......+.. +.|+|+|.+|+....
T Consensus 376 ~~~h~~~v~~------l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 376 LNAHEHFVTS------LDFHKTAPYVVTGSV 400 (410)
T ss_dssp EECCSSCEEE------EEECSSSSCEEEEET
T ss_pred EcCCCCcEEE------EEEcCCCCEEEEEeC
Confidence 3333333443 889999999887763
No 153
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.66 E-value=1.2e-15 Score=170.33 Aligned_cols=186 Identities=16% Similarity=0.114 Sum_probs=129.1
Q ss_pred CCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChh-----------------
Q 002209 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE----------------- 730 (953)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~----------------- 730 (953)
+++|+||++||+... .......+..|+++||+|+++++++. |.+.
T Consensus 96 ~~~P~Vv~~HG~~~~---------------~~~~~~~a~~La~~Gy~V~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~ 157 (383)
T 3d59_A 96 EKYPLVVFSHGLGAF---------------RTLYSAIGIDLASHGFIVAAVEHRDR---SASATYYFKDQSAAEIGDKSW 157 (383)
T ss_dssp SCEEEEEEECCTTCC---------------TTTTHHHHHHHHHTTCEEEEECCCSS---CSSEEEECSSHHHHHHTCCEE
T ss_pred CCCCEEEEcCCCCCC---------------chHHHHHHHHHHhCceEEEEeccCCC---CccceeecCCccccccCCcee
Confidence 369999999996311 01123457789999999999777543 3221
Q ss_pred -------hhh------hhHHHHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEeChHHHHHHHHH
Q 002209 731 -------AND------RFVEQLVACAEAAVEEVVR--------------------RGVAHPSKIAVGGHSYGAFMTANLL 777 (953)
Q Consensus 731 -------~~~------~~~~~~~~D~~~~~~~l~~--------------------~~~~d~~~i~l~G~S~GG~~a~~~a 777 (953)
... ........|+..++++|.+ ...+|.+||+++|||+||.+++.++
T Consensus 158 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 237 (383)
T 3d59_A 158 LYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTL 237 (383)
T ss_dssp EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHH
Confidence 100 1123346899999999876 4557888999999999999999999
Q ss_pred HhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHH
Q 002209 778 AHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (953)
Q Consensus 778 ~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~ 857 (953)
.+.+ +|+++|+++|... +. . .....++++|+|++||++|..+ .. .+..++
T Consensus 238 ~~~~-~v~a~v~~~~~~~----p~----~----------------~~~~~~i~~P~Lii~g~~D~~~----~~-~~~~~~ 287 (383)
T 3d59_A 238 SEDQ-RFRCGIALDAWMF----PL----G----------------DEVYSRIPQPLFFINSEYFQYP----AN-IIKMKK 287 (383)
T ss_dssp HHCT-TCCEEEEESCCCT----TC----C----------------GGGGGSCCSCEEEEEETTTCCH----HH-HHHHHT
T ss_pred hhCC-CccEEEEeCCccC----CC----c----------------hhhhccCCCCEEEEecccccch----hh-HHHHHH
Confidence 8885 6999999887421 00 0 0123567899999999999743 33 233466
Q ss_pred HHhCCCcEEEEEeCCCCccCCC------------------cccH----HHHHHHHHHHHHHhccCC
Q 002209 858 LKGHGALCRLVILPFESHGYAA------------------RESI----MHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 858 l~~~g~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~i~~fl~~~l~~~ 901 (953)
+...+.+++++++++++|.+.. ..+. +.+.+.+++||+++|+..
T Consensus 288 l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 288 CYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp TCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 6667788999999999998621 1112 233357999999999754
No 154
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.66 E-value=8e-16 Score=171.99 Aligned_cols=150 Identities=9% Similarity=0.063 Sum_probs=107.1
Q ss_pred cCCCceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCC-------CCCCCccchHHH
Q 002209 634 LASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSP-------NEFPRIGSTSVL 706 (953)
Q Consensus 634 ~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 706 (953)
...+..+.+++++.+|..+++++++|++. +++.|+||++||+..... .+.+.. ..+......++.
T Consensus 82 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vl~~HG~g~~~~----~~~~~~~~~~~~~~~y~~~~~~~a~ 153 (391)
T 3g8y_A 82 KEGYILEKWEFYPFPKSVSTFLVLKPEHL----KGAVPGVLCIPGSGRTKE----GLVGEPGICDKLTEDYNNPKVSMAL 153 (391)
T ss_dssp ETTEEEEEEEECCSTTCCEEEEEEEETTC----CSCEEEEEEECCTTCCHH----HHTTCCCSSGGGCCCTTSTTTCHHH
T ss_pred cCCEEEEEEEEEcCCCCEEEEEEEeCCCC----CCCCCEEEEeCCCCCCch----hhccccccccccchhhcchHHHHHH
Confidence 34566788999999999999999999763 346999999999632210 010000 000000113567
Q ss_pred HHHHcCcEEEEcCCCCCCCCCChhhh--------h--------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Q 002209 707 LWLARGFAILGGPTTPIIGEGDEEAN--------D--------------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVG 764 (953)
Q Consensus 707 ~la~~G~~V~~~~~~~~~G~G~~~~~--------~--------------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~ 764 (953)
.|+++||+|+++|++ |+|.+... . .+....+.|+.+++++|.+++.+|++||+|+
T Consensus 154 ~la~~G~~Vl~~D~r---g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~ 230 (391)
T 3g8y_A 154 NMVKEGYVAVAVDNA---AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVIS 230 (391)
T ss_dssp HHHTTTCEEEECCCT---TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEE
T ss_pred HHHHCCCEEEEecCC---CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEE
Confidence 899999999996654 55544321 0 1122345899999999999999999999999
Q ss_pred EeChHHHHHHHHHHhCCCcccEEEEcccCCC
Q 002209 765 GHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (953)
Q Consensus 765 G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d 795 (953)
||||||++++.+++.. ++++++|+.+++..
T Consensus 231 G~S~GG~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 231 GFSLGTEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp EEGGGHHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred EEChhHHHHHHHHHcC-CceeEEEEccCCCC
Confidence 9999999999999887 57999998877654
No 155
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.66 E-value=3.9e-15 Score=158.10 Aligned_cols=214 Identities=16% Similarity=0.175 Sum_probs=137.5
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
+.+.+|.+++...+-|++ .|.||++||.+... ..| ......|+++||.|++ +|.
T Consensus 3 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~~--------------~~w-~~~~~~l~~~g~~vi~---~D~ 56 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLSA--------------DDW-DNQMLFFLSHGYRVIA---HDR 56 (275)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCCG--------------GGG-HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEEcCCCC--------CceEEEECCCCCch--------------hhH-HHHHHHHHHCCceEEE---EcC
Confidence 556788888877664421 36799999963211 111 2345568889999999 455
Q ss_pred CCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCcccEEEEcccCCCCCC--
Q 002209 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (953)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~d~~~-- 798 (953)
+|+|.+... ........+|+.++++.+ +.+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 57 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 130 (275)
T 1a88_A 57 RGHGRSDQPSTGHDMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKS 130 (275)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCB
T ss_pred CcCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccC
Confidence 678877532 223566778888877775 235899999999999999877776 899999999886421100
Q ss_pred --CCcCcc----------------------------c-c------cch----hhhh------------HHHHHhcCcccc
Q 002209 799 --TPFGFQ----------------------------N-E------DRT----LWEA------------TSTYVEMSPFMS 825 (953)
Q Consensus 799 --~~~~~~----------------------------~-~------~~~----~~~~------------~~~~~~~sp~~~ 825 (953)
.+.... . . ... .|.. ...+...+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T 1a88_A 131 DTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDD 210 (275)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccc
Confidence 000000 0 0 000 0000 000111122234
Q ss_pred cCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 826 ~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
+.++++|+|+++|++|..+| +....+.+..+. ..+++++++++||... .+..+.+.+.+.+||.
T Consensus 211 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 211 LKRIDVPVLVAHGTDDQVVP--YADAAPKSAELL---ANATLKSYEGLPHGML-STHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCccCC--cHHHHHHHHhhC---CCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhh
Confidence 56789999999999999988 765544443332 2479999999999864 4567788888999985
No 156
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.66 E-value=1.7e-14 Score=159.59 Aligned_cols=289 Identities=10% Similarity=0.069 Sum_probs=166.6
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+..++|||||++||..+... ..--...|++++...+....-...........+..++|+||++.|+.+
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~---~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s------- 112 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLS---SRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS------- 112 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSS---SSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-------
T ss_pred CCEEEEEECCCCCEEEEEcCCC---CccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-------
Confidence 4688999999999998865311 111145788998877654321111100111226789999999877644
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-----eCCC-CcccccccCC
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-----IGPP-AVYTSLDPSP 341 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-----l~~~-~~~~~~~~Sp 341 (953)
..+.|.++|+ +++... .... ..+..++|||
T Consensus 113 -------------------------------------------~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 113 -------------------------------------------DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp -------------------------------------------TTSCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred -------------------------------------------CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 1134555566 553221 1122 6688899999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~ 420 (953)
||++|+..+.+. .|.+||+.++... .+..+. ..+..++|+|+++.++...
T Consensus 150 dg~~l~sgs~dg-------------~v~iwd~~~~~~~~~~~~h~-------------~~v~~v~~s~~~~~~~~s~--- 200 (357)
T 4g56_B 150 DGTQAVSGGKDF-------------SVKVWDLSQKAVLKSYNAHS-------------SEVNCVAACPGKDTIFLSC--- 200 (357)
T ss_dssp SSSEEEEEETTS-------------CEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTCSSCEEEE---
T ss_pred CCCEEEEEeCCC-------------eEEEEECCCCcEEEEEcCCC-------------CCEEEEEEccCCCceeeee---
Confidence 999998877443 8999999866543 333221 3346789999998665541
Q ss_pred cCCCcccccccCCeEEEEecCCCCCCCceEEe--ecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
+..+.|.+||+ .++.....+. .....+..++|+|++..++.....+. .|.++|+.++ +....
T Consensus 201 ---------~~dg~v~~wd~--~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~---~i~~wd~~~~--~~~~~ 264 (357)
T 4g56_B 201 ---------GEDGRILLWDT--RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG---NVSLVNIKNP--DSAQT 264 (357)
T ss_dssp ---------ETTSCEEECCT--TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS---CEEEEESSCG--GGCEE
T ss_pred ---------ccCCceEEEEC--CCCceeeeeeeccccccccchhhhhcccceEEEeeccc---ceeEEECCCC--cEeEE
Confidence 33457889986 2222222222 23344567899999766554443332 4566676664 33333
Q ss_pred ecCCCccccCCCCCCCeEeccCCCE-EEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCccccee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTY-VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYE 577 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~ 577 (953)
.......+.. ++|+|||+. |+....+ ..|++||+.+++..+.....+.
T Consensus 265 ~~~~~~~v~~------l~~sp~~~~~lasgs~D---------------------~~i~iwd~~~~~~~~~~~H~~~---- 313 (357)
T 4g56_B 265 SAVHSQNITG------LAYSYHSSPFLASISED---------------------CTVAVLDADFSEVFRDLSHRDF---- 313 (357)
T ss_dssp ECCCSSCEEE------EEECSSSSCCEEEEETT---------------------SCEEEECTTSCEEEEECCCSSC----
T ss_pred EeccceeEEE------EEEcCCCCCEEEEEeCC---------------------CEEEEEECCCCcEeEECCCCCC----
Confidence 3333333333 789999864 5544421 1399999999887665543322
Q ss_pred eeEeeccCCccccccc-cCCEEEEEEecCCCCceEEEEECCC
Q 002209 578 TTVALMSDQTEGDLYL-NQLKILTSKESKTENTQYYIQSWPD 618 (953)
Q Consensus 578 ~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~p~~l~~~~~~~ 618 (953)
+.. .+|+| |++.|+ +.+.. ..|+++++.+
T Consensus 314 -V~~-------vafsP~d~~~l~-s~s~D---g~v~iW~~~~ 343 (357)
T 4g56_B 314 -VTG-------VAWSPLDHSKFT-TVGWD---HKVLHHHLPS 343 (357)
T ss_dssp -EEE-------EEECSSSTTEEE-EEETT---SCEEEEECC-
T ss_pred -EEE-------EEEeCCCCCEEE-EEcCC---CeEEEEECCC
Confidence 222 46888 666554 44332 3478888754
No 157
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.2e-14 Score=158.97 Aligned_cols=317 Identities=9% Similarity=0.031 Sum_probs=191.3
Q ss_pred eeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEE
Q 002209 179 EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (953)
Q Consensus 179 ~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l 258 (953)
...+.++. ..+...+|||||+.|+.... ...|.++++.+++........... +..++|+|||+.|
T Consensus 25 ~~~l~~h~--~~v~~~~~s~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l 89 (369)
T 3zwl_B 25 AIKLTGHE--RPLTQVKYNKEGDLLFSCSK---------DSSASVWYSLNGERLGTLDGHTGT----IWSIDVDCFTKYC 89 (369)
T ss_dssp EEEEECCS--SCEEEEEECTTSCEEEEEES---------SSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEE
T ss_pred cEEEEEee--ceEEEEEEcCCCCEEEEEeC---------CCEEEEEeCCCchhhhhhhhcCCc----EEEEEEcCCCCEE
Confidence 34444433 46899999999999988552 557888898887765444323222 7789999999998
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-eCCCCcccc
Q 002209 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPPAVYTS 336 (953)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-l~~~~~~~~ 336 (953)
+... ..+.|.++++ +++... +.....+..
T Consensus 90 ~s~~-------------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~v~~ 120 (369)
T 3zwl_B 90 VTGS-------------------------------------------------ADYSIKLWDVSNGQCVATWKSPVPVKR 120 (369)
T ss_dssp EEEE-------------------------------------------------TTTEEEEEETTTCCEEEEEECSSCEEE
T ss_pred EEEe-------------------------------------------------CCCeEEEEECCCCcEEEEeecCCCeEE
Confidence 8661 2246778888 665433 333377889
Q ss_pred cccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccc--cCccceeeccCCCCc
Q 002209 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVR--KGMRSINWRSDKPST 413 (953)
Q Consensus 337 ~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~--~~~~~~~wspDg~~i 413 (953)
+.|+|||+.|+....+. ....+.|.+|++.... ...+....... ........ ..+..++|+|||+.+
T Consensus 121 ~~~~~~~~~l~~~~~~~--------~~~~g~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDNV--------MKNPGSINIYEIERDSATHELTKVSEEP--IHKIITHEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp EEECTTSSEEEEEECCB--------TTBCCEEEEEEEEECTTTCCEEEECSSC--SEEEECCTTCCCEEEEEECGGGCEE
T ss_pred EEEccCCCEEEEecCCc--------cCCCCEEEEEEecCCccceeecccccce--eeeccCCcCccceeEEEEcCCCCEE
Confidence 99999999999887431 0112489999987432 11111100000 00000111 145678999999977
Q ss_pred eEEEEeccCCCcccccccCCeEEEEecCCCCCCC-ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCC
Q 002209 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKD 492 (953)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~ 492 (953)
+.. +..+.|.+||+ .++.. ...+..+...+..+.|+|||+.|+....++ .|+++|+.++
T Consensus 191 ~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~- 250 (369)
T 3zwl_B 191 IAG-------------HKDGKISKYDV--SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDT----NSFLVDVSTL- 250 (369)
T ss_dssp EEE-------------ETTSEEEEEET--TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC-
T ss_pred EEE-------------cCCCEEEEEEC--CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCc----eEEEEECCCC-
Confidence 665 44568999996 22122 233455566778899999999998876443 5777787774
Q ss_pred CCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCc
Q 002209 493 VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDK 572 (953)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~ 572 (953)
+........ ..+.. +.|+|+|++++....+. ...++.... ......+.+||+.+++.........
T Consensus 251 -~~~~~~~~~-~~~~~------~~~~~~~~~l~~~~~~~---~~~~~~~~~----~~~~~~i~~~d~~~~~~~~~~~~~~ 315 (369)
T 3zwl_B 251 -QVLKKYETD-CPLNT------AVITPLKEFIILGGGQE---AKDVTTTSA----NEGKFEARFYHKIFEEEIGRVQGHF 315 (369)
T ss_dssp -CEEEEEECS-SCEEE------EEECSSSSEEEEEECCC--------------------CEEEEEETTTCCEEEEEECCS
T ss_pred -ceeeeecCC-CCcee------EEecCCCceEEEeecCC---CceEEEEec----CCCcceeEEEecCCCcchhheeccc
Confidence 233333211 11222 78999999999886432 122221111 1123468999998887766554332
Q ss_pred ccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002209 573 EKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (953)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g 619 (953)
. .+. ..+|+||++.++..... ..+.++++.++
T Consensus 316 ~----~v~-------~~~~s~~~~~l~s~~~d----g~v~iw~~~~~ 347 (369)
T 3zwl_B 316 G----PLN-------TVAISPQGTSYASGGED----GFIRLHHFEKS 347 (369)
T ss_dssp S----CEE-------EEEECTTSSEEEEEETT----SEEEEEEECHH
T ss_pred C----cEE-------EEEECCCCCEEEEEcCC----CeEEEEECccc
Confidence 1 112 24689999876644332 45888887654
No 158
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.66 E-value=4.4e-14 Score=183.46 Aligned_cols=279 Identities=12% Similarity=0.060 Sum_probs=177.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++||..+.+ +.|.||++.+ + .....+.. +..
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d---------------------------------~~i~vw~~~~-~--~~~~~~~~--h~~ 658 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGAD---------------------------------KTLQVFKAET-G--EKLLDIKA--HED 658 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred cEEEEEECCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--CEEEEecc--CCC
Confidence 46678999999999988765 3679999854 2 22334433 234
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCe--EEEEEecCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNST--LLVCTIPLLRG 267 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~--~l~~~~~~~~~ 267 (953)
.+...+|||||++|+... ....|.++|+.+++........... +..+.|+|++. .++...
T Consensus 659 ~v~~~~~s~~~~~l~s~~---------~d~~v~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~sg~----- 720 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCS---------ADKKVKIWDSATGKLVHTYDEHSEQ----VNCCHFTNKSNHLLLATGS----- 720 (1249)
T ss_dssp CEEEEEECTTSSEEEEEE---------TTSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSCCEEEEEE-----
T ss_pred CEEEEEEecCCCEEEEEe---------CCCeEEEEECCCCceEEEEcCCCCc----EEEEEEecCCCceEEEEEe-----
Confidence 789999999999998865 2567999999988765443333322 77899999654 444330
Q ss_pred CCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCCc
Q 002209 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEK 344 (953)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG~ 344 (953)
..+.|.++|+ +++. ..+... ..+..++|+|||+
T Consensus 721 --------------------------------------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 721 --------------------------------------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp --------------------------------------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT
T ss_pred --------------------------------------------CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC
Confidence 2245778888 6653 344444 7788999999999
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
.|+..+.++ .|.+||+..+.. ..+...................+..++|+|||+.++..
T Consensus 757 ~l~s~s~dg-------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~------- 816 (1249)
T 3sfz_A 757 LLASCSADG-------------TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA------- 816 (1249)
T ss_dssp EEEEEESSS-------------EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE-------
T ss_pred EEEEEECCC-------------eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE-------
Confidence 999887443 899999985543 33322111100000001112245678999999977765
Q ss_pred CcccccccCCeEEEEecCCCCCCCceEEe-ecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g~~~~~l~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 502 (953)
. .+.+.+|++ .++.....+. .+...+..+.|+|+|+.++....++ .+.+++..++ .........
T Consensus 817 ------~-~~~v~~~d~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg----~v~vwd~~~~--~~~~~~~~h 881 (1249)
T 3sfz_A 817 ------A-KNKVLLFDI--HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQY----CVELWNIDSR--LKVADCRGH 881 (1249)
T ss_dssp ------E-TTEEEEEET--TTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSS----CEEEEETTTT--EEEEEECCC
T ss_pred ------c-CCcEEEEEe--cCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCC----eEEEEEcCCC--ceeeecCCC
Confidence 1 457889986 3333333332 4556678899999999988875443 3555565553 223333333
Q ss_pred CccccCCCCCCCeEeccCCCEEEEEee
Q 002209 503 SEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 503 ~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
...+.. +.|+|||++++....
T Consensus 882 ~~~v~~------v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 882 LSWVHG------VMFSPDGSSFLTASD 902 (1249)
T ss_dssp SSCEEE------EEECTTSSEEEEEET
T ss_pred ccceEE------EEECCCCCEEEEEeC
Confidence 333333 789999998887653
No 159
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.65 E-value=3.6e-15 Score=158.51 Aligned_cols=214 Identities=15% Similarity=0.221 Sum_probs=137.6
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
+...+|.+++...+-|+. .|.||++||.+... ..| ......|+++||.|++ +|.
T Consensus 4 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~~-----------~~w----~~~~~~L~~~g~~vi~---~D~ 57 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD--------APVIHFHHGWPLSA-----------DDW----DAQLLFFLAHGYRVVA---HDR 57 (276)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EECCCCcEEEEEecCCCC--------CCeEEEECCCCcch-----------hHH----HHHHHHHHhCCCEEEE---ecC
Confidence 456788888877764421 36799999963211 011 2345668889999999 555
Q ss_pred CCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCcccEEEEcccCCCCCC--
Q 002209 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (953)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~d~~~-- 798 (953)
+|+|.+... ........+|+.++++.+ +.+++.|+||||||.+++.+++.+ |++++++|++++......
T Consensus 58 ~G~G~S~~~~~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 131 (276)
T 1zoi_A 58 RGHGRSSQVWDGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQT 131 (276)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccc
Confidence 788887542 123567778888887776 235799999999999999988877 899999999886421100
Q ss_pred --CCcCcc----------------------------c-c-----c-ch----hhhh-----H-------HHHHhcCcccc
Q 002209 799 --TPFGFQ----------------------------N-E-----D-RT----LWEA-----T-------STYVEMSPFMS 825 (953)
Q Consensus 799 --~~~~~~----------------------------~-~-----~-~~----~~~~-----~-------~~~~~~sp~~~ 825 (953)
.+.... . . . .. .+.. . ..+...+....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (276)
T 1zoi_A 132 PGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTED 211 (276)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHH
T ss_pred ccccccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhh
Confidence 000000 0 0 0 00 0000 0 00011122234
Q ss_pred cCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 826 ~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
+.++++|+|+++|++|..+| +....+.+..+. ...+++++|++||... .++.+.+.+.+.+||.
T Consensus 212 l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 212 LKGIQQPVLVMHGDDDQIVP--YENSGVLSAKLL---PNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEEcCCCcccC--hHHHHHHHHhhC---CCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 56789999999999999988 775444443332 2478999999999864 4567788888888874
No 160
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.65 E-value=4.9e-14 Score=158.69 Aligned_cols=267 Identities=11% Similarity=0.121 Sum_probs=167.7
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc
Q 002209 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (953)
Q Consensus 163 ~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (953)
+.|++|++.+ +....+........+....|+|||+.|+.... ...|.++++.+++...........
T Consensus 113 ~~v~lw~~~~----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~- 178 (401)
T 4aez_A 113 RNVYVWNADS----GSVSALAETDESTYVASVKWSHDGSFLSVGLG---------NGLVDIYDVESQTKLRTMAGHQAR- 178 (401)
T ss_dssp TEEEEEETTT----CCEEEEEECCTTCCEEEEEECTTSSEEEEEET---------TSCEEEEETTTCCEEEEECCCSSC-
T ss_pred CeEEEeeCCC----CcEeEeeecCCCCCEEEEEECCCCCEEEEECC---------CCeEEEEECcCCeEEEEecCCCCc-
Confidence 3689999854 33333332333447899999999999988552 557888898887755443322222
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-
Q 002209 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (953)
Q Consensus 243 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~- 321 (953)
+..+.| +++.|+... ..+.|.++|+
T Consensus 179 ---v~~~~~--~~~~l~~~~-------------------------------------------------~dg~i~i~d~~ 204 (401)
T 4aez_A 179 ---VGCLSW--NRHVLSSGS-------------------------------------------------RSGAIHHHDVR 204 (401)
T ss_dssp ---EEEEEE--ETTEEEEEE-------------------------------------------------TTSEEEEEETT
T ss_pred ---eEEEEE--CCCEEEEEc-------------------------------------------------CCCCEEEEecc
Confidence 667888 456666551 2246777777
Q ss_pred CC--ceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCcccccc
Q 002209 322 DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSV 397 (953)
Q Consensus 322 ~g--~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~ 397 (953)
.+ ....+... ..+..++|+|||+.|+..+.++ .|.+||+..+.. ..+..+.
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-------------~v~iwd~~~~~~~~~~~~~~------------ 259 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN-------------VVQIWDARSSIPKFTKTNHN------------ 259 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTCSSEEEEECCCS------------
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-------------eEEEccCCCCCccEEecCCc------------
Confidence 33 23344444 7788999999999999887443 899999986443 3333221
Q ss_pred ccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecc
Q 002209 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (953)
Q Consensus 398 ~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~ 477 (953)
..+..++|+|+|+.++..... +..+.+.+||+ ..++..........+..+.|+|||+.|+......
T Consensus 260 -~~v~~~~~~p~~~~ll~~~~g----------s~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 260 -AAVKAVAWCPWQSNLLATGGG----------TMDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp -SCCCEEEECTTSTTEEEEECC----------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT
T ss_pred -ceEEEEEECCCCCCEEEEecC----------CCCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC
Confidence 345689999999887775110 13568999996 4444444445556678899999999998875323
Q ss_pred cCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEE
Q 002209 478 TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (953)
Q Consensus 478 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 557 (953)
.+ .+.+++..++..............+.. +.|+|||++|+....+ ..|.+|
T Consensus 326 dg--~i~v~~~~~~~~~~~~~~~~h~~~v~~------~~~s~dg~~l~s~~~d---------------------g~i~iw 376 (401)
T 4aez_A 326 DN--NLSIWSYSSSGLTKQVDIPAHDTRVLY------SALSPDGRILSTAASD---------------------ENLKFW 376 (401)
T ss_dssp TC--EEEEEEEETTEEEEEEEEECCSSCCCE------EEECTTSSEEEEECTT---------------------SEEEEE
T ss_pred CC--cEEEEecCCccceeEEEecCCCCCEEE------EEECCCCCEEEEEeCC---------------------CcEEEE
Confidence 33 344444444211111112223232332 7899999999877532 249999
Q ss_pred ECCCCceE
Q 002209 558 DINTGSKE 565 (953)
Q Consensus 558 d~~~~~~~ 565 (953)
|+.+++..
T Consensus 377 ~~~~~~~~ 384 (401)
T 4aez_A 377 RVYDGDHV 384 (401)
T ss_dssp ECCC----
T ss_pred ECCCCccc
Confidence 99877643
No 161
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.65 E-value=3.1e-15 Score=156.15 Aligned_cols=200 Identities=12% Similarity=0.075 Sum_probs=129.6
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh--hhHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAV 747 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~~~ 747 (953)
.|.||++||..... ..| ......|+++||.|++ .|.+|+|.+.... .......+|+.+++
T Consensus 16 ~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~~GhG~s~~~~~~~~~~~~~~d~~~~~ 77 (247)
T 1tqh_A 16 ERAVLLLHGFTGNS-----------ADV----RMLGRFLESKGYTCHA---PIYKGHGVPPEELVHTGPDDWWQDVMNGY 77 (247)
T ss_dssp SCEEEEECCTTCCT-----------HHH----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCh-----------HHH----HHHHHHHHHCCCEEEe---cccCCCCCCHHHhcCCCHHHHHHHHHHHH
Confidence 36788999953110 011 1344567789999999 5557788664321 13455667888888
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-c--Ccc---c-------ccch-hhhh
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-F--GFQ---N-------EDRT-LWEA 813 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~-~--~~~---~-------~~~~-~~~~ 813 (953)
+++.+.+ .+++.|+||||||.+++.++.++| ++++|+.++........ . .+. . .... ....
T Consensus 78 ~~l~~~~---~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (247)
T 1tqh_A 78 EFLKNKG---YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 152 (247)
T ss_dssp HHHHHHT---CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHcC---CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhh
Confidence 8887654 258999999999999999999997 88888655432210000 0 000 0 0000 0000
Q ss_pred -----------HHHHHh--cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc
Q 002209 814 -----------TSTYVE--MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR 880 (953)
Q Consensus 814 -----------~~~~~~--~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 880 (953)
...+.. .+....+.++++|+|++||++|..+| ++.++++++.++. ..++++++|++||.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 153 MEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIES--PVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCCC--SSEEEEEETTCCSSGGGS
T ss_pred hhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCC--cchHHHHHHhcCC--CceEEEEeCCCceeeccC
Confidence 000000 01223567789999999999999998 8888888777643 247999999999987543
Q ss_pred ccHHHHHHHHHHHHHH
Q 002209 881 ESIMHVLWETDRWLQK 896 (953)
Q Consensus 881 ~~~~~~~~~i~~fl~~ 896 (953)
+..+.+.+.+.+||++
T Consensus 229 ~~~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 229 QEKDQLHEDIYAFLES 244 (247)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh
Confidence 3467888999999976
No 162
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.65 E-value=8.8e-15 Score=167.02 Aligned_cols=223 Identities=12% Similarity=0.046 Sum_probs=147.8
Q ss_pred ceEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEE
Q 002209 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (953)
Q Consensus 638 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~ 717 (953)
+...+.+.+.+|..++.... + ..|+||++||++... ..| ......|+++||.|+.
T Consensus 2 p~i~~~~~~~dG~~l~y~~~---G-------~gp~VV~lHG~~~~~-----------~~~----~~l~~~La~~Gy~Vi~ 56 (456)
T 3vdx_A 2 PFITVGQENSTSIDLYYEDH---G-------TGVPVVLIHGFPLSG-----------HSW----ERQSAALLDAGYRVIT 56 (456)
T ss_dssp CEEEEEEETTEEEEEEEEEE---S-------SSEEEEEECCTTCCG-----------GGG----TTHHHHHHHHTEEEEE
T ss_pred CeEeecccccCCeEEEEEEe---C-------CCCEEEEECCCCCcH-----------HHH----HHHHHHHHHCCcEEEE
Confidence 44556677788888875443 1 258899999964221 112 1345678899999999
Q ss_pred cCCCCCCCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCcccEEEEcccCC
Q 002209 718 GPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAY 794 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~ 794 (953)
+| .+|+|.+... .......++|+.++++++ +.++++|+||||||.+++.+++.+ |++++++|++++..
T Consensus 57 ~D---~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~ 127 (456)
T 3vdx_A 57 YD---RRGFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLE 127 (456)
T ss_dssp EC---CTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCC
T ss_pred EC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcc
Confidence 55 4677777543 224567788888888876 346899999999999998888876 89999999999865
Q ss_pred CCCCCCcCccccc--chh--------------h------------------hhHHHHH---------------------h
Q 002209 795 NRTLTPFGFQNED--RTL--------------W------------------EATSTYV---------------------E 819 (953)
Q Consensus 795 d~~~~~~~~~~~~--~~~--------------~------------------~~~~~~~---------------------~ 819 (953)
............. ... + .....+. .
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (456)
T 3vdx_A 128 PFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWY 207 (456)
T ss_dssp SCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTT
T ss_pred cccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhh
Confidence 4221110000000 000 0 0000000 0
Q ss_pred cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 820 ~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
.+....+.++++|+|+++|++|..+| +....+.+.... ..+++++++++||.+. .+....+.+.+.+||++++.
T Consensus 208 ~d~~~~l~~i~~PvLiI~G~~D~~vp--~~~~~~~l~~~~---~~~~~~~i~gagH~~~-~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 208 TDFRADIPRIDVPALILHGTGDRTLP--IENTARVFHKAL---PSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp CCCTTTSTTCCSCCEEEEETTCSSSC--GGGTHHHHHHHC---TTSEEEEETTCCSCTT-TTTHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhCCCCEEEEEeCCCCCcC--HHHHHHHHHHHC---CCceEEEeCCCCCcch-hhCHHHHHHHHHHHHHHhhc
Confidence 12234467789999999999999998 774444433332 2368999999999864 46788899999999999875
Q ss_pred C
Q 002209 900 S 900 (953)
Q Consensus 900 ~ 900 (953)
.
T Consensus 282 ~ 282 (456)
T 3vdx_A 282 A 282 (456)
T ss_dssp H
T ss_pred c
Confidence 3
No 163
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.65 E-value=4.4e-14 Score=155.36 Aligned_cols=271 Identities=10% Similarity=0.060 Sum_probs=165.0
Q ss_pred CCCCcee-----cC-CCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCC---Cc-e
Q 002209 110 PLPALSF-----SP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL---GQ-E 179 (953)
Q Consensus 110 ~~~~~~~-----SP-DG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~---~~-~ 179 (953)
.+..++| +| ||++|+..+.+ +.|.||++...... +. .
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D---------------------------------~~v~iWd~~~~~~~~~~~~~~ 69 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRD---------------------------------KTVMIWKLYEEEQNGYFGIPH 69 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETT---------------------------------SCEEEEEECSSCCSSBSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCC---------------------------------CEEEEEECCcCCccccccccc
Confidence 3556667 66 99999988875 36789998532111 11 1
Q ss_pred eeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEE
Q 002209 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (953)
Q Consensus 180 ~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~ 259 (953)
..+.++ ...+....|+|||+.|+... ....|.++|+.+++........... +..++|+|||+.|+
T Consensus 70 ~~l~~h--~~~V~~~~~~~~~~~l~s~s---------~D~~v~lwd~~~~~~~~~~~~h~~~----v~~v~~sp~~~~l~ 134 (343)
T 2xzm_R 70 KALTGH--NHFVSDLALSQENCFAISSS---------WDKTLRLWDLRTGTTYKRFVGHQSE----VYSVAFSPDNRQIL 134 (343)
T ss_dssp EEECCC--SSCEEEEEECSSTTEEEEEE---------TTSEEEEEETTSSCEEEEEECCCSC----EEEEEECSSTTEEE
T ss_pred chhccC--CCceEEEEECCCCCEEEEEc---------CCCcEEEEECCCCcEEEEEcCCCCc----EEEEEECCCCCEEE
Confidence 223332 23688899999999888754 2568888999887754333222222 77899999999988
Q ss_pred EEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeC---CC-Ccc
Q 002209 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG---PP-AVY 334 (953)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~---~~-~~~ 334 (953)
... ..+.|.++|+ ......+. .. ..+
T Consensus 135 s~~-------------------------------------------------~d~~i~~wd~~~~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 135 SAG-------------------------------------------------AEREIKLWNILGECKFSSAEKENHSDWV 165 (343)
T ss_dssp EEE-------------------------------------------------TTSCEEEEESSSCEEEECCTTTSCSSCE
T ss_pred EEc-------------------------------------------------CCCEEEEEeccCCceeeeecccCCCcee
Confidence 661 1234556666 33222222 12 556
Q ss_pred cccccCCCC----------cEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccce
Q 002209 335 TSLDPSPDE----------KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSI 404 (953)
Q Consensus 335 ~~~~~SpDG----------~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~ 404 (953)
..++|+|++ .+|+..+.+ +.|.+||..+.....+..+. ..+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~h~-------------~~v~~~ 219 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWD-------------GRLKVWNTNFQIRYTFKAHE-------------SNVNHL 219 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETT-------------SEEEEEETTTEEEEEEECCS-------------SCEEEE
T ss_pred eeeeeccccccccccCCCCCEEEEEcCC-------------CEEEEEcCCCceeEEEcCcc-------------ccceEE
Confidence 778889887 566666533 48999996654444443322 345679
Q ss_pred eeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEE
Q 002209 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTW 484 (953)
Q Consensus 405 ~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~ 484 (953)
+|+|||+.|+.. +..+.|.+||+ ...............+..++|+||++.|+... ++. .++|
T Consensus 220 ~~s~~g~~l~sg-------------s~dg~v~iwd~--~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~--v~iw 281 (343)
T 2xzm_R 220 SISPNGKYIATG-------------GKDKKLLIWDI--LNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQG--VKIF 281 (343)
T ss_dssp EECTTSSEEEEE-------------ETTCEEEEEES--SCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSC--EEEE
T ss_pred EECCCCCEEEEE-------------cCCCeEEEEEC--CCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCC--EEEE
Confidence 999999977665 45668999996 23333333333344577899999998776543 321 3555
Q ss_pred EEcCCCCCCCcE-EeecC----------CCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 485 VISPGSKDVAPR-ILFDR----------SSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 485 ~~d~~~~~~~~~-~~~~~----------~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
++.++..... .+... ....+.. ++|+|||++|+....
T Consensus 282 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~sp~g~~l~sg~~ 329 (343)
T 2xzm_R 282 --NLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTS------LAWNALGKKLFAGFT 329 (343)
T ss_dssp --ESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEE------EEECSSSCCEEEEET
T ss_pred --EeCCCCCCceEEeecCcchhhhhhcCCCCceEE------EEECCCCCeEEEecC
Confidence 4444321111 11100 1111111 789999999988763
No 164
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.64 E-value=9e-16 Score=172.77 Aligned_cols=234 Identities=13% Similarity=0.110 Sum_probs=153.6
Q ss_pred EEcCCCcEEEEEEEcCCCC-CCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH----HcCc---EE
Q 002209 644 YQRKDGVQLSATLYLPPGY-DPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL----ARGF---AI 715 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~-~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la----~~G~---~V 715 (953)
+...||..+.+..+.|.+. .+...++.|+||++||.+.... .|. .....|+ ..|| .|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-----------~~~----~~~~~L~~~~~~~G~~~~~v 89 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-----------VWE----YYLPRLVAADAEGNYAIDKV 89 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-----------GGG----GGGGGSCCCBTTTTEEEEEE
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-----------HHH----HHHHHHHHhhhhcCcceeEE
Confidence 4567999999999988641 0111234689999999642211 111 2233455 3489 99
Q ss_pred EEcCCCCCCCCCChhhh-------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEE
Q 002209 716 LGGPTTPIIGEGDEEAN-------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGI 788 (953)
Q Consensus 716 ~~~~~~~~~G~G~~~~~-------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v 788 (953)
++ ++.+|+|.+... .......+.|+.++++.+.....+++.++.|+||||||.+++.++.++|++++++|
T Consensus 90 i~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 166 (398)
T 2y6u_A 90 LL---IDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLI 166 (398)
T ss_dssp EE---ECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEE
T ss_pred EE---EcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEE
Confidence 99 455688887543 12355667788777776532112344569999999999999999999999999999
Q ss_pred EcccCCCCCC--------CCcC---cc------------c--cc----------chhh-----hhHHHHHh---------
Q 002209 789 ARSGAYNRTL--------TPFG---FQ------------N--ED----------RTLW-----EATSTYVE--------- 819 (953)
Q Consensus 789 ~~~~~~d~~~--------~~~~---~~------------~--~~----------~~~~-----~~~~~~~~--------- 819 (953)
+++|...... .... .. . .. ...+ +..+.+..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T 2y6u_A 167 LIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGD 246 (398)
T ss_dssp EESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC----
T ss_pred EeccccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCcccccc
Confidence 9998765311 0000 00 0 00 0000 00011110
Q ss_pred ---------------------------cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC
Q 002209 820 ---------------------------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (953)
Q Consensus 820 ---------------------------~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 872 (953)
......+.++++|+|+++|++|..+| +..+.++++.+. .++++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~--~~~~~~l~~~~~----~~~~~~~~~ 320 (398)
T 2y6u_A 247 DEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCP--PQNQLFLQKTLQ----NYHLDVIPG 320 (398)
T ss_dssp ----CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEETT
T ss_pred ccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCC--HHHHHHHHHhCC----CceEEEeCC
Confidence 00123456789999999999999998 888888777664 468999999
Q ss_pred CCccCCCcccHHHHHHHHHHHHHHhccCCC
Q 002209 873 ESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 873 ~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (953)
+||... .+....+.+.+.+||.+++....
T Consensus 321 ~gH~~~-~e~p~~~~~~i~~fl~~~~~~~~ 349 (398)
T 2y6u_A 321 GSHLVN-VEAPDLVIERINHHIHEFVLTSP 349 (398)
T ss_dssp CCTTHH-HHSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccch-hcCHHHHHHHHHHHHHHHHHhHH
Confidence 999763 45677889999999999986543
No 165
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.64 E-value=8.8e-15 Score=159.25 Aligned_cols=233 Identities=11% Similarity=0.080 Sum_probs=159.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|+|++..++..+.+ +.|.+||+.+ + ...+.+... ..
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D---------------------------------~~i~lWd~~~-~--~~~~~~~~~--~~ 123 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLD---------------------------------AHIRLWDLEN-G--KQIKSIDAG--PV 123 (321)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEECC--TT
T ss_pred CEEEEEECCCCCEEEEEeCC---------------------------------CcEEEEECCC-C--CEEEEEeCC--Cc
Confidence 45677899999998888765 3689999853 2 122333322 23
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+....|||||+.|+... ....|.++++++++........... +..++|+|||+.|+...
T Consensus 124 ~~~~~~~spdg~~l~~g~---------~dg~v~i~~~~~~~~~~~~~~~~~~----v~~~~~spdg~~lasg~------- 183 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGT---------HVGKVNIFGVESGKKEYSLDTRGKF----ILSIAYSPDGKYLASGA------- 183 (321)
T ss_dssp CCCCEEECTTSSEEEEEC---------TTSEEEEEETTTCSEEEEEECSSSC----EEEEEECTTSSEEEEEE-------
T ss_pred cEEEEEECCCCCEEEEEc---------CCCcEEEEEcCCCceeEEecCCCce----EEEEEECCCCCEEEEEc-------
Confidence 577899999999998844 3567888999887654333222222 66899999999998761
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDG~~l 346 (953)
..+.|.++|+ +++.. .+... ..+..++|||||++|
T Consensus 184 ------------------------------------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l 221 (321)
T 3ow8_A 184 ------------------------------------------IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 221 (321)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEE
Confidence 2245778888 77543 44444 678899999999999
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
+..+.+. .|.+||+..+. ...+..+. ..+..++|+|||+.++..
T Consensus 222 ~s~s~dg-------------~i~iwd~~~~~~~~~~~~h~-------------~~v~~~~~sp~~~~l~s~--------- 266 (321)
T 3ow8_A 222 VTASDDG-------------YIKIYDVQHANLAGTLSGHA-------------SWVLNVAFCPDDTHFVSS--------- 266 (321)
T ss_dssp EEECTTS-------------CEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSEEEEE---------
T ss_pred EEEcCCC-------------eEEEEECCCcceeEEEcCCC-------------CceEEEEECCCCCEEEEE---------
Confidence 8877443 89999998544 33333322 334679999999976655
Q ss_pred ccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEE
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWV 485 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~ 485 (953)
+..+.|.+||+ .++.....+..+...+..++|+|||+.|+..+.++. .+||.
T Consensus 267 ----s~D~~v~iwd~--~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~--i~vwd 318 (321)
T 3ow8_A 267 ----SSDKSVKVWDV--GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE--IHIYD 318 (321)
T ss_dssp ----ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCC--EEEEE
T ss_pred ----eCCCcEEEEeC--CCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCe--EEEEe
Confidence 44567899996 222223344556667788999999999987765442 35554
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.64 E-value=5.2e-14 Score=155.96 Aligned_cols=282 Identities=14% Similarity=0.135 Sum_probs=158.2
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~ 243 (953)
.|++|.+.... ++.+.+... .......++|||||++|++....+ ..++...+|.++.++|+.+.+.......
T Consensus 28 ~i~~~~~d~~~--g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~---~~~~~v~~~~~~~~~g~~~~~~~~~~~~-- 99 (361)
T 3scy_A 28 GIYTFRFNEET--GESLPLSDA-EVANPSYLIPSADGKFVYSVNEFS---KDQAAVSAFAFDKEKGTLHLLNTQKTMG-- 99 (361)
T ss_dssp EEEEEEEETTT--CCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCS---STTCEEEEEEEETTTTEEEEEEEEECSS--
T ss_pred CEEEEEEeCCC--CCEEEeecc-cCCCCceEEECCCCCEEEEEEccC---CCCCcEEEEEEeCCCCcEEEeeEeccCC--
Confidence 57777773221 444444433 334677789999999998876421 1234556677887767776664432111
Q ss_pred ccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc--
Q 002209 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-- 321 (953)
Q Consensus 244 ~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-- 321 (953)
.....+++ ||+.|+++.. ..+.+.++++
T Consensus 100 ~~p~~~~~--dg~~l~~~~~------------------------------------------------~~~~v~~~~~~~ 129 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANY------------------------------------------------SGGSITVFPIGQ 129 (361)
T ss_dssp SCEEEEEE--CSSEEEEEET------------------------------------------------TTTEEEEEEBCT
T ss_pred CCcEEEEE--CCCEEEEEEC------------------------------------------------CCCEEEEEEeCC
Confidence 00223444 8888887610 1234555665
Q ss_pred CCceeEeC-----CC----------CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-------EE
Q 002209 322 DGTVKEIG-----PP----------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-------VR 379 (953)
Q Consensus 322 ~g~~~~l~-----~~----------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-------~~ 379 (953)
+|....+. .. .....++|||||++|+++... ...+++|+++... ..
T Consensus 130 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~------------~~~v~v~~~~~~~~~~~~~~l~ 197 (361)
T 3scy_A 130 DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG------------TDQIHKFNINPNANADNKEKFL 197 (361)
T ss_dssp TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTCCTTTCCCCE
T ss_pred CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC------------CCEEEEEEEcCCCCccccccee
Confidence 33332221 00 122458999999999887632 2378888887322 21
Q ss_pred ------EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee
Q 002209 380 ------ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK 453 (953)
Q Consensus 380 ------~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~ 453 (953)
.+.... ..+++.++|||||+.+++. . ...+.|.++++ ++++.+.+..
T Consensus 198 ~~~~~~~~~~~~------------~~~~~~~~~spdg~~l~v~-~-----------~~~~~v~v~~~---~~g~~~~~~~ 250 (361)
T 3scy_A 198 TKGTPEAFKVAP------------GSGPRHLIFNSDGKFAYLI-N-----------EIGGTVIAFRY---ADGMLDEIQT 250 (361)
T ss_dssp EEEEEEEEECCT------------TCCEEEEEECTTSSEEEEE-E-----------TTTCEEEEEEE---ETTEEEEEEE
T ss_pred ecccccceecCC------------CCCCeEEEEcCCCCEEEEE-c-----------CCCCeEEEEEe---cCCceEEeEE
Confidence 111110 1345679999999866554 1 12457888886 3444433322
Q ss_pred cc------cccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCc-cccCCCCCCCeEeccCCCEEEE
Q 002209 454 LD------LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSE-DVYSDPGSPMMRRTSTGTYVIA 526 (953)
Q Consensus 454 ~~------~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~SpDG~~l~~ 526 (953)
.. .....++|||||++|+++.........+|.++..++ +...+...... .... ++|||||++|+.
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~g~~~~~------~~~spdg~~l~~ 322 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLTGIHPRN------FIITPNGKYLLV 322 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEECSSCCCE------EEECTTSCEEEE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecCCCCCce------EEECCCCCEEEE
Confidence 11 112368999999998776544133346777775554 32222211111 1111 789999999887
Q ss_pred EeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEe
Q 002209 527 KIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (953)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~ 568 (953)
..... +.-.+|.+|.++|+.+.+.
T Consensus 323 ~~~~~------------------~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 323 ACRDT------------------NVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EETTT------------------TEEEEEEECTTTCCEEECS
T ss_pred EECCC------------------CCEEEEEEECCCCcEeecc
Confidence 75211 1234666788888877653
No 167
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.64 E-value=1.8e-14 Score=158.71 Aligned_cols=284 Identities=12% Similarity=0.046 Sum_probs=154.1
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~ 243 (953)
.|++|.+... .+....+...........++|||||+ |+++... .+...|+++++++|+.+.+...... .
T Consensus 17 ~i~v~~~d~~--tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~------~~~~~v~~~~~~~g~~~~~~~~~~~--~ 85 (347)
T 3hfq_A 17 GIYQGTLDTT--AKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE------DDEGGIAAWQIDGQTAHKLNTVVAP--G 85 (347)
T ss_dssp EEEEEEEETT--TTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE------TTEEEEEEEEEETTEEEEEEEEEEE--S
T ss_pred CEEEEEEcCC--CCeEEEeeeeeccCCcceEEEccCCe-EEEEEec------CCCceEEEEEecCCcEEEeeeeecC--C
Confidence 4566665321 14433333222234577899999999 7665531 2356899999888876655431110 0
Q ss_pred ccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc--
Q 002209 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-- 321 (953)
Q Consensus 244 ~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-- 321 (953)
.....++|+|||+.|+++.. ....+.++++
T Consensus 86 ~~p~~~a~spdg~~l~~~~~------------------------------------------------~~~~v~v~~~~~ 117 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANY------------------------------------------------HKGTAEVMKIAA 117 (347)
T ss_dssp CCCSEEEEETTTTEEEEEET------------------------------------------------TTTEEEEEEECT
T ss_pred CCCEEEEECCCCCEEEEEeC------------------------------------------------CCCEEEEEEeCC
Confidence 01457899999999987711 1123344444
Q ss_pred CCceeEeCC---C----------CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc-CceEEEeccCCCc
Q 002209 322 DGTVKEIGP---P----------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLA 387 (953)
Q Consensus 322 ~g~~~~l~~---~----------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~-g~~~~~l~~~~~~ 387 (953)
+|..+.+.. . ..+..++|||||+ ++++... .+.|++|+++ ++....+......
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~ 184 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG------------SDKVYVYNVSDAGQLSEQSVLTME 184 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT------------TTEEEEEEECTTSCEEEEEEEECC
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC------------CCEEEEEEECCCCcEEEeeeEEcC
Confidence 444333211 1 1245689999999 5554421 2379999998 5544433321110
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee---cc------ccc
Q 002209 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK---LD------LRY 458 (953)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~---~~------~~~ 458 (953)
. ..+++.++|+|||+.+++. . ...+.+.+++++ ..+++.+.+.. .. ...
T Consensus 185 ~---------g~~p~~~~~spdg~~l~v~-~-----------~~~~~v~v~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 185 A---------GFGPRHLVFSPDGQYAFLA-G-----------ELSSQIASLKYD-TQTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp T---------TCCEEEEEECTTSSEEEEE-E-----------TTTTEEEEEEEE-TTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred C---------CCCCceEEECCCCCEEEEE-e-----------CCCCEEEEEEec-CCCCceEEeeeeeecCCCCCCCCcc
Confidence 0 0234578999999866554 1 123466666651 12233332221 11 124
Q ss_pred CCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCC--ccccCCCCCCCeEeccCCCEEEEEeeeccCCCc
Q 002209 459 GGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS--EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGT 536 (953)
Q Consensus 459 ~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~ 536 (953)
..++|||||++|+++...+ ....+|.++.++ ....+..... .... .++|||||++|+....+.
T Consensus 243 ~~i~~spdG~~l~v~~~~~-~~v~v~~~~~~g---~~~~~~~~~~~~~~~~------~~~~spdg~~l~v~~~~~----- 307 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGY-NTLAVFAVTADG---HLTLIQQISTEGDFPR------DFDLDPTEAFVVVVNQNT----- 307 (347)
T ss_dssp EEEEECTTSCEEEEEEETT-TEEEEEEECGGG---CEEEEEEEECSSSCCC------EEEECTTSSEEEEEETTT-----
T ss_pred eeEEECCCCCEEEEEeCCC-CEEEEEEECCCC---cEEEeEEEecCCCCcC------eEEECCCCCEEEEEEcCC-----
Confidence 4589999999987765433 223455544322 2222221111 1111 178999999988775321
Q ss_pred EEEEecCCCCCCCCCCeEEEEECCCCceEEEec
Q 002209 537 YILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 537 ~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~ 569 (953)
+.-.+|.+|.++|+.+.+..
T Consensus 308 -------------~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 308 -------------DNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp -------------TEEEEEEECTTTCCEEEEEE
T ss_pred -------------CcEEEEEEeCCCCeEEeccc
Confidence 11234445777888776643
No 168
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.64 E-value=2e-15 Score=156.30 Aligned_cols=129 Identities=15% Similarity=0.139 Sum_probs=99.9
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCc
Q 002209 743 AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSP 822 (953)
Q Consensus 743 ~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp 822 (953)
+...++...+ ..+|++||+++|+|+||++++.++.++|+.|+++|+++|..... ..+ ..
T Consensus 117 i~~li~~~~~-~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~-----------------~~~---~~ 175 (246)
T 4f21_A 117 VNKLIDSQVN-QGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAW-----------------DNF---KG 175 (246)
T ss_dssp HHHHHHHHHH-C-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTH-----------------HHH---ST
T ss_pred HHHHHHHHHH-cCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcc-----------------ccc---cc
Confidence 3333333333 35899999999999999999999999999999999999853210 000 00
Q ss_pred ccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 823 FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 823 ~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
.......++|+|++||+.|.+|| ++.++++++.|++.|.++++..||++||.+. .+.++.+.+||++.|+
T Consensus 176 ~~~~~~~~~Pvl~~HG~~D~vVp--~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 176 KITSINKGLPILVCHGTDDQVLP--EVLGHDLSDKLKVSGFANEYKHYVGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp TCCGGGTTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEESSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred cccccccCCchhhcccCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 00111235799999999999999 9999999999999999999999999999875 3446789999999875
No 169
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.64 E-value=6.1e-14 Score=153.31 Aligned_cols=289 Identities=11% Similarity=-0.008 Sum_probs=168.2
Q ss_pred eceEEEEccCCCCCCce-eeeecCCCCC-cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCc
Q 002209 163 TGIGIHQLFPDGKLGQE-IEIQGFPDGA-KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI 240 (953)
Q Consensus 163 ~~i~i~~~~~~g~~~~~-~~l~~~~~~~-~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 240 (953)
+.|++||+.+ ++. ..+. +.... .+..++|||||++|+++.. ....|+++|+.+++.......+..
T Consensus 11 ~~v~~~d~~~----~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 11 DKLVVIDTEK----MAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVN--------KSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp TEEEEEETTT----TEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEET--------TTTEEEEEETTTCCEEEEEECCBT
T ss_pred CeEEEEECCC----CcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeC--------CCCeEEEEECCCCCeEeeEEcCCc
Confidence 3689999843 332 2222 22211 3788999999999887652 246899999998876543322210
Q ss_pred c-ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 241 Y-LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 241 ~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
. ....+..++|+|||+.|+++....... ..... .....|+++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~-------------------------------~~~~~------~~~~~i~v~ 120 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLE-------------------------------LTHFE------VQPTRVALY 120 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEEC-------------------------------SSCEE------ECCCEEEEE
T ss_pred ccccccccceEECCCCCEEEEEecccccc-------------------------------ccccc------ccCceEEEE
Confidence 0 000155889999999988772100000 00000 013578899
Q ss_pred Ec-CCceeE-eCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCcccccc
Q 002209 320 SL-DGTVKE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSV 397 (953)
Q Consensus 320 ~~-~g~~~~-l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~ 397 (953)
|+ +++... +..+..+..++|||||++|++.. +.|++||+++++.........
T Consensus 121 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~~~~~----------- 174 (337)
T 1pby_B 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQS----------- 174 (337)
T ss_dssp ETTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECSTT-----------
T ss_pred ECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeeeeccc-----------
Confidence 99 775543 33335677889999999998872 279999998766543222111
Q ss_pred ccCccceeeccCCCCceEEE------------EeccCCCcccccccCCeEEEEecCCCCCCCceEEe--ecccccCCeee
Q 002209 398 RKGMRSINWRSDKPSTLYWA------------ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISW 463 (953)
Q Consensus 398 ~~~~~~~~wspDg~~i~~~~------------~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~--~~~~~~~~~~~ 463 (953)
....+.|+|||+.+++.. ....++.... ......++++|+ .+++...+. ........++|
T Consensus 175 --~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T 1pby_B 175 --WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP-TAYRTGLLTMDL---ETGEMAMREVRIMDVFYFSTAV 248 (337)
T ss_dssp --TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG-GGEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEE
T ss_pred --cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc-cccccceEEEeC---CCCCceEeecCCCCCceeeEEE
Confidence 012347999998765431 0000000000 011126788986 445544332 22233456899
Q ss_pred ccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecC
Q 002209 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (953)
Q Consensus 464 SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~ 543 (953)
+|||++|++. . ..|+++|+.++ +........ ..... +.|+|||++|+....
T Consensus 249 s~dg~~l~~~-~-----~~v~~~d~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~-------------- 299 (337)
T 1pby_B 249 NPAKTRAFGA-Y-----NVLESFDLEKN--ASIKRVPLP-HSYYS------VNVSTDGSTVWLGGA-------------- 299 (337)
T ss_dssp CTTSSEEEEE-E-----SEEEEEETTTT--EEEEEEECS-SCCCE------EEECTTSCEEEEESB--------------
T ss_pred CCCCCEEEEe-C-----CeEEEEECCCC--cCcceecCC-Cceee------EEECCCCCEEEEEcC--------------
Confidence 9999998877 1 27899998875 222222211 11111 789999998877531
Q ss_pred CCCCCCCCCeEEEEECCCCceEEEec
Q 002209 544 GATPEGNIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 544 ~~~~~~~~~~L~~~d~~~~~~~~l~~ 569 (953)
...|++||+.+++......
T Consensus 300 -------~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 300 -------LGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp -------SSEEEEEETTTCCEEEEEE
T ss_pred -------CCcEEEEECcCCcEEEEEE
Confidence 1249999999887665443
No 170
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.64 E-value=4.9e-14 Score=160.38 Aligned_cols=258 Identities=10% Similarity=0.082 Sum_probs=164.0
Q ss_pred ceEEEEccCCCCCCceeeee---cC-CCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCC
Q 002209 164 GIGIHQLFPDGKLGQEIEIQ---GF-PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD 239 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~---~~-~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~ 239 (953)
.|++||+.+ ++..... .+ .....+....|+|||+.++... ....|+++|+++++.........
T Consensus 145 ~i~~~d~~~----g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~---------~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 145 GMDVLDINS----GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM---------QANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SEEEEETTT----CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG---------GGTEEEEEETTTCCEEEEEECSS
T ss_pred eEEEEECCC----CeEeeecCcccccccCCceeEEEEcCCCEEEEEEC---------CCCEEEEEECCCceEEEEEcCCC
Confidence 579999853 2222211 01 1122577789999997665532 35689999999877654333222
Q ss_pred ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 240 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
.. +..++|+|||+.++++.. ..+.|+++
T Consensus 212 ~~----~~~~~~~~~~~~l~~~~~------------------------------------------------~~~~i~~~ 239 (433)
T 3bws_A 212 KW----SKILLYDPIRDLVYCSNW------------------------------------------------ISEDISVI 239 (433)
T ss_dssp SS----EEEEEEETTTTEEEEEET------------------------------------------------TTTEEEEE
T ss_pred CC----eeEEEEcCCCCEEEEEec------------------------------------------------CCCcEEEE
Confidence 22 668999999998876610 22468889
Q ss_pred Ec-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCcccccc
Q 002209 320 SL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSV 397 (953)
Q Consensus 320 ~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~ 397 (953)
|+ +++....... ..+..++|+|||++|++.......- ....+.|++||+.+++.......+
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-----~~~dg~i~~~d~~~~~~~~~~~~~------------ 302 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQ-----ESGGGRLGIYSMDKEKLIDTIGPP------------ 302 (433)
T ss_dssp ETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTT-----CSCCEEEEEEETTTTEEEEEEEEE------------
T ss_pred ECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcc-----ccCCCeEEEEECCCCcEEeeccCC------------
Confidence 98 7765544443 6678899999999998887432100 001348999999866554433211
Q ss_pred ccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecc
Q 002209 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (953)
Q Consensus 398 ~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~ 477 (953)
..+..++|+|||+.+++.. ...+.+++|++ .+++..........+..++|+|||+.|++.....
T Consensus 303 -~~~~~~~~~~~g~~l~~~~------------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 303 -GNKRHIVSGNTENKIYVSD------------MCCSKIEVYDL---KEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp -ECEEEEEECSSTTEEEEEE------------TTTTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEEEEEECCC
T ss_pred -CCcceEEECCCCCEEEEEe------------cCCCEEEEEEC---CCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCC
Confidence 2345789999998766551 33568999996 4444433334455567899999999988876542
Q ss_pred cC-----------ceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 478 TR-----------RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 478 ~~-----------~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
.. ...|+++|+.++ +........ ..+.. +.|+|||++|+...
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTD--TVKEFWEAG-NQPTG------LDVSPDNRYLVISD 419 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTT--EEEEEEECS-SSEEE------EEECTTSCEEEEEE
T ss_pred CccccccccccccceEEEEEECCCC--cEEEEecCC-CCCce------EEEcCCCCEEEEEE
Confidence 11 127899998775 333333221 11222 78999999998765
No 171
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.64 E-value=7.1e-15 Score=155.85 Aligned_cols=212 Identities=16% Similarity=0.181 Sum_probs=134.7
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
+++.+|.+++...+- . .|.||++||.+... ..| ......|+++||.|++ +|.
T Consensus 3 ~~~~~g~~l~y~~~g--------~--~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~ 54 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG--------S--GQPIVFSHGWPLNA-----------DSW----ESQMIFLAAQGYRVIA---HDR 54 (273)
T ss_dssp EECTTSCEEEEEEES--------C--SSEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EecCCCcEEEEEEcC--------C--CCEEEEECCCCCcH-----------HHH----hhHHhhHhhCCcEEEE---ECC
Confidence 566788888755441 1 36799999963211 011 2345578889999999 455
Q ss_pred CCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCcccEEEEcccCCCCCC--
Q 002209 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (953)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~d~~~-- 798 (953)
+|+|.+... ........+|+.++++.+ +.+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (273)
T 1a8s_A 55 RGHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128 (273)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccC
Confidence 678877532 123566777877777664 346899999999999999877665 899999999876421100
Q ss_pred --CCcCcc----------------------------c-c-----c-ch----hhhh------------HHHHHhcCcccc
Q 002209 799 --TPFGFQ----------------------------N-E-----D-RT----LWEA------------TSTYVEMSPFMS 825 (953)
Q Consensus 799 --~~~~~~----------------------------~-~-----~-~~----~~~~------------~~~~~~~sp~~~ 825 (953)
...... . . . .. .|.. ...+...+....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (273)
T 1a8s_A 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTED 208 (273)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhh
Confidence 000000 0 0 0 00 0000 000111122334
Q ss_pred cCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 826 ~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
+.++++|+|+++|++|..+| +....+.+..+.. ..++++++++||... .+..+.+.+.+.+||.
T Consensus 209 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 209 LKKIDVPTLVVHGDADQVVP--IEASGIASAALVK---GSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHTCCSCEEEEEETTCSSSC--STTTHHHHHHHST---TCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEECCCCccCC--hHHHHHHHHHhCC---CcEEEEeCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 56789999999999999998 7755444443322 358999999999863 4567788888999985
No 172
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.64 E-value=2.9e-15 Score=159.57 Aligned_cols=235 Identities=13% Similarity=0.098 Sum_probs=147.8
Q ss_pred ceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEE
Q 002209 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (953)
Q Consensus 638 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~ 716 (953)
..+.+++.+. .|.++..+ +|+.+ + |+|+++||.... .....|.... .....++++||+|+
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~------~-~~v~llHG~~~~---------~~~~~w~~~~-~~~~~l~~~~~~vv 65 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG------P-HAVYLLDGLRAQ---------DDYNGWDINT-PAFEEYYQSGLSVI 65 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS------S-SEEEECCCTTCC---------SSSCHHHHHS-CHHHHHTTSSSEEE
T ss_pred eEEEEEEECcccCceeEEE--EcCCC------C-CEEEEECCCCCC---------CCcccccccC-cHHHHHhcCCeEEE
Confidence 4566677654 45666655 45443 1 489999996310 0001111000 11234667899999
Q ss_pred EcCCCCCCCCCChhh---------hhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEE
Q 002209 717 GGPTTPIIGEGDEEA---------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (953)
Q Consensus 717 ~~~~~~~~G~G~~~~---------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (953)
.++..+..++..... ...+.....+|+... +.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 66 ~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 142 (280)
T 1dqz_A 66 MPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAW---LQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYA 142 (280)
T ss_dssp EECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHH---HHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEE
T ss_pred EECCCCCccccCCCCCCccccccccccHHHHHHHHHHHH---HHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEE
Confidence 988754333321100 112222223444444 43433466779999999999999999999999999999
Q ss_pred EEcccCCCCCCCCcC-cc-----cc----cchhhh--hHHHHHhcCcccccCCC---CCcEEEEEeCCCC----------
Q 002209 788 IARSGAYNRTLTPFG-FQ-----NE----DRTLWE--ATSTYVEMSPFMSANKL---KKPILLVHGEEDN---------- 842 (953)
Q Consensus 788 v~~~~~~d~~~~~~~-~~-----~~----~~~~~~--~~~~~~~~sp~~~~~~i---~~P~Li~~G~~D~---------- 842 (953)
|+++|.++....... +. .. ....|. ....+...+|..++.++ ..|+++.||+.|.
T Consensus 143 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~ 222 (280)
T 1dqz_A 143 ASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPA 222 (280)
T ss_dssp EEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHH
T ss_pred EEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccch
Confidence 999998764321000 00 00 000111 11345666777666555 5899999999997
Q ss_pred ----CCCCchHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 843 ----NSGTLTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 843 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
.++ ..++++++++|++.| +++++.++++++|.+. .+...+...+.||.+.|+
T Consensus 223 ~~~e~~~--~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 223 KFLEGLT--LRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHHhC
Confidence 456 888999999999999 9999999988899762 344556677888877663
No 173
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.63 E-value=1.1e-15 Score=154.15 Aligned_cols=183 Identities=12% Similarity=0.070 Sum_probs=110.8
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc--CcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR--GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~--G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~ 747 (953)
-|+|||+||.. ++++.+ .......++.++ ||.|+++|. .|+|.+ ..++ +
T Consensus 2 mptIl~lHGf~-----------ss~~s~--k~~~l~~~~~~~~~~~~v~~pdl---~~~g~~---------~~~~----l 52 (202)
T 4fle_A 2 MSTLLYIHGFN-----------SSPSSA--KATTFKSWLQQHHPHIEMQIPQL---PPYPAE---------AAEM----L 52 (202)
T ss_dssp -CEEEEECCTT-----------CCTTCH--HHHHHHHHHHHHCTTSEEECCCC---CSSHHH---------HHHH----H
T ss_pred CcEEEEeCCCC-----------CCCCcc--HHHHHHHHHHHcCCCcEEEEeCC---CCCHHH---------HHHH----H
Confidence 38999999941 111111 011223445554 599999554 555432 2222 2
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCc----CcccccchhhhhHHHHHhcCcc
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF----GFQNEDRTLWEATSTYVEMSPF 823 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~sp~ 823 (953)
+.+... .+.++++|+|+||||++|+.++.++|....+++...+..+...... .+....................
T Consensus 53 ~~~~~~--~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (202)
T 4fle_A 53 ESIVMD--KAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQ 130 (202)
T ss_dssp HHHHHH--HTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTC
T ss_pred HHHHHh--cCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhh
Confidence 333222 1357999999999999999999999887766655544322110000 0000000001111112223445
Q ss_pred cccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 824 ~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
..+.++++|+||+||++|.+|| ++++.++++ ++++.+++|++|.+... +++++.|.+||+
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp--~~~s~~l~~-------~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~ 190 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLD--YRQAVAYYT-------PCRQTVESGGNHAFVGF---DHYFSPIVTFLG 190 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSC--HHHHHHHTT-------TSEEEEESSCCTTCTTG---GGGHHHHHHHHT
T ss_pred hhhhccCceEEEEEeCCCCCCC--HHHHHHHhh-------CCEEEEECCCCcCCCCH---HHHHHHHHHHHh
Confidence 5677889999999999999999 999988863 25889999999987543 356778888886
No 174
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.63 E-value=2.2e-14 Score=186.24 Aligned_cols=379 Identities=11% Similarity=0.031 Sum_probs=220.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||+.++..... .+.+|++.+ + .....+. .....
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~----------------------------------~v~~~d~~~-~--~~~~~~~-~~~~~ 841 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKN----------------------------------KVLLFDIHT-S--GLLAEIH-TGHHS 841 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETT----------------------------------EEEEEETTT-C--CEEEEEE-CSSSS
T ss_pred eEEEEEECCCCCEEEEEcCC----------------------------------cEEEEEecC-C--CceeEEc-CCCCC
Confidence 45678999999999988763 678999854 2 1222222 12334
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+....|||||+.++... ....|.+++++++............ +..++|+|||+.|+....+.....
T Consensus 842 ~v~~~~~sp~~~~l~~~~---------~dg~v~vwd~~~~~~~~~~~~h~~~----v~~v~~spdg~~l~s~s~dg~v~v 908 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIAL---------SQYCVELWNIDSRLKVADCRGHLSW----VHGVMFSPDGSSFLTASDDQTIRV 908 (1249)
T ss_dssp CCCEEEECSSTTEEEEEC---------SSSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceEEEEEcCCCCEEEEEe---------CCCeEEEEEcCCCceeeecCCCccc----eEEEEECCCCCEEEEEeCCCeEEE
Confidence 788999999999998854 3557888898887655433323222 778999999999887744322110
Q ss_pred C------CCCCCCC----------------------CCceeecCCCcccc-chhhhhhcCCcchhhhhh-hhccceEEEE
Q 002209 270 P------KKPLVPL----------------------GPKMQSNEKRDIIQ-VRTFQDLLKDEYDEDLFD-YYATTQLVLV 319 (953)
Q Consensus 270 ~------~~~~~~~----------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~-~~~~~~l~~~ 319 (953)
- ....... +............. .......+....++..+. -...+.|.++
T Consensus 909 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~ 988 (1249)
T 3sfz_A 909 WETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKII 988 (1249)
T ss_dssp EEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEE
T ss_pred EEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEE
Confidence 0 0000000 00000000000000 000000001111111111 1134567788
Q ss_pred Ec-CCceeE-eCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccc
Q 002209 320 SL-DGTVKE-IGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNS 396 (953)
Q Consensus 320 ~~-~g~~~~-l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~ 396 (953)
++ +++... +... ..+..++|||||++|+..+.+ +.|.+|++.++....+..+.
T Consensus 989 d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-------------g~i~vwd~~~~~~~~~~~~~----------- 1044 (1249)
T 3sfz_A 989 ELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-------------SVIQVWNWQTGDYVFLQAHQ----------- 1044 (1249)
T ss_dssp ETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-------------SBEEEEETTTTEEECCBCCS-----------
T ss_pred EcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCceEEEecCC-----------
Confidence 88 665433 3333 778899999999999988744 38999999977665443322
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEec
Q 002209 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 397 ~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~ 476 (953)
..+..+.|+||++ ++.. +..+.+.+|++ .++.....+..+...+..++|||||+.|+..+.+
T Consensus 1045 --~~v~~~~~~~~~~-l~~~-------------~~dg~v~vwd~--~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1045 --ETVKDFRLLQDSR-LLSW-------------SFDGTVKVWNV--ITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD 1106 (1249)
T ss_dssp --SCEEEEEECSSSE-EEEE-------------ESSSEEEEEET--TTTCCCEEEECCSSCCCCEEECSSSSSCEEECCS
T ss_pred --CcEEEEEEcCCCc-EEEE-------------ECCCcEEEEEC--CCCceeEEEcccCCcEEEEEECCCCCEEEEEcCC
Confidence 3346789999885 3333 34568999996 4444456677777788899999999999887655
Q ss_pred ccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEE
Q 002209 477 KTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDL 556 (953)
Q Consensus 477 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 556 (953)
+ .+.+++..++ +...........+.. +.|||||++|+....+. .|++
T Consensus 1107 ~----~v~iwd~~~~--~~~~~l~~h~~~v~~------~~~s~dg~~lat~~~dg---------------------~i~v 1153 (1249)
T 3sfz_A 1107 K----TAKIWSFDLL--SPLHELKGHNGCVRC------SAFSLDGILLATGDDNG---------------------EIRI 1153 (1249)
T ss_dssp S----CCCEECSSSS--SCSBCCCCCSSCEEE------EEECSSSSEEEEEETTS---------------------CCCE
T ss_pred C----cEEEEECCCc--ceeeeeccCCCcEEE------EEECCCCCEEEEEeCCC---------------------EEEE
Confidence 4 3445565554 222222222222222 78999999998876322 3889
Q ss_pred EECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002209 557 FDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (953)
Q Consensus 557 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~ 622 (953)
||+.+++.......... ..........-...+|||||+.++.. . ..+.++++.+++..
T Consensus 1154 wd~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~fs~dg~~l~s~-~-----g~v~vwd~~~g~~~ 1211 (1249)
T 3sfz_A 1154 WNVSDGQLLHSCAPISV--EEGTATHGGWVTDVCFSPDSKTLVSA-G-----GYLKWWNVATGDSS 1211 (1249)
T ss_dssp EESSSSCCCCCCCCCC---------CCSCCCEEEECTTSSCEEEE-S-----SSEEEBCSSSCBCC
T ss_pred EECCCCceEEEeccccc--cccccccCceEEEEEECCCCCEEEEC-C-----CeEEEEECCCCcee
Confidence 99988775443211100 00000000111235799999987643 2 46889998887643
No 175
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.63 E-value=8.9e-15 Score=153.67 Aligned_cols=206 Identities=12% Similarity=0.005 Sum_probs=135.8
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCC
Q 002209 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (953)
Q Consensus 643 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (953)
++...+|.++....+- +.|+||++||+.... ..| ......|+ +||.|+.+ +
T Consensus 6 ~~~~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~-~~~~vi~~---d 56 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG----------SGPPVVLVGGALSTR-----------AGG----APLAERLA-PHFTVICY---D 56 (262)
T ss_dssp EEECTTSCEEEEEEEE----------CSSEEEEECCTTCCG-----------GGG----HHHHHHHT-TTSEEEEE---C
T ss_pred eEEcCCCcEEEEEEcC----------CCCcEEEECCCCcCh-----------HHH----HHHHHHHh-cCcEEEEE---e
Confidence 4566789888866642 146799999964211 011 23344455 89999995 4
Q ss_pred CCCCCChhhhh-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCc
Q 002209 723 IIGEGDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF 801 (953)
Q Consensus 723 ~~G~G~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~ 801 (953)
.+|+|.+.... .......+|+.++++.+ + +++.++|||+||.+++.++.++| +++++|+++|.........
T Consensus 57 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~l------~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~ 128 (262)
T 3r0v_A 57 RRGRGDSGDTPPYAVEREIEDLAAIIDAA------G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRP 128 (262)
T ss_dssp CTTSTTCCCCSSCCHHHHHHHHHHHHHHT------T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSC
T ss_pred cCCCcCCCCCCCCCHHHHHHHHHHHHHhc------C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccc
Confidence 46777775432 23456667776666654 2 58999999999999999999999 9999999998755321110
Q ss_pred Ccccc-------------------------cchhhhhHHHHH------------------------hcCcccccCCCCCc
Q 002209 802 GFQNE-------------------------DRTLWEATSTYV------------------------EMSPFMSANKLKKP 832 (953)
Q Consensus 802 ~~~~~-------------------------~~~~~~~~~~~~------------------------~~sp~~~~~~i~~P 832 (953)
..... .....+..+.+. ...+...+.++++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 208 (262)
T 3r0v_A 129 PVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIP 208 (262)
T ss_dssp CCCTTHHHHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSC
T ss_pred hhhhHHHHHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCC
Confidence 00000 000000000000 00223456788999
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 833 ~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
+|+++|++|..+| ++.+.++.+.+. ..++++++++||. ++.+.+.+.+.+||+
T Consensus 209 ~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~----~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 209 TLVMDGGASPAWI--RHTAQELADTIP----NARYVTLENQTHT----VAPDAIAPVLVEFFT 261 (262)
T ss_dssp EEEEECTTCCHHH--HHHHHHHHHHST----TEEEEECCCSSSS----CCHHHHHHHHHHHHC
T ss_pred EEEEeecCCCCCC--HHHHHHHHHhCC----CCeEEEecCCCcc----cCHHHHHHHHHHHHh
Confidence 9999999999988 888888877664 3689999999993 356778888888875
No 176
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.63 E-value=3.8e-14 Score=154.18 Aligned_cols=274 Identities=10% Similarity=0.074 Sum_probs=168.3
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCC-C-ceeeeecCC
Q 002209 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-G-QEIEIQGFP 186 (953)
Q Consensus 110 ~~~~~~~SPDG-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~-~-~~~~l~~~~ 186 (953)
.+..++|||++ +.|+..+.+ +.|.+|++..+... + ..+.+.++.
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D---------------------------------~~v~~W~~~~~~~~~~~~~~~~~~h~ 65 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRD---------------------------------KTLISWKLTGDDQKFGVPVRSFKGHS 65 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETT---------------------------------SEEEEEEEEEETTEEEEEEEEEECCS
T ss_pred eEEEEEccCCCccEEEEecCC---------------------------------ccEEEecCCCCCccccccceEEeCCc
Confidence 46678999976 677777665 36789988432110 0 112333322
Q ss_pred CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCC
Q 002209 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (953)
Q Consensus 187 ~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 266 (953)
..+....|+|||++|+... ....|.++|+.+++..+........ +..++|+|+++.|+...
T Consensus 66 --~~v~~~~~s~dg~~l~s~s---------~D~~v~~wd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s---- 126 (319)
T 3frx_A 66 --HIVQDCTLTADGAYALSAS---------WDKTLRLWDVATGETYQRFVGHKSD----VMSVDIDKKASMIISGS---- 126 (319)
T ss_dssp --SCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSCEEEEEE----
T ss_pred --ccEEEEEECCCCCEEEEEe---------CCCEEEEEECCCCCeeEEEccCCCc----EEEEEEcCCCCEEEEEe----
Confidence 4688899999999998755 2568889999988765433322222 77899999999988661
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCC--
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPD-- 342 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpD-- 342 (953)
..+.|.++++ ......+... ..+..+.|+|+
T Consensus 127 ---------------------------------------------~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 127 ---------------------------------------------RDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp ---------------------------------------------TTSCEEEEETTSCEEEEECCCSSCEEEEEECCC--
T ss_pred ---------------------------------------------CCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCC
Confidence 1234556677 4444455444 66777888885
Q ss_pred ----CcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002209 343 ----EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (953)
Q Consensus 343 ----G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~ 417 (953)
+..|+..+.+ +.|.+||+...... .+..+ ...+..++|+|||+.|+..
T Consensus 162 ~~~~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~sp~g~~l~s~- 214 (319)
T 3frx_A 162 ADDDSVTIISAGND-------------KMVKAWNLNQFQIEADFIGH-------------NSNINTLTASPDGTLIASA- 214 (319)
T ss_dssp ----CCEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------CSCEEEEEECTTSSEEEEE-
T ss_pred CCCCccEEEEEeCC-------------CEEEEEECCcchhheeecCC-------------CCcEEEEEEcCCCCEEEEE-
Confidence 4466666533 38999999865433 23222 1345679999999977655
Q ss_pred EeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEE
Q 002209 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (953)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (953)
+..+.|.+||+ ..++..........+..++|+|||..|+...... .++|.++... ...
T Consensus 215 ------------~~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~---i~v~~~~~~~----~~~ 272 (319)
T 3frx_A 215 ------------GKDGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG---IKVFSLDPQY----LVD 272 (319)
T ss_dssp ------------ETTCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE---EEEEEETTEE----EEE
T ss_pred ------------eCCCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC---cEEEEeCcCe----eee
Confidence 44668999996 4333322233345577899999999988765321 3566654221 111
Q ss_pred eecCCCcccc--CCCCCCCeEeccCCCEEEEEee
Q 002209 498 LFDRSSEDVY--SDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 498 ~~~~~~~~~~--~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
.......... .......++|||||++|+....
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEeec
Confidence 1111100000 0000011789999999987763
No 177
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.63 E-value=4.3e-14 Score=152.58 Aligned_cols=266 Identities=11% Similarity=0.084 Sum_probs=169.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+....+ +.|.+||+.+ + ...+.+.. ...
T Consensus 15 ~V~~~~fsp~~~~l~s~~~d---------------------------------g~v~lWd~~~-~--~~~~~~~~--~~~ 56 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYS---------------------------------GRVELWNYET-Q--VEVRSIQV--TET 56 (304)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CSS
T ss_pred ceEEEEECCCCCEEEEEcCC---------------------------------CcEEEEECCC-C--ceeEEeec--cCC
Confidence 57789999999999988875 3679999853 2 12233332 223
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+....|+|||++|+... ....|.++|+++++........... +..++|+||++.|+...
T Consensus 57 ~v~~~~~~~~~~~l~s~s---------~d~~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~sgs------- 116 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGS---------DDFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGS------- 116 (304)
T ss_dssp CEEEEEEEGGGTEEEEEE---------TTSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEeCCCCEEEEEC---------CCCEEEEEECCCCcEEEEEeCCCCc----EEEEEEcCCCCEEEEEC-------
Confidence 678899999999998855 3568888999888764433322222 77899999999888661
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-cee-EeCCC-CcccccccCC-CCc
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVK-EIGPP-AVYTSLDPSP-DEK 344 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-~~~-~l~~~-~~~~~~~~Sp-DG~ 344 (953)
..+.|.++|+ ++ ... .+... ..+..++|+| |++
T Consensus 117 ------------------------------------------~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 117 ------------------------------------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp ------------------------------------------TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred ------------------------------------------CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 2245667777 55 333 33333 6788999999 678
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeecc--CCCCceEEEEecc
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRS--DKPSTLYWAETQD 421 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp--Dg~~i~~~~~~~~ 421 (953)
.|+..+.+ +.|.+||+.... ...+.... ..++..+.|+| |++.++-.
T Consensus 155 ~l~sgs~D-------------~~v~iwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~l~s~----- 204 (304)
T 2ynn_A 155 TFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKPYMITA----- 204 (304)
T ss_dssp EEEEEETT-------------SEEEEEETTCSSCSEEEECCC------------TTCEEEEEECCSTTCCEEEEE-----
T ss_pred EEEEEeCC-------------CeEEEEECCCCCccceeccCC------------cCcEEEEEEEEcCCCCEEEEE-----
Confidence 88777644 389999997433 22222111 12234567766 55544443
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecC
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 501 (953)
+..+.|.+||+ .++.....+..+...+..+.|+|+++.|+..+.++ .|.++|..++ +.......
T Consensus 205 --------s~D~~i~iWd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg----~i~iWd~~~~--~~~~~~~~ 268 (304)
T 2ynn_A 205 --------SDDLTIKIWDY--QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG----TLKIWNSSTY--KVEKTLNV 268 (304)
T ss_dssp --------ETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTC--CEEEEECC
T ss_pred --------cCCCeEEEEeC--CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC----eEEEEECCCC--ceeeeccC
Confidence 44568999996 23323344556667778899999999888776554 3445566554 22333333
Q ss_pred CCccccCCCCCCCeEeccCCCE--EEEE
Q 002209 502 SSEDVYSDPGSPMMRRTSTGTY--VIAK 527 (953)
Q Consensus 502 ~~~~~~~~~~~p~~~~SpDG~~--l~~~ 527 (953)
....++. ++|+|+|+. ++..
T Consensus 269 ~~~~~~~------~~~~~~~~~~~~asg 290 (304)
T 2ynn_A 269 GLERSWC------IATHPTGRKNYIASG 290 (304)
T ss_dssp SSSSEEE------EEECTTCGGGCEEEE
T ss_pred CCccEEE------EEECCCCCceEEEEe
Confidence 3333332 678888863 4443
No 178
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.63 E-value=5.8e-15 Score=157.88 Aligned_cols=213 Identities=16% Similarity=0.101 Sum_probs=139.4
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCC
Q 002209 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (953)
Q Consensus 642 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~ 721 (953)
..+...+|.+++...+-|++ .|.||++||++... . ..| ......| +.||.|++ .
T Consensus 5 ~~~~~~~g~~l~~~~~G~~~--------~~~vvllHG~~~~~-----------~--~~w-~~~~~~L-~~~~~vi~---~ 58 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPVE--------GPALFVLHGGPGGN-----------A--YVL-REGLQDY-LEGFRVVY---F 58 (286)
T ss_dssp EEEEECSSCEEEEEEESCTT--------SCEEEEECCTTTCC-----------S--HHH-HHHHGGG-CTTSEEEE---E
T ss_pred eeEEeECCEEEEEEeecCCC--------CCEEEEECCCCCcc-----------h--hHH-HHHHHHh-cCCCEEEE---E
Confidence 34555688889887775421 46799999964211 0 001 1122334 56999999 5
Q ss_pred CCCCCCChhh-h----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 722 PIIGEGDEEA-N----DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 722 ~~~G~G~~~~-~----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
|.+|+|.|.. . ........+|+.+.++.+ ..+++.|+||||||.+++.++.++|+ ++++|++++....
T Consensus 59 Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~ 131 (286)
T 2yys_A 59 DQRGSGRSLELPQDPRLFTVDALVEDTLLLAEAL------GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNF 131 (286)
T ss_dssp CCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBH
T ss_pred CCCCCCCCCCCccCcccCcHHHHHHHHHHHHHHh------CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCc
Confidence 5578888764 2 223567778887777665 23589999999999999999999999 9999999875421
Q ss_pred CC-C-Cc-------C-------ccc----cc-----c------hhh-hh----------------HHH--HH---hcCcc
Q 002209 797 TL-T-PF-------G-------FQN----ED-----R------TLW-EA----------------TST--YV---EMSPF 823 (953)
Q Consensus 797 ~~-~-~~-------~-------~~~----~~-----~------~~~-~~----------------~~~--~~---~~sp~ 823 (953)
.. . .. . +.. .. . ..+ .. ... +. ..+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (286)
T 2yys_A 132 PWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYT 211 (286)
T ss_dssp HHHHHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCG
T ss_pred HHHHHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChh
Confidence 00 0 00 0 000 00 0 000 00 000 00 01122
Q ss_pred cccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 824 ~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
..+.++++|+|+++|++|..++ +. ++++.+ +... +++++|++||... .+..+.+.+.+.+||.+
T Consensus 212 ~~l~~i~~P~lvi~G~~D~~~~--~~-~~~~~~-~~~~----~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 212 PYLTPERRPLYVLVGERDGTSY--PY-AEEVAS-RLRA----PIRVLPEAGHYLW-IDAPEAFEEAFKEALAA 275 (286)
T ss_dssp GGCCCCSSCEEEEEETTCTTTT--TT-HHHHHH-HHTC----CEEEETTCCSSHH-HHCHHHHHHHHHHHHHT
T ss_pred hhhhhcCCCEEEEEeCCCCcCC--Hh-HHHHHh-CCCC----CEEEeCCCCCCcC-hhhHHHHHHHHHHHHHh
Confidence 3466789999999999999998 88 888877 7643 7889999999863 55677888999999976
No 179
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.9e-14 Score=162.90 Aligned_cols=269 Identities=10% Similarity=0.105 Sum_probs=170.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+....+ +.|.+|+. ++ .....+.. ...
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~i~~~--~~--~~~~~~~~--~~~ 150 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN---------------------------------GELRLWNK--TG--ALLNVLNF--HRA 150 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEET--TS--CEEEEECC--CCS
T ss_pred ceEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEeC--CC--CeeeeccC--CCc
Confidence 56788999999999988765 36789984 22 33344433 234
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc-----------cccccceEEecCCeEE
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-----------NAIFDNFVWVNNSTLL 258 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~-----------~~~~~~~~wspDg~~l 258 (953)
.+..+.|+|||+.|+.... ...|.++++.+++............ ...+..+.|+|++..+
T Consensus 151 ~v~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDV---------ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFV 221 (425)
T ss_dssp CEEEEEECTTSSEEEEEET---------TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEE
T ss_pred cEEEEEECCCCCEEEEEec---------CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEE
Confidence 7899999999999988652 5678889998877654433222100 0004578899988744
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-Cccc
Q 002209 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYT 335 (953)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~ 335 (953)
+.. ..+.|+++++ +++. ..+... ..+.
T Consensus 222 ~~~--------------------------------------------------~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 222 IPG--------------------------------------------------PKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp EEC--------------------------------------------------GGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred EEc--------------------------------------------------CCCeEEEEEcCCCceeeeeccCCCceE
Confidence 422 2356888888 6643 334333 7788
Q ss_pred ccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCce
Q 002209 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (953)
Q Consensus 336 ~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~ 414 (953)
.++|+|||+.|+....+ +.|.+||+..+.. ..+..+ ...+..+.|+||| .++
T Consensus 252 ~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDD-------------GTLRIWHGGNGNSQNCFYGH-------------SQSIVSASWVGDD-KVI 304 (425)
T ss_dssp EEEEETTTTEEEEEETT-------------SCEEEECSSSBSCSEEECCC-------------SSCEEEEEEETTT-EEE
T ss_pred EEEECCCCCEEEEEcCC-------------CEEEEEECCCCccceEecCC-------------CccEEEEEECCCC-EEE
Confidence 99999999999887743 3899999985432 233221 1334679999999 333
Q ss_pred EEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCC
Q 002209 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (953)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 493 (953)
.. +..+.+.+|++ ..++. ..+..+...+..+.|+|||+.|+....++ .+.++++.++..
T Consensus 305 ~~-------------~~d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----~i~i~~~~~~~~ 364 (425)
T 1r5m_A 305 SC-------------SMDGSVRLWSL---KQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG----QVNVYDLKKLNS 364 (425)
T ss_dssp EE-------------ETTSEEEEEET---TTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS----CEEEEECHHHHC
T ss_pred EE-------------eCCCcEEEEEC---CCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC----eEEEEECCCCcc
Confidence 33 34568999996 33333 33444466677899999999988876443 344445443210
Q ss_pred ------------------CcEEeecCCCc--cccCCCCCCCeEeccCCCEEEEEee
Q 002209 494 ------------------APRILFDRSSE--DVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 494 ------------------~~~~~~~~~~~--~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
........... .+.. +.|+|||++|+....
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 365 KSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFD------LSWNCAGNKISVAYS 414 (425)
T ss_dssp --------------CEECCEEEEECCTTCCCCEEE------EEECTTSSEEEEEES
T ss_pred ceeeeecccccccCcccchhhhhhcCcccCCceEE------EEccCCCceEEEEec
Confidence 01222222211 2222 789999998887763
No 180
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.63 E-value=1.3e-13 Score=149.17 Aligned_cols=266 Identities=15% Similarity=0.123 Sum_probs=171.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+....+ +.|.+|++.+ + .....+..+ ..
T Consensus 25 ~v~~~~~s~~~~~l~s~~~d---------------------------------g~i~iw~~~~-~--~~~~~~~~h--~~ 66 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSAD---------------------------------KLIKIWGAYD-G--KFEKTISGH--KL 66 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEETTT-C--CEEEEECCC--SS
T ss_pred cEEEEEECCCCCEEEEeeCC---------------------------------CeEEEEeCCC-c--ccchhhccC--CC
Confidence 56788999999999988775 3678999843 2 223334332 24
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+....|+|||+.|+.... ...|.++|+++++........... +..+.|+|+++.|+...
T Consensus 67 ~v~~~~~~~~~~~l~s~~~---------d~~i~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~~------- 126 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASD---------DKTLKIWDVSSGKCLKTLKGHSNY----VFCCNFNPQSNLIVSGS------- 126 (312)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred ceEEEEEcCCCCEEEEECC---------CCEEEEEECCCCcEEEEEcCCCCC----EEEEEEcCCCCEEEEEe-------
Confidence 6889999999999988652 568888999888765443322222 66889999999988661
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEeCCC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDG~~l 346 (953)
..+.|.++|+ +++ ...+... ..+..++|+|||+.|
T Consensus 127 ------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 127 ------------------------------------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp ------------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ------------------------------------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence 2245778888 664 3444444 678889999999999
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
+..+.+ +.|.+||+..+. .+.+.... ...+..++|+|||+.++..
T Consensus 165 ~~~~~d-------------~~i~~wd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~--------- 210 (312)
T 4ery_A 165 VSSSYD-------------GLCRIWDTASGQCLKTLIDDD------------NPPVSFVKFSPNGKYILAA--------- 210 (312)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEECCSS------------CCCEEEEEECTTSSEEEEE---------
T ss_pred EEEeCC-------------CcEEEEECCCCceeeEEeccC------------CCceEEEEECCCCCEEEEE---------
Confidence 887744 389999998544 33332211 0123468999999977665
Q ss_pred ccccccCCeEEEEecCCCCCCCc-eEEeeccccc--CCeeec-cCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecC
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRY--GGISWC-DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~--~~~~~S-pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 501 (953)
+..+.+.+||+ ..++. ..+..+.... ....|+ ++++.|+..+.++ .|.++++.++ +.......
T Consensus 211 ----~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~--~~~~~~~~ 277 (312)
T 4ery_A 211 ----TLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN----LVYIWNLQTK--EIVQKLQG 277 (312)
T ss_dssp ----ETTTEEEEEET---TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS----CEEEEETTTC--CEEEEECC
T ss_pred ----cCCCeEEEEEC---CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC----EEEEEECCCc--hhhhhhhc
Confidence 44568999996 33332 2233222222 223455 5666666554332 4566676664 33333343
Q ss_pred CCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 502 SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 502 ~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
....+.. ++|+|+++.++...
T Consensus 278 h~~~v~~------~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 278 HTDVVIS------TACHPTENIIASAA 298 (312)
T ss_dssp CSSCEEE------EEECSSSSEEEEEE
T ss_pred cCCcEEE------EeecCcCCceEEEE
Confidence 4333333 78999999888765
No 181
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.63 E-value=4.9e-15 Score=155.33 Aligned_cols=212 Identities=17% Similarity=0.134 Sum_probs=130.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|.+++...+-+ . .|.||++||.+... ...| ......|+++||.|+++ |.+|+
T Consensus 9 ~~g~~l~~~~~g~-------~--~~~vvllHG~~~~~----------~~~~----~~~~~~l~~~g~~vi~~---D~~G~ 62 (254)
T 2ocg_A 9 VNGVQLHYQQTGE-------G--DHAVLLLPGMLGSG----------ETDF----GPQLKNLNKKLFTVVAW---DPRGY 62 (254)
T ss_dssp ETTEEEEEEEEEC-------C--SEEEEEECCTTCCH----------HHHC----HHHHHHSCTTTEEEEEE---CCTTS
T ss_pred ECCEEEEEEEecC-------C--CCeEEEECCCCCCC----------ccch----HHHHHHHhhCCCeEEEE---CCCCC
Confidence 3777777655421 1 35789999953110 0001 13345667789999994 55677
Q ss_pred CChhhhh-hh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC------
Q 002209 727 GDEEAND-RF-VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL------ 798 (953)
Q Consensus 727 G~~~~~~-~~-~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~------ 798 (953)
|.+.... .+ ......++.++++++.+.+ .+++.|+||||||.+++.++.++|++++++|++++......
T Consensus 63 G~S~~~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 139 (254)
T 2ocg_A 63 GHSRPPDRDFPADFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIY 139 (254)
T ss_dssp TTCCSSCCCCCTTHHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHH
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHH
Confidence 7764321 11 0112233344444444433 36899999999999999999999999999999876432110
Q ss_pred ---CCcC-cccccch-------------hhhh-HHHHHhc-------CcccccCCCCCcEEEEEeCCCCCCCCchHHHHH
Q 002209 799 ---TPFG-FQNEDRT-------------LWEA-TSTYVEM-------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDR 853 (953)
Q Consensus 799 ---~~~~-~~~~~~~-------------~~~~-~~~~~~~-------sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~ 853 (953)
.... +...... .|.. ...+... .....+.++++|+|+++|++|..+| +..+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~ 217 (254)
T 2ocg_A 140 EGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP--RFHADF 217 (254)
T ss_dssp HTTSCGGGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC--HHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC--HHHHHH
Confidence 0000 0000000 0000 0011111 1133567889999999999999998 888888
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
+.+.+.. .+++++|++||... .+..+.+.+.+.+||
T Consensus 218 ~~~~~~~----~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 218 IHKHVKG----SRLHLMPEGKHNLH-LRFADEFNKLAEDFL 253 (254)
T ss_dssp HHHHSTT----CEEEEETTCCTTHH-HHTHHHHHHHHHHHH
T ss_pred HHHhCCC----CEEEEcCCCCCchh-hhCHHHHHHHHHHHh
Confidence 7776643 48899999999864 455677778888886
No 182
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.63 E-value=2.5e-14 Score=151.76 Aligned_cols=212 Identities=14% Similarity=0.141 Sum_probs=134.4
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
+++.+|.+++...+- + .|.||++||.+... ..| ......|+++||.|++ +|.
T Consensus 3 ~~~~~g~~l~y~~~g--------~--g~~vvllHG~~~~~--------------~~w-~~~~~~l~~~g~~vi~---~D~ 54 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG--------Q--GRPVVFIHGWPLNG--------------DAW-QDQLKAVVDAGYRGIA---HDR 54 (274)
T ss_dssp EECTTSCEEEEEEEC--------S--SSEEEEECCTTCCG--------------GGG-HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEecC--------C--CceEEEECCCcchH--------------HHH-HHHHHHHHhCCCeEEE---EcC
Confidence 456788888765541 1 36799999963211 111 2334567889999999 555
Q ss_pred CCCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCcccEEEEcccCCCCCC--
Q 002209 724 IGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (953)
Q Consensus 724 ~G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~d~~~-- 798 (953)
+|+|.+... .......++|+.+.++.+ +.+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (274)
T 1a8q_A 55 RGHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS 128 (274)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccc
Confidence 688877542 123566677877777664 235899999999999999877765 899999999886421100
Q ss_pred --CCcCcccc---------------------------c-----------chhhhh------------HHHHHhcCccccc
Q 002209 799 --TPFGFQNE---------------------------D-----------RTLWEA------------TSTYVEMSPFMSA 826 (953)
Q Consensus 799 --~~~~~~~~---------------------------~-----------~~~~~~------------~~~~~~~sp~~~~ 826 (953)
.+...... . ...|.. ...+...+....+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (274)
T 1a8q_A 129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL 208 (274)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred ccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHh
Confidence 00000000 0 000000 0001111223346
Q ss_pred CCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc--cHHHHHHHHHHHHH
Q 002209 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE--SIMHVLWETDRWLQ 895 (953)
Q Consensus 827 ~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~i~~fl~ 895 (953)
.++++|+|+++|++|..+| +....+.+..+. ...++++++++||... .+ ..+.+.+.+.+||+
T Consensus 209 ~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQII---PNAELKVYEGSSHGIA-MVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTTT-TSTTHHHHHHHHHHHHHT
T ss_pred hcCCCCEEEEecCcCCCCC--cHHHHHHHHhhC---CCceEEEECCCCCcee-cccCCHHHHHHHHHHHhc
Confidence 7889999999999999998 775544443332 2368999999999875 34 67788888998874
No 183
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.62 E-value=1e-13 Score=152.17 Aligned_cols=289 Identities=10% Similarity=0.060 Sum_probs=167.1
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce-eecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
.+...+|||||+.|+-.++.. .+--+..+++++...... ....... ......+..++|+||++++..+
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~---~r~Wd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~d~~l~~~s------- 100 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLS---GRCWAGSLWLFKDPCAAPNEGFCSAG-VQTEAGVADLTWVGERGILVAS------- 100 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCS---SSCCCEEEEEESSGGGTTCGGGCSEE-EEESSCEEEEEEETTTEEEEEE-------
T ss_pred CEEEEEECCCCCEEEEEeCCc---eEEeeceeeeeccccccCCcceeeee-eccCCCEEEEEEeCCCeEEEEE-------
Confidence 578899999999888654311 011123445554221111 0000000 0001126689999998655433
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-----eCCC-CcccccccCC
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-----IGPP-AVYTSLDPSP 341 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-----l~~~-~~~~~~~~Sp 341 (953)
..+.|.++|+ +|+... +... ..+..++|||
T Consensus 101 -------------------------------------------~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp 137 (344)
T 4gqb_B 101 -------------------------------------------DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS 137 (344)
T ss_dssp -------------------------------------------TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT
T ss_pred -------------------------------------------CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC
Confidence 2245666677 553221 1123 6788999999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~ 420 (953)
||++|+..+.+. .|.+||+.++... .+..+. ..+..++|+||++.++...
T Consensus 138 dg~~l~sgs~d~-------------~i~iwd~~~~~~~~~~~~h~-------------~~V~~~~~~~~~~~~l~s~--- 188 (344)
T 4gqb_B 138 SGTQAVSGSKDI-------------CIKVWDLAQQVVLSSYRAHA-------------AQVTCVAASPHKDSVFLSC--- 188 (344)
T ss_dssp TSSEEEEEETTS-------------CEEEEETTTTEEEEEECCCS-------------SCEEEEEECSSCTTEEEEE---
T ss_pred CCCEEEEEeCCC-------------eEEEEECCCCcEEEEEcCcC-------------CceEEEEecCCCCCceeee---
Confidence 999999887443 8999999865543 333322 3456799999998765541
Q ss_pred cCCCcccccccCCeEEEEecCCCCCCCceEEe--ecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
+..+.|.+||+ .++.....+. .....+..++|+|++..++.....+ + .|.++|+.++ +....
T Consensus 189 ---------s~D~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-g--~v~~wd~~~~--~~~~~ 252 (344)
T 4gqb_B 189 ---------SEDNRILLWDT--RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-G--TVSLVDTKST--SCVLS 252 (344)
T ss_dssp ---------ETTSCEEEEET--TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-S--EEEEEESCC----CCEE
T ss_pred ---------ccccccccccc--cccceeeeeecceeeccceeeeecCCCCcceEEeccC-C--cEEEEECCCC--cEEEE
Confidence 33557889996 2333333332 2233456789999766554443333 2 4666677664 33333
Q ss_pred ecCCCccccCCCCCCCeEeccCCC-EEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCccccee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGT-YVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYE 577 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~ 577 (953)
.......+.. +.|+|||. +|+....+ ..|++||+.+++..++....+.
T Consensus 253 ~~~h~~~v~~------v~fsp~g~~~lasgs~D---------------------~~i~vwd~~~~~~~~~~~H~~~---- 301 (344)
T 4gqb_B 253 SAVHSQCVTG------LVFSPHSVPFLASLSED---------------------CSLAVLDSSLSELFRSQAHRDF---- 301 (344)
T ss_dssp EECCSSCEEE------EEECSSSSCCEEEEETT---------------------SCEEEECTTCCEEEEECCCSSC----
T ss_pred EcCCCCCEEE------EEEccCCCeEEEEEeCC---------------------CeEEEEECCCCcEEEEcCCCCC----
Confidence 3333333443 88999996 45554422 1399999999887665433322
Q ss_pred eeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002209 578 TTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (953)
Q Consensus 578 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g 619 (953)
+.. .+|+|+++.++.+.+... .|.++++.+.
T Consensus 302 -V~~-------v~~sp~~~~llas~s~D~---~v~~w~v~~~ 332 (344)
T 4gqb_B 302 -VRD-------ATWSPLNHSLLTTVGWDH---QVVHHVVPTE 332 (344)
T ss_dssp -EEE-------EEECSSSTTEEEEEETTS---CEEEEECCC-
T ss_pred -EEE-------EEEeCCCCeEEEEEcCCC---eEEEEECCCC
Confidence 222 468999988877666443 4777776553
No 184
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.62 E-value=4.3e-16 Score=158.07 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=131.7
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccch-HHHHHHHcCcEEEEcCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGST-SVLLWLARGFAILGGPTTPIIG 725 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~G~~V~~~~~~~~~G 725 (953)
.+|.+++++.+.|++ ..+.|+||++||+.... ..| ... ....|+++||.|+.++. +|
T Consensus 14 ~~g~~l~~~~~~p~~-----~~~~~~vv~~hG~~~~~-----------~~~---~~~~~~~~l~~~G~~v~~~d~---~g 71 (210)
T 1imj_A 14 VQGQALFFREALPGS-----GQARFSVLLLHGIRFSS-----------ETW---QNLGTLHRLAQAGYRAVAIDL---PG 71 (210)
T ss_dssp ETTEEECEEEEECSS-----SCCSCEEEECCCTTCCH-----------HHH---HHHTHHHHHHHTTCEEEEECC---TT
T ss_pred eCCeEEEEEEeCCCC-----CCCCceEEEECCCCCcc-----------cee---ecchhHHHHHHCCCeEEEecC---CC
Confidence 388999999998864 22478999999963111 001 111 35678889999999555 56
Q ss_pred CCChhhhh--hhHHHHH--HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCc
Q 002209 726 EGDEEAND--RFVEQLV--ACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF 801 (953)
Q Consensus 726 ~G~~~~~~--~~~~~~~--~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~ 801 (953)
+|.+.... ....... .|+.++++.+ +.++++++|||+||.+++.++.++|++++++|+++|......
T Consensus 72 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~--- 142 (210)
T 1imj_A 72 LGHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI--- 142 (210)
T ss_dssp SGGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS---
T ss_pred CCCCCCCCCcchhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc---
Confidence 66654322 1112222 5555555544 246899999999999999999999999999999988643110
Q ss_pred CcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc
Q 002209 802 GFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE 881 (953)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 881 (953)
....+.++++|+|+++|++|. ++ .+.+.++ +.+ ...+++++++++|... .+
T Consensus 143 --------------------~~~~~~~~~~p~l~i~g~~D~-~~--~~~~~~~-~~~----~~~~~~~~~~~~H~~~-~~ 193 (210)
T 1imj_A 143 --------------------NAANYASVKTPALIVYGDQDP-MG--QTSFEHL-KQL----PNHRVLIMKGAGHPCY-LD 193 (210)
T ss_dssp --------------------CHHHHHTCCSCEEEEEETTCH-HH--HHHHHHH-TTS----SSEEEEEETTCCTTHH-HH
T ss_pred --------------------cchhhhhCCCCEEEEEcCccc-CC--HHHHHHH-hhC----CCCCEEEecCCCcchh-hc
Confidence 112234578999999999999 87 7776665 433 3479999999999853 34
Q ss_pred cHHHHHHHHHHHHHH
Q 002209 882 SIMHVLWETDRWLQK 896 (953)
Q Consensus 882 ~~~~~~~~i~~fl~~ 896 (953)
....+.+.+.+||++
T Consensus 194 ~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 194 KPEEWHTGLLDFLQG 208 (210)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHh
Confidence 456677888888865
No 185
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.62 E-value=1.7e-14 Score=153.84 Aligned_cols=211 Identities=11% Similarity=0.126 Sum_probs=131.2
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
....+|..++.... + . -|.||++||.+... ..| . .....|+++||.|++ +|.
T Consensus 11 ~~~~~g~~l~y~~~---G-----~--g~~vvllHG~~~~~-----------~~w---~-~~~~~l~~~g~~vi~---~D~ 62 (281)
T 3fob_A 11 TENQAPIEIYYEDH---G-----T--GKPVVLIHGWPLSG-----------RSW---E-YQVPALVEAGYRVIT---YDR 62 (281)
T ss_dssp EETTEEEEEEEEEE---S-----S--SEEEEEECCTTCCG-----------GGG---T-TTHHHHHHTTEEEEE---ECC
T ss_pred CCCCCceEEEEEEC---C-----C--CCeEEEECCCCCcH-----------HHH---H-HHHHHHHhCCCEEEE---eCC
Confidence 34556666665443 1 1 35688899964221 112 1 224567889999999 555
Q ss_pred CCCCChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCcccEEEEcccCCCCCCC-
Q 002209 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTLT- 799 (953)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~d~~~~- 799 (953)
+|+|.+..+. .......+|+.+.++.+ +.+++.|+||||||.+++.+++. .|++++++|+.++.......
T Consensus 63 ~G~G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~ 136 (281)
T 3fob_A 63 RGFGKSSQPWEGYEYDTFTSDLHQLLEQL------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKS 136 (281)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHHHHc------CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhcc
Confidence 7888875432 23566677777776664 23589999999999977766555 58999999988764221100
Q ss_pred ---CcCccc-c------------------------------cch--------hhh------------hHHHHHhcCcccc
Q 002209 800 ---PFGFQN-E------------------------------DRT--------LWE------------ATSTYVEMSPFMS 825 (953)
Q Consensus 800 ---~~~~~~-~------------------------------~~~--------~~~------------~~~~~~~~sp~~~ 825 (953)
+..... . ... .|. ....+...+....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 216 (281)
T 3fob_A 137 EDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKD 216 (281)
T ss_dssp SSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhh
Confidence 000000 0 000 000 0001112223345
Q ss_pred cCCCCCcEEEEEeCCCCCCCCchHHHHHHH-HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFF-NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 826 ~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
+.++++|+||+||++|..+| ++.+.+++ +.+.. .++++++++||.. ..+..+.+.+.+.+||+
T Consensus 217 l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~p~----~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 217 LEKFNIPTLIIHGDSDATVP--FEYSGKLTHEAIPN----SKVALIKGGPHGL-NATHAKEFNEALLLFLK 280 (281)
T ss_dssp HTTCCSCEEEEEETTCSSSC--GGGTHHHHHHHSTT----CEEEEETTCCTTH-HHHTHHHHHHHHHHHHC
T ss_pred hhhcCCCEEEEecCCCCCcC--HHHHHHHHHHhCCC----ceEEEeCCCCCch-hhhhHHHHHHHHHHHhh
Confidence 67899999999999999998 87664443 43332 5899999999986 35667788888888874
No 186
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.62 E-value=3.7e-15 Score=159.86 Aligned_cols=213 Identities=19% Similarity=0.155 Sum_probs=135.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|.+++...+-+. . +.|.||++||++.... .+ . .....++++||.|++ +|.+|+
T Consensus 12 ~~g~~l~~~~~g~~-----~--~~~~vvllHG~~~~~~-----------~~---~-~~~~~l~~~g~~vi~---~D~~G~ 66 (293)
T 1mtz_A 12 VNGIYIYYKLCKAP-----E--EKAKLMTMHGGPGMSH-----------DY---L-LSLRDMTKEGITVLF---YDQFGC 66 (293)
T ss_dssp ETTEEEEEEEECCS-----S--CSEEEEEECCTTTCCS-----------GG---G-GGGGGGGGGTEEEEE---ECCTTS
T ss_pred ECCEEEEEEEECCC-----C--CCCeEEEEeCCCCcch-----------hH---H-HHHHHHHhcCcEEEE---ecCCCC
Confidence 46778776665321 1 1367899999642211 11 1 112245678999999 555688
Q ss_pred CChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC-----
Q 002209 727 GDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL----- 798 (953)
Q Consensus 727 G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~----- 798 (953)
|.+.... ......++|+.+.++.+. +.+++.|+||||||.+++.+|.++|++++++|++++......
T Consensus 67 G~S~~~~~~~~~~~~~~~dl~~~~~~l~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (293)
T 1mtz_A 67 GRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEM 141 (293)
T ss_dssp TTSCCCCGGGCSHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHH
T ss_pred ccCCCCCCCcccHHHHHHHHHHHHHHhc-----CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHH
Confidence 8775432 235666778777777762 124899999999999999999999999999999987643100
Q ss_pred ------CCcC-------------cccc-c--------------chhhhh-H-H---------HHHh--------------
Q 002209 799 ------TPFG-------------FQNE-D--------------RTLWEA-T-S---------TYVE-------------- 819 (953)
Q Consensus 799 ------~~~~-------------~~~~-~--------------~~~~~~-~-~---------~~~~-------------- 819 (953)
.+.. +... . ...|.. . . .+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 142 NRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred HHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceeccccccc
Confidence 0000 0000 0 000000 0 0 0110
Q ss_pred -cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 820 -MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 820 -~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
.+....+.++++|+|+++|++| .++ +..+.++.+.+.. .++++++++||... .+..+.+.+.+.+||.++
T Consensus 222 ~~~~~~~l~~i~~P~lii~G~~D-~~~--~~~~~~~~~~~~~----~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 222 DWDITDKISAIKIPTLITVGEYD-EVT--PNVARVIHEKIAG----SELHVFRDCSHLTM-WEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTC-SSC--HHHHHHHHHHSTT----CEEEEETTCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred CCChhhhhccCCCCEEEEeeCCC-CCC--HHHHHHHHHhCCC----ceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHhc
Confidence 1112345567899999999999 666 7777777776542 58999999999863 456778889999999764
No 187
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.62 E-value=3.6e-14 Score=157.59 Aligned_cols=240 Identities=12% Similarity=0.136 Sum_probs=154.4
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCC
Q 002209 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (953)
Q Consensus 109 ~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~ 188 (953)
..+..++|||||++|++...+ +.|++|++.. +.......+.. ..
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d---------------------------------~~v~i~~~~~-~~~~~~~~~~~--h~ 52 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNN---------------------------------HEVHIYEKSG-NKWVQVHELKE--HN 52 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSS---------------------------------SEEEEEEEET-TEEEEEEEEEC--CS
T ss_pred CCeEEEEECCCCCEEEEEeCC---------------------------------CEEEEEeCCC-CcEEeeeeecC--CC
Confidence 367889999999999988654 3689999853 11002333433 22
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|+|||+.|+.... ...|.++++++++......... ....+..+.|+|||+.|++..
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~------ 115 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGT---------DRNAYVWTLKGRTWKPTLVILR--INRAARCVRWAPNEKKFAVGS------ 115 (372)
T ss_dssp SCEEEEEEETTTTEEEEEET---------TSCEEEEEEETTEEEEEEECCC--CSSCEEEEEECTTSSEEEEEE------
T ss_pred CcccEEEEeCCCCEEEEEcC---------CCeEEEEECCCCeeeeeEEeec--CCCceeEEEECCCCCEEEEEe------
Confidence 47889999999999988552 4567777777776332221111 111277899999999998761
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc----eeEeCCC--CcccccccCC
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP--AVYTSLDPSP 341 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~----~~~l~~~--~~~~~~~~Sp 341 (953)
..+.|.++++ .+. ...+... ..+..++|+|
T Consensus 116 -------------------------------------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 116 -------------------------------------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp -------------------------------------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred -------------------------------------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 1134555555 443 2333222 6788999999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccC-------------------ceEEEeccCCCcccCCccccccccCcc
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-------------------IFVRELCDLPLAEDIPIAFNSVRKGMR 402 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g-------------------~~~~~l~~~~~~~~~p~~~~~~~~~~~ 402 (953)
||++|+....+ +.|.+||+.. .....+.. ....+.
T Consensus 153 ~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~ 206 (372)
T 1k8k_C 153 NSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-------------SCGWVH 206 (372)
T ss_dssp TSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-------------CSSCEE
T ss_pred CCCEEEEEcCC-------------CCEEEEEcccccccccccccccccccchhhheEecCC-------------CCCeEE
Confidence 99999888744 3899999641 22222221 123456
Q ss_pred ceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceE
Q 002209 403 SINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 403 ~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
.+.|+|||+.++.. +..+.+.+||+ .++.....+..+...+..+.|+|||+.|+.. .++ ...
T Consensus 207 ~~~~~~~~~~l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~--~i~ 268 (372)
T 1k8k_C 207 GVCFSANGSRVAWV-------------SHDSTVCLADA--DKKMAVATLASETLPLLAVTFITESSLVAAG-HDC--FPV 268 (372)
T ss_dssp EEEECSSSSEEEEE-------------ETTTEEEEEEG--GGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTS--SCE
T ss_pred EEEECCCCCEEEEE-------------eCCCEEEEEEC--CCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCC--eEE
Confidence 79999999876665 44567999996 2333334455555567789999999977765 332 246
Q ss_pred EEEEcC
Q 002209 483 TWVISP 488 (953)
Q Consensus 483 l~~~d~ 488 (953)
+|.++.
T Consensus 269 i~~~~~ 274 (372)
T 1k8k_C 269 LFTYDS 274 (372)
T ss_dssp EEEEET
T ss_pred EEEccC
Confidence 777765
No 188
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.62 E-value=1.6e-14 Score=152.53 Aligned_cols=211 Identities=16% Similarity=0.146 Sum_probs=138.6
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
+...||.+++...+-+. ..|+||++||.... ...|. .....| +++|.|++ +|.
T Consensus 9 ~~~~~g~~l~y~~~G~~--------~~p~lvl~hG~~~~--------------~~~w~-~~~~~L-~~~~~vi~---~D~ 61 (266)
T 3om8_A 9 LATSDGASLAYRLDGAA--------EKPLLALSNSIGTT--------------LHMWD-AQLPAL-TRHFRVLR---YDA 61 (266)
T ss_dssp EECTTSCEEEEEEESCT--------TSCEEEEECCTTCC--------------GGGGG-GGHHHH-HTTCEEEE---ECC
T ss_pred EeccCCcEEEEEecCCC--------CCCEEEEeCCCccC--------------HHHHH-HHHHHh-hcCcEEEE---EcC
Confidence 56679999987776432 15789999995321 11111 223344 45899999 555
Q ss_pred CCCCChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-
Q 002209 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP- 800 (953)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~- 800 (953)
+|+|.|.... .......+|+.+.++.+ ..+++.|+||||||.+++.++.++|++++++|++++........
T Consensus 62 rG~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~ 135 (266)
T 3om8_A 62 RGHGASSVPPGPYTLARLGEDVLELLDAL------EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQ 135 (266)
T ss_dssp TTSTTSCCCCSCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhH
Confidence 7888875432 23566777777776665 23589999999999999999999999999999987642211000
Q ss_pred c-----------Cccc----------------ccchhhhh---------H-------HHHHhcCcccccCCCCCcEEEEE
Q 002209 801 F-----------GFQN----------------EDRTLWEA---------T-------STYVEMSPFMSANKLKKPILLVH 837 (953)
Q Consensus 801 ~-----------~~~~----------------~~~~~~~~---------~-------~~~~~~sp~~~~~~i~~P~Li~~ 837 (953)
+ .... ......+. . ..+...+....+.++++|+||++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~ 215 (266)
T 3om8_A 136 WDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIA 215 (266)
T ss_dssp HHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEE
T ss_pred HHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEE
Confidence 0 0000 00000000 0 00111122345678899999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
|++|..+| +..++.+.+.+... ++++++ +||.. ..+..+.+.+.+.+||.
T Consensus 216 G~~D~~~~--~~~~~~l~~~ip~a----~~~~i~-~gH~~-~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 216 GAYDTVTA--ASHGELIAASIAGA----RLVTLP-AVHLS-NVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp ETTCSSSC--HHHHHHHHHHSTTC----EEEEES-CCSCH-HHHCHHHHHHHHHHHHT
T ss_pred eCCCCCCC--HHHHHHHHHhCCCC----EEEEeC-CCCCc-cccCHHHHHHHHHHHhc
Confidence 99999998 88888888777543 888888 69975 46777888888888874
No 189
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=4.3e-13 Score=156.44 Aligned_cols=322 Identities=9% Similarity=0.027 Sum_probs=183.6
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEEC--CCCceeecccCCCcc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV--DTGKARPLFQSPDIY 241 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~--~~g~~~~lt~~~~~~ 241 (953)
.|.+||..+ + .....+ +.+..+...+|||||++|+.... ...|.++|+ .+++...-......
T Consensus 160 ~V~v~D~~t-~--~~~~~i---~~g~~~~~v~~spdg~~l~v~~~---------d~~V~v~D~~~~t~~~~~~i~~g~~- 223 (543)
T 1nir_A 160 QIALVDGDS-K--KIVKVI---DTGYAVHISRMSASGRYLLVIGR---------DARIDMIDLWAKEPTKVAEIKIGIE- 223 (543)
T ss_dssp EEEEEETTT-C--CEEEEE---ECSTTEEEEEECTTSCEEEEEET---------TSEEEEEETTSSSCEEEEEEECCSE-
T ss_pred eEEEEECCC-c--eEEEEE---ecCcccceEEECCCCCEEEEECC---------CCeEEEEECcCCCCcEEEEEecCCC-
Confidence 678999743 2 112233 22233667889999999887652 368999999 67665432222221
Q ss_pred ccccccceEEec----CCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEE
Q 002209 242 LNAIFDNFVWVN----NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLV 317 (953)
Q Consensus 242 ~~~~~~~~~wsp----Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 317 (953)
...++||| ||++|+++. +....+.
T Consensus 224 ----p~~va~sp~~~~dg~~l~v~~------------------------------------------------~~~~~v~ 251 (543)
T 1nir_A 224 ----ARSVESSKFKGYEDRYTIAGA------------------------------------------------YWPPQFA 251 (543)
T ss_dssp ----EEEEEECCSTTCTTTEEEEEE------------------------------------------------EESSEEE
T ss_pred ----cceEEeCCCcCCCCCEEEEEE------------------------------------------------ccCCeEE
Confidence 56889999 999998761 0224566
Q ss_pred EEEc-CCceeE-eCCC------------CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEecc
Q 002209 318 LVSL-DGTVKE-IGPP------------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD 383 (953)
Q Consensus 318 ~~~~-~g~~~~-l~~~------------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~ 383 (953)
++|. +++... +... ..+..+.+||||+.+++.... .+.|++||........++.
T Consensus 252 v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~~~ 319 (543)
T 1nir_A 252 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTVTS 319 (543)
T ss_dssp EEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEEEE
T ss_pred EEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCcceeEE
Confidence 7777 664332 2211 145678899999988776522 3489999987533211111
Q ss_pred CCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE-Eeecc--cccCC
Q 002209 384 LPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLD--LRYGG 460 (953)
Q Consensus 384 ~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~-l~~~~--~~~~~ 460 (953)
.+. ...++.+.|+|||+.++.. . ...+.|.++|+ ..++... +.... .....
T Consensus 320 i~~-----------~~~~~~~~~spdg~~l~va-~-----------~~~~~v~v~D~---~tg~l~~~i~~g~~ph~g~g 373 (543)
T 1nir_A 320 IGA-----------APFLHDGGWDSSHRYFMTA-A-----------NNSNKVAVIDS---KDRRLSALVDVGKTPHPGRG 373 (543)
T ss_dssp EEC-----------CSSCCCEEECTTSCEEEEE-E-----------GGGTEEEEEET---TTTEEEEEEECSSSBCCTTC
T ss_pred ecc-----------CcCccCceECCCCCEEEEE-e-----------cCCCeEEEEEC---CCCeEEEeeccCCCCCCCCC
Confidence 111 1234578999999966443 1 23457888996 4443332 22111 11123
Q ss_pred eee-ccCCceEEEEEecccCceEEEEEcCCCCC-----CCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCC
Q 002209 461 ISW-CDDSLALVYESWYKTRRTRTWVISPGSKD-----VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDE 534 (953)
Q Consensus 461 ~~~-SpDg~~l~~~~~~~~~~~~l~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~ 534 (953)
..| +||+..++++...+.. .|.+++.++.. .+........... ...+.++|||++|+......
T Consensus 374 ~~~~~p~~g~~~~s~~~~d~--~V~v~d~~~~~~~~~~~~~v~~l~~~g~~------~~~v~~~pdg~~l~v~~~~~--- 442 (543)
T 1nir_A 374 ANFVHPKYGPVWSTSHLGDG--SISLIGTDPKNHPQYAWKKVAELQGQGGG------SLFIKTHPKSSHLYVDTTFN--- 442 (543)
T ss_dssp EEEEETTTEEEEEEEBSSSS--EEEEEECCTTTCTTTBTSEEEEEECSCSC------CCCEECCTTCCEEEECCTTC---
T ss_pred cccCCCCCccEEEeccCCCc--eEEEEEeCCCCCchhcCeEEEEEEcCCCC------ceEEEcCCCCCcEEEecCCC---
Confidence 344 6887776665542323 45555555410 1222222221111 12288999999988654100
Q ss_pred CcEEEEecCCCCCCC-CCCeEEEEECCCCceE-EEec-------cCcccceeeeEeeccCCccccccccCCEEEEEEecC
Q 002209 535 GTYILLNGNGATPEG-NIPFLDLFDINTGSKE-RIWE-------SDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESK 605 (953)
Q Consensus 535 ~~~~~~~~~~~~~~~-~~~~L~~~d~~~~~~~-~l~~-------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 605 (953)
+.. ....|.+||+++++.. .+.. .++. ..+. .+.|++||+.+++..++.
T Consensus 443 ------------~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~---~~~~-------~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 443 ------------PDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA---KRVV-------QPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp ------------SSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC---CEEE-------EEEECSSSSEEEEEEECC
T ss_pred ------------CCcccCceEEEEECCCCCCCeEEeechhhcccCCCC---CceE-------eccCCCCCCEEEEEeecC
Confidence 000 0125999999988754 3321 0100 0111 257999999999987654
Q ss_pred -CCCceEEEEECCCCCeeEE
Q 002209 606 -TENTQYYIQSWPDKKSCQI 624 (953)
Q Consensus 606 -~~p~~l~~~~~~~g~~~~L 624 (953)
.....|.++|..+++.+..
T Consensus 501 ~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 501 KNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp TTSCCEEEEEETTTTEEEEE
T ss_pred CCCCCeEEEEECCCceEEEe
Confidence 3357899999999876543
No 190
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.62 E-value=1.8e-14 Score=155.12 Aligned_cols=210 Identities=15% Similarity=0.089 Sum_probs=136.8
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|.+++...+-|++ .|.||++||.+.. ...|....+..|+++||.|++ +|.+|+
T Consensus 8 ~~g~~l~y~~~G~~~--------~~~vvllHG~~~~--------------~~~w~~~~~~~L~~~G~~vi~---~D~rG~ 62 (298)
T 1q0r_A 8 SGDVELWSDDFGDPA--------DPALLLVMGGNLS--------------ALGWPDEFARRLADGGLHVIR---YDHRDT 62 (298)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCC--------------GGGSCHHHHHHHHTTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEeccCCC--------CCeEEEEcCCCCC--------------ccchHHHHHHHHHhCCCEEEe---eCCCCC
Confidence 588888877664321 4679999996321 111222234678888999999 555688
Q ss_pred CChhh--h-h--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCC-CC----
Q 002209 727 GDEEA--N-D--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY-NR---- 796 (953)
Q Consensus 727 G~~~~--~-~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~-d~---- 796 (953)
|.+.. . . .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++.. ..
T Consensus 63 G~S~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (298)
T 1q0r_A 63 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA 136 (298)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCccccc
Confidence 87754 1 1 23566777887777765 23589999999999999999999999999999987654 21
Q ss_pred -------------CCCCcC------c-c----cccc------------------hhhhh--H-----HHHHhc-C-----
Q 002209 797 -------------TLTPFG------F-Q----NEDR------------------TLWEA--T-----STYVEM-S----- 821 (953)
Q Consensus 797 -------------~~~~~~------~-~----~~~~------------------~~~~~--~-----~~~~~~-s----- 821 (953)
...... + . .... ..+.. . ..+... .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (298)
T 1q0r_A 137 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP 216 (298)
T ss_dssp HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred chhhhhhhhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchh
Confidence 000000 0 0 0000 00000 0 000110 0
Q ss_pred -----------cccc-cCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHH
Q 002209 822 -----------PFMS-ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (953)
Q Consensus 822 -----------p~~~-~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 889 (953)
.... +.++++|+|+++|++|..+| +..++++.+.+. ..+++++|++||.. .+.+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gHe~-----p~~~~~~ 285 (298)
T 1q0r_A 217 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLIP----TARLAEIPGMGHAL-----PSSVHGP 285 (298)
T ss_dssp CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTST----TEEEEEETTCCSSC-----CGGGHHH
T ss_pred hhhhhhhcCcccccccccccCCCEEEEEeCCCccCC--HHHHHHHHHhCC----CCEEEEcCCCCCCC-----cHHHHHH
Confidence 0123 66789999999999999998 888777766553 36899999999932 2466788
Q ss_pred HHHHHHHhc
Q 002209 890 TDRWLQKYC 898 (953)
Q Consensus 890 i~~fl~~~l 898 (953)
+.+||.+++
T Consensus 286 i~~fl~~~~ 294 (298)
T 1q0r_A 286 LAEVILAHT 294 (298)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 899998875
No 191
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.62 E-value=8.5e-15 Score=154.90 Aligned_cols=198 Identities=15% Similarity=0.142 Sum_probs=131.3
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh--h-hhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--D-RFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~--~-~~~~~~~~D~~~~ 746 (953)
.|+||++||..... ..| . ..... .+++|.|++ +|.+|+|.+... . .......+|+.+.
T Consensus 15 ~~~vvllHG~~~~~-----------~~w---~-~~~~~-L~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 75 (268)
T 3v48_A 15 APVVVLISGLGGSG-----------SYW---L-PQLAV-LEQEYQVVC---YDQRGTGNNPDTLAEDYSIAQMAAELHQA 75 (268)
T ss_dssp CCEEEEECCTTCCG-----------GGG---H-HHHHH-HHTTSEEEE---CCCTTBTTBCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCccH-----------HHH---H-HHHHH-HhhcCeEEE---ECCCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 57899999953110 111 1 22333 456899999 566788887542 1 2356667777666
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-cCcc---------------cc----
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FGFQ---------------NE---- 806 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~-~~~~---------------~~---- 806 (953)
++.+ ..+++.|+||||||.+++.++.++|++++++|++++........ ..+. ..
T Consensus 76 l~~l------~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 76 LVAA------GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp HHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc------CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhh
Confidence 5543 23589999999999999999999999999999988743211000 0000 00
Q ss_pred -cchhhh--------------------------hHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHH
Q 002209 807 -DRTLWE--------------------------ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALK 859 (953)
Q Consensus 807 -~~~~~~--------------------------~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~ 859 (953)
....|. ....+...+....+.++++|+|+++|++|..+| +..+.++.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~l~~~~p 227 (268)
T 3v48_A 150 LYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVP--TACSSELHAALP 227 (268)
T ss_dssp HSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred cCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccC--HHHHHHHHHhCC
Confidence 000000 000111222334567889999999999999998 888888877664
Q ss_pred hCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 860 GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 860 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
. .++++++++||.. ..+..+.+.+.+.+||.+.+.
T Consensus 228 ~----~~~~~~~~~GH~~-~~e~p~~~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 228 D----SQKMVMPYGGHAC-NVTDPETFNALLLNGLASLLH 262 (268)
T ss_dssp S----EEEEEESSCCTTH-HHHCHHHHHHHHHHHHHHHHH
T ss_pred c----CeEEEeCCCCcch-hhcCHHHHHHHHHHHHHHhcc
Confidence 3 5899999999975 467788899999999987653
No 192
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.61 E-value=2.4e-15 Score=167.98 Aligned_cols=225 Identities=12% Similarity=0.012 Sum_probs=143.7
Q ss_pred CceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcE-
Q 002209 637 LQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA- 714 (953)
Q Consensus 637 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~- 714 (953)
.+++.++|.+. .|..+.+++|+|+++. .+++|+|+++||+.+. ..+ ........|+++|++
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~---~~~~PvlvllHG~~~~--------~~~------~~~~~~~~l~~~g~~~ 228 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWA--------QSM------PVWPVLTSLTHRQQLP 228 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHH--------HTS------CCHHHHHHHHHTTSSC
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC---CCCCCEEEEeCCHHHh--------hcC------cHHHHHHHHHHcCCCC
Confidence 35677788765 6778999999998763 2359999999995211 100 012345678888874
Q ss_pred ---EEEcCCCCCCCCCChhh-hhhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEE
Q 002209 715 ---ILGGPTTPIIGEGDEEA-NDRFVEQLVACAEAAVEEVVRRG--VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGI 788 (953)
Q Consensus 715 ---V~~~~~~~~~G~G~~~~-~~~~~~~~~~D~~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v 788 (953)
|+.+++.+..+...... ...+...... +++.++.++. ..|+++++|+|+||||++|+.++.++|++|++++
T Consensus 229 p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~---el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~ 305 (403)
T 3c8d_A 229 PAVYVLIDAIDTTHRAHELPCNADFWLAVQQ---ELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVL 305 (403)
T ss_dssp SCEEEEECCCSHHHHHHHSSSCHHHHHHHHH---THHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEE
T ss_pred CeEEEEECCCCCccccccCCChHHHHHHHHH---HHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 88876643111100000 1112222222 4556666653 2578899999999999999999999999999999
Q ss_pred EcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEE
Q 002209 789 ARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (953)
Q Consensus 789 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (953)
+++|.+++..... . ...... +.+.. . .......|++++||+.|..+ ..++++++++|++.|+++++.
T Consensus 306 ~~sg~~~~~~~~~--~-~~~~~~---~~~~~-~---~~~~~~~~i~l~~G~~D~~~---~~~~~~l~~~L~~~G~~v~~~ 372 (403)
T 3c8d_A 306 SQSGSYWWPHRGG--Q-QEGVLL---EKLKA-G---EVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESIFWR 372 (403)
T ss_dssp EESCCTTTTCTTS--S-SCCHHH---HHHHT-T---SSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSEEEE
T ss_pred EeccccccCCCCC--C-cHHHHH---HHHHh-c---cccCCCceEEEEeeCCCchh---HHHHHHHHHHHHhCCCCEEEE
Confidence 9999865322100 0 001111 11111 1 12345689999999998653 688999999999999999999
Q ss_pred EeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 869 ILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 869 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
+||| +|.+. .....+...+.||.+..
T Consensus 373 ~~~G-gH~~~---~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 373 QVDG-GHDAL---CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp EESC-CSCHH---HHHHHHHHHHHHHHGGG
T ss_pred EeCC-CCCHH---HHHHHHHHHHHHHhccc
Confidence 9999 69752 23455666777776643
No 193
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.61 E-value=4.2e-15 Score=157.58 Aligned_cols=222 Identities=12% Similarity=0.090 Sum_probs=133.1
Q ss_pred ceEEEEEEcCC-CcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEE
Q 002209 638 QKELIKYQRKD-GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (953)
Q Consensus 638 ~~~~~~~~~~d-g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V 715 (953)
..+.+++.+.. |..+..++|+|+++++.+ ++|+|+++||+.. +..........+++ .+.+|
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~--~yPvly~l~G~~~---------------~~~~~~~~~~~l~~~~~~iv 74 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDGNAV---------------MDRLDDELLKQLSEKTPPVI 74 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTT--CEEEEEESSHHHH---------------HHHCCHHHHHHHTTSCCCEE
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCC--CCCEEEEeeChhH---------------HHHHHHHHHHHhccCCCeEE
Confidence 56778888776 679999999999987644 5999887777421 00001122334554 57777
Q ss_pred EEcCCCCCCC-----CCChhhhhh----------------hHHHHHHHH--HHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 002209 716 LGGPTTPIIG-----EGDEEANDR----------------FVEQLVACA--EAAVEEVVRRGVAHPSKIAVGGHSYGAFM 772 (953)
Q Consensus 716 ~~~~~~~~~G-----~G~~~~~~~----------------~~~~~~~D~--~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 772 (953)
+.+++.+... ++....+.. -....+.+. .+.+.++.++..+|++|++|+|+||||++
T Consensus 75 V~v~~~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~ 154 (278)
T 2gzs_A 75 VAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLF 154 (278)
T ss_dssp EEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHH
T ss_pred EEEcCCCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHH
Confidence 7644321100 000000000 000111111 12334455556688889999999999999
Q ss_pred HHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCC------C
Q 002209 773 TANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSG------T 846 (953)
Q Consensus 773 a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~------~ 846 (953)
|++++.+ |+.|+++++.+|...+.. .... .......+. ..-..|+++.||+.|..++ .
T Consensus 155 a~~~~~~-p~~f~~~~~~s~~~~~~~---------~~~~---~~~~~~~~~---~~~~~~i~l~~G~~d~~~~~~~~~~~ 218 (278)
T 2gzs_A 155 VLDSWLS-SSYFRSYYSASPSLGRGY---------DALL---SRVTAVEPL---QFCTKHLAIMEGSATQGDNRETHAVG 218 (278)
T ss_dssp HHHHHHH-CSSCSEEEEESGGGSTTH---------HHHH---HHHHTSCTT---TTTTCEEEEEECCC-----------C
T ss_pred HHHHHhC-ccccCeEEEeCcchhcCc---------chHH---HHHHHhhcc---CCCCCcEEEEecCccccccccchhhh
Confidence 9999999 999999999998643210 0000 011111110 1124689999999997631 0
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 847 LTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 847 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+..++++++++|++.|+++++.++||++|.+... .. +...+.||.+
T Consensus 219 ~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~~---~~-~~~~l~fl~~ 264 (278)
T 2gzs_A 219 VLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFN---AS-FRQALLDISG 264 (278)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHH---HH-HHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCCeeEEEEcCCCCccchhH---HH-HHHHHHHHhh
Confidence 1688999999999999999999999999975321 12 2344556654
No 194
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.61 E-value=6e-15 Score=159.04 Aligned_cols=213 Identities=12% Similarity=0.083 Sum_probs=140.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCC
Q 002209 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (953)
Q Consensus 648 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G 727 (953)
+|..+.....- +.|+||++||..... ..|. .....|+++||.|+++| .+|+|
T Consensus 17 ~g~~l~~~~~g----------~~~~vv~~HG~~~~~-----------~~~~----~~~~~l~~~g~~v~~~d---~~G~G 68 (309)
T 3u1t_A 17 EGATIAYVDEG----------SGQPVLFLHGNPTSS-----------YLWR----NIIPYVVAAGYRAVAPD---LIGMG 68 (309)
T ss_dssp TTEEEEEEEEE----------CSSEEEEECCTTCCG-----------GGGT----TTHHHHHHTTCEEEEEC---CTTST
T ss_pred CCeEEEEEEcC----------CCCEEEEECCCcchh-----------hhHH----HHHHHHHhCCCEEEEEc---cCCCC
Confidence 78887765542 146899999964211 1121 23456688999999954 46777
Q ss_pred Chhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCccc
Q 002209 728 DEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN 805 (953)
Q Consensus 728 ~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~ 805 (953)
.+.... ........|+.++++.+ +.+++.|+||||||.+++.++.++|++++++|++++..........+..
T Consensus 69 ~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 142 (309)
T 3u1t_A 69 DSAKPDIEYRLQDHVAYMDGFIDAL------GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEA 142 (309)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHH------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGG
T ss_pred CCCCCCcccCHHHHHHHHHHHHHHc------CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccc
Confidence 775432 23566677777776665 2368999999999999999999999999999999876542210000000
Q ss_pred c--------------------------------------cchhhhhHHHHHh-----------------c----------
Q 002209 806 E--------------------------------------DRTLWEATSTYVE-----------------M---------- 820 (953)
Q Consensus 806 ~--------------------------------------~~~~~~~~~~~~~-----------------~---------- 820 (953)
. .....+....+.. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T 3u1t_A 143 MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAE 222 (309)
T ss_dssp GHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHH
T ss_pred cchhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhh
Confidence 0 0000000000100 0
Q ss_pred ----CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 821 ----SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 821 ----sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+....+.++++|+|+++|++|..+| ...+.++.+.+.. .++++++++||... .+....+.+.+.+||++
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 295 (309)
T 3u1t_A 223 AEVLKNGEWLMASPIPKLLFHAEPGALAP--KPVVDYLSENVPN----LEVRFVGAGTHFLQ-EDHPHLIGQGIADWLRR 295 (309)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSTT----EEEEEEEEESSCHH-HHCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCEEEEecCCCCCCC--HHHHHHHHhhCCC----CEEEEecCCcccch-hhCHHHHHHHHHHHHHh
Confidence 0112245678999999999999998 8888788777643 47777799999753 56678888999999999
Q ss_pred hccCC
Q 002209 897 YCVSN 901 (953)
Q Consensus 897 ~l~~~ 901 (953)
.....
T Consensus 296 ~~~~~ 300 (309)
T 3u1t_A 296 NKPHA 300 (309)
T ss_dssp HCCCC
T ss_pred cchhh
Confidence 86543
No 195
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.61 E-value=1.4e-14 Score=154.14 Aligned_cols=209 Identities=15% Similarity=0.097 Sum_probs=136.1
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (953)
..+|.+++...+- . -|.||++||.+... ..| ......|+++||.|++ +|.+|
T Consensus 9 ~~~g~~l~y~~~g--------~--g~pvvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~~G 60 (277)
T 1brt_A 9 NSTSIDLYYEDHG--------T--GQPVVLIHGFPLSG-----------HSW----ERQSAALLDAGYRVIT---YDRRG 60 (277)
T ss_dssp TTEEEEEEEEEEC--------S--SSEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECCTT
T ss_pred cCCCcEEEEEEcC--------C--CCeEEEECCCCCcH-----------HHH----HHHHHHHhhCCCEEEE---eCCCC
Confidence 4566677655441 1 23488999964211 111 2345567888999999 55578
Q ss_pred CCChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-cccEEEEcccCCCCCCC---
Q 002209 726 EGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLT--- 799 (953)
Q Consensus 726 ~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~d~~~~--- 799 (953)
+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|+ +++++|++++.......
T Consensus 61 ~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~ 134 (277)
T 1brt_A 61 FGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD 134 (277)
T ss_dssp STTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTT
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCcccccccc
Confidence 88875432 23567778888887775 23589999999999999999999998 99999999874321110
Q ss_pred -CcC-cccc-----------cc-h--------hh------------hhHHHHH------------------hcCcccccC
Q 002209 800 -PFG-FQNE-----------DR-T--------LW------------EATSTYV------------------EMSPFMSAN 827 (953)
Q Consensus 800 -~~~-~~~~-----------~~-~--------~~------------~~~~~~~------------------~~sp~~~~~ 827 (953)
+.. .... .. . .+ +..+.+. ..+....+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (277)
T 1brt_A 135 NPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIP 214 (277)
T ss_dssp BTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGG
T ss_pred CccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcc
Confidence 000 0000 00 0 00 0000000 011223456
Q ss_pred CCCCcEEEEEeCCCCCCCCchHHH-HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 828 KLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 828 ~i~~P~Li~~G~~D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
++++|+|+++|++|..+| ++.+ ..+.+.+.. .++++++++||... .+..+.+.+.+.+||.
T Consensus 215 ~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 215 RIDVPALILHGTGDRTLP--IENTARVFHKALPS----AEYVEVEGAPHGLL-WTHAEEVNTALLAFLA 276 (277)
T ss_dssp GCCSCEEEEEETTCSSSC--GGGTHHHHHHHCTT----SEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred cCCCCeEEEecCCCccCC--hHHHHHHHHHHCCC----CcEEEeCCCCcchh-hhCHHHHHHHHHHHHh
Confidence 789999999999999998 8877 777666543 48899999999863 4567788888999885
No 196
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.61 E-value=5.9e-14 Score=159.91 Aligned_cols=294 Identities=13% Similarity=0.114 Sum_probs=174.4
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCC
Q 002209 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (953)
Q Consensus 110 ~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~ 188 (953)
.+..++|+| +++.||..+.+ +.|.|||+.. + .....+....+.
T Consensus 121 ~V~~l~~~P~~~~~lasGs~d---------------------------------g~i~lWd~~~-~--~~~~~~~~~gH~ 164 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKG---------------------------------GDIMLWNFGI-K--DKPTFIKGIGAG 164 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETT---------------------------------SCEEEECSSC-C--SCCEEECCCSSS
T ss_pred CEEEEEEeCCCCCEEEEEeCC---------------------------------CEEEEEECCC-C--CceeEEEccCCC
Confidence 366789999 56677777665 4789999853 2 111222212233
Q ss_pred CcccceEecc-CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCC
Q 002209 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (953)
Q Consensus 189 ~~~~~~~wSP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 267 (953)
..+....|+| ||+.|+..+ .+..|.++|++++..+.+...... +..+..++|+|||+.|+...
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s---------~D~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~----- 228 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASS---------MEGTTRLQDFKGNILRVFASSDTI--NIWFCSLDVSASSRMVVTGD----- 228 (435)
T ss_dssp CCCCEEEECSSCTTEEEEEC---------SSSCEEEEETTSCEEEEEECCSSC--SCCCCCEEEETTTTEEEEEC-----
T ss_pred CCEEEEEEeCCCCCEEEEEe---------CCCEEEEeeccCCceeEEeccCCC--CccEEEEEECCCCCEEEEEe-----
Confidence 4799999999 677776643 245677889888766554433221 11245789999999998761
Q ss_pred CCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCCCcE
Q 002209 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKY 345 (953)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~ 345 (953)
..+.|.++|+ +.....+... ..+..++|+|+|+.
T Consensus 229 --------------------------------------------~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 229 --------------------------------------------NVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp --------------------------------------------SSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSS
T ss_pred --------------------------------------------CCCcEeeeccCcceeEEEecccceEEeeeecCCCce
Confidence 2246777888 4445555444 77889999999997
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
++++... .+.|.+||+...... .+... .+....+..++|+|||+.|+..
T Consensus 265 ~~~s~s~------------d~~v~iwd~~~~~~~~~~~~~----------~~h~~~v~~~~~spdg~~l~s~-------- 314 (435)
T 4e54_B 265 FLATASV------------DQTVKIWDLRQVRGKASFLYS----------LPHRHPVNAACFSPDGARLLTT-------- 314 (435)
T ss_dssp EEEEEET------------TSBCCEEETTTCCSSSCCSBC----------CBCSSCEEECCBCTTSSEEEEE--------
T ss_pred EEEEecC------------cceeeEEecccccccceEEEe----------eeccccccceeECCCCCeeEEE--------
Confidence 6665422 237999999743321 11111 1122345678999999977655
Q ss_pred cccccccCCeEEEEecCCCCCCCceEEeeccc------ccCCeeeccCCceEEEEEeccc--------CceEEEEEcCCC
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYKT--------RRTRTWVISPGS 490 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~------~~~~~~~SpDg~~l~~~~~~~~--------~~~~l~~~d~~~ 490 (953)
+..+.|.+|++ .++.....+..... ......|+|++..++.....+. ....|.+++..+
T Consensus 315 -----~~D~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 315 -----DQKSEIRVYSA--SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp -----ESSSCEEEEES--SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred -----cCCCEEEEEEC--CCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 44567889996 33333333322211 1234578888888777643221 112366667766
Q ss_pred CCCCcEEeecCCCccccCCCCCCCe-EeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceE
Q 002209 491 KDVAPRILFDRSSEDVYSDPGSPMM-RRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (953)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~ 565 (953)
+. ....+.......+.. + .|||||++|+... + ..|++||+.+++.+
T Consensus 388 g~-~~~~l~~~~~~~v~s------~~~fspdg~~lasg~-d---------------------~~i~iW~~~~gk~r 434 (435)
T 4e54_B 388 GK-MMCQLYDPESSGISS------LNEFNPMGDTLASAM-G---------------------YHILIWSQQEARTR 434 (435)
T ss_dssp CC-EEEEECCSSCCCCCC------EEEECTTSSCEEEEC-S---------------------SEEEECCCC-----
T ss_pred Cc-EEEEEeCCCCCcEEE------EEEECCCCCEEEEEc-C---------------------CcEEEEECCcCeee
Confidence 41 122223333322222 3 6999999987643 1 14899999888765
No 197
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.61 E-value=7.6e-14 Score=155.98 Aligned_cols=275 Identities=13% Similarity=0.106 Sum_probs=165.9
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCC
Q 002209 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (953)
Q Consensus 110 ~~~~~~~SPDG-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~ 188 (953)
.+..++||||| ++|+....+ +.|.||++.. + .....+......
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~d---------------------------------g~i~iwd~~~-~--~~~~~~~~~~h~ 118 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKG---------------------------------GDIILWDYDV-Q--NKTSFIQGMGPG 118 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBT---------------------------------SCEEEEETTS-T--TCEEEECCCSTT
T ss_pred CEEEEEECCCCCCEEEEEcCC---------------------------------CeEEEEeCCC-c--ccceeeecCCcC
Confidence 46678999999 888887765 3679999953 2 112222211233
Q ss_pred CcccceEecc-CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCC
Q 002209 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (953)
Q Consensus 189 ~~~~~~~wSP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 267 (953)
..+....|+| |++.|+... ....|.++|+.++....+..... ....+..++|+|||+.|+...
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~----- 182 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSS---------IRGATTLRDFSGSVIQVFAKTDS--WDYWYCCVDVSVSRQMLATGD----- 182 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEE---------TTTEEEEEETTSCEEEEEECCCC--SSCCEEEEEEETTTTEEEEEE-----
T ss_pred CceeEEEeCCCCCCEEEEEe---------CCCEEEEEECCCCceEEEeccCC--CCCCeEEEEECCCCCEEEEEC-----
Confidence 4789999999 667666644 25678888988766555543331 112267899999999888661
Q ss_pred CCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcC-CceeEeCCC-CcccccccCCCCc-
Q 002209 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLD-GTVKEIGPP-AVYTSLDPSPDEK- 344 (953)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~-g~~~~l~~~-~~~~~~~~SpDG~- 344 (953)
..+.|.++|++ .....+... ..+..++|+|||+
T Consensus 183 --------------------------------------------~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 183 --------------------------------------------STGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp --------------------------------------------TTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTT
T ss_pred --------------------------------------------CCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCC
Confidence 22567788884 445555544 7788999999999
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccC----ceEEEeccCCCcccCCccccccccCccceeecc-CCCCceEEEEe
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYWAET 419 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g----~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp-Dg~~i~~~~~~ 419 (953)
.|+..+.+ +.|.+||+.. +.......+ ...+..++|+| ||+.++..
T Consensus 219 ~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~~l~~~--- 269 (383)
T 3ei3_B 219 LMATSSVD-------------ATVKLWDLRNIKDKNSYIAEMPH-------------EKPVNAAYFNPTDSTKLLTT--- 269 (383)
T ss_dssp EEEEEETT-------------SEEEEEEGGGCCSTTCEEEEEEC-------------SSCEEEEEECTTTSCEEEEE---
T ss_pred EEEEEeCC-------------CEEEEEeCCCCCcccceEEEecC-------------CCceEEEEEcCCCCCEEEEE---
Confidence 55555533 3899999974 222221111 13456899999 99877665
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCCCceEEeeccc------ccCCeeeccCCceEEEEEecc-----cCceEEEEEcC
Q 002209 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYK-----TRRTRTWVISP 488 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~------~~~~~~~SpDg~~l~~~~~~~-----~~~~~l~~~d~ 488 (953)
+..+.|.+||+ .++.....+..... ......|+|++..++.....+ .....+.++|+
T Consensus 270 ----------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 270 ----------DQRNEIRVYSS--YDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDA 337 (383)
T ss_dssp ----------ESSSEEEEEET--TBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEET
T ss_pred ----------cCCCcEEEEEC--CCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEec
Confidence 44568999996 33333344433221 111245666665544332110 01125667777
Q ss_pred CCCCCCcEEeecCC-CccccCCCCCCCeEeccCCCEEEEEe
Q 002209 489 GSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 489 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
.++ +........ ...... .+.|+|||++|+...
T Consensus 338 ~~~--~~~~~l~~~~~~~~~~-----~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 338 NSG--GLVHQLRDPNAAGIIS-----LNKFSPTGDVLASGM 371 (383)
T ss_dssp TTC--CEEEEECBTTBCSCCC-----EEEECTTSSEEEEEE
T ss_pred CCC--ceeeeecCCCCCceEE-----EEEEecCccEEEEec
Confidence 664 222222221 111111 158999999987774
No 198
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.61 E-value=2.1e-13 Score=153.09 Aligned_cols=287 Identities=12% Similarity=0.126 Sum_probs=169.6
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCc--------------cccccccceEEecC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--------------YLNAIFDNFVWVNN 254 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--------------~~~~~~~~~~wspD 254 (953)
..+...+|||||++||... ...+.++++.+|+.......... .....+..++|+||
T Consensus 65 ~~V~~v~fspdg~~la~g~----------~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC----------NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC----------BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CEEEEEEECCCCCEEEEEc----------CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 4688899999999998743 23566677777664332211100 00011557899999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-eCCC-
Q 002209 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPP- 331 (953)
Q Consensus 255 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-l~~~- 331 (953)
|+.|+... ..+.|.++|+ +++... +...
T Consensus 135 g~~l~s~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~h~ 165 (393)
T 1erj_A 135 GKFLATGA-------------------------------------------------EDRLIRIWDIENRKIVMILQGHE 165 (393)
T ss_dssp SSEEEEEE-------------------------------------------------TTSCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEc-------------------------------------------------CCCeEEEEECCCCcEEEEEccCC
Confidence 99998761 2245777888 675443 4434
Q ss_pred CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc-CC
Q 002209 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DK 410 (953)
Q Consensus 332 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp-Dg 410 (953)
..+..++|+|||++|+..+.+. .|.+||+.+++........ .++..++|+| ||
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d~-------------~v~iwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 219 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGDR-------------TVRIWDLRTGQCSLTLSIE-------------DGVTTVAVSPGDG 219 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-------------EEEEEETTTTEEEEEEECS-------------SCEEEEEECSTTC
T ss_pred CCEEEEEEcCCCCEEEEecCCC-------------cEEEEECCCCeeEEEEEcC-------------CCcEEEEEECCCC
Confidence 7788999999999998877443 8999999866543322211 2346789999 88
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEE-------eecccccCCeeeccCCceEEEEEecccCceE
Q 002209 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL-------HKLDLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l-------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
+.++.. +..+.+.+||+ ..+.. ..+ ..+...+..++|+|||+.|+..+.++. .+
T Consensus 220 ~~l~~~-------------s~d~~v~iwd~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~--v~ 281 (393)
T 1erj_A 220 KYIAAG-------------SLDRAVRVWDS---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS--VK 281 (393)
T ss_dssp CEEEEE-------------ETTSCEEEEET---TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE--EE
T ss_pred CEEEEE-------------cCCCcEEEEEC---CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE--EE
Confidence 766655 44567888986 33332 223 233455677999999999887765442 24
Q ss_pred EEEEcCCCCCC----------CcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCC
Q 002209 483 TWVISPGSKDV----------APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIP 552 (953)
Q Consensus 483 l~~~d~~~~~~----------~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (953)
+| |+..... ............+.. +.|+|+|++|+....+ .
T Consensus 282 ~w--d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------~~~~~~~~~l~sgs~D---------------------~ 332 (393)
T 1erj_A 282 LW--NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS------VATTQNDEYILSGSKD---------------------R 332 (393)
T ss_dssp EE--EC---------------CEEEEEECCSSCEEE------EEECGGGCEEEEEETT---------------------S
T ss_pred EE--ECCCCCCcccccCCCCCcceEEEecccCcEEE------EEECCCCCEEEEEeCC---------------------C
Confidence 55 4433210 001111122222222 7899999988876532 2
Q ss_pred eEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002209 553 FLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (953)
Q Consensus 553 ~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~ 616 (953)
.+++||+.+++.......... .+..+ .......|+|+++.++ +.+.. ..+.+|+.
T Consensus 333 ~v~iwd~~~~~~~~~l~~h~~----~v~~v-~~~~~~~~~p~~~~l~-sgs~D---g~i~iW~~ 387 (393)
T 1erj_A 333 GVLFWDKKSGNPLLMLQGHRN----SVISV-AVANGSSLGPEYNVFA-TGSGD---CKARIWKY 387 (393)
T ss_dssp EEEEEETTTCCEEEEEECCSS----CEEEE-EECSSCTTCTTCEEEE-EEETT---SEEEEEEE
T ss_pred eEEEEECCCCeEEEEECCCCC----CEEEE-EecCCcCcCCCCCEEE-EECCC---CcEEECcc
Confidence 499999998887655443322 11111 1112234667776554 33322 34666654
No 199
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.60 E-value=3e-13 Score=148.20 Aligned_cols=260 Identities=13% Similarity=0.081 Sum_probs=146.6
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECC--CCceeecccCCCcc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKARPLFQSPDIY 241 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~--~g~~~~lt~~~~~~ 241 (953)
.|++|++..+| ..+.+........+..++|||||++|++... .+ ..|.+++++ +++.+.+.......
T Consensus 16 ~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~------~~--~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 16 QIHVWNLNHEG---ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR------PE--FRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEEECTTS---CEEEEEEEECSSCCCCEEECTTSSEEEEEET------TT--TEEEEEEECTTTCCEEEEEEEECSS
T ss_pred eEEEEEECCCC---cEEEeeeEecCCCCceEEECCCCCEEEEeec------CC--CeEEEEEecCCCCceeeccccccCC
Confidence 67999984323 2222222233346788999999999988653 12 455555544 77755443222111
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc
Q 002209 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (953)
Q Consensus 242 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 321 (953)
.+..++|+|||+.|+++.. ..+.|.++++
T Consensus 85 ---~~~~~~~s~dg~~l~~~~~------------------------------------------------~~~~i~~~d~ 113 (343)
T 1ri6_A 85 ---SLTHISTDHQGQFVFVGSY------------------------------------------------NAGNVSVTRL 113 (343)
T ss_dssp ---CCSEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEEE
T ss_pred ---CCcEEEEcCCCCEEEEEec------------------------------------------------CCCeEEEEEC
Confidence 1568999999998887610 1234556666
Q ss_pred -CCc---ee-EeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC-ceEEEec--cCCCcccCCcc
Q 002209 322 -DGT---VK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFVRELC--DLPLAEDIPIA 393 (953)
Q Consensus 322 -~g~---~~-~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g-~~~~~l~--~~~~~~~~p~~ 393 (953)
+|. .. .+.....+..++|||||++|++.... .+.|.+|+++. +....+. .....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~~~~~~------ 175 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK------------QDRICLFTVSDDGHLVAQDPAEVTTV------ 175 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG------------GTEEEEEEECTTSCEEEEEEEEEECS------
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCC------------CCEEEEEEecCCCceeeecccccccC------
Confidence 442 22 22222567789999999999777522 23799999975 5444322 11100
Q ss_pred ccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec---c------cccCCeeec
Q 002209 394 FNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL---D------LRYGGISWC 464 (953)
Q Consensus 394 ~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~---~------~~~~~~~~S 464 (953)
....++.++|+|||+.+++.. ...+.+.+++++. .+++...+... . .....++|+
T Consensus 176 ---~~~~~~~~~~~pdg~~l~~~~------------~~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 176 ---EGAGPRHMVFHPNEQYAYCVN------------ELNSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp ---TTCCEEEEEECTTSSEEEEEE------------TTTTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred ---CCCCcceEEECCCCCEEEEEe------------CCCCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceEEC
Confidence 002345789999999766551 1345788888621 22333322111 1 112248999
Q ss_pred cCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC-CccccCCCCCCCeEeccCCCEEEEEe
Q 002209 465 DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
|||++|+++...+ ....+|.++..++ ....+.... ...... +.|+|||++|+...
T Consensus 240 ~dg~~l~v~~~~~-~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~------~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 240 PDGRHLYACDRTA-SLITVFSVSEDGS--VLSKEGFQPTETQPRG------FNVDHSGKYLIAAG 295 (343)
T ss_dssp TTSSEEEEEETTT-TEEEEEEECTTSC--CEEEEEEEECSSSCCC------EEECTTSSEEEEEC
T ss_pred CCCCEEEEEecCC-CEEEEEEEcCCCC--ceEEeeeecCCCccce------EEECCCCCEEEEec
Confidence 9999987665333 3234555543343 222221111 111111 78999999888765
No 200
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.60 E-value=7.1e-15 Score=156.18 Aligned_cols=202 Identities=13% Similarity=0.120 Sum_probs=129.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|.++.+..+.|++ .|+||++||.+... ..| ......|+++||.|+.+|. +|+
T Consensus 11 ~~g~~l~~~~~g~~~--------~~~vv~~hG~~~~~-----------~~~----~~~~~~l~~~G~~v~~~d~---~G~ 64 (286)
T 3qit_A 11 FGGNQICLCSWGSPE--------HPVVLCIHGILEQG-----------LAW----QEVALPLAAQGYRVVAPDL---FGH 64 (286)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEEECC---TTS
T ss_pred cCCceEEEeecCCCC--------CCEEEEECCCCccc-----------chH----HHHHHHhhhcCeEEEEECC---CCC
Confidence 488899988886532 57899999964211 111 2456678899999999554 577
Q ss_pred CChhhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-c
Q 002209 727 GDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-F 801 (953)
Q Consensus 727 G~~~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~-~ 801 (953)
|.+.... ........|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++........ .
T Consensus 65 G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 138 (286)
T 3qit_A 65 GRSSHLEMVTSYSSLTFLAQIDRVIQEL------PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKE 138 (286)
T ss_dssp TTSCCCSSGGGCSHHHHHHHHHHHHHHS------CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---C
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHhc------CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccch
Confidence 7664422 22445555655555443 34689999999999999999999999999999999875532211 0
Q ss_pred C--------------------cccccc---------hhh--hhHHHH---------------------------------
Q 002209 802 G--------------------FQNEDR---------TLW--EATSTY--------------------------------- 817 (953)
Q Consensus 802 ~--------------------~~~~~~---------~~~--~~~~~~--------------------------------- 817 (953)
. +..... ..+ .....+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 3qit_A 139 SAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPG 218 (286)
T ss_dssp CHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTT
T ss_pred hhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhcccccccccccc
Confidence 0 000000 000 000000
Q ss_pred HhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHH
Q 002209 818 VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (953)
Q Consensus 818 ~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 888 (953)
...+....+.++++|+|+++|++|..+| .+...++.+.+.. ++++++++ ||... .++.+.+.+
T Consensus 219 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~----~~~~~~~g-gH~~~-~e~p~~~~~ 281 (286)
T 3qit_A 219 GRSQYLEMLKSIQVPTTLVYGDSSKLNR--PEDLQQQKMTMTQ----AKRVFLSG-GHNLH-IDAAAALAS 281 (286)
T ss_dssp HHHHHHHHHHHCCSCEEEEEETTCCSSC--HHHHHHHHHHSTT----SEEEEESS-SSCHH-HHTHHHHHH
T ss_pred chhHHHHHHhccCCCeEEEEeCCCcccC--HHHHHHHHHHCCC----CeEEEeeC-CchHh-hhChHHHHH
Confidence 1111222345689999999999999998 8888887776643 48999999 99763 334434333
No 201
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.60 E-value=2.5e-13 Score=149.06 Aligned_cols=265 Identities=10% Similarity=0.088 Sum_probs=166.6
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|||||+.|+... ....|.++|+.+++........... +..++|+|||+.|+...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s---------~Dg~v~iWd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~s~~------ 116 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSAS---------QDGKLIIWDSYTTNKVHAIPLRSSW----VMTCAYAPSGNYVACGG------ 116 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE---------TTTEEEEEETTTCCEEEEEECSSSC----EEEEEECTTSSEEEEEE------
T ss_pred CceEEEEECCCCCEEEEEe---------CCCcEEEEECCCCCcceEeecCCcc----EEEEEECCCCCEEEEEe------
Confidence 4688899999999988755 2567888898887654433322222 67899999999998761
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-----eeEeCCC-CcccccccCC
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-----VKEIGPP-AVYTSLDPSP 341 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-----~~~l~~~-~~~~~~~~Sp 341 (953)
..+.+.++++ +++ .+.+... +.+....|++
T Consensus 117 -------------------------------------------~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 117 -------------------------------------------LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153 (340)
T ss_dssp -------------------------------------------TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE
T ss_pred -------------------------------------------CCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC
Confidence 1134555565 331 1223333 6677888999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~ 420 (953)
|++ |+..+.+ +.|.+||+..+... .+..+. ..+..++|+|||+.++..
T Consensus 154 ~~~-l~s~s~d-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~l~sg---- 202 (340)
T 1got_B 154 DNQ-IVTSSGD-------------TTCALWDIETGQQTTTFTGHT-------------GDVMSLSLAPDTRLFVSG---- 202 (340)
T ss_dssp TTE-EEEEETT-------------SCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTSSEEEEE----
T ss_pred CCc-EEEEECC-------------CcEEEEECCCCcEEEEEcCCC-------------CceEEEEECCCCCEEEEE----
Confidence 987 5555533 38999999865533 333221 335679999999865544
Q ss_pred cCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeec
Q 002209 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (953)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 500 (953)
+..+.+.+||+ .++.....+..+...+..++|+|||+.|+..+.++ .+.++|+.++ +......
T Consensus 203 ---------~~d~~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~----~v~iwd~~~~--~~~~~~~ 265 (340)
T 1got_B 203 ---------ACDASAKLWDV--REGMCRQTFTGHESDINAICFFPNGNAFATGSDDA----TCRLFDLRAD--QELMTYS 265 (340)
T ss_dssp ---------ETTSCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTT--EEEEEEC
T ss_pred ---------eCCCcEEEEEC--CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC----cEEEEECCCC--cEEEEEc
Confidence 44568899996 23333344556667788899999999988876544 3444555543 2222221
Q ss_pred CC--CccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceee
Q 002209 501 RS--SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (953)
Q Consensus 501 ~~--~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~ 578 (953)
.. ...+.. +.|+|||++|+....+ ..+++||+.+++......+... .
T Consensus 266 ~~~~~~~v~~------~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~~~~~h~~----~ 314 (340)
T 1got_B 266 HDNIICGITS------VSFSKSGRLLLAGYDD---------------------FNCNVWDALKADRAGVLAGHDN----R 314 (340)
T ss_dssp CTTCCSCEEE------EEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECCSS----C
T ss_pred cCCcccceEE------EEECCCCCEEEEECCC---------------------CeEEEEEcccCcEeeEeecCCC----c
Confidence 11 111222 7899999999887632 2499999987776544333221 1
Q ss_pred eEeeccCCccccccccCCEEEEE
Q 002209 579 TVALMSDQTEGDLYLNQLKILTS 601 (953)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~ 601 (953)
+.. .+|++||..++..
T Consensus 315 v~~-------~~~s~dg~~l~s~ 330 (340)
T 1got_B 315 VSC-------LGVTDDGMAVATG 330 (340)
T ss_dssp EEE-------EEECTTSSCEEEE
T ss_pred EEE-------EEEcCCCCEEEEE
Confidence 121 3688888866643
No 202
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.60 E-value=3.7e-14 Score=157.70 Aligned_cols=248 Identities=15% Similarity=0.127 Sum_probs=151.0
Q ss_pred ceEEEEEEcCC--CcE--EEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCc--CCCCcccCCCCCCC----CccchHHHH
Q 002209 638 QKELIKYQRKD--GVQ--LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSK--DAAGQVRGSPNEFP----RIGSTSVLL 707 (953)
Q Consensus 638 ~~~~~~~~~~d--g~~--~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~ 707 (953)
...++.|.+.| |.. +.+.++.|.+.. .+.|+|.|.||-..... .++.....+...-. .+.......
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~ 149 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG 149 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence 45667776554 543 788999998632 24899999999532110 00000111100000 011123455
Q ss_pred H-HHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEEEeChHHHHHHHHHHhC----C
Q 002209 708 W-LARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVA-HPSKIAVGGHSYGAFMTANLLAHA----P 781 (953)
Q Consensus 708 l-a~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~-d~~~i~l~G~S~GG~~a~~~a~~~----p 781 (953)
| +++||+|+.+|+ .|.|..+.........+.|.++++..+. .+ ...+++++|||+||..+++++... |
T Consensus 150 ~~l~~G~~Vv~~Dy---~G~G~~y~~~~~~~~~vlD~vrAa~~~~---~~~~~~~v~l~G~S~GG~aal~aa~~~~~yap 223 (462)
T 3guu_A 150 WALQQGYYVVSSDH---EGFKAAFIAGYEEGMAILDGIRALKNYQ---NLPSDSKVALEGYSGGAHATVWATSLAESYAP 223 (462)
T ss_dssp HHHHTTCEEEEECT---TTTTTCTTCHHHHHHHHHHHHHHHHHHT---TCCTTCEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred HHHhCCCEEEEecC---CCCCCcccCCcchhHHHHHHHHHHHHhc---cCCCCCCEEEEeeCccHHHHHHHHHhChhhcC
Confidence 7 899999999555 5666554433322234445555544443 23 247999999999999999988754 3
Q ss_pred C-cccEEEEcccCCCCCCC-------Cc-C------------ccc----------------------c------------
Q 002209 782 H-LFCCGIARSGAYNRTLT-------PF-G------------FQN----------------------E------------ 806 (953)
Q Consensus 782 ~-~~~a~v~~~~~~d~~~~-------~~-~------------~~~----------------------~------------ 806 (953)
+ .++++++.++++|.... .+ + ++. .
T Consensus 224 el~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~ 303 (462)
T 3guu_A 224 ELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYP 303 (462)
T ss_dssp TSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCT
T ss_pred ccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhc
Confidence 3 58888888876652100 00 0 000 0
Q ss_pred ----c-----chhhhh---HHHHHhcCccc-----ccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEE
Q 002209 807 ----D-----RTLWEA---TSTYVEMSPFM-----SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (953)
Q Consensus 807 ----~-----~~~~~~---~~~~~~~sp~~-----~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (953)
. ..+... .+.+.+...-. -..+++.|+||+||.+|.+|| +.+++++++++++.|.+++++.
T Consensus 304 ~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP--~~~s~~l~~~l~~~G~~V~~~~ 381 (462)
T 3guu_A 304 FLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVP--YQPAATYVKEQCAKGANINFSP 381 (462)
T ss_dssp TCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCC--HHHHHHHHHHHHHcCCCeEEEE
Confidence 0 000000 01111111100 123567899999999999999 9999999999999999999999
Q ss_pred eCCCCccCCCcccHHHHHHHHHHHHHHhccCC
Q 002209 870 LPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (953)
Q Consensus 870 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (953)
|++++|.... ...+..+++||++++...
T Consensus 382 y~~~~H~~~~----~~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 382 YPIAEHLTAE----IFGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp ESSCCHHHHH----HHTHHHHHHHHHHHHHTC
T ss_pred ECcCCccCch----hhhHHHHHHHHHHHhCCC
Confidence 9999998642 223678899999998754
No 203
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.60 E-value=1.1e-14 Score=152.71 Aligned_cols=198 Identities=9% Similarity=-0.035 Sum_probs=130.1
Q ss_pred cEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh---hhHHHHHHHHHHHH
Q 002209 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAV 747 (953)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~~ 747 (953)
|+||++||..... ..| ......|+++||.|++ ++.+|+|.+.... ......++|+.+.+
T Consensus 5 ~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 66 (258)
T 3dqz_A 5 HHFVLVHNAYHGA-----------WIW----YKLKPLLESAGHRVTA---VELAASGIDPRPIQAVETVDEYSKPLIETL 66 (258)
T ss_dssp CEEEEECCTTCCG-----------GGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSSCGGGCCSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcc-----------ccH----HHHHHHHHhCCCEEEE---ecCCCCcCCCCCCCccccHHHhHHHHHHHH
Confidence 8899999964211 112 1345678889999999 4556777775421 23555666666655
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcC-------------cccccc------
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-------------FQNEDR------ 808 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~-------------~~~~~~------ 808 (953)
+.+ . . .+++.|+||||||.+++.++.++|++++++|++++.......... ......
T Consensus 67 ~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T 3dqz_A 67 KSL---P-E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRN 141 (258)
T ss_dssp HTS---C-T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETT
T ss_pred HHh---c-c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhc
Confidence 544 2 1 268999999999999999999999999999999885432111100 000000
Q ss_pred ---------h-----------hhhhHHHH--------------HhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHH
Q 002209 809 ---------T-----------LWEATSTY--------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (953)
Q Consensus 809 ---------~-----------~~~~~~~~--------------~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~ 854 (953)
. ..+....+ ............++|+|+++|++|..+| ++.++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~ 219 (258)
T 3dqz_A 142 GTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIP--CDFIRWM 219 (258)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHHHHH
T ss_pred cChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeC--HHHHHHH
Confidence 0 00000000 0011222222236899999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
.+.+.. .+++++|++||... .+..+.+.+.+.+|+++|+
T Consensus 220 ~~~~~~----~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 220 IDNFNV----SKVYEIDGGDHMVM-LSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HHHSCC----SCEEEETTCCSCHH-HHSHHHHHHHHHHHHHHTC
T ss_pred HHhCCc----ccEEEcCCCCCchh-hcChHHHHHHHHHHHHHhC
Confidence 777643 37889999999864 5677888999999999874
No 204
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.60 E-value=1.8e-13 Score=145.60 Aligned_cols=281 Identities=9% Similarity=0.068 Sum_probs=190.1
Q ss_pred eEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCC
Q 002209 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (953)
Q Consensus 194 ~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 273 (953)
-.++.||++|+|.... +...||.++.+|+..++|+... .--++++|++|+|+.......
T Consensus 19 g~~~~~g~~iy~~n~~-------d~~~ly~~~~dg~~~~~l~~~~---------~~~i~~~g~~Iyy~~~~~~~~----- 77 (302)
T 3s25_A 19 GLFCESDGEVFFSNTN-------DNGRLYAMNIDGSNIHKLSNDT---------AMYINADKNYVYYVRNNNQKI----- 77 (302)
T ss_dssp TCEEEETTEEEEEEGG-------GTTEEEEEETTSCSCEEEEEEE---------EEEEEECSSEEEEEEECC--------
T ss_pred eEEEEeCCEEEEEeCC-------CCceEEEEcCCCCCCEEccCCc---------eeeEEEcCCEEEEEECCCCcc-----
Confidence 3567899999997642 2578999999999998886522 123579999999993321100
Q ss_pred CCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCCCcccccccCCCCcEEEEEEec
Q 002209 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIH 352 (953)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~~~~~~~SpDG~~l~~~~~~ 352 (953)
+...+-......|+++++ +++.+.|.... ...|+++|++|+|+...
T Consensus 78 ------------------------------~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~---~~~~s~~g~~Iy~~~~~ 124 (302)
T 3s25_A 78 ------------------------------TSQTFFSYDRNSLCRIKRNGHGSTVLDPDP---CIYASLIGNYIYYLHYD 124 (302)
T ss_dssp ---------------------------------CCSSCCSEEEEEEETTSCCCEEEECSC---EEEEEEETTEEEEEEES
T ss_pred ------------------------------cccceeccCCCeEEEEeCCCCcceEeecCC---ccEEEEeCCEEEEEeec
Confidence 000000012457999999 55666776542 22789999999998721
Q ss_pred CCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccC
Q 002209 353 RPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR 432 (953)
Q Consensus 353 ~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~ 432 (953)
.. ....|+.++++|+..++|+.... ..|+++|+.|+|.. .+.
T Consensus 125 ~~---------~~~~Iy~~~~dGs~~~~lt~~~~-----------------~~~~~~g~~iy~t~------------~g~ 166 (302)
T 3s25_A 125 TQ---------TATSLYRIRIDGEEKKKIKNHYL-----------------FTCNTSDRYFYYNN------------PKN 166 (302)
T ss_dssp SS---------SCEEEEEEETTSCCCEEEESSCC-----------------CCSEEETTEEEEEC------------TTT
T ss_pred CC---------CCceEEEEECCCCCeEEEeCCCc-----------------eEeeEECCEEEEEe------------CCC
Confidence 10 12389999999988888887431 34788999877761 135
Q ss_pred CeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCC
Q 002209 433 DIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGS 512 (953)
Q Consensus 433 ~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (953)
.+|+++++ +|+..++|..... ..+ ++|+|++|+|..+.+. .+|+++++++. ..+++++...
T Consensus 167 ~~Iy~~~l---~g~~~~~l~~~~~--~~~-~~P~g~~iy~t~~~~~--~~I~~~~ldG~--~~~~Lt~~~~--------- 227 (302)
T 3s25_A 167 GQLYRYDT---ASQSEALFYDCNC--YKP-VVLDDTNVYYMDVNRD--NAIVHVNINNP--NPVVLTEANI--------- 227 (302)
T ss_dssp CCEEEEET---TTTEEEEEECSCE--EEE-EEEETTEEEEEEGGGT--TEEEEECSSSC--CCEECSCSCE---------
T ss_pred ceEEEEEC---CCCCEEEEeCCCc--cce-eeecCCEEEEEEcCCC--cEEEEEECCCC--CeEEEeCCCc---------
Confidence 68999996 7777677754322 223 5699999999887654 48999999985 4566654321
Q ss_pred CCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCcccccc
Q 002209 513 PMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLY 592 (953)
Q Consensus 513 p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s 592 (953)
..|+|+|++|+|.... ....|+.+++++...++|...... .++
T Consensus 228 --~~~~~~g~~Iy~~~~~-------------------~~~~i~~~~~DG~~r~~l~~~~~~----------------~i~ 270 (302)
T 3s25_A 228 --EHYNVYGSLIFYQRGG-------------------DNPALCVVKNDGTGFKELAKGEFC----------------NIN 270 (302)
T ss_dssp --EEEEEETTEEEEEECS-------------------SSCEEEEEETTSCCCEEEEESCEE----------------EEE
T ss_pred --ceEEECCCEEEEEECC-------------------CCcEEEEEECCCCccEEeeCCccc----------------eEE
Confidence 4589999999887521 124799999999888888765411 234
Q ss_pred ccCCEEEEEEecCCCCceEEEEECCCCCeeEEe
Q 002209 593 LNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (953)
Q Consensus 593 ~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~Lt 625 (953)
+-+..++|+..... .|+++.+.+...++|.
T Consensus 271 i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 271 VTSQYVYFTDFVSN---KEYCTSTQNPDTIKAL 300 (302)
T ss_dssp ECSSEEEEEETTTC---CEEEEESSSCCSCEEC
T ss_pred EeCCEEEEEECCCC---eEEEEECCCCCceEec
Confidence 55778888765433 3888887666666654
No 205
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.60 E-value=5.7e-15 Score=156.78 Aligned_cols=197 Identities=10% Similarity=0.054 Sum_probs=130.7
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh----h--hHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND----R--FVEQLVACA 743 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~----~--~~~~~~~D~ 743 (953)
.|+||++||..... ..|. .....|++ ||.|++ .+.+|+|.+.... . ......+|+
T Consensus 28 ~~~vv~lHG~~~~~-----------~~~~----~~~~~l~~-g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 88 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQ-----------NMWR----FMLPELEK-QFTVIV---FDYVGSGQSDLESFSTKRYSSLEGYAKDV 88 (282)
T ss_dssp SCEEEEECCTTCCG-----------GGGT----TTHHHHHT-TSEEEE---CCCTTSTTSCGGGCCTTGGGSHHHHHHHH
T ss_pred CCeEEEECCCCCCc-----------chHH----HHHHHHhc-CceEEE---EecCCCCCCCCCCCCccccccHHHHHHHH
Confidence 38899999963211 1121 22445555 999999 5556777775432 1 345566666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccc-c--------------c
Q 002209 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-D--------------R 808 (953)
Q Consensus 744 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~-~--------------~ 808 (953)
.++++.+ +.+++.|+|||+||.+++.++.++|++++++|+++|..........+... . .
T Consensus 89 ~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 3qvm_A 89 EEILVAL------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNY 162 (282)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcch
Confidence 6665554 34689999999999999999999999999999999864321110000000 0 0
Q ss_pred hhh------------------h----------------hHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHH
Q 002209 809 TLW------------------E----------------ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (953)
Q Consensus 809 ~~~------------------~----------------~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~ 854 (953)
..| . ....+...+....+.++++|+|+++|++|..+| ++.+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~ 240 (282)
T 3qvm_A 163 IGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS--PEVGQYM 240 (282)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCC--HHHHHHH
T ss_pred hhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCC--HHHHHHH
Confidence 000 0 000111123335567889999999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
.+.+. ..++++++++||... .+....+.+.+.+||++..
T Consensus 241 ~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 241 AENIP----NSQLELIQAEGHCLH-MTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHC-
T ss_pred HHhCC----CCcEEEecCCCCccc-ccCHHHHHHHHHHHHHhcC
Confidence 77663 359999999999864 4557788889999998753
No 206
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.60 E-value=5e-15 Score=153.66 Aligned_cols=195 Identities=11% Similarity=0.066 Sum_probs=127.4
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhh-hHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR-FVEQLVACAEAAVE 748 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~-~~~~~~~D~~~~~~ 748 (953)
.|+||++||...... .|. ....|+ +||.|+.+|. +|+|.+..... ......+|+.++++
T Consensus 16 ~~~vv~~hG~~~~~~-----------~~~-----~~~~l~-~g~~v~~~d~---~g~g~s~~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e0x_A 16 PNTLLFVHGSGCNLK-----------IFG-----ELEKYL-EDYNCILLDL---KGHGESKGQCPSTVYGYIDNVANFIT 75 (245)
T ss_dssp SCEEEEECCTTCCGG-----------GGT-----TGGGGC-TTSEEEEECC---TTSTTCCSCCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHH-----------HHH-----HHHHHH-hCCEEEEecC---CCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 689999999642211 111 122233 8999999554 57776643322 35666777777764
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCcccEEEEcccCCCCCCCCcCccc----------------------
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTLTPFGFQN---------------------- 805 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~d~~~~~~~~~~---------------------- 805 (953)
+...+...+ ++.|+|||+||.+++.++.+ +|+ ++++|+++|.............
T Consensus 76 ~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T 3e0x_A 76 NSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNP 152 (245)
T ss_dssp HCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSH
T ss_pred hhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchH
Confidence 443333334 99999999999999999999 999 9999999987654111000000
Q ss_pred -----------ccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 002209 806 -----------EDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFES 874 (953)
Q Consensus 806 -----------~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 874 (953)
...............+....+.++++|+|+++|++|..+| ++.+.++++.++ .+++++++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~g 226 (245)
T 3e0x_A 153 LSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTL--VEYSEIIKKEVE----NSELKIFETGK 226 (245)
T ss_dssp HHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHSS----SEEEEEESSCG
T ss_pred HHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCC--HHHHHHHHHHcC----CceEEEeCCCC
Confidence 0000011112223345556678899999999999999998 888888877764 36999999999
Q ss_pred ccCCCcccHHHHHHHHHHHH
Q 002209 875 HGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl 894 (953)
|... .++...+.+.+.+||
T Consensus 227 H~~~-~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 227 HFLL-VVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGHH-HHTHHHHHHHHHTTC
T ss_pred cceE-EecHHHHHHHHHhhC
Confidence 9863 344555666665553
No 207
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.59 E-value=2.1e-14 Score=159.43 Aligned_cols=179 Identities=14% Similarity=0.069 Sum_probs=120.2
Q ss_pred HHHcCcEEEEcCCCCCCCCCChhhh---------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEEeChHHH
Q 002209 708 WLARGFAILGGPTTPIIGEGDEEAN---------------DRFVEQLVACAEAAVEEVVRRGVAHPSKI-AVGGHSYGAF 771 (953)
Q Consensus 708 la~~G~~V~~~~~~~~~G~G~~~~~---------------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~ 771 (953)
|+++||.|+++|.+|. ++|.+... .......++|+.++++.+ +.+++ .|+||||||.
T Consensus 85 l~~~g~~vi~~D~~G~-~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ 157 (366)
T 2pl5_A 85 FDTNQYFIICSNVIGG-CKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL------GIEKLFCVAGGSMGGM 157 (366)
T ss_dssp EETTTCEEEEECCTTC-SSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEEETHHHH
T ss_pred ccccccEEEEecCCCc-ccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc------CCceEEEEEEeCccHH
Confidence 4578999999666431 04544221 113456666666666543 34688 7999999999
Q ss_pred HHHHHHHhCCCcccEEEEcccCCCCCCCC----------------cC---c-----------------------------
Q 002209 772 MTANLLAHAPHLFCCGIARSGAYNRTLTP----------------FG---F----------------------------- 803 (953)
Q Consensus 772 ~a~~~a~~~p~~~~a~v~~~~~~d~~~~~----------------~~---~----------------------------- 803 (953)
+++.++.++|++++++|++++........ +. +
T Consensus 158 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (366)
T 2pl5_A 158 QALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREK 237 (366)
T ss_dssp HHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHH
T ss_pred HHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHH
Confidence 99999999999999999998865421000 00 0
Q ss_pred -----cc-------cc-ch--------------h---hhhHHHHHhcCc------ccccCCCCCcEEEEEeCCCCCCCCc
Q 002209 804 -----QN-------ED-RT--------------L---WEATSTYVEMSP------FMSANKLKKPILLVHGEEDNNSGTL 847 (953)
Q Consensus 804 -----~~-------~~-~~--------------~---~~~~~~~~~~sp------~~~~~~i~~P~Li~~G~~D~~v~~~ 847 (953)
.. .. .. . ......+...+. ...+.++++|+|+++|++|..+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-- 315 (366)
T 2pl5_A 238 FGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYP-- 315 (366)
T ss_dssp HTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC--
T ss_pred hhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccC--
Confidence 00 00 00 0 000011111111 12567889999999999999998
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEe-CCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 848 TMQSDRFFNALKGHGALCRLVIL-PFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 848 ~~~~~~~~~~l~~~g~~~~~~~~-~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
++.+.++++.+...+..++++++ +++||... .+....+.+.+.+||++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 316 PAQSREIVKSLEAADKRVFYVELQSGEGHDSF-LLKNPKQIEILKGFLEN 364 (366)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG-GSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhcccCeEEEEeCCCCCcchh-hcChhHHHHHHHHHHcc
Confidence 99999999999877666899999 89999874 34556788888899875
No 208
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.59 E-value=7.5e-15 Score=158.66 Aligned_cols=216 Identities=14% Similarity=0.055 Sum_probs=134.0
Q ss_pred EEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcC
Q 002209 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (953)
Q Consensus 640 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~ 719 (953)
+...+.. +|..+..+.+-|+ ..|+||++||+.... ..|. .....|++ ||.|+++|
T Consensus 46 ~~~~v~~-~~~~~~~~~~g~~--------~~~~vv~lHG~~~~~-----------~~~~----~~~~~L~~-g~~vi~~D 100 (306)
T 2r11_A 46 KSFYIST-RFGQTHVIASGPE--------DAPPLVLLHGALFSS-----------TMWY----PNIADWSS-KYRTYAVD 100 (306)
T ss_dssp EEEEECC-TTEEEEEEEESCT--------TSCEEEEECCTTTCG-----------GGGT----TTHHHHHH-HSEEEEEC
T ss_pred ceEEEec-CCceEEEEeeCCC--------CCCeEEEECCCCCCH-----------HHHH----HHHHHHhc-CCEEEEec
Confidence 4444443 5557766664332 257899999964211 1121 22445665 99999955
Q ss_pred CCCCCCC-CChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 720 TTPIIGE-GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 720 ~~~~~G~-G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
. +|+ |.+... .........|+.++++.+ +.+++.|+|||+||.+++.++.++|++++++|+++|....
T Consensus 101 ~---~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (306)
T 2r11_A 101 I---IGDKNKSIPENVSGTRTDYANWLLDVFDNL------GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETF 171 (306)
T ss_dssp C---TTSSSSCEECSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBT
T ss_pred C---CCCCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCcccc
Confidence 5 566 555332 223455666666665553 2368999999999999999999999999999999987653
Q ss_pred CCCCcCc-----ccc-----------------cc-hhhhhHHHH-Hh-----------------cCcccccCCCCCcEEE
Q 002209 797 TLTPFGF-----QNE-----------------DR-TLWEATSTY-VE-----------------MSPFMSANKLKKPILL 835 (953)
Q Consensus 797 ~~~~~~~-----~~~-----------------~~-~~~~~~~~~-~~-----------------~sp~~~~~~i~~P~Li 835 (953)
....... ... .. ......... .. ......+.++++|+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 251 (306)
T 2r11_A 172 LPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILL 251 (306)
T ss_dssp SCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEE
T ss_pred CcccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEE
Confidence 2111000 000 00 000000000 00 0111234567899999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 836 ~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
++|++|..+| +..+.++++.+. ..+++++++++||... .+....+.+.+.+||+
T Consensus 252 i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 252 LLGEHEVIYD--PHSALHRASSFV---PDIEAEVIKNAGHVLS-MEQPTYVNERVMRFFN 305 (306)
T ss_dssp EEETTCCSSC--HHHHHHHHHHHS---TTCEEEEETTCCTTHH-HHSHHHHHHHHHHHHC
T ss_pred EEeCCCcccC--HHHHHHHHHHHC---CCCEEEEeCCCCCCCc-ccCHHHHHHHHHHHHh
Confidence 9999999998 887776665442 2368999999999763 4556777788888874
No 209
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.59 E-value=6.8e-13 Score=144.92 Aligned_cols=275 Identities=11% Similarity=0.025 Sum_probs=167.7
Q ss_pred cceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhh
Q 002209 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (953)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (953)
...|+++|+.+++.......+... .....++|+|||+.++++..
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~---------------------------------- 53 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAG--PTPMVPMVAPGGRIAYATVN---------------------------------- 53 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCT--TCCCCEEECTTSSEEEEEET----------------------------------
T ss_pred CCeEEEEECCCCcEEEEEEcCCCC--CCccceEEcCCCCEEEEEeC----------------------------------
Confidence 568999999988765544333210 00457899999998887610
Q ss_pred hcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCCC------cccccccCCCCcEEEEEEecCCccccccCCC--CCcc
Q 002209 298 LLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPA------VYTSLDPSPDEKYILISSIHRPYSFIVPCGR--FPRQ 367 (953)
Q Consensus 298 ~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~~------~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~--~~~~ 367 (953)
....|+++|+ +++.. .+.... .+..++|||||++|++....... .+... ....
T Consensus 54 --------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~~~~~~ 116 (337)
T 1pby_B 54 --------------KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL---ELTHFEVQPTR 116 (337)
T ss_dssp --------------TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE---CSSCEEECCCE
T ss_pred --------------CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc---ccccccccCce
Confidence 2246889998 77644 343222 56789999999999888522100 00000 1348
Q ss_pred eEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC
Q 002209 368 VGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG 447 (953)
Q Consensus 368 i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~ 447 (953)
|++||+++++........ ..+..++|+|||+.+++. .+.++++|+ .+++
T Consensus 117 i~v~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~l~~~---------------~~~i~~~d~---~~~~ 165 (337)
T 1pby_B 117 VALYDAETLSRRKAFEAP-------------RQITMLAWARDGSKLYGL---------------GRDLHVMDP---EAGT 165 (337)
T ss_dssp EEEEETTTTEEEEEEECC-------------SSCCCEEECTTSSCEEEE---------------SSSEEEEET---TTTE
T ss_pred EEEEECCCCcEEEEEeCC-------------CCcceeEECCCCCEEEEe---------------CCeEEEEEC---CCCc
Confidence 999999876544322211 123578899999987665 246889996 4444
Q ss_pred ceEEeecccccCCeeeccCCceEEEEEecccC--------------------ceEEEEEcCCCCCCCcEEeec-CCCccc
Q 002209 448 PEILHKLDLRYGGISWCDDSLALVYESWYKTR--------------------RTRTWVISPGSKDVAPRILFD-RSSEDV 506 (953)
Q Consensus 448 ~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~--------------------~~~l~~~d~~~~~~~~~~~~~-~~~~~~ 506 (953)
.............+.|+|||+.|++....... ...|+++|+.++. ...+.. ......
T Consensus 166 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~ 243 (337)
T 1pby_B 166 LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--MAMREVRIMDVFY 243 (337)
T ss_dssp EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--EEEEEEEECSSCE
T ss_pred EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC--ceEeecCCCCCce
Confidence 33222222212456899999987665422211 0157889988752 222211 111111
Q ss_pred cCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCC
Q 002209 507 YSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQ 586 (953)
Q Consensus 507 ~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 586 (953)
.+ +.|+|||++++... ..|++||+++++.......... -
T Consensus 244 ~~------~~~s~dg~~l~~~~-----------------------~~v~~~d~~~~~~~~~~~~~~~------------~ 282 (337)
T 1pby_B 244 FS------TAVNPAKTRAFGAY-----------------------NVLESFDLEKNASIKRVPLPHS------------Y 282 (337)
T ss_dssp EE------EEECTTSSEEEEEE-----------------------SEEEEEETTTTEEEEEEECSSC------------C
T ss_pred ee------EEECCCCCEEEEeC-----------------------CeEEEEECCCCcCcceecCCCc------------e
Confidence 11 78999999987661 1499999998876655443221 1
Q ss_pred ccccccccCCEEEEEEecCCCCceEEEEECCCCCeeE
Q 002209 587 TEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (953)
Q Consensus 587 ~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~ 623 (953)
....|++||+.+++. .. ...++++++.+++...
T Consensus 283 ~~~~~s~dg~~l~~~-~~---~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 283 YSVNVSTDGSTVWLG-GA---LGDLAAYDAETLEKKG 315 (337)
T ss_dssp CEEEECTTSCEEEEE-SB---SSEEEEEETTTCCEEE
T ss_pred eeEEECCCCCEEEEE-cC---CCcEEEEECcCCcEEE
Confidence 124689999977764 22 3679999998887554
No 210
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.59 E-value=3.8e-13 Score=148.01 Aligned_cols=230 Identities=13% Similarity=0.134 Sum_probs=142.2
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCcee--e-cccCCCccccccccceEEecCCeEEEEEecCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR--P-LFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~--~-lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 266 (953)
.+...+|||||+.||.... +..|.++++++++.. . +..... ..+..++|+|||+.|+...
T Consensus 18 ~v~~l~~sp~g~~las~~~---------D~~i~iw~~~~~~~~~~~~~~~~h~----~~v~~~~~sp~g~~l~s~s---- 80 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG---------DRRIRIWGTEGDSWICKSVLSEGHQ----RTVRKVAWSPCGNYLASAS---- 80 (345)
T ss_dssp CEEEEEECTTSSCEEEEET---------TSCEEEEEEETTEEEEEEEECSSCS----SCEEEEEECTTSSEEEEEE----
T ss_pred cEEEEEECCCCCEEEEEcC---------CCeEEEEEcCCCcceeeeeeccccC----CcEEEEEECCCCCEEEEEE----
Confidence 5778999999999998652 445666676666432 1 212122 2277899999999998762
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc---eeEeCCC-CcccccccCC
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDPSP 341 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~Sp 341 (953)
..+.+.++++ .+. ...+... ..+..++|+|
T Consensus 81 ---------------------------------------------~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 81 ---------------------------------------------FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp ---------------------------------------------TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred ---------------------------------------------CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence 1123334444 332 3344444 7788999999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~ 420 (953)
||++|+..+.+. .|.+||++.+. ...+.... +....+..++|+|||+.|+..
T Consensus 116 ~~~~l~s~s~D~-------------~v~iwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~l~s~---- 168 (345)
T 3fm0_A 116 SGNLLATCSRDK-------------SVWVWEVDEEDEYECVSVLN----------SHTQDVKHVVWHPSQELLASA---- 168 (345)
T ss_dssp TSSEEEEEETTS-------------CEEEEEECTTSCEEEEEEEC----------CCCSCEEEEEECSSSSCEEEE----
T ss_pred CCCEEEEEECCC-------------eEEEEECCCCCCeEEEEEec----------CcCCCeEEEEECCCCCEEEEE----
Confidence 999999887443 89999997542 22222111 111345679999999977665
Q ss_pred cCCCcccccccCCeEEEEecCCCCCCCc---eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCc--
Q 002209 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP-- 495 (953)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~d~~~~~g~~~---~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~-- 495 (953)
+..+.+.+|+. ..++. ..+..+...+..++|+|||+.|+..+.++. .+||.....+.....
T Consensus 169 ---------s~d~~i~~w~~---~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~--v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 169 ---------SYDDTVKLYRE---EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT--VRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp ---------ETTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEEEEECTTCTTCCCC
T ss_pred ---------eCCCcEEEEEe---cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe--EEEeccccCCCCcccee
Confidence 34556778875 33322 234455667788999999999988776553 478876443321100
Q ss_pred -------E---EeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 496 -------R---ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 496 -------~---~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
. .+.......++. ++|+|++..|+...
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~------v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYD------IAWCQLTGALATAC 271 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEE------EEECTTTCCEEEEE
T ss_pred eccCCccceeEEecCCCCCcEEE------EEEecCCCEEEEEe
Confidence 0 011112222333 78999999888766
No 211
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.59 E-value=9.3e-15 Score=154.01 Aligned_cols=196 Identities=15% Similarity=0.131 Sum_probs=128.8
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh----hh--hHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN----DR--FVEQLVACA 743 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~----~~--~~~~~~~D~ 743 (953)
.|+||++||..... ..|. .....|++ ||.|+++| .+|+|.+... .. .....++|+
T Consensus 20 ~p~vv~~HG~~~~~-----------~~~~----~~~~~l~~-g~~v~~~D---~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 20 ERVLVLAHGFGTDQ-----------SAWN----RILPFFLR-DYRVVLYD---LVCAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp SSEEEEECCTTCCG-----------GGGT----TTGGGGTT-TCEEEEEC---CTTSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred CCEEEEEeCCCCcH-----------HHHH----HHHHHHhC-CcEEEEEc---CCCCCCCCCCCCCccccCcHHHHHHHH
Confidence 58999999964221 1121 12234555 99999954 4677777431 11 245666676
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-c--Cccccc-----------ch
Q 002209 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-F--GFQNED-----------RT 809 (953)
Q Consensus 744 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~-~--~~~~~~-----------~~ 809 (953)
.++++.+ +.+++.|+||||||.+++.++.++|++++++|++++........ + .+.... ..
T Consensus 81 ~~~~~~~------~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 81 LHILDAL------GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhc------CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHH
Confidence 6666554 34589999999999999999999999999999999864321110 0 000000 00
Q ss_pred hh-----------------h----------------hHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHH
Q 002209 810 LW-----------------E----------------ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFN 856 (953)
Q Consensus 810 ~~-----------------~----------------~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~ 856 (953)
.| . ....+...+....+.++++|+|+++|++|..+| +..+.++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~ 232 (269)
T 4dnp_A 155 AWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVP--ASVATYLKN 232 (269)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBC--HHHHHHHHH
T ss_pred HHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccC--HHHHHHHHH
Confidence 00 0 001111223445677889999999999999998 888888877
Q ss_pred HHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 857 ALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 857 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
.+... +++++++++||... .+..+.+.+.+.+||++
T Consensus 233 ~~~~~---~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 233 HLGGK---NTVHWLNIEGHLPH-LSAPTLLAQELRRALSH 268 (269)
T ss_dssp HSSSC---EEEEEEEEESSCHH-HHCHHHHHHHHHHHHC-
T ss_pred hCCCC---ceEEEeCCCCCCcc-ccCHHHHHHHHHHHHhh
Confidence 76442 79999999999863 45667778888888765
No 212
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.59 E-value=3.6e-13 Score=149.33 Aligned_cols=205 Identities=12% Similarity=0.076 Sum_probs=126.3
Q ss_pred cccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCC
Q 002209 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (953)
Q Consensus 333 ~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~ 412 (953)
.+..++|||||++|++.+.. ..+.|.+||+.++.......+. ..+.+++|||||+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~-----------~d~~i~iwd~~~~~~~~~~~~~-------------~~V~~v~fspdg~~ 190 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSK-----------VPAIMRIIDPSDLTEKFEIETR-------------GEVKDLHFSTDGKV 190 (365)
T ss_dssp CEEEEEECTTSSCEEEEESC-----------SSCEEEEEETTTTEEEEEEECS-------------SCCCEEEECTTSSE
T ss_pred CEEEEEEcCCCCEEEEEECC-----------CCCEEEEeECCCCcEEEEeCCC-------------CceEEEEEccCCce
Confidence 45678999999999887632 2348999999866544332221 23568999999997
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEE--eecccccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL--HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l--~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
++.. + .+.+.+++. .++...... ..+...+..++|+|||+.++..+..+.....++.++...
T Consensus 191 l~s~-------------s-~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 191 VAYI-------------T-GSSLEVIST--VTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp EEEE-------------C-SSCEEEEET--TTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET
T ss_pred EEec-------------c-ceeEEEEEe--ccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc
Confidence 7765 2 334556663 233322222 223455678999999999998876655444566666554
Q ss_pred CCCCcE--EeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEE-
Q 002209 491 KDVAPR--ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERI- 567 (953)
Q Consensus 491 ~~~~~~--~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l- 567 (953)
...... .........+.. +.|||||++|+....+. .+++||+.+++...-
T Consensus 255 ~~~~~~~~~~~~~~~~~V~~------~~~Spdg~~lasgs~D~---------------------~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRFKGITS------MDVDMKGELAVLASNDN---------------------SIALVKLKDLSMSKIF 307 (365)
T ss_dssp TEEEEEEEEEEESSCSCEEE------EEECTTSCEEEEEETTS---------------------CEEEEETTTTEEEEEE
T ss_pred ceecceeeeeecCCCCCeEe------EEECCCCCceEEEcCCC---------------------EEEEEECCCCcEEEEe
Confidence 311111 112222222333 78999999999876422 399999998876543
Q ss_pred eccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002209 568 WESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (953)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g 619 (953)
..+... .+.. .+|||||+.|+- .+.. ..|.+++++..
T Consensus 308 ~~gH~~----~V~~-------v~fSpdg~~laS-~S~D---~tvrvw~ip~~ 344 (365)
T 4h5i_A 308 KQAHSF----AITE-------VTISPDSTYVAS-VSAA---NTIHIIKLPLN 344 (365)
T ss_dssp TTSSSS----CEEE-------EEECTTSCEEEE-EETT---SEEEEEECCTT
T ss_pred cCcccC----CEEE-------EEECCCCCEEEE-EeCC---CeEEEEEcCCC
Confidence 232211 1222 479999997663 3332 35788887543
No 213
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.59 E-value=7.7e-15 Score=157.17 Aligned_cols=197 Identities=16% Similarity=0.154 Sum_probs=131.8
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhh-hHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR-FVEQLVACAEAAVE 748 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~-~~~~~~~D~~~~~~ 748 (953)
.|+||++||.+... ..| .......|+++||.|+++|. +|+|.+..... ......+|+.++++
T Consensus 43 ~~~vv~lHG~~~~~-----------~~~---~~~~~~~l~~~g~~vi~~D~---~G~G~s~~~~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 43 GDPVVFIAGRGGAG-----------RTW---HPHQVPAFLAAGYRCITFDN---RGIGATENAEGFTTQTMVADTAALIE 105 (293)
T ss_dssp SEEEEEECCTTCCG-----------GGG---TTTTHHHHHHTTEEEEEECC---TTSGGGTTCCSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCch-----------hhc---chhhhhhHhhcCCeEEEEcc---CCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 57899999964221 111 11235577899999999555 56676654332 35667777777777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCc--------------Ccccc--------
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF--------------GFQNE-------- 806 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~--------------~~~~~-------- 806 (953)
.+ +.+++.|+|||+||.+++.++.++|++++++|++++......... .....
T Consensus 106 ~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (293)
T 3hss_A 106 TL------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL 179 (293)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hc------CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHh
Confidence 76 235899999999999999999999999999999998654211000 00000
Q ss_pred ---cchhhhh-------HHHHH------------------hcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHH
Q 002209 807 ---DRTLWEA-------TSTYV------------------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNAL 858 (953)
Q Consensus 807 ---~~~~~~~-------~~~~~------------------~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l 858 (953)
....... ...+. ..+....+.++++|+|+++|++|..+| ++.+.++.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~ 257 (293)
T 3hss_A 180 ENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTP--PYLGREVADAL 257 (293)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCC--HHHHHHHHHHC
Confidence 0000000 00000 011223457789999999999999998 88888887776
Q ss_pred HhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 859 KGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 859 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
. .+++++++++||... .++.+.+.+.+.+||++
T Consensus 258 ~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 P----NGRYLQIPDAGHLGF-FERPEAVNTAMLKFFAS 290 (293)
T ss_dssp T----TEEEEEETTCCTTHH-HHSHHHHHHHHHHHHHT
T ss_pred C----CceEEEeCCCcchHh-hhCHHHHHHHHHHHHHh
Confidence 3 368999999999863 45667788888888875
No 214
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.59 E-value=5.3e-15 Score=156.67 Aligned_cols=206 Identities=15% Similarity=0.104 Sum_probs=130.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|.++..... + ..|+||++||..... ..|.. ....|++ ||.|+++ +.+|+
T Consensus 10 ~~~~~~~y~~~---g-------~~~~vv~~HG~~~~~-----------~~~~~----~~~~L~~-~~~vi~~---d~~G~ 60 (278)
T 3oos_A 10 TPRGKFEYFLK---G-------EGPPLCVTHLYSEYN-----------DNGNT----FANPFTD-HYSVYLV---NLKGC 60 (278)
T ss_dssp ETTEEEEEEEE---C-------SSSEEEECCSSEECC-----------TTCCT----TTGGGGG-TSEEEEE---CCTTS
T ss_pred cCCceEEEEec---C-------CCCeEEEEcCCCcch-----------HHHHH----HHHHhhc-CceEEEE---cCCCC
Confidence 36667765443 1 146899999964221 11221 1234445 9999994 45677
Q ss_pred CChhhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC--
Q 002209 727 GDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-- 800 (953)
Q Consensus 727 G~~~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~-- 800 (953)
|.+.... .......+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++........
T Consensus 61 G~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~ 134 (278)
T 3oos_A 61 GNSDSAKNDSEYSMTETIKDLEAIREAL------YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHK 134 (278)
T ss_dssp TTSCCCSSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGST
T ss_pred CCCCCCCCcccCcHHHHHHHHHHHHHHh------CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCcccccccccc
Confidence 7775432 22455566666655543 34589999999999999999999999999999999875511000
Q ss_pred ---cCccccc---------------------chh---h-------------------------hhHHHHH-----hcCcc
Q 002209 801 ---FGFQNED---------------------RTL---W-------------------------EATSTYV-----EMSPF 823 (953)
Q Consensus 801 ---~~~~~~~---------------------~~~---~-------------------------~~~~~~~-----~~sp~ 823 (953)
....... ... | .....+. ..+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (278)
T 3oos_A 135 DSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVR 214 (278)
T ss_dssp TSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCH
T ss_pred chhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHH
Confidence 0000000 000 0 0000111 12233
Q ss_pred cccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 824 ~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
..+.++++|+|+++|++|..+| ++.+.++.+.+. .+++++++++||... .++.+.+.+.+.+||
T Consensus 215 ~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 215 QKLKFVKIPSFIYCGKHDVQCP--YIFSCEIANLIP----NATLTKFEESNHNPF-VEEIDKFNQFVNDTL 278 (278)
T ss_dssp HHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHST----TEEEEEETTCSSCHH-HHSHHHHHHHHHHTC
T ss_pred HHHhCCCCCEEEEEeccCCCCC--HHHHHHHHhhCC----CcEEEEcCCcCCCcc-cccHHHHHHHHHhhC
Confidence 4567789999999999999998 888888887763 369999999999863 445666666666653
No 215
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.59 E-value=1.2e-13 Score=154.11 Aligned_cols=279 Identities=11% Similarity=0.059 Sum_probs=170.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+..+.+ +.|.|||+.+ + .....+... ..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D---------------------------------~~v~iWd~~~-~--~~~~~~~~h--~~ 109 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQD---------------------------------GRLIVWNALT-S--QKTHAIKLH--CP 109 (380)
T ss_dssp CEEEEEECTTSSCEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEECC--CT
T ss_pred EEEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--ccceEEecC--CC
Confidence 57788999999999998876 3689999853 2 223334332 24
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce--------eecccCCCccccccccceEEecCCe-EEEE
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFVWVNNST-LLVC 260 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~--------~~lt~~~~~~~~~~~~~~~wspDg~-~l~~ 260 (953)
.+...+|+|||+.|+... ....+.++++.+... +.+..+. ..+..+.|+|++. .|+.
T Consensus 110 ~v~~~~~s~~g~~las~~---------~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~-----~~v~~~~~~~~~~~~l~s 175 (380)
T 3iz6_a 110 WVMECAFAPNGQSVACGG---------LDSACSIFNLSSQADRDGNMPVSRVLTGHK-----GYASSCQYVPDQETRLIT 175 (380)
T ss_dssp TCCCCEECTTSSEEEECC---------SSSCCEEEECCCCSSCCCSSTTCCBCCCCS-----SCCCCCBCCSSSSSCEEE
T ss_pred CEEEEEECCCCCEEEEee---------CCCcEEEEECCCCccccCCccceeeccCCC-----cceEEEEEecCCCCEEEE
Confidence 688899999999998733 244555556544221 1122222 2266788998754 4554
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeC------CC-C
Q 002209 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG------PP-A 332 (953)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~------~~-~ 332 (953)
.. ..+.|.++|+ +|+..... .. .
T Consensus 176 ~s-------------------------------------------------~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 176 GS-------------------------------------------------GDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp EC-------------------------------------------------TTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred EC-------------------------------------------------CCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 41 2245667777 66443221 12 4
Q ss_pred cccccccCC-CCcEEEEEEecCCccccccCCCCCcceEEEecc-Cc-eEEEeccCCCcccCCccccccccCccceeeccC
Q 002209 333 VYTSLDPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (953)
Q Consensus 333 ~~~~~~~Sp-DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~-g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspD 409 (953)
.+..+.|+| |++.|+..+.+. .|.+||+. ++ ..+.+..+ ...+..++|+||
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~-------------~v~~wd~~~~~~~~~~~~~h-------------~~~v~~v~~~p~ 260 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDT-------------TVRLWDLRITSRAVRTYHGH-------------EGDINSVKFFPD 260 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTS-------------CEEEEETTTTCCCCEEECCC-------------SSCCCEEEECTT
T ss_pred CeEEEEeecCCCCEEEEEECCC-------------eEEEEECCCCCcceEEECCc-------------CCCeEEEEEecC
Confidence 566778876 888888776443 89999996 32 23333322 234578999999
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE-Eeecc-------cccCCeeeccCCceEEEEEecccCce
Q 002209 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLD-------LRYGGISWCDDSLALVYESWYKTRRT 481 (953)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~-l~~~~-------~~~~~~~~SpDg~~l~~~~~~~~~~~ 481 (953)
|+.++-. +..+.+.+||+ ..+.... +.... ..+..++|||+|+.|+....++
T Consensus 261 ~~~l~s~-------------s~D~~i~lwd~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg---- 320 (380)
T 3iz6_a 261 GQRFGTG-------------SDDGTCRLFDM---RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG---- 320 (380)
T ss_dssp SSEEEEE-------------CSSSCEEEEET---TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS----
T ss_pred CCeEEEE-------------cCCCeEEEEEC---CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC----
Confidence 9876655 45668899996 3333222 22211 1256789999999988765433
Q ss_pred EEEEEcCCCCCCCcEEee---cCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEE
Q 002209 482 RTWVISPGSKDVAPRILF---DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFD 558 (953)
Q Consensus 482 ~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d 558 (953)
.++++|...+. ....+. ......+.. +.|||||++|+....+. .|.+|+
T Consensus 321 ~i~vwd~~~~~-~~~~~~~~~~~h~~~v~~------l~~s~dg~~l~sgs~D~---------------------~i~iW~ 372 (380)
T 3iz6_a 321 DCYVWDTLLAE-MVLNLGTLQNSHEGRISC------LGLSSDGSALCTGSWDK---------------------NLKIWA 372 (380)
T ss_dssp CEEEEETTTCC-EEEEECCSCSSCCCCCCE------EEECSSSSEEEEECTTS---------------------CEEEEE
T ss_pred CEEEEECCCCc-eEEEEecccCCCCCceEE------EEECCCCCEEEEeeCCC---------------------CEEEEe
Confidence 46666665541 111111 122222222 78999999998776322 388999
Q ss_pred CCCCc
Q 002209 559 INTGS 563 (953)
Q Consensus 559 ~~~~~ 563 (953)
+.+++
T Consensus 373 ~~~~~ 377 (380)
T 3iz6_a 373 FSGHR 377 (380)
T ss_dssp CCSSS
T ss_pred cCCCc
Confidence 87653
No 216
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.59 E-value=1.5e-13 Score=156.90 Aligned_cols=126 Identities=8% Similarity=0.045 Sum_probs=76.5
Q ss_pred CcccccccCCCC-cEEEEEEecCCccccccCCCCCcceEEEeccCceE-----EEeccCCCcccCCccccccccCcccee
Q 002209 332 AVYTSLDPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-----RELCDLPLAEDIPIAFNSVRKGMRSIN 405 (953)
Q Consensus 332 ~~~~~~~~SpDG-~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-----~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (953)
..+..++|+||| +.|+..+.+ +.|.+||+..+.. +.+......... ..+......+..++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~ 292 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSK-------------GTIRLCDMRASALCDRHSKLFEEPEDPSNR-SFFSEIISSISDVK 292 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETT-------------SCEEEEETTTCSSSCTTCEEECCC-----C-CHHHHHTTCEEEEE
T ss_pred cceEEEEECCCCCcEEEEEeCC-------------CeEEEEECcCCccccceeeEeccCCCcccc-ccccccCceEEEEE
Confidence 668899999999 888777744 3899999986542 333332110000 00111112457899
Q ss_pred eccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCC-CCCceEEeecccc---------------cCCeeeccCCce
Q 002209 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLR---------------YGGISWCDDSLA 469 (953)
Q Consensus 406 wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-g~~~~~l~~~~~~---------------~~~~~~SpDg~~ 469 (953)
|+|||+.++.. +. +.|.+||+ .. +.....+..+... ...+.|+|||++
T Consensus 293 ~s~~g~~l~~~-------------~~-~~v~iwd~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~ 356 (447)
T 3dw8_B 293 FSHSGRYMMTR-------------DY-LSVKVWDL--NMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV 356 (447)
T ss_dssp ECTTSSEEEEE-------------ES-SEEEEEET--TCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE
T ss_pred ECCCCCEEEEe-------------eC-CeEEEEeC--CCCccccceeeccccccccccccccccccccceEEEECCCCCE
Confidence 99999977655 34 68999996 22 3333334333221 123899999999
Q ss_pred EEEEEecccCceEEEEEcCCCC
Q 002209 470 LVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
|+..+.++ .|+++|+.++
T Consensus 357 l~s~s~dg----~v~iwd~~~~ 374 (447)
T 3dw8_B 357 VMTGSYNN----FFRMFDRNTK 374 (447)
T ss_dssp EEEECSTT----EEEEEETTTC
T ss_pred EEEeccCC----EEEEEEcCCC
Confidence 97665443 5666777664
No 217
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.58 E-value=1.3e-14 Score=152.91 Aligned_cols=199 Identities=11% Similarity=0.004 Sum_probs=129.7
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh---hhHHHHHHHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEA 745 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~ 745 (953)
..|+||++||.+... ..| ......|+++||.|+++ +.+|+|.+.... ......++|+.+
T Consensus 11 ~~~~vvllHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~~---D~~G~G~S~~~~~~~~~~~~~~~~~~~ 72 (267)
T 3sty_A 11 VKKHFVLVHAAFHGA-----------WCW----YKIVALMRSSGHNVTAL---DLGASGINPKQALQIPNFSDYLSPLME 72 (267)
T ss_dssp CCCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEEE---CCTTSTTCSCCGGGCCSHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCc-----------chH----HHHHHHHHhcCCeEEEe---ccccCCCCCCcCCccCCHHHHHHHHHH
Confidence 368999999964211 111 23456678889999994 556788775432 235566666666
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC--------------c---Ccc--cc
Q 002209 746 AVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--------------F---GFQ--NE 806 (953)
Q Consensus 746 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~--------------~---~~~--~~ 806 (953)
.++.+ . +.+++.|+||||||.+++.++.++|++++++|++++........ + .+. ..
T Consensus 73 ~l~~l---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
T 3sty_A 73 FMASL---P--ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENG 147 (267)
T ss_dssp HHHTS---C--TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTC
T ss_pred HHHhc---C--CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhh
Confidence 65544 1 34689999999999999999999999999999988754211100 0 000 00
Q ss_pred ----cchh----------------hhhH---------------HHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHH
Q 002209 807 ----DRTL----------------WEAT---------------STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQS 851 (953)
Q Consensus 807 ----~~~~----------------~~~~---------------~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~ 851 (953)
.... .+.. ..+............++|+|+++|++|..++ ++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~ 225 (267)
T 3sty_A 148 PTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALK--KEFL 225 (267)
T ss_dssp TTSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHH--HHHH
T ss_pred hhcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccC--HHHH
Confidence 0000 0000 0011112222222235899999999999988 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
.++.+.+.. ++++++|++||... .++.+.+.+.+.+|++++
T Consensus 226 ~~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 226 KLMIEKNPP----DEVKEIEGSDHVTM-MSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHHSCC----SEEEECTTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCC----ceEEEeCCCCcccc-ccChHHHHHHHHHHHHhc
Confidence 887776643 58999999999863 566788889999999874
No 218
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.58 E-value=9.4e-14 Score=153.42 Aligned_cols=266 Identities=9% Similarity=0.030 Sum_probs=175.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccc---------cceeceEEecCCCCCCcceeeeeceEEEEccCCCCC---C
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARP---------EEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL---G 177 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~---~ 177 (953)
.+..++|||||++|+..+.++..-+++.... ......+.++|++......+.++.+.+|++..+... .
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG
T ss_pred eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc
Confidence 4678899999999999888754444443322 222345667777655554555567899988543211 1
Q ss_pred ceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEec--CC
Q 002209 178 QEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN--NS 255 (953)
Q Consensus 178 ~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp--Dg 255 (953)
....+..+. ..+....|+||++.|+..+ ....|.++|+++++........... +..+.|+| +|
T Consensus 146 ~~~~~~~h~--~~v~~~~~~~~~~~l~t~s---------~D~~v~lwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~g 210 (354)
T 2pbi_B 146 KKKSVAMHT--NYLSACSFTNSDMQILTAS---------GDGTCALWDVESGQLLQSFHGHGAD----VLCLDLAPSETG 210 (354)
T ss_dssp GCEEEEECS--SCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTCCEEEEEECCSSC----EEEEEECCCSSC
T ss_pred cceeeeccC--CcEEEEEEeCCCCEEEEEe---------CCCcEEEEeCCCCeEEEEEcCCCCC----eEEEEEEeCCCC
Confidence 123333322 4688899999999998755 3568888999988765443322222 55677776 57
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-C
Q 002209 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-A 332 (953)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~ 332 (953)
+.|+... ..+.+.++|+ +++.. .+... .
T Consensus 211 ~~l~sgs-------------------------------------------------~Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 211 NTFVSGG-------------------------------------------------CDKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp CEEEEEE-------------------------------------------------TTSCEEEEETTTCCEEEEECCCSS
T ss_pred CEEEEEe-------------------------------------------------CCCeEEEEECCCCcEEEEecCCCC
Confidence 7777651 2245778888 77543 34333 7
Q ss_pred cccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCC
Q 002209 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (953)
Q Consensus 333 ~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~ 412 (953)
.+..++|+|||+.|+..+.+. .|.+||+.......+..... ...++..+.|+|||+.
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~-------------~v~lwd~~~~~~~~~~~~~~----------~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDA-------------TCRLYDLRADREVAIYSKES----------IIFGASSVDFSLSGRL 298 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTS-------------CEEEEETTTTEEEEEECCTT----------CCSCEEEEEECTTSSE
T ss_pred CeEEEEEeCCCCEEEEEeCCC-------------eEEEEECCCCcEEEEEcCCC----------cccceeEEEEeCCCCE
Confidence 788999999999998887443 89999998654333222110 0123457899999986
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecc
Q 002209 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (953)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~ 477 (953)
++.. +..+.+.+||+ .++.....+..+...+..++|||||+.|+..+.++
T Consensus 299 l~~g-------------~~d~~i~vwd~--~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 299 LFAG-------------YNDYTINVWDV--LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp EEEE-------------ETTSCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEE-------------ECCCcEEEEEC--CCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 6654 34568999996 34433445566777788899999999999887654
No 219
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=4e-13 Score=147.88 Aligned_cols=300 Identities=10% Similarity=0.038 Sum_probs=164.0
Q ss_pred CCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhh
Q 002209 216 SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTF 295 (953)
Q Consensus 216 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (953)
+....+|.+|.++|+...+...... .....++|+|||+ |+++..
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~-l~~~~~-------------------------------- 58 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDC-LYSVDK-------------------------------- 58 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCE-EEEEEE--------------------------------
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCe-EEEEEe--------------------------------
Confidence 3456678888888876654322111 0145789999999 665510
Q ss_pred hhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCC---C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEE
Q 002209 296 QDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP---P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (953)
Q Consensus 296 ~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~---~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~ 370 (953)
.+ ....|+++++ +|+.+.+.. . .....++|||||++|++.... .+.+.+
T Consensus 59 -------~~-------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~------------~~~v~v 112 (347)
T 3hfq_A 59 -------ED-------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH------------KGTAEV 112 (347)
T ss_dssp -------ET-------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred -------cC-------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC------------CCEEEE
Confidence 00 2357888888 776655543 2 566788999999999887632 237889
Q ss_pred Eecc-CceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCce
Q 002209 371 WTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE 449 (953)
Q Consensus 371 ~d~~-g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~ 449 (953)
|+++ ++..+.+.........|. .......+..++|+|||+ + |... ...+.++++++ ..+++..
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~spdg~-l-~v~~-----------~~~~~v~~~~~--~~~g~~~ 176 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPR-PEQDGSHIHYTDLTPDNR-L-AVID-----------LGSDKVYVYNV--SDAGQLS 176 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSS-TTCSSCCEEEEEECTTSC-E-EEEE-----------TTTTEEEEEEE--CTTSCEE
T ss_pred EEeCCCCCeeecceeecCCCCCC-ccccCCCceEEEECCCCc-E-EEEe-----------CCCCEEEEEEE--CCCCcEE
Confidence 9985 444444332211100110 000011234689999999 4 4422 22457888886 2234443
Q ss_pred EEeec----ccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEee--cCCCccccCCCCCCCeEeccCCCE
Q 002209 450 ILHKL----DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF--DRSSEDVYSDPGSPMMRRTSTGTY 523 (953)
Q Consensus 450 ~l~~~----~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~SpDG~~ 523 (953)
.+... ......++|+|||++|++....+ ....+|.++..++ +...+. ...............+.|||||++
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-SQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTT-TEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-CEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 33211 11334589999999888765433 3345666665443 222221 111110000000011789999999
Q ss_pred EEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECC-CCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEE
Q 002209 524 VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN-TGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSK 602 (953)
Q Consensus 524 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 602 (953)
|+..... ...|.+|+++ ++..+.+...... -..-...+|+|||+.+++..
T Consensus 254 l~v~~~~--------------------~~~v~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 254 LYVSNRG--------------------YNTLAVFAVTADGHLTLIQQISTE---------GDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEET--------------------TTEEEEEEECGGGCEEEEEEEECS---------SSCCCEEEECTTSSEEEEEE
T ss_pred EEEEeCC--------------------CCEEEEEEECCCCcEEEeEEEecC---------CCCcCeEEECCCCCEEEEEE
Confidence 8766521 1247888875 3333333221110 00012357999999877655
Q ss_pred ecCCCCceEEEEECCCCCeeEEec
Q 002209 603 ESKTENTQYYIQSWPDKKSCQITD 626 (953)
Q Consensus 603 ~~~~~p~~l~~~~~~~g~~~~Lt~ 626 (953)
.... .-.+|.++..+|+.+.+..
T Consensus 305 ~~~~-~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 305 QNTD-NATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp TTTT-EEEEEEECTTTCCEEEEEE
T ss_pred cCCC-cEEEEEEeCCCCeEEeccc
Confidence 5322 3446666878888776653
No 220
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.58 E-value=3.5e-13 Score=163.76 Aligned_cols=265 Identities=8% Similarity=-0.029 Sum_probs=162.3
Q ss_pred cccceEec-cCCCeEEEEEeeccccCCCCcceEEEEECCCC-ceeecccCCCccccccccceEEecCCeEEEEEecCCCC
Q 002209 190 KLNFVTWS-QDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (953)
Q Consensus 190 ~~~~~~wS-PDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 267 (953)
....++|| |||++|||..+.. +++...||++|+++| +. +... +......+.|||||+.|+|+..+..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~----G~~~~~l~v~dl~~g~~~--l~~~----~~~~~~~~~WspDg~~l~y~~~d~~- 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS----GNEVYTIEFKRISDPSQT--IADK----VSGTNGEIVWGPDHTSLFYVTKDET- 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS----SSSCEEEEEEETTCTTCC--CCCC----EEEECSCCEECSSTTEEEEEEECTT-
T ss_pred EEeeeEecCCCCCEEEEEEeCC----CCceEEEEEEECCCCCEe--CCcc----ccCceeeEEEecCCCEEEEEEECCC-
Confidence 46779999 9999999988633 444568999999998 62 2110 1111457999999999998832100
Q ss_pred CCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--eeEeCC-C--CcccccccCC
Q 002209 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGP-P--AVYTSLDPSP 341 (953)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--~~~l~~-~--~~~~~~~~Sp 341 (953)
....+||++++ ++. .+.+.. . ....++.|||
T Consensus 244 -------------------------------------------~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp 280 (751)
T 2xe4_A 244 -------------------------------------------LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA 280 (751)
T ss_dssp -------------------------------------------CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred -------------------------------------------CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence 01247999999 653 234422 1 4456789999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCc--eE--EEeccCCCcccCCccccccccCccceeeccC---CCCce
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSD---KPSTL 414 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~--~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~wspD---g~~i~ 414 (953)
||++|++.+... ...+|+++|++++ .. +.++... ..+.|++| |+.++
T Consensus 281 Dg~~l~~~~~~~----------~~~~l~~~d~~~~~~~~~~~~l~~~~----------------~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 281 DTNTLCIGSQSP----------ETAEVHLLDLRKGNAHNTLEIVRPRE----------------KGVRYDVQMHGTSHLV 334 (751)
T ss_dssp TSSEEEEEEECS----------SCEEEEEEESSSCTTCCCEEESSCCC----------------TTCCEEEEEETTTEEE
T ss_pred CCCEEEEEecCC----------CCceEEEEECCCCCCCceeEEeecCC----------------CCceEEEeeeeCCEEE
Confidence 999999998532 1348999999864 34 4444321 13446666 88888
Q ss_pred EEEEeccCCCcccccccCCeEEEEecCCCCC-CCceE-EeecccccCCeeeccCCceEEEEEecccCceEEEEEcC----
Q 002209 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQG-EGPEI-LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP---- 488 (953)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g-~~~~~-l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~---- 488 (953)
|.++... ..+..|+++++ ++ ++.+. +........-..|+++++.|++....++ ..+|+++++
T Consensus 335 ~~t~~~~--------a~~~~L~~~d~---~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g-~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 335 ILTNEGG--------AVNHKLLIAPR---GQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG-LTRIWTMMADSQD 402 (751)
T ss_dssp EEECTTT--------CTTCEEEEEET---TSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT-EEEEEEEECCTTT
T ss_pred EEeCCCC--------CCCcEEEEEcC---CCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC-EEEEEEEeccccc
Confidence 8744320 23458999986 32 34344 4333333222345667888888876553 468999996
Q ss_pred ---CCCCCC-cEEeecCCCccccCCCCCCCeEe----ccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECC
Q 002209 489 ---GSKDVA-PRILFDRSSEDVYSDPGSPMMRR----TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN 560 (953)
Q Consensus 489 ---~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~----SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~ 560 (953)
+++ + .+.+.-.......+ +.+ ++|++.++|..... ...+.+|.+|+.
T Consensus 403 ~~~~~g--~~~~~l~l~~~~~~~~------~~~~~~~~~~~~~l~~~~ss~-----------------~~P~~~~~~d~~ 457 (751)
T 2xe4_A 403 GVFKAG--TGLREVVMEEPIFTVH------LVESQMLEYEEPTFRMEYSSL-----------------ATPNTWFDVSPQ 457 (751)
T ss_dssp SCCCTT--TCCEECCCCCSSCEEE------ECGGGCCCTTCSCEEEEEEET-----------------TEEEEEEEECTT
T ss_pred ccccCC--ccceEECCCCceeEEE------eccCcccCCCCCEEEEEEeCC-----------------CCCCEEEEEECC
Confidence 443 3 34432111110000 212 56787777776432 123459999999
Q ss_pred CCceEEEeccC
Q 002209 561 TGSKERIWESD 571 (953)
Q Consensus 561 ~~~~~~l~~~~ 571 (953)
+++.+.|+...
T Consensus 458 ~~~~~~l~~~~ 468 (751)
T 2xe4_A 458 DHSRTAVKVRE 468 (751)
T ss_dssp TCCEEEEEECC
T ss_pred CCcEEEEeccc
Confidence 99888887543
No 221
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.58 E-value=8.8e-14 Score=153.41 Aligned_cols=275 Identities=7% Similarity=0.001 Sum_probs=163.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++++.+... ... ++.|.||++.+ ++...+.......
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~-----------------------~~~------d~~v~iw~~~~----~~~~~~~~~~~~~ 66 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNF-----------------------ARG------TGVIQLYEIQH----GDLKLLREIEKAK 66 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC-------------------------CC------CEEEEEEEECS----SSEEEEEEEEESS
T ss_pred ceEEEEEcCCCceEEEecCc-----------------------cCC------CcEEEEEeCCC----CcccceeeecccC
Confidence 57788999999888766531 000 03789999954 3332222122334
Q ss_pred cccceEeccC---CCeEEEEEeeccccCCCCcceEEEEECCCCc-ee-ecccCCCccccccccce------EEecCCeEE
Q 002209 190 KLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-AR-PLFQSPDIYLNAIFDNF------VWVNNSTLL 258 (953)
Q Consensus 190 ~~~~~~wSPD---G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~-~~-~lt~~~~~~~~~~~~~~------~wspDg~~l 258 (953)
.+....|+|| |+.|+... ....|.++++.+++ .. .+..+.. . +..+ +|+|||+.|
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~-~----v~~~~~~~~~~~s~~~~~l 132 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGD---------FGGNLHIWNLEAPEMPVYSVKGHKE-I----INAIDGIGGLGIGEGAPEI 132 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEE---------TTSCEEEECTTSCSSCSEEECCCSS-C----EEEEEEESGGGCC-CCCEE
T ss_pred cEEEEEEcCCCCCCceEEEec---------CCCeEEEEeCCCCCccEEEEEeccc-c----eEEEeeccccccCCCccEE
Confidence 7899999999 68888754 25678888988776 33 3322222 1 4455 567899988
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--eeEeCCC----
Q 002209 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP---- 331 (953)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--~~~l~~~---- 331 (953)
+... ..+.|.++|+ +++ ...+...
T Consensus 133 ~~~~-------------------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~ 163 (357)
T 3i2n_A 133 VTGS-------------------------------------------------RDGTVKVWDPRQKDDPVANMEPVQGEN 163 (357)
T ss_dssp EEEE-------------------------------------------------TTSCEEEECTTSCSSCSEEECCCTTSC
T ss_pred EEEe-------------------------------------------------CCCeEEEEeCCCCCCcceeccccCCCC
Confidence 8661 1235667777 443 3333322
Q ss_pred -Ccccccc----cCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceee
Q 002209 332 -AVYTSLD----PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINW 406 (953)
Q Consensus 332 -~~~~~~~----~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~w 406 (953)
..+..+. |+|||+.|+....+ +.|.+||+.++.......+. ..+..+.|
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~-------------~~v~~~~~ 217 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAGYDN-------------GDIKLFDLRNMALRWETNIK-------------NGVCSLEF 217 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEE
T ss_pred CCceEEEEEEeccCCCCCEEEEEccC-------------CeEEEEECccCceeeecCCC-------------CceEEEEc
Confidence 1344444 89999999988744 38999999977665443322 23467999
Q ss_pred cc---CCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe-----ecccccCCeeeccCCceEEEEEeccc
Q 002209 407 RS---DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-----KLDLRYGGISWCDDSLALVYESWYKT 478 (953)
Q Consensus 407 sp---Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~-----~~~~~~~~~~~SpDg~~l~~~~~~~~ 478 (953)
+| +++.++.. +..+.+.+|++ .++.....+. .+...+..+.|+|||+.++++...+
T Consensus 218 ~~~~~~~~~l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d- 281 (357)
T 3i2n_A 218 DRKDISMNKLVAT-------------SLEGKFHVFDM--RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA- 281 (357)
T ss_dssp SCSSSSCCEEEEE-------------ESTTEEEEEEE--EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT-
T ss_pred CCCCCCCCEEEEE-------------CCCCeEEEEeC--cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC-
Confidence 99 88876665 34567888886 2222222222 5566678899999999544443333
Q ss_pred CceEEEEEcCCCCCC---------------CcEEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 479 RRTRTWVISPGSKDV---------------APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 479 ~~~~l~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
+..++|.+....... +...........+.. +.|+|||++|++..
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS------LDWSPDKRGLCVCS 340 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE------EEECSSSTTEEEEE
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE------EEEcCCCCeEEEEe
Confidence 224566665332100 011112222222332 78999999998543
No 222
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.58 E-value=3.1e-14 Score=167.65 Aligned_cols=220 Identities=14% Similarity=0.034 Sum_probs=147.0
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEc
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (953)
.+.-.+...||.+++....- ..|+||++||++... ..| ......|+++||.|+.+
T Consensus 237 ~~~~~~~~~dg~~l~~~~~g----------~~p~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~v~~~ 291 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGFPESW-----------YSW----RYQIPALAQAGYRVLAM 291 (555)
T ss_dssp SEEEEEEEETTEEEEEEEEC----------SSSEEEEECCTTCCG-----------GGG----TTHHHHHHHTTCEEEEE
T ss_pred cceeEEEeCCCcEEEEEEcC----------CCCEEEEEeCCCCch-----------hHH----HHHHHHHHhCCCEEEEe
Confidence 45555666789888766541 258899999964221 112 23456788999999995
Q ss_pred CCCCCCCCCChhhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCC
Q 002209 719 PTTPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (953)
Q Consensus 719 ~~~~~~G~G~~~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (953)
|. +|+|.+.... ........|+.++++.+ +.+++.++||||||.+++.++.++|++++++|++++..
T Consensus 292 D~---~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 362 (555)
T 3i28_A 292 DM---KGYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362 (555)
T ss_dssp CC---TTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cC---CCCCCCCCCCCcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCC
Confidence 54 6777764422 22566677777777765 34689999999999999999999999999999988754
Q ss_pred CCCCCCcCcc-------------------------------------------------------------c---ccch-
Q 002209 795 NRTLTPFGFQ-------------------------------------------------------------N---EDRT- 809 (953)
Q Consensus 795 d~~~~~~~~~-------------------------------------------------------------~---~~~~- 809 (953)
.......... . ....
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (555)
T 3i28_A 363 IPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMV 442 (555)
T ss_dssp CCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTC
T ss_pred CCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCcccccccccc
Confidence 3111000000 0 0000
Q ss_pred hhhhHHHH----------------------HhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEE
Q 002209 810 LWEATSTY----------------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRL 867 (953)
Q Consensus 810 ~~~~~~~~----------------------~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~ 867 (953)
..+....+ ...+....+.++++|+|+++|++|..+| +..+..+.+.+. .+++
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~----~~~~ 516 (555)
T 3i28_A 443 TEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWIP----HLKR 516 (555)
T ss_dssp CHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGGTCT----TCEE
T ss_pred CHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcC--HHHHHHHHhhCC----CceE
Confidence 00000000 0012223446789999999999999998 888877766653 3589
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 868 VILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 868 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
++++++||... .+....+.+.+.+||++...
T Consensus 517 ~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 547 (555)
T 3i28_A 517 GHIEDCGHWTQ-MDKPTEVNQILIKWLDSDAR 547 (555)
T ss_dssp EEETTCCSCHH-HHSHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCCCCcc-hhCHHHHHHHHHHHHHhccC
Confidence 99999999753 45677888999999998764
No 223
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.58 E-value=4.2e-14 Score=149.39 Aligned_cols=211 Identities=18% Similarity=0.132 Sum_probs=138.0
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (953)
..+|.+++...+-|.+ .+.|.||++||..... ..| . .....|+ .+|.|++ +|.+|
T Consensus 8 ~~~g~~l~y~~~g~~~------~~~~~vvllHG~~~~~-----------~~~---~-~~~~~L~-~~~~vi~---~D~~G 62 (266)
T 2xua_A 8 AVNGTELHYRIDGERH------GNAPWIVLSNSLGTDL-----------SMW---A-PQVAALS-KHFRVLR---YDTRG 62 (266)
T ss_dssp ECSSSEEEEEEESCSS------SCCCEEEEECCTTCCG-----------GGG---G-GGHHHHH-TTSEEEE---ECCTT
T ss_pred EECCEEEEEEEcCCcc------CCCCeEEEecCccCCH-----------HHH---H-HHHHHHh-cCeEEEE---ecCCC
Confidence 3588888887775421 1247899999953111 112 1 2234454 5699999 55578
Q ss_pred CCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-cC
Q 002209 726 EGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FG 802 (953)
Q Consensus 726 ~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~-~~ 802 (953)
+|.+... .......++|+.+.++.+ ..+++.|+||||||.+++.+|.++|++++++|++++........ +.
T Consensus 63 ~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~ 136 (266)
T 2xua_A 63 HGHSEAPKGPYTIEQLTGDVLGLMDTL------KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWV 136 (266)
T ss_dssp STTSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHH
Confidence 8887542 223566778887777765 23589999999999999999999999999999988754321000 00
Q ss_pred ----------ccc---c-----cchhh--hh---------------H-------HHHHhcCcccccCCCCCcEEEEEeCC
Q 002209 803 ----------FQN---E-----DRTLW--EA---------------T-------STYVEMSPFMSANKLKKPILLVHGEE 840 (953)
Q Consensus 803 ----------~~~---~-----~~~~~--~~---------------~-------~~~~~~sp~~~~~~i~~P~Li~~G~~ 840 (953)
... . ....+ .. . ..+...+....+.++++|+|+++|++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 216 (266)
T 2xua_A 137 PRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTH 216 (266)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETT
T ss_pred HHHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCC
Confidence 000 0 00000 00 0 00112233345677899999999999
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 841 DNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 841 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
|..+| ++.++++.+.+.. .++++++ +||... .+..+.+.+.+.+||.
T Consensus 217 D~~~~--~~~~~~~~~~~~~----~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~ 263 (266)
T 2xua_A 217 DLAAT--PAQGRELAQAIAG----ARYVELD-ASHISN-IERADAFTKTVVDFLT 263 (266)
T ss_dssp CSSSC--HHHHHHHHHHSTT----CEEEEES-CCSSHH-HHTHHHHHHHHHHHHT
T ss_pred CCcCC--HHHHHHHHHhCCC----CEEEEec-CCCCch-hcCHHHHHHHHHHHHH
Confidence 99998 8888888776644 4889999 999863 4556778888888875
No 224
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.58 E-value=2.9e-14 Score=155.85 Aligned_cols=216 Identities=15% Similarity=0.138 Sum_probs=136.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIG 725 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G 725 (953)
.+|.++++..+-|++- ..+-+.||++||++.... .| .. ....|++ .||.|++ +|.+|
T Consensus 35 ~~g~~l~y~~~G~~~~----~~~g~plvllHG~~~~~~-----------~w---~~-~~~~l~~~~~~~Via---~D~rG 92 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA----QPHALPLIVLHGGPGMAH-----------NY---VA-NIAALADETGRTVIH---YDQVG 92 (330)
T ss_dssp ETTEEEEEEEECCSSC----CTTCCCEEEECCTTTCCS-----------GG---GG-GGGGHHHHHTCCEEE---ECCTT
T ss_pred ecCcEEEEEEecCccC----CCCCCcEEEECCCCCCch-----------hH---HH-HHHHhccccCcEEEE---ECCCC
Confidence 4788898888866421 101124778999642211 11 11 1234554 6999999 55578
Q ss_pred CCChhh--h---h-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC-
Q 002209 726 EGDEEA--N---D-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL- 798 (953)
Q Consensus 726 ~G~~~~--~---~-~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~- 798 (953)
+|.|.. . . ......++|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|++++......
T Consensus 93 ~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~ 166 (330)
T 3nwo_A 93 CGNSTHLPDAPADFWTPQLFVDEFHAVCTAL------GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLW 166 (330)
T ss_dssp STTSCCCTTSCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHH
T ss_pred CCCCCCCCCCccccccHHHHHHHHHHHHHHc------CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHH
Confidence 887743 1 1 12466678887777765 235899999999999999999999999999998876432100
Q ss_pred ----------CCc------------C-ccc-----c---------c-chhhh------------hHHHHHh---------
Q 002209 799 ----------TPF------------G-FQN-----E---------D-RTLWE------------ATSTYVE--------- 819 (953)
Q Consensus 799 ----------~~~------------~-~~~-----~---------~-~~~~~------------~~~~~~~--------- 819 (953)
.+. . +.. . . ...+. ....+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 3nwo_A 167 SEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHV 246 (330)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhh
Confidence 000 0 000 0 0 00000 0000110
Q ss_pred ------cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHH
Q 002209 820 ------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRW 893 (953)
Q Consensus 820 ------~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 893 (953)
++....+.+|++|+||++|++|..+| ..+.++.+.+. ..+++++|++||.. ..+..+.+.+.+.+|
T Consensus 247 ~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p---~~~~~~~~~ip----~~~~~~i~~~gH~~-~~e~p~~~~~~i~~F 318 (330)
T 3nwo_A 247 VGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP---KTWQPFVDHIP----DVRSHVFPGTSHCT-HLEKPEEFRAVVAQF 318 (330)
T ss_dssp CSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH---HHHHHHHHHCS----SEEEEEETTCCTTH-HHHSHHHHHHHHHHH
T ss_pred hccccCCchhhhcccCCCCeEEEeeCCCccCh---HHHHHHHHhCC----CCcEEEeCCCCCch-hhcCHHHHHHHHHHH
Confidence 11223456789999999999998764 45566655443 46999999999976 356778899999999
Q ss_pred HHHhc
Q 002209 894 LQKYC 898 (953)
Q Consensus 894 l~~~l 898 (953)
|.++-
T Consensus 319 L~~~~ 323 (330)
T 3nwo_A 319 LHQHD 323 (330)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98864
No 225
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.58 E-value=1e-12 Score=148.73 Aligned_cols=257 Identities=9% Similarity=0.037 Sum_probs=145.0
Q ss_pred ceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCcccc
Q 002209 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (953)
Q Consensus 114 ~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~ 193 (953)
..|||||++|+....+ +.|.+|++.. +....+. ......+..
T Consensus 103 ~~~~~~~~~l~~~~~d---------------------------------g~i~iwd~~~----~~~~~~~-~~h~~~v~~ 144 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTE---------------------------------GDIKVLDSNF----NLQREID-QAHVSEITK 144 (420)
T ss_dssp EEECSSSCEEEEEETT---------------------------------SCEEEECTTS----CEEEEET-TSSSSCEEE
T ss_pred EEEecCCCEEEEEECC---------------------------------CCEEEEeCCC----cceeeec-ccccCccEE
Confidence 4689999999988775 3679999843 3332221 122347899
Q ss_pred eEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCC
Q 002209 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (953)
Q Consensus 194 ~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 273 (953)
+.|+|||+.|+... ....|.++|+.+++........... +..++|+|||+.|+....+...
T Consensus 145 ~~~~~~~~~l~s~s---------~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~d~~v------ 205 (420)
T 3vl1_A 145 LKFFPSGEALISSS---------QDMQLKIWSVKDGSNPRTLIGHRAT----VTDIAIIDRGRNVLSASLDGTI------ 205 (420)
T ss_dssp EEECTTSSEEEEEE---------TTSEEEEEETTTCCCCEEEECCSSC----EEEEEEETTTTEEEEEETTSCE------
T ss_pred EEECCCCCEEEEEe---------CCCeEEEEeCCCCcCceEEcCCCCc----EEEEEEcCCCCEEEEEcCCCcE------
Confidence 99999999888755 2568999999877654333222222 7789999999999876321111
Q ss_pred CCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc--CCceeEeC-CCCcccccccCCCCcEEEEEE
Q 002209 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIG-PPAVYTSLDPSPDEKYILISS 350 (953)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~--~g~~~~l~-~~~~~~~~~~SpDG~~l~~~~ 350 (953)
.+++......... +....+ ....+..+.. .+...... ....+..++|||||++|+...
T Consensus 206 ------~iwd~~~~~~~~~------~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (420)
T 3vl1_A 206 ------RLWECGTGTTIHT------FNRKEN-------PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH 266 (420)
T ss_dssp ------EEEETTTTEEEEE------ECBTTB-------TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE
T ss_pred ------EEeECCCCceeEE------eecCCC-------CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc
Confidence 1111110000000 000000 0011111111 11000001 115567899999999998877
Q ss_pred ecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccc
Q 002209 351 IHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEV 429 (953)
Q Consensus 351 ~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~ 429 (953)
.+. .|.+||+..+. ...+... ....+..++|+|||+.+++..
T Consensus 267 ~dg-------------~i~i~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~l~~g------------ 309 (420)
T 3vl1_A 267 VSG-------------VITVHNVFSKEQTIQLPSK------------FTCSCNSLTVDGNNANYIYAG------------ 309 (420)
T ss_dssp TTS-------------CEEEEETTTCCEEEEECCT------------TSSCEEEEEECSSCTTEEEEE------------
T ss_pred CCC-------------eEEEEECCCCceeEEcccc------------cCCCceeEEEeCCCCCEEEEE------------
Confidence 443 89999998544 3333221 112356799999998544441
Q ss_pred ccCCeEEEEecCCCCCCC-ceEEee-cccccCCeeeccCCceEEEEEecccCceEEEEEcC
Q 002209 430 TPRDIIYTQQAEPVQGEG-PEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (953)
Q Consensus 430 ~~~~~l~~~d~~~~~g~~-~~~l~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~ 488 (953)
+..+.|.+||+ .++.. ...+.. ....+..+ ++++|+.|+..+.++ ..++|.+..
T Consensus 310 ~~dg~i~vwd~--~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~--~v~iw~~~~ 365 (420)
T 3vl1_A 310 YENGMLAQWDL--RSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDT--SIKLDIISD 365 (420)
T ss_dssp ETTSEEEEEET--TCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTE--EEEEEEECC
T ss_pred eCCCeEEEEEc--CCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCc--cEEEEeccC
Confidence 34568999997 33333 344544 33344445 667888777665443 236666554
No 226
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.57 E-value=1.2e-12 Score=141.04 Aligned_cols=245 Identities=9% Similarity=0.046 Sum_probs=159.7
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|||||++|+... ....|.++|+++++..+........ +..+.|+|||+.|+...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~---------~dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s------ 74 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTL---------YSGRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGS------ 74 (304)
T ss_dssp SCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEE------
T ss_pred CceEEEEECCCCCEEEEEc---------CCCcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEEC------
Confidence 3688999999999998855 2567888899887654433322222 67889999999998761
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG~~ 345 (953)
....|.++|+ +|+. ..+... ..+..++|+|||++
T Consensus 75 -------------------------------------------~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 75 -------------------------------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp -------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred -------------------------------------------CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 2245777788 6643 344444 77889999999999
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCc-eEEE-eccCCCcccCCccccccccCccceeeccC-CCCceEEEEeccC
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSD-KPSTLYWAETQDG 422 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~-~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~wspD-g~~i~~~~~~~~~ 422 (953)
|+..+.+. .|.+||+..+ .... +..+ ...+..++|+|+ ++.++..
T Consensus 112 l~sgs~D~-------------~v~lWd~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~l~sg------ 159 (304)
T 2ynn_A 112 VLSGSDDL-------------TVKLWNWENNWALEQTFEGH-------------EHFVMCVAFNPKDPSTFASG------ 159 (304)
T ss_dssp EEEEETTS-------------CEEEEEGGGTTEEEEEECCC-------------CSCEEEEEECTTCTTEEEEE------
T ss_pred EEEECCCC-------------eEEEEECCCCcchhhhhccc-------------CCcEEEEEECCCCCCEEEEE------
Confidence 98777443 8999999754 3332 2222 133467899995 5544443
Q ss_pred CCcccccccCCeEEEEecCCCCCCCceEEe-ecccccCCeeecc--CCceEEEEEecccCceEEEEEcCCCCCCCcEEee
Q 002209 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCD--DSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (953)
Q Consensus 423 ~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~-~~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 499 (953)
+..+.|.+||+ ..+.....+. .....+..+.|+| |++.|+..+.++ .+.++|+.++ +.....
T Consensus 160 -------s~D~~v~iwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~----~i~iWd~~~~--~~~~~~ 224 (304)
T 2ynn_A 160 -------CLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQTK--SCVATL 224 (304)
T ss_dssp -------ETTSEEEEEET--TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS----EEEEEETTTT--EEEEEE
T ss_pred -------eCCCeEEEEEC--CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC----eEEEEeCCCC--ccceee
Confidence 44568899996 2222333333 2334455677776 777777766543 4555566654 333333
Q ss_pred cCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEec
Q 002209 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 500 ~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~ 569 (953)
......+.. +.|+|+++.|+....+. .|.+||+.+++..+...
T Consensus 225 ~~h~~~v~~------~~~~p~~~~l~s~s~Dg---------------------~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 225 EGHMSNVSF------AVFHPTLPIIISGSEDG---------------------TLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp ECCSSCEEE------EEECSSSSEEEEEETTS---------------------CEEEEETTTCCEEEEEC
T ss_pred CCCCCCEEE------EEECCCCCEEEEEcCCC---------------------eEEEEECCCCceeeecc
Confidence 333333333 78999999888776322 39999999888765544
No 227
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.57 E-value=2.7e-14 Score=154.81 Aligned_cols=207 Identities=14% Similarity=0.096 Sum_probs=134.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|..+....+-| .|+||++||+.... ..| ...+..|++ ||.|+.+|. +|+
T Consensus 55 ~~~~~~~~~~~g~----------~p~vv~lhG~~~~~-----------~~~----~~~~~~L~~-~~~v~~~D~---~G~ 105 (314)
T 3kxp_A 55 IGRITLNVREKGS----------GPLMLFFHGITSNS-----------AVF----EPLMIRLSD-RFTTIAVDQ---RGH 105 (314)
T ss_dssp CSSCEEEEEEECC----------SSEEEEECCTTCCG-----------GGG----HHHHHTTTT-TSEEEEECC---TTS
T ss_pred ECCEEEEEEecCC----------CCEEEEECCCCCCH-----------HHH----HHHHHHHHc-CCeEEEEeC---CCc
Confidence 4777777665422 57899999963111 111 123334444 799999555 567
Q ss_pred CChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCC-----
Q 002209 727 GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT----- 799 (953)
Q Consensus 727 G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~----- 799 (953)
|.+... ........+|+.++++++ +.++++|+|||+||.+++.++.++|++++++|++++.......
T Consensus 106 G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 106 GLSDKPETGYEANDYADDIAGLIRTL------ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp TTSCCCSSCCSHHHHHHHHHHHHHHH------TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 766422 223566677777777665 2368999999999999999999999999999999875432100
Q ss_pred -------CcCccccc--chh---------hhhHHHHHh---------------------------cCcccccCCCCCcEE
Q 002209 800 -------PFGFQNED--RTL---------WEATSTYVE---------------------------MSPFMSANKLKKPIL 834 (953)
Q Consensus 800 -------~~~~~~~~--~~~---------~~~~~~~~~---------------------------~sp~~~~~~i~~P~L 834 (953)
...+.... ... ......+.. .+....+.++++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 259 (314)
T 3kxp_A 180 EARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVL 259 (314)
T ss_dssp HHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEE
T ss_pred HHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEE
Confidence 00000000 000 000000000 033344567899999
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 835 LVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 835 i~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
+++|++|..+| ++.+.++++.++. ++++++|++||.+. .+....+.+.+.+||+
T Consensus 260 ii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~~g~gH~~~-~e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 260 IVRGESSKLVS--AAALAKTSRLRPD----LPVVVVPGADHYVN-EVSPEITLKAITNFID 313 (314)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHCTT----SCEEEETTCCSCHH-HHCHHHHHHHHHHHHH
T ss_pred EEecCCCccCC--HHHHHHHHHhCCC----ceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 99999999998 8888888877743 47889999999863 4556778888888886
No 228
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.57 E-value=2.7e-12 Score=143.35 Aligned_cols=300 Identities=9% Similarity=0.042 Sum_probs=182.0
Q ss_pred CcccceEeccCC-CeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEec-CCeEEEEEecCCC
Q 002209 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLLR 266 (953)
Q Consensus 189 ~~~~~~~wSPDG-~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~ 266 (953)
..+....|+||| +.|+.... ...|.++++.+++......... ....+..++|+| |++.|+...
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~---- 138 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK---------GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVSS---- 138 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB---------TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEEE----
T ss_pred CCEEEEEECCCCCCEEEEEcC---------CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEEe----
Confidence 468899999999 77776542 5578888998877655433111 112277899999 667777551
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC----CcccccccCC
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP----AVYTSLDPSP 341 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~----~~~~~~~~Sp 341 (953)
..+.|.++|+ ++....+... ..+..++|+|
T Consensus 139 ---------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 139 ---------------------------------------------IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp ---------------------------------------------TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred ---------------------------------------------CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 2245677788 5444444322 4578899999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~ 421 (953)
||+.|+....+ +.|.+||+++.....+..+. ..+..++|+||++.+++..
T Consensus 174 ~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~l~s~---- 223 (383)
T 3ei3_B 174 SRQMLATGDST-------------GRLLLLGLDGHEIFKEKLHK-------------AKVTHAEFNPRCDWLMATS---- 223 (383)
T ss_dssp TTTEEEEEETT-------------SEEEEEETTSCEEEEEECSS-------------SCEEEEEECSSCTTEEEEE----
T ss_pred CCCEEEEECCC-------------CCEEEEECCCCEEEEeccCC-------------CcEEEEEECCCCCCEEEEE----
Confidence 99999888744 38999999876666665432 3456899999998544441
Q ss_pred CCCcccccccCCeEEEEecCCCCC-CCceEEeecccccCCeeecc-CCceEEEEEecccCceEEEEEcCCCCCCCcEEee
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQG-EGPEILHKLDLRYGGISWCD-DSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g-~~~~~l~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 499 (953)
+..+.|.+||+..... +.......+...+..+.|+| ||+.|+....++ .|.++|+.++. ....+.
T Consensus 224 --------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~----~i~iwd~~~~~-~~~~~~ 290 (383)
T 3ei3_B 224 --------SVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRN----EIRVYSSYDWS-KPDQII 290 (383)
T ss_dssp --------ETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSS----EEEEEETTBTT-SCSEEE
T ss_pred --------eCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCC----cEEEEECCCCc-cccccc
Confidence 3355789999711110 22333335666778899999 999988776543 56677776653 222222
Q ss_pred cCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeee
Q 002209 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (953)
Q Consensus 500 ~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~ 579 (953)
.... ..+.........|+|++..++...... +.+ .+ +....|++||+.+++.......... ...
T Consensus 291 ~~~~-~~~~~~~~~~~~~~p~~~~~~~~~s~d---g~~---s~------s~d~~i~iwd~~~~~~~~~l~~~~~---~~~ 354 (383)
T 3ei3_B 291 IHPH-RQFQHLTPIKATWHPMYDLIVAGRYPD---DQL---LL------NDKRTIDIYDANSGGLVHQLRDPNA---AGI 354 (383)
T ss_dssp ECCB-CCCTTSCCCCCEECSSSSEEEEECBCC---TTT---CT------TCCCCEEEEETTTCCEEEEECBTTB---CSC
T ss_pred cccc-cccccccceEEeccCCCCceEEEecCC---ccc---cc------CCCCeEEEEecCCCceeeeecCCCC---Cce
Confidence 1111 011111111246888888776554321 111 11 1234599999998887555443211 000
Q ss_pred EeeccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002209 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (953)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 618 (953)
. ...+|++|++.++.. + . ..|.+|++.+
T Consensus 355 ~------~~~~~s~~g~~l~s~-s-d---~~i~iw~~~~ 382 (383)
T 3ei3_B 355 I------SLNKFSPTGDVLASG-M-G---FNILIWNRED 382 (383)
T ss_dssp C------CEEEECTTSSEEEEE-E-T---TEEEEEECC-
T ss_pred E------EEEEEecCccEEEEe-c-C---CcEEEEecCC
Confidence 0 113689999977654 3 2 4688888653
No 229
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.57 E-value=6.8e-13 Score=149.74 Aligned_cols=265 Identities=12% Similarity=0.095 Sum_probs=170.3
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|+||++.|+... ....|.++|+.+++..+........ +..++|+|||+.|+....
T Consensus 109 ~~V~~~~~~p~~~~l~s~s---------~Dg~i~vwd~~~~~~~~~l~~h~~~----V~~v~~~~~~~~l~sgs~----- 170 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSAS---------EDATIKVWDYETGDFERTLKGHTDS----VQDISFDHSGKLLASCSA----- 170 (410)
T ss_dssp SCEEEEEECSSSSEEEEEE---------SSSCEEEEETTTCCCCEEECCCSSC----EEEEEECTTSSEEEEEET-----
T ss_pred CcEEEEEEcCCCCEEEEEe---------CCCeEEEEECCCCcEEEEEeccCCc----EEEEEEcCCCCEEEEEeC-----
Confidence 4688999999999888755 2567888899888765443323222 778999999998886621
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG~~ 345 (953)
.+.|.++|+ +++. +.+... ..+..++|+|||++
T Consensus 171 --------------------------------------------D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 171 --------------------------------------------DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp --------------------------------------------TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred --------------------------------------------CCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 133446677 5543 333333 67889999999999
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
|+..+.+ +.|.+||+..+. .+.+..+. ..+..+.|+|||+.++..
T Consensus 207 l~s~s~D-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~g~~l~s~-------- 252 (410)
T 1vyh_C 207 IVSASRD-------------KTIKMWEVQTGYCVKTFTGHR-------------EWVRMVRPNQDGTLIASC-------- 252 (410)
T ss_dssp EEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEEeCC-------------CeEEEEECCCCcEEEEEeCCC-------------ccEEEEEECCCCCEEEEE--------
Confidence 9887744 389999998544 34443322 234678999999866554
Q ss_pred cccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccC--------------------CceEEEEEecccCceEEE
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDD--------------------SLALVYESWYKTRRTRTW 484 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpD--------------------g~~l~~~~~~~~~~~~l~ 484 (953)
+..+.+.+|++ .++.....+..+...+..+.|+|+ |..|+..+.++ .+.
T Consensus 253 -----s~D~~v~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~----~i~ 321 (410)
T 1vyh_C 253 -----SNDQTVRVWVV--ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK----TIK 321 (410)
T ss_dssp -----ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS----EEE
T ss_pred -----cCCCeEEEEEC--CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC----eEE
Confidence 44567889986 222223345556666778899997 45566655433 466
Q ss_pred EEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCce
Q 002209 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSK 564 (953)
Q Consensus 485 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~ 564 (953)
++|+.++ ............+.. +.|+|+|++|+....+ ..|++||+.+++.
T Consensus 322 iwd~~~~--~~~~~~~~h~~~v~~------v~~~~~g~~l~s~s~D---------------------~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 322 MWDVSTG--MCLMTLVGHDNWVRG------VLFHSGGKFILSCADD---------------------KTLRVWDYKNKRC 372 (410)
T ss_dssp EEETTTT--EEEEEEECCSSCEEE------EEECSSSSCEEEEETT---------------------TEEEEECCTTSCC
T ss_pred EEECCCC--ceEEEEECCCCcEEE------EEEcCCCCEEEEEeCC---------------------CeEEEEECCCCce
Confidence 6677664 222223333332333 7899999999876632 2499999987765
Q ss_pred EEEeccCcccceeeeEeeccCCccccccccCCEEEE
Q 002209 565 ERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILT 600 (953)
Q Consensus 565 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 600 (953)
......... .+.. .+|+|++..++.
T Consensus 373 ~~~~~~h~~----~v~~-------l~~~~~~~~l~s 397 (410)
T 1vyh_C 373 MKTLNAHEH----FVTS-------LDFHKTAPYVVT 397 (410)
T ss_dssp CEEEECCSS----CEEE-------EEECSSSSCEEE
T ss_pred EEEEcCCCC----cEEE-------EEEcCCCCEEEE
Confidence 443332211 1222 367888886653
No 230
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.56 E-value=3.2e-12 Score=138.29 Aligned_cols=268 Identities=10% Similarity=0.142 Sum_probs=168.7
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|+|||++|+.... ...|.++++.+++........... +..++|+|||+.|+...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~---------dg~i~iw~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~------ 84 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSA---------DKLIKIWGAYDGKFEKTISGHKLG----ISDVAWSSDSNLLVSAS------ 84 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET---------TSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEE------
T ss_pred CcEEEEEECCCCCEEEEeeC---------CCeEEEEeCCCcccchhhccCCCc----eEEEEEcCCCCEEEEEC------
Confidence 46889999999999988552 456788888877765544333322 77899999999998761
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG~~ 345 (953)
..+.|.++|+ +++. ..+... ..+..+.|+|||+.
T Consensus 85 -------------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 85 -------------------------------------------DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp -------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred -------------------------------------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 2245777788 6643 344444 67788999999999
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
|+..+.+. .|.+||+..+. .+.+..+. ..+..+.|+|||+.++..
T Consensus 122 l~s~~~d~-------------~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~-------- 167 (312)
T 4ery_A 122 IVSGSFDE-------------SVRIWDVKTGKCLKTLPAHS-------------DPVSAVHFNRDGSLIVSS-------- 167 (312)
T ss_dssp EEEEETTS-------------CEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEEeCCC-------------cEEEEECCCCEEEEEecCCC-------------CcEEEEEEcCCCCEEEEE--------
Confidence 98877443 89999998543 34443321 234678999999866554
Q ss_pred cccccccCCeEEEEecCCCCCCCc-eEEe-ecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGP-EILH-KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~-~~l~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 502 (953)
+..+.+.+||+ ..++. ..+. .....+..+.|+|+|+.|+....++ .+.++|+.++ +........
T Consensus 168 -----~~d~~i~~wd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~--~~~~~~~~~ 233 (312)
T 4ery_A 168 -----SYDGLCRIWDT---ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN----TLKLWDYSKG--KCLKTYTGH 233 (312)
T ss_dssp -----ETTSCEEEEET---TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT----EEEEEETTTT--EEEEEECSS
T ss_pred -----eCCCcEEEEEC---CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC----eEEEEECCCC--cEEEEEEec
Confidence 44567899996 33332 2232 2233456689999999988876543 5666677664 222222222
Q ss_pred CccccCCCCCCCeEec-cCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEe
Q 002209 503 SEDVYSDPGSPMMRRT-STGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVA 581 (953)
Q Consensus 503 ~~~~~~~~~~p~~~~S-pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~ 581 (953)
....+. ....++ ++|++|+....+ ..|++||+.+++.......... .+..
T Consensus 234 ~~~~~~----~~~~~~~~~~~~l~sg~~d---------------------g~i~vwd~~~~~~~~~~~~h~~----~v~~ 284 (312)
T 4ery_A 234 KNEKYC----IFANFSVTGGKWIVSGSED---------------------NLVYIWNLQTKEIVQKLQGHTD----VVIS 284 (312)
T ss_dssp CCSSSC----CCEEEECSSSCEEEECCTT---------------------SCEEEEETTTCCEEEEECCCSS----CEEE
T ss_pred CCceEE----EEEEEEeCCCcEEEEECCC---------------------CEEEEEECCCchhhhhhhccCC----cEEE
Confidence 111110 012343 566666554321 2499999998887655543322 1111
Q ss_pred eccCCccccccccCCEEEEEE
Q 002209 582 LMSDQTEGDLYLNQLKILTSK 602 (953)
Q Consensus 582 ~~~~~~~~~~s~dg~~l~~~~ 602 (953)
.+|+|++..++...
T Consensus 285 -------~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 285 -------TACHPTENIIASAA 298 (312)
T ss_dssp -------EEECSSSSEEEEEE
T ss_pred -------EeecCcCCceEEEE
Confidence 36788888766543
No 231
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.56 E-value=1.4e-12 Score=152.11 Aligned_cols=310 Identities=13% Similarity=0.084 Sum_probs=182.1
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEc--cCCCCCCceeeeecCCCC
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQL--FPDGKLGQEIEIQGFPDG 188 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~--~~~g~~~~~~~l~~~~~~ 188 (953)
+..++|||||++|+....+ +.|.+||+ .+ ++ .+..++.+
T Consensus 181 ~~~v~~spdg~~l~v~~~d---------------------------------~~V~v~D~~~~t----~~--~~~~i~~g 221 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD---------------------------------ARIDMIDLWAKE----PT--KVAEIKIG 221 (543)
T ss_dssp EEEEEECTTSCEEEEEETT---------------------------------SEEEEEETTSSS----CE--EEEEEECC
T ss_pred cceEEECCCCCEEEEECCC---------------------------------CeEEEEECcCCC----Cc--EEEEEecC
Confidence 3456789999888777653 36789998 32 22 12223344
Q ss_pred CcccceEecc----CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcc-------ccccccceEEecCCeE
Q 002209 189 AKLNFVTWSQ----DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY-------LNAIFDNFVWVNNSTL 257 (953)
Q Consensus 189 ~~~~~~~wSP----DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~-------~~~~~~~~~wspDg~~ 257 (953)
......+||| ||++|+.... ....|.++|..+++..+........ ....+..+.+|||++.
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~--------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAY--------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEE--------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEc--------cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 5678899999 9999877543 1457888899888765543321100 0001457889998887
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce---eEeCCCCc
Q 002209 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV---KEIGPPAV 333 (953)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~---~~l~~~~~ 333 (953)
++++.. ..+.|+++|. +++. ..+.....
T Consensus 294 ~~vs~~------------------------------------------------~~g~i~vvd~~~~~~l~~~~i~~~~~ 325 (543)
T 1nir_A 294 FIVNVK------------------------------------------------ETGKVLLVNYKDIDNLTVTSIGAAPF 325 (543)
T ss_dssp EEEEET------------------------------------------------TTTEEEEEECTTSSSCEEEEEECCSS
T ss_pred EEEEEC------------------------------------------------CCCeEEEEEecCCCcceeEEeccCcC
Confidence 776510 3357889998 5432 23333356
Q ss_pred ccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceee-ccCCCC
Q 002209 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINW-RSDKPS 412 (953)
Q Consensus 334 ~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~w-spDg~~ 412 (953)
...+.|||||++++.+... .+.|.+||+.+++........ ..|. .+ +...| +||+..
T Consensus 326 ~~~~~~spdg~~l~va~~~------------~~~v~v~D~~tg~l~~~i~~g---~~ph------~g-~g~~~~~p~~g~ 383 (543)
T 1nir_A 326 LHDGGWDSSHRYFMTAANN------------SNKVAVIDSKDRRLSALVDVG---KTPH------PG-RGANFVHPKYGP 383 (543)
T ss_dssp CCCEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECS---SSBC------CT-TCEEEEETTTEE
T ss_pred ccCceECCCCCEEEEEecC------------CCeEEEEECCCCeEEEeeccC---CCCC------CC-CCcccCCCCCcc
Confidence 7788999999998776632 238999999876654322211 0111 00 22334 688655
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEecCCCCC----CC-ceEEeecccccCCeeeccCCceEEEEEeccc---CceEEE
Q 002209 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG----EG-PEILHKLDLRYGGISWCDDSLALVYESWYKT---RRTRTW 484 (953)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g----~~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~l~ 484 (953)
++.. .. ...+.|.+|+.++... .+ .+.+..+......+.++|||++|+.....+. ....|.
T Consensus 384 ~~~s-~~----------~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 384 VWST-SH----------LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp EEEE-EB----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE
T ss_pred EEEe-cc----------CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEE
Confidence 4332 11 1245788888622111 22 2334333344566899999999987652111 122688
Q ss_pred EEcCCCCCCCcEEeec-------CCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEE
Q 002209 485 VISPGSKDVAPRILFD-------RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (953)
Q Consensus 485 ~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 557 (953)
++|.++++.....+.- .....+.. +.|+|||++|++...... . ....|.+|
T Consensus 453 v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~g~~~~~s~~~~~-------------~---~~~~i~v~ 510 (543)
T 1nir_A 453 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ------PEYNKRGDEVWFSVWNGK-------------N---DSSALVVV 510 (543)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCEEEE------EEECSSSSEEEEEEECCT-------------T---SCCEEEEE
T ss_pred EEECCCCCCCeEEeechhhcccCCCCCceEe------ccCCCCCCEEEEEeecCC-------------C---CCCeEEEE
Confidence 8888876422133210 11111111 789999999998864210 0 12348999
Q ss_pred ECCCCceEEEecc
Q 002209 558 DINTGSKERIWES 570 (953)
Q Consensus 558 d~~~~~~~~l~~~ 570 (953)
|.+|++.......
T Consensus 511 D~~t~~~~~~i~~ 523 (543)
T 1nir_A 511 DDKTLKLKAVVKD 523 (543)
T ss_dssp ETTTTEEEEEECC
T ss_pred ECCCceEEEeecC
Confidence 9999988766553
No 232
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.56 E-value=8.6e-13 Score=140.38 Aligned_cols=255 Identities=11% Similarity=0.074 Sum_probs=173.7
Q ss_pred eecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCcccce
Q 002209 115 SFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFV 194 (953)
Q Consensus 115 ~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~ 194 (953)
-|+.||++|.|.... . . ..||..+. +| ...++|+. ...-
T Consensus 20 ~~~~~g~~iy~~n~~-----------------------d--~------~~ly~~~~--dg--~~~~~l~~------~~~~ 58 (302)
T 3s25_A 20 LFCESDGEVFFSNTN-----------------------D--N------GRLYAMNI--DG--SNIHKLSN------DTAM 58 (302)
T ss_dssp CEEEETTEEEEEEGG-----------------------G--T------TEEEEEET--TS--CSCEEEEE------EEEE
T ss_pred EEEEeCCEEEEEeCC-----------------------C--C------ceEEEEcC--CC--CCCEEccC------Ccee
Confidence 478999999998752 1 1 25777776 55 44666653 1234
Q ss_pred EeccCCCeEEEEEeeccccCC-----CCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 195 TWSQDGKHLAFSIRIDAEDSS-----SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 195 ~wSPDG~~laf~~~~~~~~~~-----~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
-+++||++|+|+......... .....||+++++|++.++|+... ...|+++|++|+|+...
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~---------~~~~s~~g~~Iy~~~~~----- 124 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP---------CIYASLIGNYIYYLHYD----- 124 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC---------EEEEEEETTEEEEEEES-----
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC---------ccEEEEeCCEEEEEeec-----
Confidence 568999999998764310000 12578999999999888886533 23689999999998100
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCC-ceeEeCCCCcccccccCCCCcEEEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIGPPAVYTSLDPSPDEKYILI 348 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g-~~~~l~~~~~~~~~~~SpDG~~l~~ 348 (953)
.+ +...|++++++| ..++|+.... ..++|||++|+|
T Consensus 125 ---------------------------------~~-------~~~~Iy~~~~dGs~~~~lt~~~~---~~~~~~g~~iy~ 161 (302)
T 3s25_A 125 ---------------------------------TQ-------TATSLYRIRIDGEEKKKIKNHYL---FTCNTSDRYFYY 161 (302)
T ss_dssp ---------------------------------SS-------SCEEEEEEETTSCCCEEEESSCC---CCSEEETTEEEE
T ss_pred ---------------------------------CC-------CCceEEEEECCCCCeEEEeCCCc---eEeeEECCEEEE
Confidence 00 346899999944 6677776522 567999999999
Q ss_pred EEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002209 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (953)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (953)
+... ...|++.+++|+..+.|...+ ....++|+|+.|+|. +..
T Consensus 162 t~~g------------~~~Iy~~~l~g~~~~~l~~~~----------------~~~~~~P~g~~iy~t-~~~-------- 204 (302)
T 3s25_A 162 NNPK------------NGQLYRYDTASQSEALFYDCN----------------CYKPVVLDDTNVYYM-DVN-------- 204 (302)
T ss_dssp ECTT------------TCCEEEEETTTTEEEEEECSC----------------EEEEEEEETTEEEEE-EGG--------
T ss_pred EeCC------------CceEEEEECCCCCEEEEeCCC----------------ccceeeecCCEEEEE-EcC--------
Confidence 9741 238999999998888775421 112355999988665 221
Q ss_pred cccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccC
Q 002209 429 VTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYS 508 (953)
Q Consensus 429 ~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 508 (953)
....|++.++ +|+..+.|+.... +.|+|+|++|+|...... ..|+.+++++. ..+.+.....
T Consensus 205 --~~~~I~~~~l---dG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~--~r~~l~~~~~----- 266 (302)
T 3s25_A 205 --RDNAIVHVNI---NNPNPVVLTEANI----EHYNVYGSLIFYQRGGDN--PALCVVKNDGT--GFKELAKGEF----- 266 (302)
T ss_dssp --GTTEEEEECS---SSCCCEECSCSCE----EEEEEETTEEEEEECSSS--CEEEEEETTSC--CCEEEEESCE-----
T ss_pred --CCcEEEEEEC---CCCCeEEEeCCCc----ceEEECCCEEEEEECCCC--cEEEEEECCCC--ccEEeeCCcc-----
Confidence 1247999986 8888888865432 569999999998765443 48999999985 4455544321
Q ss_pred CCCCCCeEeccCCCEEEEEe
Q 002209 509 DPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 509 ~~~~p~~~~SpDG~~l~~~~ 528 (953)
..+++.|.+|+|..
T Consensus 267 ------~~i~i~~d~Iy~td 280 (302)
T 3s25_A 267 ------CNINVTSQYVYFTD 280 (302)
T ss_dssp ------EEEEECSSEEEEEE
T ss_pred ------ceEEEeCCEEEEEE
Confidence 34677888888886
No 233
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.56 E-value=8.6e-13 Score=144.51 Aligned_cols=257 Identities=13% Similarity=0.116 Sum_probs=153.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|++...+ + +.|.+|++..++ +..+.+..++...
T Consensus 39 ~~~~~~~spdg~~l~~~~~~------------------------~--------~~v~~~~~~~~~--~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRP------------------------E--------FRVLAYRIAPDD--GALTFAAESALPG 84 (343)
T ss_dssp CCCCEEECTTSSEEEEEETT------------------------T--------TEEEEEEECTTT--CCEEEEEEEECSS
T ss_pred CCceEEECCCCCEEEEeecC------------------------C--------CeEEEEEecCCC--CceeeccccccCC
Confidence 56689999999999888763 0 156888884212 3333333233223
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCC---ceeecccCCCccccccccceEEecCCeEEEEEecCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG---KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g---~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 266 (953)
.+..++|||||++|++... ....|++++++.+ +.......... +..++|+|||+.|+++..
T Consensus 85 ~~~~~~~s~dg~~l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~--- 148 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSY--------NAGNVSVTRLEDGLPVGVVDVVEGLDG-----CHSANISPDNRTLWVPAL--- 148 (343)
T ss_dssp CCSEEEECTTSSEEEEEET--------TTTEEEEEEEETTEEEEEEEEECCCTT-----BCCCEECTTSSEEEEEEG---
T ss_pred CCcEEEEcCCCCEEEEEec--------CCCeEEEEECCCCccccccccccCCCC-----ceEEEECCCCCEEEEecC---
Confidence 6788999999999888652 1345666666333 22222222221 568899999998886610
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C-CceeE-----eCC--CCccccc
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-GTVKE-----IGP--PAVYTSL 337 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~-g~~~~-----l~~--~~~~~~~ 337 (953)
....|+++++ + |+... +.. ......+
T Consensus 149 ---------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 149 ---------------------------------------------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp ---------------------------------------------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred ---------------------------------------------CCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 2246778887 5 65542 221 1456678
Q ss_pred ccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc--CceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD--GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 338 ~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~--g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
+|+|||++|+++... .+.+.+|+++ ++..+.+..... .+..+.. ...+..++|+|||+.+++
T Consensus 184 ~~~pdg~~l~~~~~~------------~~~i~~~~~~~~~g~~~~~~~~~~---~~~~~~~-~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 184 VFHPNEQYAYCVNEL------------NSSVDVWELKDPHGNIECVQTLDM---MPENFSD-TRWAADIHITPDGRHLYA 247 (343)
T ss_dssp EECTTSSEEEEEETT------------TTEEEEEESSCTTSCCEEEEEEEC---SCTTCCS-CCCEEEEEECTTSSEEEE
T ss_pred EECCCCCEEEEEeCC------------CCEEEEEEecCCCCcEEEEeeccc---cCccccc-cCCccceEECCCCCEEEE
Confidence 999999998877622 2379999985 333322211110 0100000 012346899999987654
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe--ecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
. . ...+.+.+|+++ ..++..+.+. ........++|+|||++|+++...+ ....+|.++.+++
T Consensus 248 ~-~-----------~~~~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~v~~~d~~~g 311 (343)
T 1ri6_A 248 C-D-----------RTASLITVFSVS-EDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS-HHISVYEIVGEQG 311 (343)
T ss_dssp E-E-----------TTTTEEEEEEEC-TTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTT-CEEEEEEEETTTT
T ss_pred E-e-----------cCCCEEEEEEEc-CCCCceEEeeeecCCCccceEEECCCCCEEEEecCCC-CeEEEEEEcCCCc
Confidence 4 1 224578888861 1134444432 2233467899999999988876433 3357888888775
No 234
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.56 E-value=2.9e-14 Score=151.67 Aligned_cols=176 Identities=19% Similarity=0.170 Sum_probs=117.1
Q ss_pred HHHHHHHcCcEEEEcCCCCCCCCCChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC
Q 002209 704 SVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP 781 (953)
Q Consensus 704 ~~~~la~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p 781 (953)
....|+++||.|++ +|.+|+|.+.... .......+|+.++++.+ +.+++.|+||||||.+++.++.++|
T Consensus 42 ~~~~L~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p 112 (279)
T 1hkh_A 42 QTRELLAQGYRVIT---YDRRGFGGSSKVNTGYDYDTFAADLHTVLETL------DLRDVVLVGFSMGTGELARYVARYG 112 (279)
T ss_dssp HHHHHHHTTEEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHHC
T ss_pred hHHHHHhCCcEEEE---eCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceEEEEeChhHHHHHHHHHHcC
Confidence 45567889999999 4556778775432 23566778888887775 2358999999999999999999999
Q ss_pred C-cccEEEEcccCCCCCCC----CcCcccc-----------cc-hhh--------h---------hH---HHHH------
Q 002209 782 H-LFCCGIARSGAYNRTLT----PFGFQNE-----------DR-TLW--------E---------AT---STYV------ 818 (953)
Q Consensus 782 ~-~~~a~v~~~~~~d~~~~----~~~~~~~-----------~~-~~~--------~---------~~---~~~~------ 818 (953)
+ +++++|++++....... ....... .. ..+ . .. +.+.
T Consensus 113 ~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (279)
T 1hkh_A 113 HERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGS 192 (279)
T ss_dssp STTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTS
T ss_pred ccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccC
Confidence 8 99999999874321110 0000000 00 000 0 00 0000
Q ss_pred ------------hcCcccccCCC---CCcEEEEEeCCCCCCCCchHHH-HHHHHHHHhCCCcEEEEEeCCCCccCCCccc
Q 002209 819 ------------EMSPFMSANKL---KKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGALCRLVILPFESHGYAARES 882 (953)
Q Consensus 819 ------------~~sp~~~~~~i---~~P~Li~~G~~D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 882 (953)
..+....+.++ ++|+|++||++|..+| ++.+ ..+.+.+.. .++++++++||... .++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~----~~~~~i~~~gH~~~-~e~ 265 (279)
T 1hkh_A 193 APVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP--IDATARRFHQAVPE----ADYVEVEGAPHGLL-WTH 265 (279)
T ss_dssp CTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC--TTTTHHHHHHHCTT----SEEEEETTCCTTHH-HHT
T ss_pred cHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCC--hHHHHHHHHHhCCC----eeEEEeCCCCccch-hcC
Confidence 00111234556 8999999999999998 7776 666665533 58899999999863 456
Q ss_pred HHHHHHHHHHHHH
Q 002209 883 IMHVLWETDRWLQ 895 (953)
Q Consensus 883 ~~~~~~~i~~fl~ 895 (953)
.+.+.+.+.+||.
T Consensus 266 p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 266 ADEVNAALKTFLA 278 (279)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 7788888888875
No 235
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.56 E-value=1.2e-12 Score=144.51 Aligned_cols=268 Identities=10% Similarity=0.105 Sum_probs=164.0
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|+|||++|+..+ ....|.++|..+++.......+... +..++|+|||+.|+...
T Consensus 65 ~~V~~~~~s~d~~~l~s~s---------~Dg~v~vWd~~~~~~~~~~~~~~~~----v~~~~~sp~g~~lasg~------ 125 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSS---------QDGKVIVWDSFTTNKEHAVTMPCTW----VMACAYAPSGCAIACGG------ 125 (354)
T ss_dssp SCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTCCEEEEEECSSSC----CCEEEECTTSSEEEEES------
T ss_pred CeEEEEEECCCCCEEEEEe---------CCCeEEEEECCCCCcceEEecCCCC----EEEEEECCCCCEEEEee------
Confidence 4689999999999988755 2567888898877654433333322 67899999999998761
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-------ceeEeCCC-Cccccccc
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-------TVKEIGPP-AVYTSLDP 339 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-------~~~~l~~~-~~~~~~~~ 339 (953)
..+.+.++++ .+ ....+... ..+..+.|
T Consensus 126 -------------------------------------------~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 126 -------------------------------------------LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp -------------------------------------------TTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred -------------------------------------------CCCCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 1122333333 11 12222222 56778999
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeecc--CCCCceEE
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRS--DKPSTLYW 416 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp--Dg~~i~~~ 416 (953)
+||++.|+..+.+. .|.+||++.++ .+.+..+. ..+..+.|+| +|+.++..
T Consensus 163 ~~~~~~l~t~s~D~-------------~v~lwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 163 TNSDMQILTASGDG-------------TCALWDVESGQLLQSFHGHG-------------ADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp CSSSSEEEEEETTS-------------EEEEEETTTCCEEEEEECCS-------------SCEEEEEECCCSSCCEEEEE
T ss_pred eCCCCEEEEEeCCC-------------cEEEEeCCCCeEEEEEcCCC-------------CCeEEEEEEeCCCCCEEEEE
Confidence 99999999887443 89999998554 33443322 2234567776 45554443
Q ss_pred EEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcE
Q 002209 417 AETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (953)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (953)
+..+.+.+||+ .++.....+..+...+..++|+|+|+.|+..+.++ .+.++|+.++ ...
T Consensus 217 -------------s~Dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~----~v~lwd~~~~--~~~ 275 (354)
T 2pbi_B 217 -------------GCDKKAMVWDM--RSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA----TCRLYDLRAD--REV 275 (354)
T ss_dssp -------------ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTT--EEE
T ss_pred -------------eCCCeEEEEEC--CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC----eEEEEECCCC--cEE
Confidence 34568999996 23332334555667788899999999988876554 2444455443 222
Q ss_pred EeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccce
Q 002209 497 ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYY 576 (953)
Q Consensus 497 ~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~ 576 (953)
......... . +...+.|+|||++|+....+ ..+++||+.+++..........
T Consensus 276 ~~~~~~~~~-~---~~~~~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~~l~~h~~--- 327 (354)
T 2pbi_B 276 AIYSKESII-F---GASSVDFSLSGRLLFAGYND---------------------YTINVWDVLKGSRVSILFGHEN--- 327 (354)
T ss_dssp EEECCTTCC-S---CEEEEEECTTSSEEEEEETT---------------------SCEEEEETTTCSEEEEECCCSS---
T ss_pred EEEcCCCcc-c---ceeEEEEeCCCCEEEEEECC---------------------CcEEEEECCCCceEEEEECCCC---
Confidence 222211100 0 00117899999998877632 2499999987765443332211
Q ss_pred eeeEeeccCCccccccccCCEEEEE
Q 002209 577 ETTVALMSDQTEGDLYLNQLKILTS 601 (953)
Q Consensus 577 ~~~~~~~~~~~~~~~s~dg~~l~~~ 601 (953)
.+. ..+|+|||+.++..
T Consensus 328 -~v~-------~l~~spdg~~l~sg 344 (354)
T 2pbi_B 328 -RVS-------TLRVSPDGTAFCSG 344 (354)
T ss_dssp -CEE-------EEEECTTSSCEEEE
T ss_pred -cEE-------EEEECCCCCEEEEE
Confidence 122 24689999876643
No 236
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.56 E-value=8.9e-15 Score=155.88 Aligned_cols=190 Identities=13% Similarity=0.041 Sum_probs=126.3
Q ss_pred cCCCCCCcEEEEEeChHHHHHHHHHHhCCCccc-EEEEcccCCCCCCCC---cCcccc---cchhhhhHHHHHhcCcccc
Q 002209 753 RGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC-CGIARSGAYNRTLTP---FGFQNE---DRTLWEATSTYVEMSPFMS 825 (953)
Q Consensus 753 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~-a~v~~~~~~d~~~~~---~~~~~~---~~~~~~~~~~~~~~sp~~~ 825 (953)
+..+|++||+|+|+|+||+||+.+++.+|++|+ +++++++........ ..+... ....++........+++..
T Consensus 5 ~~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (318)
T 2d81_A 5 AFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIAS 84 (318)
T ss_dssp CCCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCC
T ss_pred hcCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCCh
Confidence 345899999999999999999999999999999 887776532111100 000000 0011111111111146666
Q ss_pred cCCCC-CcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCC--cEEEEEeCCCCccCCCccc------------------HH
Q 002209 826 ANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGA--LCRLVILPFESHGYAARES------------------IM 884 (953)
Q Consensus 826 ~~~i~-~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~H~~~~~~~------------------~~ 884 (953)
+.+++ .|+||+||++|.+|| +.++++++++|++.+. +++++.+++++|.+..... ..
T Consensus 85 ~~~l~~~Pvli~HG~~D~vVP--~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~ 162 (318)
T 2d81_A 85 VANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNY 162 (318)
T ss_dssp GGGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSS
T ss_pred hHcCCCCcEEEEeCCCCCCcC--HHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCC
Confidence 66654 599999999999999 9999999999998873 7999999999998642221 14
Q ss_pred HHHHHHHHHHHHhccCCCC-CCCcc---cccC-cccccCCCCCCCCceEEccCCCCc-cc-ceeeeeecc
Q 002209 885 HVLWETDRWLQKYCVSNTA-DRSTD---LKVS-KDDESKGAPHLQNKTVAASGGGGT-EA-DFEHDGCHL 947 (953)
Q Consensus 885 ~~~~~i~~fl~~~l~~~~~-~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 947 (953)
.....|++||...+.+... ..... ++|. .+ ..........++++.+|.. .. |..|+++|-
T Consensus 163 d~~~~i~~ff~g~~~~~~~~~~~~~~~~~~q~~~f---~~~~~~~~~~~yvP~~~~~~~~~~~l~v~lHG 229 (318)
T 2d81_A 163 DGAGAALKWIYGSLNARNTGTLSGSVLSFAQSGSY---GANGMDTTGYLYVPQSCASGATVCSLHVALHG 229 (318)
T ss_dssp CHHHHHHHHHHSSCCCCCCSSCSSEEEEEECCGGG---CCTTBCSEEEEEECHHHHSSSSCEEEEEEECC
T ss_pred hHHHHHHHHHhccCCCCccccccccccccccccCc---CCCCCCcceEEEecCCCCCCCCCCCEEEEecC
Confidence 5677899999887654322 12211 3333 12 1123445566889988864 44 889999995
No 237
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.56 E-value=1.6e-14 Score=153.12 Aligned_cols=220 Identities=10% Similarity=0.072 Sum_probs=133.5
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEc
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (953)
.+...++..+| .+..+...+ ..|+||++||..... ..| ......|+++||.|+++
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~---------~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~~ 57 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG---------EGAPLLMIHGNSSSG-----------AIF----APQLEGEIGKKWRVIAP 57 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC---------CEEEEEEECCTTCCG-----------GGG----HHHHHSHHHHHEEEEEE
T ss_pred eEEEEEEcCCc-eEEEEecCC---------CCCeEEEECCCCCch-----------hHH----HHHHhHHHhcCCeEEee
Confidence 34555666555 554433211 267899999963211 111 23344557789999995
Q ss_pred CCCCCCCCCChhhh-----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 719 PTTPIIGEGDEEAN-----DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 719 ~~~~~~G~G~~~~~-----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
| .+|+|.+... .........|+.++++.+ +.+++.|+|||+||.+++.++.++|+ +.++|+.++.
T Consensus 58 d---~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~ 127 (279)
T 4g9e_A 58 D---LPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL------GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTP 127 (279)
T ss_dssp C---CTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH------TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCC
T ss_pred c---CCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh------CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCC
Confidence 4 4677777542 112455566666665554 23589999999999999999999998 6666666554
Q ss_pred CCCCCC---------CcCccccc-------------------chhh-hh------------HHHHHh---cCcccccCCC
Q 002209 794 YNRTLT---------PFGFQNED-------------------RTLW-EA------------TSTYVE---MSPFMSANKL 829 (953)
Q Consensus 794 ~d~~~~---------~~~~~~~~-------------------~~~~-~~------------~~~~~~---~sp~~~~~~i 829 (953)
...... ........ ...+ .. ...+.. .+....+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 207 (279)
T 4g9e_A 128 PVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEA 207 (279)
T ss_dssp CCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHC
T ss_pred CCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhc
Confidence 221100 00000000 0000 00 000000 1112235668
Q ss_pred CCcEEEEEeCCCCCCCCchHHHHHHH-HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccC
Q 002209 830 KKPILLVHGEEDNNSGTLTMQSDRFF-NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (953)
Q Consensus 830 ~~P~Li~~G~~D~~v~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (953)
++|+|+++|++|..+| ++.+.+++ +.+. .+++++++++||.. ..+....+.+.+.+||.+....
T Consensus 208 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~----~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 208 QLPIAVVNGRDEPFVE--LDFVSKVKFGNLW----EGKTHVIDNAGHAP-FREAPAEFDAYLARFIRDCTQL 272 (279)
T ss_dssp CSCEEEEEETTCSSBC--HHHHTTCCCSSBG----GGSCEEETTCCSCH-HHHSHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEcCCCcccc--hHHHHHHhhccCC----CCeEEEECCCCcch-HHhCHHHHHHHHHHHHHHhhhh
Confidence 8999999999999998 77776665 3322 35788999999985 3566788889999999987643
No 238
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.56 E-value=1.3e-14 Score=153.05 Aligned_cols=211 Identities=12% Similarity=0.113 Sum_probs=135.9
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCCC
Q 002209 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGE 726 (953)
Q Consensus 648 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~ 726 (953)
+|..++....- +.|+||++||.+... ..| ......|++ +||.|+++ +.+|+
T Consensus 9 ~g~~l~y~~~g----------~~~~vv~lhG~~~~~-----------~~~----~~~~~~l~~~~g~~v~~~---d~~G~ 60 (272)
T 3fsg_A 9 TRSNISYFSIG----------SGTPIIFLHGLSLDK-----------QST----CLFFEPLSNVGQYQRIYL---DLPGM 60 (272)
T ss_dssp CTTCCEEEEEC----------CSSEEEEECCTTCCH-----------HHH----HHHHTTSTTSTTSEEEEE---CCTTS
T ss_pred cCCeEEEEEcC----------CCCeEEEEeCCCCcH-----------HHH----HHHHHHHhccCceEEEEe---cCCCC
Confidence 66666654431 146799999953110 001 112223444 69999995 44677
Q ss_pred CChhhhh-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCc----
Q 002209 727 GDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF---- 801 (953)
Q Consensus 727 G~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~---- 801 (953)
|.+.... ......+.|+.++++.+. +.+++.|+||||||.+++.++.++|++++++|+++|.........
T Consensus 61 G~s~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 135 (272)
T 3fsg_A 61 GNSDPISPSTSDNVLETLIEAIEEII-----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGK 135 (272)
T ss_dssp TTCCCCSSCSHHHHHHHHHHHHHHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCcccccccc
Confidence 7765433 345667778777777742 236899999999999999999999999999999998753211000
Q ss_pred -------Cccc----cc------------chhhhhH-------------HHHHh---c-----CcccccCCCCCcEEEEE
Q 002209 802 -------GFQN----ED------------RTLWEAT-------------STYVE---M-----SPFMSANKLKKPILLVH 837 (953)
Q Consensus 802 -------~~~~----~~------------~~~~~~~-------------~~~~~---~-----sp~~~~~~i~~P~Li~~ 837 (953)
.+.. .. ...+... ..+.. . .+...+.++++|+|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 215 (272)
T 3fsg_A 136 HINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMV 215 (272)
T ss_dssp CCCEECSCCCCCTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEE
T ss_pred chhhhhhhhhcccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEE
Confidence 0000 00 0000000 00000 0 00113467899999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
|++|..+| ++.+.++.+.+. .+++++++++||... .+..+.+.+.+.+||++..
T Consensus 216 g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 216 GRNDQVVG--YQEQLKLINHNE----NGEIVLLNRTGHNLM-IDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp ETTCTTTC--SHHHHHHHTTCT----TEEEEEESSCCSSHH-HHTHHHHHHHHHHHHHHHH
T ss_pred eCCCCcCC--HHHHHHHHHhcC----CCeEEEecCCCCCch-hcCHHHHHHHHHHHHHHhh
Confidence 99999998 888877766553 479999999999864 4567788889999998754
No 239
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.56 E-value=4.8e-14 Score=157.02 Aligned_cols=71 Identities=10% Similarity=0.116 Sum_probs=60.1
Q ss_pred ccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC-CCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 825 SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF-ESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 825 ~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
.+.++++|+|+++|++|..+| +..++++++.+++.+..++++++++ +||... .+..+.+.+.+.+||++++
T Consensus 302 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 302 ALSNVEANVLMIPCKQDLLQP--SRYNYKMVDLLQKQGKYAEVYEIESINGHMAG-VFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHTCCSEEEEECBTTCSSSC--THHHHHHHHHHHHTTCCEEECCBCCTTGGGHH-HHCGGGTHHHHHHHHHSCC
T ss_pred HHhhCCCCEEEEecCCccccC--HHHHHHHHHHHHhcCCCceEEEcCCCCCCcch-hcCHHHHHHHHHHHHHhhh
Confidence 456789999999999999998 9999999999988777789999998 999753 3455678888999998765
No 240
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.55 E-value=4.5e-14 Score=150.75 Aligned_cols=216 Identities=16% Similarity=0.105 Sum_probs=133.2
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
+...+|..++....-++ ..|+||++||..... .....|. .....|+ ++|.|+++ |.
T Consensus 11 ~~~~~g~~l~y~~~g~~--------g~p~vvllHG~~~~~-----------~~~~~~~-~~~~~L~-~~~~vi~~---D~ 66 (285)
T 1c4x_A 11 RFPSGTLASHALVAGDP--------QSPAVVLLHGAGPGA-----------HAASNWR-PIIPDLA-ENFFVVAP---DL 66 (285)
T ss_dssp EECCTTSCEEEEEESCT--------TSCEEEEECCCSTTC-----------CHHHHHG-GGHHHHH-TTSEEEEE---CC
T ss_pred EEEECCEEEEEEecCCC--------CCCEEEEEeCCCCCC-----------cchhhHH-HHHHHHh-hCcEEEEe---cC
Confidence 34457777776554211 147799999952000 0011111 1233444 45999994 55
Q ss_pred CCCCChhhhh---hhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 724 IGEGDEEAND---RFVEQL----VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 724 ~G~G~~~~~~---~~~~~~----~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
+|+|.+.... ...... ++|+.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++....
T Consensus 67 ~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 140 (285)
T 1c4x_A 67 IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF------GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAP 140 (285)
T ss_dssp TTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSC
T ss_pred CCCCCCCCCCCcccchhhhhhhHHHHHHHHHHHh------CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCC
Confidence 6777774432 224444 66666666554 2358999999999999999999999999999999875421
Q ss_pred CCC--C-----cCc-----------------ccccc-----h----hhh---hHHH---HHh-----c-------Ccccc
Q 002209 797 TLT--P-----FGF-----------------QNEDR-----T----LWE---ATST---YVE-----M-------SPFMS 825 (953)
Q Consensus 797 ~~~--~-----~~~-----------------~~~~~-----~----~~~---~~~~---~~~-----~-------sp~~~ 825 (953)
... . ..+ ..... . .+. .+.. +.. . .....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T 1c4x_A 141 MNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPAT 220 (285)
T ss_dssp CSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHH
T ss_pred CCccchhHHHHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhh
Confidence 100 0 000 00000 0 000 0000 000 0 01234
Q ss_pred cCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 826 ~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+.++++|+|+++|++|..+| +..++++++.+. ..++++++++||... .+..+.+.+.+.+||.+
T Consensus 221 l~~i~~P~lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 221 LGRLPHDVLVFHGRQDRIVP--LDTSLYLTKHLK----HAELVVLDRCGHWAQ-LERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HTTCCSCEEEEEETTCSSSC--THHHHHHHHHCS----SEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHC
T ss_pred hccCCCCEEEEEeCCCeeeC--HHHHHHHHHhCC----CceEEEeCCCCcchh-hcCHHHHHHHHHHHHhc
Confidence 57789999999999999998 888888777653 368999999999763 45667788888888863
No 241
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.55 E-value=4.3e-14 Score=141.37 Aligned_cols=184 Identities=9% Similarity=-0.105 Sum_probs=114.7
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc-CcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~ 747 (953)
+.|+||++||+..... ....+.......|+++ ||.|+.+|++ |.+.. ... ..+
T Consensus 3 ~~p~vv~lHG~~~~~~-----------~~~~~~~~~~~~l~~~~g~~vi~~d~~---g~~~~--------~~~----~~~ 56 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDV-----------TTHGWYGWVKKELEKIPGFQCLAKNMP---DPITA--------RES----IWL 56 (194)
T ss_dssp CCCEEEEECCSSSSCT-----------TTSTTHHHHHHHHTTSTTCCEEECCCS---STTTC--------CHH----HHH
T ss_pred CCCEEEEECCCCCCCc-----------ccchHHHHHHHHHhhccCceEEEeeCC---CCCcc--------cHH----HHH
Confidence 3689999999632100 0011112234566666 9999996665 43211 112 223
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccC
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSAN 827 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 827 (953)
+.+.+.-.+ .+++.|+||||||.+++.++.++| ++++|+++|......... ......+. .......+.
T Consensus 57 ~~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~ 124 (194)
T 2qs9_A 57 PFMETELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN---ERASGYFT------RPWQWEKIK 124 (194)
T ss_dssp HHHHHTSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH---HHHTSTTS------SCCCHHHHH
T ss_pred HHHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh---hHHHhhhc------ccccHHHHH
Confidence 333333222 268999999999999999999998 999999998754211000 00000000 000111223
Q ss_pred CCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 828 KLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 828 ~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
++..|+|+++|++|..+| ++.+.++.+.+ . .++++++++||.+. .+.. +.+..+++||++...
T Consensus 125 ~~~~p~lii~G~~D~~vp--~~~~~~~~~~~-~----~~~~~~~~~gH~~~-~~~p-~~~~~~~~fl~~~~~ 187 (194)
T 2qs9_A 125 ANCPYIVQFGSTDDPFLP--WKEQQEVADRL-E----TKLHKFTDCGHFQN-TEFH-ELITVVKSLLKVPAL 187 (194)
T ss_dssp HHCSEEEEEEETTCSSSC--HHHHHHHHHHH-T----CEEEEESSCTTSCS-SCCH-HHHHHHHHHHTCCCC
T ss_pred hhCCCEEEEEeCCCCcCC--HHHHHHHHHhc-C----CeEEEeCCCCCccc-hhCH-HHHHHHHHHHHhhhh
Confidence 346799999999999998 99999998888 3 38899999999875 3333 455666799887543
No 242
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.55 E-value=7.5e-13 Score=151.50 Aligned_cols=192 Identities=11% Similarity=0.045 Sum_probs=124.9
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECC--CCceeeccc---CCCccccccccceEEecCCeEEEEEecC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKARPLFQ---SPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~--~g~~~~lt~---~~~~~~~~~~~~~~wspDg~~l~~~~~~ 264 (953)
.+..++|||||++|+++.. ....|.++++. +++..+... .+. .+..++|+|||+.|+++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~--------~dg~v~iwd~~~~~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~l~~~~-- 168 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD--------SDKSLLVFDVDKTSKNVLKLRKRFCFSK-----RPNAISIAEDDTTVIIAD-- 168 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG--------GGTEEEEEEECSSSSSCEEEEEEEECSS-----CEEEEEECTTSSEEEEEE--
T ss_pred ceEEEEEcCCCCEEEEEEC--------CCCeEEEEECcCCCCceeeeeecccCCC-----CceEEEEcCCCCEEEEEe--
Confidence 4788999999999866543 23456666666 665544432 122 166899999999998761
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-----EeCCC-Cccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-----EIGPP-AVYTSL 337 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-----~l~~~-~~~~~~ 337 (953)
..+.++.+++ +++.. .+... ..+..+
T Consensus 169 -----------------------------------------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 201 (450)
T 2vdu_B 169 -----------------------------------------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDV 201 (450)
T ss_dssp -----------------------------------------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEE
T ss_pred -----------------------------------------------CCCcEEEEecCCcccccccceeeecccCceEEE
Confidence 2356788888 66433 22222 677889
Q ss_pred ccCCC---CcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002209 338 DPSPD---EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (953)
Q Consensus 338 ~~SpD---G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i 413 (953)
+|+|| |++|+..+.+ +.|.+||+..+. ...+.. +....+..++|+ ||+.+
T Consensus 202 ~~sp~~~~~~~l~s~~~d-------------~~i~vwd~~~~~~~~~~~~------------~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 202 HLIKDSDGHQFIITSDRD-------------EHIKISHYPQCFIVDKWLF------------GHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp EEEECTTSCEEEEEEETT-------------SCEEEEEESCTTCEEEECC------------CCSSCEEEEEEC-STTEE
T ss_pred EEcCCCCCCcEEEEEcCC-------------CcEEEEECCCCceeeeeec------------CCCCceEEEEEC-CCCEE
Confidence 99999 9888887744 389999998543 333221 111345679999 99877
Q ss_pred eEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEee-------------------------cccccCCeeeccCC
Q 002209 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHK-------------------------LDLRYGGISWCDDS 467 (953)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~-------------------------~~~~~~~~~~SpDg 467 (953)
+.. +..+.|.+||+ ..++. ..+.. ....+..+.|+|||
T Consensus 256 ~s~-------------~~d~~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 256 LSA-------------GGDDKIFAWDW---KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp EEE-------------ESSSEEEEEET---TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred EEE-------------eCCCeEEEEEC---CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 665 44568999996 43443 33321 12335568999999
Q ss_pred ceEEEEEecccCceEEEEE
Q 002209 468 LALVYESWYKTRRTRTWVI 486 (953)
Q Consensus 468 ~~l~~~~~~~~~~~~l~~~ 486 (953)
+.|++....+ +...+|.+
T Consensus 320 ~~l~~~~~~d-~~i~iw~~ 337 (450)
T 2vdu_B 320 PFVAFFVEAT-KCIIILEM 337 (450)
T ss_dssp SEEEEEETTC-SEEEEEEE
T ss_pred CEEEEEECCC-CeEEEEEe
Confidence 9998876333 32456666
No 243
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.55 E-value=1.3e-12 Score=141.32 Aligned_cols=252 Identities=15% Similarity=0.094 Sum_probs=155.9
Q ss_pred ceEEEEccCCCCCCce-eeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc
Q 002209 164 GIGIHQLFPDGKLGQE-IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~-~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (953)
.|+|||+.+ ++. +.+....+...+....|+|||++|+... ....|.++++++++..+......
T Consensus 46 tV~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs---------~Dg~v~iw~~~~~~~~~~~~~h~--- 109 (318)
T 4ggc_A 46 SVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---------SSAEVQLWDVQQQKRLRNMTSHS--- 109 (318)
T ss_dssp EEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCS---
T ss_pred EEEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEE---------CCCcEEEeecCCceeEEEecCcc---
Confidence 689999854 333 2333222334688999999999998754 35688889999887654433332
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-
Q 002209 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (953)
Q Consensus 243 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~- 321 (953)
.....++++++.++... ....+...+.
T Consensus 110 ---~~~~~~~~~~~~l~s~~-------------------------------------------------~~~~~~~~~~~ 137 (318)
T 4ggc_A 110 ---ARVGSLSWNSYILSSGS-------------------------------------------------RSGHIHHHDVR 137 (318)
T ss_dssp ---SCEEEEEEETTEEEEEE-------------------------------------------------TTSEEEEEETT
T ss_pred ---ceEEEeecCCCEEEEEe-------------------------------------------------cCCceEeeecC
Confidence 22445677777777551 1123334444
Q ss_pred CC--ceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEE--eccCCCcccCCccccc
Q 002209 322 DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE--LCDLPLAEDIPIAFNS 396 (953)
Q Consensus 322 ~g--~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~--l~~~~~~~~~p~~~~~ 396 (953)
.+ ....+... ..+....++++|+.|+....+. .|.+||+..++... +.... .
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-------------~i~iwd~~~~~~~~~~~~~~~----------~ 194 (318)
T 4ggc_A 138 VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-------------LVNVWPSAPGEGGWVPLQTFT----------Q 194 (318)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEESSCBTTBSCCSEEEC----------C
T ss_pred CCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-------------ceeEEECCCCcccccceeeec----------c
Confidence 32 22233333 6677889999999998877443 89999997543211 11100 1
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEec
Q 002209 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 397 ~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~ 476 (953)
....+..+.|+|++..+++.... +....+.+++. ..............+....|+|+++.++..+..
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~~~----------~~~~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEEEC----------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred cCCceEEEEecCCCCcEEEEEec----------CCCCEEEEEec---ccccccccccceeeeeeeeecccccceEEEEEc
Confidence 11234568899999887765221 23456888885 444444444555566778999999998877643
Q ss_pred ccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 477 KTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 477 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
..+ .|+++|..++ +.......+...+.. ++|||||++|+....
T Consensus 262 ~d~--~i~iwd~~~~--~~~~~l~gH~~~V~~------l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 262 AQN--QLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAAA 304 (318)
T ss_dssp TTC--CEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEET
T ss_pred CCC--EEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEec
Confidence 323 4666677764 344444444444444 889999999987763
No 244
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.55 E-value=2.1e-12 Score=144.03 Aligned_cols=298 Identities=9% Similarity=0.043 Sum_probs=172.9
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|||||++|+..+ ....|.+||+.+++........... +..++|+|||+.|+....
T Consensus 67 ~~V~~~~~sp~~~~l~s~s---------~D~~v~iWd~~~~~~~~~~~~h~~~----v~~~~~s~~g~~las~~~----- 128 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSAS---------QDGRLIVWNALTSQKTHAIKLHCPW----VMECAFAPNGQSVACGGL----- 128 (380)
T ss_dssp SCEEEEEECTTSSCEEEEE---------TTSEEEEEETTTTEEEEEEECCCTT----CCCCEECTTSSEEEECCS-----
T ss_pred cEEEEEEEcCCCCEEEEEe---------CCCeEEEEECCCCccceEEecCCCC----EEEEEECCCCCEEEEeeC-----
Confidence 4689999999999998855 2568888999887654433323222 678999999999986511
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC--------ceeEeCCC-Ccccccc
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG--------TVKEIGPP-AVYTSLD 338 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g--------~~~~l~~~-~~~~~~~ 338 (953)
.+.+.++++ ++ ..+.+... +.+....
T Consensus 129 --------------------------------------------d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 129 --------------------------------------------DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp --------------------------------------------SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred --------------------------------------------CCcEEEEECCCCccccCCccceeeccCCCcceEEEE
Confidence 112223343 21 11223333 6678889
Q ss_pred cCCCCcE-EEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc-CCCCceEE
Q 002209 339 PSPDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYW 416 (953)
Q Consensus 339 ~SpDG~~-l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp-Dg~~i~~~ 416 (953)
|+|++.. |+..+.+ +.|.+||+..+........... .+....+..+.|++ |++.++..
T Consensus 165 ~~~~~~~~l~s~s~D-------------~~i~~wd~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 165 YVPDQETRLITGSGD-------------QTCVLWDVTTGQRISIFGSEFP-------SGHTADVLSLSINSLNANMFISG 224 (380)
T ss_dssp CCSSSSSCEEEECTT-------------SCEEEECTTTCCEEEEECCCSS-------SSCCSCEEEEEECSSSCCEEEEE
T ss_pred EecCCCCEEEEECCC-------------CcEEEEEcCCCcEEEEeecccC-------CCCccCeEEEEeecCCCCEEEEE
Confidence 9998654 5544423 4899999986544332211100 01223345678876 66644443
Q ss_pred EEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcE
Q 002209 417 AETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (953)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 496 (953)
+..+.+.+||+ ...+.....+..+...+..++|+|||+.|+..+.++ .+.++|+.++ ...
T Consensus 225 -------------s~D~~v~~wd~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~----~i~lwd~~~~--~~~ 284 (380)
T 3iz6_a 225 -------------SCDTTVRLWDL-RITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDG----TCRLFDMRTG--HQL 284 (380)
T ss_dssp -------------ETTSCEEEEET-TTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSS----CEEEEETTTT--EEE
T ss_pred -------------ECCCeEEEEEC-CCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCC----eEEEEECCCC--cEE
Confidence 44567899996 112233455666777889999999999988876554 3445566553 222
Q ss_pred EeecCCCcccc-CCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccc
Q 002209 497 ILFDRSSEDVY-SDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKY 575 (953)
Q Consensus 497 ~~~~~~~~~~~-~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~ 575 (953)
........... ..+.--.+.|+|+|++|+....+ ..+++||+.+++.......-..
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---------------------g~i~vwd~~~~~~~~~~~~~~~-- 341 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---------------------GDCYVWDTLLAEMVLNLGTLQN-- 341 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT---------------------SCEEEEETTTCCEEEEECCSCS--
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECC---------------------CCEEEEECCCCceEEEEecccC--
Confidence 22222111000 00001127899999998876532 2499999987765433211000
Q ss_pred eeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002209 576 YETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (953)
Q Consensus 576 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~ 620 (953)
... ..-...+|+|||+.++. .+.. ..+.+|++.+.+
T Consensus 342 --~h~---~~v~~l~~s~dg~~l~s-gs~D---~~i~iW~~~~~~ 377 (380)
T 3iz6_a 342 --SHE---GRISCLGLSSDGSALCT-GSWD---KNLKIWAFSGHR 377 (380)
T ss_dssp --SCC---CCCCEEEECSSSSEEEE-ECTT---SCEEEEECCSSS
T ss_pred --CCC---CceEEEEECCCCCEEEE-eeCC---CCEEEEecCCCc
Confidence 000 00112478999997653 3322 358888876553
No 245
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.55 E-value=8.4e-13 Score=149.58 Aligned_cols=252 Identities=14% Similarity=0.129 Sum_probs=157.5
Q ss_pred ceEEEEccCCCCCCceeeeecCC-CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFP-DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~-~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (953)
.|+|||+.+ ++...+..+. .+..+..++|||||++||... ....|.++|+++++..+........
T Consensus 126 tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs---------~Dg~v~iWd~~~~~~~~~~~~h~~~- 191 (420)
T 4gga_A 126 SVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---------SSAEVQLWDVQQQKRLRNMTSHSAR- 191 (420)
T ss_dssp EEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC-
T ss_pred EEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEE---------CCCeEEEEEcCCCcEEEEEeCCCCc-
Confidence 789999854 3333332222 334789999999999998854 3567888899888765443333221
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-
Q 002209 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (953)
Q Consensus 243 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~- 321 (953)
+.. ++.|++.|+... ....++.++.
T Consensus 192 ---v~~--~s~~~~~l~sgs-------------------------------------------------~d~~i~~~d~~ 217 (420)
T 4gga_A 192 ---VGS--LSWNSYILSSGS-------------------------------------------------RSGHIHHHDVR 217 (420)
T ss_dssp ---EEE--EEEETTEEEEEE-------------------------------------------------TTSEEEEEETT
T ss_pred ---eEE--EeeCCCEEEEEe-------------------------------------------------CCCceeEeeec
Confidence 333 455677777551 1234556665
Q ss_pred CC--ceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE--EeccCCCcccCCccccc
Q 002209 322 DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR--ELCDLPLAEDIPIAFNS 396 (953)
Q Consensus 322 ~g--~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~--~l~~~~~~~~~p~~~~~ 396 (953)
.. ....+... ..+....|+|+|+.++....++ .+.+|+...++.. .+... ..
T Consensus 218 ~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~-------------~v~i~~~~~~~~~~~~~~~~----------~~ 274 (420)
T 4gga_A 218 VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-------------LVNVWPSAPGEGGWVPLQTF----------TQ 274 (420)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------------CEEEEESSCCSSCSCCSEEE----------CC
T ss_pred ccceeeEEecccccceeeeeecCCCCeeeeeeccc-------------cceEEeeccccccceeeeee----------cc
Confidence 32 23333333 6677889999999999887544 8899998744311 11110 01
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEec
Q 002209 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 397 ~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~ 476 (953)
....+..++|+|++..++..... +....|.+||+ ..++..........+..+.|+++++.|+.+...
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~g----------s~D~~I~iwd~---~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEEC----------TTTCEEEEEET---TTTEEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred cCCceeeeeeCCCcccEEEEEee----------cCCCEEEEEeC---CccccceeeccccceeeeeecCCCCeEEEEEec
Confidence 12345678999999887765211 23457899996 444433333444556778999999999887643
Q ss_pred ccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 477 KTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 477 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
..+ .|.++|..++ +.......+...+.. ++|||||++|+....
T Consensus 342 ~d~--~I~iwd~~~~--~~v~~l~gH~~~V~~------l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 342 AQN--QLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAAA 384 (420)
T ss_dssp TTC--CEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEET
T ss_pred CCC--EEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEec
Confidence 333 4666677664 334444444444444 789999999987763
No 246
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.55 E-value=7.5e-13 Score=164.06 Aligned_cols=190 Identities=8% Similarity=0.018 Sum_probs=118.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccc--------cceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceee
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARP--------EEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~ 181 (953)
.+..++|||||++||....++..-+++.... ...+..+.+.+ +......+.++.|.|||+.+ + .....
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~-~--~~~~~ 94 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS-Q--KVLTT 94 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT-C--SEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC-C--cEEEE
Confidence 5678999999999999887644333332221 12244566777 33233344457899999953 2 11222
Q ss_pred eecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeeccc-------CCCccccccccceEEecC
Q 002209 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQ-------SPDIYLNAIFDNFVWVNN 254 (953)
Q Consensus 182 l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~-------~~~~~~~~~~~~~~wspD 254 (953)
+. ....+....|+|||++|+... ....|.++|+++++...... .........+..++|+|+
T Consensus 95 ~~---~~~~V~~v~~sp~g~~l~sgs---------~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 95 VF---VPGKITSIDTDASLDWMLIGL---------QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp EE---CSSCEEEEECCTTCSEEEEEE---------TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred Ec---CCCCEEEEEECCCCCEEEEEc---------CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 32 224688999999999998854 35678889998876531110 000111223778999997
Q ss_pred C-eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC
Q 002209 255 S-TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP 331 (953)
Q Consensus 255 g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~ 331 (953)
+ ..|+... ..+.+ ++|+ +++.. .+...
T Consensus 163 ~~~~l~~g~-------------------------------------------------~dg~v-lWd~~~~~~~~~~~~~ 192 (902)
T 2oaj_A 163 DIGTVLISY-------------------------------------------------EYVTL-TYSLVENEIKQSFIYE 192 (902)
T ss_dssp EEEEEEEEC-------------------------------------------------SSCEE-EEETTTTEEEEEECCC
T ss_pred CCCEEEEEe-------------------------------------------------CCCcE-EEECCCCceEEEEecc
Confidence 5 5555441 22345 6676 55432 22211
Q ss_pred -------------------CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE
Q 002209 332 -------------------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV 378 (953)
Q Consensus 332 -------------------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~ 378 (953)
..+..++|||||++|+..+.+. .|.+||+..++.
T Consensus 193 ~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-------------~i~lWd~~~g~~ 245 (902)
T 2oaj_A 193 LPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-------------SLVFWDANSGHM 245 (902)
T ss_dssp BCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-------------CEEEEETTTCCE
T ss_pred cCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-------------eEEEEECCCCcE
Confidence 3477899999999999887543 899999976543
No 247
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.55 E-value=1e-12 Score=162.62 Aligned_cols=245 Identities=10% Similarity=0.045 Sum_probs=165.4
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+..++|||||++|++.. ....|.++++.+++........... +..++|+|||+.|++..
T Consensus 14 ~~v~~i~~sp~~~~la~~~---------~~g~v~iwd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~------ 74 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTL---------YSGRVEIWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGS------ 74 (814)
T ss_dssp SCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEE------
T ss_pred CceEEEEECCCCCEEEEEe---------CCCEEEEEECCCCceEEEEecCCCc----EEEEEEeCCCCEEEEEe------
Confidence 4688999999999999865 2568889998887654433322222 77999999999999771
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG~~ 345 (953)
..+.|.++++ +|+. ..+... ..+..++|||||++
T Consensus 75 -------------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 111 (814)
T 3mkq_A 75 -------------------------------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (814)
T ss_dssp -------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred -------------------------------------------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCE
Confidence 2246778888 6643 445444 77889999999999
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCc-eE-EEeccCCCcccCCccccccccCccceeecc-CCCCceEEEEeccC
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYWAETQDG 422 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~-~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp-Dg~~i~~~~~~~~~ 422 (953)
|+..+.+ +.|.+|+++++ .. ..+..+. ..+..++|+| ||+.++..
T Consensus 112 l~~~~~d-------------g~i~vw~~~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~~~l~~~------ 159 (814)
T 3mkq_A 112 VLSGSDD-------------LTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPSTFASG------ 159 (814)
T ss_dssp EEEEETT-------------SEEEEEEGGGTSEEEEEEECCS-------------SCEEEEEEETTEEEEEEEE------
T ss_pred EEEEcCC-------------CEEEEEECCCCceEEEEEcCCC-------------CcEEEEEEEcCCCCEEEEE------
Confidence 9987744 38999999854 33 3333222 2346789999 77766665
Q ss_pred CCcccccccCCeEEEEecCCCCCCCceEEeecc-cccCCeeecc--CCceEEEEEecccCceEEEEEcCCCCCCCcEEee
Q 002209 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCD--DSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (953)
Q Consensus 423 ~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~-~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 499 (953)
+..+.|.+|++ ..+.....+.... ..+..+.|+| ||..|+....++ .+.+++..++ +.....
T Consensus 160 -------~~dg~v~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~--~~~~~~ 224 (814)
T 3mkq_A 160 -------CLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQTK--SCVATL 224 (814)
T ss_dssp -------ETTSEEEEEET--TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS----EEEEEETTTT--EEEEEE
T ss_pred -------eCCCeEEEEEC--CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC----EEEEEECCCC--cEEEEE
Confidence 44568999996 2333334443333 6677899999 899888775433 5667777664 333333
Q ss_pred cCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEec
Q 002209 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 500 ~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~ 569 (953)
......+.. +.|+|||+.++....+ ..|++||+.+++......
T Consensus 225 ~~~~~~v~~------~~~~~~~~~l~~~~~d---------------------g~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 225 EGHMSNVSF------AVFHPTLPIIISGSED---------------------GTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp ECCSSCEEE------EEECSSSSEEEEEETT---------------------SCEEEEETTTCSEEEEEC
T ss_pred cCCCCCEEE------EEEcCCCCEEEEEeCC---------------------CeEEEEECCCCcEEEEee
Confidence 333333332 7899999988877632 138899988877655443
No 248
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.55 E-value=5.9e-14 Score=152.37 Aligned_cols=120 Identities=17% Similarity=0.035 Sum_probs=79.6
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCC
Q 002209 641 LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT 720 (953)
Q Consensus 641 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~ 720 (953)
...+...+|..++....-++ + .|.||++||++.... + ......+...||.|++
T Consensus 16 ~~~~~~~~g~~l~~~~~g~~------~--g~~vvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~--- 68 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGNP------N--GKPAVFIHGGPGGGI------------S----PHHRQLFDPERYKVLL--- 68 (317)
T ss_dssp EEEEECSSSCEEEEEEEECT------T--SEEEEEECCTTTCCC------------C----GGGGGGSCTTTEEEEE---
T ss_pred eeEEEcCCCcEEEEEEcCCC------C--CCcEEEECCCCCccc------------c----hhhhhhccccCCeEEE---
Confidence 33466668888876655332 1 355889999642110 0 0111223457999999
Q ss_pred CCCCCCCChhhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 721 TPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 721 ~~~~G~G~~~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+|.+|+|.+.... ......++|+.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++.
T Consensus 69 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 69 FDQRGCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp ECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ECCCCCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 5557888875421 12455666666555443 2458999999999999999999999999999998754
No 249
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.55 E-value=8.1e-14 Score=156.39 Aligned_cols=150 Identities=19% Similarity=0.256 Sum_probs=90.4
Q ss_pred CceEEEEEEcCC--C--cEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcC
Q 002209 637 LQKELIKYQRKD--G--VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG 712 (953)
Q Consensus 637 ~~~~~~~~~~~d--g--~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G 712 (953)
+...++.|.+.+ | ..+.++++.|.+..+ .++.|+||++||+.............. .......+..|+++|
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~--~~~~P~vv~~HG~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~G 117 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGERC--SGPYPLLGWGHPTEALRAQEQAKEIRD----AKGDDPLVTRLASQG 117 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTTC--CSCEEEEEEECCCCCBTTCCHHHHHHH----TTTCSHHHHTTGGGT
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCCC--CCCCcEEEEeCCCcCCCCccccccccc----ccchHHHHHHHHHCC
Confidence 445667776554 4 368999999987533 245999999999643211000000000 001224466788999
Q ss_pred cEEEEcCCCCCCCCCChhhh---hh---hHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHH-hCC---
Q 002209 713 FAILGGPTTPIIGEGDEEAN---DR---FVEQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLA-HAP--- 781 (953)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~---~~---~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~-~~p--- 781 (953)
|+|+.+|+ +|+|.+... .. .....+.|...++..+.+. +..|+++++|+||||||.+++.++. ..+
T Consensus 118 ~~V~~~D~---~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 194 (397)
T 3h2g_A 118 YVVVGSDY---LGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLS 194 (397)
T ss_dssp CEEEEECC---TTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred CEEEEecC---CCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcC
Confidence 99999666 455554211 11 1123445555555555443 4445689999999999999988873 221
Q ss_pred --CcccEEEEcccCCC
Q 002209 782 --HLFCCGIARSGAYN 795 (953)
Q Consensus 782 --~~~~a~v~~~~~~d 795 (953)
-.+.++++.+++++
T Consensus 195 ~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 195 KEFHLVASAPISGPYA 210 (397)
T ss_dssp TTSEEEEEEEESCCSS
T ss_pred cCcceEEEeccccccc
Confidence 15778888777665
No 250
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.54 E-value=4.6e-14 Score=157.28 Aligned_cols=236 Identities=11% Similarity=0.115 Sum_probs=145.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCC-CC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~-~~ 188 (953)
.+..++|||||++||....+ +.|.||++.+ +..+.+..+. +.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d---------------------------------~~i~iw~~~~----~~~~~~~~~~~h~ 55 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT---------------------------------NQVELYEQDG----NGWKHARTFSDHD 55 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS---------------------------------SCBCEEEEET----TEEEECCCBCCCS
T ss_pred cEEEEEECCCCCEEEEecCC---------------------------------CEEEEEEccC----CceEEEEEEecCC
Confidence 68899999999999887654 3678999853 2112222232 22
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc----eeecccCCCccccccccceEEecCCeEEEEEecC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 264 (953)
..+..+.|+|||+.|+.... ...|.++|+.+++ ...+..+.. .+..++|+|||+.|+...
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~---------d~~v~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~-- 119 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQ---------DRNAYVYEKRPDGTWKQTLVLLRLNR-----AATFVRWSPNEDKFAVGS-- 119 (377)
T ss_dssp SCEEEEEECTTTCCEEEEET---------TSSEEEC------CCCCEEECCCCSS-----CEEEEECCTTSSCCEEEE--
T ss_pred ceEEEEEEeCCCCEEEEEeC---------CCeEEEEEcCCCCceeeeeEecccCC-----ceEEEEECCCCCEEEEEe--
Confidence 47899999999999988652 4567777877766 233333222 277899999999888761
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc----eeEeCC-C-Cccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGP-P-AVYTSL 337 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~----~~~l~~-~-~~~~~~ 337 (953)
..+.|.++++ +++ .+.+.. . ..+..+
T Consensus 120 -----------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 120 -----------------------------------------------GARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp -----------------------------------------------SSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred -----------------------------------------------cCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 1234556666 443 455554 3 778899
Q ss_pred ccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEec-cCCCcccCC-----ccccccccCccceeeccCCC
Q 002209 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELC-DLPLAEDIP-----IAFNSVRKGMRSINWRSDKP 411 (953)
Q Consensus 338 ~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~-~~~~~~~~p-----~~~~~~~~~~~~~~wspDg~ 411 (953)
+|+|||++|+..+.+. .|.+||+..+...... ..+.....+ ..+ .....+..++|+|||+
T Consensus 153 ~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 153 DWHPNNVLLAAGCADR-------------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp EECTTSSEEEEEESSS-------------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred EEcCCCCEEEEEeCCC-------------EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC
Confidence 9999999999887443 8999998632211000 000000000 001 2224457899999999
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEecCCCCCCC----ceEEeecccccCCeeeccCCceEEEEE
Q 002209 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYES 474 (953)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~----~~~l~~~~~~~~~~~~SpDg~~l~~~~ 474 (953)
.++.. +..+.|.+|++ .++.. ...+..+...+..+.|+|||+.|+...
T Consensus 219 ~l~~~-------------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 219 ALAYA-------------GHDSSVTIAYP--SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp CEEEE-------------ETTTEEC-CEE--CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred EEEEE-------------eCCCcEEEEEC--CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 87776 44567888986 33333 334555666678899999999887653
No 251
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.54 E-value=1e-13 Score=154.44 Aligned_cols=178 Identities=11% Similarity=0.028 Sum_probs=114.5
Q ss_pred HHHcCcEEEEcCCCCCCCCCChhhh----------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEEeChHH
Q 002209 708 WLARGFAILGGPTTPIIGEGDEEAN----------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIA-VGGHSYGA 770 (953)
Q Consensus 708 la~~G~~V~~~~~~~~~G~G~~~~~----------------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-l~G~S~GG 770 (953)
|+++||.|+++|.+|. +|.+... .......++|+.++++.+ +.+++. |+||||||
T Consensus 94 L~~~g~~vi~~D~~G~--~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~~lvGhS~Gg 165 (377)
T 2b61_A 94 LDTDRYFFISSNVLGG--CKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL------GISHLKAIIGGSFGG 165 (377)
T ss_dssp EETTTCEEEEECCTTC--SSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT------TCCCEEEEEEETHHH
T ss_pred cccCCceEEEecCCCC--CCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc------CCcceeEEEEEChhH
Confidence 5578999999766541 2333211 112455556655555443 345887 99999999
Q ss_pred HHHHHHHHhCCCcccEEEEcccCCCCCCC----------------Cc---Ccccc-------------------cchhh-
Q 002209 771 FMTANLLAHAPHLFCCGIARSGAYNRTLT----------------PF---GFQNE-------------------DRTLW- 811 (953)
Q Consensus 771 ~~a~~~a~~~p~~~~a~v~~~~~~d~~~~----------------~~---~~~~~-------------------~~~~~- 811 (953)
.+++.+|.++|++++++|++++....... .+ .+... ....+
T Consensus 166 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (377)
T 2b61_A 166 MQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLA 245 (377)
T ss_dssp HHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHH
Confidence 99999999999999999999885432100 00 00000 00000
Q ss_pred -----------------hhH------------------------HHHHhcC-------cccccCCCCCcEEEEEeCCCCC
Q 002209 812 -----------------EAT------------------------STYVEMS-------PFMSANKLKKPILLVHGEEDNN 843 (953)
Q Consensus 812 -----------------~~~------------------------~~~~~~s-------p~~~~~~i~~P~Li~~G~~D~~ 843 (953)
... ..+.... ....+.++++|+|+++|++|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~ 325 (377)
T 2b61_A 246 KAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQL 325 (377)
T ss_dssp HHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSS
T ss_pred HHhccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCccc
Confidence 000 0011111 1345678899999999999999
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEEEeC-CCCccCCCcccHHHHHHHHHHHHHH
Q 002209 844 SGTLTMQSDRFFNALKGHGALCRLVILP-FESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 844 v~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+| +++..+..+.+.+.....++++++ ++||... .+....+.+.+.+||++
T Consensus 326 ~~--~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 326 FK--PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF-LVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp SC--HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH-HHCHHHHHHHHHHHHHT
T ss_pred CC--ccchHHHHHHHHhcCCCceEEEeCCCCCchhh-hcCHHHHHHHHHHHHhc
Confidence 98 866556666666665668999999 9999864 45567888888999865
No 252
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.54 E-value=1.2e-12 Score=142.29 Aligned_cols=283 Identities=8% Similarity=0.051 Sum_probs=168.0
Q ss_pred CcccceEeccCC-CeEEEEEeeccccCCCCcceEEEEECCCCc-----e-eecccCCCccccccccceEEecCCeEEEEE
Q 002209 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGK-----A-RPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 189 ~~~~~~~wSPDG-~~laf~~~~~~~~~~~~~~~l~~~d~~~g~-----~-~~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 261 (953)
..+...+|+|++ +.|+..+ . ...|.++++.+.. . +.+..+.. .+..++|+|||+.|+..
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s-------~--D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSAS-------R--DKTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSA 83 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEE-------T--TSEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEE
T ss_pred ceEEEEEccCCCccEEEEec-------C--CccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEE
Confidence 468889999977 5555433 2 3455555544321 1 12222222 26789999999999866
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-Ccccccc
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLD 338 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~ 338 (953)
. ..+.|.++|+ +|+. +.+... ..+..++
T Consensus 84 s-------------------------------------------------~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 84 S-------------------------------------------------WDKTLRLWDVATGETYQRFVGHKSDVMSVD 114 (319)
T ss_dssp E-------------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred e-------------------------------------------------CCCEEEEEECCCCCeeEEEccCCCcEEEEE
Confidence 1 2246777888 7754 344444 7788999
Q ss_pred cCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC------C
Q 002209 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP------S 412 (953)
Q Consensus 339 ~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~------~ 412 (953)
|+|||+.|+..+.+. .|.+||+.+.....+..+. ..+..+.|+|+++ .
T Consensus 115 ~~~~~~~l~s~s~D~-------------~i~vwd~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 115 IDKKASMIISGSRDK-------------TIKVWTIKGQCLATLLGHN-------------DWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp ECTTSCEEEEEETTS-------------CEEEEETTSCEEEEECCCS-------------SCEEEEEECCC------CCE
T ss_pred EcCCCCEEEEEeCCC-------------eEEEEECCCCeEEEEeccC-------------CcEEEEEEccCCCCCCCccE
Confidence 999999998887443 8999999877666554432 2345678888653 2
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEecCCCCCCC-ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
++-. +....+.+|++ ...+ ...+..+...+..++|+|||+.|+..+.++ .+.++|+.++
T Consensus 169 l~s~-------------~~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg----~i~iwd~~~~ 228 (319)
T 3frx_A 169 IISA-------------GNDKMVKAWNL---NQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG----EIMLWNLAAK 228 (319)
T ss_dssp EEEE-------------ETTSCEEEEET---TTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC----EEEEEETTTT
T ss_pred EEEE-------------eCCCEEEEEEC---CcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC
Confidence 2222 34567889996 3322 233455666778899999999998876543 4556666664
Q ss_pred CCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccC
Q 002209 492 DVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (953)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~ 571 (953)
+........ ..+.. +.|+|||.+++..... .+.+|+++++.........
T Consensus 229 --~~~~~~~~~-~~v~~------~~~sp~~~~la~~~~~----------------------~i~v~~~~~~~~~~~~~~~ 277 (319)
T 3frx_A 229 --KAMYTLSAQ-DEVFS------LAFSPNRYWLAAATAT----------------------GIKVFSLDPQYLVDDLRPE 277 (319)
T ss_dssp --EEEEEEECC-SCEEE------EEECSSSSEEEEEETT----------------------EEEEEEETTEEEEEEECCC
T ss_pred --cEEEEecCC-CcEEE------EEEcCCCCEEEEEcCC----------------------CcEEEEeCcCeeeeccCcc
Confidence 222222221 22333 8899999998876521 2777777665543332221
Q ss_pred cccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002209 572 KEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (953)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 618 (953)
...+..... ......+|+|||+.|+..... ..|++|++.+
T Consensus 278 ~~~~~~~~~---~~v~~~~~spdg~~l~sg~~D----g~i~vWd~~t 317 (319)
T 3frx_A 278 FAGYSKAAE---PHAVSLAWSADGQTLFAGYTD----NVIRVWQVMT 317 (319)
T ss_dssp CTTCCGGGC---CCEEEEEECTTSSEEEEEETT----SCEEEEEEEE
T ss_pred ccccccCcC---cceeEEEECCCCCEEEEeecC----ceEEEEEEee
Confidence 110000000 000125799999987754433 2477776544
No 253
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.54 E-value=6.3e-14 Score=149.77 Aligned_cols=174 Identities=11% Similarity=0.105 Sum_probs=116.2
Q ss_pred HHHHHcCcEEEEcCCCCCCCCCChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 002209 706 LLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (953)
Q Consensus 706 ~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 782 (953)
..|++ +|.|++ +|.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|+
T Consensus 58 ~~L~~-~~~vi~---~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~va~~~A~~~p~ 127 (286)
T 2puj_A 58 PFVDA-GYRVIL---KDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL------DIDRAHLVGNAMGGATALNFALEYPD 127 (286)
T ss_dssp HHHHT-TCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHhc-cCEEEE---ECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChH
Confidence 34554 599999 5556888875432 23455666666665543 23689999999999999999999999
Q ss_pred cccEEEEcccCCCCC--CC--Cc-C------c---cc--------------cc---ch----hhh----hHH---HHH--
Q 002209 783 LFCCGIARSGAYNRT--LT--PF-G------F---QN--------------ED---RT----LWE----ATS---TYV-- 818 (953)
Q Consensus 783 ~~~a~v~~~~~~d~~--~~--~~-~------~---~~--------------~~---~~----~~~----~~~---~~~-- 818 (953)
+++++|++++..... .. .. . + .. .. .. .+. .+. .+.
T Consensus 128 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (286)
T 2puj_A 128 RIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLIS 207 (286)
T ss_dssp GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 999999998754211 00 00 0 0 00 00 00 000 000 000
Q ss_pred -------hcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHH
Q 002209 819 -------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETD 891 (953)
Q Consensus 819 -------~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 891 (953)
.......+.++++|+|+++|++|..+| +..++++.+.+. ..++++++++||... .+..+.+.+.+.
T Consensus 208 ~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~ 280 (286)
T 2puj_A 208 AQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKLLWNID----DARLHVFSKCGAWAQ-WEHADEFNRLVI 280 (286)
T ss_dssp HHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHSS----SEEEEEESSCCSCHH-HHTHHHHHHHHH
T ss_pred HhhhhccccchhhHHhhcCCCEEEEEECCCCccC--HHHHHHHHHHCC----CCeEEEeCCCCCCcc-ccCHHHHHHHHH
Confidence 011234567789999999999999998 888888777664 368999999999763 456778888899
Q ss_pred HHHHH
Q 002209 892 RWLQK 896 (953)
Q Consensus 892 ~fl~~ 896 (953)
+||.+
T Consensus 281 ~fl~~ 285 (286)
T 2puj_A 281 DFLRH 285 (286)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99864
No 254
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.54 E-value=7.1e-13 Score=148.69 Aligned_cols=243 Identities=12% Similarity=0.002 Sum_probs=148.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCC----CCceeeeecC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK----LGQEIEIQGF 185 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~----~~~~~~l~~~ 185 (953)
.+..++|+| ++|+..+.+ +.|+||++.. +. ......+..
T Consensus 18 ~i~~~~~~~--~~l~s~~~d---------------------------------g~i~iw~~~~-~~~~~~~~~~~~~~~- 60 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSGD---------------------------------GYLKVWDNKL-LDNENPKDKSYSHFV- 60 (397)
T ss_dssp CEEEEEECS--SEEEEEETT---------------------------------SEEEEEESBC-CTTCCGGGGEEEEEC-
T ss_pred CeEEEEecC--CeEEEEcCC---------------------------------CEEEEEECCC-cccccCCCcceEEec-
Confidence 466788888 677777664 3689999854 21 001334433
Q ss_pred CCCCcccceEeccC----C---CeEEEEEeeccccCCCCcceEEEEECCCCc------eeecccCCCccccccccceEEe
Q 002209 186 PDGAKLNFVTWSQD----G---KHLAFSIRIDAEDSSSSKLRVWVADVDTGK------ARPLFQSPDIYLNAIFDNFVWV 252 (953)
Q Consensus 186 ~~~~~~~~~~wSPD----G---~~laf~~~~~~~~~~~~~~~l~~~d~~~g~------~~~lt~~~~~~~~~~~~~~~ws 252 (953)
....+....|+|| | +.|+.... ...|+++++.+++ ...+...........+..+.|+
T Consensus 61 -h~~~v~~~~~~~~~~~~g~~~~~l~s~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 61 -HKSGLHHVDVLQAIERDAFELCLVATTSF---------SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp -CTTCEEEEEEEEEEETTTEEEEEEEEEET---------TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred -CCCcEEEEEEecccccCCccccEEEEEcC---------CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEe
Confidence 2346899999999 9 88887552 4567777777766 4444433200001127789999
Q ss_pred ----cCCeE-EEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C----
Q 002209 253 ----NNSTL-LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---- 322 (953)
Q Consensus 253 ----pDg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~---- 322 (953)
|||+. |+... ..+.|.++++ +
T Consensus 131 ~~~~~~~~~~l~~~~-------------------------------------------------~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 131 ASNDRLLSHRLVATD-------------------------------------------------VKGTTYIWKFHPFADE 161 (397)
T ss_dssp CCC----CEEEEEEE-------------------------------------------------TTSCEEEEEEESSSSH
T ss_pred eccCCCCceEEEEEe-------------------------------------------------CCCcEEEEeCCccccc
Confidence 99998 77651 1134555555 4
Q ss_pred --Cc-ee-----Ee-------CCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-Eecc--
Q 002209 323 --GT-VK-----EI-------GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCD-- 383 (953)
Q Consensus 323 --g~-~~-----~l-------~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~-- 383 (953)
++ .. .+ ... ..+..++|+||| .|+....+ +.|.+||+..+... .+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~ 227 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-------------GTVQISELSTLRPLYNFESQH 227 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-------------SEEEEEETTTTEEEEEEECCC
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-------------CcEEEEECCCCceeEEEeccc
Confidence 32 22 33 112 667889999999 77666533 38999999865433 3332
Q ss_pred -CCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccC---CeEEEEecCCCCCCCceEEee------
Q 002209 384 -LPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR---DIIYTQQAEPVQGEGPEILHK------ 453 (953)
Q Consensus 384 -~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~---~~l~~~d~~~~~g~~~~~l~~------ 453 (953)
+... ...+..++|+|||+.++.. +.. +.|.+||+ .++.....+..
T Consensus 228 ~h~~~----------~~~i~~i~~~~~~~~l~~~-------------~~d~~~g~i~i~d~--~~~~~~~~~~~~~~~~~ 282 (397)
T 1sq9_A 228 SMINN----------SNSIRSVKFSPQGSLLAIA-------------HDSNSFGCITLYET--EFGERIGSLSVPTHSSQ 282 (397)
T ss_dssp ---CC----------CCCEEEEEECSSTTEEEEE-------------EEETTEEEEEEEET--TTCCEEEEECBC-----
T ss_pred ccccc----------CCccceEEECCCCCEEEEE-------------ecCCCCceEEEEEC--CCCcccceeccCccccc
Confidence 1000 1345689999999877665 223 58999996 23322334444
Q ss_pred -------cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 454 -------LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 454 -------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
+...+..+.|+|||+.|+....++ .|.++++.++
T Consensus 283 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~ 323 (397)
T 1sq9_A 283 ASLGEFAHSSWVMSLSFNDSGETLCSAGWDG----KLRFWDVKTK 323 (397)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTT
T ss_pred ccccccccCCcEEEEEECCCCCEEEEEeCCC----eEEEEEcCCC
Confidence 566677899999999988776443 5667777664
No 255
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.53 E-value=1.7e-13 Score=148.45 Aligned_cols=120 Identities=14% Similarity=-0.009 Sum_probs=80.3
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCC
Q 002209 641 LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT 720 (953)
Q Consensus 641 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~ 720 (953)
...++..+|..++...+-++ + .|.||++||++.... + ......+..+||.|++
T Consensus 13 ~~~~~~~~g~~l~y~~~G~~------~--g~pvvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~--- 65 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGNP------H--GKPVVMLHGGPGGGC------------N----DKMRRFHDPAKYRIVL--- 65 (313)
T ss_dssp EEEEECSSSCEEEEEEEECT------T--SEEEEEECSTTTTCC------------C----GGGGGGSCTTTEEEEE---
T ss_pred cceEEcCCCCEEEEEecCCC------C--CCeEEEECCCCCccc------------c----HHHHHhcCcCcceEEE---
Confidence 34456568888876655332 1 355889999642110 0 0111223357999999
Q ss_pred CCCCCCCChhhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 721 TPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 721 ~~~~G~G~~~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+|.+|+|.|.... ......++|+.+.++.+ ..+++.|+||||||.+++.++.++|++++++|++++.
T Consensus 66 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 66 FDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL------GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp ECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ECCCCCcCCCCCcccccccHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 5557888875431 22456666766665543 2358999999999999999999999999999998754
No 256
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.53 E-value=8.2e-14 Score=153.92 Aligned_cols=179 Identities=15% Similarity=0.091 Sum_probs=116.9
Q ss_pred HHHHHHHcCcEEEEcCCCCCCCCCChhhh---------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHH
Q 002209 704 SVLLWLARGFAILGGPTTPIIGEGDEEAN---------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTA 774 (953)
Q Consensus 704 ~~~~la~~G~~V~~~~~~~~~G~G~~~~~---------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 774 (953)
....|+++||.|+.+|. +|+|.+... .......+.|+.++++++.++ .+.++++++||||||.+++
T Consensus 85 ~~~~l~~~g~~v~~~d~---~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~ 159 (354)
T 2rau_A 85 IVLYLARNGFNVYTIDY---RTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAAL 159 (354)
T ss_dssp HHHHHHHTTEEEEEEEC---GGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHH
T ss_pred HHHHHHhCCCEEEEecC---CCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHH
Confidence 46678889999999555 566665432 112467788999999998775 2346899999999999999
Q ss_pred HHHHhC-CCcccEEEEcccCCCC--CCCCc-----------------------Ccc----------------c---ccch
Q 002209 775 NLLAHA-PHLFCCGIARSGAYNR--TLTPF-----------------------GFQ----------------N---EDRT 809 (953)
Q Consensus 775 ~~a~~~-p~~~~a~v~~~~~~d~--~~~~~-----------------------~~~----------------~---~~~~ 809 (953)
.++.++ |++++++|++++.... ....+ .+. . ....
T Consensus 160 ~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (354)
T 2rau_A 160 NYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSIS 239 (354)
T ss_dssp HHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHH
T ss_pred HHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHH
Confidence 999998 9999999998653211 00000 000 0 0000
Q ss_pred hhhhHHHH----------------------------------HhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHH
Q 002209 810 LWEATSTY----------------------------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (953)
Q Consensus 810 ~~~~~~~~----------------------------------~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~ 855 (953)
.|-....+ ...+....+.++++|+||+||++|.++| ..+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p---~~~~~l- 315 (354)
T 2rau_A 240 DFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQI---FDSKIL- 315 (354)
T ss_dssp HHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHH---BCGGGS-
T ss_pred HHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCc---cchhhh-
Confidence 00000000 1112234456889999999999998754 233222
Q ss_pred HHHHhCCCcEEEEEeCCCCccCC--CcccHHHHHHHHHHHHHHh
Q 002209 856 NALKGHGALCRLVILPFESHGYA--ARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 856 ~~l~~~g~~~~~~~~~~~~H~~~--~~~~~~~~~~~i~~fl~~~ 897 (953)
....++++++++||... ..+....+.+.+.+||+++
T Consensus 316 ------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 316 ------PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp ------CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred ------ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 13469999999999753 2344678889999999874
No 257
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.53 E-value=5.3e-14 Score=140.37 Aligned_cols=183 Identities=13% Similarity=-0.050 Sum_probs=114.3
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~ 749 (953)
.|+||++||..... . ..+.......|+++||.|+.++++. .+ .+ .....++|+.+.++.
T Consensus 4 ~p~vv~~HG~~~~~-----------~--~~~~~~~~~~l~~~g~~v~~~d~~~---~~---~~--~~~~~~~~~~~~~~~ 62 (192)
T 1uxo_A 4 TKQVYIIHGYRASS-----------T--NHWFPWLKKRLLADGVQADILNMPN---PL---QP--RLEDWLDTLSLYQHT 62 (192)
T ss_dssp CCEEEEECCTTCCT-----------T--STTHHHHHHHHHHTTCEEEEECCSC---TT---SC--CHHHHHHHHHTTGGG
T ss_pred CCEEEEEcCCCCCc-----------c--hhHHHHHHHHHHhCCcEEEEecCCC---CC---CC--CHHHHHHHHHHHHHh
Confidence 58899999963211 1 0112222235778999999977751 11 11 123334444433332
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC--cccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccC
Q 002209 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH--LFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSAN 827 (953)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 827 (953)
. .+++.++||||||.+++.++.++|+ +++++|+++|+...... +.. .......+ .....+.
T Consensus 63 ------~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~---~~~-~~~~~~~~------~~~~~~~ 125 (192)
T 1uxo_A 63 ------L-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT---LQM-LDEFTQGS------FDHQKII 125 (192)
T ss_dssp ------C-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT---CGG-GGGGTCSC------CCHHHHH
T ss_pred ------c-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc---chh-hhhhhhcC------CCHHHHH
Confidence 2 4689999999999999999999998 99999999986542110 000 00000000 0012233
Q ss_pred CCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 828 KLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 828 ~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
++++|+|+++|++|..+| ++.+.++.+.+ . .++++++++||.+... .. ..+..+.+||.+++.
T Consensus 126 ~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~-~~-~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 126 ESAKHRAVIASKDDQIVP--FSFSKDLAQQI-D----AALYEVQHGGHFLEDE-GF-TSLPIVYDVLTSYFS 188 (192)
T ss_dssp HHEEEEEEEEETTCSSSC--HHHHHHHHHHT-T----CEEEEETTCTTSCGGG-TC-SCCHHHHHHHHHHHH
T ss_pred hhcCCEEEEecCCCCcCC--HHHHHHHHHhc-C----ceEEEeCCCcCccccc-cc-ccHHHHHHHHHHHHH
Confidence 456799999999999998 89888888877 2 4889999999987422 11 112335666666664
No 258
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.53 E-value=2.7e-13 Score=144.51 Aligned_cols=171 Identities=14% Similarity=0.168 Sum_probs=115.8
Q ss_pred HcCcEEEEcCCCCCCCCCChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccE
Q 002209 710 ARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (953)
++||.|++ +|.+|+|.+.... .......+|+.+.++.+ ..+++.|+||||||.+++.+|.++|+++++
T Consensus 52 ~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~ 122 (282)
T 1iup_A 52 SKFYRVIA---PDMVGFGFTDRPENYNYSKDSWVDHIIGIMDAL------EIEKAHIVGNAFGGGLAIATALRYSERVDR 122 (282)
T ss_dssp TTTSEEEE---ECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHSGGGEEE
T ss_pred ccCCEEEE---ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHChHHHHH
Confidence 67999999 5556888775432 23556677777666654 235899999999999999999999999999
Q ss_pred EEEcccCCCCCCC-C-----cCcc---------------cc---cchh----hh---h---HHHHHhc------------
Q 002209 787 GIARSGAYNRTLT-P-----FGFQ---------------NE---DRTL----WE---A---TSTYVEM------------ 820 (953)
Q Consensus 787 ~v~~~~~~d~~~~-~-----~~~~---------------~~---~~~~----~~---~---~~~~~~~------------ 820 (953)
+|++++....... . +.+. .. .... +. . ...+...
T Consensus 123 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (282)
T 1iup_A 123 MVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDAL 202 (282)
T ss_dssp EEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHH
T ss_pred HHeeCCccCCCCCCHHHHHHhcCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhcccccccccc
Confidence 9999875421100 0 0000 00 0000 00 0 0001100
Q ss_pred -CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 821 -SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 821 -sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
.+...+.++++|+|+++|++|..+| ++.+.++.+.+. ..++++++++||... .+..+.+.+.+.+||++
T Consensus 203 ~~~~~~l~~i~~P~lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 203 ASSDEDIKTLPNETLIIHGREDQVVP--LSSSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp CCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHT
T ss_pred ccchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHhCC----CCeEEEECCCCCCcc-ccCHHHHHHHHHHHHhc
Confidence 0113567889999999999999998 888887776654 368999999999763 56677888889999875
No 259
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.52 E-value=5e-13 Score=150.91 Aligned_cols=297 Identities=8% Similarity=0.119 Sum_probs=172.9
Q ss_pred cccceEeccCCCeEEEEEeecc--ccCCCCcceEEEEECCCCcee---ecccCCCccccccccceEEecCCeEEEEEecC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDA--EDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~--~~~~~~~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~ 264 (953)
.+...+|||||+.++++..... .........|+++++.+++.. ...... ..+..++|+|||+.|+...
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~-- 86 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVD-----SKFNDLDWSHNNKIIAGAL-- 86 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCS-----SCEEEEEECSSSSCEEEEE--
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecC-----CceEEEEECCCCCeEEEEc--
Confidence 4677899999996665542110 000034567888888876532 222222 2277999999999988761
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C---C--ceeEeCCC-Cccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---G--TVKEIGPP-AVYTSL 337 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~---g--~~~~l~~~-~~~~~~ 337 (953)
..+.|.++++ + + ....+... ..+..+
T Consensus 87 -----------------------------------------------~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 119 (416)
T 2pm9_A 87 -----------------------------------------------DNGSLELYSTNEANNAINSMARFSNHSSSVKTV 119 (416)
T ss_dssp -----------------------------------------------SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEE
T ss_pred -----------------------------------------------cCCeEEEeecccccccccchhhccCCccceEEE
Confidence 1234556666 4 2 33444444 778899
Q ss_pred ccCCC-CcEEEEEEecCCccccccCCCCCcceEEEeccCce-------EEEeccCCCcccCCccccccccCccceeeccC
Q 002209 338 DPSPD-EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-------VRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (953)
Q Consensus 338 ~~SpD-G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-------~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspD 409 (953)
+|+|| ++.|+..+.+ +.|.+||+.++. ...+.. .......+..++|+||
T Consensus 120 ~~~~~~~~~l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~----------~~~~~~~v~~~~~~~~ 176 (416)
T 2pm9_A 120 KFNAKQDNVLASGGNN-------------GEIFIWDMNKCTESPSNYTPLTPGQ----------SMSSVDEVISLAWNQS 176 (416)
T ss_dssp EECSSSTTBEEEECSS-------------SCEEBCBTTTTSSCTTTCCCBCCCC----------SCCSSCCCCEEEECSS
T ss_pred EEcCCCCCEEEEEcCC-------------CeEEEEECCCCcccccccccccccc----------ccCCCCCeeEEEeCCC
Confidence 99999 7777766533 389999998554 111110 0122244578999999
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEeec------ccccCCeeeccCCceEEEEEecccCceE
Q 002209 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKL------DLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~------~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
+..+++.. +..+.|.+||+ ..++. ..+... ...+..+.|+|+|..+++....++....
T Consensus 177 ~~~~l~~~------------~~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 177 LAHVFASA------------GSSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CTTEEEEE------------SSSSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCcEEEEE------------cCCCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 65544441 34567899996 33333 223222 4556789999998654444433321113
Q ss_pred EEEEcCCCCCCCcEEeec-CCCccccCCCCCCCeEecc-CCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECC
Q 002209 483 TWVISPGSKDVAPRILFD-RSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN 560 (953)
Q Consensus 483 l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~Sp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~ 560 (953)
|.++|+.++. .+..... .....+.. +.|+| ||++|+....+ ..|++||+.
T Consensus 242 i~~~d~~~~~-~~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~~d---------------------g~v~~wd~~ 293 (416)
T 2pm9_A 242 ILIWDLRNAN-TPLQTLNQGHQKGILS------LDWCHQDEHLLLSSGRD---------------------NTVLLWNPE 293 (416)
T ss_dssp CCEEETTSTT-SCSBCCCSCCSSCEEE------EEECSSCSSCEEEEESS---------------------SEEEEECSS
T ss_pred EEEEeCCCCC-CCcEEeecCccCceeE------EEeCCCCCCeEEEEeCC---------------------CCEEEeeCC
Confidence 5555665531 2222222 22222333 78999 88888877632 249999998
Q ss_pred CCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002209 561 TGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (953)
Q Consensus 561 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~ 620 (953)
+++.......... .-...+|+|++..++++.+. -..+.++++.+++
T Consensus 294 ~~~~~~~~~~~~~-----------~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 294 SAEQLSQFPARGN-----------WCFKTKFAPEAPDLFACASF---DNKIEVQTLQNLT 339 (416)
T ss_dssp SCCEEEEEECSSS-----------CCCCEEECTTCTTEEEECCS---SSEEEEEESCCCC
T ss_pred CCccceeecCCCC-----------ceEEEEECCCCCCEEEEEec---CCcEEEEEccCCC
Confidence 8876554433221 01235789998444444433 2468888887664
No 260
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.52 E-value=1e-13 Score=153.26 Aligned_cols=119 Identities=14% Similarity=0.132 Sum_probs=84.7
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (953)
..+|.++++..+-|++ ...|+||++||.+... ..|. .....|+++||.|+.+|. .|
T Consensus 9 ~~~g~~l~y~~~G~~~------~~~~~vv~~hG~~~~~-----------~~~~----~~~~~l~~~g~~vi~~d~---~g 64 (356)
T 2e3j_A 9 NCRGTRIHAVADSPPD------QQGPLVVLLHGFPESW-----------YSWR----HQIPALAGAGYRVVAIDQ---RG 64 (356)
T ss_dssp EETTEEEEEEEECCTT------CCSCEEEEECCTTCCG-----------GGGT----TTHHHHHHTTCEEEEECC---TT
T ss_pred ccCCeEEEEEEecCCC------CCCCEEEEECCCCCcH-----------HHHH----HHHHHHHHcCCEEEEEcC---CC
Confidence 3578889888876642 1257899999964211 1121 235567888999999555 56
Q ss_pred CCChhhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCC
Q 002209 726 EGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (953)
Q Consensus 726 ~G~~~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (953)
+|.+.... ........|+.++++.+ +.+++.|+||||||.+++.++.++|++++++|++++..
T Consensus 65 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 65 YGRSSKYRVQKAYRIKELVGDVVGVLDSY------GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp STTSCCCCSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHc------CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 77664321 23456667777766654 34689999999999999999999999999999988654
No 261
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.52 E-value=3.9e-12 Score=139.11 Aligned_cols=283 Identities=12% Similarity=0.067 Sum_probs=169.3
Q ss_pred CCCCceecCC-CCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCC--ceeeeecCC
Q 002209 110 PLPALSFSPQ-RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLG--QEIEIQGFP 186 (953)
Q Consensus 110 ~~~~~~~SPD-G~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~--~~~~l~~~~ 186 (953)
.+..++|||| |++||..+.+ +.|.|||+....... ..+.+.+
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D---------------------------------~~i~vWd~~~~~~~~~~~~~~l~~-- 84 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRD---------------------------------KTIIMWKLTRDETNYGIPQRALRG-- 84 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETT---------------------------------SCEEEEEECCSSSCSEEEEEEECC--
T ss_pred CEEEEEEeCCCCCEEEEEcCC---------------------------------CeEEEEECCCCCcccceeeEEEeC--
Confidence 5778999998 5778777765 367999985422111 1122322
Q ss_pred CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCC
Q 002209 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (953)
Q Consensus 187 ~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 266 (953)
....+....|+|||+.|+... ....|++++...+............ .....++++++.|+...
T Consensus 85 h~~~V~~~~~s~dg~~l~s~~---------~d~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~s~s---- 147 (340)
T 4aow_A 85 HSHFVSDVVISSDGQFALSGS---------WDGTLRLWDLTTGTTTRRFVGHTKD----VLSVAFSSDNRQIVSGS---- 147 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEE----
T ss_pred CCCCEEEEEECCCCCEEEEEc---------ccccceEEeecccceeeeecCCCCc----eeEEEEeecCccceeec----
Confidence 224788999999999998754 2557888888876654443333221 45677889998887651
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeC--CC-CcccccccCCC
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG--PP-AVYTSLDPSPD 342 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~--~~-~~~~~~~~SpD 342 (953)
..+.+.++++ ......+. .. ..+...+|+++
T Consensus 148 ---------------------------------------------~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 148 ---------------------------------------------RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp ---------------------------------------------TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred ---------------------------------------------CCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 1134455566 33222222 12 55677788888
Q ss_pred CcEEEEEEecCCccccccCCCCCcceEEEeccCceEEE-eccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002209 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 343 G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~ 421 (953)
+...++.+.. ..+.|.+||+..+.... +..+. ..+..++|+|||+.++..
T Consensus 183 ~~~~~~~s~~-----------~d~~i~i~d~~~~~~~~~~~~h~-------------~~v~~~~~s~~~~~l~s~----- 233 (340)
T 4aow_A 183 SSNPIIVSCG-----------WDKLVKVWNLANCKLKTNHIGHT-------------GYLNTVTVSPDGSLCASG----- 233 (340)
T ss_dssp SSSCEEEEEE-----------TTSCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTSSEEEEE-----
T ss_pred CCCcEEEEEc-----------CCCEEEEEECCCCceeeEecCCC-------------CcEEEEEECCCCCEEEEE-----
Confidence 7654433311 12379999998665433 32221 335679999999876654
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeec-
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD- 500 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~- 500 (953)
+..+.+.+||+ ...+..........+..+.|+|++..++.. .++ .+.++|+.++ .......
T Consensus 234 --------s~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~d~----~i~iwd~~~~--~~~~~~~~ 295 (340)
T 4aow_A 234 --------GKDGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAA-TGP----SIKIWDLEGK--IIVDELKQ 295 (340)
T ss_dssp --------ETTCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEE-ETT----EEEEEETTTT--EEEEEECC
T ss_pred --------eCCCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeecc-CCC----EEEEEECCCC--eEEEeccc
Confidence 44568899996 333332333344456778999998765544 322 4555666653 1111111
Q ss_pred --------CCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCc
Q 002209 501 --------RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (953)
Q Consensus 501 --------~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~ 563 (953)
.....+.. ++|+|||++|+....+. .|++||+.+|.
T Consensus 296 ~~~~~~~~~h~~~v~~------l~~s~dg~~l~sgs~Dg---------------------~v~iW~~~tGt 339 (340)
T 4aow_A 296 EVISTSSKAEPPQCTS------LAWSADGQTLFAGYTDN---------------------LVRVWQVTIGT 339 (340)
T ss_dssp C-------CCCCCEEE------EEECTTSSEEEEEETTS---------------------CEEEEEEEC--
T ss_pred cceeeeccCCCCCEEE------EEECCCCCEEEEEeCCC---------------------EEEEEeCCCcC
Confidence 11111222 78999999988765322 39999998875
No 262
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=3.5e-12 Score=141.20 Aligned_cols=263 Identities=10% Similarity=0.020 Sum_probs=148.8
Q ss_pred cCCCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCC
Q 002209 107 DAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP 186 (953)
Q Consensus 107 ~~~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~ 186 (953)
....+..++|||||++|++...+ .... +.|.+|++..++ +..+.+....
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~-----------------------~~~~------~~v~~~~~~~~~--g~~~~~~~~~ 96 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEF-----------------------SKDQ------AAVSAFAFDKEK--GTLHLLNTQK 96 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECC-----------------------SSTT------CEEEEEEEETTT--TEEEEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEcc-----------------------CCCC------CcEEEEEEeCCC--CcEEEeeEec
Confidence 34456788999999999888763 1111 256777774431 3333443222
Q ss_pred -CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCC-Cceeeccc---CCCcc------ccccccceEEecCC
Q 002209 187 -DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKARPLFQ---SPDIY------LNAIFDNFVWVNNS 255 (953)
Q Consensus 187 -~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~-g~~~~lt~---~~~~~------~~~~~~~~~wspDg 255 (953)
.+......++ ||++|++... ....|.+++++. +....+.. ..... .......++|+|||
T Consensus 97 ~~~~~p~~~~~--dg~~l~~~~~--------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 97 TMGADPCYLTT--NGKNIVTANY--------SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp CSSSCEEEEEE--CSSEEEEEET--------TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred cCCCCcEEEEE--CCCEEEEEEC--------CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 2223444455 8998877542 245677777753 33322211 11000 00012458999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc---CC----c-e--
Q 002209 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL---DG----T-V-- 325 (953)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~---~g----~-~-- 325 (953)
++|+++.. +...++++++ ++ + .
T Consensus 167 ~~l~~~~~------------------------------------------------~~~~v~v~~~~~~~~~~~~~~l~~ 198 (361)
T 3scy_A 167 KYLLADDL------------------------------------------------GTDQIHKFNINPNANADNKEKFLT 198 (361)
T ss_dssp SEEEEEET------------------------------------------------TTTEEEEEEECTTCCTTTCCCCEE
T ss_pred CEEEEEeC------------------------------------------------CCCEEEEEEEcCCCCcccccceee
Confidence 98887610 1234555554 33 2 1
Q ss_pred -----e-EeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCcccccccc
Q 002209 326 -----K-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRK 399 (953)
Q Consensus 326 -----~-~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~ 399 (953)
. .+........++|||||++|++.... .+.|.+|+++++..+.+....... ....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------------~~~v~v~~~~~g~~~~~~~~~~~~-------~~~~ 259 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI------------GGTVIAFRYADGMLDEIQTVAADT-------VNAQ 259 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TCEEEEEEEETTEEEEEEEEESCS-------SCCC
T ss_pred cccccceecCCCCCCeEEEEcCCCCEEEEEcCC------------CCeEEEEEecCCceEEeEEEecCC-------CCCC
Confidence 1 12222556789999999998877622 247999999876655444322110 0012
Q ss_pred CccceeeccCCCCceEEEEeccCCCccccccc-CCeEEEEecCCCCCCCceEEeec--ccccCCeeeccCCceEEEEEec
Q 002209 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTP-RDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 400 ~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~-~~~l~~~d~~~~~g~~~~~l~~~--~~~~~~~~~SpDg~~l~~~~~~ 476 (953)
++..++|||||+.|+.. . .. .+.+.+|++++ .+++.+.+... ......++|||||++|+++...
T Consensus 260 ~~~~i~~spdg~~l~v~-~-----------~~~~~~i~v~~~~~-~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYAS-N-----------RLKADGVAIFKVDE-TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp CEEEEEECTTSSEEEEE-E-----------CSSSCEEEEEEECT-TTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred CcccEEECCCCCEEEEE-C-----------CCCCCEEEEEEEcC-CCCcEEEeeEecCCCCCceEEECCCCCEEEEEECC
Confidence 33579999999976554 1 11 34677776522 23444443221 3345678999999998887643
Q ss_pred ccCceEEEEEcCCCC
Q 002209 477 KTRRTRTWVISPGSK 491 (953)
Q Consensus 477 ~~~~~~l~~~d~~~~ 491 (953)
. ....+|.+|..++
T Consensus 327 ~-~~v~v~~~d~~~g 340 (361)
T 3scy_A 327 T-NVIQIFERDQATG 340 (361)
T ss_dssp T-TEEEEEEECTTTC
T ss_pred C-CCEEEEEEECCCC
Confidence 3 3357888888775
No 263
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.52 E-value=3.6e-12 Score=140.05 Aligned_cols=301 Identities=12% Similarity=0.042 Sum_probs=167.8
Q ss_pred CcccceEe-----cc-CCCeEEEEEeeccccCCCCcceEEEEECCCCc-------e-eecccCCCccccccccceEEecC
Q 002209 189 AKLNFVTW-----SQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------A-RPLFQSPDIYLNAIFDNFVWVNN 254 (953)
Q Consensus 189 ~~~~~~~w-----SP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~-------~-~~lt~~~~~~~~~~~~~~~wspD 254 (953)
..+....| +| ||+.|+..+ . ...|.++++..++ . ..+..+.. .+..++|+||
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs-------~--D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~~~~ 87 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGS-------R--DKTVMIWKLYEEEQNGYFGIPHKALTGHNH-----FVSDLALSQE 87 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEE-------T--TSCEEEEEECSSCCSSBSEEEEEEECCCSS-----CEEEEEECSS
T ss_pred hhhhheeeEEEeecCCCCCEEEEEc-------C--CCEEEEEECCcCCcccccccccchhccCCC-----ceEEEEECCC
Confidence 35788888 77 998888754 2 3455555655432 1 12222222 2778999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-
Q 002209 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP- 331 (953)
Q Consensus 255 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~- 331 (953)
++.|+... ..+.|.++|+ +|+. ..+...
T Consensus 88 ~~~l~s~s-------------------------------------------------~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 88 NCFAISSS-------------------------------------------------WDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp TTEEEEEE-------------------------------------------------TTSEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEc-------------------------------------------------CCCcEEEEECCCCcEEEEEcCCC
Confidence 99888651 2245677788 6643 344444
Q ss_pred CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC
Q 002209 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (953)
Q Consensus 332 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~ 411 (953)
..+..++|||||++|+..+.+. .|.+||+.+.....+.... .....+..++|+|+++
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~-------------~i~~wd~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAER-------------EIKLWNILGECKFSSAEKE----------NHSDWVSCVRYSPIMK 175 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTS-------------CEEEEESSSCEEEECCTTT----------SCSSCEEEEEECCCCC
T ss_pred CcEEEEEECCCCCEEEEEcCCC-------------EEEEEeccCCceeeeeccc----------CCCceeeeeeeccccc
Confidence 7788999999999998877443 8999999865443332211 1112346788999884
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
..... ...+......+..+.|.+|+. .+.....+..+...+..++|+|||++|+..+.++ .+.++|+...
T Consensus 176 ~~~~~---~~~~~~l~s~~~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg----~v~iwd~~~~ 245 (343)
T 2xzm_R 176 SANKV---QPFAPYFASVGWDGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDK----KLLIWDILNL 245 (343)
T ss_dssp SCSCC---CSSCCEEEEEETTSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTC----EEEEEESSCC
T ss_pred ccccc---CCCCCEEEEEcCCCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEcCCC----eEEEEECCCC
Confidence 21000 000000001134567888984 3333334455666778899999999998876544 4555555322
Q ss_pred CCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccC
Q 002209 492 DVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (953)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~ 571 (953)
......+ ... ..+.. ++|+|++++++.... ..+.+||+.+++...+....
T Consensus 246 ~~~~~~~-~~~-~~v~~------v~~sp~~~~la~~~d----------------------~~v~iw~~~~~~~~~~~~~~ 295 (343)
T 2xzm_R 246 TYPQREF-DAG-STINQ------IAFNPKLQWVAVGTD----------------------QGVKIFNLMTQSKAPVCTIE 295 (343)
T ss_dssp SSCSEEE-ECS-SCEEE------EEECSSSCEEEEEES----------------------SCEEEEESSSCCSCSEEECC
T ss_pred cccceee-cCC-CcEEE------EEECCCCCEEEEECC----------------------CCEEEEEeCCCCCCceEEee
Confidence 1122222 111 11222 789999988765431 12888888776544321111
Q ss_pred cccc--eeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002209 572 KEKY--YETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (953)
Q Consensus 572 ~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g 619 (953)
.... ..........-...+|+|+|+.++..... ..+.+++..++
T Consensus 296 ~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D----g~v~~w~~~~g 341 (343)
T 2xzm_R 296 AEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD----GVIRTFSFETS 341 (343)
T ss_dssp CCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT----SEEEEEEEEEE
T ss_pred cCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC----ceEEEEEEEcc
Confidence 0000 00000000000125789999877644332 35777765443
No 264
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.52 E-value=5.9e-14 Score=150.48 Aligned_cols=210 Identities=14% Similarity=0.073 Sum_probs=131.8
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|..+....+-+++ .|+||++||.+... ..|. .....| ++||.|+.+ +.+|+
T Consensus 17 ~~g~~l~~~~~g~~~--------~~~vl~lHG~~~~~-----------~~~~----~~~~~l-~~~~~v~~~---d~~G~ 69 (299)
T 3g9x_A 17 VLGERMHYVDVGPRD--------GTPVLFLHGNPTSS-----------YLWR----NIIPHV-APSHRCIAP---DLIGM 69 (299)
T ss_dssp ETTEEEEEEEESCSS--------SCCEEEECCTTCCG-----------GGGT----TTHHHH-TTTSCEEEE---CCTTS
T ss_pred eCCeEEEEEecCCCC--------CCEEEEECCCCccH-----------HHHH----HHHHHH-ccCCEEEee---CCCCC
Confidence 378888877764321 46799999964221 1121 123344 569999994 44677
Q ss_pred CChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-cC-
Q 002209 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FG- 802 (953)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~-~~- 802 (953)
|.+.... .......+|+.++++.+ +.+++.|+|||+||.+++.++.++|++++++|++++........ +.
T Consensus 70 G~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 143 (299)
T 3g9x_A 70 GKSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPE 143 (299)
T ss_dssp TTSCCCCCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCG
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHh------CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcch
Confidence 7764432 23556667776666654 34589999999999999999999999999999988543321000 00
Q ss_pred -c-------ccc-----------------------cchhhhhHH-----------------HHHhc--------------
Q 002209 803 -F-------QNE-----------------------DRTLWEATS-----------------TYVEM-------------- 820 (953)
Q Consensus 803 -~-------~~~-----------------------~~~~~~~~~-----------------~~~~~-------------- 820 (953)
. ... .....+... .+...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (299)
T 3g9x_A 144 FARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVE 223 (299)
T ss_dssp GGHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred HHHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhh
Confidence 0 000 000000000 00000
Q ss_pred CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 821 SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 821 sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+....+.++++|+|+++|++|..+| ++.+.++.+.+. .+++++++++||... .+..+.+.+.+.+++.+
T Consensus 224 ~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 224 AYMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPA 292 (299)
T ss_dssp HHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHSGG
T ss_pred hhhhhcccCCCCeEEEecCCCCCCC--HHHHHHHHhhCC----CCeEEEeCCCCCcch-hcCHHHHHHHHHHHHhh
Confidence 0111245678999999999999998 888888877663 368999999999863 45555666666655444
No 265
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.52 E-value=2e-13 Score=149.03 Aligned_cols=117 Identities=16% Similarity=0.187 Sum_probs=83.2
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCC
Q 002209 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (953)
Q Consensus 645 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~ 724 (953)
...+|..++...+- + .|.||++||.+.. ...| ......|+++||.|++ .|.+
T Consensus 16 ~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~--------------~~~w-~~~~~~L~~~g~~via---~Dl~ 67 (328)
T 2cjp_A 16 VAVNGLNMHLAELG--------E--GPTILFIHGFPEL--------------WYSW-RHQMVYLAERGYRAVA---PDLR 67 (328)
T ss_dssp EEETTEEEEEEEEC--------S--SSEEEEECCTTCC--------------GGGG-HHHHHHHHTTTCEEEE---ECCT
T ss_pred ecCCCcEEEEEEcC--------C--CCEEEEECCCCCc--------------hHHH-HHHHHHHHHCCcEEEE---ECCC
Confidence 33578888766541 1 3689999996421 1111 1234566778999999 5556
Q ss_pred CCCChhhh------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 725 GEGDEEAN------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 725 G~G~~~~~------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
|+|.+... .......++|+.+.++.+.. +.+++.|+||||||.+++.+|.++|++++++|++++.
T Consensus 68 G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp TSTTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCCCcCcCCcccccHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 88877543 12356778888888877631 2468999999999999999999999999999998754
No 266
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.52 E-value=2.6e-13 Score=145.40 Aligned_cols=215 Identities=13% Similarity=0.140 Sum_probs=134.1
Q ss_pred EEcCCC-cEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCC
Q 002209 644 YQRKDG-VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (953)
Q Consensus 644 ~~~~dg-~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~ 722 (953)
+...+| ..++....- .++.|.||++||..... .....|. .....|++ .|.|++ .|
T Consensus 17 ~~~~~g~~~l~y~~~G--------~g~~~~vvllHG~~pg~-----------~~~~~w~-~~~~~L~~-~~~via---~D 72 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAG--------VGNDQTVVLLHGGGPGA-----------ASWTNFS-RNIAVLAR-HFHVLA---VD 72 (291)
T ss_dssp EEESSSEEEEEEEEEC--------TTCSSEEEEECCCCTTC-----------CHHHHTT-TTHHHHTT-TSEEEE---EC
T ss_pred EEEeCCcEEEEEEecC--------CCCCCcEEEECCCCCcc-----------chHHHHH-HHHHHHHh-cCEEEE---EC
Confidence 334588 888766542 12246899999952000 0011111 12334554 499999 55
Q ss_pred CCCCCChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCC--
Q 002209 723 IIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT-- 797 (953)
Q Consensus 723 ~~G~G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~-- 797 (953)
.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|++++.....
T Consensus 73 l~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~ 146 (291)
T 2wue_A 73 QPGYGHSDKRAEHGQFNRYAAMALKGLFDQL------GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINL 146 (291)
T ss_dssp CTTSTTSCCCSCCSSHHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCS
T ss_pred CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHh------CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccc
Confidence 56888875432 23456677777666654 23589999999999999999999999999999998754211
Q ss_pred CCC--c-C------c---c--------------ccc---ch----hhh---hHHH---H-H---h-cC-----cc--ccc
Q 002209 798 LTP--F-G------F---Q--------------NED---RT----LWE---ATST---Y-V---E-MS-----PF--MSA 826 (953)
Q Consensus 798 ~~~--~-~------~---~--------------~~~---~~----~~~---~~~~---~-~---~-~s-----p~--~~~ 826 (953)
... . . + . ... .. .+. .+.. + . . .. .. ..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 226 (291)
T 2wue_A 147 FAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREV 226 (291)
T ss_dssp SSCSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTG
T ss_pred cccccchhhHHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHH
Confidence 000 0 0 0 0 000 00 000 0000 0 0 0 00 11 456
Q ss_pred CCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 827 ~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
.++++|+|+++|++|..+| +..++++.+.+. ..++++++++||... .+..+.+.+.+.+||.
T Consensus 227 ~~i~~P~lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 227 YRLRQPVLLIWGREDRVNP--LDGALVALKTIP----RAQLHVFGQCGHWVQ-VEKFDEFNKLTIEFLG 288 (291)
T ss_dssp GGCCSCEEEEEETTCSSSC--GGGGHHHHHHST----TEEEEEESSCCSCHH-HHTHHHHHHHHHHHTT
T ss_pred hhCCCCeEEEecCCCCCCC--HHHHHHHHHHCC----CCeEEEeCCCCCChh-hhCHHHHHHHHHHHHh
Confidence 7789999999999999998 888887766654 368999999999763 4556777788888874
No 267
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.51 E-value=1.8e-12 Score=154.47 Aligned_cols=244 Identities=11% Similarity=0.040 Sum_probs=154.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCC-CceeeeecCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-GQEIEIQGFPDG 188 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~-~~~~~l~~~~~~ 188 (953)
.+..++|||||++||+.... .|.||++.+.... .....+.. +.
T Consensus 20 ~v~~~~~spdg~~l~~~~~~----------------------------------~v~v~~~~~~~~~~~~~~~~~~--h~ 63 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGK----------------------------------SAFVRCLDDGDSKVPPVVQFTG--HG 63 (615)
T ss_dssp CCCCCEEETTTTEEEEEETT----------------------------------EEEEEECCSSCCSSCSEEEECT--TT
T ss_pred ceeEEEECCCCCEEEEecCC----------------------------------eEEEEECCCCCCccccceEEec--CC
Confidence 57789999999999998853 6799998531100 12334433 22
Q ss_pred Cc-ccceEecc--CCCeEEEEEeeccccCCCCcceEEEEECCCC--------ceeecccCCCccccccccceEEecCCeE
Q 002209 189 AK-LNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTG--------KARPLFQSPDIYLNAIFDNFVWVNNSTL 257 (953)
Q Consensus 189 ~~-~~~~~wSP--DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g--------~~~~lt~~~~~~~~~~~~~~~wspDg~~ 257 (953)
.. +....||| ||++|+.... ...|.++++.++ +.......... .+..++|+|||+.
T Consensus 64 ~~~v~~~~~sp~~~~~~l~s~~~---------dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~ 130 (615)
T 1pgu_A 64 SSVVTTVKFSPIKGSQYLCSGDE---------SGKVIVWGWTFDKESNSVEVNVKSEFQVLAG----PISDISWDFEGRR 130 (615)
T ss_dssp TSCEEEEEECSSTTCCEEEEEET---------TSEEEEEEEEEEGGGTEEEEEEEEEEECCSS----CEEEEEECTTSSE
T ss_pred CceEEEEEECcCCCCCEEEEecC---------CCEEEEEeCCCCcccccccccccchhhcccc----cEEEEEEeCCCCE
Confidence 46 89999999 9999988552 446667776544 22221111121 2778999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCC-Ccccc
Q 002209 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTS 336 (953)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~ 336 (953)
|++...+. + ....|++++.......+... ..+..
T Consensus 131 l~~~~~~~--------------------------------------~-------~~~~v~~~d~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 131 LCVVGEGR--------------------------------------D-------NFGVFISWDSGNSLGEVSGHSQRINA 165 (615)
T ss_dssp EEEEECCS--------------------------------------S-------CSEEEEETTTCCEEEECCSCSSCEEE
T ss_pred EEEeccCC--------------------------------------C-------CccEEEEEECCCcceeeecCCccEEE
Confidence 98772110 0 12355555543344444444 77889
Q ss_pred cccCCCCcE-EEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccC-CCCc
Q 002209 337 LDPSPDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSD-KPST 413 (953)
Q Consensus 337 ~~~SpDG~~-l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspD-g~~i 413 (953)
++|+|||+. |+..+.+ +.|.+||+..++.. .+..+... ...+..++|+|| |+.+
T Consensus 166 ~~~~~~~~~~l~~~~~d-------------~~v~vwd~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l 222 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDD-------------GSVVFYQGPPFKFSASDRTHHKQ----------GSFVRDVEFSPDSGEFV 222 (615)
T ss_dssp EEECSSSSCEEEEEETT-------------TEEEEEETTTBEEEEEECSSSCT----------TCCEEEEEECSTTCCEE
T ss_pred EEECCCCCcEEEEEeCC-------------CcEEEEeCCCcceeeeecccCCC----------CceEEEEEECCCCCCEE
Confidence 999999994 5554422 48999999865543 33322110 013567999999 8876
Q ss_pred eEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEE-e---ecccccCCeeeccCCceEEEEEecccCceEEEEEcC
Q 002209 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL-H---KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (953)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l-~---~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~ 488 (953)
+.. +..+.+.+|++ ..++. ..+ . .+...+..+.|+ |++.|+....++ .+.++++
T Consensus 223 ~~~-------------~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~----~i~~wd~ 281 (615)
T 1pgu_A 223 ITV-------------GSDRKISCFDG---KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADA----TIRVWDV 281 (615)
T ss_dssp EEE-------------ETTCCEEEEET---TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTS----EEEEEET
T ss_pred EEE-------------eCCCeEEEEEC---CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCC----cEEEEEC
Confidence 655 44568999996 43443 333 2 556667789999 999888876543 4666676
Q ss_pred CCC
Q 002209 489 GSK 491 (953)
Q Consensus 489 ~~~ 491 (953)
.++
T Consensus 282 ~~~ 284 (615)
T 1pgu_A 282 TTS 284 (615)
T ss_dssp TTT
T ss_pred CCC
Confidence 654
No 268
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.51 E-value=5.2e-14 Score=151.88 Aligned_cols=221 Identities=15% Similarity=0.130 Sum_probs=139.2
Q ss_pred ceEEEEEEcC-CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH------
Q 002209 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA------ 710 (953)
Q Consensus 638 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~------ 710 (953)
.++.+++.+. -|.....++|+|+++++. ..++|||+++||... |.. .......++.
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG~~~---------------f~~-~~~~~~~l~~~~~~~~ 73 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDGEDQ---------------FDH-MASLLQFLSQGTMPQI 73 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSHHHH---------------HHH-HHHHHHHHTCSSSCSS
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecChhh---------------hHH-HHHHHHHHHhhhhcCC
Confidence 4567777765 478899999999998763 236999999999410 100 0112223332
Q ss_pred cCcEEEEcCCCC----C---------CCCC--Chh----hhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHH
Q 002209 711 RGFAILGGPTTP----I---------IGEG--DEE----ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAF 771 (953)
Q Consensus 711 ~G~~V~~~~~~~----~---------~G~G--~~~----~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 771 (953)
.+++||.+++.+ + .|.. ... ....+.....+ +.+.++.++..+++.+ +|+|+||||+
T Consensus 74 ~~~IvV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~---el~p~i~~~~~~~~~r-~i~G~S~GG~ 149 (331)
T 3gff_A 74 PKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEK---ELAPSIESQLRTNGIN-VLVGHSFGGL 149 (331)
T ss_dssp CCCEEEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHH---THHHHHHHHSCEEEEE-EEEEETHHHH
T ss_pred CCEEEEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHHH---HHHHHHHHHCCCCCCe-EEEEECHHHH
Confidence 358888754310 0 1100 000 01122222222 4455666666676655 8999999999
Q ss_pred HHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCC-------CC
Q 002209 772 MTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDN-------NS 844 (953)
Q Consensus 772 ~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~-------~v 844 (953)
+|++++.++|++|+++++.+|.+.+.. ............ .....+.|+++.||+.|. .+
T Consensus 150 ~al~~~~~~p~~F~~~~~~S~~~w~~~---------~~~~~~~~~~~~-----~~~~~~~~l~l~~G~~d~~~~~~~~~~ 215 (331)
T 3gff_A 150 VAMEALRTDRPLFSAYLALDTSLWFDS---------PHYLTLLEERVV-----KGDFKQKQLFMAIANNPLSPGFGVSSY 215 (331)
T ss_dssp HHHHHHHTTCSSCSEEEEESCCTTTTT---------THHHHHHHHHHH-----HCCCSSEEEEEEECCCSEETTTEECCH
T ss_pred HHHHHHHhCchhhheeeEeCchhcCCh---------HHHHHHHHHHhh-----cccCCCCeEEEEeCCCCCCCccchHHH
Confidence 999999999999999999999753211 011111111111 112245799999999998 45
Q ss_pred CCchHHHHHHHHHHHhC---CCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 845 GTLTMQSDRFFNALKGH---GALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 845 ~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+ ...+++++++|+.. |.++++.+||+++|+... ...+...++||-....
T Consensus 216 ~--~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 216 H--KDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp H--HHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGGGC
T ss_pred H--HHHHHHHHHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhhcC
Confidence 5 77889999999986 778999999999997532 3334555666655443
No 269
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.51 E-value=2.5e-13 Score=145.87 Aligned_cols=215 Identities=13% Similarity=0.127 Sum_probs=132.7
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|.+++.... + . .|.||++||..... .....|. .....|+ ++|.|++ +|.+|+
T Consensus 23 ~~g~~l~y~~~---g-----~--g~~vvllHG~~~~~-----------~~~~~~~-~~~~~L~-~~~~vi~---~Dl~G~ 76 (296)
T 1j1i_A 23 AGGVETRYLEA---G-----K--GQPVILIHGGGAGA-----------ESEGNWR-NVIPILA-RHYRVIA---MDMLGF 76 (296)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCSTTC-----------CHHHHHT-TTHHHHT-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCc-----------chHHHHH-HHHHHHh-hcCEEEE---ECCCCC
Confidence 47877765543 1 1 35789999952100 0000111 1233444 4599999 455678
Q ss_pred CChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCC-----
Q 002209 727 GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT----- 799 (953)
Q Consensus 727 G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~----- 799 (953)
|.+... .......++|+.+.++.+ + + .+++.|+||||||.+++.++.++|++++++|++++.......
T Consensus 77 G~S~~~~~~~~~~~~~~dl~~~l~~l---~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 151 (296)
T 1j1i_A 77 GKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR 151 (296)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHH
Confidence 877521 113455566666655443 2 2 158999999999999999999999999999998875421000
Q ss_pred C-cCcc---------------ccc-------chhhhh------HHHHHh-----------cCcccccCCCCCcEEEEEeC
Q 002209 800 P-FGFQ---------------NED-------RTLWEA------TSTYVE-----------MSPFMSANKLKKPILLVHGE 839 (953)
Q Consensus 800 ~-~~~~---------------~~~-------~~~~~~------~~~~~~-----------~sp~~~~~~i~~P~Li~~G~ 839 (953)
. +.+. ... ...+.. ...+.. ......+.++++|+|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~ 231 (296)
T 1j1i_A 152 PIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 231 (296)
T ss_dssp ----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHhcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEEC
Confidence 0 0000 000 000000 000100 01123457889999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
+|..+| ++.+.++.+.+. ..++++++++||... .+..+.+.+.+.+||.+.+.
T Consensus 232 ~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 232 DDKVVP--VETAYKFLDLID----DSWGYIIPHCGHWAM-IEHPEDFANATLSFLSLRVD 284 (296)
T ss_dssp TCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHHC--
T ss_pred CCcccC--HHHHHHHHHHCC----CCEEEEECCCCCCch-hcCHHHHHHHHHHHHhccCC
Confidence 999998 888888776653 368999999999763 56677888999999988763
No 270
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.51 E-value=8.2e-14 Score=147.56 Aligned_cols=197 Identities=13% Similarity=0.156 Sum_probs=126.4
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh------hhHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND------RFVEQLVACA 743 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~------~~~~~~~~D~ 743 (953)
.|.||++||..... ..|.. ....|+ .+|.|++ +|.+|+|.+.... .......+|+
T Consensus 20 ~~~vvllHG~~~~~-----------~~w~~----~~~~L~-~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl 80 (271)
T 1wom_A 20 KASIMFAPGFGCDQ-----------SVWNA----VAPAFE-EDHRVIL---FDYVGSGHSDLRAYDLNRYQTLDGYAQDV 80 (271)
T ss_dssp SSEEEEECCTTCCG-----------GGGTT----TGGGGT-TTSEEEE---CCCSCCSSSCCTTCCTTGGGSHHHHHHHH
T ss_pred CCcEEEEcCCCCch-----------hhHHH----HHHHHH-hcCeEEE---ECCCCCCCCCCCcccccccccHHHHHHHH
Confidence 37899999953211 11211 122343 4799999 5667888774321 2356667777
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC--c--Ccccc-----------cc
Q 002209 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--F--GFQNE-----------DR 808 (953)
Q Consensus 744 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~--~--~~~~~-----------~~ 808 (953)
.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++........ + .+... ..
T Consensus 81 ~~~l~~l------~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T 1wom_A 81 LDVCEAL------DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNY 154 (271)
T ss_dssp HHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhH
Confidence 7766654 23689999999999999999999999999999987642110000 0 00000 00
Q ss_pred hhh---------------hhHH----HHHh---------------cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHH
Q 002209 809 TLW---------------EATS----TYVE---------------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (953)
Q Consensus 809 ~~~---------------~~~~----~~~~---------------~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~ 854 (953)
..| +..+ .+.. .+....+.++++|+|+++|++|..+| +..++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--~~~~~~~ 232 (271)
T 1wom_A 155 IGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAP--ATVGKYM 232 (271)
T ss_dssp HHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCC--HHHHHHH
Confidence 000 0000 0000 11123456789999999999999988 7777777
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
.+.+. ..++++++++||... .+..+.+.+.+.+||++++
T Consensus 233 ~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 233 HQHLP----YSSLKQMEARGHCPH-MSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHHCC----CCEEEEeCCCCcCcc-ccCHHHHHHHHHHHHHhcC
Confidence 66553 368999999999763 5667788899999998753
No 271
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.50 E-value=2.4e-13 Score=142.52 Aligned_cols=196 Identities=14% Similarity=0.100 Sum_probs=123.6
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh-hhHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND-RFVEQLVACAEAAVE 748 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~~~~ 748 (953)
.|.||++||.+... ..| ......|++ .|.|++ .|.+|+|.+.... .......+|+.+.++
T Consensus 16 ~~~vvllHG~~~~~-----------~~w----~~~~~~L~~-~~~via---~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 16 NSPIVLVHGLFGSL-----------DNL----GVLARDLVN-DHNIIQ---VDVRNHGLSPREPVMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCTTCCT-----------TTT----HHHHHHHTT-TSCEEE---ECCTTSTTSCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCcccH-----------hHH----HHHHHHHHh-hCcEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46789999963211 112 123344544 499999 4556788775432 234566778777777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC-CCCCCCCc-------------Ccccc--------
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA-YNRTLTPF-------------GFQNE-------- 806 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~-~d~~~~~~-------------~~~~~-------- 806 (953)
.+ +.+++.|+||||||.+++.++.++|++++++|++++. .......+ .....
T Consensus 77 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T 3bf7_A 77 AL------QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150 (255)
T ss_dssp HH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHT
T ss_pred Hc------CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHh
Confidence 65 2358999999999999999999999999999987532 11000000 00000
Q ss_pred ---cchh-------------hh-hHHH----HHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcE
Q 002209 807 ---DRTL-------------WE-ATST----YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALC 865 (953)
Q Consensus 807 ---~~~~-------------~~-~~~~----~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 865 (953)
.... |. .... +........+.++++|+|+++|++|..++ +..+.++.+.+. ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~----~~ 224 (255)
T 3bf7_A 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS--EQYRDDLLAQFP----QA 224 (255)
T ss_dssp TTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTC--GGGHHHHHHHCT----TE
T ss_pred hhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCC--HHHHHHHHHHCC----CC
Confidence 0000 00 0000 00000001245789999999999999988 877777765543 36
Q ss_pred EEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 866 RLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 866 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
+++++|++||... .+....+.+.+.+|+.+|
T Consensus 225 ~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp EECCBTTCCSCHH-HHCHHHHHHHHHHHHHTC
T ss_pred eEEEeCCCCCccc-cCCHHHHHHHHHHHHhcC
Confidence 9999999999863 456678888899998753
No 272
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.50 E-value=1.3e-13 Score=146.13 Aligned_cols=245 Identities=14% Similarity=0.171 Sum_probs=146.6
Q ss_pred ceEEEEEEcC-CCcEEEEEEEcCCCCCCC---CCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCc
Q 002209 638 QKELIKYQRK-DGVQLSATLYLPPGYDPS---KDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (953)
Q Consensus 638 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (953)
...++++.+. -|.++...+|+|+++... +.+++|||.++||.... ...|...+ ...+..++.|.
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~-----------~~~w~~~~-~~~~~~~~~~~ 80 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCT-----------PDNASEKA-FWQFQADKYGF 80 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCC-----------HHHHHHHS-CHHHHHHHHTC
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCC-----------hHHHHHhc-hHhHHHHHcCc
Confidence 3456666653 567899999999987532 23469999999995311 11111111 12234556799
Q ss_pred EEEEcCCCCC-------------CCCCChh----------hhhhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEe
Q 002209 714 AILGGPTTPI-------------IGEGDEE----------ANDRFVEQLVACAEAAVEEVVR----RGVAHPSKIAVGGH 766 (953)
Q Consensus 714 ~V~~~~~~~~-------------~G~G~~~----------~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~~i~l~G~ 766 (953)
++++++.... .|.+..+ ....+....++++...++.--. +...+.++.+|+|+
T Consensus 81 ~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~ 160 (299)
T 4fol_A 81 AIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGI 160 (299)
T ss_dssp EEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEB
T ss_pred hhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEec
Confidence 9988553211 0111111 0123345556666666554221 11234578999999
Q ss_pred ChHHHHHHHHHHhC--CCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCC---C-CCcEEEEEeCC
Q 002209 767 SYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANK---L-KKPILLVHGEE 840 (953)
Q Consensus 767 S~GG~~a~~~a~~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~---i-~~P~Li~~G~~ 840 (953)
||||+.|+.++.++ |+.|.++.+.+|+.+....++...........+...+..+++...+.+ . ..++||-+|++
T Consensus 161 SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~ 240 (299)
T 4fol_A 161 SMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDS 240 (299)
T ss_dssp THHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETT
T ss_pred CchHHHHHHHHHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCC
Confidence 99999999999985 678999999999876543333222111111122233334444433332 2 35799999999
Q ss_pred CCCCCCchH-HHHHHHHHHHhCCCc--EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhcc
Q 002209 841 DNNSGTLTM-QSDRFFNALKGHGAL--CRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (953)
Q Consensus 841 D~~v~~~~~-~~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (953)
|.... .. ....|.+++++++.+ +++...||.+|.+. -...+.+..+.|..++|+
T Consensus 241 D~f~~--~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~---f~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 241 DPFLE--EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYY---FVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp CTTHH--HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred Ccchh--hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHH---HHHHHHHHHHHHHHHhcC
Confidence 98642 11 136788999888866 78999999899763 234556777888888875
No 273
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.50 E-value=7.8e-14 Score=152.48 Aligned_cols=205 Identities=15% Similarity=0.110 Sum_probs=128.5
Q ss_pred CcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCC
Q 002209 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGD 728 (953)
Q Consensus 649 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~ 728 (953)
+..+....+-+. .|+||++||..... ..+...+...||.|+++| .+|+|.
T Consensus 69 ~~~~~~~~~g~~---------~~~vv~~hG~~~~~------------------~~~~~~~~~lg~~Vi~~D---~~G~G~ 118 (330)
T 3p2m_A 69 AGAISALRWGGS---------APRVIFLHGGGQNA------------------HTWDTVIVGLGEPALAVD---LPGHGH 118 (330)
T ss_dssp ETTEEEEEESSS---------CCSEEEECCTTCCG------------------GGGHHHHHHSCCCEEEEC---CTTSTT
T ss_pred CceEEEEEeCCC---------CCeEEEECCCCCcc------------------chHHHHHHHcCCeEEEEc---CCCCCC
Confidence 345666665321 46799999963211 111223345599999954 467777
Q ss_pred hhhh---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC---------
Q 002209 729 EEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR--------- 796 (953)
Q Consensus 729 ~~~~---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~--------- 796 (953)
+... .......++|+.++++.+ +.+++.|+||||||.+++.++.++|++++++|++++....
T Consensus 119 S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 192 (330)
T 3p2m_A 119 SAWREDGNYSPQLNSETLAPVLREL------APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTA 192 (330)
T ss_dssp SCCCSSCBCCHHHHHHHHHHHHHHS------STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhh
Confidence 7532 123456667776666554 3468999999999999999999999999999999864220
Q ss_pred CC---CC-----cCcccccch--------hhhhHHHH----Hhc-------------C----------cccccCCCCCcE
Q 002209 797 TL---TP-----FGFQNEDRT--------LWEATSTY----VEM-------------S----------PFMSANKLKKPI 833 (953)
Q Consensus 797 ~~---~~-----~~~~~~~~~--------~~~~~~~~----~~~-------------s----------p~~~~~~i~~P~ 833 (953)
.. .. ..+...... .......+ ... . ....+.++++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 272 (330)
T 3p2m_A 193 EQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPI 272 (330)
T ss_dssp C-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCE
T ss_pred hhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCE
Confidence 00 00 000000000 00000000 000 0 012345678999
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEE-EEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCR-LVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 834 Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
|+++|++|..+| ++.+.++.+.+.. .+ +++++++||... .+..+.+.+.+.+||++
T Consensus 273 Lii~G~~D~~v~--~~~~~~l~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 273 TLVRGGSSGFVT--DQDTAELHRRATH----FRGVHIVEKSGHSVQ-SDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEEEETTCCSSC--HHHHHHHHHHCSS----EEEEEEETTCCSCHH-HHCHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhCCC----CeeEEEeCCCCCCcc-hhCHHHHHHHHHHHHhc
Confidence 999999999998 8888887776643 46 999999999863 45667777888888753
No 274
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.50 E-value=4.4e-12 Score=139.23 Aligned_cols=304 Identities=10% Similarity=-0.025 Sum_probs=163.3
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCce-eeeecCCCCCcc
Q 002209 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGFPDGAKL 191 (953)
Q Consensus 113 ~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~-~~l~~~~~~~~~ 191 (953)
.++++++++.++....+ +.|++||+.+ ++. +.+. +......
T Consensus 4 g~~~~~~~~~~v~~~~~---------------------------------~~v~~~d~~~----~~~~~~~~-~~~~~~~ 45 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYP---------------------------------NNLHVVDVAS----DTVYKSCV-MPDKFGP 45 (349)
T ss_dssp CCCCCTTCEEEEEEETT---------------------------------TEEEEEETTT----TEEEEEEE-CSSCCSS
T ss_pred cccccCCCEEEEEeCCC---------------------------------CeEEEEECCC----CcEEEEEe-cCCCCCC
Confidence 56788888877666543 3789999843 332 2232 2221147
Q ss_pred cceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcc--ccccccceEEecCCeEEEEEecCCCCCC
Q 002209 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY--LNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 192 ~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
..+.|+|||+.+++... ....|+++|+++++.......+... ....+..++|+|||+.|+++.......
T Consensus 46 ~~~~~s~dg~~~~v~~~--------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~- 116 (349)
T 1jmx_B 46 GTAMMAPDNRTAYVLNN--------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL- 116 (349)
T ss_dssp CEEEECTTSSEEEEEET--------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEEC-
T ss_pred ceeEECCCCCEEEEEeC--------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccc-
Confidence 78999999998877542 3568999999988765433322100 000145789999999999872110000
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE----eCCCCcccccccCCCCc
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE----IGPPAVYTSLDPSPDEK 344 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~----l~~~~~~~~~~~SpDG~ 344 (953)
....+ .....|+++|+ +++... ...+..+..++|||||+
T Consensus 117 ------------------------------~~~~~------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 117 ------------------------------NDHYV------VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp ------------------------------SSCEE------ECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred ------------------------------ccccc------cCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 00000 01357889998 754322 22224566778999999
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccCceEEE-eccCCCcccCCcc---------cccc----ccCccceeeccCC
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIA---------FNSV----RKGMRSINWRSDK 410 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~-l~~~~~~~~~p~~---------~~~~----~~~~~~~~wspDg 410 (953)
|++.. .+|++||+.+++... +..... ..+.. .... ...+..+.+++|+
T Consensus 161 -l~~~~---------------~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 161 -LYVAG---------------PDIYKMDVKTGKYTVALPLRNW--NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp -EEEES---------------SSEEEECTTTCCEEEEECSTTC--CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred -EEEcc---------------CcEEEEeCCCCceecccccccc--CCccccCccceeeecCCCcceeEEeeeeeeecCCC
Confidence 55432 269999998655443 322110 00000 0000 0001123333333
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee--cccccCCeeecc-CCceEEEEEecccCceEEEEEc
Q 002209 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCD-DSLALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~--~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~~d 487 (953)
+..... ......++.++. .+++.+.+.. .......+.||| ||+.|+.. . ..|+++|
T Consensus 223 ~~~~~~------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~----~~v~~~d 281 (349)
T 1jmx_B 223 KQDPAT------------ADLLYGYLSVDL---KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--L----NRLAKYD 281 (349)
T ss_dssp ----CC------------CEEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--E----SEEEEEE
T ss_pred cCCccc------------cccceeEEEEec---cCCcEEecccccCCCcceeeEecCCCCCEEEEE--c----CeEEEEE
Confidence 211000 011223344664 4455444422 233445689999 99988776 1 2789999
Q ss_pred CCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEE
Q 002209 488 PGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (953)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l 567 (953)
+.++ +......... .... +.|+|||++|+.... ...|++||+++++....
T Consensus 282 ~~~~--~~~~~~~~~~-~~~~------~~~s~dg~~l~~~~~---------------------~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 282 LKQR--KLIKAANLDH-TYYC------VAFDKKGDKLYLGGT---------------------FNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp TTTT--EEEEEEECSS-CCCE------EEECSSSSCEEEESB---------------------SSEEEEEETTTTEEEEE
T ss_pred CccC--eEEEEEcCCC-Cccc------eEECCCCCEEEEecC---------------------CCeEEEEeccccceeee
Confidence 8875 3222222111 1111 789999998877431 12499999988875543
Q ss_pred e
Q 002209 568 W 568 (953)
Q Consensus 568 ~ 568 (953)
.
T Consensus 332 ~ 332 (349)
T 1jmx_B 332 I 332 (349)
T ss_dssp E
T ss_pred e
Confidence 3
No 275
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.50 E-value=1.6e-12 Score=143.74 Aligned_cols=261 Identities=12% Similarity=0.093 Sum_probs=153.9
Q ss_pred ceEEEEccCCCCCCceeeeecCC---CCCcccceEeccC----CCeEEEEEeeccccCCCCcceEEEEECCCCceeeccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFP---DGAKLNFVTWSQD----GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQ 236 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~---~~~~~~~~~wSPD----G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~ 236 (953)
.|.+|++.+.. ..+.+..+. ....+....|+|| |+.|+... ....|.++++.+++......
T Consensus 45 ~v~vw~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~---------~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 45 RVTLYECHSQG---EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG---------SRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp EEEEEEECGGG---CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE---------TTCEEEEECTTTCCEEEEEE
T ss_pred EEEEEEcCCCc---EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec---------CCCEEEEEEchhceEeeeec
Confidence 57899985422 222332221 2236888999999 55676644 25689999998887654443
Q ss_pred CCCccccccccceEEec-CCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccce
Q 002209 237 SPDIYLNAIFDNFVWVN-NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQ 315 (953)
Q Consensus 237 ~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 315 (953)
..... +..+.|+| |++.|+... ..+.
T Consensus 113 ~~~~~----i~~~~~~~~~~~~l~s~~-------------------------------------------------~dg~ 139 (366)
T 3k26_A 113 GHGNA----INELKFHPRDPNLLLSVS-------------------------------------------------KDHA 139 (366)
T ss_dssp SCCSC----EEEEEECSSCTTEEEEEE-------------------------------------------------TTSC
T ss_pred CCCCc----EEEEEECCCCCCEEEEEe-------------------------------------------------CCCe
Confidence 22222 77899999 888888661 2246
Q ss_pred EEEEEc-CCceeEeC----CC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEE-ecc----C
Q 002209 316 LVLVSL-DGTVKEIG----PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCD----L 384 (953)
Q Consensus 316 l~~~~~-~g~~~~l~----~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~-l~~----~ 384 (953)
|.++|+ +++..... .. ..+..++|+|||++|+....+ +.|.+||+..+.... +.. .
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------------HSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESCSHHHHHHHHHHHTCC
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-------------CCEEEEECCCCccccccceeEEec
Confidence 778888 66544432 33 778899999999999888744 389999998543221 110 0
Q ss_pred CCcccC---------Cc--cccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC------
Q 002209 385 PLAEDI---------PI--AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG------ 447 (953)
Q Consensus 385 ~~~~~~---------p~--~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~------ 447 (953)
+..... +. ........+..++|+ |+.++.. +..+.+.+|++ ..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-------------~~d~~i~~wd~--~~~~~~~~~~~ 269 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK-------------SCENAIVCWKP--GKMEDDIDKIK 269 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE-------------CSSSEEEEEEE--SSTTCCGGGCC
T ss_pred CCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE-------------ecCCEEEEEeC--CCccccccccc
Confidence 000000 00 001123345667887 4544433 44567888886 22211
Q ss_pred --------ceEEeecccccCCeeeccC--CceEEEEEecccCceEEEEEcCCCCCCCc--EEeecCC--CccccCCCCCC
Q 002209 448 --------PEILHKLDLRYGGISWCDD--SLALVYESWYKTRRTRTWVISPGSKDVAP--RILFDRS--SEDVYSDPGSP 513 (953)
Q Consensus 448 --------~~~l~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~l~~~d~~~~~~~~--~~~~~~~--~~~~~~~~~~p 513 (953)
...+..+...+..+.|+|| |+.|+....++ .|+++++.++.... ....... ...+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~----- 340 (366)
T 3k26_A 270 PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG----KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQ----- 340 (366)
T ss_dssp TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS----CEEEEECCSSSGGGCEEEEECCTTCCSCEEE-----
T ss_pred cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC----cEEEEECCCCCCccccceEEcccccCCceEE-----
Confidence 1223344556778999999 99888775443 45556665542111 1112222 222333
Q ss_pred CeEeccCCCEEEEEee
Q 002209 514 MMRRTSTGTYVIAKIK 529 (953)
Q Consensus 514 ~~~~SpDG~~l~~~~~ 529 (953)
+.|+|||++|+....
T Consensus 341 -~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 341 -TSFSRDSSILIAVCD 355 (366)
T ss_dssp -EEECTTSSEEEEEET
T ss_pred -EEeCCCCCeEEEEeC
Confidence 789999999987763
No 276
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.49 E-value=2.3e-12 Score=146.71 Aligned_cols=304 Identities=11% Similarity=0.064 Sum_probs=172.8
Q ss_pred CcccceEecc-CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEec-CCeEEEEEecCCC
Q 002209 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLLR 266 (953)
Q Consensus 189 ~~~~~~~wSP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~~~ 266 (953)
..+...+|+| +++.||... ....|.+||+++++...+..... ....+..++|+| |++.|+.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs---------~dg~i~lWd~~~~~~~~~~~~~g--H~~~V~~l~f~p~~~~~l~s~s---- 184 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGS---------KGGDIMLWNFGIKDKPTFIKGIG--AGGSITGLKFNPLNTNQFYASS---- 184 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEE---------TTSCEEEECSSCCSCCEEECCCS--SSCCCCEEEECSSCTTEEEEEC----
T ss_pred CCEEEEEEeCCCCCEEEEEe---------CCCEEEEEECCCCCceeEEEccC--CCCCEEEEEEeCCCCCEEEEEe----
Confidence 4688899999 456666633 35578888888765433322111 122378999998 677877551
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC----CcccccccCC
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP----AVYTSLDPSP 341 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~----~~~~~~~~Sp 341 (953)
..+.|.++|+ ++..+.+... ..+..++|+|
T Consensus 185 ---------------------------------------------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 185 ---------------------------------------------MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp ---------------------------------------------SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET
T ss_pred ---------------------------------------------CCCEEEEeeccCCceeEEeccCCCCccEEEEEECC
Confidence 1234566777 5544444332 3456789999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEecc
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~ 421 (953)
||+.|+....+ +.|.+||++++....+..+ ...+..++|+|+++.++...
T Consensus 220 ~~~~l~~g~~d-------------g~i~~wd~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~~~s~---- 269 (435)
T 4e54_B 220 SSRMVVTGDNV-------------GNVILLNMDGKELWNLRMH-------------KKKVTHVALNPCCDWFLATA---- 269 (435)
T ss_dssp TTTEEEEECSS-------------SBEEEEESSSCBCCCSBCC-------------SSCEEEEEECTTCSSEEEEE----
T ss_pred CCCEEEEEeCC-------------CcEeeeccCcceeEEEecc-------------cceEEeeeecCCCceEEEEe----
Confidence 99999887644 3899999987654443322 23456799999998766541
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceE---EeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEI---LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~---l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
+....|.+||+ ..+..... ...+...+..++|||||++|+..+.++ .|.++++.++. ....+
T Consensus 270 --------s~d~~v~iwd~--~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~----~i~iwd~~~~~-~~~~~ 334 (435)
T 4e54_B 270 --------SVDQTVKIWDL--RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS----EIRVYSASQWD-CPLGL 334 (435)
T ss_dssp --------ETTSBCCEEET--TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS----CEEEEESSSSS-SEEEE
T ss_pred --------cCcceeeEEec--ccccccceEEEeeeccccccceeECCCCCeeEEEcCCC----EEEEEECCCCc-cceEE
Confidence 23456778886 22221111 234455677899999999998876554 35555655542 22222
Q ss_pred ecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEec-cCccccee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE-SDKEKYYE 577 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~-~~~~~~~~ 577 (953)
...... .......-...|+|++..++...... +..++... .+...|++||..+++...... ....
T Consensus 335 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~------~~~~~i~iwd~~~g~~~~~l~~~~~~---- 400 (435)
T 4e54_B 335 IPHPHR-HFQHLTPIKAAWHPRYNLIVVGRYPD---PNFKSCTP------YELRTIDVFDGNSGKMMCQLYDPESS---- 400 (435)
T ss_dssp CCCCCC-CCSSSCCCBCEECSSSSCEEEECCCC---TTSCCSST------TCCCCEEEECSSSCCEEEEECCSSCC----
T ss_pred eccccc-ccccceeEEEEEcCCCCEEEEEEcCC---CCeEEEEe------cCCCEEEEEECCCCcEEEEEeCCCCC----
Confidence 211111 00000111146889988887665321 11111111 112348999998887654332 2211
Q ss_pred eeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002209 578 TTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (953)
Q Consensus 578 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~ 622 (953)
.+..+ ..|+|||+.|+ ..+. ..|++|++.+|+.+
T Consensus 401 ~v~s~------~~fspdg~~la-sg~d----~~i~iW~~~~gk~r 434 (435)
T 4e54_B 401 GISSL------NEFNPMGDTLA-SAMG----YHILIWSQQEARTR 434 (435)
T ss_dssp CCCCE------EEECTTSSCEE-EECS----SEEEECCCC-----
T ss_pred cEEEE------EEECCCCCEEE-EEcC----CcEEEEECCcCeee
Confidence 01111 25899998665 3321 36899998888654
No 277
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.49 E-value=7.5e-13 Score=141.21 Aligned_cols=217 Identities=18% Similarity=0.199 Sum_probs=131.9
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEc
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~ 718 (953)
.+...+...+|.+++...+-+++ +.|.||++||.+... ..| ......|+ .||.|++
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~~-----------~~~----~~~~~~L~-~~~~vi~- 60 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI-------SRPPVLCLPGLTRNA-----------RDF----EDLATRLA-GDWRVLC- 60 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT-------TSCCEEEECCTTCCG-----------GGG----HHHHHHHB-BTBCEEE-
T ss_pred cccCeeecCCCceEEEEEcCCCC-------CCCcEEEECCCCcch-----------hhH----HHHHHHhh-cCCEEEe-
Confidence 34556777899999888775432 135689999963211 011 12333444 4999999
Q ss_pred CCCCCCCCCChhhh----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC-
Q 002209 719 PTTPIIGEGDEEAN----DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA- 793 (953)
Q Consensus 719 ~~~~~~G~G~~~~~----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~- 793 (953)
+|.+|+|.+... ........+|+.+.++.+ ..+++.|+||||||.+|+.+|.++|++++++|+.++.
T Consensus 61 --~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 132 (285)
T 3bwx_A 61 --PEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQE------GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGP 132 (285)
T ss_dssp --ECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred --ecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCc
Confidence 555688877532 123566678888877765 2358999999999999999999999999999986421
Q ss_pred -CCCC-----------CCCc-C---------------cccccchhhhhHH--HHHh---------cCc-----cc-----
Q 002209 794 -YNRT-----------LTPF-G---------------FQNEDRTLWEATS--TYVE---------MSP-----FM----- 824 (953)
Q Consensus 794 -~d~~-----------~~~~-~---------------~~~~~~~~~~~~~--~~~~---------~sp-----~~----- 824 (953)
.... .... . +.......|.... .+.. ..+ +.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 3bwx_A 133 EVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGA 212 (285)
T ss_dssp SCCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTC
T ss_pred ccCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhc
Confidence 1100 0000 0 0000000011000 0000 000 00
Q ss_pred --------ccCCC-CCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 825 --------SANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 825 --------~~~~i-~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
.+.++ ++|+|+++|++|..++ +..+.++.+ . ...++++++++||... .+..+. +..+.+||.
T Consensus 213 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~----~-~~~~~~~i~~~gH~~~-~e~p~~-~~~i~~fl~ 283 (285)
T 3bwx_A 213 TPQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAKMAS----R-PGVELVTLPRIGHAPT-LDEPES-IAAIGRLLE 283 (285)
T ss_dssp CCSSCCHHHHHHHTTSCEEEEEETTCSSSC--HHHHHHHHT----S-TTEEEEEETTCCSCCC-SCSHHH-HHHHHHHHT
T ss_pred cccchhhHHHHHccCCCeEEEEeCCCCccC--HHHHHHHHh----C-CCcEEEEeCCCCccch-hhCchH-HHHHHHHHH
Confidence 01123 7899999999999988 766655543 3 4579999999999864 344444 467888875
Q ss_pred H
Q 002209 896 K 896 (953)
Q Consensus 896 ~ 896 (953)
+
T Consensus 284 ~ 284 (285)
T 3bwx_A 284 R 284 (285)
T ss_dssp T
T ss_pred h
Confidence 3
No 278
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.49 E-value=4e-13 Score=141.62 Aligned_cols=196 Identities=9% Similarity=-0.019 Sum_probs=123.7
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh---hhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~ 746 (953)
.|.||++||..... ..| . .....|+++||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 10 g~~vvllHG~~~~~-----------~~w---~-~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 71 (264)
T 2wfl_A 10 QKHFVLVHGGCLGA-----------WIW---Y-KLKPLLESAGHKVTA---VDLSAAGINPRRLDEIHTFRDYSEPLMEV 71 (264)
T ss_dssp CCEEEEECCTTCCG-----------GGG---T-THHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCcccc-----------chH---H-HHHHHHHhCCCEEEE---eecCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 57899999963211 112 1 245567789999999 5556888774321 2356667777776
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC-CC---------------cC------cc
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-TP---------------FG------FQ 804 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~-~~---------------~~------~~ 804 (953)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++...... .. +. +.
T Consensus 72 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
T 2wfl_A 72 MASI---PP--DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYG 146 (264)
T ss_dssp HHHS---CT--TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEES
T ss_pred HHHh---CC--CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhcc
Confidence 6654 21 25899999999999999999999999999999876421100 00 00 00
Q ss_pred ---c-----ccc-hhhh-------hH--HHHH-h-cCcc----------ccc--C-CCCCcEEEEEeCCCCCCCCchHHH
Q 002209 805 ---N-----EDR-TLWE-------AT--STYV-E-MSPF----------MSA--N-KLKKPILLVHGEEDNNSGTLTMQS 851 (953)
Q Consensus 805 ---~-----~~~-~~~~-------~~--~~~~-~-~sp~----------~~~--~-~i~~P~Li~~G~~D~~v~~~~~~~ 851 (953)
. ... .... .. ..+. . ..+. ... . ..++|+|+++|++|..+| +..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~ 224 (264)
T 2wfl_A 147 NPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFP--VEFQ 224 (264)
T ss_dssp CTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHH
T ss_pred CCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCC--HHHH
Confidence 0 000 0000 00 0000 0 0110 000 1 135799999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
+++.+.+.. .++++++++||... .+..+.+.+.+.+|+.
T Consensus 225 ~~~~~~~p~----~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 225 KWFVESVGA----DKVKEIKEADHMGM-LSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHCC----SEEEEETTCCSCHH-HHSHHHHHHHHHHHHC
T ss_pred HHHHHhCCC----ceEEEeCCCCCchh-hcCHHHHHHHHHHHhh
Confidence 888777743 38899999999863 5667788888888864
No 279
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.49 E-value=3.7e-13 Score=145.51 Aligned_cols=207 Identities=14% Similarity=0.046 Sum_probs=132.8
Q ss_pred cEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCCh
Q 002209 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDE 729 (953)
Q Consensus 650 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~ 729 (953)
..++....-|.+ +.|.||++||.+.... .| . .....|+++||.|++ .|.+|+|.|
T Consensus 34 ~~l~y~~~G~~~-------~g~~vvllHG~~~~~~-----------~w---~-~~~~~L~~~g~rvia---~Dl~G~G~S 88 (310)
T 1b6g_A 34 LRAHYLDEGNSD-------AEDVFLCLHGEPTWSY-----------LY---R-KMIPVFAESGARVIA---PDFFGFGKS 88 (310)
T ss_dssp CEEEEEEEECTT-------CSCEEEECCCTTCCGG-----------GG---T-TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEeCCCC-------CCCEEEEECCCCCchh-----------hH---H-HHHHHHHhCCCeEEE---eCCCCCCCC
Confidence 788776654421 0367999999642211 12 1 234567888999999 555788888
Q ss_pred hhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC--CC------
Q 002209 730 EAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN--RT------ 797 (953)
Q Consensus 730 ~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d--~~------ 797 (953)
..+. .......+|+.+.++.|. -+++.|+||||||.+++.+|.++|++++++|++++... ..
T Consensus 89 ~~~~~~~~y~~~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~ 162 (310)
T 1b6g_A 89 DKPVDEEDYTFEFHRNFLLALIERLD------LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFS 162 (310)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHHT------CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHH
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHcC------CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchh
Confidence 5432 235677788888877762 35899999999999999999999999999999886431 10
Q ss_pred ----CCCcCc---------cccc----------chhh-hhHHHHHh------------------cC-----------ccc
Q 002209 798 ----LTPFGF---------QNED----------RTLW-EATSTYVE------------------MS-----------PFM 824 (953)
Q Consensus 798 ----~~~~~~---------~~~~----------~~~~-~~~~~~~~------------------~s-----------p~~ 824 (953)
.....+ .... .... +..+.|.. .. ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 1b6g_A 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAIS 242 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred hhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhh
Confidence 000000 0000 0000 00000000 00 012
Q ss_pred ccC-CCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEe--CCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 825 SAN-KLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVIL--PFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 825 ~~~-~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
.+. ++++|+|+++|++|..+| ..+.++.+.+... +++++ +++||... . ..+.+.+.+.+||.+
T Consensus 243 ~l~~~i~~P~Lvi~G~~D~~~~---~~~~~~~~~ip~~----~~~~i~~~~~GH~~~-~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 243 FWQNDWNGQTFMAIGMKDKLLG---PDVMYPMKALING----CPEPLEIADAGHFVQ-E-FGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHTCCSEEEEEEETTCSSSS---HHHHHHHHHHSTT----CCCCEEETTCCSCGG-G-GHHHHHHHHHHHHHH
T ss_pred hhhccccCceEEEeccCcchhh---hHHHHHHHhcccc----cceeeecCCcccchh-h-ChHHHHHHHHHHHhc
Confidence 345 899999999999999864 5667776666443 44444 99999874 4 778889999999875
No 280
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.49 E-value=9.3e-12 Score=141.98 Aligned_cols=177 Identities=10% Similarity=0.133 Sum_probs=104.4
Q ss_pred CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc-CceEEEeccCCCcccCCccccccccCccceeeccCC
Q 002209 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (953)
Q Consensus 332 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~-g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg 410 (953)
..+..++|+|||+.|+.. .+ +.|.+||+. ++....+.... |..+......+..++|+|||
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d-------------~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD-------------LRINLWHLEITDRSFNIVDIK-----PANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS-------------SEEEEEETTEEEEEEEEEECC-----CSSGGGCCCCEEEEEECSSC
T ss_pred cceEEEEEcCCCCEEEEe-CC-------------CeEEEEECCCCCceeeeeecc-----cccccccCcceEEEEECCCC
Confidence 678899999999998876 33 389999998 33332221110 11111233456789999999
Q ss_pred -CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC-----ceEEeeccc------------ccCCeeeccCCceEEE
Q 002209 411 -PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-----PEILHKLDL------------RYGGISWCDDSLALVY 472 (953)
Q Consensus 411 -~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~-----~~~l~~~~~------------~~~~~~~SpDg~~l~~ 472 (953)
+.++.. +..+.|.+||+ ..++ ...+..+.. .+..+.|+|||+.|+.
T Consensus 239 ~~~l~s~-------------~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 239 CNTFVYS-------------SSKGTIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp TTEEEEE-------------ETTSCEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred CcEEEEE-------------eCCCeEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE
Confidence 555444 34567899996 3333 244444433 6778999999999887
Q ss_pred EEecccCceEEEEEcCCCCCCCcEEeecCCCcccc------CCC---CCCCeEeccCCCEEEEEeeeccCCCcEEEEecC
Q 002209 473 ESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVY------SDP---GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (953)
Q Consensus 473 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~------~~~---~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~ 543 (953)
... + .+.++|+... .+............. ... ....+.|+|||++|+....+
T Consensus 303 ~~~-~----~v~iwd~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d------------- 363 (447)
T 3dw8_B 303 RDY-L----SVKVWDLNME-NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN------------- 363 (447)
T ss_dssp EES-S----EEEEEETTCC-SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-------------
T ss_pred eeC-C----eEEEEeCCCC-ccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC-------------
Confidence 654 2 4555565541 122222211110000 000 00016899999999766532
Q ss_pred CCCCCCCCCeEEEEECCCCceEEEecc
Q 002209 544 GATPEGNIPFLDLFDINTGSKERIWES 570 (953)
Q Consensus 544 ~~~~~~~~~~L~~~d~~~~~~~~l~~~ 570 (953)
..|++||+.+++...+...
T Consensus 364 --------g~v~iwd~~~~~~~~~~~~ 382 (447)
T 3dw8_B 364 --------NFFRMFDRNTKRDITLEAS 382 (447)
T ss_dssp --------TEEEEEETTTCCEEEEECC
T ss_pred --------CEEEEEEcCCCcceeeeec
Confidence 2499999999887665433
No 281
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.49 E-value=2.1e-13 Score=146.65 Aligned_cols=212 Identities=12% Similarity=0.062 Sum_probs=126.3
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC
Q 002209 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (953)
Q Consensus 644 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~ 723 (953)
+...+|.+++....- ..|+||++||..... ..| ......|++ ||.|+++ +.
T Consensus 17 ~~~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~-~~~v~~~---D~ 67 (306)
T 3r40_A 17 WINTSSGRIFARVGG----------DGPPLLLLHGFPQTH-----------VMW----HRVAPKLAE-RFKVIVA---DL 67 (306)
T ss_dssp EECCTTCCEEEEEEE----------CSSEEEEECCTTCCG-----------GGG----GGTHHHHHT-TSEEEEE---CC
T ss_pred EEEeCCEEEEEEEcC----------CCCeEEEECCCCCCH-----------HHH----HHHHHHhcc-CCeEEEe---CC
Confidence 334588888766642 147899999964211 112 123445555 9999994 45
Q ss_pred CCCCChhhhh-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 724 IGEGDEEAND-------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 724 ~G~G~~~~~~-------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|++++++|++++....
T Consensus 68 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 141 (306)
T 3r40_A 68 PGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQL------GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTY 141 (306)
T ss_dssp TTSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHH
T ss_pred CCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHHh------CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCc
Confidence 6777764432 23456666766666553 3458999999999999999999999999999999864210
Q ss_pred CC-------------------CC----------------------cC----cccccchh-------hhhH-------HHH
Q 002209 797 TL-------------------TP----------------------FG----FQNEDRTL-------WEAT-------STY 817 (953)
Q Consensus 797 ~~-------------------~~----------------------~~----~~~~~~~~-------~~~~-------~~~ 817 (953)
.. .. +. ........ +... ..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (306)
T 3r40_A 142 EYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDY 221 (306)
T ss_dssp HHHHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHH
Confidence 00 00 00 00000000 0000 000
Q ss_pred Hhc---------CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHH
Q 002209 818 VEM---------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (953)
Q Consensus 818 ~~~---------sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 888 (953)
... .....+.++++|+|+++|++|..++ .....+.++.+.. ..+++++ ++||.. ..++.+.+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~-~~gH~~-~~e~p~~~~~ 294 (306)
T 3r40_A 222 RAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQS--AATPLDVWRKWAS---DVQGAPI-ESGHFL-PEEAPDQTAE 294 (306)
T ss_dssp HHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC--------CHHHHHHHBS---SEEEEEE-SSCSCH-HHHSHHHHHH
T ss_pred HhcccccchhhhhhhhhccCCCcceEEEEecCCcccC--chhHHHHHHhhcC---CCeEEEe-cCCcCc-hhhChHHHHH
Confidence 000 0001357889999999999999987 6666655555432 4677777 579975 3566778888
Q ss_pred HHHHHHHHh
Q 002209 889 ETDRWLQKY 897 (953)
Q Consensus 889 ~i~~fl~~~ 897 (953)
.+.+||++.
T Consensus 295 ~i~~fl~~~ 303 (306)
T 3r40_A 295 ALVRFFSAA 303 (306)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhc
Confidence 899998763
No 282
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.49 E-value=1.5e-12 Score=142.68 Aligned_cols=267 Identities=6% Similarity=-0.009 Sum_probs=167.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+....+ +.|+||++...........+.. ...
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d---------------------------------~~v~iw~~~~~~~~~~~~~~~~--~~~ 57 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWD---------------------------------GSLTVYKFDIQAKNVDLLQSLR--YKH 57 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETT---------------------------------SEEEEEEEETTTTEEEEEEEEE--CSS
T ss_pred cEEEEEEcCCCCEEEEEcCC---------------------------------CeEEEEEeCCCCccccceeeee--cCC
Confidence 46688999999999988765 3679999854210001333333 234
Q ss_pred cccceEeccCCC-eEEEEEeeccccCCCCcceEEEEEC-CCCceeeccc--CCCccccccccceEEecCCeEEEEEecCC
Q 002209 190 KLNFVTWSQDGK-HLAFSIRIDAEDSSSSKLRVWVADV-DTGKARPLFQ--SPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (953)
Q Consensus 190 ~~~~~~wSPDG~-~laf~~~~~~~~~~~~~~~l~~~d~-~~g~~~~lt~--~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 265 (953)
.+..+.|+|||+ .|+... ....|+++++ ++++...+.. +... +..+.|+| ++.|+...
T Consensus 58 ~v~~~~~~~~~~~~l~~~~---------~dg~i~~wd~~~~~~~~~~~~~~~~~~-----v~~l~~~~-~~~l~s~~--- 119 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGT---------VQGEILKVDLIGSPSFQALTNNEANLG-----ICRICKYG-DDKLIAAS--- 119 (342)
T ss_dssp CEEEEEEEESSSEEEEEEE---------TTSCEEEECSSSSSSEEECBSCCCCSC-----EEEEEEET-TTEEEEEE---
T ss_pred ceEEEEECCCCCcEEEEEc---------CCCeEEEEEeccCCceEeccccCCCCc-----eEEEEeCC-CCEEEEEc---
Confidence 789999999999 888754 2568899999 8888776655 4332 77899999 88887661
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C---------Ccee-EeCCCCcc
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---------GTVK-EIGPPAVY 334 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~---------g~~~-~l~~~~~~ 334 (953)
..+.|.++|+ + ++.. .+.....+
T Consensus 120 ----------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 153 (342)
T 1yfq_A 120 ----------------------------------------------WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI 153 (342)
T ss_dssp ----------------------------------------------TTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred ----------------------------------------------CCCeEEEEcccccccccccccCCeeeEEeeCCce
Confidence 2235666666 4 4322 22222677
Q ss_pred cccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC-ceE--EEeccCCCcccCCccccccccCccceeecc-CC
Q 002209 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRS-DK 410 (953)
Q Consensus 335 ~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g-~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp-Dg 410 (953)
..++|+|++ |+....+ +.|.+||+.. ... ..... . ....+..++|+| ||
T Consensus 154 ~~~~~~~~~--l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~~-~-----------~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 154 FTMDTNSSR--LIVGMNN-------------SQVQWFRLPLCEDDNGTIEES-G-----------LKYQIRDVALLPKEQ 206 (342)
T ss_dssp EEEEECSSE--EEEEEST-------------TEEEEEESSCCTTCCCEEEEC-S-----------CSSCEEEEEECSGGG
T ss_pred EEEEecCCc--EEEEeCC-------------CeEEEEECCccccccceeeec-C-----------CCCceeEEEECCCCC
Confidence 889999998 6555533 3899999986 321 11111 0 112346799999 99
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEecCCCC-----CCCceEEeeccc---------ccCCeeeccCCceEEEEEec
Q 002209 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-----GEGPEILHKLDL---------RYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-----g~~~~~l~~~~~---------~~~~~~~SpDg~~l~~~~~~ 476 (953)
+.++.. +..+.+.+|+++. . ......+..+.. .+..+.|+|||+.|+....+
T Consensus 207 ~~l~~~-------------~~dg~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 272 (342)
T 1yfq_A 207 EGYACS-------------SIDGRVAVEFFDD-QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp CEEEEE-------------ETTSEEEEEECCT-TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT
T ss_pred CEEEEE-------------ecCCcEEEEEEcC-CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC
Confidence 876665 3455777777511 1 122334443332 66789999999998877644
Q ss_pred ccCceEEEEEcCCCCCCCcEEeecCC-CccccCCCCCCCeEeccCCCEEEEEeee
Q 002209 477 KTRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (953)
Q Consensus 477 ~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~SpDG~~l~~~~~~ 530 (953)
+ .|+++|+.++ +........ ...+.. +. |||++|+....+
T Consensus 273 g----~i~vwd~~~~--~~~~~~~~~h~~~v~~------~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 273 G----IISCWNLQTR--KKIKNFAKFNEDSVVK------IA--CSDNILCLATSD 313 (342)
T ss_dssp S----CEEEEETTTT--EEEEECCCCSSSEEEE------EE--ECSSEEEEEEEC
T ss_pred c----eEEEEcCccH--hHhhhhhcccCCCceE------ec--CCCCeEEEEecC
Confidence 3 4666777664 222222222 222222 33 999999888754
No 283
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.49 E-value=3.4e-12 Score=154.69 Aligned_cols=238 Identities=14% Similarity=0.093 Sum_probs=150.0
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCC-C-ceeeeecCC
Q 002209 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-G-QEIEIQGFP 186 (953)
Q Consensus 110 ~~~~~~~SPDG-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~-~-~~~~l~~~~ 186 (953)
.+..++|+||+ +.|+..+.+ +.|.||++..+... + ..+.+.++.
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D---------------------------------~~i~~W~~~~~~~~~~~~~~~~~~h~ 430 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRD---------------------------------KSIILWKLTKDDKAYGVAQRRLTGHS 430 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETT---------------------------------SEEEEEECCCSTTCSCEEEEEEECCS
T ss_pred eeEEEEecCCCCCEEEEEeCC---------------------------------CcEEEEEccCCCcccccccceecCCC
Confidence 35677888876 456666554 36799998543221 1 123454433
Q ss_pred CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCC
Q 002209 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (953)
Q Consensus 187 ~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 266 (953)
..+....|||||+.|+..+ ....|.++|+.+++..+........ +..++|+|||+.|+...
T Consensus 431 --~~v~~v~~s~~g~~l~sgs---------~Dg~v~vwd~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s---- 491 (694)
T 3dm0_A 431 --HFVEDVVLSSDGQFALSGS---------WDGELRLWDLAAGVSTRRFVGHTKD----VLSVAFSLDNRQIVSAS---- 491 (694)
T ss_dssp --SCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEE----
T ss_pred --CcEEEEEECCCCCEEEEEe---------CCCcEEEEECCCCcceeEEeCCCCC----EEEEEEeCCCCEEEEEe----
Confidence 4688999999999998755 2568899999888654433222222 77899999999988662
Q ss_pred CCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCC----C-CcccccccC
Q 002209 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP----P-AVYTSLDPS 340 (953)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~----~-~~~~~~~~S 340 (953)
..+.|.++|+ ......+.. . ..+..++|+
T Consensus 492 ---------------------------------------------~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 492 ---------------------------------------------RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp ---------------------------------------------TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred ---------------------------------------------CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 1134455565 333333321 1 457789999
Q ss_pred CCCc--EEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002209 341 PDEK--YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (953)
Q Consensus 341 pDG~--~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~ 417 (953)
|++. .|+..+.+ +.|.+||+.+.... .+..+. ..+..++|+|||+.++..
T Consensus 527 ~~~~~~~l~s~s~d-------------~~v~vwd~~~~~~~~~~~~h~-------------~~v~~v~~spdg~~l~sg- 579 (694)
T 3dm0_A 527 PNTLQPTIVSASWD-------------KTVKVWNLSNCKLRSTLAGHT-------------GYVSTVAVSPDGSLCASG- 579 (694)
T ss_dssp SCSSSCEEEEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSEEEEE-
T ss_pred CCCCcceEEEEeCC-------------CeEEEEECCCCcEEEEEcCCC-------------CCEEEEEEeCCCCEEEEE-
Confidence 9984 45555533 38999999865443 333321 345679999999876655
Q ss_pred EeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
+..+.|.+||+ ..++..........+..+.||||+..|+.... + .+.++|+.++
T Consensus 580 ------------~~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~----~i~iwd~~~~ 633 (694)
T 3dm0_A 580 ------------GKDGVVLLWDL---AEGKKLYSLEANSVIHALCFSPNRYWLCAATE-H----GIKIWDLESK 633 (694)
T ss_dssp ------------ETTSBCEEEET---TTTEEEECCBCSSCEEEEEECSSSSEEEEEET-T----EEEEEETTTT
T ss_pred ------------eCCCeEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEEEEcC-C----CEEEEECCCC
Confidence 44567889996 33332222233445667899999988776542 2 3555566553
No 284
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.49 E-value=4.8e-13 Score=143.10 Aligned_cols=170 Identities=16% Similarity=0.148 Sum_probs=110.7
Q ss_pred HcCcEEEEcCCCCCCCCCChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccE
Q 002209 710 ARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (953)
+++|.|++ +|.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.++.++|+++++
T Consensus 64 ~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~ 134 (289)
T 1u2e_A 64 EAGYRVIL---LDCPGWGKSDSVVNSGSRSDLNARILKSVVDQL------DIAKIHLLGNSMGGHSSVAFTLKWPERVGK 134 (289)
T ss_dssp HTTCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred hcCCeEEE---EcCCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHCHHhhhE
Confidence 45599999 4556788775432 22344455555554432 246899999999999999999999999999
Q ss_pred EEEcccCCCCC--CCCcC---------------------------ccccc--chh----hh----hHHHHH----h----
Q 002209 787 GIARSGAYNRT--LTPFG---------------------------FQNED--RTL----WE----ATSTYV----E---- 819 (953)
Q Consensus 787 ~v~~~~~~d~~--~~~~~---------------------------~~~~~--~~~----~~----~~~~~~----~---- 819 (953)
+|++++..... ..... +.... ... +. .+..+. .
T Consensus 135 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (289)
T 1u2e_A 135 LVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEAN 214 (289)
T ss_dssp EEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred EEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhc
Confidence 99988754210 00000 00000 000 00 001010 0
Q ss_pred ----cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 820 ----MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 820 ----~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
.+....+.++++|+|+++|++|..+| ++.++++.+.+.. .++++++++||... .+..+.+.+.+.+||.
T Consensus 215 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 215 PKQFPDFGPRLAEIKAQTLIVWGRNDRFVP--MDAGLRLLSGIAG----SELHIFRDCGHWAQ-WEHADAFNQLVLNFLA 287 (289)
T ss_dssp SCCSCCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHSTT----CEEEEESSCCSCHH-HHTHHHHHHHHHHHHT
T ss_pred cccccchhhHHhhcCCCeEEEeeCCCCccC--HHHHHHHHhhCCC----cEEEEeCCCCCchh-hcCHHHHHHHHHHHhc
Confidence 01223567789999999999999998 8888888777643 48899999999753 4556677778888874
No 285
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.49 E-value=4.4e-13 Score=142.05 Aligned_cols=199 Identities=10% Similarity=0.012 Sum_probs=126.2
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh---hhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~~ 746 (953)
.|.||++||.+... ..| . .....|+++||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 4 ~~~vvllHG~~~~~-----------~~w---~-~~~~~L~~~g~rVia---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 65 (273)
T 1xkl_A 4 GKHFVLVHGACHGG-----------WSW---Y-KLKPLLEAAGHKVTA---LDLAASGTDLRKIEELRTLYDYTLPLMEL 65 (273)
T ss_dssp CCEEEEECCTTCCG-----------GGG---T-THHHHHHHTTCEEEE---CCCTTSTTCCCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCc-----------chH---H-HHHHHHHhCCCEEEE---ecCCCCCCCccCcccccCHHHHHHHHHHH
Confidence 36799999963211 112 1 245567789999999 5667888874321 2355666666665
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC-C------------C---cC------cc
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-T------------P---FG------FQ 804 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~-~------------~---~~------~~ 804 (953)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++...... . . +. +.
T Consensus 66 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T 1xkl_A 66 MESL---SA--DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYG 140 (273)
T ss_dssp HHTS---CS--SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECS
T ss_pred HHHh---cc--CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhcc
Confidence 5443 21 25899999999999999999999999999999876421100 0 0 00 00
Q ss_pred ---c--c---cchhh-h-------hH--HHHH-h-cCccc----------cc---CCCCCcEEEEEeCCCCCCCCchHHH
Q 002209 805 ---N--E---DRTLW-E-------AT--STYV-E-MSPFM----------SA---NKLKKPILLVHGEEDNNSGTLTMQS 851 (953)
Q Consensus 805 ---~--~---~~~~~-~-------~~--~~~~-~-~sp~~----------~~---~~i~~P~Li~~G~~D~~v~~~~~~~ 851 (953)
. . ....+ . .. ..+. . ..+.. .. ...++|+|+++|++|..+| +..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~ 218 (273)
T 1xkl_A 141 SPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQ 218 (273)
T ss_dssp CTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHH
T ss_pred CCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCC--HHHH
Confidence 0 0 00000 0 00 0000 0 01100 00 1136799999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
+++.+.+.. .+++++|++||... .+..+.+.+.+.+|+.+..
T Consensus 219 ~~~~~~~p~----~~~~~i~~aGH~~~-~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 219 RWQIDNIGV----TEAIEIKGADHMAM-LCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp HHHHHHHCC----SEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHCC
T ss_pred HHHHHhCCC----CeEEEeCCCCCCch-hcCHHHHHHHHHHHHHHhc
Confidence 888777643 38899999999863 5667888899999998754
No 286
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.48 E-value=1.4e-13 Score=145.46 Aligned_cols=194 Identities=11% Similarity=0.132 Sum_probs=123.3
Q ss_pred cEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhh---hHHHHHHHHHHHH
Q 002209 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR---FVEQLVACAEAAV 747 (953)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~---~~~~~~~D~~~~~ 747 (953)
|.||++||.+... ..|. .....|++ +|.|++ +|.+|+|.+..... .....++|+.+.+
T Consensus 17 ~~vvllHG~~~~~-----------~~~~----~~~~~L~~-~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l 77 (269)
T 2xmz_A 17 QVLVFLHGFLSDS-----------RTYH----NHIEKFTD-NYHVIT---IDLPGHGEDQSSMDETWNFDYITTLLDRIL 77 (269)
T ss_dssp EEEEEECCTTCCG-----------GGGT----TTHHHHHT-TSEEEE---ECCTTSTTCCCCTTSCCCHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcH-----------HHHH----HHHHHHhh-cCeEEE---ecCCCCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 4599999964221 1121 22344554 599999 55568888755322 3566677777666
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC---------------------------
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--------------------------- 800 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~--------------------------- 800 (953)
+.+ +.+++.|+||||||.+|+.++.++|++++++|++++........
T Consensus 78 ~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T 2xmz_A 78 DKY------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVND 151 (269)
T ss_dssp GGG------TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHc------CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHH
Confidence 553 24689999999999999999999999999999998753321000
Q ss_pred cC----cccc---cc----hhhh-----hHH----HHHh------cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHH
Q 002209 801 FG----FQNE---DR----TLWE-----ATS----TYVE------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (953)
Q Consensus 801 ~~----~~~~---~~----~~~~-----~~~----~~~~------~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~ 854 (953)
+. +... .. ..+. ... .+.. .+....+.++++|+|+++|++|..++ .... ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~-~~ 228 (269)
T 2xmz_A 152 WEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAK-KM 228 (269)
T ss_dssp HTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHH--HHHH-HH
T ss_pred HHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccC--HHHH-HH
Confidence 00 0000 00 0000 000 0100 01123466789999999999999876 5543 34
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
.+.+ ...++++++++||... .+..+.+.+.+.+||.+.
T Consensus 229 ~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 229 ANLI----PNSKCKLISATGHTIH-VEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHS----TTEEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred HhhC----CCcEEEEeCCCCCChh-hcCHHHHHHHHHHHHHHh
Confidence 4433 2479999999999864 456778888999999764
No 287
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.48 E-value=4.7e-13 Score=133.34 Aligned_cols=127 Identities=14% Similarity=0.105 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHH
Q 002209 737 EQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATST 816 (953)
Q Consensus 737 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 816 (953)
...++|+.++++.+ + +++.++||||||.+++.++.++|++++++|+++|...... .+
T Consensus 59 ~~~~~~~~~~~~~~------~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~~------------- 115 (191)
T 3bdv_A 59 DRWVLAIRRELSVC------T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF---EI------------- 115 (191)
T ss_dssp HHHHHHHHHHHHTC------S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG---TC-------------
T ss_pred HHHHHHHHHHHHhc------C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc---cC-------------
Confidence 44555555554432 3 6899999999999999999999999999999998643210 00
Q ss_pred HHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc--cHHHHHHHHHHHH
Q 002209 817 YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE--SIMHVLWETDRWL 894 (953)
Q Consensus 817 ~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~i~~fl 894 (953)
.+...+.++++|+|+++|++|..+| ++.++++.+.+ ..++++++++||...... ...+.++.+.+||
T Consensus 116 ----~~~~~~~~~~~P~lii~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 184 (191)
T 3bdv_A 116 ----DDRIQASPLSVPTLTFASHNDPLMS--FTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFS 184 (191)
T ss_dssp ----TTTSCSSCCSSCEEEEECSSBTTBC--HHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHH
T ss_pred ----ccccccccCCCCEEEEecCCCCcCC--HHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHH
Confidence 0113456788999999999999998 89888888876 258999999999874321 3344557788888
Q ss_pred HHh
Q 002209 895 QKY 897 (953)
Q Consensus 895 ~~~ 897 (953)
++.
T Consensus 185 ~~~ 187 (191)
T 3bdv_A 185 EIL 187 (191)
T ss_dssp HTT
T ss_pred HHh
Confidence 764
No 288
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.48 E-value=4.7e-12 Score=150.96 Aligned_cols=176 Identities=9% Similarity=0.003 Sum_probs=109.8
Q ss_pred CCCceecC--CCCEEEEEecCCCCCccccccc-----------------cceeceEEecCCCCCCcceeee----eceEE
Q 002209 111 LPALSFSP--QRDKILFLKRRALPPLEELARP-----------------EEKLAGLRIDGKCNTRSRMSFY----TGIGI 167 (953)
Q Consensus 111 ~~~~~~SP--DG~~la~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~----~~i~i 167 (953)
+..++||| ||++||....++...++++... ......+.+++++......... ..|++
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEE
Confidence 67889999 9999999887755555655321 1123345666665433222221 35677
Q ss_pred EEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccccccc
Q 002209 168 HQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFD 247 (953)
Q Consensus 168 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~ 247 (953)
|+. + .....+.. ....+....|+|||+.++++.. ....|.++|+.+++.......... ....+.
T Consensus 147 ~d~---~--~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~--------~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~ 210 (615)
T 1pgu_A 147 WDS---G--NSLGEVSG--HSQRINACHLKQSRPMRSMTVG--------DDGSVVFYQGPPFKFSASDRTHHK-QGSFVR 210 (615)
T ss_dssp TTT---C--CEEEECCS--CSSCEEEEEECSSSSCEEEEEE--------TTTEEEEEETTTBEEEEEECSSSC-TTCCEE
T ss_pred EEC---C--Ccceeeec--CCccEEEEEECCCCCcEEEEEe--------CCCcEEEEeCCCcceeeeecccCC-CCceEE
Confidence 663 1 23333332 2247889999999985444332 356888889888765543332222 000277
Q ss_pred ceEEecC-CeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce
Q 002209 248 NFVWVNN-STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV 325 (953)
Q Consensus 248 ~~~wspD-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~ 325 (953)
.++|+|| |+.|+... ..+.|.++|+ +++.
T Consensus 211 ~~~~~~~~~~~l~~~~-------------------------------------------------~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVG-------------------------------------------------SDRKISCFDGKSGEF 241 (615)
T ss_dssp EEEECSTTCCEEEEEE-------------------------------------------------TTCCEEEEETTTCCE
T ss_pred EEEECCCCCCEEEEEe-------------------------------------------------CCCeEEEEECCCCCE
Confidence 8999999 99888661 2246778888 6654
Q ss_pred e-Ee-C---CC-CcccccccCCCCcEEEEEEec
Q 002209 326 K-EI-G---PP-AVYTSLDPSPDEKYILISSIH 352 (953)
Q Consensus 326 ~-~l-~---~~-~~~~~~~~SpDG~~l~~~~~~ 352 (953)
. .+ . .. ..+..+.|+ ||++|+..+.+
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred eEEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence 3 34 1 33 778889999 99999888744
No 289
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.48 E-value=1.9e-13 Score=146.29 Aligned_cols=209 Identities=8% Similarity=-0.073 Sum_probs=132.7
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (953)
..+|.+++...+- +.|+||++||.+.... .|.. ....|+ .+|.|+++| .+|
T Consensus 14 ~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~~-----------~~~~----~~~~l~-~~~~vi~~D---~~G 64 (297)
T 2qvb_A 14 EIAGKRMAYIDEG----------KGDAIVFQHGNPTSSY-----------LWRN----IMPHLE-GLGRLVACD---LIG 64 (297)
T ss_dssp EETTEEEEEEEES----------SSSEEEEECCTTCCGG-----------GGTT----TGGGGT-TSSEEEEEC---CTT
T ss_pred EECCEEEEEEecC----------CCCeEEEECCCCchHH-----------HHHH----HHHHHh-hcCeEEEEc---CCC
Confidence 3478888766552 1478999999642211 1211 122333 459999954 467
Q ss_pred CCChhhhh------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCC
Q 002209 726 EGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (953)
Q Consensus 726 ~G~~~~~~------~~~~~~~~D~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~ 798 (953)
+|.+.... ......++|+.++++.+ +. +++.++||||||.+++.++.++|++++++|++++......
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 138 (297)
T 2qvb_A 65 MGASDKLSPSGPDRYSYGEQRDFLFALWDAL------DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMT 138 (297)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBC
T ss_pred CCCCCCCCCccccCcCHHHHHHHHHHHHHHc------CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCcc
Confidence 77764432 23566677777776654 23 6899999999999999999999999999999998653110
Q ss_pred CC-cC--c---------c----------------------cccc---------------hhhhhH-HHHHhc--------
Q 002209 799 TP-FG--F---------Q----------------------NEDR---------------TLWEAT-STYVEM-------- 820 (953)
Q Consensus 799 ~~-~~--~---------~----------------------~~~~---------------~~~~~~-~~~~~~-------- 820 (953)
.. .. . . .... ...... ..+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2qvb_A 139 WADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAE 218 (297)
T ss_dssp GGGSCGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHH
T ss_pred CCCCChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchh
Confidence 00 00 0 0 0000 000000 000000
Q ss_pred ------CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 821 ------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 821 ------sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
+....+.++++|+|+++|++|..+| ++.+.++.+.+ .. +++++ ++||... .++...+.+.+.+||
T Consensus 219 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~~~p~~~~~~i~~fl 289 (297)
T 2qvb_A 219 VVALVNEYRSWLEETDMPKLFINAEPGAIIT--GRIRDYVRSWP----NQ-TEITV-PGVHFVQ-EDSPEEIGAAIAQFV 289 (297)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHTSS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccccccEEEEecCCCCcCC--HHHHHHHHHHc----CC-eEEEe-cCccchh-hhCHHHHHHHHHHHH
Confidence 1123345689999999999999998 77776665544 23 78888 9999864 566788899999999
Q ss_pred HHhc
Q 002209 895 QKYC 898 (953)
Q Consensus 895 ~~~l 898 (953)
++..
T Consensus 290 ~~~~ 293 (297)
T 2qvb_A 290 RRLR 293 (297)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 290
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.2e-11 Score=141.49 Aligned_cols=214 Identities=7% Similarity=-0.011 Sum_probs=124.0
Q ss_pred CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEE--eccCCCcccCCccccccccCccceeeccC
Q 002209 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE--LCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (953)
Q Consensus 332 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~--l~~~~~~~~~p~~~~~~~~~~~~~~wspD 409 (953)
..+..++|||||++|++...+ +.+++|++..+.... +.. +.+....+..++|+||
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~-------------g~v~~~~~~~~~~~~~~~~~----------~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKF-------------GDVYSIDINSIPEEKFTQEP----------ILGHVSMLTDVHLIKD 206 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTSCCCSSCCCCC----------SEECSSCEEEEEEEEC
T ss_pred CCceEEEEcCCCCEEEEEeCC-------------CcEEEEecCCccccccccee----------eecccCceEEEEEcCC
Confidence 667889999999999988733 379999987543221 001 0112234567999999
Q ss_pred ---CCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE-EeecccccCCeeeccCCceEEEEEecccCceEEEE
Q 002209 410 ---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWV 485 (953)
Q Consensus 410 ---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~-l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~ 485 (953)
|+.|+.. +..+.|++|++ .++..... +..+...+..+.|+ ||+.|+..+.++ .|.+
T Consensus 207 ~~~~~~l~s~-------------~~d~~i~vwd~--~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~----~v~v 266 (450)
T 2vdu_B 207 SDGHQFIITS-------------DRDEHIKISHY--PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD----KIFA 266 (450)
T ss_dssp TTSCEEEEEE-------------ETTSCEEEEEE--SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSS----EEEE
T ss_pred CCCCcEEEEE-------------cCCCcEEEEEC--CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCC----eEEE
Confidence 7766554 34567889996 23333333 33556677889999 999998876443 5667
Q ss_pred EcCCCCCCCcEEeecCCC--ccc-----------------cCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCC
Q 002209 486 ISPGSKDVAPRILFDRSS--EDV-----------------YSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (953)
Q Consensus 486 ~d~~~~~~~~~~~~~~~~--~~~-----------------~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (953)
+|+.++ +......... ... .....--.+.|+|||++|+.....
T Consensus 267 wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~---------------- 328 (450)
T 2vdu_B 267 WDWKTG--KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA---------------- 328 (450)
T ss_dssp EETTTC--CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT----------------
T ss_pred EECCCC--cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC----------------
Confidence 777765 2222221100 000 000000016789999988877611
Q ss_pred CCCCCCeEEEEEC--CCC-ceEEE--eccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCc------eEEEEE
Q 002209 547 PEGNIPFLDLFDI--NTG-SKERI--WESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENT------QYYIQS 615 (953)
Q Consensus 547 ~~~~~~~L~~~d~--~~~-~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~------~l~~~~ 615 (953)
...|++|++ .++ +...+ ....+. +. ..+|+++ .+++...+...|. .+|.++
T Consensus 329 ----d~~i~iw~~~~~~~~~l~~~~~~~~~~~-----v~-------~~~~~~~--~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 329 ----TKCIIILEMSEKQKGDLALKQIITFPYN-----VI-------SLSAHND--EFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp ----CSEEEEEEECSSSTTCEEEEEEEECSSC-----EE-------EEEEETT--EEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred ----CCeEEEEEeccCCCCceeeccEeccCCc-----eE-------EEEecCC--cEEEEEecccCCCCCCcceEEEEEE
Confidence 124888888 443 22222 222211 11 1356663 4666666655554 788888
Q ss_pred CCCCCeeEEe
Q 002209 616 WPDKKSCQIT 625 (953)
Q Consensus 616 ~~~g~~~~Lt 625 (953)
..+++.+ ++
T Consensus 391 ~~~~~~~-~~ 399 (450)
T 2vdu_B 391 LNENSFV-VN 399 (450)
T ss_dssp TTTTEEE-EC
T ss_pred cCCCeEE-Ec
Confidence 7777654 56
No 291
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.48 E-value=8e-13 Score=141.94 Aligned_cols=208 Identities=12% Similarity=0.061 Sum_probs=130.7
Q ss_pred cEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCCh
Q 002209 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDE 729 (953)
Q Consensus 650 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~ 729 (953)
.+++....-|.+ ..|.||++||.+... ..| . .....|+++||.|++ .|.+|+|.|
T Consensus 33 ~~l~y~~~G~~~-------~g~~vvllHG~~~~~-----------~~w---~-~~~~~L~~~g~rvia---~Dl~G~G~S 87 (297)
T 2xt0_A 33 LRMHYVDEGPRD-------AEHTFLCLHGEPSWS-----------FLY---R-KMLPVFTAAGGRVVA---PDLFGFGRS 87 (297)
T ss_dssp CCEEEEEESCTT-------CSCEEEEECCTTCCG-----------GGG---T-TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEccCCC-------CCCeEEEECCCCCcc-----------eeH---H-HHHHHHHhCCcEEEE---eCCCCCCCC
Confidence 778776654321 136799999964221 112 1 234567888999999 555788887
Q ss_pred hhhh----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCC-CcCc-
Q 002209 730 EAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-PFGF- 803 (953)
Q Consensus 730 ~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~-~~~~- 803 (953)
..+. .......+|+.+.++.+. .+++.|+||||||.+++.+|.++|++++++|++++....... ...+
T Consensus 88 ~~~~~~~~~~~~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 161 (297)
T 2xt0_A 88 DKPTDDAVYTFGFHRRSLLAFLDALQ------LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFE 161 (297)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHHT------CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHhC------CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHH
Confidence 5432 235677788877777652 358999999999999999999999999999998874311100 0000
Q ss_pred ---------cccc---------chh-hhhHHHHH-------------hc---C--------------cccccC-CCCCcE
Q 002209 804 ---------QNED---------RTL-WEATSTYV-------------EM---S--------------PFMSAN-KLKKPI 833 (953)
Q Consensus 804 ---------~~~~---------~~~-~~~~~~~~-------------~~---s--------------p~~~~~-~i~~P~ 833 (953)
.... ... .+....|. .+ . ....+. ++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 241 (297)
T 2xt0_A 162 SWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPT 241 (297)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCE
T ss_pred HHHHHhhcccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCe
Confidence 0000 000 00000010 00 0 011235 889999
Q ss_pred EEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 834 Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
|+++|++|..+| ..+.++.+.+... ....+.++++||... . ..+.+.+.+.+||.
T Consensus 242 Lvi~G~~D~~~~---~~~~~~~~~~p~~--~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 242 FMAVGAQDPVLG---PEVMGMLRQAIRG--CPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp EEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred EEEEeCCCcccC---hHHHHHHHhCCCC--eeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 999999999864 5567777666433 233344799999875 4 66778888888864
No 292
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.47 E-value=5.1e-13 Score=140.72 Aligned_cols=197 Identities=13% Similarity=0.074 Sum_probs=120.9
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh--hhHHHHHHHHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~~ 746 (953)
+.|+||++||+... ...| ......| +.+|.|+.+| .+|+|.+.... ......++|+.++
T Consensus 19 ~~~~vv~~HG~~~~-----------~~~~----~~~~~~l-~~~~~v~~~d---~~G~G~s~~~~~~~~~~~~~~~~~~~ 79 (267)
T 3fla_A 19 ARARLVCLPHAGGS-----------ASFF----FPLAKAL-APAVEVLAVQ---YPGRQDRRHEPPVDSIGGLTNRLLEV 79 (267)
T ss_dssp CSEEEEEECCTTCC-----------GGGG----HHHHHHH-TTTEEEEEEC---CTTSGGGTTSCCCCSHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCC-----------chhH----HHHHHHh-ccCcEEEEec---CCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 47899999996311 0111 1233344 4459999954 46777764322 2345556665555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----ccEEEEcccCCCCCCCCcCccccc-----------c---
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQNED-----------R--- 808 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~d~~~~~~~~~~~~-----------~--- 808 (953)
++.+ +.+++.|+||||||.+++.++.++|++ ++++++.++............... .
T Consensus 80 l~~~------~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
T 3fla_A 80 LRPF------GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSD 153 (267)
T ss_dssp TGGG------TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHH
T ss_pred HHhc------CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcc
Confidence 5443 346899999999999999999999986 888888876533211100000000 0
Q ss_pred -hhhh--------------hHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002209 809 -TLWE--------------ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (953)
Q Consensus 809 -~~~~--------------~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 873 (953)
.... ....+..+.+... .++++|+|+++|++|..+| +....++.+.+.. +++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~g- 226 (267)
T 3fla_A 154 AAMLADPELLAMVLPAIRSDYRAVETYRHEPG-RRVDCPVTVFTGDHDPRVS--VGEARAWEEHTTG---PADLRVLPG- 226 (267)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHCCCCTT-CCBSSCEEEEEETTCTTCC--HHHHHGGGGGBSS---CEEEEEESS-
T ss_pred hhhccCHHHHHHHHHHHHHHHHhhhccccccc-CcCCCCEEEEecCCCCCCC--HHHHHHHHHhcCC---CceEEEecC-
Confidence 0000 0011112222111 5788999999999999998 8777776655533 489999999
Q ss_pred CccCCCcccHHHHHHHHHHHHHHhc
Q 002209 874 SHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 874 ~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
||... .++...+.+.+.+||++..
T Consensus 227 gH~~~-~~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 227 GHFFL-VDQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp STTHH-HHTHHHHHHHHHHHTC---
T ss_pred Cceee-ccCHHHHHHHHHHHhcccc
Confidence 99864 4556677777788877654
No 293
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.47 E-value=3.6e-12 Score=140.41 Aligned_cols=302 Identities=8% Similarity=0.000 Sum_probs=173.1
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC---CeEEEEEecCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN---STLLVCTIPLL 265 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD---g~~l~~~~~~~ 265 (953)
..+....|+|||+.++.+... ..+...|.++++++++...+...+. ...+..++|+|+ |+.|+...
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~-----~~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~--- 87 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNF-----ARGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGD--- 87 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC-------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEE---
T ss_pred CceEEEEEcCCCceEEEecCc-----cCCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEec---
Confidence 468899999999888876531 1125678888888887654432111 112778999999 68887661
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--eeEeCCC-Cccccc----
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP-AVYTSL---- 337 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--~~~l~~~-~~~~~~---- 337 (953)
..+.|.++++ +++ ...+... ..+..+
T Consensus 88 ----------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 88 ----------------------------------------------FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp ----------------------------------------------TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred ----------------------------------------------CCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 2245667777 543 4444433 445555
Q ss_pred --ccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCcccee----eccC
Q 002209 338 --DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSIN----WRSD 409 (953)
Q Consensus 338 --~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~----wspD 409 (953)
+|||||+.|+..+.+ +.|.+||+..+. ...+........ ..+..+. |+||
T Consensus 122 ~~~~s~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRD-------------GTVKVWDPRQKDDPVANMEPVQGENK---------RDCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETT-------------SCEEEECTTSCSSCSEEECCCTTSCC---------CCEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCC-------------CeEEEEeCCCCCCcceeccccCCCCC---------CceEEEEEEeccCCC
Confidence 789999999888744 389999998543 333433222110 1223444 8999
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeecc---CCceEEEEEecccCceEEEEE
Q 002209 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCD---DSLALVYESWYKTRRTRTWVI 486 (953)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~Sp---Dg~~l~~~~~~~~~~~~l~~~ 486 (953)
++.++.. +..+.+.+||+ ..++..........+..+.|+| +++.|+....++ .+.++
T Consensus 180 ~~~l~~~-------------~~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg----~i~i~ 239 (357)
T 3i2n_A 180 ERVVCAG-------------YDNGDIKLFDL---RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEG----KFHVF 239 (357)
T ss_dssp CCEEEEE-------------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTT----EEEEE
T ss_pred CCEEEEE-------------ccCCeEEEEEC---ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCC----eEEEE
Confidence 9877665 44568999996 5455545556667788899999 999988876543 34444
Q ss_pred cCCCCCCCcEEe---ecCCCccccCCCCCCCeEeccCCC-EEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002209 487 SPGSKDVAPRIL---FDRSSEDVYSDPGSPMMRRTSTGT-YVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (953)
Q Consensus 487 d~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~SpDG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~ 562 (953)
++.++....... .......+.. +.|+|+|+ +++....+ ..+++||+..+
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~~l~~~~~d---------------------g~i~iwd~~~~ 292 (357)
T 3i2n_A 240 DMRTQHPTKGFASVSEKAHKSTVWQ------VRHLPQNRELFLTAGGA---------------------GGLHLWKYEYP 292 (357)
T ss_dssp EEEEEETTTEEEEEEEECCSSCEEE------EEEETTEEEEEEEEETT---------------------SEEEEEEEECC
T ss_pred eCcCCCcccceeeeccCCCcCCEEE------EEECCCCCcEEEEEeCC---------------------CcEEEeecCCC
Confidence 443321111111 1122223333 78999998 45544421 24888888765
Q ss_pred ceEEEeccCcccc-----eeeeEeeccC---CccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002209 563 SKERIWESDKEKY-----YETTVALMSD---QTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (953)
Q Consensus 563 ~~~~l~~~~~~~~-----~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g 619 (953)
........++... +..+..+... -...+|+|+++.++++.+.. ..++++++.+.
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d---~~i~iw~~~~~ 354 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD---QTVRVLIVTKL 354 (357)
T ss_dssp SCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT---SEEEEEEECC-
T ss_pred cccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC---CcEEEEECCCc
Confidence 5443222222100 0000000000 01257899999887655543 35778876554
No 294
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.47 E-value=2.3e-12 Score=142.86 Aligned_cols=226 Identities=13% Similarity=0.095 Sum_probs=146.1
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc---eeecccCCCccccccccceEEecCCeEEEEEecCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK---ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~---~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 265 (953)
..+....|+|||+.|++.. ....|+++++++++ ...+..+.. .+..++|+|||+.|+...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~--- 71 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICP---------NNHEVHIYEKSGNKWVQVHELKEHNG-----QVTGVDWAPDSNRIVTCG--- 71 (372)
T ss_dssp SCCCEEEECTTSSEEEEEC---------SSSEEEEEEEETTEEEEEEEEECCSS-----CEEEEEEETTTTEEEEEE---
T ss_pred CCeEEEEECCCCCEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCCCC-----cccEEEEeCCCCEEEEEc---
Confidence 3688999999999998853 25678888888875 333332222 277899999999998761
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee---EeCCC-CcccccccC
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK---EIGPP-AVYTSLDPS 340 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~---~l~~~-~~~~~~~~S 340 (953)
..+.|.++++ +++.. .+... ..+..++|+
T Consensus 72 ----------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 72 ----------------------------------------------TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp ----------------------------------------------TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred ----------------------------------------------CCCeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 1245667777 66422 22333 678899999
Q ss_pred CCCcEEEEEEecCCccccccCCCCCcceEEEeccCce----EEEeccCCCcccCCccccccccCccceeeccCCCCceEE
Q 002209 341 PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYW 416 (953)
Q Consensus 341 pDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~----~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~ 416 (953)
|||+.|+....+ +.|.+||++.+. .+.+.. .....+..++|+||++.++..
T Consensus 106 ~~~~~l~~~~~d-------------~~v~i~d~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 106 PNEKKFAVGSGS-------------RVISICYFEQENDWWVCKHIKK------------PIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp TTSSEEEEEETT-------------SSEEEEEEETTTTEEEEEEECT------------TCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEecCCCcceeeeeeec------------ccCCCeeEEEEcCCCCEEEEE
Confidence 999999988744 389999998544 122211 111345679999999876655
Q ss_pred EEeccCCCcccccccCCeEEEEecCC----------------CCCCCceEEeecccccCCeeeccCCceEEEEEecccCc
Q 002209 417 AETQDGGDAKVEVTPRDIIYTQQAEP----------------VQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (953)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~d~~~----------------~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 480 (953)
+..+.+.+||+.. ..+.....+..+...+..+.|+|||+.|+....++
T Consensus 161 -------------~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--- 224 (372)
T 1k8k_C 161 -------------SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS--- 224 (372)
T ss_dssp -------------ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT---
T ss_pred -------------cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC---
Confidence 3455788888410 01122223344556677899999999888876443
Q ss_pred eEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEE
Q 002209 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAK 527 (953)
Q Consensus 481 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~ 527 (953)
.+.++|..++ +...........+.. +.|+|||++++..
T Consensus 225 -~i~i~d~~~~--~~~~~~~~~~~~v~~------~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 225 -TVCLADADKK--MAVATLASETLPLLA------VTFITESSLVAAG 262 (372)
T ss_dssp -EEEEEEGGGT--TEEEEEECSSCCEEE------EEEEETTEEEEEE
T ss_pred -EEEEEECCCC--ceeEEEccCCCCeEE------EEEecCCCEEEEE
Confidence 4666666654 333333333222332 7899999877655
No 295
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.47 E-value=3.4e-13 Score=141.47 Aligned_cols=197 Identities=9% Similarity=-0.037 Sum_probs=124.7
Q ss_pred cEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhh--h-hhHHHHHHHHHHHH
Q 002209 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--D-RFVEQLVACAEAAV 747 (953)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~--~-~~~~~~~~D~~~~~ 747 (953)
|.||++||..... ..| . .....|+++||.|++ .|.+|+|.+... . ..+....+|+.+.+
T Consensus 4 ~~vvllHG~~~~~-----------~~w---~-~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l 65 (257)
T 3c6x_A 4 AHFVLIHTICHGA-----------WIW---H-KLKPLLEALGHKVTA---LDLAASGVDPRQIEEIGSFDEYSEPLLTFL 65 (257)
T ss_dssp CEEEEECCTTCCG-----------GGG---T-THHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHTHHHHHHH
T ss_pred CcEEEEcCCccCc-----------CCH---H-HHHHHHHhCCCEEEE---eCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 5789999953211 112 1 345567789999999 555688887432 1 23566667766665
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC-CCCCc-----------Ccccc---------
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR-TLTPF-----------GFQNE--------- 806 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~-~~~~~-----------~~~~~--------- 806 (953)
+.+ + ..+++.|+||||||.+++.++.++|++++++|++++.... ..... .+...
T Consensus 66 ~~l---~--~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 3c6x_A 66 EAL---P--PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDG 140 (257)
T ss_dssp HTS---C--TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETT
T ss_pred Hhc---c--ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCC
Confidence 543 1 1258999999999999999999999999999988764210 00000 00000
Q ss_pred -------cch-h-----h-----hhHHHHH-hcCccc----------cc--CC-CCCcEEEEEeCCCCCCCCchHHHHHH
Q 002209 807 -------DRT-L-----W-----EATSTYV-EMSPFM----------SA--NK-LKKPILLVHGEEDNNSGTLTMQSDRF 854 (953)
Q Consensus 807 -------~~~-~-----~-----~~~~~~~-~~sp~~----------~~--~~-i~~P~Li~~G~~D~~v~~~~~~~~~~ 854 (953)
... . + +...... ...+.. .. .. .++|+|+++|++|..+| +..++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~~~~ 218 (257)
T 3c6x_A 141 KEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLWQ 218 (257)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHHH
T ss_pred CccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccC--HHHHHHH
Confidence 000 0 0 0000000 001100 00 11 26799999999999998 8888877
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 855 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
.+.+.. .+++++|++||.. ..+..+.+.+.+.+|++++
T Consensus 219 ~~~~~~----~~~~~i~~~gH~~-~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 219 IENYKP----DKVYKVEGGDHKL-QLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHSCC----SEEEECCSCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred HHHCCC----CeEEEeCCCCCCc-ccCCHHHHHHHHHHHHHhc
Confidence 776643 4889999999986 3667788889999998764
No 296
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.46 E-value=5.6e-13 Score=145.54 Aligned_cols=198 Identities=12% Similarity=0.084 Sum_probs=120.7
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCC-CCCCCCChhhhhhhHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT-PIIGEGDEEANDRFVEQLVACAEAAVE 748 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~-~~~G~G~~~~~~~~~~~~~~D~~~~~~ 748 (953)
.|+||++||.... ...+..+ ......| ++||.|+.+|.+ +.+|+|.+.. .....|+.++++
T Consensus 38 ~~~vvllHG~~~~-----------~~~~~~~-~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~-----~~~~~d~~~~~~ 99 (335)
T 2q0x_A 38 RRCVLWVGGQTES-----------LLSFDYF-TNLAEEL-QGDWAFVQVEVPSGKIGSGPQDH-----AHDAEDVDDLIG 99 (335)
T ss_dssp SSEEEEECCTTCC-----------TTCSTTH-HHHHHHH-TTTCEEEEECCGGGBTTSCSCCH-----HHHHHHHHHHHH
T ss_pred CcEEEEECCCCcc-----------ccchhHH-HHHHHHH-HCCcEEEEEeccCCCCCCCCccc-----cCcHHHHHHHHH
Confidence 5789999994210 0111110 1233344 789999996542 5578888732 345678888888
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHH--hCCCcccEEEEcccCCCCCCCCcCc---c-------------------
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLA--HAPHLFCCGIARSGAYNRTLTPFGF---Q------------------- 804 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~--~~p~~~~a~v~~~~~~d~~~~~~~~---~------------------- 804 (953)
++.+. .+.+++.|+||||||.+++.++. .+|++++++|+.++..+.....+.. .
T Consensus 100 ~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (335)
T 2q0x_A 100 ILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSL 177 (335)
T ss_dssp HHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTCGG
T ss_pred HHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccCccccc
Confidence 88764 34579999999999999999999 4789999999998865422000000 0
Q ss_pred ------cc--cchhhh------hHHH-HH------hcCcccccCCCCCcEEEEEeCCCCCCCCchHHH-HHHHHHHHhCC
Q 002209 805 ------NE--DRTLWE------ATST-YV------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHG 862 (953)
Q Consensus 805 ------~~--~~~~~~------~~~~-~~------~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~-~~~~~~l~~~g 862 (953)
.. ....+. .... +. ..+....+.+|++|+||+||++|..+| +... ..+.+.+...-
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp--~~~~~~~~~~~l~~~~ 255 (335)
T 2q0x_A 178 AMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKP--SDEEVGTVLEGVRDHT 255 (335)
T ss_dssp GGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCC--CHHHHHHHHHHHHHHS
T ss_pred cchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCC--hhhhHHHHHHHHHHhc
Confidence 00 000000 0000 00 001123467789999999999999998 7542 23333333221
Q ss_pred CcEE--------E-----EEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 863 ALCR--------L-----VILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 863 ~~~~--------~-----~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
...+ + +++|++|| +..+.+.+||.+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 256 GCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADED 295 (335)
T ss_dssp SSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHHH
T ss_pred CccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhhh
Confidence 1122 5 78999999 23788899998764
No 297
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.46 E-value=4.8e-12 Score=135.87 Aligned_cols=244 Identities=12% Similarity=0.118 Sum_probs=149.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++||..+.+ +.|.||++.. +.......+.++ ..
T Consensus 11 ~V~~~~~s~~g~~las~s~D---------------------------------~~v~iw~~~~-~~~~~~~~l~gH--~~ 54 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSD---------------------------------KTIKIFEVEG-ETHKLIDTLTGH--EG 54 (297)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEEBCS-SCBCCCEEECCC--SS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CEEEEEecCC-CCcEEEEEEccc--cC
Confidence 46678999999999998875 3679999843 111122334333 24
Q ss_pred cccceEeccC--CCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC--CeEEEEEecCC
Q 002209 190 KLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPLL 265 (953)
Q Consensus 190 ~~~~~~wSPD--G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~ 265 (953)
.+....|+|+ |+.|+..+ ....|.++|+++++...+..... ....+..++|+|+ |+.|+...
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s---------~D~~v~iWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s--- 120 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCS---------YDGKVMIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPMLLVAS--- 120 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEE---------TTTEEEEEEBSSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEE---
T ss_pred CeEEEEecCCCcCCEEEEEc---------CCCEEEEEEcCCCceEEEEEeec--CCCceeEEEeCcCCCCcEEEEEE---
Confidence 6888999874 88887755 25678888888775332221111 1112778999998 77877651
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc---eeEeCCC-CcccccccC
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDPS 340 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~S 340 (953)
..+.|.++++ ++. ...+... ..+..++|+
T Consensus 121 ----------------------------------------------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 121 ----------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp ----------------------------------------------TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred ----------------------------------------------CCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence 2245666676 442 2223333 667788999
Q ss_pred CC-------------CcEEEEEEecCCccccccCCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCcccee
Q 002209 341 PD-------------EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (953)
Q Consensus 341 pD-------------G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (953)
|+ ++.|+..+.+. .|.+||+..+. ...+.... +....+..++
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~-------------~v~lwd~~~~~~~~~~~~~l~----------~H~~~V~~v~ 211 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADN-------------LVKIWKYNSDAQTYVLESTLE----------GHSDWVRDVA 211 (297)
T ss_dssp CCC------------CCEEEEEETTS-------------CEEEEEEETTTTEEEEEEEEC----------CCSSCEEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCC-------------cEEEEEEcCCCceEEEEEEec----------CCCCceEEEE
Confidence 97 56777766443 89999997532 11111111 1223457899
Q ss_pred eccCC---CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC---ce-EE--eecccccCCeeeccCCceEEEEEec
Q 002209 406 WRSDK---PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PE-IL--HKLDLRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 406 wspDg---~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~---~~-~l--~~~~~~~~~~~~SpDg~~l~~~~~~ 476 (953)
|+||+ +.++-. +....+.+|++ .... .. .+ ......+..++|+|||+.|+....+
T Consensus 212 ~sp~~~~~~~las~-------------s~D~~v~iWd~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 212 WSPTVLLRSYMASV-------------SQDRTCIIWTQ---DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp ECCCCSSSEEEEEE-------------ETTSCEEEEEE---SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred ECCCCCCceEEEEE-------------ECCCcEEEEEe---CCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC
Confidence 99996 333333 34557888886 2221 11 22 1234456678999999999887765
Q ss_pred ccCceEEEEEcCCC
Q 002209 477 KTRRTRTWVISPGS 490 (953)
Q Consensus 477 ~~~~~~l~~~d~~~ 490 (953)
+. .+||..+..+
T Consensus 276 ~~--v~lw~~~~~g 287 (297)
T 2pm7_B 276 NK--VTLWKENLEG 287 (297)
T ss_dssp SC--EEEEEECTTS
T ss_pred Cc--EEEEEECCCC
Confidence 43 4788776543
No 298
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.46 E-value=2.8e-13 Score=142.24 Aligned_cols=170 Identities=11% Similarity=0.036 Sum_probs=105.6
Q ss_pred HHHHHcCcEEEEcCCCCCCCCCChhhhhhh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcc
Q 002209 706 LLWLARGFAILGGPTTPIIGEGDEEANDRF-VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (953)
Q Consensus 706 ~~la~~G~~V~~~~~~~~~G~G~~~~~~~~-~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 784 (953)
..| +.+|.|++ .|.+|+|.+.....+ ... .++.+.+. ++ +++.|+||||||.+++.+|.++|+++
T Consensus 34 ~~L-~~~~~vi~---~Dl~G~G~S~~~~~~~~~~-------~~~~l~~~--l~-~~~~lvGhS~Gg~va~~~a~~~p~~v 99 (258)
T 1m33_A 34 EEL-SSHFTLHL---VDLPGFGRSRGFGALSLAD-------MAEAVLQQ--AP-DKAIWLGWSLGGLVASQIALTHPERV 99 (258)
T ss_dssp HHH-HTTSEEEE---ECCTTSTTCCSCCCCCHHH-------HHHHHHTT--SC-SSEEEEEETHHHHHHHHHHHHCGGGE
T ss_pred HHh-hcCcEEEE---eeCCCCCCCCCCCCcCHHH-------HHHHHHHH--hC-CCeEEEEECHHHHHHHHHHHHhhHhh
Confidence 344 46899999 555688877543211 222 22333332 33 68999999999999999999999999
Q ss_pred cEEEEcccCCCCCC-CCcC-cccc--------c-----------------c--hhhhhHH--------------------
Q 002209 785 CCGIARSGAYNRTL-TPFG-FQNE--------D-----------------R--TLWEATS-------------------- 815 (953)
Q Consensus 785 ~a~v~~~~~~d~~~-~~~~-~~~~--------~-----------------~--~~~~~~~-------------------- 815 (953)
+++|++++...... ..+. .... . . ......+
T Consensus 100 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (258)
T 1m33_A 100 RALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGG 179 (258)
T ss_dssp EEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHH
T ss_pred ceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHH
Confidence 99999876421100 0000 0000 0 0 0000000
Q ss_pred --HHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHH
Q 002209 816 --TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRW 893 (953)
Q Consensus 816 --~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 893 (953)
.+...+....+.++++|+|+++|++|..+| ...++.+.+.+. ..++++++++||... .+..+.+.+.+.+|
T Consensus 180 ~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~f 252 (258)
T 1m33_A 180 LEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKLWP----HSESYIFAKAAHAPF-ISHPAEFCHLLVAL 252 (258)
T ss_dssp HHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTTCT----TCEEEEETTCCSCHH-HHSHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHhhCCCCEEEEeecCCCCCC--HHHHHHHHHhCc----cceEEEeCCCCCCcc-ccCHHHHHHHHHHH
Confidence 011112223456789999999999999988 776665544332 358899999999863 45567788888888
Q ss_pred HHH
Q 002209 894 LQK 896 (953)
Q Consensus 894 l~~ 896 (953)
+.+
T Consensus 253 l~~ 255 (258)
T 1m33_A 253 KQR 255 (258)
T ss_dssp HTT
T ss_pred HHh
Confidence 854
No 299
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.46 E-value=7.1e-14 Score=145.38 Aligned_cols=149 Identities=13% Similarity=0.102 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC------CcccEEEEcccCCCCCCCCcCcccccchhhhh
Q 002209 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP------HLFCCGIARSGAYNRTLTPFGFQNEDRTLWEA 813 (953)
Q Consensus 740 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p------~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 813 (953)
..|+.+++++|.+....+..+++|+||||||.+|+.++.+.+ ..+++++.+++........ .+... ..+..
T Consensus 83 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-~~~~~--~~~~~ 159 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-EHPGE--LRITE 159 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-TSTTC--EEECG
T ss_pred hhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-ccccc--cccch
Confidence 345566666665542233468999999999999999998742 2478888887764311000 00000 00000
Q ss_pred HHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCC---CcEEEEEeCCCCccCCCcccHHHHHHHH
Q 002209 814 TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG---ALCRLVILPFESHGYAARESIMHVLWET 890 (953)
Q Consensus 814 ~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~H~~~~~~~~~~~~~~i 890 (953)
.+ ......+.++++|+|++||++|..|| +.++.++++.++..+ .....++++++||.+... ..+.+.+
T Consensus 160 --~~--~~~~~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~---~~~~~~i 230 (243)
T 1ycd_A 160 --KF--RDSFAVKPDMKTKMIFIYGASDQAVP--SVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK---KDIIRPI 230 (243)
T ss_dssp --GG--TTTTCCCTTCCCEEEEEEETTCSSSC--HHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC---HHHHHHH
T ss_pred --hH--HHhccCcccCCCCEEEEEeCCCCccC--HHHHHHHHHHhhhhccccccccEEEecCCCCcCCch---HHHHHHH
Confidence 01 01223456688999999999999999 999999999997641 111334566679987532 3578899
Q ss_pred HHHHHHhccC
Q 002209 891 DRWLQKYCVS 900 (953)
Q Consensus 891 ~~fl~~~l~~ 900 (953)
.+||+++++.
T Consensus 231 ~~fl~~~~~~ 240 (243)
T 1ycd_A 231 VEQITSSLQE 240 (243)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHhhhh
Confidence 9999998753
No 300
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.45 E-value=2e-11 Score=136.84 Aligned_cols=250 Identities=9% Similarity=-0.007 Sum_probs=155.8
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc-------eeecccCCCccccccccceEEecC----C--
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------ARPLFQSPDIYLNAIFDNFVWVNN----S-- 255 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~lt~~~~~~~~~~~~~~~wspD----g-- 255 (953)
..+....|+| +.|+... ....|+++++++++ ...+..+.. .+..+.|+|+ |
T Consensus 17 ~~i~~~~~~~--~~l~s~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCS---------GDGYLKVWDNKLLDNENPKDKSYSHFVHKS-----GLHHVDVLQAIERDAFE 80 (397)
T ss_dssp SCEEEEEECS--SEEEEEE---------TTSEEEEEESBCCTTCCGGGGEEEEECCTT-----CEEEEEEEEEEETTTEE
T ss_pred cCeEEEEecC--CeEEEEc---------CCCEEEEEECCCcccccCCCcceEEecCCC-----cEEEEEEecccccCCcc
Confidence 4688999998 6666644 25688888988876 444433322 2778999999 9
Q ss_pred -eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc------eeE
Q 002209 256 -TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT------VKE 327 (953)
Q Consensus 256 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~------~~~ 327 (953)
+.|+... ..+.|.++++ +++ ...
T Consensus 81 ~~~l~s~~-------------------------------------------------~dg~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTS-------------------------------------------------FSGDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEE-------------------------------------------------TTSCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEc-------------------------------------------------CCCCEEEEEccCCccccccccee
Confidence 8888661 1245666676 554 455
Q ss_pred eCCC------CcccccccC----CCCcE-EEEEEecCCccccccCCCCCcceEEEeccC------ce-EE-----EeccC
Q 002209 328 IGPP------AVYTSLDPS----PDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDG------IF-VR-----ELCDL 384 (953)
Q Consensus 328 l~~~------~~~~~~~~S----pDG~~-l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g------~~-~~-----~l~~~ 384 (953)
+... ..+..++|+ |||+. |+..+.+ +.|.+||+.. +. .+ .+...
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------GTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------CcEEEEeCCccccccccceeeccCcceeeee
Confidence 5443 567889999 99999 7777633 3899999976 32 11 11100
Q ss_pred CCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEee---c---ccc
Q 002209 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHK---L---DLR 457 (953)
Q Consensus 385 ~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~---~---~~~ 457 (953)
.. ........+..++|+||| .++.. +..+.+.+||+ ..++. ..+.. + ...
T Consensus 179 ---~~---~~~~~~~~i~~~~~~~~~-~l~~~-------------~~dg~i~i~d~---~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 179 ---VE---SPMTPSQFATSVDISERG-LIATG-------------FNNGTVQISEL---STLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp ---EC---CSSSSCCCCCEEEECTTS-EEEEE-------------CTTSEEEEEET---TTTEEEEEEECCC---CCCCC
T ss_pred ---ec---cccCCCCCceEEEECCCc-eEEEE-------------eCCCcEEEEEC---CCCceeEEEeccccccccCCc
Confidence 00 000112345789999999 55444 44568999996 33333 33343 4 666
Q ss_pred cCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecC-------------CCccccCCCCCCCeEeccCCCEE
Q 002209 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR-------------SSEDVYSDPGSPMMRRTSTGTYV 524 (953)
Q Consensus 458 ~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~-------------~~~~~~~~~~~p~~~~SpDG~~l 524 (953)
+..+.|+|||+.|+....++ ....|.++|+.++ +....... ....+.. +.|+|||++|
T Consensus 236 i~~i~~~~~~~~l~~~~~d~-~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~l 306 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSN-SFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMS------LSFNDSGETL 306 (397)
T ss_dssp EEEEEECSSTTEEEEEEEET-TEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEE------EEECSSSSEE
T ss_pred cceEEECCCCCEEEEEecCC-CCceEEEEECCCC--cccceeccCcccccccccccccCCcEEE------EEECCCCCEE
Confidence 78899999999988876541 1126777787764 33333322 2222222 7899999998
Q ss_pred EEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEec
Q 002209 525 IAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~ 569 (953)
+....+ ..|++||+.+++......
T Consensus 307 ~~~~~d---------------------g~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 307 CSAGWD---------------------GKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEETT---------------------SEEEEEETTTTEEEEEEE
T ss_pred EEEeCC---------------------CeEEEEEcCCCceeEEEe
Confidence 877632 249999999887766555
No 301
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.45 E-value=2.8e-13 Score=154.58 Aligned_cols=68 Identities=13% Similarity=0.124 Sum_probs=54.3
Q ss_pred cccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeC-CCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILP-FESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 824 ~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
..+.++++|+|+++|++|..+| ++.++++.+.+. ..++++++ ++||... .+..+.+.+.+.+||++++
T Consensus 375 ~~l~~i~~PvLvi~G~~D~~~p--~~~~~~l~~~~p----~~~~~~i~~~~GH~~~-~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 375 EALAMITQPALIICARSDGLYS--FDEHVEMGRSIP----NSRLCVVDTNEGHDFF-VMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHTTCCSCEEEEECTTCSSSC--HHHHHHHHHHST----TEEEEECCCSCGGGHH-HHTHHHHHHHHHHHHTC--
T ss_pred HHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHCC----CcEEEEeCCCCCcchH-HhCHHHHHHHHHHHHHHhc
Confidence 3467889999999999999998 888888877764 36899999 8999864 4556778888888887654
No 302
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.45 E-value=4.3e-13 Score=144.07 Aligned_cols=211 Identities=9% Similarity=-0.045 Sum_probs=133.1
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCC
Q 002209 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (953)
Q Consensus 645 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~ 724 (953)
...+|.++....+-+ .|+||++||...... .|.. ....|+ .+|.|+++ +.+
T Consensus 14 ~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~~~-----------~~~~----~~~~L~-~~~~vi~~---D~~ 64 (302)
T 1mj5_A 14 IEIKGRRMAYIDEGT----------GDPILFQHGNPTSSY-----------LWRN----IMPHCA-GLGRLIAC---DLI 64 (302)
T ss_dssp EEETTEEEEEEEESC----------SSEEEEECCTTCCGG-----------GGTT----TGGGGT-TSSEEEEE---CCT
T ss_pred EEECCEEEEEEEcCC----------CCEEEEECCCCCchh-----------hhHH----HHHHhc-cCCeEEEE---cCC
Confidence 345788887665421 478999999642211 1211 122344 44899994 446
Q ss_pred CCCChhhhh------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCC
Q 002209 725 GEGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (953)
Q Consensus 725 G~G~~~~~~------~~~~~~~~D~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~ 797 (953)
|+|.+.... ......++|+.++++.+ +. +++.|+||||||.+++.++.++|++++++|++++.....
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 138 (302)
T 1mj5_A 65 GMGDSDKLDPSGPERYAYAEHRDYLDALWEAL------DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPI 138 (302)
T ss_dssp TSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCB
T ss_pred CCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCch
Confidence 777764432 23556667776666554 23 689999999999999999999999999999998865311
Q ss_pred CCC-cC--cc-------cc----------------------cchhh--------------hhHHHHHh------------
Q 002209 798 LTP-FG--FQ-------NE----------------------DRTLW--------------EATSTYVE------------ 819 (953)
Q Consensus 798 ~~~-~~--~~-------~~----------------------~~~~~--------------~~~~~~~~------------ 819 (953)
... .. .. .. ..... .....+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (302)
T 1mj5_A 139 EWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPA 218 (302)
T ss_dssp CGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSH
T ss_pred hhhhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccch
Confidence 000 00 00 00 00000 00000000
Q ss_pred ------cCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHH
Q 002209 820 ------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRW 893 (953)
Q Consensus 820 ------~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 893 (953)
......+.++++|+|+++|++|..+| +..+.++.+.+ .. +++++ ++||... .+..+.+.+.+.+|
T Consensus 219 ~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~e~p~~~~~~i~~f 289 (302)
T 1mj5_A 219 DVVAIARDYAGWLSESPIPKLFINAEPGALTT--GRMRDFCRTWP----NQ-TEITV-AGAHFIQ-EDSPDEIGAAIAAF 289 (302)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS--HHHHHHHTTCS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhhccCCCeEEEEeCCCCCCC--hHHHHHHHHhc----CC-ceEEe-cCcCccc-ccCHHHHHHHHHHH
Confidence 01123456789999999999999998 77766665443 23 78888 9999864 56678899999999
Q ss_pred HHHhcc
Q 002209 894 LQKYCV 899 (953)
Q Consensus 894 l~~~l~ 899 (953)
+.+...
T Consensus 290 l~~~~~ 295 (302)
T 1mj5_A 290 VRRLRP 295 (302)
T ss_dssp HHHHSC
T ss_pred HHhhcc
Confidence 988654
No 303
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.45 E-value=3.4e-13 Score=150.27 Aligned_cols=229 Identities=14% Similarity=0.085 Sum_probs=134.6
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc--eeecccCCCccccccccceEEecCCeEEEEEecCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK--ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 267 (953)
.+....|||||+.|+... ....|.++++.++. .......... .+..++|+|||+.|+...
T Consensus 13 ~v~~~~~s~~g~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s----- 74 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTT---------ATNQVELYEQDGNGWKHARTFSDHDK----IVTCVDWAPKSNRIVTCS----- 74 (377)
T ss_dssp CCSCCEECSSSSEEECCC---------SSSCBCEEEEETTEEEECCCBCCCSS----CEEEEEECTTTCCEEEEE-----
T ss_pred cEEEEEECCCCCEEEEec---------CCCEEEEEEccCCceEEEEEEecCCc----eEEEEEEeCCCCEEEEEe-----
Confidence 588899999999988743 24456666666663 3222222222 277899999999888761
Q ss_pred CCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc----eeEeCCC-CcccccccCC
Q 002209 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP-AVYTSLDPSP 341 (953)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~----~~~l~~~-~~~~~~~~Sp 341 (953)
..+.|.++++ +++ ...+... ..+..++|+|
T Consensus 75 --------------------------------------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (377)
T 3dwl_C 75 --------------------------------------------QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP 110 (377)
T ss_dssp --------------------------------------------TTSSEEEC------CCCCEEECCCCSSCEEEEECCT
T ss_pred --------------------------------------------CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC
Confidence 1234666676 554 3333334 7788999999
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCce----EEEeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~----~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~ 417 (953)
||+.|+..+.+. .|.+||++.+. .+.+... ....+..++|+|||+.++..
T Consensus 111 ~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~~l~~~- 164 (377)
T 3dwl_C 111 NEDKFAVGSGAR-------------VISVCYFEQENDWWVSKHLKRP------------LRSTILSLDWHPNNVLLAAG- 164 (377)
T ss_dssp TSSCCEEEESSS-------------CEEECCC-----CCCCEEECSS------------CCSCEEEEEECTTSSEEEEE-
T ss_pred CCCEEEEEecCC-------------eEEEEEECCcccceeeeEeecc------------cCCCeEEEEEcCCCCEEEEE-
Confidence 999999887443 89999998654 3333320 11345689999999877665
Q ss_pred EeccCCCcccccccCCeEEEEecCCCC--C--------C--C-ceEE--eecccccCCeeeccCCceEEEEEecccCceE
Q 002209 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQ--G--------E--G-PEIL--HKLDLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~d~~~~~--g--------~--~-~~~l--~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
+..+.+.+|++.... . . . ...+ ..+...+..++|+|||+.|+..+.++ .
T Consensus 165 ------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----~ 228 (377)
T 3dwl_C 165 ------------CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS----S 228 (377)
T ss_dssp ------------ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT----E
T ss_pred ------------eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC----c
Confidence 345578888851000 0 0 0 1111 13445567799999999998886544 3
Q ss_pred EEEEcCCCCCCCc--EEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 483 TWVISPGSKDVAP--RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 483 l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
|.++++.++...+ ..........+.. +.|+|||++|+...
T Consensus 229 i~iwd~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 229 VTIAYPSAPEQPPRALITVKLSQLPLRS------LLWANESAIVAAGY 270 (377)
T ss_dssp EC-CEECSTTSCEEECCCEECSSSCEEE------EEEEETTEEEEEES
T ss_pred EEEEECCCCCCcceeeEeecCCCCceEE------EEEcCCCCEEEEEc
Confidence 4444544432111 1112222222222 78999999887654
No 304
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.45 E-value=6.9e-13 Score=142.80 Aligned_cols=196 Identities=14% Similarity=0.025 Sum_probs=122.1
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc--CcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR--GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~--G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~ 747 (953)
.|.||++||..... ..| ......|+++ ||.|+. ++.+|+|.+.... ...++|+.+.+
T Consensus 36 ~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~~~g~~vi~---~D~~G~G~s~~~~---~~~~~~~~~~l 94 (302)
T 1pja_A 36 YKPVIVVHGLFDSS-----------YSF----RHLLEYINETHPGTVVTV---LDLFDGRESLRPL---WEQVQGFREAV 94 (302)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHHSTTCCEEE---CCSSCSGGGGSCH---HHHHHHHHHHH
T ss_pred CCeEEEECCCCCCh-----------hHH----HHHHHHHHhcCCCcEEEE---eccCCCccchhhH---HHHHHHHHHHH
Confidence 57789999953110 111 2345667888 999999 5556777765432 23455555555
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-cccEEEEcccCCCCCCCCcCc-----cc----------------
Q 002209 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLTPFGF-----QN---------------- 805 (953)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~d~~~~~~~~-----~~---------------- 805 (953)
..+.+.. .+++.++||||||.+++.++.++|+ +++++|++++..........+ ..
T Consensus 95 ~~~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (302)
T 1pja_A 95 VPIMAKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQ 171 (302)
T ss_dssp HHHHHHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGG
T ss_pred HHHhhcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHH
Confidence 5555443 3689999999999999999999998 799999998764321110000 00
Q ss_pred --ccchhhhh---HHHHHhcC-----------------cccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHH------
Q 002209 806 --EDRTLWEA---TSTYVEMS-----------------PFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA------ 857 (953)
Q Consensus 806 --~~~~~~~~---~~~~~~~s-----------------p~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~------ 857 (953)
.....|.+ ...+.... ....+.+++ |+|+++|++|..+| +..+..+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~--~~~~~~~~~~~~~~~~ 248 (302)
T 1pja_A 172 EFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVIT--PWQSSFFGFYDANETV 248 (302)
T ss_dssp GSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSS--SGGGGGTCEECTTCCE
T ss_pred HhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccc--hhHhhHhhhcCCcccc
Confidence 00000000 01111000 023456788 99999999999998 7777665321
Q ss_pred ------------------HHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 858 ------------------LKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 858 ------------------l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
+... .+++++++|++||... .+..+.+.+.+.+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 249 LEMEEQLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTAW-HSNRTLYETCIEPWL 301 (302)
T ss_dssp ECGGGSHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTTT-TSCHHHHHHHTGGGC
T ss_pred cchhhhhhhhhhhhchhhHhhc-CCeEEEEecCcccccc-ccCHHHHHHHHHHhc
Confidence 2222 2389999999999864 455666766666664
No 305
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.45 E-value=4.9e-12 Score=142.30 Aligned_cols=251 Identities=14% Similarity=0.024 Sum_probs=149.9
Q ss_pred ceEEEEccCCCCCCc-eeeeecCCCCCcccceEecc-CCCeEEEEEeeccccCCCCcceEEEEECCCCc-------e-ee
Q 002209 164 GIGIHQLFPDGKLGQ-EIEIQGFPDGAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------A-RP 233 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~-~~~l~~~~~~~~~~~~~wSP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~-------~-~~ 233 (953)
.|.||++...+.... ...+.+ +...+....|+| |++.|+... ....|.++++.++. . ..
T Consensus 58 ~i~v~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s---------~dg~v~vw~~~~~~~~~~~~~~~~~ 126 (402)
T 2aq5_A 58 AFLVLPLGKTGRVDKNVPLVCG--HTAPVLDIAWCPHNDNVIASGS---------EDCTVMVWEIPDGGLVLPLREPVIT 126 (402)
T ss_dssp CEEEEETTCCEECCTTCCCBCC--CSSCEEEEEECTTCTTEEEEEE---------TTSEEEEEECCTTCCSSCBCSCSEE
T ss_pred EEEEEECccCCCCCCCCceEec--CCCCEEEEEeCCCCCCEEEEEe---------CCCeEEEEEccCCCCccccCCceEE
Confidence 679999854332111 112222 234789999999 888887754 24578888887763 2 22
Q ss_pred cccCCCccccccccceEEecCC-eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhc
Q 002209 234 LFQSPDIYLNAIFDNFVWVNNS-TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYA 312 (953)
Q Consensus 234 lt~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 312 (953)
+..+.. .+..++|+|+| +.|+... .
T Consensus 127 ~~~h~~-----~v~~~~~~p~~~~~l~s~~-------------------------------------------------~ 152 (402)
T 2aq5_A 127 LEGHTK-----RVGIVAWHPTAQNVLLSAG-------------------------------------------------C 152 (402)
T ss_dssp EECCSS-----CEEEEEECSSBTTEEEEEE-------------------------------------------------T
T ss_pred ecCCCC-----eEEEEEECcCCCCEEEEEc-------------------------------------------------C
Confidence 222222 27789999998 4666541 2
Q ss_pred cceEEEEEc-CCce-eEe--CCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-Ee-ccCC
Q 002209 313 TTQLVLVSL-DGTV-KEI--GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-EL-CDLP 385 (953)
Q Consensus 313 ~~~l~~~~~-~g~~-~~l--~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l-~~~~ 385 (953)
.+.|.++|+ +++. ..+ ... ..+..++|+|||+.|+..+.+. .|.+||+..+... .+ ..+.
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~ 219 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK-------------RVRVIEPRKGTVVAEKDRPHE 219 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS-------------EEEEEETTTTEEEEEEECSSC
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC-------------cEEEEeCCCCceeeeeccCCC
Confidence 245778888 6654 344 233 7788999999999999887443 8999999865543 33 2221
Q ss_pred CcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe--ecccccCCeee
Q 002209 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISW 463 (953)
Q Consensus 386 ~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~--~~~~~~~~~~~ 463 (953)
. ..+..+.|+|||+.++.... .+..+.|.+||+ .++..+..+. .....+..+.|
T Consensus 220 ~------------~~~~~~~~~~~~~~l~~g~~----------~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 220 G------------TRPVHAVFVSEGKILTTGFS----------RMSERQVALWDT--KHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp S------------SSCCEEEECSTTEEEEEEEC----------TTCCEEEEEEET--TBCSSCSEEEECCCCSSCEEEEE
T ss_pred C------------CcceEEEEcCCCcEEEEecc----------CCCCceEEEEcC--ccccCCceEEeccCCCceeEEEE
Confidence 1 12357899999975444311 023558899996 2223322222 33445677899
Q ss_pred ccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecC-CCccccCCCCCCCeEeccCCCEEE
Q 002209 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR-SSEDVYSDPGSPMMRRTSTGTYVI 525 (953)
Q Consensus 464 SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~SpDG~~l~ 525 (953)
+|||+.|+.+...++ ..++| ++.++......+... ....+.. +.|+|||..++
T Consensus 276 s~~~~~l~~~g~~dg-~i~i~--d~~~~~~~~~~l~~~~~~~~v~~------~~~sp~~~~~~ 329 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDS-SIRYF--EITSEAPFLHYLSMFSSKESQRG------MGYMPKRGLEV 329 (402)
T ss_dssp ETTTTEEEEEETTCS-CEEEE--EECSSTTCEEEEEEECCSSCCSE------EEECCGGGSCG
T ss_pred cCCCCEEEEEEcCCC-eEEEE--EecCCCcceEeecccccCCcccc------eEEecccccce
Confidence 999999887764332 23455 444431112223221 1122222 88999998765
No 306
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.45 E-value=1.9e-12 Score=127.60 Aligned_cols=169 Identities=12% Similarity=-0.048 Sum_probs=109.8
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCc---EEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF---AILGGPTTPIIGEGDEEANDRFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~---~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~ 746 (953)
.|+||++||.... ...| ......|+++|| .|+.++ ..|+|.+.. ........++.+.
T Consensus 3 ~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~~G~~~~~v~~~d---~~g~g~s~~--~~~~~~~~~~~~~ 62 (181)
T 1isp_A 3 HNPVVMVHGIGGA-----------SFNF----AGIKSYLVSQGWSRDKLYAVD---FWDKTGTNY--NNGPVLSRFVQKV 62 (181)
T ss_dssp CCCEEEECCTTCC-----------GGGG----HHHHHHHHHTTCCGGGEEECC---CSCTTCCHH--HHHHHHHHHHHHH
T ss_pred CCeEEEECCcCCC-----------HhHH----HHHHHHHHHcCCCCccEEEEe---cCCCCCchh--hhHHHHHHHHHHH
Confidence 4679999995311 0111 245567888998 588844 456665532 1223333343333
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC--CCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCccc
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFM 824 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 824 (953)
++.+ +.+++.++||||||.+++.++.++ |++++++|++++......... +. ...
T Consensus 63 ~~~~------~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~-~~--------------~~~--- 118 (181)
T 1isp_A 63 LDET------GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA-LP--------------GTD--- 118 (181)
T ss_dssp HHHH------CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC-CC--------------CSC---
T ss_pred HHHc------CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc-CC--------------CCC---
Confidence 3322 346899999999999999999988 889999999998643211100 00 000
Q ss_pred ccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 825 SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 825 ~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
...++|+|+++|++|..|| ++.++ -...+++++++++|.... +. ..+.+.+.+||.+.
T Consensus 119 --~~~~~p~l~i~G~~D~~v~--~~~~~---------~~~~~~~~~~~~gH~~~~-~~-~~~~~~i~~fl~~~ 176 (181)
T 1isp_A 119 --PNQKILYTSIYSSADMIVM--NYLSR---------LDGARNVQIHGVGHIGLL-YS-SQVNSLIKEGLNGG 176 (181)
T ss_dssp --TTCCCEEEEEEETTCSSSC--HHHHC---------CBTSEEEEESSCCTGGGG-GC-HHHHHHHHHHHTTT
T ss_pred --CccCCcEEEEecCCCcccc--ccccc---------CCCCcceeeccCchHhhc-cC-HHHHHHHHHHHhcc
Confidence 1235799999999999998 66431 223588899999998743 33 36778888887653
No 307
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.44 E-value=3.9e-12 Score=135.60 Aligned_cols=212 Identities=11% Similarity=0.109 Sum_probs=130.0
Q ss_pred EEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCC--------CC
Q 002209 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT--------TP 722 (953)
Q Consensus 651 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~--------~~ 722 (953)
.+.+.||+|.+ ++|.|+||.+||+. . ...+||+++.+++ .+
T Consensus 124 sf~~~i~lP~g-----~~P~Pvii~~~~~~----------------~----------~~~~G~A~i~f~~~~va~d~~~g 172 (433)
T 4g4g_A 124 SFSASIRKPSG-----AGPFPAIIGIGGAS----------------I----------PIPSNVATITFNNDEFGAQMGSG 172 (433)
T ss_dssp EEEEEEECCSS-----SCCEEEEEEESCCC----------------S----------CCCTTSEEEEECHHHHSCCSSGG
T ss_pred EEEEEEECCCC-----CCCccEEEEECCCc----------------c----------ccCCCeEEEEeCCcccccccCCC
Confidence 46899999975 45799999998731 1 0456999998554 22
Q ss_pred CCCCCChhhh-----hhh--HHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcc
Q 002209 723 IIGEGDEEAN-----DRF--VEQLVACAEAAVEEVVR----RGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (953)
Q Consensus 723 ~~G~G~~~~~-----~~~--~~~~~~D~~~~~~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (953)
++|+|. +.. ..+ ......++..+++||.. ++.||++||+|+|+|+||..|+++++.+ ++|+++|+.+
T Consensus 173 srG~g~-f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~ 250 (433)
T 4g4g_A 173 SRGQGK-FYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQE 250 (433)
T ss_dssp GTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEES
T ss_pred cCCccc-cccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEec
Confidence 344443 221 111 22346799999999999 8899999999999999999999999999 6899999987
Q ss_pred cCCCCCCC-C-------cCcccc------cchhhhhHHHHHhc------Ccccc---cCC-CCCcEEEEEeCCCCCCCCc
Q 002209 792 GAYNRTLT-P-------FGFQNE------DRTLWEATSTYVEM------SPFMS---ANK-LKKPILLVHGEEDNNSGTL 847 (953)
Q Consensus 792 ~~~d~~~~-~-------~~~~~~------~~~~~~~~~~~~~~------sp~~~---~~~-i~~P~Li~~G~~D~~v~~~ 847 (953)
+..+-... . ++.... ....|-.. .|..+ -|+++ +.- ...|+|++.| +|..++
T Consensus 251 sg~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~-~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~-- 326 (433)
T 4g4g_A 251 SGAGGAACWRISDQQKAAGANIQTAAQIITENPWFSR-NFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLG-- 326 (433)
T ss_dssp CCTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCT-TTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTC--
T ss_pred CCCCchhhhhhchhhcccCcchhhhhcccCCccccch-hhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCC--
Confidence 64331110 0 000000 00011100 01111 01110 000 2579999999 887776
Q ss_pred hHHHHHHHHHHH------hCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccCCCC
Q 002209 848 TMQSDRFFNALK------GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNTA 903 (953)
Q Consensus 848 ~~~~~~~~~~l~------~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 903 (953)
+......+.+++ .....+.+.+.++.+|.....+ ..+.+.+||+++|+....
T Consensus 327 p~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~----~r~~~~~F~~k~Lkg~~~ 384 (433)
T 4g4g_A 327 PVSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSS----QNQDLNSYINYFLLGQGS 384 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGG----GHHHHHHHHHHHTTCCSC
T ss_pred cHHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHH----HHHHHHHHHHHHhCCCCC
Confidence 665443333332 2334577766555566533222 246778999999987644
No 308
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.44 E-value=3.5e-12 Score=134.75 Aligned_cols=213 Identities=14% Similarity=0.136 Sum_probs=129.3
Q ss_pred cEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCC--------C
Q 002209 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT--------T 721 (953)
Q Consensus 650 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~--------~ 721 (953)
..+.+.||+|.+. ++|.|+||.+||+. + ...+||+|+.+++ .
T Consensus 90 ~~~~~~i~lP~~~----~~p~Pvii~i~~~~----------------~----------~~~~G~a~~~~~~~~v~~~~~~ 139 (375)
T 3pic_A 90 ISFTVTITYPSSG----TAPYPAIIGYGGGS----------------L----------PAPAGVAMINFNNDNIAAQVNT 139 (375)
T ss_dssp EEEEEEEECCSSS----CSSEEEEEEETTCS----------------S----------CCCTTCEEEEECHHHHSCCSSG
T ss_pred eEEEEEEECCCCC----CCCccEEEEECCCc----------------c----------ccCCCeEEEEecccccccccCC
Confidence 3688999999752 35799999999841 1 1357899988543 2
Q ss_pred CCCCCCChhhh-----hhh--HHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEccc
Q 002209 722 PIIGEGDEEAN-----DRF--VEQLVACAEAAVEEVVRRG--VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (953)
Q Consensus 722 ~~~G~G~~~~~-----~~~--~~~~~~D~~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (953)
+.+|+|. +.. ..+ +.....|+..+++||..++ .||++||+|+|||+||.+|+++++.+ ++|+++|+.++
T Consensus 140 gs~g~g~-f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~ 217 (375)
T 3pic_A 140 GSRGQGK-FYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQES 217 (375)
T ss_dssp GGTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESC
T ss_pred CCcccee-cccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccC
Confidence 3344443 110 011 2334579999999999998 89999999999999999999999999 58999999876
Q ss_pred CCCCCCC--------CcCcccc------cchhhhhHHHHHhc------Cccc---ccCC-CCCcEEEEEeCCCCCCCCch
Q 002209 793 AYNRTLT--------PFGFQNE------DRTLWEATSTYVEM------SPFM---SANK-LKKPILLVHGEEDNNSGTLT 848 (953)
Q Consensus 793 ~~d~~~~--------~~~~~~~------~~~~~~~~~~~~~~------sp~~---~~~~-i~~P~Li~~G~~D~~v~~~~ 848 (953)
..+-... .++.... ....|-.. .|..+ -|++ .+.- ...|+||+.| .|..++ +
T Consensus 218 g~~G~~~~R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~-~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~--~ 293 (375)
T 3pic_A 218 GAGGSACWRISDYLKSQGANIQTASEIIGEDPWFST-TFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLG--P 293 (375)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCSCSCG-GGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGC--H
T ss_pred CCCchhhhhhhhhhcccCccccccccccCccccccc-chhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccC--c
Confidence 4331100 0000000 00011100 01111 0111 1111 2579999999 888877 6
Q ss_pred HHHHHHHHHH----HhCCC--cEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhccCCC
Q 002209 849 MQSDRFFNAL----KGHGA--LCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (953)
Q Consensus 849 ~~~~~~~~~l----~~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (953)
......+.++ +..|+ .+.+.+..+.+|..... ...+.+.+||+++|+...
T Consensus 294 ~g~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~fp~----~~~~~~~~F~~k~L~~~~ 349 (375)
T 3pic_A 294 QSCFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAFPS----NQQSQLTAFVQKFLLGQS 349 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCCCG----GGHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHcCCccceEEEeeCCCccccCCH----HHHHHHHHHHHHHhCCCC
Confidence 6554344333 23343 46665433445532222 224678999999998753
No 309
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.44 E-value=1e-12 Score=142.46 Aligned_cols=212 Identities=16% Similarity=0.091 Sum_probs=133.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|..++....-+ ++.|.||++||.+.... .| . .....|+ .+|.|++ .|.+|+
T Consensus 14 ~~g~~l~y~~~G~--------g~~~pvvllHG~~~~~~-----------~w---~-~~~~~L~-~~~~via---~Dl~G~ 66 (316)
T 3afi_E 14 VLGSSMAYRETGA--------QDAPVVLFLHGNPTSSH-----------IW---R-NILPLVS-PVAHCIA---PDLIGF 66 (316)
T ss_dssp ETTEEEEEEEESC--------TTSCEEEEECCTTCCGG-----------GG---T-TTHHHHT-TTSEEEE---ECCTTS
T ss_pred eCCEEEEEEEeCC--------CCCCeEEEECCCCCchH-----------HH---H-HHHHHHh-hCCEEEE---ECCCCC
Confidence 3677777665421 12358999999642211 12 1 1233444 4599999 555788
Q ss_pred CChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC---CCCCC-
Q 002209 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN---RTLTP- 800 (953)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d---~~~~~- 800 (953)
|.|.... .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|++++... +....
T Consensus 67 G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 140 (316)
T 3afi_E 67 GQSGKPDIAYRFFDHVRYLDAFIEQR------GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHH 140 (316)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHc------CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccc
Confidence 8875432 23566677777766654 236899999999999999999999999999999876321 00000
Q ss_pred -------------------cCccc--------------------ccchh-hhhHHHHHhc-----------------Cc-
Q 002209 801 -------------------FGFQN--------------------EDRTL-WEATSTYVEM-----------------SP- 822 (953)
Q Consensus 801 -------------------~~~~~--------------------~~~~~-~~~~~~~~~~-----------------sp- 822 (953)
+.... ..... .+..+.|... ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (316)
T 3afi_E 141 TEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIA 220 (316)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBT
T ss_pred hhhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhcccc
Confidence 00000 00000 0000011100 00
Q ss_pred -------------ccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHH
Q 002209 823 -------------FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (953)
Q Consensus 823 -------------~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 889 (953)
...+.++++|+|+++|++|..+| +..+.++.+.+. ..++++++++||... .+..+.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~GH~~~-~e~p~~~~~~ 293 (316)
T 3afi_E 221 GEPADVYEALQSAHAALAASSYPKLLFTGEPGALVS--PEFAERFAASLT----RCALIRLGAGLHYLQ-EDHADAIGRS 293 (316)
T ss_dssp TBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSS----SEEEEEEEEECSCHH-HHHHHHHHHH
T ss_pred ccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccC--HHHHHHHHHhCC----CCeEEEcCCCCCCch-hhCHHHHHHH
Confidence 01123578999999999999988 877777766653 368999999999863 5667788899
Q ss_pred HHHHHHHhc
Q 002209 890 TDRWLQKYC 898 (953)
Q Consensus 890 i~~fl~~~l 898 (953)
+.+||.+..
T Consensus 294 i~~fl~~~~ 302 (316)
T 3afi_E 294 VAGWIAGIE 302 (316)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhhcC
Confidence 999998764
No 310
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.8e-12 Score=146.23 Aligned_cols=187 Identities=12% Similarity=0.149 Sum_probs=113.3
Q ss_pred CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC
Q 002209 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (953)
Q Consensus 332 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~ 411 (953)
..+..++|||||++||..+.++ ++.+|+.++ ....+. +. .+.. ...+..++|||||+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-------------~V~iwd~~~-~l~~l~-~~----~~~~----~~sv~svafSPDG~ 142 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-------------NVSVFKDNK-MLTNLD-SK----GNLS----SRTYHCFEWNPIES 142 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-------------CEEEEETTE-EEEECC-CS----SCST----TTCEEEEEECSSSS
T ss_pred CcEEEEEECCCCCEEEEEeCCC-------------cEEEEeCCc-eeeecc-CC----Cccc----cccEEEEEEcCCCC
Confidence 5788999999999999988554 899999655 222222 11 1100 02356899999999
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc--------eEEe----ecccccCCeeeccCCceEEEEEecccC
Q 002209 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP--------EILH----KLDLRYGGISWCDDSLALVYESWYKTR 479 (953)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~--------~~l~----~~~~~~~~~~~SpDg~~l~~~~~~~~~ 479 (953)
.|+.. +..+.|.+|++ .++.. ..+. .+...+..++||||| |+.++.++
T Consensus 143 ~LAsg-------------s~DGtVkIWd~---~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~-- 202 (588)
T 2j04_A 143 SIVVG-------------NEDGELQFFSI---RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNN-- 202 (588)
T ss_dssp CEEEE-------------ETTSEEEEEEC---CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTC--
T ss_pred EEEEE-------------cCCCEEEEEEC---CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCC--
Confidence 88887 55678999996 44432 2231 223467789999999 65555443
Q ss_pred ceEEEEEcCCCCCCC--cEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEE
Q 002209 480 RTRTWVISPGSKDVA--PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (953)
Q Consensus 480 ~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 557 (953)
.+++++++++... ...+...+...+.. ++|+ |+.|+.... ..+++|
T Consensus 203 --tVrlWd~~~~~~~~~~~tL~~~h~~~V~s------vaFs--g~~LASa~~----------------------~tIkLW 250 (588)
T 2j04_A 203 --SVFSMTVSASSHQPVSRMIQNASRRKITD------LKIV--DYKVVLTCP----------------------GYVHKI 250 (588)
T ss_dssp --CEEEECCCSSSSCCCEEEEECCCSSCCCC------EEEE--TTEEEEECS----------------------SEEEEE
T ss_pred --eEEEEECCCCccccceeeecccccCcEEE------EEEE--CCEEEEEeC----------------------CeEEEE
Confidence 3555566654211 12232233233333 7898 577776541 249999
Q ss_pred ECCCCceEEEeccCcccceeeeEeeccCCccccc--cccCCEEEEEEec
Q 002209 558 DINTGSKERIWESDKEKYYETTVALMSDQTEGDL--YLNQLKILTSKES 604 (953)
Q Consensus 558 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~~~ 604 (953)
|+.+++...+..+... .+ ...+| ++|+..++...++
T Consensus 251 d~~~~~~~~~~~gh~~----~V-------~~va~~~s~d~~~La~a~ed 288 (588)
T 2j04_A 251 DLKNYSISSLKTGSLE----NF-------HIIPLNHEKESTILLMSNKT 288 (588)
T ss_dssp ETTTTEEEEEECSCCS----CC-------CEEEETTCSSCEEEEECSSC
T ss_pred ECCCCeEEEEEcCCCc----eE-------EEEEeeeCCCCCEEEEEcCC
Confidence 9998887544422211 01 12356 7888766654433
No 311
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.44 E-value=3.7e-11 Score=131.78 Aligned_cols=289 Identities=9% Similarity=-0.044 Sum_probs=157.5
Q ss_pred ceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002209 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (953)
Q Consensus 193 ~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 272 (953)
.++++++++.++... ....|+++|+++++..+....+... ....++|+|||+.++++..
T Consensus 4 g~~~~~~~~~~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~~~v~~~--------- 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN---------YPNNLHVVDVASDTVYKSCVMPDKF---GPGTAMMAPDNRTAYVLNN--------- 62 (349)
T ss_dssp CCCCCTTCEEEEEEE---------TTTEEEEEETTTTEEEEEEECSSCC---SSCEEEECTTSSEEEEEET---------
T ss_pred cccccCCCEEEEEeC---------CCCeEEEEECCCCcEEEEEecCCCC---CCceeEECCCCCEEEEEeC---------
Confidence 457787776555433 3678999999998766544333200 1457899999998876610
Q ss_pred CCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-eCCCC-------cccccccCCCC
Q 002209 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPPA-------VYTSLDPSPDE 343 (953)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-l~~~~-------~~~~~~~SpDG 343 (953)
....|+++|+ +++... +.... .+..++|||||
T Consensus 63 ---------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg 103 (349)
T 1jmx_B 63 ---------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG 103 (349)
T ss_dssp ---------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS
T ss_pred ---------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC
Confidence 2356888998 775443 32221 25788999999
Q ss_pred cEEEEEEecCCccccccCCCCCcceEEEeccCceEEE-eccCCCcccCCccccccccCccceeeccCCCCceEEEEeccC
Q 002209 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDG 422 (953)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~ 422 (953)
++|++...+...... ........|++||+++++... +..... ...+..++|+|||+ +++.
T Consensus 104 ~~l~~~~~~~~~~~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~~s~dg~-l~~~------ 164 (349)
T 1jmx_B 104 KEVYATVNPTQRLND-HYVVKPPRLEVFSTADGLEAKPVRTFPM-----------PRQVYLMRAADDGS-LYVA------ 164 (349)
T ss_dssp SEEEEEEEEEEECSS-CEEECCCEEEEEEGGGGGGBCCSEEEEC-----------CSSCCCEEECTTSC-EEEE------
T ss_pred CEEEEEccccccccc-ccccCCCeEEEEECCCccccceeeeccC-----------CCcccceeECCCCc-EEEc------
Confidence 999988744100000 000012489999998543221 111110 01345678999998 4442
Q ss_pred CCcccccccCCeEEEEecCCCCCCCceE-Eeeccc------------------------ccCCeeeccCCceEEEEEecc
Q 002209 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLDL------------------------RYGGISWCDDSLALVYESWYK 477 (953)
Q Consensus 423 ~~~~~~~~~~~~l~~~d~~~~~g~~~~~-l~~~~~------------------------~~~~~~~SpDg~~l~~~~~~~ 477 (953)
+ ..++++|+ .+++... +..... ....+.+++|+........
T Consensus 165 -------~--~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-- 230 (349)
T 1jmx_B 165 -------G--PDIYKMDV---KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD-- 230 (349)
T ss_dssp -------S--SSEEEECT---TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE--
T ss_pred -------c--CcEEEEeC---CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc--
Confidence 1 23888885 4444332 221110 0111333333322111000
Q ss_pred cCceEEEEEcCCCCCCCcEEeec-CCCccccCCCCCCCeEecc-CCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEE
Q 002209 478 TRRTRTWVISPGSKDVAPRILFD-RSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (953)
Q Consensus 478 ~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~Sp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 555 (953)
....++.++..++ +...+.- ........ +.||| ||++++.. .. .|+
T Consensus 231 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~sp~dg~~l~~~--~~---------------------~v~ 278 (349)
T 1jmx_B 231 -LLYGYLSVDLKTG--KTHTQEFADLTELYFT------GLRSPKDPNQIYGV--LN---------------------RLA 278 (349)
T ss_dssp -EEEEEEEEETTTC--CEEEEEEEECSSCEEE------EEECSSCTTEEEEE--ES---------------------EEE
T ss_pred -cceeEEEEeccCC--cEEecccccCCCccee------eEecCCCCCEEEEE--cC---------------------eEE
Confidence 1123444676664 2222211 11111111 67899 99988766 11 499
Q ss_pred EEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002209 556 LFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (953)
Q Consensus 556 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~ 622 (953)
+||+.+++.......... . ...+|++||+.+++. .. ...++++++.+++..
T Consensus 279 ~~d~~~~~~~~~~~~~~~-----~-------~~~~~s~dg~~l~~~-~~---~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 279 KYDLKQRKLIKAANLDHT-----Y-------YCVAFDKKGDKLYLG-GT---FNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEETTTTEEEEEEECSSC-----C-------CEEEECSSSSCEEEE-SB---SSEEEEEETTTTEEE
T ss_pred EEECccCeEEEEEcCCCC-----c-------cceEECCCCCEEEEe-cC---CCeEEEEecccccee
Confidence 999999887655543321 0 124689999988763 21 267999998887643
No 312
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.6e-11 Score=132.23 Aligned_cols=275 Identities=9% Similarity=0.060 Sum_probs=167.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++| |||++|+....+ +.|.+|++.+ + .....+... ..
T Consensus 20 ~v~~~~~-~~~~~l~s~~~d---------------------------------g~v~vw~~~~-~--~~~~~~~~~--~~ 60 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRD---------------------------------GTVRLWSKDD-Q--WLGTVVYTG--QG 60 (313)
T ss_dssp CEEEEEE-EETTEEEEEETT---------------------------------SEEEEEEESS-S--EEEEEEEEC--SS
T ss_pred CcEEEEe-cCCCEEEEEEcC---------------------------------CcEEEEECCC-C--EEEEEeecC--Cc
Confidence 4667888 999999988775 3689999843 1 122333322 34
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc----eeecccCCCccccccccceEEecCCeEEEEEecCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 265 (953)
.+....|+|||+.|+.... ...|.++++.... ...+..+.. .+..+.| +++.|+...
T Consensus 61 ~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~--~~~~l~~~~--- 121 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGK---------DTMINGVPLFATSGEDPLYTLIGHQG-----NVCSLSF--QDGVVISGS--- 121 (313)
T ss_dssp CEEEEEEETTTTEEEEEET---------TSCEEEEETTCCTTSCC-CEECCCSS-----CEEEEEE--ETTEEEEEE---
T ss_pred cEEEEEECCCCCEEEEecC---------CCeEEEEEeeecCCCCcccchhhccc-----CEEEEEe--cCCEEEEEe---
Confidence 7889999999999988652 4566666765432 122211111 2556777 566666551
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCC-CcccccccCC-CC
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSP-DE 343 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~Sp-DG 343 (953)
..+.|.+++.......+... ..+..+.|+| ++
T Consensus 122 ----------------------------------------------~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 122 ----------------------------------------------WDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp ----------------------------------------------TTSEEEEEETTEEEEEEECCSSCEEEEEEEETTT
T ss_pred ----------------------------------------------CCCCEEEEcCCcEEEecccCCCceeEEEEccCCC
Confidence 12345555532223333333 6677788888 99
Q ss_pred cEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
+.|+..+.+ +.|.+||.. ...+.+... ....+..++|+|+++ ++..
T Consensus 156 ~~l~~~~~d-------------~~i~i~d~~-~~~~~~~~~------------~~~~i~~~~~~~~~~-~~~~------- 201 (313)
T 3odt_A 156 NKFLTASAD-------------KTIKLWQND-KVIKTFSGI------------HNDVVRHLAVVDDGH-FISC------- 201 (313)
T ss_dssp TEEEEEETT-------------SCEEEEETT-EEEEEECSS------------CSSCEEEEEEEETTE-EEEE-------
T ss_pred CEEEEEECC-------------CCEEEEecC-ceEEEEecc------------CcccEEEEEEcCCCe-EEEc-------
Confidence 998887744 389999933 223333221 112346799999998 4443
Q ss_pred CcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCC
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS 503 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 503 (953)
+..+.+.+||+ .++.....+..+...+..+.|+||| .|+....++ .++++++.++ +.........
T Consensus 202 ------~~dg~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg----~v~iwd~~~~--~~~~~~~~~~ 266 (313)
T 3odt_A 202 ------SNDGLIKLVDM--HTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDR----TVRIWSKENG--SLKQVITLPA 266 (313)
T ss_dssp ------ETTSEEEEEET--TTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTS----EEEEECTTTC--CEEEEEECSS
T ss_pred ------cCCCeEEEEEC--CchhhhhhhhcCCceEEEEEEecCC-CEEEEecCC----EEEEEECCCC--ceeEEEeccC
Confidence 34568999996 2333334455566778889999999 465554332 6777888775 3333333333
Q ss_pred ccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceE
Q 002209 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (953)
Q Consensus 504 ~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~ 565 (953)
..+.. +.|+|||+.++ ... ...|++||+.+++..
T Consensus 267 ~~i~~------~~~~~~~~~~~-~~~---------------------dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 267 ISIWS------VDCMSNGDIIV-GSS---------------------DNLVRIFSQEKSRWA 300 (313)
T ss_dssp SCEEE------EEECTTSCEEE-EET---------------------TSCEEEEESCGGGCC
T ss_pred ceEEE------EEEccCCCEEE-EeC---------------------CCcEEEEeCCCCcee
Confidence 33333 78999998544 321 124999999876644
No 313
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.43 E-value=6.7e-11 Score=129.20 Aligned_cols=290 Identities=8% Similarity=0.016 Sum_probs=166.2
Q ss_pred CcccceEeccCC-CeEEEEEeeccccCCCCcceEEEEECCCCce-----e-ecccCCCccccccccceEEecCCeEEEEE
Q 002209 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-----R-PLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 189 ~~~~~~~wSPDG-~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~-----~-~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 261 (953)
..+...+|+||+ +.|+..+ . +..|.+||+..++. . .+..+.. .+..+.|+|||+.|+..
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s-------~--D~~i~vWd~~~~~~~~~~~~~~l~~h~~-----~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSAS-------R--DKTIIMWKLTRDETNYGIPQRALRGHSH-----FVSDVVISSDGQFALSG 104 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEE-------T--TSCEEEEEECCSSSCSEEEEEEECCCSS-----CEEEEEECTTSSEEEEE
T ss_pred CCEEEEEEeCCCCCEEEEEc-------C--CCeEEEEECCCCCcccceeeEEEeCCCC-----CEEEEEECCCCCEEEEE
Confidence 479999999985 5555543 2 34566666655432 1 1222222 27789999999999866
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-eCCC-Ccccccc
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPP-AVYTSLD 338 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-l~~~-~~~~~~~ 338 (953)
. ..+.|..++. .+.... .... .......
T Consensus 105 ~-------------------------------------------------~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (340)
T 4aow_A 105 S-------------------------------------------------WDGTLRLWDLTTGTTTRRFVGHTKDVLSVA 135 (340)
T ss_dssp E-------------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred c-------------------------------------------------ccccceEEeecccceeeeecCCCCceeEEE
Confidence 1 1234556666 443222 2222 5566778
Q ss_pred cCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002209 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 339 ~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
++++++.|+..+.+. .+.+||+.+.......... ....+..++|++++...++...
T Consensus 136 ~~~~~~~l~s~s~d~-------------~~~~~d~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 136 FSSDNRQIVSGSRDK-------------TIKLWNTLGVCKYTVQDES-----------HSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp ECTTSSCEEEEETTS-------------CEEEECTTSCEEEEECSSS-----------CSSCEEEEEECSCSSSCEEEEE
T ss_pred EeecCccceeecCCC-------------eEEEEEeCCCceEEEEecc-----------ccCcccceEEccCCCCcEEEEE
Confidence 999999998877443 7889998765544332211 1123456789999876655422
Q ss_pred eccCCCcccccccCCeEEEEecCCCCCCC-ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEE
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~g~~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (953)
+....+.++++ ..++ ...+..+...+..++|+|||+.|+..+.++ .+.++|+.+. +...
T Consensus 192 -----------~~d~~i~i~d~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg----~i~iwd~~~~--~~~~ 251 (340)
T 4aow_A 192 -----------GWDKLVKVWNL---ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG----QAMLWDLNEG--KHLY 251 (340)
T ss_dssp -----------ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC----EEEEEETTTT--EEEE
T ss_pred -----------cCCCEEEEEEC---CCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC----eEEEEEeccC--ceee
Confidence 23456888886 3333 233445566778899999999988776543 4556676663 2222
Q ss_pred eecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCccccee
Q 002209 498 LFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYE 577 (953)
Q Consensus 498 ~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~ 577 (953)
..... ..+.. +.|+|++..++... + ..|++||+.++........... ..
T Consensus 252 ~~~~~-~~v~~------~~~~~~~~~~~~~~-d---------------------~~i~iwd~~~~~~~~~~~~~~~--~~ 300 (340)
T 4aow_A 252 TLDGG-DIINA------LCFSPNRYWLCAAT-G---------------------PSIKIWDLEGKIIVDELKQEVI--ST 300 (340)
T ss_dssp EEECS-SCEEE------EEECSSSSEEEEEE-T---------------------TEEEEEETTTTEEEEEECCC------
T ss_pred eecCC-ceEEe------eecCCCCceeeccC-C---------------------CEEEEEECCCCeEEEeccccce--ee
Confidence 22221 11221 67899987665443 1 2489999987765443332211 00
Q ss_pred eeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002209 578 TTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (953)
Q Consensus 578 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~ 620 (953)
....-...-...+|+|||+.|+..... ..|++|++.+|+
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~sgs~D----g~v~iW~~~tGt 339 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFAGYTD----NLVRVWQVTIGT 339 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEC--
T ss_pred eccCCCCCEEEEEECCCCCEEEEEeCC----CEEEEEeCCCcC
Confidence 000000000124789999977643332 348888888875
No 314
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.43 E-value=6e-12 Score=134.89 Aligned_cols=206 Identities=12% Similarity=-0.007 Sum_probs=125.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|..++....- . -|.||++||.+... ..| ......|++ .|.|++ .|.+|+
T Consensus 16 ~~g~~l~y~~~G--------~--g~~lvllHG~~~~~--------------~~w-~~~~~~L~~-~~~via---~Dl~G~ 66 (294)
T 1ehy_A 16 LPDVKIHYVREG--------A--GPTLLLLHGWPGFW--------------WEW-SKVIGPLAE-HYDVIV---PDLRGF 66 (294)
T ss_dssp CSSCEEEEEEEE--------C--SSEEEEECCSSCCG--------------GGG-HHHHHHHHT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcC--------C--CCEEEEECCCCcch--------------hhH-HHHHHHHhh-cCEEEe---cCCCCC
Confidence 578888765532 1 36799999964211 111 123334544 499999 555788
Q ss_pred CChhhhh------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC
Q 002209 727 GDEEAND------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (953)
Q Consensus 727 G~~~~~~------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~ 800 (953)
|.|..+. .......+|+.+.++.+ ..+++.|+||||||.+++.+|.++|++++++|++++........
T Consensus 67 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~ 140 (294)
T 1ehy_A 67 GDSEKPDLNDLSKYSLDKAADDQAALLDAL------GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPV 140 (294)
T ss_dssp TTSCCCCTTCGGGGCHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC---
T ss_pred CCCCCCccccccCcCHHHHHHHHHHHHHHc------CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchh
Confidence 8875431 22556677777766654 23589999999999999999999999999999988632110000
Q ss_pred ----------cC--ccc--------ccch-------------------hh--hhHHHHHh-----------------c--
Q 002209 801 ----------FG--FQN--------EDRT-------------------LW--EATSTYVE-----------------M-- 820 (953)
Q Consensus 801 ----------~~--~~~--------~~~~-------------------~~--~~~~~~~~-----------------~-- 820 (953)
+. +.. .... .+ +..+.+.. .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (294)
T 1ehy_A 141 YFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIR 220 (294)
T ss_dssp --------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSS
T ss_pred hccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHh
Confidence 00 000 0000 00 00001100 0
Q ss_pred Cccc-----ccCCCCCcEEEEEeCCCCCCCCch-HHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 821 SPFM-----SANKLKKPILLVHGEEDNNSGTLT-MQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 821 sp~~-----~~~~i~~P~Li~~G~~D~~v~~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
.... .+.++++|+|+++|++|..+| . .....+.+.+ ...+++++|++||.. ..+..+.+.+.+.+||
T Consensus 221 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 221 PDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKYY----SNYTMETIEDCGHFL-MVEKPEIAIDRIKTAF 293 (294)
T ss_dssp SSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHHB----SSEEEEEETTCCSCH-HHHCHHHHHHHHHHHC
T ss_pred hhhhhcCCcccCcCCCCEEEEEeCCCCCcc--hHHHHHHHHHHc----CCCceEEeCCCCCCh-hhhCHHHHHHHHHHHh
Confidence 0001 122789999999999999876 4 3344443332 247999999999975 3566777778888875
No 315
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.43 E-value=3.5e-11 Score=135.21 Aligned_cols=283 Identities=12% Similarity=0.129 Sum_probs=177.3
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
......|++ +.++.... ...|+++++++++...+..... ...+..++|+|||+.|++..
T Consensus 95 ~~~~~~~s~--~~l~~~~~---------d~~v~lw~~~~~~~~~~~~~~~---~~~v~~v~~s~~~~~l~~~~------- 153 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVAL---------ERNVYVWNADSGSVSALAETDE---STYVASVKWSHDGSFLSVGL------- 153 (401)
T ss_dssp TCBCEEECT--TSEEEEEE---------TTEEEEEETTTCCEEEEEECCT---TCCEEEEEECTTSSEEEEEE-------
T ss_pred eEEEEeecC--CCEEEEEC---------CCeEEEeeCCCCcEeEeeecCC---CCCEEEEEECCCCCEEEEEC-------
Confidence 455677775 44555442 5689999999988766654421 11277899999999998761
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEeCCC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDG~~l 346 (953)
..+.|.++++ +++ ...+... ..+..++| +++.|
T Consensus 154 ------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 189 (401)
T 4aez_A 154 ------------------------------------------GNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL 189 (401)
T ss_dssp ------------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred ------------------------------------------CCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence 2245777888 664 4444444 67777888 66777
Q ss_pred EEEEecCCccccccCCCCCcceEEEecc-Cc-eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTD-GI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~-g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
+..+.+ +.|.+||+. .+ ....+..+. ..+..+.|+|||+.++..
T Consensus 190 ~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~s~-------- 235 (401)
T 4aez_A 190 SSGSRS-------------GAIHHHDVRIANHQIGTLQGHS-------------SEVCGLAWRSDGLQLASG-------- 235 (401)
T ss_dssp EEEETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEcCC-------------CCEEEEecccCcceeeEEcCCC-------------CCeeEEEEcCCCCEEEEE--------
Confidence 777633 389999997 33 233333322 345679999999877665
Q ss_pred cccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCC
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS 503 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 503 (953)
+..+.|.+||+ ..++. ..+..+...+..++|+|++..+++..... ....|.++|+.++ +........
T Consensus 236 -----~~d~~v~iwd~---~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs-~d~~i~i~d~~~~--~~~~~~~~~- 303 (401)
T 4aez_A 236 -----GNDNVVQIWDA---RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT-MDKQIHFWNAATG--ARVNTVDAG- 303 (401)
T ss_dssp -----ETTSCEEEEET---TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT-TTCEEEEEETTTC--CEEEEEECS-
T ss_pred -----eCCCeEEEccC---CCCCccEEecCCcceEEEEEECCCCCCEEEEecCC-CCCEEEEEECCCC--CEEEEEeCC-
Confidence 44568999996 33333 33455667788899999998887765311 1126777787765 333333222
Q ss_pred ccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeec
Q 002209 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALM 583 (953)
Q Consensus 504 ~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 583 (953)
..+.. +.|+|+|+.++..... ....+++||+.+++...+....+..
T Consensus 304 ~~v~~------~~~s~~~~~l~~~~g~-------------------~dg~i~v~~~~~~~~~~~~~~~~h~--------- 349 (401)
T 4aez_A 304 SQVTS------LIWSPHSKEIMSTHGF-------------------PDNNLSIWSYSSSGLTKQVDIPAHD--------- 349 (401)
T ss_dssp SCEEE------EEECSSSSEEEEEECT-------------------TTCEEEEEEEETTEEEEEEEEECCS---------
T ss_pred CcEEE------EEECCCCCeEEEEeec-------------------CCCcEEEEecCCccceeEEEecCCC---------
Confidence 12222 7899999998876411 1224999999887666554322110
Q ss_pred cCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002209 584 SDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (953)
Q Consensus 584 ~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~ 621 (953)
..-...+|+|||+.++.... -..+.++++.+++.
T Consensus 350 ~~v~~~~~s~dg~~l~s~~~----dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 350 TRVLYSALSPDGRILSTAAS----DENLKFWRVYDGDH 383 (401)
T ss_dssp SCCCEEEECTTSSEEEEECT----TSEEEEEECCC---
T ss_pred CCEEEEEECCCCCEEEEEeC----CCcEEEEECCCCcc
Confidence 00112468999987764332 24688999877754
No 316
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.43 E-value=1.1e-12 Score=137.99 Aligned_cols=210 Identities=15% Similarity=0.101 Sum_probs=126.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCC
Q 002209 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (953)
Q Consensus 648 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G 727 (953)
+|.+++...+-+++ .|+||++||.+... ..|. .....| +++|.|+++ +.+|+|
T Consensus 7 ~g~~l~~~~~g~~~--------~~~vv~lHG~~~~~-----------~~~~----~~~~~L-~~~~~v~~~---D~~G~G 59 (264)
T 3ibt_A 7 NGTLMTYSESGDPH--------APTLFLLSGWCQDH-----------RLFK----NLAPLL-ARDFHVICP---DWRGHD 59 (264)
T ss_dssp TTEECCEEEESCSS--------SCEEEEECCTTCCG-----------GGGT----THHHHH-TTTSEEEEE---CCTTCS
T ss_pred CCeEEEEEEeCCCC--------CCeEEEEcCCCCcH-----------hHHH----HHHHHH-HhcCcEEEE---ccccCC
Confidence 67777766654321 57899999964221 1121 233444 456999994 556777
Q ss_pred Chhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCcccEEEEcccCCCCCC------
Q 002209 728 DEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL------ 798 (953)
Q Consensus 728 ~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~d~~~------ 798 (953)
.+... ........+|+.++++.+ +.+++.|+||||||.+++.++.++ |++++++|++++......
T Consensus 60 ~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~ 133 (264)
T 3ibt_A 60 AKQTDSGDFDSQTLAQDLLAFIDAK------GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQL 133 (264)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchh
Confidence 77542 223566677777766654 335899999999999999999999 999999999987651000
Q ss_pred ----CCcCcc------------cc-cch---------------hhhh-HHHHH-----hcCcccccCCCCCcEEEEEeCC
Q 002209 799 ----TPFGFQ------------NE-DRT---------------LWEA-TSTYV-----EMSPFMSANKLKKPILLVHGEE 840 (953)
Q Consensus 799 ----~~~~~~------------~~-~~~---------------~~~~-~~~~~-----~~sp~~~~~~i~~P~Li~~G~~ 840 (953)
....+. .. ... .|.. ...+. ..++...+.++++|+|++||..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~ 213 (264)
T 3ibt_A 134 AEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYS 213 (264)
T ss_dssp HHTTCTTTHHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEEC
T ss_pred hcccChhhHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecC
Confidence 000000 00 000 0000 00000 0112255678899999998755
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 841 DNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 841 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
|...+.+......+.+. -...++++++++||... .+..+.+.+.+.+||+
T Consensus 214 ~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 214 QPLSQDYRQLQLEFAAG----HSWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp CSCCHHHHHHHHHHHHH----CTTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred CccchhhHHHHHHHHHh----CCCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 54432113333444333 23469999999999753 5566777788888864
No 317
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.43 E-value=7.4e-13 Score=142.14 Aligned_cols=209 Identities=14% Similarity=0.083 Sum_probs=130.0
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCC
Q 002209 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (953)
Q Consensus 645 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~ 724 (953)
...+|..++...+- ..|+||++||++... ..|. .....|+++ |.|+++ +.+
T Consensus 15 ~~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~-----------~~~~----~~~~~L~~~-~~vi~~---D~~ 65 (301)
T 3kda_A 15 REVDGVKLHYVKGG----------QGPLVMLVHGFGQTW-----------YEWH----QLMPELAKR-FTVIAP---DLP 65 (301)
T ss_dssp EEETTEEEEEEEEE----------SSSEEEEECCTTCCG-----------GGGT----TTHHHHTTT-SEEEEE---CCT
T ss_pred EeeCCeEEEEEEcC----------CCCEEEEECCCCcch-----------hHHH----HHHHHHHhc-CeEEEE---cCC
Confidence 33488888866652 147899999964221 1121 234456666 999994 456
Q ss_pred CCCChhhh--hhhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC-
Q 002209 725 GEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSK-IAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP- 800 (953)
Q Consensus 725 G~G~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~- 800 (953)
|+|.+... ........+|+.++++.+ +.++ +.|+||||||.+++.++.++|++++++|++++........
T Consensus 66 G~G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 139 (301)
T 3kda_A 66 GLGQSEPPKTGYSGEQVAVYLHKLARQF------SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYR 139 (301)
T ss_dssp TSTTCCCCSSCSSHHHHHHHHHHHHHHH------CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGG
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHc------CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccc
Confidence 77777543 223566777777777765 2345 9999999999999999999999999999998753210000
Q ss_pred ------------cCc------cccc------------chh---------h---hhHHHHH--------------------
Q 002209 801 ------------FGF------QNED------------RTL---------W---EATSTYV-------------------- 818 (953)
Q Consensus 801 ------------~~~------~~~~------------~~~---------~---~~~~~~~-------------------- 818 (953)
+.+ .... ... + +..+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (301)
T 3kda_A 140 FPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALN 219 (301)
T ss_dssp SBSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHH
T ss_pred hhhhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhc
Confidence 000 0000 000 0 0000000
Q ss_pred -----hcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHH
Q 002209 819 -----EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRW 893 (953)
Q Consensus 819 -----~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 893 (953)
.......+.++++|+|+++|++| ++ ......+. ..-..+++++++++||.. ..+..+.+.+.|.+|
T Consensus 220 ~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~--~~~~~~~~----~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~~ 290 (301)
T 3kda_A 220 ESVRQNAELAKTRLQMPTMTLAGGGAGG--MG--TFQLEQMK----AYAEDVEGHVLPGCGHWL-PEECAAPMNRLVIDF 290 (301)
T ss_dssp HHHHHHHHHTTSCBCSCEEEEEECSTTS--CT--THHHHHHH----TTBSSEEEEEETTCCSCH-HHHTHHHHHHHHHHH
T ss_pred cchhhcccchhhccccCcceEEEecCCC--CC--hhHHHHHH----hhcccCeEEEcCCCCcCc-hhhCHHHHHHHHHHH
Confidence 00011122378999999999999 54 55555543 333457999999999986 356677777777777
Q ss_pred HHHh
Q 002209 894 LQKY 897 (953)
Q Consensus 894 l~~~ 897 (953)
+++.
T Consensus 291 l~~~ 294 (301)
T 3kda_A 291 LSRG 294 (301)
T ss_dssp HTTS
T ss_pred HhhC
Confidence 7653
No 318
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.42 E-value=2.4e-11 Score=132.96 Aligned_cols=245 Identities=8% Similarity=0.041 Sum_probs=155.2
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc----eeecccCCCccccccccceEEecCCe-EEEEEec
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNST-LLVCTIP 263 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~~~~wspDg~-~l~~~~~ 263 (953)
..+...+|+|||+.|+.... ...|+++++++++ ...+..+.. .+..++|+|||+ .|+...
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~---------d~~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~- 76 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSW---------DGSLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGT- 76 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEET---------TSEEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEE-
T ss_pred CcEEEEEEcCCCCEEEEEcC---------CCeEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEc-
Confidence 46889999999999988652 4567777777766 444443332 277899999999 888661
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc--CCceeEeCC--C-Ccccccc
Q 002209 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIGP--P-AVYTSLD 338 (953)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~--~g~~~~l~~--~-~~~~~~~ 338 (953)
..+.|.++++ +++...+.. . ..+..++
T Consensus 77 ------------------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 77 ------------------------------------------------VQGEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp ------------------------------------------------TTSCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred ------------------------------------------------CCCeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 1245667776 345566655 5 7788999
Q ss_pred cCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC---------ceEEEeccCCCcccCCccccccccCccceeeccC
Q 002209 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG---------IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (953)
Q Consensus 339 ~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g---------~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspD 409 (953)
|+| ++.|+..+.+ +.|.+||+.. +.. +.... ....+..++|+||
T Consensus 109 ~~~-~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~--~~~~~-----------~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 109 KYG-DDKLIAASWD-------------GLIEVIDPRNYGDGVIAVKNLN--SNNTK-----------VKNKIFTMDTNSS 161 (342)
T ss_dssp EET-TTEEEEEETT-------------SEEEEECHHHHTTBCEEEEESC--SSSSS-----------SCCCEEEEEECSS
T ss_pred eCC-CCEEEEEcCC-------------CeEEEEcccccccccccccCCe--eeEEe-----------eCCceEEEEecCC
Confidence 999 9888887744 3899999874 211 11111 1134567899998
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEecCCCC-CCC-ce-EEeecccccCCeeecc-CCceEEEEEecccCceEEEE
Q 002209 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEG-PE-ILHKLDLRYGGISWCD-DSLALVYESWYKTRRTRTWV 485 (953)
Q Consensus 410 g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-g~~-~~-~l~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~l~~ 485 (953)
+ ++.. ...+.|.+|++ .. +.. .. ........+..+.|+| ||+.|+....++ ..++|.
T Consensus 162 ~--l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg--~i~i~~ 222 (342)
T 1yfq_A 162 R--LIVG-------------MNNSQVQWFRL--PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG--RVAVEF 222 (342)
T ss_dssp E--EEEE-------------ESTTEEEEEES--SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS--EEEEEE
T ss_pred c--EEEE-------------eCCCeEEEEEC--CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC--cEEEEE
Confidence 8 4433 33558999996 22 222 22 2233455677899999 999888876543 236666
Q ss_pred EcCCCCC--CCcEEeecCCCc---------cccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeE
Q 002209 486 ISPGSKD--VAPRILFDRSSE---------DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (953)
Q Consensus 486 ~d~~~~~--~~~~~~~~~~~~---------~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 554 (953)
++..+.. .+.......... .+.. +.|+|||++|+....+ ..|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~s~~~~~l~~~~~d---------------------g~i 275 (342)
T 1yfq_A 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS------IEFSPRHKFLYTAGSD---------------------GII 275 (342)
T ss_dssp CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE------EEECTTTCCEEEEETT---------------------SCE
T ss_pred EcCCCcccccccceeeecccccccccccceeEEE------EEEcCCCCEEEEecCC---------------------ceE
Confidence 6654100 122222222211 2222 7899999998876632 149
Q ss_pred EEEECCCCceEEEec
Q 002209 555 DLFDINTGSKERIWE 569 (953)
Q Consensus 555 ~~~d~~~~~~~~l~~ 569 (953)
++||+.+++......
T Consensus 276 ~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 276 SCWNLQTRKKIKNFA 290 (342)
T ss_dssp EEEETTTTEEEEECC
T ss_pred EEEcCccHhHhhhhh
Confidence 999999887655443
No 319
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.41 E-value=3.3e-11 Score=135.27 Aligned_cols=298 Identities=12% Similarity=0.018 Sum_probs=175.0
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeec----
Q 002209 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQG---- 184 (953)
Q Consensus 110 ~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~---- 184 (953)
.+..++||| ||++|+....+ +.|.+|++.. +..........
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~d---------------------------------g~i~iw~~~~-~~~~~~~~~~~~~~~ 90 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSD---------------------------------GVIVLYDLEN-SSRQSYYTCKAVCSI 90 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETT---------------------------------SCEEEEECCC-CSSSSCEEECEEEEE
T ss_pred cEEEEEEecCCCCEEEEEcCC---------------------------------CeEEEEECCC-CcccceEeccccccc
Confidence 567889999 99999998775 3678999854 21111111000
Q ss_pred -----CCCCCcccceEecc-CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC---C
Q 002209 185 -----FPDGAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN---S 255 (953)
Q Consensus 185 -----~~~~~~~~~~~wSP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD---g 255 (953)
......+....|+| +++.|+... ....|.++++.+++.......... +..+.|+|. +
T Consensus 91 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 156 (408)
T 4a11_B 91 GRDHPDVHRYSVETVQWYPHDTGMFTSSS---------FDKTLKVWDTNTLQTADVFNFEET-----VYSHHMSPVSTKH 156 (408)
T ss_dssp CTTCTTCCSSCEEEEEECTTCTTCEEEEE---------TTSEEEEEETTTTEEEEEEECSSC-----EEEEEECSSCSSC
T ss_pred cccccccCCCcEEEEEEccCCCcEEEEEe---------CCCeEEEeeCCCCccceeccCCCc-----eeeeEeecCCCCC
Confidence 01234788999999 666666644 256888999998887665544332 557778874 4
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEeCCC-C
Q 002209 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-A 332 (953)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~ 332 (953)
..|+... ..+.|.++++ +++ ...+... .
T Consensus 157 ~~~~~~~-------------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~ 187 (408)
T 4a11_B 157 CLVAVGT-------------------------------------------------RGPKVQLCDLKSGSCSHILQGHRQ 187 (408)
T ss_dssp CEEEEEE-------------------------------------------------SSSSEEEEESSSSCCCEEECCCCS
T ss_pred cEEEEEc-------------------------------------------------CCCeEEEEeCCCcceeeeecCCCC
Confidence 4676551 2346778888 664 4444444 7
Q ss_pred cccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce--EEEeccCCCcc--cCCccccccccCccceeecc
Q 002209 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAE--DIPIAFNSVRKGMRSINWRS 408 (953)
Q Consensus 333 ~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~--~~~l~~~~~~~--~~p~~~~~~~~~~~~~~wsp 408 (953)
.+..++|+|||++++++... .+.|.+||+..+. ...+....... ............+..++|+|
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASA------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp CEEEEEECSSCTTEEEEEET------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cEEEEEECCCCCcEEEEEcC------------CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 78899999999975544422 2389999997432 22222211110 01111123334567899999
Q ss_pred CCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE-Eeec----ccccCCeeec-cCCceEEEEEecccCceE
Q 002209 409 DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKL----DLRYGGISWC-DDSLALVYESWYKTRRTR 482 (953)
Q Consensus 409 Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~-l~~~----~~~~~~~~~S-pDg~~l~~~~~~~~~~~~ 482 (953)
||+.++.. +..+.+.+|++ ..++... +... ........++ ..+..+++...++ .
T Consensus 256 ~~~~l~~~-------------~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 315 (408)
T 4a11_B 256 DGLHLLTV-------------GTDNRMRLWNS---SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS----T 315 (408)
T ss_dssp TSSEEEEE-------------ETTSCEEEEET---TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT----E
T ss_pred CCCEEEEe-------------cCCCeEEEEEC---CCCccceeccccccccccccceeEEecCCCceEEEEecCC----E
Confidence 99977665 44567899996 3333221 1111 0111112222 3345566655443 6
Q ss_pred EEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002209 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (953)
Q Consensus 483 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~ 562 (953)
+.+++..++ +...........+.. +.|+|||++|+....+. .|++||+.++
T Consensus 316 i~v~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~dg---------------------~i~iw~~~~~ 366 (408)
T 4a11_B 316 IAVYTVYSG--EQITMLKGHYKTVDC------CVFQSNFQELYSGSRDC---------------------NILAWVPSLY 366 (408)
T ss_dssp EEEEETTTC--CEEEEECCCSSCEEE------EEEETTTTEEEEEETTS---------------------CEEEEEECC-
T ss_pred EEEEECcCC--cceeeeccCCCeEEE------EEEcCCCCEEEEECCCC---------------------eEEEEeCCCC
Confidence 777787764 334444434333333 78999999988776322 3999999877
Q ss_pred ceE
Q 002209 563 SKE 565 (953)
Q Consensus 563 ~~~ 565 (953)
+..
T Consensus 367 ~~~ 369 (408)
T 4a11_B 367 EPV 369 (408)
T ss_dssp ---
T ss_pred Ccc
Confidence 643
No 320
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.6e-11 Score=134.04 Aligned_cols=269 Identities=9% Similarity=0.033 Sum_probs=147.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||| .||..+.+ +.|.+|++..+. ......+....+..
T Consensus 16 ~v~~~~~s~~--~las~~~D---------------------------------~~i~lw~~~~~~-~~~~~~~~~~~h~~ 59 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTD---------------------------------RKIKLVSVKYDD-FTLIDVLDETAHKK 59 (330)
T ss_dssp CEEEEEEETT--EEEEEESS---------------------------------SCEEEEECSSSC-CEEEEEECTTCCCS
T ss_pred ceeeeccCCC--EEEEEcCC---------------------------------CEEEEEEecCCC-eEEEEEEecCCccC
Confidence 4667888988 77776654 367999985311 11111221111234
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCC-------cee-ecccCCCccccccccceEEecCCeEEEEE
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-------KAR-PLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g-------~~~-~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 261 (953)
.+...+|+|||+.|+.... ...|.+++++.+ +.. .+..+.. .+..++|+|||+.|+..
T Consensus 60 ~v~~v~~sp~~~~las~s~---------D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~sp~g~~las~ 125 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSF---------DSTVSIWAKEESADRTFEMDLLAIIEGHEN-----EVKGVAWSNDGYYLATC 125 (330)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSCEEEEEC-------CCCEEEEEEC---------CEEEEEECTTSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEeC---------CCcEEEEEcccCcCccccceeEEEEcCCCC-----cEEEEEECCCCCEEEEE
Confidence 6889999999998887552 345666666432 111 1222222 27789999999999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C-Cc----eeEeCCC-Ccc
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-GT----VKEIGPP-AVY 334 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~-g~----~~~l~~~-~~~ 334 (953)
. ..+.|.++|+ . +. ...+... ..+
T Consensus 126 s-------------------------------------------------~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 126 S-------------------------------------------------RDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp E-------------------------------------------------TTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred e-------------------------------------------------CCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 2 1134555565 2 21 2233444 678
Q ss_pred cccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC--C
Q 002209 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP--S 412 (953)
Q Consensus 335 ~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~--~ 412 (953)
..++|+|||+.|+..+.+. .|.+|++..+..+.+.... +....+..++|+||+. .
T Consensus 157 ~~v~~~p~~~~l~s~s~D~-------------~i~iW~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDD-------------TVRIWKDYDDDWECVAVLN----------GHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp EEEEECSSSSEEEEEETTS-------------CEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECCSSSSCE
T ss_pred EEEEECCCCCEEEEEcCCC-------------eEEEEECCCCCeeEEEEcc----------CCCCcEEEEEecCCCCeeE
Confidence 8999999999998887443 8999998755333222211 1113456789999943 3
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEecCCCCCCC----c--eE---Eee-cccccCCeeeccCCceEEEEEecccCceE
Q 002209 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----P--EI---LHK-LDLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~----~--~~---l~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
++-. +....|.+|++ .++. . .. +.. +...+..++|++++ .|+..+.++ ..+
T Consensus 214 l~s~-------------s~D~~v~iw~~---~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg--~v~ 274 (330)
T 2hes_X 214 LCSG-------------SDDSTVRVWKY---MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADG--VLA 274 (330)
T ss_dssp EEEE-------------ETTSCEEEEEE---EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTS--CEE
T ss_pred EEEE-------------eCCCeEEEEEe---cCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCC--EEE
Confidence 3322 33456777775 2110 0 11 111 34556778999776 566555433 236
Q ss_pred EEEEcCCCCCCCcEEe---ecCCCc-cccCCCCCCCeEecc--CCCEEEEEee
Q 002209 483 TWVISPGSKDVAPRIL---FDRSSE-DVYSDPGSPMMRRTS--TGTYVIAKIK 529 (953)
Q Consensus 483 l~~~d~~~~~~~~~~~---~~~~~~-~~~~~~~~p~~~~Sp--DG~~l~~~~~ 529 (953)
||... ++ +...+ ...... .+.. +.|+| ||+.|+....
T Consensus 275 iw~~~--~~--~~~~~~~~~~~h~~~~v~~------v~~~~~~~~~~las~s~ 317 (330)
T 2hes_X 275 VYEEV--DG--EWKVFAKRALCHGVYEINV------VKWLELNGKTILATGGD 317 (330)
T ss_dssp EEEEE--TT--EEEEEEEESCTTTTSCEEE------EEEC-----CCEEEEET
T ss_pred EEEcC--CC--ceEEEeccccccccceEEE------EEEecCCCceEEEEecC
Confidence 66554 32 11111 111111 2222 67999 7888887763
No 321
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.41 E-value=2.9e-11 Score=134.03 Aligned_cols=273 Identities=9% Similarity=-0.023 Sum_probs=138.7
Q ss_pred ceEEEEccCCCCCCceeeeecC--CCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECC-CCceeecccCCCc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGF--PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD-TGKARPLFQSPDI 240 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~--~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~-~g~~~~lt~~~~~ 240 (953)
.|+++++..+. ++.+.+... .....+...+|||||++|+.... . .|.+++++ +|+..++...+..
T Consensus 15 ~i~~~~~d~~~--g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~---------~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 15 AIFTVQFDDEK--LTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM---------K-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEEEETTT--TEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB---------T-EEEEEEEEETTEEEEEEEEECC
T ss_pred cEEEEEEECCC--CCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc---------c-eEEEEEECCCCCEEEeeEeecC
Confidence 46776663221 333333221 12225778999999998876442 1 67777765 6666544322110
Q ss_pred cccccccceEEecCCeEE-EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 241 YLNAIFDNFVWVNNSTLL-VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 241 ~~~~~~~~~~wspDg~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
. ....++|+|||+.| +++.. .... ..+.+ +. +...+.+.++
T Consensus 83 g---~~~~~~~spdg~~l~~~~~~-~~~~-----------~~~~~-----------------~~------~~~~g~v~v~ 124 (365)
T 1jof_A 83 G---HPRANDADTNTRAIFLLAAK-QPPY-----------AVYAN-----------------PF------YKFAGYGNVF 124 (365)
T ss_dssp S---SGGGGCTTSCCEEEEEEECS-STTC-----------CEEEE-----------------EE------SSSCCEEEEE
T ss_pred C---CCccEEECCCCCEEEEEEec-CCcc-----------eeccc-----------------ee------ecCCceEEEE
Confidence 0 13468899999964 33311 0000 00000 00 0011234444
Q ss_pred Ec--CCcee-EeC-----CCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc-CceEEEeccCCCcccC
Q 002209 320 SL--DGTVK-EIG-----PPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDI 390 (953)
Q Consensus 320 ~~--~g~~~-~l~-----~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~-g~~~~~l~~~~~~~~~ 390 (953)
++ +|+.. .+. ....+..++|||||++|+++... ...|++|+++ +++.+.+......
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~--- 189 (365)
T 1jof_A 125 SVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT------------ANKLWTHRKLASGEVELVGSVDAP--- 189 (365)
T ss_dssp EECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTSCEEEEEEEECS---
T ss_pred ccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC------------CCEEEEEEECCCCCEEEeeeEecC---
Confidence 44 45432 222 12566788999999988765421 2379999998 5655433221100
Q ss_pred CccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCce----EEeecc------c----
Q 002209 391 PIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE----ILHKLD------L---- 456 (953)
Q Consensus 391 p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~----~l~~~~------~---- 456 (953)
....+++.++|||||+.++.. .. ..+.+.+++.+. ..++.. .+.... .
T Consensus 190 -----~~g~~p~~~~~spdg~~l~v~-~~-----------~~~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~ 251 (365)
T 1jof_A 190 -----DPGDHPRWVAMHPTGNYLYAL-ME-----------AGNRICEYVIDP-ATHMPVYTHHSFPLIPPGIPDRDPETG 251 (365)
T ss_dssp -----STTCCEEEEEECTTSSEEEEE-ET-----------TTTEEEEEEECT-TTCCEEEEEEEEESSCTTCCCBCTTTS
T ss_pred -----CCCCCCCEeEECCCCCEEEEE-EC-----------CCCeEEEEEEeC-CCCcEEEccceEEcCCCCcCCcccccc
Confidence 001345789999999976554 11 123555555311 233322 121111 1
Q ss_pred ---ccCCee-eccCCceEEEEEeccc----CceEEEEEcCCCCCCCcEEe---ecCCCccccCCCCCCCeEecc---CCC
Q 002209 457 ---RYGGIS-WCDDSLALVYESWYKT----RRTRTWVISPGSKDVAPRIL---FDRSSEDVYSDPGSPMMRRTS---TGT 522 (953)
Q Consensus 457 ---~~~~~~-~SpDg~~l~~~~~~~~----~~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~Sp---DG~ 522 (953)
....++ |||||++|+.+..... ....+|.++. ++ +...+ .......... +.||| ||+
T Consensus 252 ~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g--~~~~~~~~~~~~~~~~~~------~a~sp~~~dg~ 322 (365)
T 1jof_A 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CG--SIEKQLFLSPTPTSGGHS------NAVSPCPWSDE 322 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TS--CEEEEEEEEECSSCCTTC------CCEEECTTCTT
T ss_pred cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CC--CEEEeeeeeecCCCCccc------ceecCCCcCCC
Confidence 245688 9999999876543321 1345666653 32 33321 1111111111 67899 899
Q ss_pred EEEEEe
Q 002209 523 YVIAKI 528 (953)
Q Consensus 523 ~l~~~~ 528 (953)
+|+...
T Consensus 323 ~l~v~~ 328 (365)
T 1jof_A 323 WMAITD 328 (365)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 988765
No 322
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.6e-11 Score=140.26 Aligned_cols=258 Identities=9% Similarity=0.025 Sum_probs=148.5
Q ss_pred CCCCCceecCCC---------CEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCce
Q 002209 109 PPLPALSFSPQR---------DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE 179 (953)
Q Consensus 109 ~~~~~~~~SPDG---------~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~ 179 (953)
..+..++|+|++ ++||........ . ..+++.......+.++.|.||++.+ +.....
T Consensus 134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------~--------~~~~~~~~laS~s~D~tI~iWd~~~-~~~~~~ 198 (524)
T 2j04_B 134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------E--------PLNEHLEMFDKEKHSSCIQIFKMNT-STLHCV 198 (524)
T ss_dssp C--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------CEEEEEEEEET-TTCCEE
T ss_pred CceeEEEecccCCCCccCcCCeEEEEEEecccC------C--------ccchhhhhhccCCCCceEEEEEccC-CCCCce
Confidence 357889999998 788887754110 0 0112222223334456789999854 221111
Q ss_pred --eeeecCCCCCcccceEeccC------CCeEEEEEeeccccCCCCcceEEEEECCCCcee------------ecccCCC
Q 002209 180 --IEIQGFPDGAKLNFVTWSQD------GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR------------PLFQSPD 239 (953)
Q Consensus 180 --~~l~~~~~~~~~~~~~wSPD------G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~------------~lt~~~~ 239 (953)
..+... ...+...+|+|+ ++.||.... ...|.++++.+++.. .+..+.
T Consensus 199 ~~~~l~~~--~~~V~~v~wsp~~~~~~~~~~LAs~s~---------DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~- 266 (524)
T 2j04_B 199 KVQTIVHS--FGEVWDLKWHEGCHAPHLVGCLSFVSQ---------EGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD- 266 (524)
T ss_dssp EEEEEEEC--CCSEEEEEECSSCCCSSSSCEEEEEET---------TSCEEEEECCCCSSSSSEEECCCSCSEEECCTT-
T ss_pred EEEEEEec--CCcEEEEEECCCCCCCCCCceEEEEec---------CCeEEEEEcCCCccccccceeecCceEEEEcCC-
Confidence 122221 235888999997 567776542 446667777665321 111111
Q ss_pred ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 240 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
..+..++|++++ .|+... ..+.|.++
T Consensus 267 ----~~v~sv~~s~~~-~lasgs-------------------------------------------------~DgtV~lW 292 (524)
T 2j04_B 267 ----SLITTFDFLSPT-TVVCGF-------------------------------------------------KNGFVAEF 292 (524)
T ss_dssp ----TCEEEEEESSSS-EEEEEE-------------------------------------------------TTSEEEEE
T ss_pred ----CCEEEEEecCCC-eEEEEe-------------------------------------------------CCCEEEEE
Confidence 226789999876 565441 23467777
Q ss_pred Ec-CCc-e-eEeCCC-Cccccc--ccCCCC-cEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCC
Q 002209 320 SL-DGT-V-KEIGPP-AVYTSL--DPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIP 391 (953)
Q Consensus 320 ~~-~g~-~-~~l~~~-~~~~~~--~~SpDG-~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p 391 (953)
|+ ++. . ..+... ..+.++ .|+||| +.||..+.+. .|.+||+.... .+.+..+...
T Consensus 293 D~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~-------------tvklWD~~~~~~~~~~~~~~~~---- 355 (524)
T 2j04_B 293 DLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG-------------YFYIFNPKDIATTKTTVSRFRG---- 355 (524)
T ss_dssp ETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS-------------EEEEECGGGHHHHCEEEEECSC----
T ss_pred ECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC-------------eEEEEECCCCCccccccccccc----
Confidence 88 553 2 223333 667777 689999 7777766443 89999997533 2222211100
Q ss_pred ccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEE
Q 002209 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALV 471 (953)
Q Consensus 392 ~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~ 471 (953)
..+..++|+|||+.++.. +..+.+.+||+ ..+.....+..+...+..++|||||+.|+
T Consensus 356 -------~~v~~v~fsp~~~~l~s~-------------~~d~tv~lwd~--~~~~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 356 -------SNLVPVVYCPQIYSYIYS-------------DGASSLRAVPS--RAAFAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp -------CSCCCEEEETTTTEEEEE-------------CSSSEEEEEET--TCTTCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred -------CcccceEeCCCcCeEEEe-------------CCCCcEEEEEC--cccccceeeecCCCceEEEEeCCCCCeEE
Confidence 124578999999875544 34557889996 33444466777888889999999999988
Q ss_pred EEEecccCceEEEEEcCCC
Q 002209 472 YESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 472 ~~~~~~~~~~~l~~~d~~~ 490 (953)
.++.++ .+.++++..
T Consensus 414 Sgs~Dg----tv~lwd~~~ 428 (524)
T 2j04_B 414 AGSADG----SLIITNAAR 428 (524)
T ss_dssp EEETTT----EEECCBSCS
T ss_pred EEECCC----EEEEEechH
Confidence 776554 344445543
No 323
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.40 E-value=8e-12 Score=135.48 Aligned_cols=247 Identities=13% Similarity=0.199 Sum_probs=148.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++||..+.+ +.|.|||+.. +.......+.++. .
T Consensus 15 ~V~~v~~s~~g~~lasgs~D---------------------------------~~v~lwd~~~-~~~~~~~~l~gH~--~ 58 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSD---------------------------------RSVKIFDVRN-GGQILIADLRGHE--G 58 (316)
T ss_dssp CEEEEEECGGGCEEEEEETT---------------------------------TEEEEEEEET-TEEEEEEEEECCS--S
T ss_pred eEEEeeEcCCCCEEEEEeCC---------------------------------CeEEEEEecC-CCcEEEEEEcCCC--c
Confidence 56788999999999998875 3679999854 1000112333332 4
Q ss_pred cccceEecc--CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC--CeEEEEEecCC
Q 002209 190 KLNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPLL 265 (953)
Q Consensus 190 ~~~~~~wSP--DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~~~ 265 (953)
.+....|+| +|+.|+..+ ....|.++|+++++...+..... ....+..++|+|| |..|+...
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s---------~D~~v~iWd~~~~~~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs--- 124 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCS---------YDRKVIIWREENGTWEKSHEHAG--HDSSVNSVCWAPHDYGLILACGS--- 124 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEE---------TTSCEEEECCSSSCCCEEEEECC--CSSCCCEEEECCTTTCSCEEEEC---
T ss_pred cEEEEEeCCCCCCCEEEEEE---------CCCEEEEEECCCCcceEEEEccC--CCCceEEEEECCCCCCcEEEEEc---
Confidence 688999986 488888754 24567778887764322211111 1112778999998 77777651
Q ss_pred CCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-cee--Ee-CCC-Cccccccc
Q 002209 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVK--EI-GPP-AVYTSLDP 339 (953)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-~~~--~l-~~~-~~~~~~~~ 339 (953)
..+.|.++++ ++ ... .. ... ..+..++|
T Consensus 125 ----------------------------------------------~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 125 ----------------------------------------------SDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp ----------------------------------------------SSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred ----------------------------------------------CCCCEEEEecCCCCCcceeeeeccccCCcceEEE
Confidence 1134555566 33 221 11 222 56778899
Q ss_pred CCCC-----------------cEEEEEEecCCccccccCCCCCcceEEEeccCc-eEEEeccCCCcccCCccccccccCc
Q 002209 340 SPDE-----------------KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGM 401 (953)
Q Consensus 340 SpDG-----------------~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~ 401 (953)
+|++ ++|+..+. .+.|.+||+.++ ..+.+.... +....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-------------D~~v~lWd~~~~~~~~~~~~l~----------~h~~~V 215 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGC-------------DNLIKLWKEEEDGQWKEEQKLE----------AHSDWV 215 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBT-------------TSBCCEEEECTTSCEEEEECCB----------CCSSCE
T ss_pred ccccCCccccccccccCccccceEEEecC-------------CCeEEEEEeCCCCccceeeecc----------cCCCce
Confidence 9983 55554442 348999999743 222222211 122345
Q ss_pred cceeeccCC----CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC--ceEEeecccccCCeeeccCCceEEEEEe
Q 002209 402 RSINWRSDK----PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG--PEILHKLDLRYGGISWCDDSLALVYESW 475 (953)
Q Consensus 402 ~~~~wspDg----~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~--~~~l~~~~~~~~~~~~SpDg~~l~~~~~ 475 (953)
..++|+||+ +.|+-. +....|.+|+++....+. ...+......+..++|+|||+.|+..+.
T Consensus 216 ~~v~~sp~~~~~~~~las~-------------s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASC-------------SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp EEEECCCCSSCSCCEEEEE-------------ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred EEEEecCCCCCCCceEEEE-------------cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 789999997 434433 445678899861111111 2345555666788999999999988876
Q ss_pred cccCceEEEEEcCCC
Q 002209 476 YKTRRTRTWVISPGS 490 (953)
Q Consensus 476 ~~~~~~~l~~~d~~~ 490 (953)
++. .+||..+..+
T Consensus 283 D~~--v~lw~~~~~g 295 (316)
T 3bg1_A 283 DNK--VTLWKESVDG 295 (316)
T ss_dssp SSC--EEEEEECTTS
T ss_pred CCe--EEEEEECCCC
Confidence 543 4788776543
No 324
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.3e-11 Score=137.14 Aligned_cols=241 Identities=12% Similarity=0.142 Sum_probs=151.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCC-CC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~-~~ 188 (953)
.+..++|||||++||....+ +.|.||++.. ...+.+..+. +.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~iw~~~~----~~~~~~~~~~~h~ 55 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSD---------------------------------KTIKIFEVEG----ETHKLIDTLTGHE 55 (379)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SCEEEEEEET----TEEEEEEEECCCS
T ss_pred cEEEEEEcCCCCEEEEEECC---------------------------------CcEEEEecCC----CcceeeeEecCCC
Confidence 56788999999999988765 3678999842 1222222222 22
Q ss_pred CcccceEeccC--CCeEEEEEeeccccCCCCcceEEEEECCCCceeec--ccCCCccccccccceEEecC--CeEEEEEe
Q 002209 189 AKLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNN--STLLVCTI 262 (953)
Q Consensus 189 ~~~~~~~wSPD--G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l--t~~~~~~~~~~~~~~~wspD--g~~l~~~~ 262 (953)
..+..+.|+|+ |+.|+.... +..|.++|+++++...+ ...... .+..++|+|+ |+.|++..
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~~~~ 122 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSY---------DGKVLIWKEENGRWSQIAVHAVHSA----SVNSVQWAPHEYGPLLLVAS 122 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEET---------TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE
T ss_pred CcEEEEEeCCCCCCCEEEEecc---------CCEEEEEEcCCCceeEeeeecCCCc----ceEEEEeCCCCCCCEEEEec
Confidence 47889999988 888887542 45677777777752222 221221 2778999999 88888761
Q ss_pred cCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC---ceeEeCCC-Cccccc
Q 002209 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYTSL 337 (953)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g---~~~~l~~~-~~~~~~ 337 (953)
..+.|.++++ ++ ....+... ..+..+
T Consensus 123 -------------------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 123 -------------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp -------------------------------------------------TTSEEEEEECCTTSCCCEEEEECCTTCEEEE
T ss_pred -------------------------------------------------CCCcEEEEecCCCCceeeEEecCCCCceEEE
Confidence 2245667777 44 22233333 678889
Q ss_pred ccCC-------------CCcEEEEEEecCCccccccCCCCCcceEEEeccCce-E-EEeccCCCcccCCccccccccCcc
Q 002209 338 DPSP-------------DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-V-RELCDLPLAEDIPIAFNSVRKGMR 402 (953)
Q Consensus 338 ~~Sp-------------DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~-~~l~~~~~~~~~p~~~~~~~~~~~ 402 (953)
+|+| ||+.|+..+.+. .|.+||+..+. . ..+.... .....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-------------~i~i~d~~~~~~~~~~~~~~~----------~h~~~v~ 210 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGADN-------------LVKIWKYNSDAQTYVLESTLE----------GHSDWVR 210 (379)
T ss_dssp EECCCC----------CTTCEEEEEETTS-------------CEEEEEEETTTTEEEEEEEEC----------CCSSCEE
T ss_pred EEcCccccccccccCCCCCCEEEEEeCCC-------------eEEEEEecCCCcceeeEEEEe----------cccCcEe
Confidence 9999 799998887443 89999997432 1 1111111 1113456
Q ss_pred ceeeccC---CCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC--ceEEe---ecccccCCeeeccCCceEEEEE
Q 002209 403 SINWRSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG--PEILH---KLDLRYGGISWCDDSLALVYES 474 (953)
Q Consensus 403 ~~~wspD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~--~~~l~---~~~~~~~~~~~SpDg~~l~~~~ 474 (953)
.++|+|| ++.++.. +..+.+.+|++ ..+.. ...+. .....+..++|+|||+.|+...
T Consensus 211 ~~~~sp~~~~~~~l~s~-------------~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASV-------------SQDRTCIIWTQ--DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEEECCCCSSSEEEEEE-------------ETTSCEEEEEE--SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEECCCCCCCCeEEEE-------------eCCCEEEEEeC--CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 7999999 6655554 34557888886 22221 12221 1344566789999999998876
Q ss_pred ecccCceEEEEEcCC
Q 002209 475 WYKTRRTRTWVISPG 489 (953)
Q Consensus 475 ~~~~~~~~l~~~d~~ 489 (953)
.++ ..++|.++..
T Consensus 276 ~dg--~i~iw~~~~~ 288 (379)
T 3jrp_A 276 GDN--KVTLWKENLE 288 (379)
T ss_dssp SSS--SEEEEEEEET
T ss_pred CCC--cEEEEeCCCC
Confidence 643 3467777643
No 325
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.39 E-value=9.8e-11 Score=141.80 Aligned_cols=291 Identities=10% Similarity=0.035 Sum_probs=173.6
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc------eeecccCCCccccccccceEEecCCeEEEEEe
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK------ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~------~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~ 262 (953)
..+...+|+||+..++.+.. . ...|.++++..+. .+.+..+.. .+..++|+|||+.|+...
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s------~--D~~i~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSAS------R--DKSIILWKLTKDDKAYGVAQRRLTGHSH-----FVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEE------T--TSEEEEEECCCSTTCSCEEEEEEECCSS-----CEEEEEECTTSSEEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEe------C--CCcEEEEEccCCCcccccccceecCCCC-----cEEEEEECCCCCEEEEEe
Confidence 46889999998755554433 2 4466666665432 123333332 277899999999998661
Q ss_pred cCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEeCCC-Cccccccc
Q 002209 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDP 339 (953)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~ 339 (953)
..+.|.++|+ ++. .+.+... ..+..++|
T Consensus 450 -------------------------------------------------~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 450 -------------------------------------------------WDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp -------------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred -------------------------------------------------CCCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 2246778888 774 3444444 77889999
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~ 419 (953)
||||++|+..+.+. .|.+||+.+.....+..... ++...+..++|+|++..-.+.+.
T Consensus 481 s~~~~~l~s~s~D~-------------~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~l~s~- 537 (694)
T 3dm0_A 481 SLDNRQIVSASRDR-------------TIKLWNTLGECKYTISEGGE---------GHRDWVSCVRFSPNTLQPTIVSA- 537 (694)
T ss_dssp CTTSSCEEEEETTS-------------CEEEECTTSCEEEEECSSTT---------SCSSCEEEEEECSCSSSCEEEEE-
T ss_pred eCCCCEEEEEeCCC-------------EEEEEECCCCcceeeccCCC---------CCCCcEEEEEEeCCCCcceEEEE-
Confidence 99999999887443 89999987665444432111 12234567899999854222211
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
+..+.|.+||+ ..++. ..+..+...+..++|||||+.|+..+.++ .|.++|+.++ +....
T Consensus 538 ----------s~d~~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg----~i~iwd~~~~--~~~~~ 598 (694)
T 3dm0_A 538 ----------SWDKTVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG----VVLLWDLAEG--KKLYS 598 (694)
T ss_dssp ----------ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS----BCEEEETTTT--EEEEC
T ss_pred ----------eCCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC----eEEEEECCCC--ceEEE
Confidence 33557899996 33333 34556677788899999999988876554 3444455553 21111
Q ss_pred ecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~ 578 (953)
... ...+.. +.||||+.+|+.... ..+.+||+.+++.......+.......
T Consensus 599 ~~~-~~~v~~------~~~sp~~~~l~~~~~----------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~ 649 (694)
T 3dm0_A 599 LEA-NSVIHA------LCFSPNRYWLCAATE----------------------HGIKIWDLESKSIVEDLKVDLKAEAEK 649 (694)
T ss_dssp CBC-SSCEEE------EEECSSSSEEEEEET----------------------TEEEEEETTTTEEEEEECCCCC-----
T ss_pred ecC-CCcEEE------EEEcCCCcEEEEEcC----------------------CCEEEEECCCCCChhhhcccccccccc
Confidence 111 111222 789999988876541 138999998887655433221100000
Q ss_pred -----eEe---eccCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002209 579 -----TVA---LMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (953)
Q Consensus 579 -----~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~ 616 (953)
... ....-...+|||||+.|+..... ..|.+|++
T Consensus 650 ~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~D----g~i~iW~i 691 (694)
T 3dm0_A 650 ADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTD----GVIRVWGI 691 (694)
T ss_dssp -----------CCCCEEEEEECTTSSEEEEEETT----SEEEEEEC
T ss_pred ccccccccCCceeEEeeeEEEcCCCCEEEEEcCC----CeEEEEec
Confidence 000 00000124689999977643332 35777775
No 326
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.39 E-value=6e-12 Score=134.14 Aligned_cols=214 Identities=14% Similarity=0.069 Sum_probs=127.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCC-ccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPR-IGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 648 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
+|.+++...+-++. ...|+||++||.+..... .|.. +.......| +++|.|+.+|. +|+
T Consensus 19 ~~~~l~y~~~G~~~------~~~p~vvllHG~~~~~~~----------~~~~~~~~~~~~~L-~~~~~vi~~D~---~G~ 78 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK------PKRPAIFTYHDVGLNYKS----------CFQPLFRFGDMQEI-IQNFVRVHVDA---PGM 78 (286)
T ss_dssp TTEEEEEEEESCCC------TTCCEEEEECCTTCCHHH----------HHHHHHTSHHHHHH-HTTSCEEEEEC---TTT
T ss_pred CCeEEEEEeccCCC------CCCCeEEEeCCCCCCchh----------hhhhhhhhchhHHH-hcCCCEEEecC---CCC
Confidence 67788777664321 125889999995311000 0000 000023334 45799999555 566
Q ss_pred CChhh--hhh----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC
Q 002209 727 GDEEA--NDR----FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (953)
Q Consensus 727 G~~~~--~~~----~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~ 800 (953)
|.+.. ... .....++|+.++++.+ +.+++.|+||||||.+++.++..+|++++++|++++........
T Consensus 79 G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 152 (286)
T 2qmq_A 79 EEGAPVFPLGYQYPSLDQLADMIPCILQYL------NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM 152 (286)
T ss_dssp STTCCCCCTTCCCCCHHHHHHTHHHHHHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH
T ss_pred CCCCCCCCCCCCccCHHHHHHHHHHHHHHh------CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh
Confidence 55422 111 4566777777777665 23589999999999999999999999999999998854321100
Q ss_pred -c-------------------Cccccc----chhhhh-------------HHHHH----hcCc----ccccCCCCCcEEE
Q 002209 801 -F-------------------GFQNED----RTLWEA-------------TSTYV----EMSP----FMSANKLKKPILL 835 (953)
Q Consensus 801 -~-------------------~~~~~~----~~~~~~-------------~~~~~----~~sp----~~~~~~i~~P~Li 835 (953)
+ .+.... ....+. ...+. .... ...+.++++|+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 232 (286)
T 2qmq_A 153 DWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVML 232 (286)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEE
T ss_pred hhhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEE
Confidence 0 000000 000000 00010 0011 1245678999999
Q ss_pred EEeCCCCCCCCchHHHHHHHHHHHhCCC-cEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002209 836 VHGEEDNNSGTLTMQSDRFFNALKGHGA-LCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (953)
Q Consensus 836 ~~G~~D~~v~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 895 (953)
++|++|..+| .. .+.+++... .+++++++++||... .+....+.+.+.+||+
T Consensus 233 i~G~~D~~~~---~~----~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 233 VVGDQAPHED---AV----VECNSKLDPTQTSFLKMADSGGQPQ-LTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EEETTSTTHH---HH----HHHHHHSCGGGEEEEEETTCTTCHH-HHCHHHHHHHHHHHHC
T ss_pred EecCCCcccc---HH----HHHHHHhcCCCceEEEeCCCCCccc-ccChHHHHHHHHHHhc
Confidence 9999998864 22 233333333 589999999999863 4556777888888874
No 327
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=3e-11 Score=133.92 Aligned_cols=262 Identities=9% Similarity=-0.020 Sum_probs=138.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~ 189 (953)
.+..++|||||++|+.+..+ .|.+|++..+| +...+...+.+.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~----------------------------------~v~~~~~~~~g---~~~~~~~~~~~g 83 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK----------------------------------KWSSFAVKSPT---EIVHEASHPIGG 83 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT----------------------------------EEEEEEEEETT---EEEEEEEEECCS
T ss_pred CCcEEEECCCCCEEEEEccc----------------------------------eEEEEEECCCC---CEEEeeEeecCC
Confidence 45678999999988655541 46788874223 222222121112
Q ss_pred cccceEeccCCCe-EEEEEeecccc-CCC----CcceEEEEECC-CCcee-eccc---CCCccccccccceEEecCCeEE
Q 002209 190 KLNFVTWSQDGKH-LAFSIRIDAED-SSS----SKLRVWVADVD-TGKAR-PLFQ---SPDIYLNAIFDNFVWVNNSTLL 258 (953)
Q Consensus 190 ~~~~~~wSPDG~~-laf~~~~~~~~-~~~----~~~~l~~~d~~-~g~~~-~lt~---~~~~~~~~~~~~~~wspDg~~l 258 (953)
....++|||||++ ++++.+.+... ..+ ....+.+++++ .|+.. .+.. ..... ...++|+|||++|
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~spdG~~l 159 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTG----IHGMVFDPTETYL 159 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCC----EEEEEECTTSSEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCc----ceEEEECCCCCEE
Confidence 3566899999997 34543200000 000 12344555544 24432 2221 01111 5688999999988
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc--CCceeEe---C--C-
Q 002209 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEI---G--P- 330 (953)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~--~g~~~~l---~--~- 330 (953)
+++.. +...|+++++ +|+...+ . .
T Consensus 160 ~~~~~------------------------------------------------~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 160 YSADL------------------------------------------------TANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp EEEET------------------------------------------------TTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred EEEcC------------------------------------------------CCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 76510 2245777776 4654332 1 1
Q ss_pred CCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc--CceEE----EeccCCCcccCCcccccccc-----
Q 002209 331 PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD--GIFVR----ELCDLPLAEDIPIAFNSVRK----- 399 (953)
Q Consensus 331 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~--g~~~~----~l~~~~~~~~~p~~~~~~~~----- 399 (953)
......++|||||++|++.... .+.+.+|+.+ ++... .+...+.. +.+...
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~------------~~~v~v~~~~~~~g~~~~~~~~~~~~~~~------~~g~~~~~~~~ 253 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEA------------GNRICEYVIDPATHMPVYTHHSFPLIPPG------IPDRDPETGKG 253 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTTCCEEEEEEEEESSCTT------CCCBCTTTSSB
T ss_pred CCCCCEeEECCCCCEEEEEECC------------CCeEEEEEEeCCCCcEEEccceEEcCCCC------cCCcccccccc
Confidence 2456778999999999877532 2367777654 33322 22222210 000000
Q ss_pred -Ccccee-eccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe---e-cccccCCeeecc---CCceE
Q 002209 400 -GMRSIN-WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH---K-LDLRYGGISWCD---DSLAL 470 (953)
Q Consensus 400 -~~~~~~-wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~---~-~~~~~~~~~~Sp---Dg~~l 470 (953)
.+..++ |||||+.|+ ..++..+. ...+.|.++++ ...++...+. . .......++||| ||++|
T Consensus 254 ~~~~~i~~~spdG~~l~-v~~~~~~~------~~~~~i~v~~~--~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 254 LYRADVCALTFSGKYMF-ASSRANKF------ELQGYIAGFKL--RDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp SEEEEEEEECTTSSEEE-EEEEESST------TSCCEEEEEEE--CTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred cccccEEEECCCCCEEE-EECCCCCC------CCCCeEEEEEE--CCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 245789 999999764 43322110 01236777775 1234444321 1 233456789999 89998
Q ss_pred EEEEecccCceEEEEEcC
Q 002209 471 VYESWYKTRRTRTWVISP 488 (953)
Q Consensus 471 ~~~~~~~~~~~~l~~~d~ 488 (953)
+++...+ ....+|.++.
T Consensus 325 ~v~~~~~-~~v~v~~~~~ 341 (365)
T 1jof_A 325 AITDDQE-GWLEIYRWKD 341 (365)
T ss_dssp EEECSSS-CEEEEEEEET
T ss_pred EEEEcCC-CeEEEEEEch
Confidence 8775432 3235565553
No 328
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.38 E-value=9.1e-11 Score=145.42 Aligned_cols=110 Identities=10% Similarity=0.052 Sum_probs=66.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccc--------------------eeceEEecCCCC-CCcceeeeeceEEE
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEE--------------------KLAGLRIDGKCN-TRSRMSFYTGIGIH 168 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~-~~~~~~~~~~i~i~ 168 (953)
.+..++|||||++|+....++...++++..... .+..+.++|+.. .......++.| +|
T Consensus 100 ~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lW 178 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TY 178 (902)
T ss_dssp CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EE
T ss_pred CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EE
Confidence 567889999999999988775544444433221 123455555421 11212223567 99
Q ss_pred EccCCCCCCc-eeeeecC-----C----------C-CCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce
Q 002209 169 QLFPDGKLGQ-EIEIQGF-----P----------D-GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA 231 (953)
Q Consensus 169 ~~~~~g~~~~-~~~l~~~-----~----------~-~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~ 231 (953)
|+.. ++ .+.+... + . ...+....|||||++|+... .+..|.+||+.+|+.
T Consensus 179 d~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs---------~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 179 SLVE----NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH---------EDNSLVFWDANSGHM 245 (902)
T ss_dssp ETTT----TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE---------TTCCEEEEETTTCCE
T ss_pred ECCC----CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE---------CCCeEEEEECCCCcE
Confidence 9854 22 2222211 0 0 13578899999999998855 256788889988876
Q ss_pred ee
Q 002209 232 RP 233 (953)
Q Consensus 232 ~~ 233 (953)
..
T Consensus 246 ~~ 247 (902)
T 2oaj_A 246 IM 247 (902)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 329
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.38 E-value=5.7e-11 Score=131.04 Aligned_cols=241 Identities=11% Similarity=0.045 Sum_probs=140.4
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCC
Q 002209 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (953)
Q Consensus 109 ~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~ 188 (953)
..+..++|||||++||....+ .+.||++.. .........
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~----------------------------------~~~iw~~~~----~~~~~~~~~--- 58 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK----------------------------------SFEIYNVHP----VAHIMSQEM--- 58 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS----------------------------------EEEEEEETT----EEEEEEEEC---
T ss_pred CceEEEEECCCCCEEEEEcCC----------------------------------EEEEEecCC----cceeeeeec---
Confidence 368899999999999987653 457888743 222111111
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....|+++++.++.+.. +...|.++|..+++.......... +..+.|++++ +++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~--------~d~~v~iWd~~~~~~~~~~~~~~~-----v~~v~~~~~~--~~~~------- 116 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTG--------VKEVVHIWDDVKKQDVSRIKVDAP-----VKDLFLSREF--IVVS------- 116 (355)
T ss_dssp SCCCEEEECTTSSEEEEECS--------STTEEEEEETTTTEEEEEEECSSC-----EEEEEECSSE--EEEE-------
T ss_pred CCeEEEEEcCCCCEEEEEEC--------CccEEEEEECCCCcEEEEEECCCc-----eEEEEEcCCE--EEEE-------
Confidence 13677889999999887542 234899999988876543333321 6678888765 3322
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-c-eeEeCCCCcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-T-VKEIGPPAVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-~-~~~l~~~~~~~~~~~SpDG~~ 345 (953)
....|.++++ ++ + ...+.. .....++++ +.
T Consensus 117 -------------------------------------------~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~ 149 (355)
T 3vu4_A 117 -------------------------------------------YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GL 149 (355)
T ss_dssp -------------------------------------------ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TE
T ss_pred -------------------------------------------EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cE
Confidence 1235677787 54 2 221111 222345666 67
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCC--CcccCC--ccccccccCccceeeccCCCCceEEEEecc
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP--LAEDIP--IAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~--~~~~~p--~~~~~~~~~~~~~~wspDg~~i~~~~~~~~ 421 (953)
+++.+.. ..+.|.+||+..+......... .....| ..+.+....+..++|+|||+.++-.
T Consensus 150 la~~sg~-----------~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~----- 213 (355)
T 3vu4_A 150 LVYSNEF-----------NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC----- 213 (355)
T ss_dssp EEEEESS-----------CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE-----
T ss_pred EEEeCCC-----------cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE-----
Confidence 8776311 2348999999854300000000 000000 0112233456789999999876655
Q ss_pred CCCcccccccCCe-EEEEecCCCCCCCceEEe-e-cccccCCeeeccCCceEEEEEecccCceEEEEEc
Q 002209 422 GGDAKVEVTPRDI-IYTQQAEPVQGEGPEILH-K-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 422 ~~~~~~~~~~~~~-l~~~d~~~~~g~~~~~l~-~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 487 (953)
+..+. +.+||+ .++.....+. . +...+..++|||||+.|+..+.++. .++|.+.
T Consensus 214 --------s~d~~~v~iwd~--~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~--v~iw~~~ 270 (355)
T 3vu4_A 214 --------SQDGTIIRVFKT--EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT--LHVFEIF 270 (355)
T ss_dssp --------ETTCSEEEEEET--TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE--EEEEESS
T ss_pred --------eCCCCEEEEEEC--CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE--EEEEEcc
Confidence 44555 899996 3333334444 2 5667788999999999988875542 2555543
No 330
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.37 E-value=5.6e-11 Score=133.61 Aligned_cols=287 Identities=10% Similarity=0.010 Sum_probs=166.3
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCC-ce----eecccCCCccccccccceEEec-CCeEEEEEecC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-KA----RPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPL 264 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g-~~----~~lt~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~~ 264 (953)
.....++|+...+++. ..+...|.+++++.. +. ..+..+ ...+..++|+| |++.|+...
T Consensus 37 ~~~~~~~~~~~~~~~~--------~~~~g~i~v~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~p~~~~~l~s~s-- 101 (402)
T 2aq5_A 37 SGFCAVNPKFMALICE--------ASGGGAFLVLPLGKTGRVDKNVPLVCGH-----TAPVLDIAWCPHNDNVIASGS-- 101 (402)
T ss_dssp SCSEEECSSEEEEEBC--------CSSSCCEEEEETTCCEECCTTCCCBCCC-----SSCEEEEEECTTCTTEEEEEE--
T ss_pred CCcEEECCCeEEEEEE--------EcCCCEEEEEECccCCCCCCCCceEecC-----CCCEEEEEeCCCCCCEEEEEe--
Confidence 4457788766555442 234567888887543 21 112111 22377999999 888888661
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc--------eeEeCCC-Ccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--------VKEIGPP-AVY 334 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~--------~~~l~~~-~~~ 334 (953)
..+.|.++++ ++. ...+... ..+
T Consensus 102 -----------------------------------------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v 134 (402)
T 2aq5_A 102 -----------------------------------------------EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRV 134 (402)
T ss_dssp -----------------------------------------------TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCE
T ss_pred -----------------------------------------------CCCeEEEEEccCCCCccccCCceEEecCCCCeE
Confidence 1245666676 442 3344434 778
Q ss_pred cccccCCCCc-EEEEEEecCCccccccCCCCCcceEEEeccCceEE-Ee--ccCCCcccCCccccccccCccceeeccCC
Q 002209 335 TSLDPSPDEK-YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-EL--CDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (953)
Q Consensus 335 ~~~~~SpDG~-~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l--~~~~~~~~~p~~~~~~~~~~~~~~wspDg 410 (953)
..++|+|||+ .|+..+.+ +.|.+||+..++.. .+ ..+ ...+..++|+|||
T Consensus 135 ~~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~ 188 (402)
T 2aq5_A 135 GIVAWHPTAQNVLLSAGCD-------------NVILVWDVGTGAAVLTLGPDVH-------------PDTIYSVDWSRDG 188 (402)
T ss_dssp EEEEECSSBTTEEEEEETT-------------SCEEEEETTTTEEEEEECTTTC-------------CSCEEEEEECTTS
T ss_pred EEEEECcCCCCEEEEEcCC-------------CEEEEEECCCCCccEEEecCCC-------------CCceEEEEECCCC
Confidence 8999999995 55555433 38999999865543 33 221 1345679999999
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEE-eecccc-cCCeeeccCCceEEEEEecccCceEEEEEc
Q 002209 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL-HKLDLR-YGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l-~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 487 (953)
+.++.. +..+.|.+||+ ..++. ..+ ..+... +..+.|+|||+.|+...... ....|.++|
T Consensus 189 ~~l~~~-------------~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~-~d~~i~iwd 251 (402)
T 2aq5_A 189 ALICTS-------------CRDKRVRVIEP---RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM-SERQVALWD 251 (402)
T ss_dssp SCEEEE-------------ETTSEEEEEET---TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT-CCEEEEEEE
T ss_pred CEEEEE-------------ecCCcEEEEeC---CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC-CCceEEEEc
Confidence 987766 44668999996 33332 223 223332 56789999999877763211 123677778
Q ss_pred CCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCc--eE
Q 002209 488 PGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS--KE 565 (953)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~--~~ 565 (953)
+.++..............+.. +.|+|||++|+..... ...|++||+.+++ ..
T Consensus 252 ~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~g~~--------------------dg~i~i~d~~~~~~~~~ 305 (402)
T 2aq5_A 252 TKHLEEPLSLQELDTSSGVLL------PFFDPDTNIVYLCGKG--------------------DSSIRYFEITSEAPFLH 305 (402)
T ss_dssp TTBCSSCSEEEECCCCSSCEE------EEEETTTTEEEEEETT--------------------CSCEEEEEECSSTTCEE
T ss_pred CccccCCceEEeccCCCceeE------EEEcCCCCEEEEEEcC--------------------CCeEEEEEecCCCcceE
Confidence 776522122222111122222 7899999988766521 1249999998877 44
Q ss_pred EEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEE
Q 002209 566 RIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (953)
Q Consensus 566 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~L 624 (953)
.+...... ..-....|+|++..++. .. ..+.++++.+++.+.+
T Consensus 306 ~l~~~~~~----------~~v~~~~~sp~~~~~~s----~~--~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 306 YLSMFSSK----------ESQRGMGYMPKRGLEVN----KC--EIARFYKLHERKCEPI 348 (402)
T ss_dssp EEEEECCS----------SCCSEEEECCGGGSCGG----GT--EEEEEEEEETTEEEEE
T ss_pred eecccccC----------CcccceEEeccccccee----cc--eeEEEEEcCCCcEEEE
Confidence 44332211 00122467777775441 11 2455666656655444
No 331
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.5e-10 Score=124.56 Aligned_cols=273 Identities=13% Similarity=0.062 Sum_probs=167.7
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+....| |||+.|+... ....|.++++++++........... +..++|+|||+.|+...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~---------~dg~v~vw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~------ 78 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVS---------RDGTVRLWSKDDQWLGTVVYTGQGF----LNSVCYDSEKELLLFGG------ 78 (313)
T ss_dssp SCEEEEEE-EETTEEEEEE---------TTSEEEEEEESSSEEEEEEEECSSC----EEEEEEETTTTEEEEEE------
T ss_pred CCcEEEEe-cCCCEEEEEE---------cCCcEEEEECCCCEEEEEeecCCcc----EEEEEECCCCCEEEEec------
Confidence 46888899 9999988754 2567888888887655444333322 77899999999998762
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC---c-eeEeCCC-CcccccccCCC
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---T-VKEIGPP-AVYTSLDPSPD 342 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g---~-~~~l~~~-~~~~~~~~SpD 342 (953)
..+.+.++++ +. + ...+... ..+..+.| +
T Consensus 79 -------------------------------------------~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 79 -------------------------------------------KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp -------------------------------------------TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--E
T ss_pred -------------------------------------------CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--c
Confidence 1234455555 32 1 3333333 56667777 7
Q ss_pred CcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc-CCCCceEEEEecc
Q 002209 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYWAETQD 421 (953)
Q Consensus 343 G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp-Dg~~i~~~~~~~~ 421 (953)
++.|+..+.+ +.|.+|| .+.....+..+. ..+..+.|+| +++.++..
T Consensus 114 ~~~l~~~~~d-------------~~i~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~l~~~----- 161 (313)
T 3odt_A 114 DGVVISGSWD-------------KTAKVWK-EGSLVYNLQAHN-------------ASVWDAKVVSFSENKFLTA----- 161 (313)
T ss_dssp TTEEEEEETT-------------SEEEEEE-TTEEEEEEECCS-------------SCEEEEEEEETTTTEEEEE-----
T ss_pred CCEEEEEeCC-------------CCEEEEc-CCcEEEecccCC-------------CceeEEEEccCCCCEEEEE-----
Confidence 8888877644 3899999 433334443322 2335678888 77766554
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceEEee-cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeec
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 500 (953)
+..+.+.+||. +.....+.. ....+..+.|+|+++ ++....++ .+.++|+.++ +......
T Consensus 162 --------~~d~~i~i~d~----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg----~i~i~d~~~~--~~~~~~~ 222 (313)
T 3odt_A 162 --------SADKTIKLWQN----DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG----LIKLVDMHTG--DVLRTYE 222 (313)
T ss_dssp --------ETTSCEEEEET----TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS----EEEEEETTTC--CEEEEEE
T ss_pred --------ECCCCEEEEec----CceEEEEeccCcccEEEEEEcCCCe-EEEccCCC----eEEEEECCch--hhhhhhh
Confidence 34567888883 222333333 555677899999999 55554332 5777777764 3333333
Q ss_pred CCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeE
Q 002209 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (953)
Q Consensus 501 ~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~ 580 (953)
.....+.. +.|+|||+ ++.... ...+++||+.+++.......... .+.
T Consensus 223 ~~~~~i~~------~~~~~~~~-l~~~~~---------------------dg~v~iwd~~~~~~~~~~~~~~~----~i~ 270 (313)
T 3odt_A 223 GHESFVYC------IKLLPNGD-IVSCGE---------------------DRTVRIWSKENGSLKQVITLPAI----SIW 270 (313)
T ss_dssp CCSSCEEE------EEECTTSC-EEEEET---------------------TSEEEEECTTTCCEEEEEECSSS----CEE
T ss_pred cCCceEEE------EEEecCCC-EEEEec---------------------CCEEEEEECCCCceeEEEeccCc----eEE
Confidence 33333333 78999994 544432 12499999998887665544322 111
Q ss_pred eeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002209 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (953)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~ 621 (953)
...|+++++ ++. ... -..++++++.+++.
T Consensus 271 -------~~~~~~~~~-~~~-~~~---dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 271 -------SVDCMSNGD-IIV-GSS---DNLVRIFSQEKSRW 299 (313)
T ss_dssp -------EEEECTTSC-EEE-EET---TSCEEEEESCGGGC
T ss_pred -------EEEEccCCC-EEE-EeC---CCcEEEEeCCCCce
Confidence 246889988 333 322 24588888877654
No 332
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.37 E-value=4.5e-13 Score=142.58 Aligned_cols=192 Identities=13% Similarity=-0.025 Sum_probs=111.6
Q ss_pred cEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh--hhHHHHHHHHHHHHH
Q 002209 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAVE 748 (953)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~~~~ 748 (953)
|.||++||..... ..| ......|++ ||.|+. ++..|+|.+.... ......++|+.+.++
T Consensus 52 ~~lvllHG~~~~~-----------~~~----~~l~~~L~~-~~~v~~---~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~ 112 (280)
T 3qmv_A 52 LRLVCFPYAGGTV-----------SAF----RGWQERLGD-EVAVVP---VQLPGRGLRLRERPYDTMEPLAEAVADALE 112 (280)
T ss_dssp EEEEEECCTTCCG-----------GGG----TTHHHHHCT-TEEEEE---CCCTTSGGGTTSCCCCSHHHHHHHHHHHHH
T ss_pred ceEEEECCCCCCh-----------HHH----HHHHHhcCC-CceEEE---EeCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 8899999963111 112 123445555 999999 5557888764332 234566666666655
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCccc----EEEEcccCCCCCCCCcCccccc-----------------
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC----CGIARSGAYNRTLTPFGFQNED----------------- 807 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~----a~v~~~~~~d~~~~~~~~~~~~----------------- 807 (953)
.+. ..+++.|+||||||.+|+.++.++|+++. .+++.+................
T Consensus 113 ~~~-----~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (280)
T 3qmv_A 113 EHR-----LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDA 187 (280)
T ss_dssp HTT-----CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC--
T ss_pred HhC-----CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChh
Confidence 431 23689999999999999999999887665 5555443211000000000000
Q ss_pred ------------chhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCc
Q 002209 808 ------------RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESH 875 (953)
Q Consensus 808 ------------~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 875 (953)
............+.+ ..+..+++|+|+++|++|..++ .....++.+.+. ..++++++++ ||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~g-gH 260 (280)
T 3qmv_A 188 DTLGAAYFDRRLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIAT--PEMVEAWRPYTT---GSFLRRHLPG-NH 260 (280)
T ss_dssp -------CCTTHHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSC--HHHHHTTGGGBS---SCEEEEEEEE-ET
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcC--hHHHHHHHHhcC---CceEEEEecC-CC
Confidence 000000111111111 2246788999999999999998 777766655442 3367888886 99
Q ss_pred cCCC-cccHHHHHHHHHHH
Q 002209 876 GYAA-RESIMHVLWETDRW 893 (953)
Q Consensus 876 ~~~~-~~~~~~~~~~i~~f 893 (953)
.... .++...+.+.+.+|
T Consensus 261 ~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 261 FFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp TGGGSSHHHHHHHHHHHTT
T ss_pred eEEcCchhHHHHHHHHHhh
Confidence 7643 24444555555544
No 333
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.36 E-value=8e-11 Score=129.93 Aligned_cols=265 Identities=11% Similarity=0.051 Sum_probs=161.5
Q ss_pred CCCCceecCC---CCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCce-eeeecC
Q 002209 110 PLPALSFSPQ---RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGF 185 (953)
Q Consensus 110 ~~~~~~~SPD---G~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~-~~l~~~ 185 (953)
.+..++|||| |++|+....+ +.|.||++...+ ... ..+..+
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~d---------------------------------g~i~iw~~~~~~--~~~~~~~~~h 85 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWA---------------------------------NDVRCWEVQDSG--QTIPKAQQMH 85 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETT---------------------------------SEEEEEEECTTS--CEEEEEEEEC
T ss_pred ceEEEEEcCCCCCceEEEEECCC---------------------------------CcEEEEEcCCCC--ceeEEEeccc
Confidence 5778999999 6888888765 367999995423 222 334332
Q ss_pred CCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEE--ecCCeEEEEEec
Q 002209 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW--VNNSTLLVCTIP 263 (953)
Q Consensus 186 ~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w--spDg~~l~~~~~ 263 (953)
...+....|+|||+.|+... ....|.++|+++++...+..+... +..+.| +||++.|+...
T Consensus 86 --~~~v~~~~~~~~~~~l~s~~---------~dg~v~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~l~~~~- 148 (368)
T 3mmy_A 86 --TGPVLDVCWSDDGSKVFTAS---------CDKTAKMWDLSSNQAIQIAQHDAP-----VKTIHWIKAPNYSCVMTGS- 148 (368)
T ss_dssp --SSCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECSSC-----EEEEEEEECSSCEEEEEEE-
T ss_pred --cCCEEEEEECcCCCEEEEEc---------CCCcEEEEEcCCCCceeeccccCc-----eEEEEEEeCCCCCEEEEcc-
Confidence 24689999999999999755 256889999999887776554432 778999 89999888661
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCCCcccccccCC
Q 002209 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPSP 341 (953)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~~~~~~~~~Sp 341 (953)
..+.|.++|+ +++. ..+........+.++
T Consensus 149 ------------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~- 179 (368)
T 3mmy_A 149 ------------------------------------------------WDKTLKFWDTRSSNPMMVLQLPERCYCADVI- 179 (368)
T ss_dssp ------------------------------------------------TTSEEEEECSSCSSCSEEEECSSCEEEEEEE-
T ss_pred ------------------------------------------------CCCcEEEEECCCCcEEEEEecCCCceEEEec-
Confidence 2246777887 6643 333322333344444
Q ss_pred CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE--EeccCCCcccCCccccccccCccceeeccCCCC----ceE
Q 002209 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR--ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS----TLY 415 (953)
Q Consensus 342 DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~--~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~----i~~ 415 (953)
+..++....+. .+.+|++...... .+.... . .....+.+.+++.. ++.
T Consensus 180 -~~~~~~~~~~~-------------~i~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 180 -YPMAVVATAER-------------GLIVYQLENQPSEFRRIESPL-K-----------HQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp -TTEEEEEEGGG-------------CEEEEECSSSCEEEEECCCSC-S-----------SCEEEEEEEECTTSCEEEEEE
T ss_pred -CCeeEEEeCCC-------------cEEEEEeccccchhhhccccc-c-----------CCCceEEEcccCCCCCCeEEE
Confidence 34555555333 7889999754322 221110 0 11123444444433 333
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCC----ceEEeeccc------------ccCCeeeccCCceEEEEEecccC
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDL------------RYGGISWCDDSLALVYESWYKTR 479 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~----~~~l~~~~~------------~~~~~~~SpDg~~l~~~~~~~~~ 479 (953)
. +..+.+.+|++ .... ...+..+.. .+..++|+|||+.|+....++
T Consensus 234 ~-------------~~dg~i~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-- 295 (368)
T 3mmy_A 234 G-------------SIEGRVAIHYI---NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-- 295 (368)
T ss_dssp E-------------ETTSEEEEEES---SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS--
T ss_pred e-------------cCCCcEEEEec---CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC--
Confidence 2 34557788886 3221 122332222 477899999999988876544
Q ss_pred ceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 480 RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 480 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
.|.++|+.++ +...........+.. +.|+|||++|+....
T Consensus 296 --~i~iwd~~~~--~~~~~~~~~~~~v~~------~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 296 --RFSFWDKDAR--TKLKTSEQLDQPISA------CCFNHNGNIFAYASS 335 (368)
T ss_dssp --CEEEEETTTT--EEEEECCCCSSCEEE------EEECTTSSCEEEEEC
T ss_pred --eEEEEECCCC--cEEEEecCCCCCceE------EEECCCCCeEEEEec
Confidence 4566666664 333333333333333 889999999998874
No 334
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.36 E-value=4.5e-12 Score=137.57 Aligned_cols=209 Identities=11% Similarity=-0.011 Sum_probs=123.5
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|..++....- .++.|.||++||.+.... .|. .....|+ ..|.|++ .|.+|+
T Consensus 28 ~~g~~l~y~~~G--------~g~~~~vvllHG~~~~~~-----------~w~----~~~~~L~-~~~~via---~Dl~Gh 80 (318)
T 2psd_A 28 VLDSFINYYDSE--------KHAENAVIFLHGNATSSY-----------LWR----HVVPHIE-PVARCII---PDLIGM 80 (318)
T ss_dssp ETTEEEEEEECC--------SCTTSEEEEECCTTCCGG-----------GGT----TTGGGTT-TTSEEEE---ECCTTS
T ss_pred eCCeEEEEEEcC--------CCCCCeEEEECCCCCcHH-----------HHH----HHHHHhh-hcCeEEE---EeCCCC
Confidence 477777655431 122468999999642211 121 1122333 4579999 555788
Q ss_pred CChhhhh---hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCC----C
Q 002209 727 GDEEAND---RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT----L 798 (953)
Q Consensus 727 G~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~----~ 798 (953)
|.+.... .......+|+.++++.+ +. +++.|+||||||.+++.+|.++|++++++|+++++.... .
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 154 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFELL------NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDE 154 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTTS------CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTT
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHhc------CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhh
Confidence 8875431 12455555655554432 23 689999999999999999999999999999976432110 0
Q ss_pred CCcC------cccc--------c-------------ch-hhhhHHHHH-----------------hcCcc----------
Q 002209 799 TPFG------FQNE--------D-------------RT-LWEATSTYV-----------------EMSPF---------- 823 (953)
Q Consensus 799 ~~~~------~~~~--------~-------------~~-~~~~~~~~~-----------------~~sp~---------- 823 (953)
.+.. +... . .. ..+..+.+. ...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
T 2psd_A 155 WPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQ 234 (318)
T ss_dssp SCSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHH
T ss_pred hhhHHHHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHH
Confidence 0000 0000 0 00 000000000 00000
Q ss_pred ------cccCCC-CCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 824 ------MSANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 824 ------~~~~~i-~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
..+.++ ++|+|+++|++| .++ + .+.++.+.+. ..+++++ ++||.. ..+..+.+.+.+.+||.+
T Consensus 235 ~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~--~-~~~~~~~~~~----~~~~~~i-~~gH~~-~~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 235 IVRNYNAYLRASDDLPKLFIESDPG-FFS--N-AIVEGAKKFP----NTEFVKV-KGLHFL-QEDAPDEMGKYIKSFVER 304 (318)
T ss_dssp HHHHHHHHHHTCTTSCEEEEEEEEC-SSH--H-HHHHHHTTSS----SEEEEEE-EESSSG-GGTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCeEEEEeccc-cCc--H-HHHHHHHhCC----CcEEEEe-cCCCCC-HhhCHHHHHHHHHHHHHH
Confidence 123457 999999999999 876 5 5555544432 3577778 679976 466788899999999987
Q ss_pred hc
Q 002209 897 YC 898 (953)
Q Consensus 897 ~l 898 (953)
..
T Consensus 305 ~~ 306 (318)
T 2psd_A 305 VL 306 (318)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 335
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.35 E-value=4.1e-13 Score=153.26 Aligned_cols=210 Identities=19% Similarity=0.115 Sum_probs=133.9
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcC-cEEEEcCCC-CCCCCCCh
Q 002209 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG-FAILGGPTT-PIIGEGDE 729 (953)
Q Consensus 652 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G-~~V~~~~~~-~~~G~G~~ 729 (953)
+...+|.|... . +++|+||++|||++..+... ... .....|+++| ++|+.++|+ +..|++..
T Consensus 83 L~l~v~~P~~~--~--~~~PviV~iHGGg~~~g~~~--------~~~----~~~~~la~~g~~vvv~~nYRlg~~Gf~~~ 146 (489)
T 1qe3_A 83 LYVNVFAPDTP--S--QNLPVMVWIHGGAFYLGAGS--------EPL----YDGSKLAAQGEVIVVTLNYRLGPFGFLHL 146 (489)
T ss_dssp CEEEEEEECSS--C--CSEEEEEEECCSTTTSCCTT--------SGG----GCCHHHHHHHTCEEEEECCCCHHHHSCCC
T ss_pred CEEEEEeCCCC--C--CCCCEEEEECCCccccCCCC--------Ccc----cCHHHHHhcCCEEEEecCccCcccccCcc
Confidence 56678888751 1 23899999999875433211 110 1134567665 999998887 33344332
Q ss_pred hh--hhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--CCcccEEEEcccCCCCCCCC--
Q 002209 730 EA--NDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTP-- 800 (953)
Q Consensus 730 ~~--~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~d~~~~~-- 800 (953)
.. ........+.|+.++++|+.++ ..+|+++|.|+|+|+||++++.++... +.+|+++|+.+|..++....
T Consensus 147 ~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~ 226 (489)
T 1qe3_A 147 SSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQA 226 (489)
T ss_dssp TTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHH
T ss_pred ccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHH
Confidence 11 1112234578999999999875 236999999999999999999887753 46899999999976321100
Q ss_pred ----------cCccccc-chhhh--hHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEE
Q 002209 801 ----------FGFQNED-RTLWE--ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRL 867 (953)
Q Consensus 801 ----------~~~~~~~-~~~~~--~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~ 867 (953)
.++.... ..+.. ..+.+...+++........|.+++++..|..+. +++..+++++.+..++++.+
T Consensus 227 ~~~~~~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~--~~~~~~~~~~~~~~~vp~~~ 304 (489)
T 1qe3_A 227 ASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTL--PEEPEKSIAEGAASGIPLLI 304 (489)
T ss_dssp HHHHHHHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTB--CSCHHHHHHTTTTTTCCEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeec--CcCHHHHHhcCCCCCCCEEE
Confidence 0000000 00000 011111112221111234567889999999987 88899999888888999999
Q ss_pred EEeCCCCccCCC
Q 002209 868 VILPFESHGYAA 879 (953)
Q Consensus 868 ~~~~~~~H~~~~ 879 (953)
-..++++|.+..
T Consensus 305 g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 305 GTTRDEGYLFFT 316 (489)
T ss_dssp EEETTGGGGTCC
T ss_pred eeecchhHhhcc
Confidence 999999998753
No 336
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.34 E-value=5.6e-10 Score=127.99 Aligned_cols=256 Identities=12% Similarity=0.091 Sum_probs=152.8
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccc
Q 002209 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (953)
Q Consensus 163 ~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 242 (953)
+.|.+||+.+ + .....+.+ +...+....|+||+ .|+... .+..|.++|+++++...........
T Consensus 142 g~i~vwd~~~-~--~~~~~~~~--h~~~V~~l~~~~~~-~l~s~s---------~dg~i~vwd~~~~~~~~~~~~h~~~- 205 (464)
T 3v7d_B 142 KMIRVYDSIN-K--KFLLQLSG--HDGGVWALKYAHGG-ILVSGS---------TDRTVRVWDIKKGCCTHVFEGHNST- 205 (464)
T ss_dssp SCEEEEETTT-T--EEEEEECC--CSSCEEEEEECSTT-EEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC-
T ss_pred CcEEEEECCC-C--cEEEEEeC--CCcCEEEEEEcCCC-EEEEEe---------CCCCEEEEECCCCcEEEEECCCCCc-
Confidence 4689999853 2 12233333 23478999999998 555533 3567888899888765544333222
Q ss_pred cccccceEEe--cCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEE
Q 002209 243 NAIFDNFVWV--NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (953)
Q Consensus 243 ~~~~~~~~ws--pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 320 (953)
+..+.|+ ++++.|+....+. .|.+++
T Consensus 206 ---v~~l~~~~~~~~~~l~s~s~d~-------------------------------------------------~i~vwd 233 (464)
T 3v7d_B 206 ---VRCLDIVEYKNIKYIVTGSRDN-------------------------------------------------TLHVWK 233 (464)
T ss_dssp ---EEEEEEEESSSCEEEEEEETTS-------------------------------------------------CEEEEE
T ss_pred ---cEEEEEecCCCCCEEEEEcCCC-------------------------------------------------cEEEee
Confidence 6677787 6778888663221 122222
Q ss_pred c-CCc------------------------eeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc
Q 002209 321 L-DGT------------------------VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (953)
Q Consensus 321 ~-~g~------------------------~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 374 (953)
+ ++. ...+... ..+ .+++++|+.|+..+.+. .|.+||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d~-------------~i~vwd~~ 298 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYDN-------------TLIVWDVA 298 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE--EEEEEETTEEEEEETTS-------------CEEEEETT
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE--EEEcCCCCEEEEEeCCC-------------eEEEEECC
Confidence 2 111 1111111 222 34588999998887443 89999998
Q ss_pred CceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee
Q 002209 375 GIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK 453 (953)
Q Consensus 375 g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~ 453 (953)
.+... .+..+ ...+..+.|+|||+.++.. +..+.|.+||+ .++.....+..
T Consensus 299 ~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~sg-------------~~dg~i~vwd~--~~~~~~~~~~~ 350 (464)
T 3v7d_B 299 QMKCLYILSGH-------------TDRIYSTIYDHERKRCISA-------------SMDTTIRIWDL--ENGELMYTLQG 350 (464)
T ss_dssp TTEEEEEECCC-------------SSCEEEEEEETTTTEEEEE-------------ETTSCEEEEET--TTTEEEEEECC
T ss_pred CCcEEEEecCC-------------CCCEEEEEEcCCCCEEEEE-------------eCCCcEEEEEC--CCCcEEEEEeC
Confidence 65433 33322 1345679999999976655 44567999996 23322334445
Q ss_pred cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccC
Q 002209 454 LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKEND 533 (953)
Q Consensus 454 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~ 533 (953)
+...+..+.|+ ++.|+..+.++ .+.++|+.++ ......... .. ...+.|+++|+.|+... +
T Consensus 351 h~~~v~~~~~~--~~~l~s~s~dg----~v~vwd~~~~--~~~~~~~~~-~~------~~~~~~~~~~~~l~~~~-d--- 411 (464)
T 3v7d_B 351 HTALVGLLRLS--DKFLVSAAADG----SIRGWDANDY--SRKFSYHHT-NL------SAITTFYVSDNILVSGS-E--- 411 (464)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTS----EEEEEETTTC--CEEEEEECT-TC------CCEEEEEECSSEEEEEE-T---
T ss_pred CCCcEEEEEEc--CCEEEEEeCCC----cEEEEECCCC--ceeeeecCC-CC------ccEEEEEeCCCEEEEec-C---
Confidence 55666677786 56777665443 4666676664 222222111 11 11167999999887765 1
Q ss_pred CCcEEEEecCCCCCCCCCCeEEEEECCCCceEE
Q 002209 534 EGTYILLNGNGATPEGNIPFLDLFDINTGSKER 566 (953)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~ 566 (953)
..+++||+.+++...
T Consensus 412 ------------------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 412 ------------------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp ------------------TEEEEEETTTCCEEE
T ss_pred ------------------CeEEEEECCCCcEEe
Confidence 149999999988765
No 337
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.34 E-value=7.5e-11 Score=130.12 Aligned_cols=287 Identities=12% Similarity=0.086 Sum_probs=165.3
Q ss_pred CcccceEeccC---CCeEEEEEeeccccCCCCcceEEEEECCCCcee-ecccCCCccccccccceEEecC----CeEEEE
Q 002209 189 AKLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR-PLFQSPDIYLNAIFDNFVWVNN----STLLVC 260 (953)
Q Consensus 189 ~~~~~~~wSPD---G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~~~~wspD----g~~l~~ 260 (953)
..+...+|+|+ ++.++++... ...|.++++.+++.. .+...........+..++|+|+ |+.|+.
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~--------~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVG--------SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEE--------TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCCCceEEEECC--------CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 46888999985 6655555431 237888888765543 3322111111122678999999 677776
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-Cccccc
Q 002209 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSL 337 (953)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~ 337 (953)
.. ..+.|.++++ +++. ..+... ..+..+
T Consensus 91 ~~-------------------------------------------------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 91 AG-------------------------------------------------SRGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EE-------------------------------------------------TTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred ec-------------------------------------------------CCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 51 2246778888 6653 334433 778899
Q ss_pred ccCC-CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEE-eccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 338 DPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 338 ~~Sp-DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
+|+| |++.|+..+.+ +.|.+||+..++... +.... .....+..++|+|||+.++.
T Consensus 122 ~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~ 178 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKD-------------HALRLWNIQTDTLVAIFGGVE----------GHRDEVLSADYDLLGEKIMS 178 (366)
T ss_dssp EECSSCTTEEEEEETT-------------SCEEEEETTTTEEEEEECSTT----------SCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCCCEEEEEeCC-------------CeEEEEEeecCeEEEEecccc----------cccCceeEEEECCCCCEEEE
Confidence 9999 89988887744 389999998655433 32111 11234578999999987665
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCce-EE----------------------------eecccccCCeeeccC
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-IL----------------------------HKLDLRYGGISWCDD 466 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~-~l----------------------------~~~~~~~~~~~~SpD 466 (953)
. +..+.+.+|++ ..++.. .+ ..+...+..+.|+
T Consensus 179 ~-------------~~dg~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 179 C-------------GMDHSLKLWRI---NSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp E-------------ETTSCEEEEES---CSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred e-------------cCCCCEEEEEC---CCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 5 34557888886 222111 01 1144556678888
Q ss_pred CceEEEEEecccCceEEEEEcCCCCCC------------CcEEeecCCCccccCCCCCCCeEeccC--CCEEEEEeeecc
Q 002209 467 SLALVYESWYKTRRTRTWVISPGSKDV------------APRILFDRSSEDVYSDPGSPMMRRTST--GTYVIAKIKKEN 532 (953)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~d~~~~~~------------~~~~~~~~~~~~~~~~~~~p~~~~SpD--G~~l~~~~~~~~ 532 (953)
++.|+....++ .|.++++.++.. ............+.. +.|+|| |++|+....+
T Consensus 241 ~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~~~l~~~~~d-- 308 (366)
T 3k26_A 241 GDLILSKSCEN----AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY------MRFSMDFWQKMLALGNQV-- 308 (366)
T ss_dssp TTEEEEECSSS----EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC------CCCEECTTSSEEEEECTT--
T ss_pred CCEEEEEecCC----EEEEEeCCCccccccccccCCcchheeccccccCCcEEE------EEEcCCCCCcEEEEEecC--
Confidence 66776665433 344444443211 011112222222222 678999 9988877532
Q ss_pred CCCcEEEEecCCCCCCCCCCeEEEEECCCCceEE----EeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCC
Q 002209 533 DEGTYILLNGNGATPEGNIPFLDLFDINTGSKER----IWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTEN 608 (953)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p 608 (953)
..|++||+.+++... ....... -..+. ...|++|++.++.....
T Consensus 309 -------------------g~i~vwd~~~~~~~~~~~~~~~~~~~--~~~v~-------~~~~s~~~~~l~s~~~d---- 356 (366)
T 3k26_A 309 -------------------GKLYVWDLEVEDPHKAKCTTLTHHKC--GAAIR-------QTSFSRDSSILIAVCDD---- 356 (366)
T ss_dssp -------------------SCEEEEECCSSSGGGCEEEEECCTTC--CSCEE-------EEEECTTSSEEEEEETT----
T ss_pred -------------------CcEEEEECCCCCCccccceEEccccc--CCceE-------EEEeCCCCCeEEEEeCC----
Confidence 249999998875321 1111100 00111 24689999877754432
Q ss_pred ceEEEEECC
Q 002209 609 TQYYIQSWP 617 (953)
Q Consensus 609 ~~l~~~~~~ 617 (953)
..+++|++.
T Consensus 357 g~i~iwd~~ 365 (366)
T 3k26_A 357 ASIWRWDRL 365 (366)
T ss_dssp SEEEEEEC-
T ss_pred CEEEEEEec
Confidence 357887753
No 338
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.34 E-value=9.2e-12 Score=131.07 Aligned_cols=194 Identities=13% Similarity=0.109 Sum_probs=112.0
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhh-hHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR-FVEQLVACAEAAVE 748 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~-~~~~~~~D~~~~~~ 748 (953)
.|.||++||..... ..| ......|++.||.|++ .|.+|+|.+..... .+...++|+.+.++
T Consensus 16 ~~~vvllHG~~~~~-----------~~w----~~~~~~L~~~~~~vi~---~Dl~GhG~S~~~~~~~~~~~a~~l~~~l~ 77 (264)
T 1r3d_A 16 TPLVVLVHGLLGSG-----------ADW----QPVLSHLARTQCAALT---LDLPGHGTNPERHCDNFAEAVEMIEQTVQ 77 (264)
T ss_dssp BCEEEEECCTTCCG-----------GGG----HHHHHHHTTSSCEEEE---ECCTTCSSCC-------CHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCCH-----------HHH----HHHHHHhcccCceEEE---ecCCCCCCCCCCCccCHHHHHHHHHHHHH
Confidence 47899999953211 111 1234455558999999 55578888754221 12333444433332
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHH---HHHhCCCcccEEEEcccCCCCCCCC-----------cC-------ccc--
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTAN---LLAHAPHLFCCGIARSGAYNRTLTP-----------FG-------FQN-- 805 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~---~a~~~p~~~~a~v~~~~~~d~~~~~-----------~~-------~~~-- 805 (953)
. . .++..++.|+||||||.+++. ++.++|++++++|+.++........ +. ...
T Consensus 78 ~---l-~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 1r3d_A 78 A---H-VTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVL 153 (264)
T ss_dssp T---T-CCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred H---h-CcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHH
Confidence 2 2 232224999999999999999 7788999999999887643211000 00 000
Q ss_pred ---ccchhhh-----h------------H----HHHHhc------CcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHH
Q 002209 806 ---EDRTLWE-----A------------T----STYVEM------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (953)
Q Consensus 806 ---~~~~~~~-----~------------~----~~~~~~------sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~ 855 (953)
.....+. . . ..+... .....+.++++|+|+++|++|..++ .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-------~~~ 226 (264)
T 1r3d_A 154 SDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLA 226 (264)
T ss_dssp HHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHH
T ss_pred HHHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-------HHH
Confidence 0000000 0 0 001100 1112345788999999999996431 222
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 856 NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 856 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
+.+. .++++++++||... .+..+.+.+.+.+|+.++.
T Consensus 227 ~~~~-----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 227 ESSG-----LSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHHC-----SEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHhC-----CcEEEcCCCCCchh-hcCHHHHHHHHHHHHHHhc
Confidence 3321 46889999999863 5667888999999998763
No 339
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.33 E-value=1.3e-10 Score=124.61 Aligned_cols=227 Identities=11% Similarity=0.112 Sum_probs=136.7
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc--e-eecccCCCccccccccceEEecC--CeEEEEEec
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK--A-RPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIP 263 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~--~-~~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~ 263 (953)
..+...+|||||++||.... +..|.+++++++. . ..+..+.. .+..++|+++ |+.|+...
T Consensus 10 ~~V~~~~~s~~g~~las~s~---------D~~v~iw~~~~~~~~~~~~l~gH~~-----~V~~v~~s~~~~g~~l~s~s- 74 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSS---------DKTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCS- 74 (297)
T ss_dssp SCEEEEEECTTSSEEEEEET---------TSCEEEEEBCSSCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEEE-
T ss_pred CceEEEEECCCCCEEEEEeC---------CCEEEEEecCCCCcEEEEEEccccC-----CeEEEEecCCCcCCEEEEEc-
Confidence 36888999999999988652 4566777776432 2 23333222 2778999864 88887651
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc---eeEeCCC-Ccccccc
Q 002209 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLD 338 (953)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~ 338 (953)
..+.|.++|+ +|+ ...+... ..+..++
T Consensus 75 ------------------------------------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~ 106 (297)
T 2pm7_B 75 ------------------------------------------------YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQ 106 (297)
T ss_dssp ------------------------------------------------TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEE
T ss_pred ------------------------------------------------CCCEEEEEEcCCCceEEEEEeecCCCceeEEE
Confidence 1245666777 653 2233333 6788999
Q ss_pred cCCC--CcEEEEEEecCCccccccCCCCCcceEEEeccCce-E--EEeccCCCcccCCccccccccCccceeeccCC---
Q 002209 339 PSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-V--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDK--- 410 (953)
Q Consensus 339 ~SpD--G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~--~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg--- 410 (953)
|+|| |+.|+..+.+. .|.+||+..+. . ..+. +....+..++|+|++
T Consensus 107 ~~p~~~g~~l~s~s~d~-------------~v~~wd~~~~~~~~~~~~~-------------~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 107 WAPHEYGPMLLVASSDG-------------KVSVVEFKENGTTSPIIID-------------AHAIGVNSASWAPATIEE 160 (297)
T ss_dssp ECCGGGCSEEEEEETTS-------------EEEEEEBCSSSCBCCEEEE-------------CCSSCEEEEEECCCC---
T ss_pred eCcCCCCcEEEEEECCC-------------cEEEEEecCCCceeeeeee-------------cccCccceEeecCCcccc
Confidence 9998 88888777443 89999997532 1 1111 122345678999984
Q ss_pred ----------CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC-c----eEEeecccccCCeeeccCC---ceEEE
Q 002209 411 ----------PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-P----EILHKLDLRYGGISWCDDS---LALVY 472 (953)
Q Consensus 411 ----------~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~-~----~~l~~~~~~~~~~~~SpDg---~~l~~ 472 (953)
+.|+.. +..+.|.+||+ ..++ . ..+..+...+..++|+|++ +.|+.
T Consensus 161 ~~~~~~~~~~~~l~sg-------------s~D~~v~lwd~---~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTG-------------GADNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp ---------CCEEEEE-------------ETTSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred cccCCCCCCcceEEEE-------------cCCCcEEEEEE---cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence 333322 34557888886 3222 1 2344556667889999996 66666
Q ss_pred EEecccCceEEEEEcCCCCCCCcEEee-cCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 473 ESWYKTRRTRTWVISPGSKDVAPRILF-DRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 473 ~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
.+.++. .+||.++...+......+. ......++. ++|+|||++|+...
T Consensus 225 ~s~D~~--v~iWd~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~g~~las~~ 273 (297)
T 2pm7_B 225 VSQDRT--CIIWTQDNEQGPWKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (297)
T ss_dssp EETTSC--EEEEEESSTTSCCEEEESSSSCCSSCEEE------EEECSSSCCEEEEE
T ss_pred EECCCc--EEEEEeCCCCCccceeeeecccCCCcEEE------EEECCCCCEEEEEc
Confidence 655443 4777665432210111221 111222222 78999999998776
No 340
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.33 E-value=5.4e-11 Score=129.94 Aligned_cols=103 Identities=12% Similarity=0.116 Sum_probs=67.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCC-CC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~-~~ 188 (953)
.+..++|||||++||....+ +.|.+|++.... ...+.+..+. ..
T Consensus 13 ~v~~~~~~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~--~~~~~~~~~~~~~ 57 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSD---------------------------------QHIKVFKLDKDT--SNWELSDSWRAHD 57 (351)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEEECSSS--CCEEEEEEEECCS
T ss_pred ceeEEEEcCCCCEEEEeeCC---------------------------------CeEEEEECCCCC--CcceecceeccCC
Confidence 46788999999999988775 367999985422 1112221121 23
Q ss_pred CcccceEecc--CCCeEEEEEeeccccCCCCcceEEEEECCCCc----------eeecccCCCccccccccceEEecC--
Q 002209 189 AKLNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----------ARPLFQSPDIYLNAIFDNFVWVNN-- 254 (953)
Q Consensus 189 ~~~~~~~wSP--DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~----------~~~lt~~~~~~~~~~~~~~~wspD-- 254 (953)
..+....|+| ||+.|+.... ...|.++|+++++ ...+..+.. .+..++|+|+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~---------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 123 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASY---------DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG-----SLYSVKFAPAHL 123 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEET---------TSCEEEEEECTTSCTTSSCSEEEEEEECCCSS-----CEEEEEECCGGG
T ss_pred CcEEEEEEcCCCCCCEEEEEcC---------CCeEEEEecCCCcccccccCcceeeeecccCC-----ceeEEEEcCCCC
Confidence 4789999999 6998887552 4567777777653 122222222 2778999999
Q ss_pred CeEEEEE
Q 002209 255 STLLVCT 261 (953)
Q Consensus 255 g~~l~~~ 261 (953)
++.|+..
T Consensus 124 ~~~l~~~ 130 (351)
T 3f3f_A 124 GLKLACL 130 (351)
T ss_dssp CSEEEEE
T ss_pred CcEEEEe
Confidence 9888876
No 341
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.01 E-value=1.2e-13 Score=148.46 Aligned_cols=197 Identities=11% Similarity=0.012 Sum_probs=117.8
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhh-------hhHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND-------RFVEQLVAC 742 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~-------~~~~~~~~D 742 (953)
.|+||++||..... ..|. .....|+ +||.|+. ++.+|+|.+.... ......++|
T Consensus 25 ~p~vv~lHG~~~~~-----------~~~~----~~~~~l~-~g~~v~~---~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (304)
T 3b12_A 25 GPALLLLHGFPQNL-----------HMWA----RVAPLLA-NEYTVVC---ADLRGYGGSSKPVGAPDHANYSFRAMASD 85 (304)
Confidence 57899999963211 1121 2233455 8999999 5556788775431 123344556
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCC---------------------c
Q 002209 743 AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP---------------------F 801 (953)
Q Consensus 743 ~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~---------------------~ 801 (953)
+.++++.+ +.+++.|+||||||.+++.++.++|++++++|++++........ .
T Consensus 86 l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
T 3b12_A 86 QRELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPY 159 (304)
Confidence 66655554 33589999999999999999999999999999998754311000 0
Q ss_pred ----------Ccccc-c---------chhhhhHHHH-----------------Hhc---C----cccccCCCCCcEEEEE
Q 002209 802 ----------GFQNE-D---------RTLWEATSTY-----------------VEM---S----PFMSANKLKKPILLVH 837 (953)
Q Consensus 802 ----------~~~~~-~---------~~~~~~~~~~-----------------~~~---s----p~~~~~~i~~P~Li~~ 837 (953)
.+... . ....+..+.+ ... . ....+.++++|+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 239 (304)
T 3b12_A 160 PEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFS 239 (304)
Confidence 00000 0 0000000000 000 0 0011567899999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
|++|..++ +......+.+.+. .++++++ ++||... .++.+.+.+.+.+||++..
T Consensus 240 G~~D~~~~-~~~~~~~~~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~ 293 (304)
T 3b12_A 240 GSAGLMHS-LFEMQVVWAPRLA----NMRFASL-PGGHFFV-DRFPDDTARILREFLSDAR 293 (304)
Confidence 99996553 0333333333332 2567778 9999864 5666788888999998764
No 342
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.7e-10 Score=127.89 Aligned_cols=229 Identities=13% Similarity=0.101 Sum_probs=139.7
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCC--CceeecccCCCccccccccceEEecC--CeEEEEEecC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT--GKARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPL 264 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~--g~~~~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~~ 264 (953)
..+...+|+|||++|+... . ...|.++++++ ++.......... .+..++|+++ ++.|+...
T Consensus 12 ~~v~~~~~s~~~~~l~~~~-------~--dg~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~l~s~~-- 76 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCS-------S--DKTIKIFEVEGETHKLIDTLTGHEG----PVWRVDWAHPKFGTILASCS-- 76 (379)
T ss_dssp CCEEEEEECSSSSEEEEEE-------T--TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE--
T ss_pred ccEEEEEEcCCCCEEEEEE-------C--CCcEEEEecCCCcceeeeEecCCCC----cEEEEEeCCCCCCCEEEEec--
Confidence 4688999999999998854 2 34555556553 333222222222 2778999977 88888661
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc---eeEeCCC-Cccccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDP 339 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~ 339 (953)
..+.|.++++ +++ ...+... ..+..++|
T Consensus 77 -----------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 109 (379)
T 3jrp_A 77 -----------------------------------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 109 (379)
T ss_dssp -----------------------------------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred -----------------------------------------------cCCEEEEEEcCCCceeEeeeecCCCcceEEEEe
Confidence 2245667777 663 3334434 77889999
Q ss_pred CCC--CcEEEEEEecCCccccccCCCCCcceEEEeccCceE---EEeccCCCcccCCccccccccCccceeecc------
Q 002209 340 SPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRS------ 408 (953)
Q Consensus 340 SpD--G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp------ 408 (953)
+|+ |+.|+....+. .|.+||+..... ..+..+ ...+..+.|+|
T Consensus 110 ~~~~~~~~l~~~~~d~-------------~i~v~d~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 110 APHEYGPLLLVASSDG-------------KVSVVEFKENGTTSPIIIDAH-------------AIGVNSASWAPATIEED 163 (379)
T ss_dssp CCGGGCSEEEEEETTS-------------EEEEEECCTTSCCCEEEEECC-------------TTCEEEEEECCCC----
T ss_pred CCCCCCCEEEEecCCC-------------cEEEEecCCCCceeeEEecCC-------------CCceEEEEEcCcccccc
Confidence 999 99998887443 899999985421 112111 13456789999
Q ss_pred -------CCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCce----EEeecccccCCeeeccC---CceEEEEE
Q 002209 409 -------DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE----ILHKLDLRYGGISWCDD---SLALVYES 474 (953)
Q Consensus 409 -------Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~----~l~~~~~~~~~~~~SpD---g~~l~~~~ 474 (953)
|++.++.. +..+.|.+||+ ..+.... .+..+...+..++|+|| ++.|+...
T Consensus 164 ~~~~~~~~~~~l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 164 GEHNGTKESRKFVTG-------------GADNLVKIWKY--NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp ------CTTCEEEEE-------------ETTSCEEEEEE--ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ccccCCCCCCEEEEE-------------eCCCeEEEEEe--cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 67766555 34557888886 2222221 23344566778999999 77777765
Q ss_pred ecccCceEEEEEcCCCCCCCcEEeecC--CCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 475 WYKTRRTRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 475 ~~~~~~~~l~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
.++. .++|.++..... ....+... ....+.. +.|+|||++|+....
T Consensus 229 ~dg~--i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~------~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 229 QDRT--CIIWTQDNEQGP-WKKTLLKEEKFPDVLWR------ASWSLSGNVLALSGG 276 (379)
T ss_dssp TTSC--EEEEEESSTTSC-CEEEESSSSCCSSCEEE------EEECSSSCCEEEEES
T ss_pred CCCE--EEEEeCCCCCcc-ceeeeeccccCCCcEEE------EEEcCCCCEEEEecC
Confidence 4432 366665543211 11222211 1112222 789999999988763
No 343
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.32 E-value=5.9e-10 Score=124.95 Aligned_cols=291 Identities=8% Similarity=0.051 Sum_probs=165.5
Q ss_pred CcccceEecc-CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCC---------CccccccccceEEec-CCeE
Q 002209 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSP---------DIYLNAIFDNFVWVN-NSTL 257 (953)
Q Consensus 189 ~~~~~~~wSP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~---------~~~~~~~~~~~~wsp-Dg~~ 257 (953)
..+....|+| ||+.|+.... ...|.++++++++........ .......+..+.|+| +++.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS---------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET---------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred CcEEEEEEecCCCCEEEEEcC---------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 4789999999 9999888552 457888888876544332100 000122377899999 6666
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-Cccc
Q 002209 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYT 335 (953)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~ 335 (953)
|+... ..+.|.++++ +++....... ..+.
T Consensus 115 l~s~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~ 145 (408)
T 4a11_B 115 FTSSS-------------------------------------------------FDKTLKVWDTNTLQTADVFNFEETVY 145 (408)
T ss_dssp EEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred EEEEe-------------------------------------------------CCCeEEEeeCCCCccceeccCCCcee
Confidence 66551 2246777888 6654433323 5566
Q ss_pred ccccCC---CCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCC
Q 002209 336 SLDPSP---DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (953)
Q Consensus 336 ~~~~Sp---DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~ 411 (953)
.+.|+| +++.|+....+ +.|.+||+..+. ...+..+. ..+..++|+||++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~-------------~~v~~~d~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 199 (408)
T 4a11_B 146 SHHMSPVSTKHCLVAVGTRG-------------PKVQLCDLKSGSCSHILQGHR-------------QEILAVSWSPRYD 199 (408)
T ss_dssp EEEECSSCSSCCEEEEEESS-------------SSEEEEESSSSCCCEEECCCC-------------SCEEEEEECSSCT
T ss_pred eeEeecCCCCCcEEEEEcCC-------------CeEEEEeCCCcceeeeecCCC-------------CcEEEEEECCCCC
Confidence 677777 55577777643 389999998543 33333221 3456799999999
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEecCCCCCC-CceEE---------------eecccccCCeeeccCCceEEEEEe
Q 002209 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE-GPEIL---------------HKLDLRYGGISWCDDSLALVYESW 475 (953)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~-~~~~l---------------~~~~~~~~~~~~SpDg~~l~~~~~ 475 (953)
.+++.. +..+.+.+||+ ..+. ....+ ..+...+..+.|+|||+.|+....
T Consensus 200 ~ll~~~------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 200 YILATA------------SADSRVKLWDV--RRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp TEEEEE------------ETTSCEEEEET--TCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEE------------cCCCcEEEEEC--CCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 755441 33457888886 2221 11222 233455667899999999988765
Q ss_pred cccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEe-ccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeE
Q 002209 476 YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (953)
Q Consensus 476 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 554 (953)
++ .+.++++.++. ............ .. ......+ ...+..+++...+ ..+
T Consensus 266 dg----~i~vwd~~~~~-~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~---------------------~~i 316 (408)
T 4a11_B 266 DN----RMRLWNSSNGE-NTLVNYGKVCNN-SK--KGLKFTVSCGCSSEFVFVPYG---------------------STI 316 (408)
T ss_dssp TS----CEEEEETTTCC-BCCCCCCCCCCC-CS--SCCCCEECCSSSSCEEEEEET---------------------TEE
T ss_pred CC----eEEEEECCCCc-cceecccccccc-cc--ccceeEEecCCCceEEEEecC---------------------CEE
Confidence 43 45666666642 111111110000 00 0000112 2223334443321 259
Q ss_pred EEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002209 555 DLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (953)
Q Consensus 555 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~ 621 (953)
++||+.+++.......... .+. ..+|+||++.++..... ..+.+|++.+++.
T Consensus 317 ~v~d~~~~~~~~~~~~~~~----~v~-------~~~~s~~~~~l~s~~~d----g~i~iw~~~~~~~ 368 (408)
T 4a11_B 317 AVYTVYSGEQITMLKGHYK----TVD-------CCVFQSNFQELYSGSRD----CNILAWVPSLYEP 368 (408)
T ss_dssp EEEETTTCCEEEEECCCSS----CEE-------EEEEETTTTEEEEEETT----SCEEEEEECC---
T ss_pred EEEECcCCcceeeeccCCC----eEE-------EEEEcCCCCEEEEECCC----CeEEEEeCCCCCc
Confidence 9999998887665543322 122 24689999877644333 3588888877654
No 344
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.32 E-value=6.8e-13 Score=141.92 Aligned_cols=168 Identities=13% Similarity=0.110 Sum_probs=105.6
Q ss_pred HcCcEEEEcCCCCCCCCCChh-hh--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccE
Q 002209 710 ARGFAILGGPTTPIIGEGDEE-AN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~-~~--~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (953)
++||.|++ ++.+|+|.+. .. ........+|+.++++.+ ..+++.|+||||||.+++.++.++|+++++
T Consensus 67 ~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 137 (292)
T 3l80_A 67 PDSIGILT---IDAPNSGYSPVSNQANVGLRDWVNAILMIFEHF------KFQSYLLCVHSIGGFAALQIMNQSSKACLG 137 (292)
T ss_dssp CTTSEEEE---ECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHS------CCSEEEEEEETTHHHHHHHHHHHCSSEEEE
T ss_pred hhcCeEEE---EcCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEEchhHHHHHHHHHhCchheee
Confidence 37999999 4556777775 22 123556666666655543 235899999999999999999999999999
Q ss_pred EEEcccCCCCCC--CCcC------------ccc------c---c----------chhhh----hHHHHHhcCc-------
Q 002209 787 GIARSGAYNRTL--TPFG------------FQN------E---D----------RTLWE----ATSTYVEMSP------- 822 (953)
Q Consensus 787 ~v~~~~~~d~~~--~~~~------------~~~------~---~----------~~~~~----~~~~~~~~sp------- 822 (953)
+|+++|...... .... ... . . ...+. ....+....+
T Consensus 138 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (292)
T 3l80_A 138 FIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIR 217 (292)
T ss_dssp EEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSS
T ss_pred EEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchh
Confidence 999984321000 0000 000 0 0 00000 0011112222
Q ss_pred --------ccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 823 --------FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 823 --------~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
...+.+ ++|+|+++|++|..++ +. + ++.+.+. ..+ +++++++|... .++.+.+.+.+.+||
T Consensus 218 ~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~--~~-~-~~~~~~~----~~~-~~~~~~gH~~~-~e~p~~~~~~i~~fl 286 (292)
T 3l80_A 218 LALGEEDFKTGISE-KIPSIVFSESFREKEY--LE-S-EYLNKHT----QTK-LILCGQHHYLH-WSETNSILEKVEQLL 286 (292)
T ss_dssp CCCCGGGGCCCCCT-TSCEEEEECGGGHHHH--HT-S-TTCCCCT----TCE-EEECCSSSCHH-HHCHHHHHHHHHHHH
T ss_pred hhhcchhhhhccCC-CCCEEEEEccCccccc--hH-H-HHhccCC----Cce-eeeCCCCCcch-hhCHHHHHHHHHHHH
Confidence 123344 7899999999999876 55 4 4443322 235 88999999763 466778889999999
Q ss_pred HHh
Q 002209 895 QKY 897 (953)
Q Consensus 895 ~~~ 897 (953)
+++
T Consensus 287 ~~~ 289 (292)
T 3l80_A 287 SNH 289 (292)
T ss_dssp HTC
T ss_pred Hhc
Confidence 865
No 345
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.31 E-value=1.1e-09 Score=123.68 Aligned_cols=281 Identities=13% Similarity=0.130 Sum_probs=171.0
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
.+.+-..||+++ .||... +..|++||+.+|+..++..... ....+..++|+|||+.|+...
T Consensus 106 ~y~~~l~wS~~n-~lAvgl----------d~tV~lWd~~tg~~~~~~~~~~--~~~~V~sv~fspdg~~lasgs------ 166 (420)
T 4gga_A 106 YYLNLVDWSSGN-VLAVAL----------DNSVYLWSASSGDILQLLQMEQ--PGEYISSVAWIKEGNYLAVGT------ 166 (420)
T ss_dssp TTCBCEEECTTS-EEEEEE----------TTEEEEEETTTCCEEEEEECCS--TTCCEEEEEECTTSSEEEEEE------
T ss_pred ccceeEEECCCC-EEEEEe----------CCEEEEEECCCCCEEEEEEecC--CCCcEEEEEECCCCCEEEEEE------
Confidence 356778999864 666533 4689999999998876654322 111277999999999998761
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-CcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDG~~ 345 (953)
..+.|.++++ +++.. .+... ..+. ++++|++.
T Consensus 167 -------------------------------------------~Dg~v~iWd~~~~~~~~~~~~h~~~v~--~~s~~~~~ 201 (420)
T 4gga_A 167 -------------------------------------------SSAEVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYI 201 (420)
T ss_dssp -------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEE--EEEEETTE
T ss_pred -------------------------------------------CCCeEEEEEcCCCcEEEEEeCCCCceE--EEeeCCCE
Confidence 2245667788 66543 33333 4443 45667888
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
|+..+.+ ..+.+||..... ...+..+. ..+..+.|+|+|+.++..
T Consensus 202 l~sgs~d-------------~~i~~~d~~~~~~~~~~~~~h~-------------~~~~~~~~~~~g~~l~s~------- 248 (420)
T 4gga_A 202 LSSGSRS-------------GHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRHLASG------- 248 (420)
T ss_dssp EEEEETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE-------
T ss_pred EEEEeCC-------------CceeEeeecccceeeEEecccc-------------cceeeeeecCCCCeeeee-------
Confidence 7776633 378889886432 23333221 234568899999977665
Q ss_pred CcccccccCCeEEEEecCCCCCCC----ceEEeecccccCCeeeccCCceEEEEEec-ccCceEEEEEcCCCCCCCcEEe
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYESWY-KTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g~~----~~~l~~~~~~~~~~~~SpDg~~l~~~~~~-~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
...+.+.+++. ..+.. ..........+..++|+|++..+++.... ..+ .|.++|+.++ +....
T Consensus 249 ------~~D~~v~i~~~--~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~--~I~iwd~~t~--~~~~~ 316 (420)
T 4gga_A 249 ------GNDNLVNVWPS--APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR--HIRIWNVCSG--ACLSA 316 (420)
T ss_dssp ------ETTSCEEEEES--SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC--EEEEEETTTT--EEEEE
T ss_pred ------eccccceEEee--ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC--EEEEEeCCcc--cccee
Confidence 44567888885 22211 22334455667788999998877665432 122 5666677764 22222
Q ss_pred ecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~ 578 (953)
...... +.. +.|+|+++.++...... ...|++||+.+++......+... .
T Consensus 317 ~~~~~~-v~~------~~~~~~~~~lv~~sg~~-------------------d~~I~iwd~~~~~~v~~l~gH~~----~ 366 (420)
T 4gga_A 317 VDAHSQ-VCS------ILWSPHYKELISGHGFA-------------------QNQLVIWKYPTMAKVAELKGHTS----R 366 (420)
T ss_dssp EECSSC-EEE------EEEETTTTEEEEEECTT-------------------TCCEEEEETTTCCEEEEECCCSS----C
T ss_pred eccccc-eee------eeecCCCCeEEEEEecC-------------------CCEEEEEECCCCcEEEEEcCCCC----C
Confidence 222221 222 67999999887764211 12499999988876554443211 1
Q ss_pred eEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002209 579 TVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (953)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g 619 (953)
+.. .+|+|||+.|+- .+.. ..|.+|++...
T Consensus 367 V~~-------l~~spdg~~l~S-~s~D---~tvriWdv~~~ 396 (420)
T 4gga_A 367 VLS-------LTMSPDGATVAS-AAAD---ETLRLWRCFEL 396 (420)
T ss_dssp EEE-------EEECTTSSCEEE-EETT---TEEEEECCSCS
T ss_pred EEE-------EEEcCCCCEEEE-EecC---CeEEEEECCCC
Confidence 222 368999987663 3332 35888886543
No 346
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.30 E-value=2.9e-11 Score=128.17 Aligned_cols=214 Identities=14% Similarity=0.040 Sum_probs=126.8
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCC
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~ 726 (953)
.+|..++.... +.+ .. .|.||++||.+.. ...|. .....| +.+|.|++ .|.+|+
T Consensus 11 ~~g~~l~y~~~-~~G----~~--~p~vvllHG~~~~--------------~~~w~-~~~~~L-~~~~rvia---~DlrGh 64 (276)
T 2wj6_A 11 VFDNKLSYIDN-QRD----TD--GPAILLLPGWCHD--------------HRVYK-YLIQEL-DADFRVIV---PNWRGH 64 (276)
T ss_dssp ETTEEEEEEEC-CCC----CS--SCEEEEECCTTCC--------------GGGGH-HHHHHH-TTTSCEEE---ECCTTC
T ss_pred eCCeEEEEEEe-cCC----CC--CCeEEEECCCCCc--------------HHHHH-HHHHHH-hcCCEEEE---eCCCCC
Confidence 47877765543 111 11 3789999996321 11111 223334 46799999 555788
Q ss_pred CChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCcccEEEEcccCCCCCCCC---
Q 002209 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTLTP--- 800 (953)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~d~~~~~--- 800 (953)
|.|.... .......+|+.+.++.+ +-+++.|+||||||.+++.++.++ |++++++|++++........
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~ 138 (276)
T 2wj6_A 65 GLSPSEVPDFGYQEQVKDALEILDQL------GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK 138 (276)
T ss_dssp SSSCCCCCCCCHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH
Confidence 8875432 23667788888887775 235899999999999999999999 99999999987532100000
Q ss_pred --------cCccc------------ccc-h---------------hhhhH-----HHHHh-cCcccccCCCCCcEEEEEe
Q 002209 801 --------FGFQN------------EDR-T---------------LWEAT-----STYVE-MSPFMSANKLKKPILLVHG 838 (953)
Q Consensus 801 --------~~~~~------------~~~-~---------------~~~~~-----~~~~~-~sp~~~~~~i~~P~Li~~G 838 (953)
..+.. ... . .|... ..+.. .++...+.++++|+|+++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~ 218 (276)
T 2wj6_A 139 SLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHI 218 (276)
T ss_dssp HHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEE
T ss_pred HhhhccCcchHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEE
Confidence 00000 000 0 00000 00000 1122345678899999987
Q ss_pred CCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
..|...+.+.....++.+.+ ...+++++|++||.. ..+..+.+.+.+.+||.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~----p~a~~~~i~~~gH~~-~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 219 FSQPTEPEYEKINSDFAEQH----PWFSYAKLGGPTHFP-AIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp ECCSCSHHHHHHHHHHHHHC----TTEEEEECCCSSSCH-HHHSHHHHHHHHHHHHHHH
T ss_pred ecCccchhHHHHHHHHHhhC----CCeEEEEeCCCCCcc-cccCHHHHHHHHHHHHhhc
Confidence 54433220011223333222 347999999999975 3567788899999999764
No 347
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.27 E-value=1.2e-10 Score=126.19 Aligned_cols=244 Identities=12% Similarity=0.077 Sum_probs=135.2
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCcee---ecccCCCccccccccceEEec--CCeEEEEEec
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVN--NSTLLVCTIP 263 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~~~~wsp--Dg~~l~~~~~ 263 (953)
..+...+|+|||++||.... ...|.++|+.+++.. .+..+.. .+..++|++ +|+.|+...
T Consensus 14 ~~V~~v~~s~~g~~lasgs~---------D~~v~lwd~~~~~~~~~~~l~gH~~-----~V~~v~~~~~~~~~~l~s~s- 78 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSS---------DRSVKIFDVRNGGQILIADLRGHEG-----PVWQVAWAHPMYGNILASCS- 78 (316)
T ss_dssp CCEEEEEECGGGCEEEEEET---------TTEEEEEEEETTEEEEEEEEECCSS-----CEEEEEECCGGGSSCEEEEE-
T ss_pred CeEEEeeEcCCCCEEEEEeC---------CCeEEEEEecCCCcEEEEEEcCCCc-----cEEEEEeCCCCCCCEEEEEE-
Confidence 36888999999999988552 456777777666432 2322222 277899985 478777651
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc---eeEeCCC-Ccccccc
Q 002209 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLD 338 (953)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~ 338 (953)
..+.+.++|+ +++ ...+... ..+..++
T Consensus 79 ------------------------------------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~ 110 (316)
T 3bg1_A 79 ------------------------------------------------YDRKVIIWREENGTWEKSHEHAGHDSSVNSVC 110 (316)
T ss_dssp ------------------------------------------------TTSCEEEECCSSSCCCEEEEECCCSSCCCEEE
T ss_pred ------------------------------------------------CCCEEEEEECCCCcceEEEEccCCCCceEEEE
Confidence 1234556677 553 2233333 6788999
Q ss_pred cCCC--CcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 339 PSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 339 ~SpD--G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
|+|| |+.|+..+.+. .|.+|++.++. ........ .....+..++|+|++..-.+
T Consensus 111 ~~p~~~g~~lasgs~D~-------------~i~lwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 111 WAPHDYGLILACGSSDG-------------AISLLTYTGEGQWEVKKINN----------AHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp ECCTTTCSCEEEECSSS-------------CEEEEEECSSSCEEECCBTT----------SSSSCBCCCEECCCCCC---
T ss_pred ECCCCCCcEEEEEcCCC-------------CEEEEecCCCCCcceeeeec----------cccCCcceEEEccccCCccc
Confidence 9998 78888776443 89999997542 22111111 11234467889998421000
Q ss_pred EEEec----cCCCcccccccCCeEEEEecCCCCCCCceE---EeecccccCCeeeccCC----ceEEEEEecccCceEEE
Q 002209 416 WAETQ----DGGDAKVEVTPRDIIYTQQAEPVQGEGPEI---LHKLDLRYGGISWCDDS----LALVYESWYKTRRTRTW 484 (953)
Q Consensus 416 ~~~~~----~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~---l~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~~l~ 484 (953)
..... ..+......+..+.|.+|++ ..++.... +..+...+..++|+|++ +.|+..+.++. .+||
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~--~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~--v~iw 243 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKE--EEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR--VFIW 243 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEE--CTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE--EEEE
T ss_pred cccccccCccccceEEEecCCCeEEEEEe--CCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe--EEEE
Confidence 00000 00000111133556778885 12222122 34455667789999997 66766655442 3555
Q ss_pred EEcCCC-CCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEee
Q 002209 485 VISPGS-KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (953)
Q Consensus 485 ~~d~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~ 529 (953)
.++... +......+ ......++. ++|+|||++|+....
T Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~v~~------v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 244 TCDDASSNTWSPKLL-HKFNDVVWH------VSWSITANILAVSGG 282 (316)
T ss_dssp ECSSTTCCCCBCCEE-EECSSCEEE------EEECTTTCCEEEEES
T ss_pred EccCccccchhhhhh-hcCCCcEEE------EEEcCCCCEEEEEcC
Confidence 544311 11111222 222223333 889999999988763
No 348
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.26 E-value=6.8e-10 Score=122.48 Aligned_cols=131 Identities=14% Similarity=0.019 Sum_probs=71.3
Q ss_pred ccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 336 ~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
...++|||+.+++.+.. +.++++|+.+...+.+..................+.+.++++|||+.++.
T Consensus 204 ~~~~~~~g~~~~~~~~~-------------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSYY-------------GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp CSCCEECSSEEEEEBTT-------------SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred EEEecccCCEEEEEeCC-------------CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 44568999988887622 37899998754433222111000000000001123345889999987654
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
.. ..++... ........|+++|+ ..++. ..+..+. ...++|||||++|+.+ +. . .|.++|++++
T Consensus 271 ~~-~~~~~~~-~~~~~~~~v~viD~---~t~~~v~~i~~~~--p~~ia~spdg~~l~v~-n~--~--~v~v~D~~t~ 335 (361)
T 2oiz_A 271 FM-HPDGKEG-THKFPAAEIWVMDT---KTKQRVARIPGRD--ALSMTIDQQRNLMLTL-DG--G--NVNVYDISQP 335 (361)
T ss_dssp EE-ESSCCTT-CTTCCCSEEEEEET---TTTEEEEEEECTT--CCEEEEETTTTEEEEE-CS--S--CEEEEECSSS
T ss_pred EE-ccCCCcc-cccCCCceEEEEEC---CCCcEEEEEecCC--eeEEEECCCCCEEEEe-CC--C--eEEEEECCCC
Confidence 42 2111110 00122458999996 33333 2333333 7889999999977654 43 2 5778888874
No 349
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1.6e-10 Score=131.40 Aligned_cols=244 Identities=10% Similarity=0.069 Sum_probs=142.4
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCC--CCCCceeeeecCC
Q 002209 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPD--GKLGQEIEIQGFP 186 (953)
Q Consensus 110 ~~~~~~~SP-DG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~--g~~~~~~~l~~~~ 186 (953)
.+..++||| ||++||..+.+ +.|.|||+... +.... ..++ +.
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~d---------------------------------g~v~vwd~~~~~~~~~~~-~~~~-~~ 109 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQ---------------------------------GVIKIWNLKEIIVGEVYS-SSLT-YD 109 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETT---------------------------------SEEEEEEHHHHHTTCCCS-CSEE-EE
T ss_pred ceEEEEECCCCCCEEEEecCC---------------------------------ceEEEeECcccccCcccc-eeee-cc
Confidence 677899999 99999998875 36799998431 11011 1111 12
Q ss_pred CCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECC---CCceeecccCCCcc--------ccccccceE--Eec
Q 002209 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD---TGKARPLFQSPDIY--------LNAIFDNFV--WVN 253 (953)
Q Consensus 187 ~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~---~g~~~~lt~~~~~~--------~~~~~~~~~--wsp 253 (953)
....+....|+||++.|+.... ...|.+++++ .++..+........ ....+..+. |++
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s~---------dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSSK---------DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEET---------TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred CCCCEEEEEEeCCCCEEEEEeC---------CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 3347899999999999887652 3455555552 34332221100000 000022222 667
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEeCC-
Q 002209 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGP- 330 (953)
Q Consensus 254 Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l~~- 330 (953)
|++.|+... ..+.|.++|+ +++ ...+..
T Consensus 181 ~~~~l~~~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 181 EKSLLVALT-------------------------------------------------NLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp SCEEEEEEE-------------------------------------------------TTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEe-------------------------------------------------CCCeEEEEeCCCCeeeEEEccC
Confidence 888877661 2356778888 664 344443
Q ss_pred -C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccce---
Q 002209 331 -P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSI--- 404 (953)
Q Consensus 331 -~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~--- 404 (953)
. ..+..++|+|||++|+..+.++ .|.+||+..+... .+.. ... ..+..+
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg-------------~i~iwd~~~~~~~~~~~~-~~~-----------~~v~~~~~~ 266 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRG-------------IIDIWDIRFNVLIRSWSF-GDH-----------APITHVEVC 266 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTS-------------CEEEEETTTTEEEEEEBC-TTC-----------EEEEEEEEC
T ss_pred CCCCceEEEEECCCCCEEEEEcCCC-------------eEEEEEcCCccEEEEEec-CCC-----------CceEEEEec
Confidence 2 6788999999999999887443 8999999865543 3321 110 123455
Q ss_pred -eeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee--------------------------cccc
Q 002209 405 -NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK--------------------------LDLR 457 (953)
Q Consensus 405 -~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~--------------------------~~~~ 457 (953)
.|+|||+.++.. +..+.|.+||+ .++.....+.. ....
T Consensus 267 ~~~s~~~~~l~s~-------------~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 331 (437)
T 3gre_A 267 QFYGKNSVIVVGG-------------SSKTFLTIWNF--VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNA 331 (437)
T ss_dssp TTTCTTEEEEEEE-------------STTEEEEEEET--TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGG
T ss_pred cccCCCccEEEEE-------------cCCCcEEEEEc--CCCcEEEEEEcCCCCCccceecccccccccceecccccCCc
Confidence 556677655544 44557889986 22222222322 2223
Q ss_pred cCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 458 ~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
+..++|+ +++.|+..+.++ .|.++|+.++
T Consensus 332 v~~l~~~-~~~~l~s~~~d~----~i~~wd~~~~ 360 (437)
T 3gre_A 332 LSTISVS-NDKILLTDEATS----SIVMFSLNEL 360 (437)
T ss_dssp GCCEEEE-TTEEEEEEGGGT----EEEEEETTCG
T ss_pred eEEEEEC-CceEEEecCCCC----eEEEEECCCc
Confidence 4567788 677666654433 5666677664
No 350
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.25 E-value=1.3e-09 Score=120.42 Aligned_cols=135 Identities=9% Similarity=-0.039 Sum_probs=77.0
Q ss_pred cccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCce
Q 002209 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (953)
Q Consensus 335 ~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~ 414 (953)
..+.+++|+..++|.+.. +.++++|+.+...+.+...+..............+...+.++|||++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~-------------~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 216 TQPAQANKSGRIVWPVYS-------------GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred ecceeEecCCEEEEEcCC-------------ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 346778888888887632 3788999876544433322111000000000112223477899998776
Q ss_pred EEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
...+....+ ......+.|+++|+ ...+. ..+ .......+++|||||++++|..+.... .|.++|+.++
T Consensus 283 V~~~~~~~~---~~~~~~~~V~VID~---~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~~--~V~ViD~~t~ 351 (373)
T 2mad_H 283 LLTSEQSAW---KLHAAAKEVTSVTG---LVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSAGTE--VLHIYDAGAG 351 (373)
T ss_pred EEeccCCcc---cccCCCCeEEEEEC---CCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEcCCCC--eEEEEECCCC
Confidence 653321100 00122458999996 44443 344 333356789999999977777664333 7999999885
No 351
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.25 E-value=9e-09 Score=119.55 Aligned_cols=322 Identities=10% Similarity=0.017 Sum_probs=176.3
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECC--CCcee-ecccCCCc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKAR-PLFQSPDI 240 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~--~g~~~-~lt~~~~~ 240 (953)
.|+++|..+ + ..... ++.+.....+.+||||++|+...+ ...|.++|+. +++.. ++.. ...
T Consensus 178 ~V~viD~~t-~--~v~~~---i~~g~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~~~t~~~v~~i~~-G~~ 241 (567)
T 1qks_A 178 QIALIDGST-Y--EIKTV---LDTGYAVHISRLSASGRYLFVIGR---------DGKVNMIDLWMKEPTTVAEIKI-GSE 241 (567)
T ss_dssp EEEEEETTT-C--CEEEE---EECSSCEEEEEECTTSCEEEEEET---------TSEEEEEETTSSSCCEEEEEEC-CSE
T ss_pred eEEEEECCC-C--eEEEE---EeCCCCccceEECCCCCEEEEEcC---------CCeEEEEECCCCCCcEeEEEec-CCC
Confidence 678988743 2 11222 333445568899999998876431 3479999995 55433 2322 211
Q ss_pred cccccccceEEe----cCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceE
Q 002209 241 YLNAIFDNFVWV----NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQL 316 (953)
Q Consensus 241 ~~~~~~~~~~ws----pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 316 (953)
...+++| |||++++++. +...++
T Consensus 242 -----P~~ia~s~~~~pDGk~l~v~n------------------------------------------------~~~~~v 268 (567)
T 1qks_A 242 -----ARSIETSKMEGWEDKYAIAGA------------------------------------------------YWPPQY 268 (567)
T ss_dssp -----EEEEEECCSTTCTTTEEEEEE------------------------------------------------EETTEE
T ss_pred -----CceeEEccccCCCCCEEEEEE------------------------------------------------ccCCeE
Confidence 3478899 6999998771 022456
Q ss_pred EEEEc-CCceeE-eCCC------------CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEec
Q 002209 317 VLVSL-DGTVKE-IGPP------------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELC 382 (953)
Q Consensus 317 ~~~~~-~g~~~~-l~~~------------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~ 382 (953)
.++|. +.++.. +... ..+..+..|+++..+++... ..+.|+++|........++
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~------------~~g~v~~vd~~~~~~~~v~ 336 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK------------ETGKILLVDYTDLNNLKTT 336 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET------------TTTEEEEEETTCSSEEEEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec------------CCCeEEEEecCCCccceee
Confidence 67776 554332 2211 12345667888776665541 2358888888643222222
Q ss_pred cCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec--ccc--c
Q 002209 383 DLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLR--Y 458 (953)
Q Consensus 383 ~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~--~~~--~ 458 (953)
..+.. .....+.|+|||+.++... ...+.|.++|+ ..++....... ... .
T Consensus 337 ~i~~~-----------~~~~d~~~~pdgr~~~va~------------~~sn~V~ViD~---~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 337 EISAE-----------RFLHDGGLDGSHRYFITAA------------NARNKLVVIDT---KEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp EEECC-----------SSEEEEEECTTSCEEEEEE------------GGGTEEEEEET---TTTEEEEEEECSSSSBCCT
T ss_pred eeecc-----------ccccCceECCCCCEEEEEe------------CCCCeEEEEEC---CCCcEEEEEeccCcCCCCc
Confidence 21110 1123578999999655541 23567999996 43433222221 111 1
Q ss_pred CCee-eccCCceEEEEEecccCceEEEEEcCCCCCC---CcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCC
Q 002209 459 GGIS-WCDDSLALVYESWYKTRRTRTWVISPGSKDV---APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDE 534 (953)
Q Consensus 459 ~~~~-~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~ 534 (953)
..+. +.||++.++++.+.+.. .+-+++.+.+.. ..+.+....... .++..+..+|||++|+.....
T Consensus 391 ~g~~~~~p~~g~v~~t~~~g~~--~Vsvid~~~~~~~~~~~kvv~~i~~~g----~g~~~i~~~p~~~~l~v~~~~---- 460 (567)
T 1qks_A 391 RGANFVHPTFGPVWATSHMGDD--SVALIGTDPEGHPDNAWKILDSFPALG----GGSLFIKTHPNSQYLYVDATL---- 460 (567)
T ss_dssp TCEEEEETTTEEEEEEEBSSSS--EEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCSEEEEECTT----
T ss_pred cceeeECCCCCcEEEeCCCCCC--eEEEecCCCCCCccccCEEEEEEecCC----CCCEEEEeCCCCCeEEEecCC----
Confidence 2444 47888887766544333 577888766211 011211111000 122226789999998765410
Q ss_pred CcEEEEecCCCCCCC-CCCeEEEEECCCCce-------EEEecc------CcccceeeeEeeccCCccccccccCCEEEE
Q 002209 535 GTYILLNGNGATPEG-NIPFLDLFDINTGSK-------ERIWES------DKEKYYETTVALMSDQTEGDLYLNQLKILT 600 (953)
Q Consensus 535 ~~~~~~~~~~~~~~~-~~~~L~~~d~~~~~~-------~~l~~~------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 600 (953)
.++. ....+.++|+++.+. +.|.-. ++. ..+. .+.|++||+++++
T Consensus 461 -----------~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~G~~~~~ 519 (567)
T 1qks_A 461 -----------NPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQ---PRVV-------QGEFNKDGTEVWF 519 (567)
T ss_dssp -----------CSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSC---CEEE-------EEEECTTSSEEEE
T ss_pred -----------CCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCC---cceE-------eeeECCCCCEEEE
Confidence 0000 012589999876511 223111 000 0011 2578999999999
Q ss_pred EEecCC-CCceEEEEECCCCCeeE
Q 002209 601 SKESKT-ENTQYYIQSWPDKKSCQ 623 (953)
Q Consensus 601 ~~~~~~-~p~~l~~~~~~~g~~~~ 623 (953)
+.+... ....|.++|..+++.+.
T Consensus 520 s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 520 SVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp EEECCTTSCCEEEEEETTTTEEEE
T ss_pred EeecCCCCCCcEEEEECCCceEEE
Confidence 866533 45679999988886543
No 352
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.24 E-value=4.8e-10 Score=122.20 Aligned_cols=238 Identities=15% Similarity=0.164 Sum_probs=136.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCC---C-ceeeeecC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL---G-QEIEIQGF 185 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~---~-~~~~l~~~ 185 (953)
.+..++|||||++||..+.+ +.|.||++...... . ....+.++
T Consensus 60 ~v~~v~~sp~~~~las~s~D---------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFD---------------------------------STVSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEEC-------CCCEEEEEEC--
T ss_pred CEEEEEECCCCCEEEEEeCC---------------------------------CcEEEEEcccCcCccccceeEEEEcCC
Confidence 56789999999999988875 36789987421100 0 11223222
Q ss_pred CCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECC-CCc---ee-ecccCCCccccccccceEEecCCeEEEE
Q 002209 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD-TGK---AR-PLFQSPDIYLNAIFDNFVWVNNSTLLVC 260 (953)
Q Consensus 186 ~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~-~g~---~~-~lt~~~~~~~~~~~~~~~wspDg~~l~~ 260 (953)
...+....|||||++|+.... ...|.++|+. +++ .. .+..+.. .+..+.|+|||+.|+.
T Consensus 107 --~~~V~~v~~sp~g~~las~s~---------D~~v~iwd~~~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 107 --ENEVKGVAWSNDGYYLATCSR---------DKSVWIWETDESGEEYECISVLQEHSQ-----DVKHVIWHPSEALLAS 170 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEET---------TSCEEEEECCTTCCCCEEEEEECCCSS-----CEEEEEECSSSSEEEE
T ss_pred --CCcEEEEEECCCCCEEEEEeC---------CCEEEEEeccCCCCCeEEEEEeccCCC-----ceEEEEECCCCCEEEE
Confidence 236889999999999988652 4567777773 322 11 2222222 2778999999998886
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC---ceeEeCCC-Cccc
Q 002209 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYT 335 (953)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g---~~~~l~~~-~~~~ 335 (953)
.. ..+.|.++++ ++ ....+... ..+.
T Consensus 171 ~s-------------------------------------------------~D~~i~iW~~~~~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 171 SS-------------------------------------------------YDDTVRIWKDYDDDWECVAVLNGHEGTVW 201 (330)
T ss_dssp EE-------------------------------------------------TTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred Ec-------------------------------------------------CCCeEEEEECCCCCeeEEEEccCCCCcEE
Confidence 61 1123444555 44 23334444 6778
Q ss_pred ccccCCC--CcEEEEEEecCCccccccCCCCCcceEEEeccCce------EEEeccCCCcccCCccccccccCccceeec
Q 002209 336 SLDPSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF------VRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (953)
Q Consensus 336 ~~~~SpD--G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~------~~~l~~~~~~~~~p~~~~~~~~~~~~~~ws 407 (953)
.++|+|| +..|+..+.+ +.|.+|++.++. ...+...+. .....+..++|+
T Consensus 202 ~~~~~~~~~~~~l~s~s~D-------------~~v~iw~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~v~~s 259 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSDD-------------STVRVWKYMGDDEDDQQEWVCEAILPD---------VHKRQVYNVAWG 259 (330)
T ss_dssp EEEECCSSSSCEEEEEETT-------------SCEEEEEEEEECTTSCEEEEEEEECCS---------CCSSCEEEEEEC
T ss_pred EEEecCCCCeeEEEEEeCC-------------CeEEEEEecCCCccccceeEEeeeccc---------ccccceEEEEEc
Confidence 8999999 6677766644 389999986431 011111110 012345678999
Q ss_pred cCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEE----eeccc-ccCCeeecc--CCceEEEEEecccCc
Q 002209 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL----HKLDL-RYGGISWCD--DSLALVYESWYKTRR 480 (953)
Q Consensus 408 pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l----~~~~~-~~~~~~~Sp--Dg~~l~~~~~~~~~~ 480 (953)
+++ .|+.. +..+.|.+|+. ..++.+.+ ..+.. .+..++|+| |++.|+..+.++.
T Consensus 260 ~~~-~l~s~-------------~~dg~v~iw~~---~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~-- 320 (330)
T 2hes_X 260 FNG-LIASV-------------GADGVLAVYEE---VDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI-- 320 (330)
T ss_dssp TTS-CEEEE-------------ETTSCEEEEEE---ETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE--
T ss_pred CCC-EEEEE-------------eCCCEEEEEEc---CCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCc--
Confidence 766 34433 34557888885 33322222 12222 566789999 7888887765542
Q ss_pred eEEEEE
Q 002209 481 TRTWVI 486 (953)
Q Consensus 481 ~~l~~~ 486 (953)
.+||.+
T Consensus 321 v~~W~~ 326 (330)
T 2hes_X 321 VNFWSL 326 (330)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 355543
No 353
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.23 E-value=2.3e-10 Score=127.07 Aligned_cols=117 Identities=11% Similarity=-0.014 Sum_probs=79.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc---------CcEEEE
Q 002209 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR---------GFAILG 717 (953)
Q Consensus 647 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~---------G~~V~~ 717 (953)
.+|..|+...+.+.. +..|.||++||.+... ..+. .....|++. ||.|++
T Consensus 75 i~g~~i~~~~~~~~~------~~~~plll~HG~~~s~--------------~~~~-~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 75 IDGATIHFLHVRSPE------PDATPMVITHGWPGTP--------------VEFL-DIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp ETTEEEEEEEECCSS------TTCEEEEEECCTTCCG--------------GGGH-HHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred ECCeEEEEEEccCCC------CCCCeEEEECCCCCCH--------------HHHH-HHHHHHhCcccccCCCCCCeEEEE
Confidence 488999987776542 1257799999975221 1111 233445554 999999
Q ss_pred cCCCCCCCCCChhhhhh---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 718 GPTTPIIGEGDEEANDR---FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 718 ~~~~~~~G~G~~~~~~~---~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+ +..|+|.+..... .......|+.+.++.+ ..+++.++||||||.+++.++.++|++++++++.++.
T Consensus 134 ~---dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~l------g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 134 P---SLPGFGLSGPLKSAGWELGRIAMAWSKLMASL------GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp E---CCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHT------TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred E---cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 4 4467777754321 2344455554444432 2358999999999999999999999999999999864
No 354
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.3e-10 Score=141.74 Aligned_cols=240 Identities=12% Similarity=0.127 Sum_probs=150.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCC-CC
Q 002209 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (953)
Q Consensus 110 ~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~-~~ 188 (953)
.+..++|||||++|+....+ +.|.||++.. +....+..+. +.
T Consensus 11 ~V~~l~~s~dg~~latg~~d---------------------------------g~I~vwd~~~----~~~~~~~~l~~h~ 53 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSD---------------------------------KTIKIFEVEG----ETHKLIDTLTGHE 53 (753)
T ss_dssp CEEEECCCSSSCCEEEEETT---------------------------------TEEEEEEEET----TEEEEEEEECCCS
T ss_pred eeEEEEECCCCCeEEEEECC---------------------------------CcEEEEecCC----CCCccceeccCCc
Confidence 56778999999999988765 3678999852 2222222222 22
Q ss_pred CcccceEeccC--CCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC--CeEEEEEecC
Q 002209 189 AKLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPL 264 (953)
Q Consensus 189 ~~~~~~~wSPD--G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD--g~~l~~~~~~ 264 (953)
..+....|+|+ |+.|+.... +..|.++++.+++...+..... ....+..++|+|+ |+.|+++.
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~---------Dg~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs-- 120 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSY---------DGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVAS-- 120 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEET---------TSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEE--
T ss_pred CceEEEEecCCCCCCEEEEEeC---------CCeEEEEECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEe--
Confidence 47899999998 888888652 4567777777775222211111 1112778999999 88888761
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC---ceeEeCCC-Cccccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYTSLDP 339 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g---~~~~l~~~-~~~~~~~~ 339 (953)
..+.|.++|+ ++ ....+... ..+..+.|
T Consensus 121 -----------------------------------------------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 121 -----------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp -----------------------------------------------TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE
T ss_pred -----------------------------------------------CCCcEEEEEeecCCCcceeEeecCCCceEEEEe
Confidence 2245667777 44 22233333 67888999
Q ss_pred CC-------------CCcEEEEEEecCCccccccCCCCCcceEEEeccCce-E-EEeccCCCcccCCccccccccCccce
Q 002209 340 SP-------------DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-V-RELCDLPLAEDIPIAFNSVRKGMRSI 404 (953)
Q Consensus 340 Sp-------------DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~-~~l~~~~~~~~~p~~~~~~~~~~~~~ 404 (953)
+| ||+.|+..+.++ .|.+||+.++. . ..+.... +....+..+
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg-------------~I~iwd~~~~~~~~~~~~~~~----------~h~~~V~~l 210 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGADN-------------LVKIWKYNSDAQTYVLESTLE----------GHSDWVRDV 210 (753)
T ss_dssp CCCC---------CGGGCCEEEEETTS-------------CEEEEEEETTTTEEEEEEEEC----------CCSSCEEEE
T ss_pred cCcccccccccccCCCCCEEEEEECCC-------------eEEEEeccCCcccceeeeeec----------CCCCcEEEE
Confidence 99 688888887443 89999997542 1 1111111 112345689
Q ss_pred eeccC---CCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC---ceEE---eecccccCCeeeccCCceEEEEEe
Q 002209 405 NWRSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEIL---HKLDLRYGGISWCDDSLALVYESW 475 (953)
Q Consensus 405 ~wspD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~---~~~l---~~~~~~~~~~~~SpDg~~l~~~~~ 475 (953)
+|+|| |+.++.. +..+.|.+|++ ..+. ...+ ......+..++|+|||+.|+..+.
T Consensus 211 ~~sp~~~~~~~l~s~-------------s~Dg~I~iwd~---~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 211 AWSPTVLLRSYLASV-------------SQDRTCIIWTQ---DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp EECCCCSSSEEEEEE-------------ESSSCEEEEEE---SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred EeccCCCCCCEEEEE-------------ecCCEEEEecC---CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 99999 6655554 44567888886 2221 1111 224556778999999999888765
Q ss_pred cccCceEEEEEcCC
Q 002209 476 YKTRRTRTWVISPG 489 (953)
Q Consensus 476 ~~~~~~~l~~~d~~ 489 (953)
++ .+++++..
T Consensus 275 Dg----~I~vwd~~ 284 (753)
T 3jro_A 275 DN----KVTLWKEN 284 (753)
T ss_dssp SS----CEECCBCC
T ss_pred CC----EEEEEecC
Confidence 43 34444544
No 355
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.20 E-value=2e-10 Score=132.71 Aligned_cols=264 Identities=8% Similarity=0.019 Sum_probs=147.0
Q ss_pred CCCCceecCC------CCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCC------
Q 002209 110 PLPALSFSPQ------RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLG------ 177 (953)
Q Consensus 110 ~~~~~~~SPD------G~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~------ 177 (953)
.+..++|||+ |+.||..+.+ +.|.||++.......
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~D---------------------------------gtvrlWd~~~~~~~~~~~~~~ 255 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQE---------------------------------GTINFLEIIDNATDVHVFKMC 255 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETT---------------------------------SCEEEEECCCCSSSSSEEECC
T ss_pred cEEEEEECCCCCCCCCCceEEEEecC---------------------------------CeEEEEEcCCCccccccceee
Confidence 4567788886 5677777765 367899985321100
Q ss_pred --ceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc-eee-cccCCCccccccccce--EE
Q 002209 178 --QEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-ARP-LFQSPDIYLNAIFDNF--VW 251 (953)
Q Consensus 178 --~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~-~~~-lt~~~~~~~~~~~~~~--~w 251 (953)
....+.. ....+....|+|++ .|+... .+..|.++|+++++ +.. +..+.. . +..+ .|
T Consensus 256 ~~p~~~l~~--h~~~v~sv~~s~~~-~lasgs---------~DgtV~lWD~~~~~~~~~~~~~H~~-~----V~sv~~~~ 318 (524)
T 2j04_B 256 EKPSLTLSL--ADSLITTFDFLSPT-TVVCGF---------KNGFVAEFDLTDPEVPSFYDQVHDS-Y----ILSVSTAY 318 (524)
T ss_dssp CSCSEEECC--TTTCEEEEEESSSS-EEEEEE---------TTSEEEEEETTBCSSCSEEEECSSS-C----EEEEEEEC
T ss_pred cCceEEEEc--CCCCEEEEEecCCC-eEEEEe---------CCCEEEEEECCCCCCceEEeecccc-c----EEEEEEEc
Confidence 0112222 22468889999875 666543 35688888988653 222 222222 2 6666 57
Q ss_pred ecCC-eEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEe
Q 002209 252 VNNS-TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEI 328 (953)
Q Consensus 252 spDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l 328 (953)
+||| +.|+.+. ..+.+.++|+ +++. ..+
T Consensus 319 s~~g~~~laS~S-------------------------------------------------~D~tvklWD~~~~~~~~~~ 349 (524)
T 2j04_B 319 SDFEDTVVSTVA-------------------------------------------------VDGYFYIFNPKDIATTKTT 349 (524)
T ss_dssp CTTSCCEEEEEE-------------------------------------------------TTSEEEEECGGGHHHHCEE
T ss_pred CCCCCeEEEEec-------------------------------------------------cCCeEEEEECCCCCccccc
Confidence 8998 6777551 1235556677 5532 112
Q ss_pred CC--C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccce
Q 002209 329 GP--P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSI 404 (953)
Q Consensus 329 ~~--~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~ 404 (953)
.. . ..+..++|||||+.++..+.+ +.|.+||+..+. ...+..+. ..+.++
T Consensus 350 ~~~~~~~~v~~v~fsp~~~~l~s~~~d-------------~tv~lwd~~~~~~~~~l~gH~-------------~~V~sv 403 (524)
T 2j04_B 350 VSRFRGSNLVPVVYCPQIYSYIYSDGA-------------SSLRAVPSRAAFAVHPLVSRE-------------TTITAI 403 (524)
T ss_dssp EEECSCCSCCCEEEETTTTEEEEECSS-------------SEEEEEETTCTTCCEEEEECS-------------SCEEEE
T ss_pred ccccccCcccceEeCCCcCeEEEeCCC-------------CcEEEEECcccccceeeecCC-------------CceEEE
Confidence 11 1 246789999999998776633 279999987543 33343322 345789
Q ss_pred eeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee-----cccccCCeeeccCCceEEEEEecccC
Q 002209 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-----LDLRYGGISWCDDSLALVYESWYKTR 479 (953)
Q Consensus 405 ~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~-----~~~~~~~~~~SpDg~~l~~~~~~~~~ 479 (953)
+|||||+.|+-. +..+.+.+|++ ..+....+.. ....+..++|||||+.+.. ++. .
T Consensus 404 a~Sp~g~~l~Sg-------------s~Dgtv~lwd~---~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~~~-~ 464 (524)
T 2j04_B 404 GVSRLHPMVLAG-------------SADGSLIITNA---ARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--DSS-Y 464 (524)
T ss_dssp ECCSSCCBCEEE-------------ETTTEEECCBS---CSSTTTCC------CCCCEEEECBCCSSSCEEEE--CCC-C
T ss_pred EeCCCCCeEEEE-------------ECCCEEEEEec---hHhhccccccCccceeeeEEEEeccCCCCCeEEc--cCC-c
Confidence 999999987655 44567888885 2221111110 0112346789999985432 221 1
Q ss_pred ceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCC---EEEEEe
Q 002209 480 RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGT---YVIAKI 528 (953)
Q Consensus 480 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~---~l~~~~ 528 (953)
.+|..+..+ ............+.. ++|+||+. +++...
T Consensus 465 --~~~~~~~~g---~~~~~l~gh~~~V~~------Vafsp~~~~~~~lAsg~ 505 (524)
T 2j04_B 465 --EVYPLTVND---VSKAKIDAHGINITC------TKWNETSAGGKCYAFSN 505 (524)
T ss_dssp --CCCC----------------CCCSCCC------EEECCSTTTTTEEEEEC
T ss_pred --eecccccCC---cceeeecCCCceEEE------EECCCCCCccHHHHhhc
Confidence 233222222 111112222233343 89999964 887775
No 356
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.19 E-value=2.3e-08 Score=110.37 Aligned_cols=283 Identities=10% Similarity=-0.000 Sum_probs=146.8
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeecccc-CCCCcceEEEEECCCCceeecccCC-Ccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAED-SSSSKLRVWVADVDTGKARPLFQSP-DIY 241 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~-~~~~~~~l~~~d~~~g~~~~lt~~~-~~~ 241 (953)
.|.++|..+ ++ .+..++.+... .+.+||||++|+++....... .+.....|.++|+++++...-...+ ...
T Consensus 48 ~v~v~D~~t----~~--~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGS----GS--ILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCC----Ce--EEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 467888743 22 12224444444 899999999999875321000 0112456889999887654322212 000
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 242 ~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
. ......+.|||||++|+++... ....|+++
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~-----------------------------------------------~~~~v~vi 153 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFA-----------------------------------------------AGPAVGLV 153 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecC-----------------------------------------------CCCeEEEE
Confidence 0 0013478999999999987100 11346666
Q ss_pred EcCCcee-E-eCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCC-cccCCccccc
Q 002209 320 SLDGTVK-E-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPL-AEDIPIAFNS 396 (953)
Q Consensus 320 ~~~g~~~-~-l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~-~~~~p~~~~~ 396 (953)
|.+++.. . +..++. +.+.|+|+..++.... .+.+.+++..++........+. ....|.
T Consensus 154 D~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~------------dg~~~~vd~~g~~~~~~~~~~~~~~~~p~---- 214 (373)
T 2mad_H 154 VQGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCA------------QGGLAKTDHAGGAAGAGLVGAMLTAAQNL---- 214 (373)
T ss_pred ECCCCEEeEEcCCCce---EEEEeCCCceEEEEcC------------CCCEEEEECCCcEEEEEeccccccCCcce----
Confidence 6223322 2 222121 3455666655443311 2255566662222212111000 000111
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec----------ccccC---Ceee
Q 002209 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------DLRYG---GISW 463 (953)
Q Consensus 397 ~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~----------~~~~~---~~~~ 463 (953)
...+.+++|+..++|. ...+.++++|. .++..+.+... .+... .+.+
T Consensus 215 ----~~~~~~~~~~~~~~~~-------------~~~~~v~vid~---~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 215 ----LTQPAQANKSGRIVWP-------------VYSGKILQADI---SAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred ----eecceeEecCCEEEEE-------------cCCceEEEEec---cCCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 1235678888777666 22447888885 33332222110 11111 2678
Q ss_pred ccCCceEEEEEecc------cCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcE
Q 002209 464 CDDSLALVYESWYK------TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTY 537 (953)
Q Consensus 464 SpDg~~l~~~~~~~------~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~ 537 (953)
+|||++|+...... .....|+++|+.++. ....+.-.. ...+ +.|||||++++|..+..
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~-vv~~i~~g~--~p~~------i~~s~Dg~~~l~v~~~~------ 339 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ-TSSQISLGH--DVDA------ISVAQDGGPDLYALSAG------ 339 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE-EEEEEECCC--CcCe------EEECCCCCeEEEEEcCC------
Confidence 99999888765321 112479999998852 112222111 1111 88999999777765321
Q ss_pred EEEecCCCCCCCCCCeEEEEECCCCceEEE
Q 002209 538 ILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (953)
Q Consensus 538 ~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l 567 (953)
...|.++|+++++....
T Consensus 340 -------------~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 340 -------------TEVLHIYDAGAGDQDQS 356 (373)
T ss_pred -------------CCeEEEEECCCCCEEee
Confidence 12599999999887655
No 357
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.19 E-value=5.8e-10 Score=119.06 Aligned_cols=209 Identities=15% Similarity=0.124 Sum_probs=120.9
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G 725 (953)
..+|..++.... + .-|.||++||.+.... .| . ... ..++.+|.|+++ +..|
T Consensus 11 ~~~~~~~~~~~~---g-------~g~~~vllHG~~~~~~-----------~w---~-~~~-~~l~~~~~vi~~---Dl~G 61 (291)
T 3qyj_A 11 DTTEARINLVKA---G-------HGAPLLLLHGYPQTHV-----------MW---H-KIA-PLLANNFTVVAT---DLRG 61 (291)
T ss_dssp ECSSCEEEEEEE---C-------CSSEEEEECCTTCCGG-----------GG---T-TTH-HHHTTTSEEEEE---CCTT
T ss_pred ecCCeEEEEEEc---C-------CCCeEEEECCCCCCHH-----------HH---H-HHH-HHHhCCCEEEEE---cCCC
Confidence 347778876543 1 1467889999642211 12 1 112 234578999994 5567
Q ss_pred CCChhhhh-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCC---
Q 002209 726 EGDEEAND-------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN--- 795 (953)
Q Consensus 726 ~G~~~~~~-------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d--- 795 (953)
+|.+..+. ........|+.+.++.+ + .+++.++||||||.+++.++.++|++++++|++++...
T Consensus 62 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~ 135 (291)
T 3qyj_A 62 YGDSSRPASVPHHINYSKRVMAQDQVEVMSKL---G---YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKM 135 (291)
T ss_dssp STTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT---T---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHH
T ss_pred CCCCCCCCCCccccccCHHHHHHHHHHHHHHc---C---CCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchh
Confidence 77764321 12445566666655443 2 35899999999999999999999999999998764210
Q ss_pred --CC--------------CCCcCccc----cc--------------c-hhh--hhH-----------------HHHHhcC
Q 002209 796 --RT--------------LTPFGFQN----ED--------------R-TLW--EAT-----------------STYVEMS 821 (953)
Q Consensus 796 --~~--------------~~~~~~~~----~~--------------~-~~~--~~~-----------------~~~~~~s 821 (953)
.. ..+..... .. . ... +.. ..|....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (291)
T 3qyj_A 136 YRTTDQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAA 215 (291)
T ss_dssp HHTCCHHHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHT
T ss_pred hhcchhhhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHccc
Confidence 00 00000000 00 0 000 000 0011100
Q ss_pred -------cccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002209 822 -------PFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (953)
Q Consensus 822 -------p~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 894 (953)
......++++|+|+++|++|..++ ..... +..+.....++..+++ +||.+ ..++.+.+.+.|.+||
T Consensus 216 ~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~--~~~~~---~~~~~~~~~~~~~~~~-~GH~~-~~E~P~~v~~~i~~fL 288 (291)
T 3qyj_A 216 TIDLEHDELDMKQKISCPVLVLWGEKGIIGR--KYDVL---ATWRERAIDVSGQSLP-CGHFL-PEEAPEETYQAIYNFL 288 (291)
T ss_dssp THHHHHHHTTTTCCBCSCEEEEEETTSSHHH--HSCHH---HHHHTTBSSEEEEEES-SSSCH-HHHSHHHHHHHHHHHH
T ss_pred ccchhhcchhcCCccccceEEEecccccccc--hhhHH---HHHHhhcCCcceeecc-CCCCc-hhhCHHHHHHHHHHHH
Confidence 011346789999999999996532 11111 2222333456777787 79965 5677888999999998
Q ss_pred HH
Q 002209 895 QK 896 (953)
Q Consensus 895 ~~ 896 (953)
.+
T Consensus 289 ~~ 290 (291)
T 3qyj_A 289 TH 290 (291)
T ss_dssp HC
T ss_pred hc
Confidence 64
No 358
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.19 E-value=1.5e-08 Score=111.60 Aligned_cols=280 Identities=13% Similarity=0.072 Sum_probs=144.2
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccc-cCCCCcceEEEEECCCCceeecccCCCcc
Q 002209 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (953)
Q Consensus 163 ~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~-~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 241 (953)
+.|+++|..+ ++ .... ++.+... .++|||||++|+........ ..+.....|.++|+++++...-...+...
T Consensus 31 ~~v~v~D~~t-~~--~~~~---i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 31 SRVHVYDYTN-GK--FLGM---VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp CEEEEEETTT-CC--EEEE---EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred CeEEEEECCC-Ce--EEEE---ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 3678999743 21 1222 3333444 88999999998876532100 01122456899999887654322211000
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 242 ~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
. ......++++|||++|+++.. . ....|.++
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~--------------------------------------~---------~~~~v~v~ 136 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNA--------------------------------------S---------PATSIGIV 136 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEE--------------------------------------S---------SSEEEEEE
T ss_pred cccCCCcceEEECCCCCEEEEECC--------------------------------------C---------CCCeEEEE
Confidence 0 001457899999999997610 0 12467788
Q ss_pred Ec-CCcee-E-eCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC-ceEE-EeccCCCcccCCccc
Q 002209 320 SL-DGTVK-E-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFVR-ELCDLPLAEDIPIAF 394 (953)
Q Consensus 320 ~~-~g~~~-~-l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g-~~~~-~l~~~~~~~~~p~~~ 394 (953)
|+ +++.. . +..++ ...+.+.|+|+..+++... .+.+..++.+. +... .........
T Consensus 137 d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~------------dg~~~~v~~~~~g~~~~~~~~~~~~~------ 197 (361)
T 2oiz_A 137 DVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICG------------DGGLLTINLGEDGKVASQSRSKQMFS------ 197 (361)
T ss_dssp ETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEET------------TSSEEEEEECTTSSEEEEEECCCCSC------
T ss_pred ECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECC------------CCcEEEEEECCCCcEeeeccccceEc------
Confidence 88 66433 2 22211 1113455665433332211 12444444432 2211 111000000
Q ss_pred cccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec-------------ccccCCe
Q 002209 395 NSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-------------DLRYGGI 461 (953)
Q Consensus 395 ~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~-------------~~~~~~~ 461 (953)
...+...+.+++||+.+++. ...+.++++|+ .++....+... ......+
T Consensus 198 --~~~~~~~~~~~~~g~~~~~~-------------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 198 --VKDDPIFIAPALDKDKAHFV-------------SYYGNVYSADF---SGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp --TTTSCBCSCCEECSSEEEEE-------------BTTSEEEEEEC---SSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred --CCCCceEEEecccCCEEEEE-------------eCCCeEEEEEe---cCCCceecccccccCccccccccccCCeeEE
Confidence 00112234567888776665 33457888885 33333322110 0111237
Q ss_pred eeccCCceEEEEEeccc-------CceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCC
Q 002209 462 SWCDDSLALVYESWYKT-------RRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDE 534 (953)
Q Consensus 462 ~~SpDg~~l~~~~~~~~-------~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~ 534 (953)
+++|||++++.....+. ....++++|+.++ +......... ..+ +.|||||++|+....
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--~~v~~i~~~~--p~~------ia~spdg~~l~v~n~----- 324 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--QRVARIPGRD--ALS------MTIDQQRNLMLTLDG----- 324 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--EEEEEEECTT--CCE------EEEETTTTEEEEECS-----
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--cEEEEEecCC--eeE------EEECCCCCEEEEeCC-----
Confidence 89999998876643111 1237999999885 2222111111 222 889999997764321
Q ss_pred CcEEEEecCCCCCCCCCCeEEEEECCCCceE
Q 002209 535 GTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (953)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~ 565 (953)
..|.+||.++++++
T Consensus 325 -----------------~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 325 -----------------GNVNVYDISQPEPK 338 (361)
T ss_dssp -----------------SCEEEEECSSSSCE
T ss_pred -----------------CeEEEEECCCCcce
Confidence 24999999999333
No 359
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.19 E-value=1.8e-10 Score=124.69 Aligned_cols=196 Identities=15% Similarity=0.135 Sum_probs=116.4
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCCCCChhhh---hhhHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEA 745 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~ 745 (953)
.|.||++||+.... ..| ......|++ .+|.|++ .|.+|+|.+... .......++|+.+
T Consensus 38 ~p~lvllHG~~~~~-----------~~w----~~~~~~L~~~~~~~via---~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ 99 (316)
T 3c5v_A 38 GPVLLLLHGGGHSA-----------LSW----AVFTAAIISRVQCRIVA---LDLRSHGETKVKNPEDLSAETMAKDVGN 99 (316)
T ss_dssp SCEEEEECCTTCCG-----------GGG----HHHHHHHHTTBCCEEEE---ECCTTSTTCBCSCTTCCCHHHHHHHHHH
T ss_pred CcEEEEECCCCccc-----------ccH----HHHHHHHhhcCCeEEEE---ecCCCCCCCCCCCccccCHHHHHHHHHH
Confidence 47899999963211 011 123344544 2899999 555788887542 1236778899999
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh--CCCcccEEEEcccCCCCC------------CCCcCcccc-----
Q 002209 746 AVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYNRT------------LTPFGFQNE----- 806 (953)
Q Consensus 746 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~d~~------------~~~~~~~~~----- 806 (953)
.++.+... + .+++.|+||||||.+|+.+|.+ +|+ ++++|++++..... ..+..+...
T Consensus 100 ~l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3c5v_A 100 VVEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIE 175 (316)
T ss_dssp HHHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHH
T ss_pred HHHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHH
Confidence 98887421 1 2589999999999999999995 566 88888876421000 000000000
Q ss_pred -------cchhhhh----HHHHHh-------------------cCc--------------ccccCCCCCcEEEEEeCCCC
Q 002209 807 -------DRTLWEA----TSTYVE-------------------MSP--------------FMSANKLKKPILLVHGEEDN 842 (953)
Q Consensus 807 -------~~~~~~~----~~~~~~-------------------~sp--------------~~~~~~i~~P~Li~~G~~D~ 842 (953)
....... +..+.. ... ...+.++++|+|+++|+.|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~ 255 (316)
T 3c5v_A 176 WSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDR 255 (316)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCC
T ss_pred HhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccc
Confidence 0000000 000000 000 00112578999999999997
Q ss_pred CCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 843 NSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 843 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
..+ .... ..+. ...+++++|++||... .+..+.+.+.+.+||.+.
T Consensus 256 ~~~--~~~~----~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 256 LDK--DLTI----GQMQ---GKFQMQVLPQCGHAVH-EDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp CCH--HHHH----HHHT---TCSEEEECCCCSSCHH-HHSHHHHHHHHHHHHHHT
T ss_pred ccc--HHHH----HhhC---CceeEEEcCCCCCccc-ccCHHHHHHHHHHHHHhc
Confidence 643 2211 1222 2358999999999863 566778889999999764
No 360
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.18 E-value=1.1e-08 Score=110.28 Aligned_cols=282 Identities=12% Similarity=0.112 Sum_probs=163.1
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
+.+...||||+ .||... +..|+++|+++|+..++..... ....+..++|+|||+.|+...
T Consensus 27 y~~~l~WS~~~-~lAvg~----------D~tV~iWd~~tg~~~~~~~~~~--~~~~V~~v~~~~~~~~l~sgs------- 86 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVAL----------DNSVYLWSASSGDILQLLQMEQ--PGEYISSVAWIKEGNYLAVGT------- 86 (318)
T ss_dssp TCBCEEECTTS-EEEEEE----------TTEEEEEETTTCCEEEEEECCS--TTCCEEEEEECTTSSEEEEEE-------
T ss_pred cceEEEECCCC-EEEEEe----------CCEEEEEECCCCCEEEEEEecC--CCCeEEEEEECCCCCEEEEEE-------
Confidence 34568999987 666532 4579999999998766543222 111267899999999998661
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCCCcccccccCCCCcEEEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILI 348 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~~~~~~~SpDG~~l~~ 348 (953)
..+.|.++++ +++..............++++++.++.
T Consensus 87 ------------------------------------------~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s 124 (318)
T 4ggc_A 87 ------------------------------------------SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSS 124 (318)
T ss_dssp ------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred ------------------------------------------CCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEE
Confidence 2245667788 675433322212223456778888777
Q ss_pred EEecCCccccccCCCCCcceEEEeccCce--EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~~~d~~g~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
.+.+ +.+.+|+..... ...+..+. .......|+++|+.++..
T Consensus 125 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~s~---------- 168 (318)
T 4ggc_A 125 GSRS-------------GHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRHLASG---------- 168 (318)
T ss_dssp EETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE----------
T ss_pred EecC-------------CceEeeecCCCceeEEEEcCcc-------------CceEEEEEcCCCCEEEEE----------
Confidence 6633 266677665332 22222221 233567899999876554
Q ss_pred cccccCCeEEEEecCCCCCCC----ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~----~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 502 (953)
+..+.+.+||+ .++.. ..........+..+.|+|++..++........ ..+.+.+.... ....... .
T Consensus 169 ---~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~i~lwd~~~~--~~~~~~~-~ 239 (318)
T 4ggc_A 169 ---GNDNLVNVWPS--APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD-RHIRIWNVCSG--ACLSAVD-A 239 (318)
T ss_dssp ---ETTSCEEEEES--SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT-CEEEEEETTTC--CEEEEEE-C
T ss_pred ---ecCcceeEEEC--CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC-CEEEEEecccc--ccccccc-c
Confidence 34567888986 22221 12223334556678899998877654432221 24555565553 2222221 1
Q ss_pred CccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEee
Q 002209 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (953)
Q Consensus 503 ~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~ 582 (953)
...+.. ..|+|+++.++...... ...|++||+.+++......+... .+..
T Consensus 240 ~~~v~~------~~~~~~~~~~~~~sg~~-------------------d~~i~iwd~~~~~~~~~l~gH~~----~V~~- 289 (318)
T 4ggc_A 240 HSQVCS------ILWSPHYKELISGHGFA-------------------QNQLVIWKYPTMAKVAELKGHTS----RVLS- 289 (318)
T ss_dssp SSCEEE------EEEETTTTEEEEEECTT-------------------TCCEEEEETTTCCEEEEECCCSS----CEEE-
T ss_pred eeeeee------eeecccccceEEEEEcC-------------------CCEEEEEECCCCcEEEEEcCCCC----CEEE-
Confidence 111221 67899998887654211 12499999998877655443221 1222
Q ss_pred ccCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002209 583 MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (953)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 618 (953)
.+|+|||+.|+- .+.. ..|.+|++..
T Consensus 290 ------l~~spdg~~l~S-~s~D---~~v~iWd~~~ 315 (318)
T 4ggc_A 290 ------LTMSPDGATVAS-AAAD---ETLRLWRCFE 315 (318)
T ss_dssp ------EEECTTSSCEEE-EETT---TEEEEECCSC
T ss_pred ------EEEcCCCCEEEE-EecC---CeEEEEECCC
Confidence 368999987663 3322 3577877644
No 361
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.18 E-value=1.4e-09 Score=119.79 Aligned_cols=266 Identities=11% Similarity=0.070 Sum_probs=150.4
Q ss_pred CcccceEeccC---CCeEEEEEeeccccCCCCcceEEEEECCC-Ccee--ecccCCCccccccccceEEecCCeEEEEEe
Q 002209 189 AKLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKAR--PLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (953)
Q Consensus 189 ~~~~~~~wSPD---G~~laf~~~~~~~~~~~~~~~l~~~d~~~-g~~~--~lt~~~~~~~~~~~~~~~wspDg~~l~~~~ 262 (953)
..+...+|+|| |+.|+... ....|.++++++ +... .+..+.. . +..++|+|||+.|+...
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~h~~-~----v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGS---------WANDVRCWEVQDSGQTIPKAQQMHTG-P----VLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEE---------TTSEEEEEEECTTSCEEEEEEEECSS-C----EEEEEECTTSSEEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEEC---------CCCcEEEEEcCCCCceeEEEeccccC-C----EEEEEECcCCCEEEEEc
Confidence 47899999999 58877754 245677777775 4432 2322222 2 77899999999998661
Q ss_pred cCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-Cccccccc-
Q 002209 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDP- 339 (953)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~- 339 (953)
..+.|.++++ +++...+... ..+..+.|
T Consensus 106 -------------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 106 -------------------------------------------------CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWI 136 (368)
T ss_dssp -------------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEEEEEEE
T ss_pred -------------------------------------------------CCCcEEEEEcCCCCceeeccccCceEEEEEE
Confidence 2246778888 7766555444 77888999
Q ss_pred -CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEE
Q 002209 340 -SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (953)
Q Consensus 340 -SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~ 417 (953)
+|||+.|+..+.+. .|.+||+..+.. ..+.... ....+.+. +..++..
T Consensus 137 ~~~~~~~l~~~~~dg-------------~i~vwd~~~~~~~~~~~~~~--------------~~~~~~~~--~~~~~~~- 186 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDK-------------TLKFWDTRSSNPMMVLQLPE--------------RCYCADVI--YPMAVVA- 186 (368)
T ss_dssp ECSSCEEEEEEETTS-------------EEEEECSSCSSCSEEEECSS--------------CEEEEEEE--TTEEEEE-
T ss_pred eCCCCCEEEEccCCC-------------cEEEEECCCCcEEEEEecCC--------------CceEEEec--CCeeEEE-
Confidence 99999998887443 899999975432 2222211 11123333 3333332
Q ss_pred EeccCCCcccccccCCeEEEEecCCCCCCCceE--Eee-cccccCCeeeccCCce----EEEEEecccCceEEEEEcCCC
Q 002209 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI--LHK-LDLRYGGISWCDDSLA----LVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~--l~~-~~~~~~~~~~SpDg~~----l~~~~~~~~~~~~l~~~d~~~ 490 (953)
...+.+.++++ ....... +.. .......+.+.+++.. ++....++ .+.+++...
T Consensus 187 ------------~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg----~i~i~~~~~ 247 (368)
T 3mmy_A 187 ------------TAERGLIVYQL---ENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG----RVAIHYINP 247 (368)
T ss_dssp ------------EGGGCEEEEEC---SSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS----EEEEEESSC
T ss_pred ------------eCCCcEEEEEe---ccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC----cEEEEecCC
Confidence 23446777775 2222111 111 1122233444444433 55554332 344444444
Q ss_pred CCC-CcEEeecCCCc------------cccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEE
Q 002209 491 KDV-APRILFDRSSE------------DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (953)
Q Consensus 491 ~~~-~~~~~~~~~~~------------~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 557 (953)
... ........... .+.. +.|+|||++|+....+. .|++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~sp~~~~l~s~~~dg---------------------~i~iw 300 (368)
T 3mmy_A 248 PNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG------IAFHPVHGTLATVGSDG---------------------RFSFW 300 (368)
T ss_dssp SCHHHHSEEEECSEEC----CCCEEECCEEE------EEECTTTCCEEEEETTS---------------------CEEEE
T ss_pred CCccccceeeeeeecccccccccccccceEE------EEEecCCCEEEEEccCC---------------------eEEEE
Confidence 211 11111111111 1222 78999999988776322 39999
Q ss_pred ECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEec
Q 002209 558 DINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKES 604 (953)
Q Consensus 558 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 604 (953)
|+.+++.......... .+. ..+|+|||+.++.....
T Consensus 301 d~~~~~~~~~~~~~~~----~v~-------~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 301 DKDARTKLKTSEQLDQ----PIS-------ACCFNHNGNIFAYASSY 336 (368)
T ss_dssp ETTTTEEEEECCCCSS----CEE-------EEEECTTSSCEEEEECC
T ss_pred ECCCCcEEEEecCCCC----Cce-------EEEECCCCCeEEEEecc
Confidence 9998876554443221 112 24789999987776554
No 362
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.17 E-value=4.2e-10 Score=121.62 Aligned_cols=174 Identities=14% Similarity=0.036 Sum_probs=109.5
Q ss_pred HcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCcccE
Q 002209 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFCC 786 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~a 786 (953)
+.||.|+.+ +..|+|.+..........+.|+.+.++.+.. ..++.|+||||||.++..++.+. |+.+++
T Consensus 107 ~~~~~v~~~---d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~ 178 (319)
T 3lcr_A 107 DAGRRVSAL---VPPGFHGGQALPATLTVLVRSLADVVQAEVA-----DGEFALAGHSSGGVVAYEVARELEARGLAPRG 178 (319)
T ss_dssp CTTSEEEEE---ECTTSSTTCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCceEEEe---eCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHhcCCCccE
Confidence 789999994 4467776544434456666776666655432 25899999999999999999887 788999
Q ss_pred EEEcccCCCCCCC-Cc-Cccc-ccchhh----------------hhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCc
Q 002209 787 GIARSGAYNRTLT-PF-GFQN-EDRTLW----------------EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTL 847 (953)
Q Consensus 787 ~v~~~~~~d~~~~-~~-~~~~-~~~~~~----------------~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~ 847 (953)
+|++++....... .. .+.. ...... .....+...-.......+++|+|+++|++ ..++
T Consensus 179 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~-- 255 (319)
T 3lcr_A 179 VVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVE-- 255 (319)
T ss_dssp EEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSS--
T ss_pred EEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCC--
Confidence 9988765322110 00 0000 000000 00001111111112257889999999998 4555
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc-ccHHHHHHHHHHHHHHhc
Q 002209 848 TMQSDRFFNALKGHGALCRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 848 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l 898 (953)
+.....+.+.+... .+++++++ +|..... +....+.+.|.+||.+..
T Consensus 256 ~~~~~~~~~~~~~~---~~~~~~~g-~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 256 QEKPEWRGDVLAAM---GQVVEAPG-DHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp CCCTHHHHHHHHTC---SEEEEESS-CTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhcCCCC---ceEEEeCC-CcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 56667777766543 57888887 6654333 578899999999999864
No 363
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=1.4e-08 Score=117.96 Aligned_cols=298 Identities=13% Similarity=0.031 Sum_probs=156.0
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEec----cCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCC
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWS----QDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD 239 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wS----PDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~ 239 (953)
.|.++|+.. .+.....++ +.+.......+| |||++++.... ....+.++|..+.+..+......
T Consensus 219 ~V~viD~~~-~t~~~v~~i---~~G~~P~~ia~s~~~~pDGk~l~v~n~--------~~~~v~ViD~~t~~~~~~i~~~~ 286 (567)
T 1qks_A 219 KVNMIDLWM-KEPTTVAEI---KIGSEARSIETSKMEGWEDKYAIAGAY--------WPPQYVIMDGETLEPKKIQSTRG 286 (567)
T ss_dssp EEEEEETTS-SSCCEEEEE---ECCSEEEEEEECCSTTCTTTEEEEEEE--------ETTEEEEEETTTCCEEEEEECCE
T ss_pred eEEEEECCC-CCCcEeEEE---ecCCCCceeEEccccCCCCCEEEEEEc--------cCCeEEEEECCCCcEEEEEeccc
Confidence 578888731 111222233 334456788999 79999887654 24678888988877655432211
Q ss_pred ccc-------cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhc
Q 002209 240 IYL-------NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYA 312 (953)
Q Consensus 240 ~~~-------~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 312 (953)
... ...+..+..|+++..+++.. ..
T Consensus 287 ~~~~~~~~~p~~rva~i~~s~~~~~~vv~~------------------------------------------------~~ 318 (567)
T 1qks_A 287 MTYDEQEYHPEPRVAAILASHYRPEFIVNV------------------------------------------------KE 318 (567)
T ss_dssp ECTTTCCEESCCCEEEEEECSSSSEEEEEE------------------------------------------------TT
T ss_pred cccccccccCCCceEEEEEcCCCCEEEEEe------------------------------------------------cC
Confidence 000 00133455666666555441 03
Q ss_pred cceEEEEEc-CCc---eeEeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcc
Q 002209 313 TTQLVLVSL-DGT---VKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE 388 (953)
Q Consensus 313 ~~~l~~~~~-~g~---~~~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~ 388 (953)
.++|+++|. +.+ ...+..........|+|||++++.+... .+.|.++|+.+++.........
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~------------sn~V~ViD~~t~kl~~~i~vgg-- 384 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA------------RNKLVVIDTKEGKLVAIEDTGG-- 384 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECSS--
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC------------CCeEEEEECCCCcEEEEEeccC--
Confidence 467888887 432 2233222344567899999999887743 2379999998766543322100
Q ss_pred cCCccccccccCccceee-ccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCC----CCc-eEEeecccccCCee
Q 002209 389 DIPIAFNSVRKGMRSINW-RSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG----EGP-EILHKLDLRYGGIS 462 (953)
Q Consensus 389 ~~p~~~~~~~~~~~~~~w-spDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g----~~~-~~l~~~~~~~~~~~ 462 (953)
..|. .+ +.+.| +||+..+++. .. -+.+.|.+++.++... -+. +.+.........+.
T Consensus 385 ~~Ph------pg-~g~~~~~p~~g~v~~t-~~----------~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~ 446 (567)
T 1qks_A 385 QTPH------PG-RGANFVHPTFGPVWAT-SH----------MGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIK 446 (567)
T ss_dssp SSBC------CT-TCEEEEETTTEEEEEE-EB----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred cCCC------Cc-cceeeECCCCCcEEEe-CC----------CCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEE
Confidence 1111 00 23444 7886655333 11 1235788888622110 111 22222111123367
Q ss_pred eccCCceEEEEEeccc---CceEEEEEcCCCC-----CCCcEEeecCCCcccc-CCCCCCCeEeccCCCEEEEEeeeccC
Q 002209 463 WCDDSLALVYESWYKT---RRTRTWVISPGSK-----DVAPRILFDRSSEDVY-SDPGSPMMRRTSTGTYVIAKIKKEND 533 (953)
Q Consensus 463 ~SpDg~~l~~~~~~~~---~~~~l~~~d~~~~-----~~~~~~~~~~~~~~~~-~~~~~p~~~~SpDG~~l~~~~~~~~~ 533 (953)
.+|||++|+.....+. ....+.++|.++. ......+.-.....+- +...-..+.|+|||+++++......
T Consensus 447 ~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~- 525 (567)
T 1qks_A 447 THPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGK- 525 (567)
T ss_dssp CCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCT-
T ss_pred eCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCC-
Confidence 8999999887642111 1236777877653 1111222110000000 0000011679999999998864210
Q ss_pred CCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEec
Q 002209 534 EGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~ 569 (953)
.....|.++|.++++......
T Consensus 526 ---------------~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 526 ---------------DQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp ---------------TSCCEEEEEETTTTEEEEEEC
T ss_pred ---------------CCCCcEEEEECCCceEEEEeC
Confidence 012348899999988765544
No 364
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.17 E-value=1.6e-09 Score=122.89 Aligned_cols=242 Identities=11% Similarity=0.217 Sum_probs=144.0
Q ss_pred CCCCCCceecCCC-CEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCC-------CCCCce
Q 002209 108 APPLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPD-------GKLGQE 179 (953)
Q Consensus 108 ~~~~~~~~~SPDG-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~-------g~~~~~ 179 (953)
...+..++|+|++ +.||....+ +.|.||++... +.....
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~d---------------------------------g~V~vwd~~~~~~~~~~~~~~~~~ 174 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPS---------------------------------SDVLVFDYTKHPSKPEPSGECQPD 174 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSS---------------------------------SCEEEEEGGGSCSSCCTTCCCCCS
T ss_pred CCcEEEEEECCCCCcEEEEECCC---------------------------------CcEEEEECCCcccccCccccCCCc
Confidence 4468889999984 555554433 36789998541 111223
Q ss_pred eeeecCCCCCcccceEeccCCC-eEEEEEeeccccCCCCcceEEEEECCCCce--------eecccCCCccccccccceE
Q 002209 180 IEIQGFPDGAKLNFVTWSQDGK-HLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFV 250 (953)
Q Consensus 180 ~~l~~~~~~~~~~~~~wSPDG~-~laf~~~~~~~~~~~~~~~l~~~d~~~g~~--------~~lt~~~~~~~~~~~~~~~ 250 (953)
..+.. +...+....|+|+++ .|+... ....|.++++..+.. ..+..+. ..+..++
T Consensus 175 ~~~~~--h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~-----~~v~~v~ 238 (430)
T 2xyi_A 175 LRLRG--HQKEGYGLSWNPNLNGYLLSAS---------DDHTICLWDINATPKEHRVIDAKNIFTGHT-----AVVEDVA 238 (430)
T ss_dssp EEEEC--CSSCCCCEEECTTSTTEEEEEC---------TTSCEEEEETTSCCBGGGEEECSEEECCCS-----SCEEEEE
T ss_pred EEecC--CCCCeEEEEeCCCCCCeEEEEe---------CCCeEEEEeCCCCCCCCceeccceeecCCC-----CCEeeeE
Confidence 33333 234689999999999 555532 355788888876321 1121211 2277899
Q ss_pred EecC-CeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC----c
Q 002209 251 WVNN-STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG----T 324 (953)
Q Consensus 251 wspD-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g----~ 324 (953)
|+|+ +..|+... ..+.|.++|+ ++ .
T Consensus 239 ~~p~~~~~l~s~~-------------------------------------------------~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 239 WHLLHESLFGSVA-------------------------------------------------DDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp ECSSCTTEEEEEE-------------------------------------------------TTSEEEEEETTCSCSSSC
T ss_pred EeCCCCCEEEEEe-------------------------------------------------CCCeEEEEECCCCCCCcc
Confidence 9995 55555441 2356778888 54 2
Q ss_pred eeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC-ce-EEEeccCCCcccCCccccccccCc
Q 002209 325 VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IF-VRELCDLPLAEDIPIAFNSVRKGM 401 (953)
Q Consensus 325 ~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g-~~-~~~l~~~~~~~~~p~~~~~~~~~~ 401 (953)
...+... ..+..++|+|+|++++++... .+.|.+||+.. +. ...+..+ ...+
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~------------dg~v~vwd~~~~~~~~~~~~~h-------------~~~v 324 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSA------------DKTVALWDLRNLKLKLHSFESH-------------KDEI 324 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEET------------TSEEEEEETTCTTSCSEEEECC-------------SSCE
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeC------------CCeEEEEeCCCCCCCeEEeecC-------------CCCE
Confidence 3333333 678899999999976555422 24899999974 22 2333222 1345
Q ss_pred cceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCC-----------ceEE---eecccccCCeeeccCC
Q 002209 402 RSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-----------PEIL---HKLDLRYGGISWCDDS 467 (953)
Q Consensus 402 ~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~-----------~~~l---~~~~~~~~~~~~SpDg 467 (953)
..++|+|+|+.+++.. +..+.|.+|++ ...+. ...+ ..+...+..+.|+|++
T Consensus 325 ~~i~~sp~~~~~l~s~------------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 390 (430)
T 2xyi_A 325 FQVQWSPHNETILASS------------GTDRRLHVWDL--SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 390 (430)
T ss_dssp EEEEECSSCTTEEEEE------------ETTSCCEEEEG--GGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSS
T ss_pred EEEEECCCCCCEEEEE------------eCCCcEEEEeC--CCCccccCccccccCCcceEEEcCCCCCCceEEEECCCC
Confidence 6899999998765541 23457888886 11111 1222 2334557789999999
Q ss_pred ceEEEEEecccCceEEEEEc
Q 002209 468 LALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 468 ~~l~~~~~~~~~~~~l~~~d 487 (953)
++++++...+ +..++|.++
T Consensus 391 ~~~l~s~s~d-g~i~iw~~~ 409 (430)
T 2xyi_A 391 PWIICSVSED-NIMQVWQMA 409 (430)
T ss_dssp TTEEEEEETT-SEEEEEEEC
T ss_pred CCEEEEEECC-CCEEEeEcc
Confidence 9555544433 223566654
No 365
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.16 E-value=1.3e-10 Score=124.77 Aligned_cols=200 Identities=20% Similarity=0.116 Sum_probs=114.1
Q ss_pred CccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHH
Q 002209 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (953)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~ 748 (953)
..|.||++||..... ++..| ...... ...+|.|+. ++..|+|.+..........+.|+.+.
T Consensus 66 ~~~~lvllhG~~~~~---------~~~~~----~~~~~~-l~~~~~v~~---~d~~G~G~s~~~~~~~~~~a~~~~~~-- 126 (300)
T 1kez_A 66 GEVTVICCAGTAAIS---------GPHEF----TRLAGA-LRGIAPVRA---VPQPGYEEGEPLPSSMAAVAAVQADA-- 126 (300)
T ss_dssp CSSEEEECCCSSTTC---------STTTT----HHHHHH-TSSSCCBCC---CCCTTSSTTCCBCSSHHHHHHHHHHH--
T ss_pred CCCeEEEECCCcccC---------cHHHH----HHHHHh-cCCCceEEE---ecCCCCCCCCCCCCCHHHHHHHHHHH--
Confidence 368899999953210 00111 112222 345799998 55567777644333345555555433
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CcccEEEEcccCCCCCCCC----------cCcccc----cchhh
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGAYNRTLTP----------FGFQNE----DRTLW 811 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~~d~~~~~----------~~~~~~----~~~~~ 811 (953)
+.+. .+..++.|+||||||.+++.++.++| ++++++|++++........ ..+... .....
T Consensus 127 -l~~~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (300)
T 1kez_A 127 -VIRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRL 203 (300)
T ss_dssp -HHHH--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHH
T ss_pred -HHHh--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHH
Confidence 3322 23468999999999999999999987 4899999988754321100 000000 00000
Q ss_pred hhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHH
Q 002209 812 EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETD 891 (953)
Q Consensus 812 ~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 891 (953)
.....+...-......++++|+|+++|+ |..++ +.. ..+.+ .....++++++++ +|.....+....+.+.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~--~~~-~~~~~---~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~ 275 (300)
T 1kez_A 204 TALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGP--WPD-DSWKP---TWPFEHDTVAVPG-DHFTMVQEHADAIARHID 275 (300)
T ss_dssp HHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSC--CCS-SCCSC---CCSSCCEEEEESS-CTTTSSSSCSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCC--Ccc-cchhh---hcCCCCeEEEecC-CChhhccccHHHHHHHHH
Confidence 0111121111111246789999999995 66665 433 22211 1122468999999 998753366677888888
Q ss_pred HHHHHhc
Q 002209 892 RWLQKYC 898 (953)
Q Consensus 892 ~fl~~~l 898 (953)
+||.+..
T Consensus 276 ~fl~~~~ 282 (300)
T 1kez_A 276 AWLGGGN 282 (300)
T ss_dssp HHHTCC-
T ss_pred HHHHhcc
Confidence 8887643
No 366
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=3.7e-09 Score=113.10 Aligned_cols=252 Identities=11% Similarity=0.038 Sum_probs=149.8
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCc
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~ 190 (953)
...+.|+|||+.|+++... . +.|++|+..+ + .+.+.. + ...
T Consensus 30 ~eg~~~d~~g~~l~~~~~~--------------------------~------~~i~~~~~~~----~-~~~~~~-~-~~~ 70 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVR--------------------------Q------NRTWAWSDDG----Q-LSPEMH-P-SHH 70 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGG--------------------------G------TEEEEEETTS----C-EEEEES-S-CSS
T ss_pred ccCCeEeCCCCEEEEEeCC--------------------------C------CEEEEEECCC----C-eEEEEC-C-CCC
Confidence 3478999999977776652 0 2578888732 3 334432 2 235
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
+..+.++|||+.++.. .+...|++++.++|+.+.+...........+..++++|||++++.. ......
T Consensus 71 ~~~l~~~~dg~l~v~~---------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd-~~~g~~-- 138 (296)
T 3e5z_A 71 QNGHCLNKQGHLIACS---------HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSD-PTYGID-- 138 (296)
T ss_dssp EEEEEECTTCCEEEEE---------TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEE-CSHHHH--
T ss_pred cceeeECCCCcEEEEe---------cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEEC-Cccccc--
Confidence 6778999999854442 1246899999988877665432111101114578899999855432 000000
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCC-CcccccccCCCCcEEEEE
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILIS 349 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDG~~l~~~ 349 (953)
. . ........+ .....||+++.+|+.+.+... .....++|||||+.| ++
T Consensus 139 --------------~--------~-~~~~~~~~~------~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~l-v~ 188 (296)
T 3e5z_A 139 --------------K--------P-EEGYGGEME------LPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLL-VS 188 (296)
T ss_dssp --------------C--------G-GGSSCCCCC------SSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEE-EE
T ss_pred --------------c--------c-ccccccccc------CCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEE-EE
Confidence 0 0 000000000 023578888877766666554 556789999999998 55
Q ss_pred EecCCccccccCCCCCcceEEEecc-CceE---EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 350 SIHRPYSFIVPCGRFPRQVGVWTTD-GIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~~~d~~-g~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
... ...|++|+++ .+.. ..+... . ...+..+++++||+ |+..
T Consensus 189 ~~~------------~~~i~~~~~~~~g~~~~~~~~~~~--~----------~~~p~~i~~d~~G~-l~v~--------- 234 (296)
T 3e5z_A 189 DTG------------DNATHRYCLNARGETEYQGVHFTV--E----------PGKTDGLRVDAGGL-IWAS--------- 234 (296)
T ss_dssp ETT------------TTEEEEEEECSSSCEEEEEEEECC--S----------SSCCCSEEEBTTSC-EEEE---------
T ss_pred eCC------------CCeEEEEEECCCCcCcCCCeEeeC--C----------CCCCCeEEECCCCC-EEEE---------
Confidence 422 2489999986 3333 222111 1 12345789999996 3333
Q ss_pred ccccccCCeEEEEecCCCCCCCceEEeecccccCCeee-ccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISW-CDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~-SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
. .+.|++++. +|.....+..... ...++| +||++.|+.+... .||.+++.+.
T Consensus 235 ----~-~~~v~~~~~---~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~~~~ 287 (296)
T 3e5z_A 235 ----A-GDGVHVLTP---DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIETNVR 287 (296)
T ss_dssp ----E-TTEEEEECT---TSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEECSCC
T ss_pred ----c-CCeEEEECC---CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEcccc
Confidence 1 357889984 5544444554444 777889 5899998887532 6999998774
No 367
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.15 E-value=1.2e-08 Score=115.74 Aligned_cols=197 Identities=10% Similarity=0.047 Sum_probs=119.1
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCC----------Cce-eecccCCCccccccccceEEecCCe-
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT----------GKA-RPLFQSPDIYLNAIFDNFVWVNNST- 256 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~----------g~~-~~lt~~~~~~~~~~~~~~~wspDg~- 256 (953)
..+...+|+|++..++++.. ....|+++++.. .+. ..+..+.. .+..++|+|+++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~--------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKT--------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-----EGYGLSWNPNLNG 195 (430)
T ss_dssp SCCSEEEEETTEEEEEEEEC--------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-----CCCCEEECTTSTT
T ss_pred CcEEEEEECCCCCcEEEEEC--------CCCcEEEEECCCcccccCccccCCCcEEecCCCC-----CeEEEEeCCCCCC
Confidence 46899999998555555432 244677777764 121 22222222 266899999998
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-c-------eeE
Q 002209 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-T-------VKE 327 (953)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-~-------~~~ 327 (953)
.|+... ..+.|.++++ ++ . ...
T Consensus 196 ~l~s~~-------------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~ 226 (430)
T 2xyi_A 196 YLLSAS-------------------------------------------------DDHTICLWDINATPKEHRVIDAKNI 226 (430)
T ss_dssp EEEEEC-------------------------------------------------TTSCEEEEETTSCCBGGGEEECSEE
T ss_pred eEEEEe-------------------------------------------------CCCeEEEEeCCCCCCCCceecccee
Confidence 776551 2245666776 42 1 222
Q ss_pred eCCC-CcccccccCCCC-cEEEEEEecCCccccccCCCCCcceEEEeccCce----EEEeccCCCcccCCccccccccCc
Q 002209 328 IGPP-AVYTSLDPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGM 401 (953)
Q Consensus 328 l~~~-~~~~~~~~SpDG-~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~----~~~l~~~~~~~~~p~~~~~~~~~~ 401 (953)
+... ..+..++|+|++ ..++....+ +.|.+||+..+. ...+.. ....+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~d-------------g~i~i~d~~~~~~~~~~~~~~~-------------~~~~v 280 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADD-------------QKLMIWDTRNNNTSKPSHTVDA-------------HTAEV 280 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETT-------------SEEEEEETTCSCSSSCSEEEEC-------------CSSCE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCC-------------CeEEEEECCCCCCCcceeEeec-------------CCCCe
Confidence 3333 678889999954 444444422 389999998542 222211 12345
Q ss_pred cceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCC-CCCceEEeecccccCCeeeccCCceEEEEEecccCc
Q 002209 402 RSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (953)
Q Consensus 402 ~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 480 (953)
..++|+|+++.+++.. +..+.|.+||+ .. +.....+..+...+..+.|+|+++.++++...++ .
T Consensus 281 ~~i~~~p~~~~~l~tg------------~~dg~v~vwd~--~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~-~ 345 (430)
T 2xyi_A 281 NCLSFNPYSEFILATG------------SADKTVALWDL--RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-R 345 (430)
T ss_dssp EEEEECSSCTTEEEEE------------ETTSEEEEEET--TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-C
T ss_pred EEEEeCCCCCCEEEEE------------eCCCeEEEEeC--CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC-c
Confidence 7899999998765541 33557999997 22 2234455566777888999999987665554432 2
Q ss_pred eEEEEEcC
Q 002209 481 TRTWVISP 488 (953)
Q Consensus 481 ~~l~~~d~ 488 (953)
..+|.+..
T Consensus 346 i~iwd~~~ 353 (430)
T 2xyi_A 346 LHVWDLSK 353 (430)
T ss_dssp CEEEEGGG
T ss_pred EEEEeCCC
Confidence 35665544
No 368
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.15 E-value=3.1e-08 Score=112.70 Aligned_cols=314 Identities=11% Similarity=0.024 Sum_probs=176.7
Q ss_pred eecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCcccce
Q 002209 115 SFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFV 194 (953)
Q Consensus 115 ~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~ 194 (953)
.+++||++|+..+.+ +.|.+||+.+ + .....+.++ ...+...
T Consensus 124 ~~~~~g~~l~sg~~d---------------------------------g~i~vwd~~~-~--~~~~~~~~h--~~~v~~~ 165 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDD---------------------------------NTLKVWSAVT-G--KCLRTLVGH--TGGVWSS 165 (445)
T ss_dssp EEEEETTEEEEEETT---------------------------------SCEEEEETTT-C--CEEEECCCC--SSCEEEE
T ss_pred EEEEcCCEEEEEECC---------------------------------CcEEEEECCC-C--cEEEEEcCC--CCCEEEE
Confidence 578889998888765 3689999853 2 222333322 2367778
Q ss_pred EeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002209 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (953)
Q Consensus 195 ~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 274 (953)
.|+ ++.|+... .+..|.++|+++++........... +..+.|+ ++.|+...
T Consensus 166 ~~~--~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~--~~~l~s~s------------ 216 (445)
T 2ovr_B 166 QMR--DNIIISGS---------TDRTLKVWNAETGECIHTLYGHTST----VRCMHLH--EKRVVSGS------------ 216 (445)
T ss_dssp EEE--TTEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEEE--TTEEEEEE------------
T ss_pred Eec--CCEEEEEe---------CCCeEEEEECCcCcEEEEECCCCCc----EEEEEec--CCEEEEEe------------
Confidence 887 55666644 2567888999888765443323222 5566674 45566541
Q ss_pred CCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-CcccccccCCCCcEEEEEEe
Q 002209 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYILISSI 351 (953)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDG~~l~~~~~ 351 (953)
..+.|.++|+ +++.. .+... ..+..+.| ||+.|+..+.
T Consensus 217 -------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 217 -------------------------------------RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp -------------------------------------TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred -------------------------------------CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 2356778888 66433 33333 56666666 8898888774
Q ss_pred cCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccc
Q 002209 352 HRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (953)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~ 430 (953)
+ +.|.+||+..+.. ..+..+. ..+..+.| ||+.++.. +
T Consensus 258 d-------------g~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~~-------------~ 296 (445)
T 2ovr_B 258 D-------------FMVKVWDPETETCLHTLQGHT-------------NRVYSLQF--DGIHVVSG-------------S 296 (445)
T ss_dssp T-------------SCEEEEEGGGTEEEEEECCCS-------------SCEEEEEE--CSSEEEEE-------------E
T ss_pred C-------------CEEEEEECCCCcEeEEecCCC-------------CceEEEEE--CCCEEEEE-------------e
Confidence 4 3899999985543 3333221 22345666 77765554 4
Q ss_pred cCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCC
Q 002209 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (953)
Q Consensus 431 ~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 510 (953)
..+.+.+||+ .++.....+..+...+. .++++++.|+....++ .+.++|+.++ +...........
T Consensus 297 ~d~~i~i~d~--~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~dg----~i~vwd~~~~--~~~~~~~~~~~~----- 361 (445)
T 2ovr_B 297 LDTSIRVWDV--ETGNCIHTLTGHQSLTS--GMELKDNILVSGNADS----TVKIWDIKTG--QCLQTLQGPNKH----- 361 (445)
T ss_dssp TTSCEEEEET--TTCCEEEEECCCCSCEE--EEEEETTEEEEEETTS----CEEEEETTTC--CEEEEECSTTSC-----
T ss_pred CCCeEEEEEC--CCCCEEEEEcCCcccEE--EEEEeCCEEEEEeCCC----eEEEEECCCC--cEEEEEccCCCC-----
Confidence 4567899996 23322233333333333 3455677777665443 4566666654 222222221100
Q ss_pred CCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEec-cCcccceeeeEeeccCCccc
Q 002209 511 GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE-SDKEKYYETTVALMSDQTEG 589 (953)
Q Consensus 511 ~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 589 (953)
..+...+..++++|+....+ ..|.+||+.+++...... ......-..+. ..
T Consensus 362 ~~~v~~~~~~~~~l~s~~~d---------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~-------~~ 413 (445)
T 2ovr_B 362 QSAVTCLQFNKNFVITSSDD---------------------GTVKLWDLKTGEFIRNLVTLESGGSGGVVW-------RI 413 (445)
T ss_dssp SSCEEEEEECSSEEEEEETT---------------------SEEEEEETTTCCEEEEEEECTTGGGTCEEE-------EE
T ss_pred CCCEEEEEECCCEEEEEeCC---------------------CeEEEEECCCCceeeeeeccccCCCCceEE-------EE
Confidence 11112334456776666522 249999999887655431 11000000111 24
Q ss_pred cccccCCEEEEEEecCCCCceEEEEECCC
Q 002209 590 DLYLNQLKILTSKESKTENTQYYIQSWPD 618 (953)
Q Consensus 590 ~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 618 (953)
+|+|++..++...........++++|...
T Consensus 414 ~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 414 RASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 68888876666555555466788888643
No 369
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.14 E-value=5.8e-10 Score=116.25 Aligned_cols=154 Identities=15% Similarity=0.082 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----cccEEEEcccCCCCCCCC-----cCcc
Q 002209 735 FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-----LFCCGIARSGAYNRTLTP-----FGFQ 804 (953)
Q Consensus 735 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~~~~d~~~~~-----~~~~ 804 (953)
......+|+.++++.+.+...+ +++.++||||||.+++.++.++|+ +++++|++++.++..... +.+.
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~ 149 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFK 149 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCS
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccc
Confidence 3567788888888888776433 689999999999999999999988 899999999876633210 0000
Q ss_pred cccchhhhhHHHHHhcCcccccCCCCCcEEEEEeC------CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC--CCcc
Q 002209 805 NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGE------EDNNSGTLTMQSDRFFNALKGHGALCRLVILPF--ESHG 876 (953)
Q Consensus 805 ~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~ 876 (953)
... ........+... ...+.+ +.|+|.++|+ .|.+|| ...++.+...++.....++.+.+.+ ++|.
T Consensus 150 ~~p-~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp--~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs 223 (254)
T 3ds8_A 150 KLP-NSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVP--TISSLATRLFMPGSAKAYIEDIQVGEDAVHQ 223 (254)
T ss_dssp SCS-SCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSB--HHHHTGGGGTSBTTBSEEEEEEEESGGGCGG
T ss_pred cCC-cchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEee--HHHHHHHHHHhhccCcceEEEEEeCCCCchh
Confidence 000 001111111111 111222 6899999999 999999 8888887777765545566666766 6687
Q ss_pred CCCcccHHHHHHHHHHHHHHhc
Q 002209 877 YAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl~~~l 898 (953)
.. .++ .++.+.+..||.++.
T Consensus 224 ~l-~~~-~~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 224 TL-HET-PKSIEKTYWFLEKFK 243 (254)
T ss_dssp GG-GGS-HHHHHHHHHHHHTCC
T ss_pred cc-cCC-HHHHHHHHHHHHHhc
Confidence 64 233 358888999998864
No 370
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.13 E-value=8.1e-10 Score=113.71 Aligned_cols=152 Identities=14% Similarity=0.126 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----cccEEEEcccCCCCCCC---CcC--cccc
Q 002209 737 EQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-----LFCCGIARSGAYNRTLT---PFG--FQNE 806 (953)
Q Consensus 737 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~~~~d~~~~---~~~--~~~~ 806 (953)
....+++.++++++.+...+ +++.++||||||.+++.++.++|. +++.+|++++.++.... ... ....
T Consensus 77 ~~~~~~l~~~i~~l~~~~~~--~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~ 154 (249)
T 3fle_A 77 KENAYWIKEVLSQLKSQFGI--QQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDK 154 (249)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--CEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCT
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcc
Confidence 45677888888888776533 589999999999999999998863 79999999887654211 000 0001
Q ss_pred cchhhhhHHHHHhcC-cccccCCCCCcEEEEEeC------CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCC--CCccC
Q 002209 807 DRTLWEATSTYVEMS-PFMSANKLKKPILLVHGE------EDNNSGTLTMQSDRFFNALKGHGALCRLVILPF--ESHGY 877 (953)
Q Consensus 807 ~~~~~~~~~~~~~~s-p~~~~~~i~~P~Li~~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~~ 877 (953)
.+.+......|...- ....+.+.++|+|.|+|+ .|.+|| ...++.+...++......+.+.+.| +.|..
T Consensus 155 ~g~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~--~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~ 232 (249)
T 3fle_A 155 QGKPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVS--NSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQ 232 (249)
T ss_dssp TCCBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSB--HHHHHTHHHHSTTCSSEEEEEEEESGGGSTGG
T ss_pred cCCCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCccc--HHHHHHHHHHHhhCCCceEEEEEeCCCCchhc
Confidence 111111112222221 112233456899999998 799999 8888888777777767777777766 78986
Q ss_pred CCcccHHHHHHHHHHHH
Q 002209 878 AARESIMHVLWETDRWL 894 (953)
Q Consensus 878 ~~~~~~~~~~~~i~~fl 894 (953)
.. + ...+.+.|.+||
T Consensus 233 l~-~-n~~V~~~I~~FL 247 (249)
T 3fle_A 233 LH-E-NKDVANEIIQFL 247 (249)
T ss_dssp GG-G-CHHHHHHHHHHH
T ss_pred cc-c-CHHHHHHHHHHh
Confidence 43 3 347788888886
No 371
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.13 E-value=6.8e-09 Score=115.11 Aligned_cols=134 Identities=7% Similarity=-0.014 Sum_probs=77.9
Q ss_pred ccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 336 ~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
.+.+++||+.++|.... +.+++.|..++..+.+..................+...++++|||++++.
T Consensus 269 ~~~~~~dg~~~~~~s~~-------------g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyV 335 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTYT-------------GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYL 335 (426)
T ss_dssp CCEECTTTCEEEEEBTT-------------SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEE
T ss_pred EeeecCCCCEEEEEeCC-------------CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEE
Confidence 45679999999998732 37999999766554433221110000000011123345789999997766
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
.......+ ......+.|.++|+ ...+. ..+.- .....++.|+|||+.++|..+...+ .|.++|+.++
T Consensus 336 a~~~~~~g---thk~~s~~VsVID~---~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~--~VsVID~~t~ 403 (426)
T 3c75_H 336 LVDQRDEW---KHKAASRFVVVLNA---ETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQ--TLHIYDAATG 403 (426)
T ss_dssp EEEECCTT---CTTSCEEEEEEEET---TTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTT--EEEEEETTTC
T ss_pred Eecccccc---cccCCCCEEEEEEC---CCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCC--eEEEEECCCC
Confidence 63321100 00012457999996 33333 33422 2246779999999966666664433 7999999886
No 372
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.13 E-value=1.4e-09 Score=132.67 Aligned_cols=232 Identities=12% Similarity=0.124 Sum_probs=140.4
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeec--ccCCCccccccccceEEecC--CeEEEEEecC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNN--STLLVCTIPL 264 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l--t~~~~~~~~~~~~~~~wspD--g~~l~~~~~~ 264 (953)
..+..+.|||||++|+.... ...|.++++.++....+ ..... ..+..+.|+|+ |+.|+.+.
T Consensus 10 ~~V~~l~~s~dg~~latg~~---------dg~I~vwd~~~~~~~~~~~l~~h~----~~V~~l~~s~~~~~~~l~s~s-- 74 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSS---------DKTIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCS-- 74 (753)
T ss_dssp CCEEEECCCSSSCCEEEEET---------TTEEEEEEEETTEEEEEEEECCCS----SCEEEEEECCTTSCSEEEEEE--
T ss_pred ceeEEEEECCCCCeEEEEEC---------CCcEEEEecCCCCCccceeccCCc----CceEEEEecCCCCCCEEEEEe--
Confidence 36888999999999888542 44666666654432222 22122 22778999988 88888661
Q ss_pred CCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc---eeEeCCC-Cccccccc
Q 002209 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDP 339 (953)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~ 339 (953)
..+.|.++++ +++ ...+... ..+..++|
T Consensus 75 -----------------------------------------------~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 75 -----------------------------------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 107 (753)
T ss_dssp -----------------------------------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred -----------------------------------------------CCCeEEEEECCCCcccccccccCCCCCeEEEEE
Confidence 2245667777 663 3334434 77889999
Q ss_pred CCC--CcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc---------
Q 002209 340 SPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS--------- 408 (953)
Q Consensus 340 SpD--G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp--------- 408 (953)
+|+ |+.++..+.++ .|.+||+..+........ ......+..+.|+|
T Consensus 108 sp~~~~~~l~sgs~dg-------------~I~vwdl~~~~~~~~~~~----------~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 108 APHEYGPLLLVASSDG-------------KVSVVEFKENGTTSPIII----------DAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp CCGGGCSEEEEEETTS-------------EEEEEECCSSSCCCCEEE----------ECCSSCEEEEEECCCC-------
T ss_pred CCCCCCCEEEEEeCCC-------------cEEEEEeecCCCcceeEe----------ecCCCceEEEEecCccccccccc
Confidence 999 99998887443 899999985421111110 01123456788999
Q ss_pred ----CCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc----eEEeecccccCCeeeccC---CceEEEEEecc
Q 002209 409 ----DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP----EILHKLDLRYGGISWCDD---SLALVYESWYK 477 (953)
Q Consensus 409 ----Dg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~----~~l~~~~~~~~~~~~SpD---g~~l~~~~~~~ 477 (953)
||+.++.. +..+.|.+||+ ..+... ..+..+...+..++|+|+ |+.|+..+.++
T Consensus 165 ~~~~d~~~l~sg-------------s~dg~I~iwd~--~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 165 NGTKESRKFVTG-------------GADNLVKIWKY--NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp --CGGGCCEEEE-------------ETTSCEEEEEE--ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred ccCCCCCEEEEE-------------ECCCeEEEEec--cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 57766655 44567888886 222222 123345666788999999 78887776544
Q ss_pred cCceEEEEEcCCCCCCCcEEee-cCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 478 TRRTRTWVISPGSKDVAPRILF-DRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 478 ~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
. .++|.+............. ......+.. +.|+|||++++...
T Consensus 230 ~--I~iwd~~~~~~~~~~~~~~~~~~~~~v~~------l~~spdg~~l~s~s 273 (753)
T 3jro_A 230 T--CIIWTQDNEQGPWKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (753)
T ss_dssp C--EEEEEESSSSSCCBCCBSSSSCCSSCCCC------EEECTTTCCEEEEC
T ss_pred E--EEEecCCCCCCcceeEEeccCCCCCceEE------EEEcCCCCEEEEEc
Confidence 2 3566555432110001111 111112222 78999999988775
No 373
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.12 E-value=8.8e-09 Score=110.10 Aligned_cols=246 Identities=10% Similarity=-0.005 Sum_probs=144.3
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
....|+|+|||+.|+++.. ....|++++++++ .+.+...... +..++++|||++++..
T Consensus 29 ~~eg~~~d~~g~~l~~~~~--------~~~~i~~~~~~~~-~~~~~~~~~~-----~~~l~~~~dg~l~v~~-------- 86 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDV--------RQNRTWAWSDDGQ-LSPEMHPSHH-----QNGHCLNKQGHLIACS-------- 86 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEG--------GGTEEEEEETTSC-EEEEESSCSS-----EEEEEECTTCCEEEEE--------
T ss_pred cccCCeEeCCCCEEEEEeC--------CCCEEEEEECCCC-eEEEECCCCC-----cceeeECCCCcEEEEe--------
Confidence 4567999999998888653 2468999999988 5555432221 5578899999866543
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC------CcccccccCCC
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPD 342 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~------~~~~~~~~SpD 342 (953)
.+...|++++. +|+.+.+... ..+..++++||
T Consensus 87 -----------------------------------------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 87 -----------------------------------------HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp -----------------------------------------TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT
T ss_pred -----------------------------------------cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC
Confidence 02246888888 8876655332 23567899999
Q ss_pred CcEEEEEEecCC---cc-ccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002209 343 EKYILISSIHRP---YS-FIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 343 G~~l~~~~~~~~---~~-~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
|+.++....... .. ...........|+.++.+ +..+.+.... ..+..++|+|||+.+ +. +
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~gi~~s~dg~~l-v~-~ 189 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------VKPNGLAFLPSGNLL-VS-D 189 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------SSEEEEEECTTSCEE-EE-E
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------CCCccEEECCCCCEE-EE-e
Confidence 984443210000 00 000000012367777776 4444333211 123468999999976 43 1
Q ss_pred eccCCCcccccccCCeEEEEecCCCCCCCc----eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCC
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGP----EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA 494 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~----~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~ 494 (953)
...+.|+++++ ...++. +.+.........+++++||+ |+++. . ..|++++.++. .
T Consensus 190 -----------~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~---~~v~~~~~~g~--~ 248 (296)
T 3e5z_A 190 -----------TGDNATHRYCL--NARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--G---DGVHVLTPDGD--E 248 (296)
T ss_dssp -----------TTTTEEEEEEE--CSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--T---TEEEEECTTSC--E
T ss_pred -----------CCCCeEEEEEE--CCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--C---CeEEEECCCCC--E
Confidence 23457889886 212333 12211233456789999997 44443 2 26899998752 2
Q ss_pred cEEeecCCCccccCCCCCCCeEe-ccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceE
Q 002209 495 PRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (953)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~p~~~~-SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~ 565 (953)
...+ ..+.. ... +.| +|||+.|+....+ .|+.+++++++.+
T Consensus 249 ~~~~-~~~~~-~~~------~~f~~~d~~~L~v~t~~----------------------~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 249 LGRV-LTPQT-TSN------LCFGGPEGRTLYMTVST----------------------EFWSIETNVRGLE 290 (296)
T ss_dssp EEEE-ECSSC-CCE------EEEESTTSCEEEEEETT----------------------EEEEEECSCCBCC
T ss_pred EEEE-ECCCC-cee------EEEECCCCCEEEEEcCC----------------------eEEEEEccccccc
Confidence 2222 22211 111 668 6898888776521 4999998877654
No 374
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.12 E-value=9.7e-10 Score=113.07 Aligned_cols=145 Identities=10% Similarity=0.052 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----CCcccEEEEcccCCCCCCCCcCcccccchh
Q 002209 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-----PHLFCCGIARSGAYNRTLTPFGFQNEDRTL 810 (953)
Q Consensus 736 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~ 810 (953)
+....+++.++++.|.+... .+++.++||||||.++..++.++ |++++.+|++++.++...... .....
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~---~~~~~- 150 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST---TAKTS- 150 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS---SCCCH-
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc---cccCH-
Confidence 45678888999999987653 36899999999999999999876 678999999988765332110 00011
Q ss_pred hhhHHHHHhcCcccccCCCCCcEEEEEeC----CCCCCCCchHHHHHHHHHHHhCCCcEEEEEeC--CCCccCCCcccHH
Q 002209 811 WEATSTYVEMSPFMSANKLKKPILLVHGE----EDNNSGTLTMQSDRFFNALKGHGALCRLVILP--FESHGYAARESIM 884 (953)
Q Consensus 811 ~~~~~~~~~~sp~~~~~~i~~P~Li~~G~----~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~H~~~~~~~~~ 884 (953)
....+... ...+.+ +.|+|+|+|+ .|.+|| ...++.+...++......+.+.+. +++|... .++ .
T Consensus 151 --~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp--~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l-~e~-~ 221 (250)
T 3lp5_A 151 --MFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVP--YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDL-PQN-K 221 (250)
T ss_dssp --HHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCC--HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCH-HHH-H
T ss_pred --HHHHHHhc--cccCCC-CceEEEEEecCCCCCCceee--HHHHHHHHHHhcccccceEEEEEeCCCCchhcc-hhC-H
Confidence 11122221 112222 6899999999 999998 888777777776544444445555 4669764 232 3
Q ss_pred HHHHHHHHHHH
Q 002209 885 HVLWETDRWLQ 895 (953)
Q Consensus 885 ~~~~~i~~fl~ 895 (953)
.+.+.+.+||.
T Consensus 222 ~v~~~I~~FL~ 232 (250)
T 3lp5_A 222 QIVSLIRQYLL 232 (250)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHh
Confidence 56666666654
No 375
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=6.9e-09 Score=113.59 Aligned_cols=135 Identities=8% Similarity=0.016 Sum_probs=83.9
Q ss_pred ceEEEEEc-CCceeEeC-CC--CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE--EEeccCCCc
Q 002209 314 TQLVLVSL-DGTVKEIG-PP--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLA 387 (953)
Q Consensus 314 ~~l~~~~~-~g~~~~l~-~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~--~~l~~~~~~ 387 (953)
+.|.++|+ +++...+. .. ..+..++|+|||+.|+..+.+ +.|.+||+..+.. ..+..
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-------------g~i~iwd~~~~~~~~~~~~~---- 211 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-------------GILDVYNLSSPDQASSRFPV---- 211 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-------------SCEEEEESSCTTSCCEECCC----
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCCCCccEEec----
Confidence 46778888 77654433 22 468889999999999887644 3899999985542 23322
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee---cccccC--Cee
Q 002209 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK---LDLRYG--GIS 462 (953)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~---~~~~~~--~~~ 462 (953)
.....+..++|+|||+.++.. + .+.|.+||+ ..+.....+.. ....+. .++
T Consensus 212 --------~h~~~v~~l~fs~~g~~l~s~-------------~-~~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T 3lrv_A 212 --------DEEAKIKEVKFADNGYWMVVE-------------C-DQTVVCFDL--RKDVGTLAYPTYTIPEFKTGTVTYD 267 (343)
T ss_dssp --------CTTSCEEEEEECTTSSEEEEE-------------E-SSBEEEEET--TSSTTCBSSCCCBC-----CCEEEE
T ss_pred --------cCCCCEEEEEEeCCCCEEEEE-------------e-CCeEEEEEc--CCCCcceeecccccccccccceEEE
Confidence 012345789999999876665 3 337999997 22222222221 223333 399
Q ss_pred eccCCceEEEEEecccCceEEEEEcCCC
Q 002209 463 WCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 463 ~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
|+|+|++|+..+..+ ...++|.++...
T Consensus 268 ~~~~g~~l~~~s~~d-~~i~v~~~~~~~ 294 (343)
T 3lrv_A 268 IDDSGKNMIAYSNES-NSLTIYKFDKKT 294 (343)
T ss_dssp ECTTSSEEEEEETTT-TEEEEEEECTTT
T ss_pred ECCCCCEEEEecCCC-CcEEEEEEcccc
Confidence 999999998876522 224677765443
No 376
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=5.7e-09 Score=114.29 Aligned_cols=166 Identities=10% Similarity=0.064 Sum_probs=102.4
Q ss_pred ceEEEEEc-CCc-eeEeCCC--CcccccccCC--CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCc
Q 002209 314 TQLVLVSL-DGT-VKEIGPP--AVYTSLDPSP--DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLA 387 (953)
Q Consensus 314 ~~l~~~~~-~g~-~~~l~~~--~~~~~~~~Sp--DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~ 387 (953)
..+..+++ +++ .+.+... ..+..++|+| +|++++..+.+. .|.+||+.++....+.....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg-------------~i~~wd~~~~~~~~~~~~~~- 169 (343)
T 3lrv_A 104 NQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRG-------------TIGFQSYEDDSQYIVHSAKS- 169 (343)
T ss_dssp TEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTC-------------CEEEEESSSSCEEEEECCCS-
T ss_pred CceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCC-------------cEEEEECCCCcEEEEEecCC-
Confidence 35556677 555 3344322 5688899999 999998887443 89999998665543332111
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEee-cccccCCeeecc
Q 002209 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHK-LDLRYGGISWCD 465 (953)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~-~~~~~~~~~~Sp 465 (953)
...+..++|+|||+.++.. +..+.|.+||+ .++... ..+.. +...+..+.|+|
T Consensus 170 ----------~~~i~~~~~~pdg~~lasg-------------~~dg~i~iwd~--~~~~~~~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 170 ----------DVEYSSGVLHKDSLLLALY-------------SPDGILDVYNL--SSPDQASSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp ----------SCCCCEEEECTTSCEEEEE-------------CTTSCEEEEES--SCTTSCCEECCCCTTSCEEEEEECT
T ss_pred ----------CCceEEEEECCCCCEEEEE-------------cCCCEEEEEEC--CCCCCCccEEeccCCCCEEEEEEeC
Confidence 1234679999999876655 44668999996 333333 35554 567788899999
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCCCcEEeec--CCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD--RSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
||+.|+..+ ++ .+.++|+.++. ....+.. .....+ ....+.|+|+|++|+...
T Consensus 225 ~g~~l~s~~-~~----~v~iwd~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 225 NGYWMVVEC-DQ----TVVCFDLRKDV-GTLAYPTYTIPEFKT----GTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TSSEEEEEE-SS----BEEEEETTSST-TCBSSCCCBC---------CCEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEe-CC----eEEEEEcCCCC-cceeecccccccccc----cceEEEECCCCCEEEEec
Confidence 999998877 33 34455555531 1111110 000000 001278999999998765
No 377
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.10 E-value=2.6e-08 Score=113.96 Aligned_cols=284 Identities=11% Similarity=0.035 Sum_probs=164.3
Q ss_pred EeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002209 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (953)
Q Consensus 195 ~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 274 (953)
.+++|++.|+... ....|.++|+.+++........... +..++|+|++ .|+...
T Consensus 127 ~~~~~~~~l~sgs---------~dg~i~vwd~~~~~~~~~~~~h~~~----V~~l~~~~~~-~l~s~s------------ 180 (464)
T 3v7d_B 127 CLQFEDNYVITGA---------DDKMIRVYDSINKKFLLQLSGHDGG----VWALKYAHGG-ILVSGS------------ 180 (464)
T ss_dssp EEEEETTEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEECSTT-EEEEEE------------
T ss_pred EEEECCCEEEEEc---------CCCcEEEEECCCCcEEEEEeCCCcC----EEEEEEcCCC-EEEEEe------------
Confidence 4556788877754 3567888899888765443322222 7789999999 555431
Q ss_pred CCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC-CcccccccC--CCCcEEEEE
Q 002209 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPS--PDEKYILIS 349 (953)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~S--pDG~~l~~~ 349 (953)
..+.|.++|+ +|+.. .+... ..+..++|+ +|++.|+..
T Consensus 181 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~ 223 (464)
T 3v7d_B 181 -------------------------------------TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 223 (464)
T ss_dssp -------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEE
T ss_pred -------------------------------------CCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEE
Confidence 2245777888 77543 34333 677777777 688888887
Q ss_pred EecCCccccccCCCCCcceEEEeccCceEEEeccCCCcc--------cCCc---cccccccCccceeeccCCCCceEEEE
Q 002209 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE--------DIPI---AFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~--------~~p~---~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
+.+. .|.+||+............... ..+. ...+. ...-..++++++.++..
T Consensus 224 s~d~-------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~~~-- 286 (464)
T 3v7d_B 224 SRDN-------------TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH--MASVRTVSGHGNIVVSG-- 286 (464)
T ss_dssp ETTS-------------CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC--SSCEEEEEEETTEEEEE--
T ss_pred cCCC-------------cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc--cceEEEEcCCCCEEEEE--
Confidence 7443 8999999854322111000000 0000 00001 01123457777766555
Q ss_pred eccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEe
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 498 (953)
+..+.|.+||+ .++.....+..+...+..+.|+|||+.|+..+.++ .|.++|+.++ +....
T Consensus 287 -----------~~d~~i~vwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~--~~~~~ 347 (464)
T 3v7d_B 287 -----------SYDNTLIVWDV--AQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT----TIRIWDLENG--ELMYT 347 (464)
T ss_dssp -----------ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS----CEEEEETTTT--EEEEE
T ss_pred -----------eCCCeEEEEEC--CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC----cEEEEECCCC--cEEEE
Confidence 44568999996 22222333445566677899999999988776543 4666676664 33333
Q ss_pred ecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceee
Q 002209 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (953)
Q Consensus 499 ~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~ 578 (953)
.......+.. +.|+ +++|+....+ ..+.+||+.+++..........
T Consensus 348 ~~~h~~~v~~------~~~~--~~~l~s~s~d---------------------g~v~vwd~~~~~~~~~~~~~~~----- 393 (464)
T 3v7d_B 348 LQGHTALVGL------LRLS--DKFLVSAAAD---------------------GSIRGWDANDYSRKFSYHHTNL----- 393 (464)
T ss_dssp ECCCSSCEEE------EEEC--SSEEEEEETT---------------------SEEEEEETTTCCEEEEEECTTC-----
T ss_pred EeCCCCcEEE------EEEc--CCEEEEEeCC---------------------CcEEEEECCCCceeeeecCCCC-----
Confidence 3333222221 4444 5666665522 2499999988765544332211
Q ss_pred eEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeE
Q 002209 579 TVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (953)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~ 623 (953)
.....|+++++.++... . ..+.++++.+++...
T Consensus 394 -------~~~~~~~~~~~~l~~~~-d----g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 394 -------SAITTFYVSDNILVSGS-E----NQFNIYNLRSGKLVH 426 (464)
T ss_dssp -------CCEEEEEECSSEEEEEE-T----TEEEEEETTTCCEEE
T ss_pred -------ccEEEEEeCCCEEEEec-C----CeEEEEECCCCcEEe
Confidence 11235788888666433 2 469999998887553
No 378
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.10 E-value=7.5e-09 Score=112.72 Aligned_cols=238 Identities=13% Similarity=0.043 Sum_probs=135.4
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~ 243 (953)
.|++|+..+ ++.+.+.. .....+..+.|+|||+.++.... .......|++++.++++.+.+...... .
T Consensus 67 ~i~~~d~~~----~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~-----~~~~~~~i~~~d~~~~~~~~~~~~~~~--~ 134 (333)
T 2dg1_A 67 NIFKINPET----KEIKRPFV-SHKANPAAIKIHKDGRLFVCYLG-----DFKSTGGIFAATENGDNLQDIIEDLST--A 134 (333)
T ss_dssp EEEEECTTT----CCEEEEEE-CSSSSEEEEEECTTSCEEEEECT-----TSSSCCEEEEECTTSCSCEEEECSSSS--C
T ss_pred EEEEEeCCC----CcEEEEee-CCCCCcceEEECCCCcEEEEeCC-----CCCCCceEEEEeCCCCEEEEEEccCcc--C
Confidence 678888743 33333331 12235788899999975544321 011235899999998876643221110 1
Q ss_pred ccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-C
Q 002209 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D 322 (953)
Q Consensus 244 ~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~ 322 (953)
..+..+.++|||+.++.. .... ..+ ....||+++. +
T Consensus 135 ~~~~~i~~d~~g~l~v~~-~~~~-----------------------------------~~~-------~~~~l~~~~~~~ 171 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTD-FRGY-----------------------------------STN-------PLGGVYYVSPDF 171 (333)
T ss_dssp CCEEEEEECTTSCEEEEE-CCCB-----------------------------------TTB-------CCEEEEEECTTS
T ss_pred CcccceEECCCCCEEEEe-cccc-----------------------------------ccC-------CCceEEEEeCCC
Confidence 115578899999755533 0000 000 2357889988 5
Q ss_pred CceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc--CceEEEeccCCCcccCCcccccccc
Q 002209 323 GTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD--GIFVRELCDLPLAEDIPIAFNSVRK 399 (953)
Q Consensus 323 g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~--g~~~~~l~~~~~~~~~p~~~~~~~~ 399 (953)
++.+.+... .....++|+|||++|+++... ...|++|+++ +.....+....... +.+. .
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~------------~~~i~~~d~~~~g~~~~~~~~~~~~~-----~~~~-~ 233 (333)
T 2dg1_A 172 RTVTPIIQNISVANGIALSTDEKVLWVTETT------------ANRLHRIALEDDGVTIQPFGATIPYY-----FTGH-E 233 (333)
T ss_dssp CCEEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEECTTSSSEEEEEEEEEEE-----CCSS-S
T ss_pred CEEEEeecCCCcccceEECCCCCEEEEEeCC------------CCeEEEEEecCCCcCcccccceEEEe-----cCCC-C
Confidence 666665443 456678999999988777522 1378999985 33332221000000 0000 1
Q ss_pred CccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeeccc------ccCCeeeccCCceEEEE
Q 002209 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYE 473 (953)
Q Consensus 400 ~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~------~~~~~~~SpDg~~l~~~ 473 (953)
.+..+++++||+ +|... ...+.|++++. ++.....+..... ....++|+|||+.|+++
T Consensus 234 ~~~~i~~d~~G~--l~v~~-----------~~~~~v~~~d~---~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~ 297 (333)
T 2dg1_A 234 GPDSCCIDSDDN--LYVAM-----------YGQGRVLVFNK---RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIIC 297 (333)
T ss_dssp EEEEEEEBTTCC--EEEEE-----------ETTTEEEEECT---TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred CCCceEECCCCC--EEEEE-----------cCCCEEEEECC---CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEE
Confidence 234688999996 23311 12357888884 4443344433322 46678999999888877
Q ss_pred Eeccc--CceEEEEEcCCC
Q 002209 474 SWYKT--RRTRTWVISPGS 490 (953)
Q Consensus 474 ~~~~~--~~~~l~~~d~~~ 490 (953)
...+. ....||.+++..
T Consensus 298 ~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 298 SNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EECGGGTCCEEEEEEECSS
T ss_pred eCccCCCCCceEEEEeccc
Confidence 65431 234788888654
No 379
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.09 E-value=1.8e-08 Score=109.70 Aligned_cols=237 Identities=10% Similarity=0.018 Sum_probs=135.4
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
....++|+|||+ |+++.. ....|+++++++++.+.+....... +..++|+|||+.++.....
T Consensus 46 ~~~~~~~~~~g~-l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~----~~~i~~~~dg~l~v~~~~~----- 107 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDV--------FEGNIFKINPETKEIKRPFVSHKAN----PAAIKIHKDGRLFVCYLGD----- 107 (333)
T ss_dssp CEEEEEECTTSC-EEEEET--------TTCEEEEECTTTCCEEEEEECSSSS----EEEEEECTTSCEEEEECTT-----
T ss_pred cccCcEECCCCC-EEEEEC--------CCCEEEEEeCCCCcEEEEeeCCCCC----cceEEECCCCcEEEEeCCC-----
Confidence 457899999998 555431 2458999999998877665322221 6688999999866644100
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEe-CC--C-CcccccccCCCCc
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEI-GP--P-AVYTSLDPSPDEK 344 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l-~~--~-~~~~~~~~SpDG~ 344 (953)
.+ ....|++++. +++.+.+ .. . ..+..+.++|||+
T Consensus 108 ---------------------------------~~-------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 108 ---------------------------------FK-------STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp ---------------------------------SS-------SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred ---------------------------------CC-------CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence 00 1246888888 6655533 21 1 4566789999997
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
.++ +..... .......|+.++.+++..+.+.... ..+..++|+|||+.+++. +
T Consensus 148 l~v-~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~i~~~~dg~~l~v~-~------ 200 (333)
T 2dg1_A 148 FYF-TDFRGY------STNPLGGVYYVSPDFRTVTPIIQNI-------------SVANGIALSTDEKVLWVT-E------ 200 (333)
T ss_dssp EEE-EECCCB------TTBCCEEEEEECTTSCCEEEEEEEE-------------SSEEEEEECTTSSEEEEE-E------
T ss_pred EEE-Eecccc------ccCCCceEEEEeCCCCEEEEeecCC-------------CcccceEECCCCCEEEEE-e------
Confidence 544 332110 0011236888888766655543210 123568999999866554 1
Q ss_pred cccccccCCeEEEEecCCCCCCCceEE-----eecc--cccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEE
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGPEIL-----HKLD--LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~~~l-----~~~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (953)
...+.|++++. ..++.....+ .... .....+.+++||+. +++...+ ..|++++.++. ....
T Consensus 201 -----~~~~~i~~~d~-~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~~---~~v~~~d~~g~--~~~~ 268 (333)
T 2dg1_A 201 -----TTANRLHRIAL-EDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL-YVAMYGQ---GRVLVFNKRGY--PIGQ 268 (333)
T ss_dssp -----GGGTEEEEEEE-CTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE-EEEEETT---TEEEEECTTSC--EEEE
T ss_pred -----CCCCeEEEEEe-cCCCcCcccccceEEEecCCCCCCCceEECCCCCE-EEEEcCC---CEEEEECCCCC--EEEE
Confidence 22457888885 1122222221 1111 23456899999974 3333222 26888888542 2222
Q ss_pred eecCCCc------cccCCCCCCCeEeccCCCEEEEEeee
Q 002209 498 LFDRSSE------DVYSDPGSPMMRRTSTGTYVIAKIKK 530 (953)
Q Consensus 498 ~~~~~~~------~~~~~~~~p~~~~SpDG~~l~~~~~~ 530 (953)
+. .... ...+ +.|+|||+.|++....
T Consensus 269 ~~-~~~~~~g~~~~~~~------~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 269 IL-IPGRDEGHMLRSTH------PQFIPGTNQLIICSND 300 (333)
T ss_dssp EE-CTTGGGTCSCBCCE------EEECTTSCEEEEEEEC
T ss_pred EE-cCCCccccccCcce------EEECCCCCEEEEEeCc
Confidence 22 1111 1111 7799999888776643
No 380
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.08 E-value=1.5e-08 Score=109.89 Aligned_cols=234 Identities=12% Similarity=0.031 Sum_probs=141.2
Q ss_pred CCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCcc
Q 002209 112 PALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKL 191 (953)
Q Consensus 112 ~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~~ 191 (953)
..+.|+||++.++++... . +.|++++..+ +..+.+. ++ ..+
T Consensus 52 egp~~~~~~~~l~~~d~~--------------------------~------~~i~~~d~~~----~~~~~~~-~~--~~v 92 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNIL--------------------------E------RELHELHLAS----GRKTVHA-LP--FMG 92 (326)
T ss_dssp EEEEEETTTTEEEEEEGG--------------------------G------TEEEEEETTT----TEEEEEE-CS--SCE
T ss_pred cCCeEeCCCCEEEEEECC--------------------------C------CEEEEEECCC----CcEEEEE-CC--Ccc
Confidence 368899999888887642 0 2678888743 3333332 22 357
Q ss_pred cceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCC
Q 002209 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (953)
Q Consensus 192 ~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 271 (953)
..+.|+|||+.++.. ...|+++|.++|+.+.+...........+..+.++|||+. +++.....
T Consensus 93 ~~i~~~~dg~l~v~~-----------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~~~----- 155 (326)
T 2ghs_A 93 SALAKISDSKQLIAS-----------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGAL-WIGTMGRK----- 155 (326)
T ss_dssp EEEEEEETTEEEEEE-----------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCE-EEEEEETT-----
T ss_pred eEEEEeCCCeEEEEE-----------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCE-EEEeCCCc-----
Confidence 788999999866653 1259999999888776654322111112557889999984 44411000
Q ss_pred CCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCC-CcccccccCCCCcEEEEEE
Q 002209 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISS 350 (953)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~ 350 (953)
.. .....||+++ +|+.+.+... .....++|||||+.|++..
T Consensus 156 ------------------------------~~-------~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 156 ------------------------------AE-------TGAGSIYHVA-KGKVTKLFADISIPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp ------------------------------CC-------TTCEEEEEEE-TTEEEEEEEEESSEEEEEECTTSCEEEEEE
T ss_pred ------------------------------CC-------CCceEEEEEe-CCcEEEeeCCCcccCCeEEcCCCCEEEEEE
Confidence 00 0335788888 7877666443 4456789999999988875
Q ss_pred ecCCccccccCCCCCcceEEEecc--Cc-eE---EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 351 IHRPYSFIVPCGRFPRQVGVWTTD--GI-FV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 351 ~~~~~~~~~~~~~~~~~i~~~d~~--g~-~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
.. ...|++++++ ++ .. +.+...... ...+..+.+++||. +|...
T Consensus 198 ~~------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~----------~~~p~gi~~d~~G~--lwva~------ 247 (326)
T 2ghs_A 198 TK------------VNRLMRVPLDARTGLPTGKAEVFIDSTGI----------KGGMDGSVCDAEGH--IWNAR------ 247 (326)
T ss_dssp TT------------TCEEEEEEBCTTTCCBSSCCEEEEECTTS----------SSEEEEEEECTTSC--EEEEE------
T ss_pred CC------------CCEEEEEEcccccCCcccCceEEEECCCC----------CCCCCeeEECCCCC--EEEEE------
Confidence 22 2379999985 33 21 112111100 01234678888885 23211
Q ss_pred cccccccCCeEEEEecCCCCCCCceEEeecccccCCeeec-cCCceEEEEEecc
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWC-DDSLALVYESWYK 477 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~S-pDg~~l~~~~~~~ 477 (953)
...+.|++++. ++.....+......+..++|+ +|++.|++.....
T Consensus 248 -----~~~~~v~~~d~---~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 248 -----WGEGAVDRYDT---DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -----ETTTEEEEECT---TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -----eCCCEEEEECC---CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 12347888883 444344454444456778998 8999888776443
No 381
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=2.6e-08 Score=110.43 Aligned_cols=275 Identities=11% Similarity=-0.000 Sum_probs=146.4
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccc-cCCCCcceEEEEECCCCceeecccCC-Ccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSP-DIY 241 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~-~~~~~~~~l~~~d~~~g~~~~lt~~~-~~~ 241 (953)
.|.++|..+ .+ .+..++-+... .+.+||||++|+........ ..+.....|.++|+.+++...-...+ ...
T Consensus 100 ~VsVID~~t----~~--vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 100 QQFVIDGST----GR--ILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEETTT----TE--EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC
T ss_pred eEEEEECCC----CE--EEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc
Confidence 678988743 22 22223333444 89999999999886531100 00112457999999998764322212 000
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 242 ~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
. ......+.++|||++||++.. . ....|.++
T Consensus 173 ~~~g~~P~~~~~spDGk~lyV~n~--------------------------------------~---------~~~~VsVI 205 (426)
T 3c75_H 173 FLVGTYQWMNALTPDNKNLLFYQF--------------------------------------S---------PAPAVGVV 205 (426)
T ss_dssp CCBSCCGGGSEECTTSSEEEEEEC--------------------------------------S---------SSCEEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEec--------------------------------------C---------CCCeEEEE
Confidence 0 001347899999999998710 0 12467888
Q ss_pred Ec-CCce-eEeCCCCc--------ccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-Eec-cCCCc
Q 002209 320 SL-DGTV-KEIGPPAV--------YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELC-DLPLA 387 (953)
Q Consensus 320 ~~-~g~~-~~l~~~~~--------~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~-~~~~~ 387 (953)
|+ +++. ..+.-++. ..-+.+++||+.+++.. ..+.+. ..+ ....
T Consensus 206 D~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-----------------------~~~~v~~~~~~~~~v- 261 (426)
T 3c75_H 206 DLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDF-----------------------ADGETKVTNTEVFHT- 261 (426)
T ss_dssp ETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEEC-----------------------CTTCCEEEECCCCSC-
T ss_pred ECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEEC-----------------------CCCcEEEEeeeeecc-
Confidence 88 7654 33332211 11134455555444332 211111 111 0000
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee-------------c
Q 002209 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-------------L 454 (953)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~-------------~ 454 (953)
...|. ...+.+++||+.++|. ...+.++++|. .++....+.. .
T Consensus 262 ~~~p~--------~~~~~~~~dg~~~~~~-------------s~~g~V~ViD~---~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 262 EDELL--------INHPAFSLRSGRLVWP-------------TYTGKIFQADL---TAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TTSCB--------CSCCEECTTTCEEEEE-------------BTTSEEEEEEE---CSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCce--------eeEeeecCCCCEEEEE-------------eCCCcEEEEec---cCCceEEeeeeeeccccccccccc
Confidence 00111 1235689999888776 23457889885 4333222211 0
Q ss_pred ccccCCeeeccCCceEEEEEecc------cCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 455 DLRYGGISWCDDSLALVYESWYK------TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 455 ~~~~~~~~~SpDg~~l~~~~~~~------~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
......++++|||++|+...... .....|+++|+.+.. ....+.-.. ...+ +.|+|||+.++|..
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k-vv~~I~vg~--~P~g------ia~spDg~~~lyv~ 388 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE-RINKIELGH--EIDS------INVSQDAEPLLYAL 388 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEEEEE--EECE------EEECCSSSCEEEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe-EEEEEECCC--CcCe------EEEccCCCEEEEEE
Confidence 11122378999999988764321 113479999999862 122221111 1111 78999999555655
Q ss_pred eeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEe
Q 002209 529 KKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (953)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~ 568 (953)
+.. ...|.++|+.+++...-.
T Consensus 389 n~~-------------------s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 389 SAG-------------------TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp ETT-------------------TTEEEEEETTTCCEEEEE
T ss_pred cCC-------------------CCeEEEEECCCCCEEEEe
Confidence 311 125999999999876543
No 382
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.07 E-value=6.7e-09 Score=113.14 Aligned_cols=205 Identities=11% Similarity=0.067 Sum_probs=118.9
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCc----ee-ecccCCCccccccccceEEec--CCeEEEEE
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----AR-PLFQSPDIYLNAIFDNFVWVN--NSTLLVCT 261 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~----~~-~lt~~~~~~~~~~~~~~~wsp--Dg~~l~~~ 261 (953)
..+....|+|||+.|+.... ...|.++++.++. .. .+..+.. .+..++|+| |++.|+..
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSS---------DQHIKVFKLDKDTSNWELSDSWRAHDS-----SIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp SCEEEEEECSSSSEEEEEET---------TSEEEEEEECSSSCCEEEEEEEECCSS-----CEEEEEECCGGGCSEEEEE
T ss_pred cceeEEEEcCCCCEEEEeeC---------CCeEEEEECCCCCCcceecceeccCCC-----cEEEEEEcCCCCCCEEEEE
Confidence 46899999999999887552 4567777776542 11 1222222 277899998 68888876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc----------eeEeCC
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----------VKEIGP 330 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~----------~~~l~~ 330 (953)
. ..+.|.++++ +++ ...+..
T Consensus 78 ~-------------------------------------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 108 (351)
T 3f3f_A 78 S-------------------------------------------------YDKTVKLWEEDPDQEECSGRRWNKLCTLND 108 (351)
T ss_dssp E-------------------------------------------------TTSCEEEEEECTTSCTTSSCSEEEEEEECC
T ss_pred c-------------------------------------------------CCCeEEEEecCCCcccccccCcceeeeecc
Confidence 1 1234556666 432 333433
Q ss_pred C-CcccccccCCC--CcEEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCcccCCccccccccCccceee
Q 002209 331 P-AVYTSLDPSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINW 406 (953)
Q Consensus 331 ~-~~~~~~~~SpD--G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~w 406 (953)
. ..+..++|+|+ |+.|+..+.+. .|.+||+..+.. +.+...................+..+.|
T Consensus 109 ~~~~v~~~~~~~~~~~~~l~~~~~dg-------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 109 SKGSLYSVKFAPAHLGLKLACLGNDG-------------ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTC-------------EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cCCceeEEEEcCCCCCcEEEEecCCC-------------cEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 3 77889999999 99998887443 899999874331 1111000000001111122344567999
Q ss_pred ccC---CCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE---EeecccccCCeeeccCC----ceEEEEEec
Q 002209 407 RSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI---LHKLDLRYGGISWCDDS----LALVYESWY 476 (953)
Q Consensus 407 spD---g~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~---l~~~~~~~~~~~~SpDg----~~l~~~~~~ 476 (953)
+|+ ++.++.. ...+.+..++. ..+.... +..+...+..+.|+|+| +.|+....+
T Consensus 176 ~p~~~~~~~l~~~-------------~~~~~~~~~~~---~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 176 CPSRFSPEKLAVS-------------ALEQAIIYQRG---KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CCCSSSCCEEEEE-------------ETTEEEEEEEC---TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccCCCCCcEEEEe-------------cCCCcEEEEcc---CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 998 6655444 22334444442 3344322 23445567789999998 566665544
Q ss_pred ccCceEEEEEc
Q 002209 477 KTRRTRTWVIS 487 (953)
Q Consensus 477 ~~~~~~l~~~d 487 (953)
+ ..++|.+.
T Consensus 240 g--~i~iwd~~ 248 (351)
T 3f3f_A 240 G--RIRIFKIT 248 (351)
T ss_dssp S--CEEEEEEE
T ss_pred C--eEEEEeCC
Confidence 3 23666655
No 383
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.06 E-value=6.1e-10 Score=128.05 Aligned_cols=211 Identities=15% Similarity=0.051 Sum_probs=128.8
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHH-HHcCcEEEEcCCC-CC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW-LARGFAILGGPTT-PI 723 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~G~~V~~~~~~-~~ 723 (953)
+.|. +...+|.|.+.... .++|+|||+|||.+..+. ...+. .. .... ...|++|+.++|+ +.
T Consensus 82 ~edc--l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~--------~~~~~---~~-~~~~~~~~g~vvv~~nYRlg~ 145 (522)
T 1ukc_A 82 SEDC--LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENS--------NANYN---GT-QVIQASDDVIVFVTFNYRVGA 145 (522)
T ss_dssp ESCC--CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCC--------SCSCC---CH-HHHHHTTSCCEEEEECCCCHH
T ss_pred CCcC--CEEEEEECCCCCCC--CCCCEEEEECCCccccCC--------ccccC---cH-HHHHhcCCcEEEEEecccccc
Confidence 3454 45678888754322 358999999998655432 11221 11 1111 2469999998886 23
Q ss_pred CCCCChhhhh--hhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC----CCcccEEEEcccCC
Q 002209 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA----PHLFCCGIARSGAY 794 (953)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~~~~ 794 (953)
.|++...... ..+...+.|+.++++|+.++- ..|+++|.|+|+|+||.++..++... +.+|+++|+.+|..
T Consensus 146 ~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 146 LGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cccccchhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 3444432211 123567899999999998752 36999999999999999888777653 46899999999875
Q ss_pred CCCCCCcCcccccchhh-------------hhHHHHHhcCccc---------ccCCCCCc--EEEEEeCCCCCCCCchHH
Q 002209 795 NRTLTPFGFQNEDRTLW-------------EATSTYVEMSPFM---------SANKLKKP--ILLVHGEEDNNSGTLTMQ 850 (953)
Q Consensus 795 d~~~~~~~~~~~~~~~~-------------~~~~~~~~~sp~~---------~~~~i~~P--~Li~~G~~D~~v~~~~~~ 850 (953)
...... ......+ +..+.+...++.. .......| .+.++...|..+. +++
T Consensus 226 ~~~~~~----~~~~~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l--~~~ 299 (522)
T 1ukc_A 226 PTQRTV----SEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLV--PDE 299 (522)
T ss_dssp CCCCCS----GGGHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSS--CSC
T ss_pred CCcCCH----HHHHHHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCccc--CCC
Confidence 422111 0000000 0111222221111 11112234 5567777887765 677
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCccCC
Q 002209 851 SDRFFNALKGHGALCRLVILPFESHGYA 878 (953)
Q Consensus 851 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 878 (953)
..+++++-+..++++-+-...+++|.+.
T Consensus 300 p~~~~~~g~~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 300 LYNAFDAGNFIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp HHHHHHHTCSCCCCEEEEEETBGGGGTS
T ss_pred HHHHHhcCCCCCCCEEEEeecchhHHhh
Confidence 7787777666677777777889999875
No 384
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.05 E-value=3.6e-09 Score=118.33 Aligned_cols=267 Identities=8% Similarity=-0.078 Sum_probs=125.8
Q ss_pred CCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCC-CCc
Q 002209 112 PALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD-GAK 190 (953)
Q Consensus 112 ~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~-~~~ 190 (953)
....++|+++.||..+.+ +.|.|||+.. +.......+..+.. ...
T Consensus 93 ~~~~~~~~~~~las~~~d---------------------------------~~v~lw~~~~-~~~~~~~~~~~~~gH~~~ 138 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQD---------------------------------NTVRLIITKN-ETIITQHVLGGKSGHHNF 138 (393)
T ss_dssp ----CCEEEEEEEEEETT---------------------------------SCEEEEEEET-TEEEEEEEECTTTSCSSC
T ss_pred ceeecCCCCCEEEEEeCC---------------------------------CcEEEEECCC-CccceeeeecccCCCCCc
Confidence 345567888888887765 3678999854 21111122322332 237
Q ss_pred ccceEecc--------CCCeEEEEEeeccccCCCCcceEEEEECCCCce-eecccCCCccccccccceEEecCCeE-EEE
Q 002209 191 LNFVTWSQ--------DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDIYLNAIFDNFVWVNNSTL-LVC 260 (953)
Q Consensus 191 ~~~~~wSP--------DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~wspDg~~-l~~ 260 (953)
+..+.|+| ||+.||..+. +..|.+||+.++.. ..+..+... +..++|+|++.. |+.
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~---------D~tv~~Wd~~~~~~~~~~~~~~~~-----v~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGD---------DCTLIIWRLTDEGPILAGYPLSSP-----GISVQFRPSNPNQLIV 204 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEET---------TSEEEEEEEETTEEEEEEEECSSC-----EEEEEEETTEEEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEEC---------CCeEEEEECCCCceeeeecCCCCC-----cEEEEECCCCCceEEe
Confidence 99999998 9999988652 45677777765543 333333332 668999999864 554
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCC--ceeEeCCC-Cccccc
Q 002209 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG--TVKEIGPP-AVYTSL 337 (953)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g--~~~~l~~~-~~~~~~ 337 (953)
...+... .+++...+....... . ... .....++..+... ........ ..+..+
T Consensus 205 ~~~d~~v------------~~wd~~t~~~~~~~~-----~-~~~------~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v 260 (393)
T 4gq1_A 205 GERNGNI------------RIFDWTLNLSAEENS-----Q-TEL------VKNPWLLTLNTLPLVNTCHSSGIASSLANV 260 (393)
T ss_dssp EETTSEE------------EEEETTCCC----------------------CSCCCSEEEESGGGC------CCSSSCSEE
T ss_pred cCCCCEE------------EEEECCCCccccccc-----c-cCC------cccceEEecccccceeeeecccccccceee
Confidence 4211110 111111000000000 0 000 0000001111100 00001111 445566
Q ss_pred ccC-CCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcc----cCCccc-cccccCccceeeccCC
Q 002209 338 DPS-PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE----DIPIAF-NSVRKGMRSINWRSDK 410 (953)
Q Consensus 338 ~~S-pDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~----~~p~~~-~~~~~~~~~~~wspDg 410 (953)
.|+ |||+.|+..+.+ +.+.+||+..+. ...+....... ..|... ...........|+|..
T Consensus 261 ~~~~~dg~~l~s~s~d-------------~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 261 RWIGSDGSGILAMCKS-------------GAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp EEETTTTCEEEEECTT-------------SEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred eeecCCCCEEEEEeCC-------------CCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCC
Confidence 665 899999877644 389999997433 22232211110 001000 0000111223344433
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEec
Q 002209 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~ 476 (953)
..++... .+..+.|++||+ .++.....+..+...+..++|||||+.|++++..
T Consensus 328 ~~~~~~s-----------gs~Dg~V~lwd~--~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 328 MDYFATA-----------HSQHGLIQLINT--YEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp TTEEEEE-----------ETTTTEEEEEET--TCTTCCEEEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred CCEEEEE-----------ECCCCEEEEEEC--CCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 2222221 133568999996 3444455566677778899999999999988643
No 385
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.05 E-value=4.3e-08 Score=106.67 Aligned_cols=269 Identities=12% Similarity=0.069 Sum_probs=139.8
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCC-----
Q 002209 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD----- 187 (953)
Q Consensus 113 ~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~----- 187 (953)
.+.+||||++|.....- .+.. .+....+.|.++|..+ + .....|. ++.
T Consensus 82 ~va~spDG~~lyVan~~--------------------~~r~---~~G~~~~~VsviD~~t-~--~v~~~I~-v~~g~r~~ 134 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTV--------------------FSRI---ARGERTDYVEVFDPVT-L--LPTADIE-LPDAPRFL 134 (386)
T ss_dssp EEEECTTSSCEEEEEEE--------------------EEET---TEEEEEEEEEEECTTT-C--CEEEEEE-ETTCCCCC
T ss_pred cEEECCCCCEEEEEccc--------------------cccc---ccCCCCCEEEEEECCC-C--eEEEEEE-CCCccccc
Confidence 48999999998776531 0000 0011113578888743 2 1122332 111
Q ss_pred -CCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccc---cceEEecCCeEEEEEec
Q 002209 188 -GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIF---DNFVWVNNSTLLVCTIP 263 (953)
Q Consensus 188 -~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~---~~~~wspDg~~l~~~~~ 263 (953)
+.......+||||++|+.... .....|.++|+++++...-...+........ ..+..++||+++++...
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~-------~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQF-------SPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEEC-------SSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred cCCCCceEEEcCCCCEEEEEEc-------CCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECC
Confidence 225677899999999887542 1246899999999876543322221000000 12356677776665511
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC--Cccccccc-
Q 002209 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVYTSLDP- 339 (953)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~--~~~~~~~~- 339 (953)
.. +.+ .+. + ..+... .....+.|
T Consensus 208 ~~------------------------------------------------g~v--~~~~~---~~~~~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 208 TE------------------------------------------------GTP--EITHT---EVFHPEDEFLINHPAYS 234 (386)
T ss_dssp SS------------------------------------------------SCC--EEEEC---CCCSCTTSCBCSCCEEE
T ss_pred CC------------------------------------------------CeE--EEeec---ceeccccccccccceeE
Confidence 00 000 000 1 001000 11223455
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~ 419 (953)
.+||+ ++|.+. .++++++|+.+...+.+..................+...++++||+++++.....
T Consensus 235 ~~dG~-~~~vs~-------------~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~ 300 (386)
T 3sjl_D 235 QKAGR-LVWPTY-------------TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 300 (386)
T ss_dssp TTTTE-EEEEBT-------------TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred cCCCc-EEEEeC-------------CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecc
Confidence 47885 556652 2489999998765444332211000000000111344567889999877766432
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
...+ ......+.|+++|+ ...+. +.+.- .....++.+|+||+.++|..+...+ .|.++|..++
T Consensus 301 ~~~~---~hk~~~~~V~viD~---~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~--~VsViD~~t~ 364 (386)
T 3sjl_D 301 RDEW---RHKTASRFVVVLDA---KTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDK--TLYIHDAESG 364 (386)
T ss_dssp CCTT---CTTSCEEEEEEEET---TTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTT--EEEEEETTTC
T ss_pred cccc---ccCCCCCEEEEEEC---CCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCC--eEEEEECCCC
Confidence 2111 11123468999996 44443 33322 2356689999999866666665444 7999999886
No 386
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.05 E-value=8.6e-09 Score=113.47 Aligned_cols=232 Identities=13% Similarity=0.026 Sum_probs=138.2
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
..+...+|||||+.|+...+ ..+.++++++++......... +..+.|+++++.++++..
T Consensus 20 ~~V~~v~fs~dg~~la~g~~----------~~~~iw~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~----- 78 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTL----------KSFEIYNVHPVAHIMSQEMRH------LSKVRMLHRTNYVAFVTG----- 78 (355)
T ss_dssp CCCCEEEECTTSSEEEEECS----------SEEEEEEETTEEEEEEEECSC------CCEEEECTTSSEEEEECS-----
T ss_pred CceEEEEECCCCCEEEEEcC----------CEEEEEecCCcceeeeeecCC------eEEEEEcCCCCEEEEEEC-----
Confidence 46889999999998887431 134566766655433222222 457788899888876510
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCCCcccccccCCCCcEE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPSPDEKYI 346 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~~~~~~~~~SpDG~~l 346 (953)
+...|.++|+ +|+. ..+.....+..+.|++++ +
T Consensus 79 -------------------------------------------~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~ 113 (355)
T 3vu4_A 79 -------------------------------------------VKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--I 113 (355)
T ss_dssp -------------------------------------------STTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--E
T ss_pred -------------------------------------------CccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--E
Confidence 1235677787 6643 333333667788898875 3
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCc--eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~--~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
++.. + +.|++||+.+. ....+.. + . ...++++ +.+++...
T Consensus 114 ~~~~-~-------------~~i~i~d~~~~~~~~~~~~~-------~-------~--~~~~~s~--~~la~~sg------ 155 (355)
T 3vu4_A 114 VVSY-G-------------DVISVFKFGNPWKRITDDIR-------F-------G--GVCEFSN--GLLVYSNE------ 155 (355)
T ss_dssp EEEE-T-------------TEEEEEESSTTCCBSSCCEE-------E-------E--EEEEEET--TEEEEEES------
T ss_pred EEEE-c-------------CEEEEEECCCCceeeEEecc-------C-------C--ceEEEEc--cEEEEeCC------
Confidence 3333 2 27999999854 2111111 0 0 1244555 33333200
Q ss_pred cccccccCCeEEEEecCCCCCCC-----------------ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEc
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEG-----------------PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~-----------------~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 487 (953)
...+.|.+||+ ..+. ...+..+...+..++|||||+.|+..+.++. .+.++|
T Consensus 156 -----~~~g~v~iwd~---~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~---~v~iwd 224 (355)
T 3vu4_A 156 -----FNLGQIHITKL---QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT---IIRVFK 224 (355)
T ss_dssp -----SCTTCEEEEEC---CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS---EEEEEE
T ss_pred -----CcCcEEEEEEC---CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC---EEEEEE
Confidence 23457888886 3322 3556667777889999999999988775542 144556
Q ss_pred CCCCCCCcEEeecC-CCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCc
Q 002209 488 PGSKDVAPRILFDR-SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (953)
Q Consensus 488 ~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~ 563 (953)
+.++. ....+... ....+.. ++|+|||++|+....+ ..+.+||+..+.
T Consensus 225 ~~~~~-~~~~~~~g~h~~~v~~------~~~s~~~~~l~s~s~d---------------------~~v~iw~~~~~~ 273 (355)
T 3vu4_A 225 TEDGV-LVREFRRGLDRADVVD------MKWSTDGSKLAVVSDK---------------------WTLHVFEIFNDQ 273 (355)
T ss_dssp TTTCC-EEEEEECTTCCSCEEE------EEECTTSCEEEEEETT---------------------CEEEEEESSCCS
T ss_pred CCCCc-EEEEEEcCCCCCcEEE------EEECCCCCEEEEEECC---------------------CEEEEEEccCCC
Confidence 66541 22223212 3333444 8899999999887632 248889987653
No 387
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.03 E-value=1.6e-07 Score=102.08 Aligned_cols=281 Identities=12% Similarity=0.005 Sum_probs=149.1
Q ss_pred eceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccc-cCCCCcceEEEEECCCCceeecccCCC-c
Q 002209 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSPD-I 240 (953)
Q Consensus 163 ~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~-~~~~~~~~l~~~d~~~g~~~~lt~~~~-~ 240 (953)
+.|+++|..+ + .....+ +.+... .+.+||||++|+.+...... ..+.....|.++|+++++...-...+. .
T Consensus 59 ~~V~ViD~~t-~--~v~~~I---~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 59 TQQFVIDGEA-G--RVIGMI---DGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 131 (386)
T ss_dssp EEEEEEETTT-T--EEEEEE---EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CEEEEEECCC-C--eEEEEE---ECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence 3678988743 1 112233 233333 49999999998886531100 000123569999999987643222111 0
Q ss_pred c--ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEE
Q 002209 241 Y--LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (953)
Q Consensus 241 ~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 318 (953)
. .......+.++|||++++++.. . ....+.+
T Consensus 132 r~~~g~~P~~~a~spDGk~lyVan~--------------------------------------~---------~~~~VsV 164 (386)
T 3sjl_D 132 RFLVGTYPWMTSLTPDGKTLLFYQF--------------------------------------S---------PAPAVGV 164 (386)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEEC--------------------------------------S---------SSCEEEE
T ss_pred ccccCCCCceEEEcCCCCEEEEEEc--------------------------------------C---------CCCeEEE
Confidence 0 0001447899999999997610 0 1246778
Q ss_pred EEc-CCce-eEeCCCC--------cccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcc
Q 002209 319 VSL-DGTV-KEIGPPA--------VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE 388 (953)
Q Consensus 319 ~~~-~g~~-~~l~~~~--------~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~ 388 (953)
+|+ +++. ..+..++ .-.-++.++||+++++..... +.+ + +... .+.. ..
T Consensus 165 ID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~------------g~v-~-~~~~----~~~~---~~ 223 (386)
T 3sjl_D 165 VDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTE------------GTP-E-ITHT----EVFH---PE 223 (386)
T ss_dssp EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSS------------SCC-E-EEEC----CCCS---CT
T ss_pred EECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCC------------CeE-E-Eeec----ceec---cc
Confidence 888 6643 3332211 111236778887665554211 122 0 1000 0000 00
Q ss_pred cCCccccccccCccceeec-cCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec-------------
Q 002209 389 DIPIAFNSVRKGMRSINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL------------- 454 (953)
Q Consensus 389 ~~p~~~~~~~~~~~~~~ws-pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~------------- 454 (953)
..|. ...+.|. +||+ ++|. +..+.++++|. .++..+.+...
T Consensus 224 ~~~~--------~~~~~~~~~dG~-~~~v-------------s~~g~V~v~d~---~~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 224 DEFL--------INHPAYSQKAGR-LVWP-------------TYTGKIHQIDL---SSGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp TSCB--------CSCCEEETTTTE-EEEE-------------BTTSEEEEEEC---TTSSCEECCCEESSCHHHHHTTEE
T ss_pred cccc--------cccceeEcCCCc-EEEE-------------eCCCEEEEEEC---CCCcceeecceecccccccccccc
Confidence 1111 1134674 7774 5555 33457999995 44443332111
Q ss_pred ccccCCeeeccCCceEEEEEecc------cCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 455 DLRYGGISWCDDSLALVYESWYK------TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 455 ~~~~~~~~~SpDg~~l~~~~~~~------~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
......+++++|+++|+.....+ ....++|++|+.++....+...... .++ +.+|+||+.++|..
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~---~~~------lavs~D~~~~ly~t 349 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE---IDS------INVSQDEKPLLYAL 349 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE---ECE------EEECSSSSCEEEEE
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC---cce------EEECCCCCeEEEEE
Confidence 11223478899999998875421 1235899999998632112212211 222 88999998666664
Q ss_pred eeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccC
Q 002209 529 KKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (953)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~ 571 (953)
+.. ...+.++|..+++...-....
T Consensus 350 n~~-------------------~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 350 STG-------------------DKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp ETT-------------------TTEEEEEETTTCCEEEEECCC
T ss_pred cCC-------------------CCeEEEEECCCCcEEEEecCC
Confidence 321 124899999998876655444
No 388
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.03 E-value=2.1e-08 Score=107.74 Aligned_cols=253 Identities=9% Similarity=0.038 Sum_probs=145.0
Q ss_pred CCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCc
Q 002209 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (953)
Q Consensus 111 ~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~ 190 (953)
...+.|+|||+.|+|+... . +.|+.|+. +| ..+.+.. + ...
T Consensus 47 ~egp~~~~~g~~l~~~d~~--------------------------~------~~i~~~~~--~g---~~~~~~~-~-~~~ 87 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLV--------------------------G------RRVLGWRE--DG---TVDVLLD-A-TAF 87 (305)
T ss_dssp EEEEEEEGGGTEEEEEETT--------------------------T------TEEEEEET--TS---CEEEEEE-S-CSC
T ss_pred ccCCeEeCCCCEEEEEECC--------------------------C------CEEEEEeC--CC---CEEEEeC-C-CCc
Confidence 3478999999998888653 0 25677775 23 2333332 1 235
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
...+.|+|||+.++... +...|++++.+ |+.+.+...........+..+++.|||+ |+++.+......
T Consensus 88 ~~gl~~d~dG~l~v~~~---------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~- 155 (305)
T 3dr2_A 88 TNGNAVDAQQRLVHCEH---------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRK- 155 (305)
T ss_dssp EEEEEECTTSCEEEEET---------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSC-
T ss_pred cceeeECCCCCEEEEEC---------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccc-
Confidence 67789999998554421 24589999987 5555554321111111145788999997 444311000000
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEE
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILI 348 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~ 348 (953)
..++. ..... .....||+++. +|+.+.+. . .....++|||||+.|++
T Consensus 156 ------------~~~~~------------~~~~~------~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv 204 (305)
T 3dr2_A 156 ------------PSQGC------------PADPE------LAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYV 204 (305)
T ss_dssp ------------GGGSC------------CCCCS------SSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEE
T ss_pred ------------ccccc------------ccccc------cCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEE
Confidence 00000 00000 02357999999 88877766 5 55567899999999887
Q ss_pred EEecCCccccccCCCCCcceEEEeccCceEE---EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR---ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~---~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
+..... ......|++++++++... .+.... ...+..+.+++||+ +|.
T Consensus 205 ~~~~~~-------~~~~~~i~~~~~~~~~l~~~~~~~~~~------------~~~pdgi~~d~~G~--lwv--------- 254 (305)
T 3dr2_A 205 SQTPEQ-------GHGSVEITAFAWRDGALHDRRHFASVP------------DGLPDGFCVDRGGW--LWS--------- 254 (305)
T ss_dssp EECCC----------CCCEEEEEEEETTEEEEEEEEECCS------------SSCCCSEEECTTSC--EEE---------
T ss_pred EecCCc-------CCCCCEEEEEEecCCCccCCeEEEECC------------CCCCCeEEECCCCC--EEE---------
Confidence 763210 001247999998754321 111110 02234688999997 333
Q ss_pred ccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcC
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~ 488 (953)
...+.|++++. +|.....+.... ....+.|++|++.|+++... .||.+++
T Consensus 255 ----~~~~gv~~~~~---~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 255 ----SSGTGVCVFDS---DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp ----CCSSEEEEECT---TSCEEEEEECSS-CCCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred ----ecCCcEEEECC---CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 12346888884 554444444333 46778999999998887642 5777654
No 389
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.03 E-value=9.5e-10 Score=115.60 Aligned_cols=197 Identities=13% Similarity=0.087 Sum_probs=111.7
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~ 749 (953)
.|.||++||+.... ..|.. +.. ...+|.|+.++.. |++.+..........+.|+.+.++.
T Consensus 21 ~~~lv~lhg~~~~~-----------~~~~~----~~~--l~~~~~v~~~d~~---G~~~~~~~~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 21 RKTLFMLPDGGGSA-----------FSYAS----LPR--LKSDTAVVGLNCP---YARDPENMNCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SEEEEEECCTTCCG-----------GGGTT----SCC--CSSSEEEEEEECT---TTTCGGGCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCH-----------HHHHH----HHh--cCCCCEEEEEECC---CCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 57889999964211 11221 122 3678999996654 4554433333456667776666655
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCcccEEEEcccCCCCCCCCc--------------Cc-------cc
Q 002209 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLA---HAPHLFCCGIARSGAYNRTLTPF--------------GF-------QN 805 (953)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~~~~d~~~~~~--------------~~-------~~ 805 (953)
+. ...++.++||||||.+++.++. ..|++++++|++++......... +. ..
T Consensus 81 ~~-----~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
T 3ils_A 81 RQ-----PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGS 155 (265)
T ss_dssp HC-----SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSC
T ss_pred hC-----CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCC
Confidence 42 1258999999999999999998 67788999988876432111110 00 00
Q ss_pred ccchhh--h-hHHHHH---hcCcccccCCCCCcEE-EEEeCC---CCCCCC------------chHHHHHHHHHHHhCCC
Q 002209 806 EDRTLW--E-ATSTYV---EMSPFMSANKLKKPIL-LVHGEE---DNNSGT------------LTMQSDRFFNALKGHGA 863 (953)
Q Consensus 806 ~~~~~~--~-~~~~~~---~~sp~~~~~~i~~P~L-i~~G~~---D~~v~~------------~~~~~~~~~~~l~~~g~ 863 (953)
.....+ . -...+. .+.+ .....+++|++ +++|++ |..++. .......+.+.+. +.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~ 232 (265)
T 3ils_A 156 TEPPSYLIPHFTAVVDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP--GA 232 (265)
T ss_dssp SCCCTTHHHHHHHHHHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHST--TC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCC--cc
Confidence 000000 0 011111 1111 12346889977 999999 987720 0222233322221 13
Q ss_pred cEEEEEeCCCCccCC-CcccHHHHHHHHHHHH
Q 002209 864 LCRLVILPFESHGYA-ARESIMHVLWETDRWL 894 (953)
Q Consensus 864 ~~~~~~~~~~~H~~~-~~~~~~~~~~~i~~fl 894 (953)
++++++++|+||... ..+....+.+.|.+||
T Consensus 233 ~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 233 SFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp CEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred ceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 689999999999764 1345555655665554
No 390
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.00 E-value=5e-08 Score=104.71 Aligned_cols=228 Identities=10% Similarity=0.015 Sum_probs=122.3
Q ss_pred ceEEEEEcCCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCc
Q 002209 314 TQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPI 392 (953)
Q Consensus 314 ~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~ 392 (953)
..|++++.+|+.+.+... .....++++|||+.++.... ...|.+++.++. .+.+...... .
T Consensus 67 ~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~-------------~~~v~~~~~~g~-~~~~~~~~~~--~-- 128 (305)
T 3dr2_A 67 RRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHG-------------RRAITRSDADGQ-AHLLVGRYAG--K-- 128 (305)
T ss_dssp TEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETT-------------TTEEEEECTTSC-EEEEECEETT--E--
T ss_pred CEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECC-------------CCEEEEECCCCC-EEEEEeccCC--C--
Confidence 467888886665555444 56678899999985544321 136888888743 4444321100 0
Q ss_pred cccccccCccceeeccCCCCceEEEEeccCCC------cccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccC
Q 002209 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGD------AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDD 466 (953)
Q Consensus 393 ~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~------~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpD 466 (953)
....+..++++|||+ + |+++...+.. ..........||.++. ++++.+.+. .......++|+||
T Consensus 129 ----~~~~~~~i~~d~dG~-l-~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 129 ----RLNSPNDLIVARDGA-I-WFTDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp ----ECSCCCCEEECTTSC-E-EEECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEEEEEECTT
T ss_pred ----ccCCCCCEEECCCCC-E-EEeCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCcceEEcCC
Confidence 012345789999997 3 3322100000 0000012357899884 456666665 4444567899999
Q ss_pred CceEEEEEeccc--CceEEEEEcCCCCCC-CcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecC
Q 002209 467 SLALVYESWYKT--RRTRTWVISPGSKDV-APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (953)
Q Consensus 467 g~~l~~~~~~~~--~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~ 543 (953)
|+.|+++..... ...+|++++.+++.. ....+.+.......+ +.++++|+ |+...
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg------i~~d~~G~-lwv~~--------------- 256 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG------FCVDRGGW-LWSSS--------------- 256 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS------EEECTTSC-EEECC---------------
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe------EEECCCCC-EEEec---------------
Confidence 999888754320 113788888765310 111121111110011 56677776 22211
Q ss_pred CCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002209 544 GATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (953)
Q Consensus 544 ~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~ 616 (953)
...|++||.+++....+..... + ....|++|++.|+++... .+|.+++
T Consensus 257 -------~~gv~~~~~~g~~~~~~~~~~~------~-------~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 257 -------GTGVCVFDSDGQLLGHIPTPGT------A-------SNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp -------SSEEEEECTTSCEEEEEECSSC------C-------CEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred -------CCcEEEECCCCCEEEEEECCCc------e-------eEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 1138889986555554443321 1 124577888888776542 5777654
No 391
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.6e-08 Score=114.74 Aligned_cols=212 Identities=9% Similarity=0.024 Sum_probs=124.1
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccC--CCCCCc------ee
Q 002209 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFP--DGKLGQ------EI 180 (953)
Q Consensus 109 ~~~~~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~--~g~~~~------~~ 180 (953)
..+..++|+|||+.|+....+ +.|.+||+.. .+.... .+
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~d---------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~ 158 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKD---------------------------------GQIIVLKVNHYQQESEVKFLNCECIR 158 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETT---------------------------------SEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEEeCCCCEEEEEeCC---------------------------------CEEEEEEeccccCCceeeccccceeE
Confidence 357788999999999988875 3567887731 111000 01
Q ss_pred eeecCC--CCCcccceE--eccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCe
Q 002209 181 EIQGFP--DGAKLNFVT--WSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNST 256 (953)
Q Consensus 181 ~l~~~~--~~~~~~~~~--wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~ 256 (953)
.+...+ ....+.... |+|||+.|+... ....|.++|+.+++.......+. ....+..++|+|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~ 227 (437)
T 3gre_A 159 KINLKNFGKNEYAVRMRAFVNEEKSLLVALT---------NLSRVIIFDIRTLERLQIIENSP--RHGAVSSICIDEECC 227 (437)
T ss_dssp EEEGGGGSSCCCEEEEEEEECSSCEEEEEEE---------TTSEEEEEETTTCCEEEEEECCG--GGCCEEEEEECTTSC
T ss_pred EEEccCcccccCceEEEEEEcCCCCEEEEEe---------CCCeEEEEeCCCCeeeEEEccCC--CCCceEEEEECCCCC
Confidence 111001 111223333 678898888755 35689999998887654433210 111277899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeC-CC-C
Q 002209 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIG-PP-A 332 (953)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~-~~-~ 332 (953)
.|+... ..+.|.++|+ +++.. .+. .. .
T Consensus 228 ~l~s~~-------------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 228 VLILGT-------------------------------------------------TRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp EEEEEE-------------------------------------------------TTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred EEEEEc-------------------------------------------------CCCeEEEEEcCCccEEEEEecCCCC
Confidence 998761 2245777788 66543 332 22 4
Q ss_pred ccccc----ccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcc----cCCc-------cccc
Q 002209 333 VYTSL----DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE----DIPI-------AFNS 396 (953)
Q Consensus 333 ~~~~~----~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~----~~p~-------~~~~ 396 (953)
.+..+ .|+|||+.|+..+.+ +.|.+||+..+. .+.+....... ..|. .+.+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSK-------------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTT-------------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred ceEEEEeccccCCCccEEEEEcCC-------------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 56666 788899888877633 389999998554 34444322110 0010 0111
Q ss_pred --cccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEec
Q 002209 397 --VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQA 440 (953)
Q Consensus 397 --~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~ 440 (953)
....+..++|+ |++.++.. +..+.|.+|++
T Consensus 326 ~~~~~~v~~l~~~-~~~~l~s~-------------~~d~~i~~wd~ 357 (437)
T 3gre_A 326 IRSLNALSTISVS-NDKILLTD-------------EATSSIVMFSL 357 (437)
T ss_dssp CCSGGGGCCEEEE-TTEEEEEE-------------GGGTEEEEEET
T ss_pred cccCCceEEEEEC-CceEEEec-------------CCCCeEEEEEC
Confidence 23345678888 66544433 44568888886
No 392
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.98 E-value=5.4e-08 Score=104.01 Aligned_cols=239 Identities=12% Similarity=0.016 Sum_probs=140.7
Q ss_pred CceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCccc
Q 002209 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (953)
Q Consensus 113 ~~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~ 192 (953)
.|.|+|++..|.++... . ..|+.++..+ +..+.+. .+ ..+.
T Consensus 17 gp~w~~~~~~l~~~d~~--------------------------~------~~i~~~d~~~----~~~~~~~-~~--~~~~ 57 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIP--------------------------A------KKVCRWDSFT----KQVQRVT-MD--APVS 57 (297)
T ss_dssp EEEEETTTTEEEEEETT--------------------------T------TEEEEEETTT----CCEEEEE-CS--SCEE
T ss_pred CCeEECCCCEEEEEECC--------------------------C------CEEEEEECCC----CcEEEEe-CC--CceE
Confidence 68899998888887652 1 2578888742 3322222 22 3577
Q ss_pred ceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002209 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (953)
Q Consensus 193 ~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 272 (953)
.+.|+|||+ |+... ...|+++|.++++.+.+...........+..++++|||+ |+++........
T Consensus 58 ~i~~~~dG~-l~v~~----------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~--- 122 (297)
T 3g4e_A 58 SVALRQSGG-YVATI----------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAP--- 122 (297)
T ss_dssp EEEEBTTSS-EEEEE----------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBT---
T ss_pred EEEECCCCC-EEEEE----------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCccccc---
Confidence 889999999 43322 347999999988877665432211111245788999998 444411100000
Q ss_pred CCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCC-CcccccccCCCCcEEEEEEe
Q 002209 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSI 351 (953)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~ 351 (953)
.... .....||+++.+|+...+... .....++|||||+.|+++..
T Consensus 123 ---------------------------~~~~-------~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 123 ---------------------------AVLE-------RHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp ---------------------------TBCC-------TTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred ---------------------------cccc-------CCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecC
Confidence 0000 033578888876666555444 55668899999999877763
Q ss_pred cCCccccccCCCCCcceEEEecc--CceE---EEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 352 HRPYSFIVPCGRFPRQVGVWTTD--GIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~~~d~~--g~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
. .+.|++++++ ++.. +.+...+.. ...+..+++++||+ |+.. .
T Consensus 169 ~------------~~~i~~~~~d~~~G~~~~~~~~~~~~~~----------~~~p~g~~~d~~G~-lwva-~-------- 216 (297)
T 3g4e_A 169 L------------SYSVDAFDYDLQTGQISNRRSVYKLEKE----------EQIPDGMCIDAEGK-LWVA-C-------- 216 (297)
T ss_dssp G------------GTEEEEEEECTTTCCEEEEEEEEECCGG----------GCEEEEEEEBTTSC-EEEE-E--------
T ss_pred C------------CCcEEEEeccCCCCcccCcEEEEECCCC----------CCCCCeeEECCCCC-EEEE-E--------
Confidence 2 2378899874 3332 222221110 12335688999995 3222 1
Q ss_pred cccccCCeEEEEecCCCCCCCceEEeecccccCCeeec-cCCceEEEEEec
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWC-DDSLALVYESWY 476 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~S-pDg~~l~~~~~~ 476 (953)
...+.|++++. .+|.....+..+...+.+++|+ ||++.|+++...
T Consensus 217 ---~~~~~v~~~d~--~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 217 ---YNGGRVIRLDP--VTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ---ETTTEEEEECT--TTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred ---cCCCEEEEEcC--CCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 12346888884 2233333444444566788998 899988877643
No 393
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.97 E-value=5e-08 Score=104.26 Aligned_cols=233 Identities=9% Similarity=0.022 Sum_probs=135.8
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
...|.|+|+++.|+|+.. ....|+++++++++...+.. +.. +..+++++||++++ .
T Consensus 15 ~Egp~w~~~~~~l~~~d~--------~~~~i~~~d~~~~~~~~~~~-~~~-----~~~i~~~~dG~l~v-~--------- 70 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDI--------PAKKVCRWDSFTKQVQRVTM-DAP-----VSSVALRQSGGYVA-T--------- 70 (297)
T ss_dssp EEEEEEETTTTEEEEEET--------TTTEEEEEETTTCCEEEEEC-SSC-----EEEEEEBTTSSEEE-E---------
T ss_pred ccCCeEECCCCEEEEEEC--------CCCEEEEEECCCCcEEEEeC-CCc-----eEEEEECCCCCEEE-E---------
Confidence 346999999989988642 35689999999887654422 221 66889999999444 3
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC------CcccccccCCCC
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPDE 343 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~------~~~~~~~~SpDG 343 (953)
....|++++. +|+.+.+... .....++++|||
T Consensus 71 -----------------------------------------~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG 109 (297)
T 3g4e_A 71 -----------------------------------------IGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG 109 (297)
T ss_dssp -----------------------------------------ETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS
T ss_pred -----------------------------------------ECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC
Confidence 1135778888 7766655321 235678899999
Q ss_pred cEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
+ |.+.......... ........|+.++.++......... .....++|+|||+.+++. +
T Consensus 110 ~-l~~~~~~~~~~~~-~~~~~~~~l~~~d~~g~~~~~~~~~--------------~~pngi~~spdg~~lyv~-~----- 167 (297)
T 3g4e_A 110 R-YFAGTMAEETAPA-VLERHQGALYSLFPDHHVKKYFDQV--------------DISNGLDWSLDHKIFYYI-D----- 167 (297)
T ss_dssp C-EEEEEEECCSBTT-BCCTTCEEEEEECTTSCEEEEEEEE--------------SBEEEEEECTTSCEEEEE-E-----
T ss_pred C-EEEecCCcccccc-cccCCCcEEEEEECCCCEEEEeecc--------------ccccceEEcCCCCEEEEe-c-----
Confidence 8 4444432210000 0001123677777665433222111 123468999999876554 2
Q ss_pred CcccccccCCeEEEEecCCCCCCCc---eEEee---cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEE
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQGEGP---EILHK---LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g~~~---~~l~~---~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (953)
...+.|+++++++.+ +.. +.+.. ......++++++||+ |+.+.+.. . +|++++++++ +...
T Consensus 168 ------~~~~~i~~~~~d~~~-G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~-~--~v~~~d~~tG--~~~~ 234 (297)
T 3g4e_A 168 ------SLSYSVDAFDYDLQT-GQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNG-G--RVIRLDPVTG--KRLQ 234 (297)
T ss_dssp ------GGGTEEEEEEECTTT-CCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETT-T--EEEEECTTTC--CEEE
T ss_pred ------CCCCcEEEEeccCCC-CcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCC-C--EEEEEcCCCc--eEEE
Confidence 224578888752223 332 22222 223456789999995 55554433 2 6999999865 3222
Q ss_pred eecCCCccccCCCCCCCeEec-cCCCEEEEEee
Q 002209 498 LFDRSSEDVYSDPGSPMMRRT-STGTYVIAKIK 529 (953)
Q Consensus 498 ~~~~~~~~~~~~~~~p~~~~S-pDG~~l~~~~~ 529 (953)
....+...+.+ +.|+ ||+++|+....
T Consensus 235 ~i~~p~~~~t~------~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TVKLPVDKTTS------CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEECSSSBEEE------EEEESGGGCEEEEEEB
T ss_pred EEECCCCCceE------EEEeCCCCCEEEEEcC
Confidence 22222222222 6787 88888877764
No 394
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=98.96 E-value=1.1e-08 Score=114.00 Aligned_cols=212 Identities=11% Similarity=0.011 Sum_probs=124.7
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH------cCcEEEEcCCC
Q 002209 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA------RGFAILGGPTT 721 (953)
Q Consensus 648 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~------~G~~V~~~~~~ 721 (953)
+|..|+.....+.. ...|.||++||++... ..+. .....|++ .||.|+++
T Consensus 93 ~g~~i~~~~~~~~~------~~~~pllllHG~~~s~--------------~~~~-~~~~~L~~~~~~~~~gf~vv~~--- 148 (408)
T 3g02_A 93 EGLTIHFAALFSER------EDAVPIALLHGWPGSF--------------VEFY-PILQLFREEYTPETLPFHLVVP--- 148 (408)
T ss_dssp TTEEEEEEEECCSC------TTCEEEEEECCSSCCG--------------GGGH-HHHHHHHHHCCTTTCCEEEEEE---
T ss_pred CCEEEEEEEecCCC------CCCCeEEEECCCCCcH--------------HHHH-HHHHHHhcccccccCceEEEEE---
Confidence 89999988876532 1256789999975221 1111 23445666 58999994
Q ss_pred CCCCCCChhhhh----hhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCC
Q 002209 722 PIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPS-KIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (953)
Q Consensus 722 ~~~G~G~~~~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~ 796 (953)
+..|+|.|.... ........|+.+.++.+ + .+ ++.++||||||.+++.++.++|+++...+.++++...
T Consensus 149 DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~l---g---~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~ 222 (408)
T 3g02_A 149 SLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDL---G---FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAP 222 (408)
T ss_dssp CCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHT---T---CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCC
Confidence 556777775432 22445555555554432 2 33 8999999999999999999997755555544433221
Q ss_pred CCCC--cCcccc---------------cc----------h---------------------hhhh-----H---------
Q 002209 797 TLTP--FGFQNE---------------DR----------T---------------------LWEA-----T--------- 814 (953)
Q Consensus 797 ~~~~--~~~~~~---------------~~----------~---------------------~~~~-----~--------- 814 (953)
.... ..+... .. + .|.+ .
T Consensus 223 ~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y 302 (408)
T 3g02_A 223 PEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLY 302 (408)
T ss_dssp TTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHH
Confidence 1000 000000 00 0 0000 0
Q ss_pred ----------HHHHhc-Cc--cc-------ccCCCCCcEEEEEeCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 002209 815 ----------STYVEM-SP--FM-------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFES 874 (953)
Q Consensus 815 ----------~~~~~~-sp--~~-------~~~~i~~P~Li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 874 (953)
..|.+. .. .. .+..+++|+++++|..|...+ +.. +.+.. ..-+.+..++++|
T Consensus 303 ~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~--p~~---~~~~~---~~~~~~~~~~~gG 374 (408)
T 3g02_A 303 WLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPV--PRS---WIATT---GNLVFFRDHAEGG 374 (408)
T ss_dssp HHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCC--CHH---HHGGG---EEEEEEEECSSCB
T ss_pred HhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccC--cHH---HHHhc---CCeeEEEECCCCc
Confidence 000000 00 00 234568899999999997654 442 22222 2236788999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHhc
Q 002209 875 HGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
|.. ..+..+.+.+.+.+||.+.-
T Consensus 375 Hf~-~lE~Pe~~~~~l~~fl~~~~ 397 (408)
T 3g02_A 375 HFA-ALERPRELKTDLTAFVEQVW 397 (408)
T ss_dssp SCH-HHHCHHHHHHHHHHHHHHHC
T ss_pred Cch-hhhCHHHHHHHHHHHHHHHH
Confidence 975 46788899999999998754
No 395
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.96 E-value=2.4e-09 Score=114.93 Aligned_cols=210 Identities=13% Similarity=-0.054 Sum_probs=119.2
Q ss_pred CcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCC
Q 002209 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGD 728 (953)
Q Consensus 649 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~ 728 (953)
+..+...++.|.++..+. .+.||++||..... .. .+.......|+++||.|+.+++ .|+|.
T Consensus 13 ~~~l~~~i~~p~~~~~~~---~~~VvllHG~~~~~-----------~~--~~~~~l~~~L~~~G~~v~~~d~---~g~g~ 73 (317)
T 1tca_A 13 KSVLDAGLTCQGASPSSV---SKPILLVPGTGTTG-----------PQ--SFDSNWIPLSTQLGYTPCWISP---PPFML 73 (317)
T ss_dssp HHHHHHTEEETTBCTTSC---SSEEEEECCTTCCH-----------HH--HHTTTHHHHHHTTTCEEEEECC---TTTTC
T ss_pred HHHHhheeeCCCCCCCCC---CCeEEEECCCCCCc-----------ch--hhHHHHHHHHHhCCCEEEEECC---CCCCC
Confidence 344566678887764322 45689999953110 00 0111345667788999999655 45554
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CcccEEEEcccCCCCCCCC-----
Q 002209 729 EEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGAYNRTLTP----- 800 (953)
Q Consensus 729 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~~d~~~~~----- 800 (953)
+. ......++.+.++++.+... .+++.|+||||||.++.+++.+.| ++++++|++++........
T Consensus 74 ~~-----~~~~~~~l~~~i~~~~~~~g--~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~ 146 (317)
T 1tca_A 74 ND-----TQVNTEYMVNAITALYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDA 146 (317)
T ss_dssp SC-----HHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHH
T ss_pred Cc-----HHHHHHHHHHHHHHHHHHhC--CCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhh
Confidence 32 12345677777887776532 368999999999999999988775 7899999999865422110
Q ss_pred cCcccc----cchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCCchHH--HHHHHHHHHhCCCcEEEEEe----
Q 002209 801 FGFQNE----DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ--SDRFFNALKGHGALCRLVIL---- 870 (953)
Q Consensus 801 ~~~~~~----~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~~~~~--~~~~~~~l~~~g~~~~~~~~---- 870 (953)
+.+... ......-...+.... ....+.|+++++|..|.+|+ +.. +......+. +. +.+..
T Consensus 147 ~~~~~~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~--p~~~~g~~~~~~l~--~a--~~~~~~~~~ 216 (317)
T 1tca_A 147 LAVSAPSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQ--PQVSNSPLDSSYLF--NG--KNVQAQAVC 216 (317)
T ss_dssp TTCBCHHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSC--CCCSSSTTSTTCCB--TS--EEEEHHHHH
T ss_pred hhhcCchHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeEC--Cccccccchhhhcc--CC--ccEEeeecc
Confidence 000000 000000011111110 01246899999999999997 554 111111111 11 22222
Q ss_pred ---CCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 871 ---PFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 871 ---~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
++.+|... ..+ ..++..+.+||+.
T Consensus 217 ~~~~~~gH~~~-l~~-p~~~~~v~~~L~~ 243 (317)
T 1tca_A 217 GPLFVIDHAGS-LTS-QFSYVVGRSALRS 243 (317)
T ss_dssp CTTCCCCTTHH-HHB-HHHHHHHHHHHHC
T ss_pred CCCCccCcccc-cCC-HHHHHHHHHHhcC
Confidence 57789642 222 3456777888764
No 396
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.94 E-value=1.5e-07 Score=102.07 Aligned_cols=227 Identities=9% Similarity=0.020 Sum_probs=133.7
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
...|.|+||++.|+++.. ....|++++.++++.+.+.. +.. +..+.|+|||++++..
T Consensus 51 ~egp~~~~~~~~l~~~d~--------~~~~i~~~d~~~~~~~~~~~-~~~-----v~~i~~~~dg~l~v~~--------- 107 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNI--------LERELHELHLASGRKTVHAL-PFM-----GSALAKISDSKQLIAS--------- 107 (326)
T ss_dssp EEEEEEETTTTEEEEEEG--------GGTEEEEEETTTTEEEEEEC-SSC-----EEEEEEEETTEEEEEE---------
T ss_pred CcCCeEeCCCCEEEEEEC--------CCCEEEEEECCCCcEEEEEC-CCc-----ceEEEEeCCCeEEEEE---------
Confidence 356999999988988643 24689999999887665432 221 6688899999877643
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC------CcccccccCCCC
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPDE 343 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~------~~~~~~~~SpDG 343 (953)
...|++++. +|+.+.+... ..+..+.++|||
T Consensus 108 ------------------------------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G 145 (326)
T 2ghs_A 108 ------------------------------------------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG 145 (326)
T ss_dssp ------------------------------------------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS
T ss_pred ------------------------------------------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC
Confidence 124888888 7876665432 235678999999
Q ss_pred cEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCC
Q 002209 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (953)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~ 423 (953)
+. ++....... ......|+.++ + +..+.+.... .....++|+|||+.+++. +
T Consensus 146 ~l-~v~~~~~~~------~~~~~~l~~~~-~-g~~~~~~~~~-------------~~~~~i~~s~dg~~lyv~-~----- 197 (326)
T 2ghs_A 146 AL-WIGTMGRKA------ETGAGSIYHVA-K-GKVTKLFADI-------------SIPNSICFSPDGTTGYFV-D----- 197 (326)
T ss_dssp CE-EEEEEETTC------CTTCEEEEEEE-T-TEEEEEEEEE-------------SSEEEEEECTTSCEEEEE-E-----
T ss_pred CE-EEEeCCCcC------CCCceEEEEEe-C-CcEEEeeCCC-------------cccCCeEEcCCCCEEEEE-E-----
Confidence 84 444322100 01123688887 4 4444443210 122468999999877665 1
Q ss_pred CcccccccCCeEEEEecCCCCC-C--CceEEee---cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEE
Q 002209 424 DAKVEVTPRDIIYTQQAEPVQG-E--GPEILHK---LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (953)
Q Consensus 424 ~~~~~~~~~~~l~~~d~~~~~g-~--~~~~l~~---~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 497 (953)
...+.|+++++++.+| . ..+.+.. ......++.+++||+ |+++.... ..|+++++++ +...
T Consensus 198 ------~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~---~~v~~~d~~g---~~~~ 264 (326)
T 2ghs_A 198 ------TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGE---GAVDRYDTDG---NHIA 264 (326)
T ss_dssp ------TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETT---TEEEEECTTC---CEEE
T ss_pred ------CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCC---CEEEEECCCC---CEEE
Confidence 2245788998621122 1 1223322 123345688999996 44443322 2688999854 2222
Q ss_pred eecCCCccccCCCCCCCeEec-cCCCEEEEEee
Q 002209 498 LFDRSSEDVYSDPGSPMMRRT-STGTYVIAKIK 529 (953)
Q Consensus 498 ~~~~~~~~~~~~~~~p~~~~S-pDG~~l~~~~~ 529 (953)
....+...+.+ ++|+ +|++.|+....
T Consensus 265 ~i~~~~~~~~~------~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 265 RYEVPGKQTTC------PAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEECSCSBEEE------EEEESTTSCEEEEEEB
T ss_pred EEECCCCCcEE------EEEecCCCCEEEEEec
Confidence 22222222222 6787 88888766653
No 397
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=98.91 E-value=1.6e-09 Score=125.27 Aligned_cols=132 Identities=19% Similarity=0.177 Sum_probs=90.4
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCcEEEEcCCC-CC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTT-PI 723 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~-~~ 723 (953)
+.|.. ...+|.|.....+ .++|+||++|||.+..+.. ..+. . ..|+ ..|++|+.++|+ +.
T Consensus 95 ~edcl--~lnv~~P~~~~~~--~~~Pv~v~iHGG~~~~g~~--------~~~~---~---~~la~~~g~vvv~~nYRlg~ 156 (542)
T 2h7c_A 95 SEDCL--YLNIYTPADLTKK--NRLPVMVWIHGGGLMVGAA--------STYD---G---LALAAHENVVVVTIQYRLGI 156 (542)
T ss_dssp ESCCC--EEEEEECSCTTSC--CCEEEEEEECCSTTTSCCS--------TTSC---C---HHHHHHHTCEEEEECCCCHH
T ss_pred CCCCc--EEEEEECCCCCCC--CCCCEEEEECCCcccCCCc--------cccC---H---HHHHhcCCEEEEecCCCCcc
Confidence 45654 4568889764332 3599999999987554322 1121 1 1345 489999998887 33
Q ss_pred CCCCChhhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCcccEEEEcccCCC
Q 002209 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYN 795 (953)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~d 795 (953)
.|++............+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++.. .+.+|+++|+.+|...
T Consensus 157 ~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 157 WGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 333322111111234478999999999875 34799999999999999999999886 3578999999998754
No 398
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.86 E-value=4.7e-08 Score=109.15 Aligned_cols=240 Identities=10% Similarity=0.054 Sum_probs=116.8
Q ss_pred cceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceee--cccCCCccccccccceEEec--------CCeEEEEE
Q 002209 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP--LFQSPDIYLNAIFDNFVWVN--------NSTLLVCT 261 (953)
Q Consensus 192 ~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~--lt~~~~~~~~~~~~~~~wsp--------Dg~~l~~~ 261 (953)
....++++++.|+... . ...|.++|+++++... +.. ...++...+..++|+| ||+.|+..
T Consensus 93 ~~~~~~~~~~~las~~-------~--d~~v~lw~~~~~~~~~~~~~~-~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVC-------Q--DNTVRLIITKNETIITQHVLG-GKSGHHNFVNDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp ----CCEEEEEEEEEE-------T--TSCEEEEEEETTEEEEEEEEC-TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE
T ss_pred ceeecCCCCCEEEEEe-------C--CCcEEEEECCCCccceeeeec-ccCCCCCceEEEEEccccccccCCCCCEEEEE
Confidence 3345667777777754 2 4456666666665422 111 0011222378999998 89988866
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CC-ceeEeCCC-Ccccccc
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVKEIGPP-AVYTSLD 338 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g-~~~~l~~~-~~~~~~~ 338 (953)
. ....+.++|+ ++ ....+... ..+.+++
T Consensus 163 s-------------------------------------------------~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~ 193 (393)
T 4gq1_A 163 G-------------------------------------------------DDCTLIIWRLTDEGPILAGYPLSSPGISVQ 193 (393)
T ss_dssp E-------------------------------------------------TTSEEEEEEEETTEEEEEEEECSSCEEEEE
T ss_pred E-------------------------------------------------CCCeEEEEECCCCceeeeecCCCCCcEEEE
Confidence 1 1134555666 44 33333333 6778899
Q ss_pred cCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCccc--------CCc----cccccccCcccee
Q 002209 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAED--------IPI----AFNSVRKGMRSIN 405 (953)
Q Consensus 339 ~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~--------~p~----~~~~~~~~~~~~~ 405 (953)
|+|++..++++... .+.|.+||+..+... .+........ .+. ...+....+..+.
T Consensus 194 ~~p~~~~~l~~~~~------------d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 194 FRPSNPNQLIVGER------------NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp EETTEEEEEEEEET------------TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred ECCCCCceEEecCC------------CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence 99999754444322 248999999854322 2111110000 000 0112233455677
Q ss_pred ec-cCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccc------------------cCCeeecc-
Q 002209 406 WR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLR------------------YGGISWCD- 465 (953)
Q Consensus 406 ws-pDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~------------------~~~~~~Sp- 465 (953)
|+ |||+.|+-. .....+.+||+ ..+.....+...... .....|+|
T Consensus 262 ~~~~dg~~l~s~-------------s~d~~i~vwd~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 262 WIGSDGSGILAM-------------CKSGAWLRWNL--FANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp EETTTTCEEEEE-------------CTTSEEEEEEC---------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eecCCCCEEEEE-------------eCCCCEEEEEC--ccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 76 899876654 34556777775 222211222111111 11223443
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
.++.++.+...+ + .|+++|..++. ...... .....+.. ++|||||++|+...
T Consensus 327 ~~~~~~~sgs~D-g--~V~lwd~~~~~-~~~~~~-~~~~~V~s------vafspdG~~LA~as 378 (393)
T 4gq1_A 327 YMDYFATAHSQH-G--LIQLINTYEKD-SNSIPI-QLGMPIVD------FCWHQDGSHLAIAT 378 (393)
T ss_dssp CTTEEEEEETTT-T--EEEEEETTCTT-CCEEEE-ECSSCEEE------EEECTTSSEEEEEE
T ss_pred CCCEEEEEECCC-C--EEEEEECCCCc-EEEEec-CCCCcEEE------EEEcCCCCEEEEEe
Confidence 334444433322 2 56666776652 222222 22223333 89999999999876
No 399
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.85 E-value=2.4e-07 Score=105.01 Aligned_cols=220 Identities=18% Similarity=0.189 Sum_probs=131.0
Q ss_pred ceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCCCCCcccc
Q 002209 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (953)
Q Consensus 114 ~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~ 193 (953)
..+++||++|+....+ +.|.+||+.+ + .....+.++ ...+..
T Consensus 137 ~~~~~d~~~l~~g~~d---------------------------------g~i~iwd~~~-~--~~~~~~~~h--~~~v~~ 178 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD---------------------------------NTIKIWDKNT-L--ECKRILTGH--TGSVLC 178 (435)
T ss_dssp EEEECCSSEEEEEESS---------------------------------SCEEEEESSS-C--CEEEEECCC--SSCEEE
T ss_pred EEEEECCCEEEEEeCC---------------------------------CeEEEEeCCC-C--eEEEEEcCC--CCcEEE
Confidence 3678899999888775 3689999853 2 222333332 235666
Q ss_pred eEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCC
Q 002209 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (953)
Q Consensus 194 ~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 273 (953)
..| ||+.|+... .+..|.++|+++++........... +..+.|++ ..|+...
T Consensus 179 l~~--~~~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~l~~~~--~~l~s~s----------- 230 (435)
T 1p22_A 179 LQY--DERVIITGS---------SDSTVRVWDVNTGEMLNTLIHHCEA----VLHLRFNN--GMMVTCS----------- 230 (435)
T ss_dssp EEC--CSSEEEEEE---------TTSCEEEEESSSCCEEEEECCCCSC----EEEEECCT--TEEEEEE-----------
T ss_pred EEE--CCCEEEEEc---------CCCeEEEEECCCCcEEEEEcCCCCc----EEEEEEcC--CEEEEee-----------
Confidence 766 888887754 3567888899888765443322222 66777763 3555441
Q ss_pred CCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce----eEeCCC-CcccccccCCCCcEEE
Q 002209 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV----KEIGPP-AVYTSLDPSPDEKYIL 347 (953)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~----~~l~~~-~~~~~~~~SpDG~~l~ 347 (953)
..+.|.++|+ ++.. ..+... ..+..+.| ||++|+
T Consensus 231 --------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 270 (435)
T 1p22_A 231 --------------------------------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIV 270 (435)
T ss_dssp --------------------------------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEE
T ss_pred --------------------------------------CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEE
Confidence 2245667777 5532 233333 56666666 899998
Q ss_pred EEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
..+.++ .|.+||+..++ ...+..+. ..+..+.| +++.++..
T Consensus 271 s~~~dg-------------~i~vwd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~g---------- 312 (435)
T 1p22_A 271 SASGDR-------------TIKVWNTSTCEFVRTLNGHK-------------RGIACLQY--RDRLVVSG---------- 312 (435)
T ss_dssp EEETTS-------------EEEEEETTTCCEEEEEECCS-------------SCEEEEEE--ETTEEEEE----------
T ss_pred EEeCCC-------------eEEEEECCcCcEEEEEcCCC-------------CcEEEEEe--CCCEEEEE----------
Confidence 887443 89999998554 33343321 22334555 45544443
Q ss_pred cccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEE
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~ 486 (953)
+..+.|.+||+ .++.....+..+...+..+.| |++.|+.++.++. .++|.+
T Consensus 313 ---~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~--i~vwd~ 363 (435)
T 1p22_A 313 ---SSDNTIRLWDI--ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK--IKVWDL 363 (435)
T ss_dssp ---ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC--EEEEEH
T ss_pred ---eCCCeEEEEEC--CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc--EEEEEC
Confidence 34567899996 233333345555555666777 8888887765432 355544
No 400
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=98.85 E-value=3.8e-09 Score=120.80 Aligned_cols=132 Identities=20% Similarity=0.183 Sum_probs=90.3
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcC-cEEEEcCCCC-C
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG-FAILGGPTTP-I 723 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G-~~V~~~~~~~-~ 723 (953)
+.|.. ...+|.|.. . ..++|+||++|||.+..+... ... .....|+++| ++|+.++|+- .
T Consensus 81 ~edcl--~l~v~~P~~--~--~~~~Pviv~iHGGg~~~g~~~--------~~~----~~~~~la~~~~~vvv~~nYRlg~ 142 (498)
T 2ogt_A 81 SEDGL--YLNIWSPAA--D--GKKRPVLFWIHGGAFLFGSGS--------SPW----YDGTAFAKHGDVVVVTINYRMNV 142 (498)
T ss_dssp BSCCC--EEEEEESCS--S--SCCEEEEEEECCSTTTSCCTT--------CGG----GCCHHHHHHHTCEEEEECCCCHH
T ss_pred CCCCc--EEEEEecCC--C--CCCCcEEEEEcCCccCCCCCC--------CCc----CCHHHHHhCCCEEEEeCCCcCch
Confidence 45554 446778862 2 235999999999865433221 110 1124667766 9999988872 2
Q ss_pred CCCCChhh-----hhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--CCcccEEEEcccC
Q 002209 724 IGEGDEEA-----NDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGA 793 (953)
Q Consensus 724 ~G~G~~~~-----~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~ 793 (953)
.|++.... ....+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++... ..+|+++|+.+|.
T Consensus 143 ~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 222 (498)
T 2ogt_A 143 FGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGS 222 (498)
T ss_dssp HHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCC
T ss_pred hhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCC
Confidence 24333211 1223456789999999999876 236899999999999999999888753 3579999999997
Q ss_pred CC
Q 002209 794 YN 795 (953)
Q Consensus 794 ~d 795 (953)
..
T Consensus 223 ~~ 224 (498)
T 2ogt_A 223 GS 224 (498)
T ss_dssp TT
T ss_pred cc
Confidence 65
No 401
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.84 E-value=3.8e-09 Score=109.23 Aligned_cols=169 Identities=14% Similarity=0.137 Sum_probs=89.8
Q ss_pred HcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEEEeChHHHHHHHHHHh------CCC
Q 002209 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVA-HPSKIAVGGHSYGAFMTANLLAH------APH 782 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~-d~~~i~l~G~S~GG~~a~~~a~~------~p~ 782 (953)
+.+|.|++ .+..|+|.+... ...|+.+.++.+.+.-.+ ..+++.|+||||||.+|+.+|.+ +|+
T Consensus 37 ~~~~~vi~---~Dl~GhG~S~~~------~~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~ 107 (242)
T 2k2q_B 37 QGECEMLA---AEPPGHGTNQTS------AIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQ 107 (242)
T ss_dssp CCSCCCEE---EECCSSCCSCCC------TTTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSC
T ss_pred CCCeEEEE---EeCCCCCCCCCC------CcCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCC
Confidence 45799999 455788877432 123445555544432112 12589999999999999999986 566
Q ss_pred cccEEEEcccCCCCCC-CCc----------Ccccccchhhhh-----------HHHHH---hcCcccccCCCCCcEEEEE
Q 002209 783 LFCCGIARSGAYNRTL-TPF----------GFQNEDRTLWEA-----------TSTYV---EMSPFMSANKLKKPILLVH 837 (953)
Q Consensus 783 ~~~a~v~~~~~~d~~~-~~~----------~~~~~~~~~~~~-----------~~~~~---~~sp~~~~~~i~~P~Li~~ 837 (953)
.+-......+...... ... ...........+ ...+. .+.. ..+.++++|+|+++
T Consensus 108 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~ 186 (242)
T 2k2q_B 108 AVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFN 186 (242)
T ss_dssp SEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEE
T ss_pred EEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEe
Confidence 5321111111111000 000 000000000000 01111 1111 12567899999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002209 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (953)
|++|..++ .....+ +..-...+++++++ ||... .+..+.+.+.+.+||.+.
T Consensus 187 G~~D~~~~---~~~~~~----~~~~~~~~~~~~~~-gH~~~-~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 187 GLDDKKCI---RDAEGW----KKWAKDITFHQFDG-GHMFL-LSQTEEVAERIFAILNQH 237 (242)
T ss_dssp ECSSCCHH---HHHHHH----HTTCCCSEEEEEEC-CCSHH-HHHCHHHHHHHHHHHHTT
T ss_pred eCCCCcCH---HHHHHH----HHHhcCCeEEEEeC-CceeE-cCCHHHHHHHHHHHhhcc
Confidence 99998743 333332 22212234777886 99753 455567788888888653
No 402
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.83 E-value=3.4e-08 Score=104.01 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=56.5
Q ss_pred HHHHHHHc--CcEEEEcCCCCCCCCCChhhh-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 002209 704 SVLLWLAR--GFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA 780 (953)
Q Consensus 704 ~~~~la~~--G~~V~~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 780 (953)
....|++. ||.|+++ +. |+|.+... ..+......++...++.+...... .+++.++||||||.++..++.++
T Consensus 27 ~~~~L~~~~~g~~v~~~---d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~lvGhSmGG~ia~~~a~~~ 101 (279)
T 1ei9_A 27 IKKMVEKKIPGIHVLSL---EI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL-QQGYNAMGFSQGGQFLRAVAQRC 101 (279)
T ss_dssp HHHHHHHHSTTCCEEEC---CC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG-TTCEEEEEETTHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCcEEEEE---Ee-CCCCccccccccccCHHHHHHHHHHHHHhhhhc-cCCEEEEEECHHHHHHHHHHHHc
Confidence 44556654 8899994 43 77765321 122222334444445555432212 26899999999999999999999
Q ss_pred CC-cccEEEEcccCC
Q 002209 781 PH-LFCCGIARSGAY 794 (953)
Q Consensus 781 p~-~~~a~v~~~~~~ 794 (953)
|+ .++.+|++++..
T Consensus 102 ~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 102 PSPPMVNLISVGGQH 116 (279)
T ss_dssp CSSCEEEEEEESCCT
T ss_pred CCcccceEEEecCcc
Confidence 98 499999887643
No 403
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.81 E-value=2.8e-09 Score=123.28 Aligned_cols=132 Identities=19% Similarity=0.196 Sum_probs=88.6
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCC-CC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTT-PI 723 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~-~~ 723 (953)
+.|... ..+|.|... + +.++|+||++|||.+..+..... .+ ....|++ .|++|+.++|+ +.
T Consensus 93 ~edcl~--l~v~~P~~~-~--~~~~Pviv~iHGGg~~~g~~~~~------~~------~~~~la~~~g~vvv~~nYRlg~ 155 (543)
T 2ha2_A 93 SEDCLY--LNVWTPYPR-P--ASPTPVLIWIYGGGFYSGAASLD------VY------DGRFLAQVEGAVLVSMNYRVGT 155 (543)
T ss_dssp ESCCCE--EEEEEESSC-C--SSCEEEEEEECCSTTTCCCTTSG------GG------CTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcCCe--EEEeecCCC-C--CCCCeEEEEECCCccccCCCCCC------cC------ChHHHHhcCCEEEEEecccccc
Confidence 456644 466778642 2 23589999999986544322100 01 1235565 79999998887 22
Q ss_pred CCCCChh-hhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--CCcccEEEEcccCC
Q 002209 724 IGEGDEE-ANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAY 794 (953)
Q Consensus 724 ~G~G~~~-~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~ 794 (953)
.|++... .....+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 156 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 3433221 11112245689999999999875 237999999999999999998887653 36899999999854
No 404
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.81 E-value=5.5e-09 Score=117.22 Aligned_cols=160 Identities=11% Similarity=-0.070 Sum_probs=102.7
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCCCCChhhh--hhhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~ 746 (953)
.|+||++||.... ....+.......|++ .||.|+.+|. +|+|.+... .........|+.++
T Consensus 70 ~~~vvllHG~~~s-------------~~~~w~~~~~~~l~~~~~~~Vi~~D~---~g~g~s~~~~~~~~~~~~~~dl~~~ 133 (432)
T 1gpl_A 70 RKTRFIIHGFTDS-------------GENSWLSDMCKNMFQVEKVNCICVDW---KGGSKAQYSQASQNIRVVGAEVAYL 133 (432)
T ss_dssp SEEEEEECCTTCC-------------TTSHHHHHHHHHHHHHCCEEEEEEEC---HHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-------------CCchHHHHHHHHHHhcCCcEEEEEEC---ccccCccchhhHhhHHHHHHHHHHH
Confidence 6899999995311 001111113445665 7999999554 566654322 12235567888999
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCCCCCCCCcCcccccchhhhhHHHHHhcCccccc
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSA 826 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 826 (953)
+++|.++..++.+++.|+||||||.+|+.++.++|+++++++.++|..-..... ++...+
T Consensus 134 i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~--------------------~~~~~l 193 (432)
T 1gpl_A 134 VQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDT--------------------PEEVRL 193 (432)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTC--------------------CTTTSC
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCC--------------------Chhhcc
Confidence 999976544567899999999999999999999999999999887753211000 000000
Q ss_pred -CCCCCcEEEEEeCCCCCCCCch---HHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002209 827 -NKLKKPILLVHGEEDNNSGTLT---MQSDRFFNALKGHGALCRLVILPFESHGY 877 (953)
Q Consensus 827 -~~i~~P~Li~~G~~D~~v~~~~---~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 877 (953)
.....++.++||..|.+|| . ..... . ..+..||+.||..
T Consensus 194 ~~~da~~V~vIHt~~d~lVP--~~~~g~~~~-------l---g~~dfypngg~~q 236 (432)
T 1gpl_A 194 DPSDAKFVDVIHTDISPILP--SLGFGMSQK-------V---GHMDFFPNGGKDM 236 (432)
T ss_dssp CGGGSSEEEEECSCCSCHHH--HCCCBCSSC-------C---SSEEEEEGGGSSC
T ss_pred CcCCCceEEEEEcCCccccc--ccccccccc-------c---cceEEccCCCCCC
Confidence 1223589999999999886 4 11111 1 2455689989954
No 405
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.75 E-value=8.2e-09 Score=119.08 Aligned_cols=132 Identities=17% Similarity=0.182 Sum_probs=88.8
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCC-C
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTP-I 723 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~-~ 723 (953)
+.|. +...+|.|.... .++|+||++|||.+..+... .. .+ ....|++ .|++|+.++|+- .
T Consensus 89 ~edc--l~lnv~~P~~~~----~~~Pv~v~iHGGg~~~g~~~--------~~-~~---~~~~la~~~~~vvv~~nYRlg~ 150 (529)
T 1p0i_A 89 SEDC--LYLNVWIPAPKP----KNATVLIWIYGGGFQTGTSS--------LH-VY---DGKFLARVERVIVVSMNYRVGA 150 (529)
T ss_dssp CSCC--CEEEEEEESSCC----SSEEEEEEECCSTTTSCCTT--------CG-GG---CTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcC--CeEEEeeCCCCC----CCCeEEEEECCCccccCCCC--------cc-cc---ChHHHhccCCeEEEEecccccc
Confidence 3455 445677886521 35899999999865443221 10 00 1235565 799999988862 2
Q ss_pred CCCCCh-hhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--CCcccEEEEcccCCC
Q 002209 724 IGEGDE-EANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYN 795 (953)
Q Consensus 724 ~G~G~~-~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~d 795 (953)
.|+... ......+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 151 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 151 LGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 233222 011112345688999999999875 247999999999999999999888763 358999999999753
No 406
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.74 E-value=3.7e-09 Score=122.37 Aligned_cols=130 Identities=18% Similarity=0.132 Sum_probs=85.7
Q ss_pred EEEEEEcC-----CCCCCCCC--CCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCC-
Q 002209 652 LSATLYLP-----PGYDPSKD--GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI- 723 (953)
Q Consensus 652 ~~~~l~~P-----~~~~~~~~--~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~- 723 (953)
+...+|.| .. ...++ .++|+||++|||.+..+..... .+ ....|+++|++|+.++|+..
T Consensus 91 L~lnv~~P~~~~~~~-~~~~~~~~~~Pviv~iHGGg~~~g~~~~~------~~------~~~~l~~~g~vvv~~nYRl~~ 157 (551)
T 2fj0_A 91 IHANIHVPYYALPRD-AADKNRFAGLPVLVFIHGGGFAFGSGDSD------LH------GPEYLVSKDVIVITFNYRLNV 157 (551)
T ss_dssp CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTT------TC------BCTTGGGGSCEEEEECCCCHH
T ss_pred eEEEEEecCcccccc-ccccCcCCCCCEEEEEcCCccccCCCccc------cc------CHHHHHhCCeEEEEeCCcCCc
Confidence 55677788 32 11111 1389999999987554332110 01 12356789999999888632
Q ss_pred CCCCChhhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCcccEEEEcccCC
Q 002209 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAY 794 (953)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~ 794 (953)
.|+.........+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 158 ~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 158 YGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 222221111112245689999999999876 23699999999999999999988875 346899999999863
No 407
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.73 E-value=2.8e-06 Score=92.82 Aligned_cols=228 Identities=11% Similarity=0.004 Sum_probs=117.3
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
......+||| |+.+...+ ..+++...|.++|.++++...-...+... ......+.|+||++.++.+ +....
T Consensus 140 Ph~~~~~pdG--i~Vs~~g~--~~g~~~g~v~vlD~~T~~v~~~~~~~~~~-~~~~Yd~~~~p~~~~mvsS--~wg~p-- 210 (462)
T 2ece_A 140 LHTVHCGPDA--IYISALGN--EEGEGPGGILMLDHYSFEPLGKWEIDRGD-QYLAYDFWWNLPNEVLVSS--EWAVP-- 210 (462)
T ss_dssp EEEEEECSSC--EEEEEEEE--TTSCSCCEEEEECTTTCCEEEECCSBCTT-CCCCCCEEEETTTTEEEEC--BCCCH--
T ss_pred ccceeECCCe--EEEEcCCC--cCCCCCCeEEEEECCCCeEEEEEccCCCC-ccccceEEECCCCCEEEEc--cCcCc--
Confidence 3445789999 44333221 23556789999999988765432211110 0001257889999977754 00000
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCC---Ccccc--cccCCCC
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP---AVYTS--LDPSPDE 343 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~---~~~~~--~~~SpDG 343 (953)
. .+... ....+ ... ....+|.++|+ +++.. .+.-+ ..... ++++|||
T Consensus 211 ------------------~----~~~~g-~~~~~--~~~-~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg 264 (462)
T 2ece_A 211 ------------------N----TIEDG-LKLEH--LKD-RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTK 264 (462)
T ss_dssp ------------------H----HHTTC-CCTTT--HHH-HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTC
T ss_pred ------------------c----ccccc-cchhh--hhh-ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCC
Confidence 0 00000 00000 000 13467889999 66432 33221 22223 4669999
Q ss_pred cEEEEEEecCCccccccCCCCCcceEEEeccCceEEEecc--CC---CcccCC---ccccccccCccceeeccCCCCceE
Q 002209 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD--LP---LAEDIP---IAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~--~~---~~~~~p---~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
+++.+..... ......+|++|..+++..+.+.. .+ ....+| ..+.+....+..+.+||||+.|+.
T Consensus 265 ~~aYV~~e~~-------~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYV 337 (462)
T 2ece_A 265 LMGFINMVVS-------LKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYL 337 (462)
T ss_dssp CEEEEEEEEE-------TTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEE
T ss_pred CEEEEEEeee-------ccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEE
Confidence 9888776410 01123477777666554332221 11 111111 111122234567999999997655
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe----ecc-------------cccCCeeeccCCceEEEEE
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH----KLD-------------LRYGGISWCDDSLALVYES 474 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~----~~~-------------~~~~~~~~SpDg~~l~~~~ 474 (953)
. ++ ..+.|.++++ .+.++.+.+. .+. +....+.+||||++|+.+.
T Consensus 338 S-nr-----------g~d~VavfdV--~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 338 S-LW-----------GIGEVRQYDI--SNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp E-ET-----------TTTEEEEEEC--SSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred E-eC-----------CCCEEEEEEe--cCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 4 22 3457888886 2333444331 111 1246789999999998876
No 408
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.72 E-value=7.8e-06 Score=92.66 Aligned_cols=268 Identities=11% Similarity=0.049 Sum_probs=153.0
Q ss_pred EeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002209 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (953)
Q Consensus 195 ~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 274 (953)
.+++||+.|+... ....|.++|+.+++........... +..+.|+ ++.|+...
T Consensus 124 ~~~~~g~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~--~~~l~s~~------------ 176 (445)
T 2ovr_B 124 CLQFCGNRIVSGS---------DDNTLKVWSAVTGKCLRTLVGHTGG----VWSSQMR--DNIIISGS------------ 176 (445)
T ss_dssp EEEEETTEEEEEE---------TTSCEEEEETTTCCEEEECCCCSSC----EEEEEEE--TTEEEEEE------------
T ss_pred EEEEcCCEEEEEE---------CCCcEEEEECCCCcEEEEEcCCCCC----EEEEEec--CCEEEEEe------------
Confidence 5778899988754 3567888999888765443322222 5677776 44666541
Q ss_pred CCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCCcEEEEEEe
Q 002209 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYILISSI 351 (953)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG~~l~~~~~ 351 (953)
..+.|.++|+ +++. ..+... ..+..+.| +++.|+..+.
T Consensus 177 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s~ 217 (445)
T 2ovr_B 177 -------------------------------------TDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSR 217 (445)
T ss_dssp -------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred -------------------------------------CCCeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEEEEeC
Confidence 2245777888 6653 334333 56666667 4677777764
Q ss_pred cCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccc
Q 002209 352 HRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (953)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~ 430 (953)
+ +.|.+||+..+. ...+..+. ..+..+.| ||+.++.. +
T Consensus 218 d-------------g~i~~wd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~~-------------~ 256 (445)
T 2ovr_B 218 D-------------ATLRVWDIETGQCLHVLMGHV-------------AAVRCVQY--DGRRVVSG-------------A 256 (445)
T ss_dssp T-------------SEEEEEESSSCCEEEEEECCS-------------SCEEEEEE--CSSCEEEE-------------E
T ss_pred C-------------CEEEEEECCCCcEEEEEcCCc-------------ccEEEEEE--CCCEEEEE-------------c
Confidence 3 389999998544 33333321 22345566 77766555 4
Q ss_pred cCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCC
Q 002209 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (953)
Q Consensus 431 ~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 510 (953)
..+.+.+||+ .++.....+..+...+..+.| |++.|+....++ .+.++|+.++ +...........
T Consensus 257 ~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~----~i~i~d~~~~--~~~~~~~~~~~~----- 321 (445)
T 2ovr_B 257 YDFMVKVWDP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT----SIRVWDVETG--NCIHTLTGHQSL----- 321 (445)
T ss_dssp TTSCEEEEEG--GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS----CEEEEETTTC--CEEEEECCCCSC-----
T ss_pred CCCEEEEEEC--CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC----eEEEEECCCC--CEEEEEcCCccc-----
Confidence 4567889986 222222334444455566777 888888776543 4666676664 222222222111
Q ss_pred CCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCcccc
Q 002209 511 GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGD 590 (953)
Q Consensus 511 ~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 590 (953)
...++++++.++....+ ..|.+||+.+++.......... ....+. +
T Consensus 322 ---v~~~~~~~~~l~~~~~d---------------------g~i~vwd~~~~~~~~~~~~~~~-~~~~v~---------~ 367 (445)
T 2ovr_B 322 ---TSGMELKDNILVSGNAD---------------------STVKIWDIKTGQCLQTLQGPNK-HQSAVT---------C 367 (445)
T ss_dssp ---EEEEEEETTEEEEEETT---------------------SCEEEEETTTCCEEEEECSTTS-CSSCEE---------E
T ss_pred ---EEEEEEeCCEEEEEeCC---------------------CeEEEEECCCCcEEEEEccCCC-CCCCEE---------E
Confidence 13456677776665521 2499999988876555443211 000111 2
Q ss_pred ccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002209 591 LYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (953)
Q Consensus 591 ~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~ 622 (953)
++.+++.++.... -..+.++++.+++..
T Consensus 368 ~~~~~~~l~s~~~----dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 368 LQFNKNFVITSSD----DGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEECSSEEEEEET----TSEEEEEETTTCCEE
T ss_pred EEECCCEEEEEeC----CCeEEEEECCCCcee
Confidence 2334555543332 246899998888653
No 409
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.71 E-value=5.4e-07 Score=98.22 Aligned_cols=253 Identities=9% Similarity=0.019 Sum_probs=130.7
Q ss_pred eEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCC-CCCCCCCCCCCCCCceeecCCCccccchhhhhh
Q 002209 220 RVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL-RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDL 298 (953)
Q Consensus 220 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (953)
.|+++|+++++...-...+.. - .+.+||||+.+|++.... +..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-----P-~i~~spDg~~lyVan~~~~r~~------------------------------ 90 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-----S-LAVAGHSGSDFALASTSFARSA------------------------------ 90 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-----C-EEEECTTSSCEEEEEEEETTTT------------------------------
T ss_pred eEEEEECCCCeEEEEEeCCCC-----C-ceEECCCCCEEEEEcccccccc------------------------------
Confidence 899999999886544333321 2 689999999999872100 000
Q ss_pred cCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC--------CcccccccCCCCcEEEEEEecCCccccccCCCCCcce
Q 002209 299 LKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP--------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQV 368 (953)
Q Consensus 299 ~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~--------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i 368 (953)
..+ ....|.++|+ ++++ ..+.-+ .....+++||||++|++..... ...+
T Consensus 91 -~G~---------~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~-----------~~~v 149 (368)
T 1mda_H 91 -KGK---------RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS-----------SAAA 149 (368)
T ss_dssp -SSS---------EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS-----------SCEE
T ss_pred -cCC---------CCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC-----------CCeE
Confidence 000 2356888998 7643 333211 2456889999999998875321 1246
Q ss_pred EE--EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEec---cC---------------------
Q 002209 369 GV--WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ---DG--------------------- 422 (953)
Q Consensus 369 ~~--~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~---~~--------------------- 422 (953)
.+ +|+.+ .+.+.........|. ....-+++++||+.+++-.+.. ++
T Consensus 150 ~V~~iD~~t--v~~i~v~~~~~~~p~------g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~ 221 (368)
T 1mda_H 150 GLSVPGASD--DQLTKSASCFHIHPG------AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp EEEETTTEE--EEEEECSSCCCCEEE------ETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred EEEEEchhh--ceEEECCCceEEccC------CCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcccccc
Confidence 66 66655 343322110000000 0111134556655433322110 00
Q ss_pred CCcccccccCCeEEEEecCCCCCCCceEEeec----------ccc---cCCeeeccCCceEEEEEecc-cC----ceEEE
Q 002209 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------DLR---YGGISWCDDSLALVYESWYK-TR----RTRTW 484 (953)
Q Consensus 423 ~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~----------~~~---~~~~~~SpDg~~l~~~~~~~-~~----~~~l~ 484 (953)
++..+..+. +.++++|. .++..+.+... ... ...+.++|||++++++.... .. ...+.
T Consensus 222 ~~~~~~vs~-~~V~viD~---~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDI---PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp TTEEEECBS-SCCEEEEC---CSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred CCEEEEEcC-CEEEEEEC---CCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 000001122 56777774 33322222111 111 12268999999988875511 10 12455
Q ss_pred EEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCCCCCeEEEEECCCCce
Q 002209 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSK 564 (953)
Q Consensus 485 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~~~ 564 (953)
++|+.+.. ....+.-.. ...+ +.|+|||+++++..... ...|.++|+++++.
T Consensus 298 ViD~~t~~-vv~~i~vg~--~p~g------i~~s~Dg~~l~va~~~~-------------------~~~VsVID~~t~kv 349 (368)
T 1mda_H 298 SVTASVGQ-TSGPISNGH--DSDA------IIAAQDGASDNYANSAG-------------------TEVLDIYDAASDQD 349 (368)
T ss_dssp EEESSSCC-EEECCEEEE--EECE------EEECCSSSCEEEEEETT-------------------TTEEEEEESSSCEE
T ss_pred EEECCCCe-EEEEEECCC--Ccce------EEECCCCCEEEEEccCC-------------------CCeEEEEECCCCcE
Confidence 99998852 111111110 1111 78999999888776311 12599999999887
Q ss_pred EEEec
Q 002209 565 ERIWE 569 (953)
Q Consensus 565 ~~l~~ 569 (953)
..-..
T Consensus 350 v~~I~ 354 (368)
T 1mda_H 350 QSSVE 354 (368)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 65443
No 410
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.71 E-value=1.2e-08 Score=117.69 Aligned_cols=132 Identities=16% Similarity=0.165 Sum_probs=88.3
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHH-HcCcEEEEcCCCC-C
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTP-I 723 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~V~~~~~~~-~ 723 (953)
+.|.. ...+|.|... . .++|+|||+|||.+..+...... + ....|+ +.|++|+.++|+- .
T Consensus 91 sedcl--~lnv~~P~~~--~--~~~Pv~v~iHGG~~~~g~~~~~~------~------~~~~la~~~~~vvv~~nYRlg~ 152 (537)
T 1ea5_A 91 SEDCL--YLNIWVPSPR--P--KSTTVMVWIYGGGFYSGSSTLDV------Y------NGKYLAYTEEVVLVSLSYRVGA 152 (537)
T ss_dssp CSCCC--EEEEEECSSC--C--SSEEEEEEECCSTTTCCCTTCGG------G------CTHHHHHHHTCEEEECCCCCHH
T ss_pred CCcCC--eEEEeccCCC--C--CCCeEEEEECCCcccCCCCCCCc------c------ChHHHHhcCCEEEEEeccCccc
Confidence 44554 4467788652 1 35999999999865543221100 1 123556 7899999988862 1
Q ss_pred CCCCCh-hhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--CCcccEEEEcccCCC
Q 002209 724 IGEGDE-EANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYN 795 (953)
Q Consensus 724 ~G~G~~-~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~d 795 (953)
.|+... ......+...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++... ..+|+++|+.+|...
T Consensus 153 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 153 FGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 232221 011112234589999999999876 237999999999999999998887742 358999999998653
No 411
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.66 E-value=3.2e-08 Score=113.88 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=85.7
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHH-HHHH-HcCcEEEEcCCCCCC-CCCC
Q 002209 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWL-ARGFAILGGPTTPII-GEGD 728 (953)
Q Consensus 652 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la-~~G~~V~~~~~~~~~-G~G~ 728 (953)
+...+|.|.+.... +++|+||++|||.+..+.. ..+. +...+ ..++ ..|++|+.++|+-.. |+..
T Consensus 98 l~l~v~~P~~~~~~--~~~Pv~v~iHGGg~~~g~~--------~~~~--~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~ 165 (534)
T 1llf_A 98 LTINVVRPPGTKAG--ANLPVMLWIFGGGFEIGSP--------TIFP--PAQMVTKSVLMGKPIIHVAVNYRVASWGFLA 165 (534)
T ss_dssp CEEEEEECTTCCTT--CCEEEEEEECCSTTTSCCG--------GGSC--CHHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred eEEEEEECCCCCCC--CCceEEEEEeCCCcccCCC--------cccC--chHHHHHHHhcCCCEEEEEeCCCCCCCCCCC
Confidence 55678889764332 3599999999986554321 1111 11111 1122 368999998886321 2211
Q ss_pred hh--hhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--------CCcccEEEEcccC
Q 002209 729 EE--ANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--------PHLFCCGIARSGA 793 (953)
Q Consensus 729 ~~--~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~~~ 793 (953)
.. .....+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++... +.+|+++|+.+|.
T Consensus 166 ~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 166 GDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp SHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 10 01122345689999999999875 237999999999999999888777653 4679999999984
No 412
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.64 E-value=7e-08 Score=104.25 Aligned_cols=174 Identities=13% Similarity=0.084 Sum_probs=102.2
Q ss_pred HcCcEEEEcCCCCCCCCCCh-----hhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----
Q 002209 710 ARGFAILGGPTTPIIGEGDE-----EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---- 780 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~-----~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---- 780 (953)
..+|.|+..+. .|+|.+ ............|+.+.++.+.. ..++.++||||||.+|..+|.+.
T Consensus 115 ~~~~~v~~~d~---~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~-----~~p~~l~G~S~GG~vA~~~A~~l~~~~ 186 (319)
T 2hfk_A 115 QEERDFLAVPL---PGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----DAPVVLLGHAGGALLAHELAFRLERAH 186 (319)
T ss_dssp TTTCCEEEECC---TTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEecC---CCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHHhh
Confidence 47899999444 566654 23333456667777666655431 25799999999999999999875
Q ss_pred CCcccEEEEcccCCCCCCCC---c-----------CcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCCCCC
Q 002209 781 PHLFCCGIARSGAYNRTLTP---F-----------GFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGT 846 (953)
Q Consensus 781 p~~~~a~v~~~~~~d~~~~~---~-----------~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~v~~ 846 (953)
++.++.+|++++........ + .+.............|...-.......+++|+++++| .|..++
T Consensus 187 g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~- 264 (319)
T 2hfk_A 187 GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGD- 264 (319)
T ss_dssp SCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSC-
T ss_pred CCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCC-
Confidence 45689998887642211000 0 0000000000011111110000123678899999999 999887
Q ss_pred chHH-HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhc
Q 002209 847 LTMQ-SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (953)
Q Consensus 847 ~~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (953)
... ...+.+. ....++++.+++ +|.....+....+.+.+.+||.+..
T Consensus 265 -~~~~~~~~~~~---~~~~~~~~~v~g-~H~~~~~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 265 -WQEERGDWRAH---WDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp -CCGGGCCCSCC---CSSCSEEEEESS-CTTHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -ccccccchhhc---CCCCCEEEEeCC-CcHHHHHHhHHHHHHHHHHHHHhcC
Confidence 544 2222111 122468888995 8974323467788888999998754
No 413
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.63 E-value=4.3e-06 Score=87.53 Aligned_cols=190 Identities=16% Similarity=0.124 Sum_probs=119.0
Q ss_pred CCeEEEEEeeccccCCCCcceEEEEECCCCceee-----cccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002209 200 GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP-----LFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (953)
Q Consensus 200 G~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~-----lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 274 (953)
|.+|+|+. ...|++++++++..+. +...+.. ....++|.++++.|+++.
T Consensus 1 ~~~l~~~~----------~~~I~~~~~~g~~~~~~~~~~~~~~~~~----~~~gi~~d~~~~~ly~~d------------ 54 (267)
T 1npe_A 1 GTHLLFAQ----------TGKIERLPLERNTMKKTEAKAFLHIPAK----VIIGLAFDCVDKVVYWTD------------ 54 (267)
T ss_dssp CEEEEEEE----------EEEEEEEEESSSCBCGGGCEEEEEEEEE----EEEEEEEETTTTEEEEEE------------
T ss_pred CcEEEEEc----------CCeEEEEEecCcccccccceeeecCCCC----cEEEEEEecCCCEEEEEE------------
Confidence 56788865 3489999998865432 1111111 145788999888888761
Q ss_pred CCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeC-CC-CcccccccCCCCcEEEEEEe
Q 002209 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG-PP-AVYTSLDPSPDEKYILISSI 351 (953)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~-~~-~~~~~~~~SpDG~~l~~~~~ 351 (953)
.....|+++++ ++....+. .. .....++++|+++.|+++..
T Consensus 55 ------------------------------------~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 55 ------------------------------------ISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp ------------------------------------TTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET
T ss_pred ------------------------------------CCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC
Confidence 02357889998 44444333 33 46678899999888887752
Q ss_pred cCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccccccc
Q 002209 352 HRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTP 431 (953)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~ 431 (953)
. ...|++++.+++..+.+..... ..+..++++|++..+++. +.. ..
T Consensus 99 ~------------~~~I~~~~~~g~~~~~~~~~~~------------~~P~~i~vd~~~g~lyv~-~~~---------~~ 144 (267)
T 1npe_A 99 Q------------LDRIEVAKMDGTQRRVLFDTGL------------VNPRGIVTDPVRGNLYWT-DWN---------RD 144 (267)
T ss_dssp T------------TTEEEEEETTSCSCEEEECSSC------------SSEEEEEEETTTTEEEEE-ECC---------SS
T ss_pred C------------CCEEEEEEcCCCCEEEEEECCC------------CCccEEEEeeCCCEEEEE-ECC---------CC
Confidence 2 2378899998765444432110 234578999987655443 221 11
Q ss_pred CCeEEEEecCCCCCCCceEEeec-ccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 432 RDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 432 ~~~l~~~d~~~~~g~~~~~l~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
...|++++. ++...+.+... ......+++++|++.|+++.... .+|++++.++.
T Consensus 145 ~~~I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~---~~I~~~~~~g~ 199 (267)
T 1npe_A 145 NPKIETSHM---DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT---HRAECLNPAQP 199 (267)
T ss_dssp SCEEEEEET---TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTEE
T ss_pred CcEEEEEec---CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCC---CEEEEEecCCC
Confidence 357888885 55554444322 23345689999999988875433 37999998763
No 414
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.63 E-value=5.5e-05 Score=82.74 Aligned_cols=118 Identities=13% Similarity=-0.060 Sum_probs=61.1
Q ss_pred ccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCce
Q 002209 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (953)
Q Consensus 336 ~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~ 414 (953)
.+..+||| |+++...++ .+..++.+.++|.++.++. .+....... .-...+.|+||++ ++
T Consensus 142 ~~~~~pdG--i~Vs~~g~~------~g~~~g~v~vlD~~T~~v~~~~~~~~~~~----------~~~Yd~~~~p~~~-~m 202 (462)
T 2ece_A 142 TVHCGPDA--IYISALGNE------EGEGPGGILMLDHYSFEPLGKWEIDRGDQ----------YLAYDFWWNLPNE-VL 202 (462)
T ss_dssp EEEECSSC--EEEEEEEET------TSCSCCEEEEECTTTCCEEEECCSBCTTC----------CCCCCEEEETTTT-EE
T ss_pred ceeECCCe--EEEEcCCCc------CCCCCCeEEEEECCCCeEEEEEccCCCCc----------cccceEEECCCCC-EE
Confidence 45789999 544443331 2334568999999865544 443221111 1123578999998 44
Q ss_pred EEEEe------ccCCCcc-cccccCCeEEEEecCCCCCCCce-EEeec-c-cccCC--eeeccCCceEEEEEe
Q 002209 415 YWAET------QDGGDAK-VEVTPRDIIYTQQAEPVQGEGPE-ILHKL-D-LRYGG--ISWCDDSLALVYESW 475 (953)
Q Consensus 415 ~~~~~------~~~~~~~-~~~~~~~~l~~~d~~~~~g~~~~-~l~~~-~-~~~~~--~~~SpDg~~l~~~~~ 475 (953)
|..+. ..+-... ......++|.+||+ +.++.. .+.-+ . ..... ++|+|||++++....
T Consensus 203 vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~---~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 203 VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL---RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET---TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred EEccCcCccccccccchhhhhhccCCEEEEEEC---CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence 44321 0110000 00023578999996 433322 22221 1 11122 356999998777654
No 415
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.62 E-value=6e-06 Score=86.41 Aligned_cols=200 Identities=10% Similarity=0.022 Sum_probs=124.0
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
....++|+|+++.|+++.. +...|++++++++....+....... ...+++.+++..|+++..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~--------~~~~I~~~~~~g~~~~~~~~~~~~~----p~~ia~d~~~~~lyv~d~------ 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDI--------SEPSIGRASLHGGEPTTIIRQDLGS----PEGIALDHLGRTIFWTDS------ 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEET--------TTTEEEEEESSSCCCEEEECTTCCC----EEEEEEETTTTEEEEEET------
T ss_pred cEEEEEEecCCCEEEEEEC--------CCCEEEEEecCCCCcEEEEECCCCC----ccEEEEEecCCeEEEEEC------
Confidence 4567899999999888642 3568999999987655443222111 457889998888887610
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCc-eeEeC-CC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIG-PP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~-~~~l~-~~-~~~~~~~~SpDG~~l 346 (953)
....|++++++|. .+.+. .. .....++++|++.+|
T Consensus 99 ------------------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~l 136 (267)
T 1npe_A 99 ------------------------------------------QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNL 136 (267)
T ss_dssp ------------------------------------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEE
T ss_pred ------------------------------------------CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEE
Confidence 2346788888553 33332 22 456778999988888
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
+++.... ....|+++++++...+.+..... ..+..++|+||++.|++. +
T Consensus 137 yv~~~~~----------~~~~I~~~~~dg~~~~~~~~~~~------------~~P~gia~d~~~~~lyv~-d-------- 185 (267)
T 1npe_A 137 YWTDWNR----------DNPKIETSHMDGTNRRILAQDNL------------GLPNGLTFDAFSSQLCWV-D-------- 185 (267)
T ss_dssp EEEECCS----------SSCEEEEEETTSCCCEEEECTTC------------SCEEEEEEETTTTEEEEE-E--------
T ss_pred EEEECCC----------CCcEEEEEecCCCCcEEEEECCC------------CCCcEEEEcCCCCEEEEE-E--------
Confidence 8775221 12378888888765554432111 234578999998866544 2
Q ss_pred cccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
...+.|++++. ++...+.+........++ +.|+..|+++.+.. . +|++++.+++
T Consensus 186 ---~~~~~I~~~~~---~g~~~~~~~~~~~~P~gi--~~d~~~lyva~~~~-~--~v~~~d~~~g 239 (267)
T 1npe_A 186 ---AGTHRAECLNP---AQPGRRKVLEGLQYPFAV--TSYGKNLYYTDWKT-N--SVIAMDLAIS 239 (267)
T ss_dssp ---TTTTEEEEEET---TEEEEEEEEECCCSEEEE--EEETTEEEEEETTT-T--EEEEEETTTT
T ss_pred ---CCCCEEEEEec---CCCceEEEecCCCCceEE--EEeCCEEEEEECCC-C--eEEEEeCCCC
Confidence 22457889985 444333333222222233 45677787765443 2 7999998875
No 416
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.62 E-value=3.4e-08 Score=113.94 Aligned_cols=134 Identities=23% Similarity=0.308 Sum_probs=86.9
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHH-HHH-HcCcEEEEcCCCCC
Q 002209 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVL-LWL-ARGFAILGGPTTPI 723 (953)
Q Consensus 646 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~la-~~G~~V~~~~~~~~ 723 (953)
+.|. +...+|.|.+.... .++|+|||+|||.+..+.. ..+. +...+. .++ ..|++|+.++|+..
T Consensus 102 sedc--l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~--~~~l~~~~l~~~~~~vvv~~nYRl~ 167 (544)
T 1thg_A 102 NEDC--LYLNVFRPAGTKPD--AKLPVMVWIYGGAFVYGSS--------AAYP--GNSYVKESINMGQPVVFVSINYRTG 167 (544)
T ss_dssp CSCC--CEEEEEEETTCCTT--CCEEEEEEECCCTTCCSGG--------GGCC--SHHHHHHHHHTTCCCEEEEECCCCH
T ss_pred CCCC--eEEEEEeCCCCCCC--CCCcEEEEECCCccccCCc--------cccC--chHHHHHHhhcCCCEEEEeCCCCCC
Confidence 3454 45567888764322 3599999999987554322 1111 111111 122 25899999888642
Q ss_pred C-CCCChhh--hhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--------CCcccEEEE
Q 002209 724 I-GEGDEEA--NDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--------PHLFCCGIA 789 (953)
Q Consensus 724 ~-G~G~~~~--~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~ 789 (953)
. |+..... ....+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++... ..+|+++|+
T Consensus 168 ~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~ 247 (544)
T 1thg_A 168 PFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAIL 247 (544)
T ss_dssp HHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEE
T ss_pred cccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEE
Confidence 2 2111100 0112345689999999999875 247999999999999999998887752 357999999
Q ss_pred cccC
Q 002209 790 RSGA 793 (953)
Q Consensus 790 ~~~~ 793 (953)
.+|.
T Consensus 248 ~Sg~ 251 (544)
T 1thg_A 248 QSGG 251 (544)
T ss_dssp ESCC
T ss_pred eccc
Confidence 9985
No 417
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.62 E-value=3.2e-06 Score=95.55 Aligned_cols=212 Identities=10% Similarity=0.058 Sum_probs=122.2
Q ss_pred EeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002209 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (953)
Q Consensus 195 ~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 274 (953)
.+++||+.|+... ....|.++|+.+++........... +..+.| |++.|+...
T Consensus 138 ~~~~d~~~l~~g~---------~dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~--~~~~l~sg~------------ 190 (435)
T 1p22_A 138 CLQYDDQKIVSGL---------RDNTIKIWDKNTLECKRILTGHTGS----VLCLQY--DERVIITGS------------ 190 (435)
T ss_dssp EEECCSSEEEEEE---------SSSCEEEEESSSCCEEEEECCCSSC----EEEEEC--CSSEEEEEE------------
T ss_pred EEEECCCEEEEEe---------CCCeEEEEeCCCCeEEEEEcCCCCc----EEEEEE--CCCEEEEEc------------
Confidence 5566999998855 2567888899888765544333322 556666 788887661
Q ss_pred CCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCC-CcccccccCCCCcEEEEEEe
Q 002209 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYILISSI 351 (953)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDG~~l~~~~~ 351 (953)
..+.|.++|+ +|+. ..+... ..+..+.|++ ..|+..+.
T Consensus 191 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~ 231 (435)
T 1p22_A 191 -------------------------------------SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSK 231 (435)
T ss_dssp -------------------------------------TTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEET
T ss_pred -------------------------------------CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeC
Confidence 2246778888 6654 334333 6677888874 46666663
Q ss_pred cCCccccccCCCCCcceEEEeccCceEEEe-ccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccc
Q 002209 352 HRPYSFIVPCGRFPRQVGVWTTDGIFVREL-CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (953)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l-~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~ 430 (953)
+ +.|.+||+..+....+ .... +....+..+.| ||+.++.. +
T Consensus 232 d-------------g~i~vwd~~~~~~~~~~~~~~----------~~~~~v~~~~~--~~~~l~s~-------------~ 273 (435)
T 1p22_A 232 D-------------RSIAVWDMASPTDITLRRVLV----------GHRAAVNVVDF--DDKYIVSA-------------S 273 (435)
T ss_dssp T-------------SCEEEEECSSSSCCEEEEEEC----------CCSSCEEEEEE--ETTEEEEE-------------E
T ss_pred C-------------CcEEEEeCCCCCCceeeeEec----------CCCCcEEEEEe--CCCEEEEE-------------e
Confidence 3 3899999985432211 1110 11122345666 67665554 4
Q ss_pred cCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCC
Q 002209 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (953)
Q Consensus 431 ~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 510 (953)
..+.+.+||+ .++.....+..+...+..+.| +++.|+....++ .|.++|+.++ +...........+
T Consensus 274 ~dg~i~vwd~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg----~i~iwd~~~~--~~~~~~~~h~~~v---- 339 (435)
T 1p22_A 274 GDRTIKVWNT--STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN----TIRLWDIECG--ACLRVLEGHEELV---- 339 (435)
T ss_dssp TTSEEEEEET--TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS----CEEEEETTTC--CEEEEECCCSSCE----
T ss_pred CCCeEEEEEC--CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC----eEEEEECCCC--CEEEEEeCCcCcE----
Confidence 4568999996 233223344445555556666 567777765443 4666676664 3333333332222
Q ss_pred CCCCeEeccCCCEEEEEe
Q 002209 511 GSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 511 ~~p~~~~SpDG~~l~~~~ 528 (953)
.....||++|+...
T Consensus 340 ----~~~~~~~~~l~sg~ 353 (435)
T 1p22_A 340 ----RCIRFDNKRIVSGA 353 (435)
T ss_dssp ----EEEECCSSEEEEEE
T ss_pred ----EEEEecCCEEEEEe
Confidence 22334788777665
No 418
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.62 E-value=1.7e-06 Score=91.63 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=69.4
Q ss_pred CCCCceecCC----CCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecC
Q 002209 110 PLPALSFSPQ----RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (953)
Q Consensus 110 ~~~~~~~SPD----G~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~ 185 (953)
.+..+++||| |++++..... ..++.+ +..++..-. . ...+..|.+|++..+|.. ...+..+
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~--~~v~~l--~~g~lv~ss--~-------~g~d~~V~~~~~s~dG~~--~~s~~~~ 177 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNI--KAVLGL--TKRRLVSSS--G-------TLSDQQVEVMTFAEDGGG--KENQFLM 177 (356)
T ss_dssp EEEEECC------CCEEEEEEEEE--EEEEEE--TTTEEEEEE--S-------SSTTCEEEEEEECTTSCE--EEEEEEC
T ss_pred ceEEEEECCCccccccEEEeCCCe--EEEEec--CCCcEEEec--c-------cCCCCcEEEEEECCCCce--eeeeccC
Confidence 5678899999 9999886542 111111 000000000 0 001357899999666532 2233333
Q ss_pred CCCCcccceEecc---CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEE
Q 002209 186 PDGAKLNFVTWSQ---DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 186 ~~~~~~~~~~wSP---DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 261 (953)
+ ..+...+||| ||+.|+-.+ .+..|.++|+++|+..+........ ...+...+|+|||+.++..
T Consensus 178 ~--~~v~~l~fs~~~g~~~~LaSgS---------~D~TIkIWDl~TGk~l~tL~g~~~~-v~~v~~vafSpdG~~lvs~ 244 (356)
T 2w18_A 178 P--PEETILTFAEVQGMQEALLGTT---------IMNNIVIWNLKTGQLLKKMHIDDSY-QASVCHKAYSEMGLLFIVL 244 (356)
T ss_dssp C--CSSCEEEEEEEETSTTEEEEEE---------TTSEEEEEETTTCCEEEEEECCC----CCCEEEEEEETTEEEEEE
T ss_pred C--CceeeEEeeccCCCCceEEEec---------CCCcEEEEECCCCcEEEEEcCCCcc-eeeeEEEEECCCCCEEEEe
Confidence 3 3577889999 778887754 3678999999998864433221111 0113456899999988765
No 419
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.61 E-value=3.4e-06 Score=91.33 Aligned_cols=191 Identities=9% Similarity=-0.011 Sum_probs=111.6
Q ss_pred CCCeEEEEEeeccccCCCCcceEEEEECCCCcee-ecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCC
Q 002209 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR-PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPL 277 (953)
Q Consensus 199 DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 277 (953)
++++|+.+.. ....|.++|+++++.. .+..... ...+++++|| .|+++.
T Consensus 52 ~~~~lyv~~~--------~~~~v~viD~~t~~~~~~i~~~~~------p~~i~~~~~g-~lyv~~--------------- 101 (328)
T 3dsm_A 52 RDGIGWIVVN--------NSHVIFAIDINTFKEVGRITGFTS------PRYIHFLSDE-KAYVTQ--------------- 101 (328)
T ss_dssp ETTEEEEEEG--------GGTEEEEEETTTCCEEEEEECCSS------EEEEEEEETT-EEEEEE---------------
T ss_pred ECCEEEEEEc--------CCCEEEEEECcccEEEEEcCCCCC------CcEEEEeCCC-eEEEEE---------------
Confidence 5666666542 2468999999988864 3422222 4578898999 566551
Q ss_pred CCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCcee-EeCCCC------cccccccCCCCcEEEEE
Q 002209 278 GPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPA------VYTSLDPSPDEKYILIS 349 (953)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~-~l~~~~------~~~~~~~SpDG~~l~~~ 349 (953)
. ....|+++|+ +++.. .+..+. ....+++ ++++|+++
T Consensus 102 ------------------------~---------~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~ 146 (328)
T 3dsm_A 102 ------------------------I---------WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVN 146 (328)
T ss_dssp ------------------------B---------SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEE
T ss_pred ------------------------C---------CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEE
Confidence 0 1246888898 77654 333222 4556666 66777666
Q ss_pred EecCCccccccCCCCCcceEEEeccCceEE-EeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002209 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (953)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (953)
... ....|.++|+++++.. .+... ..+..+.++|||+ +++. ...+......
T Consensus 147 ~~~-----------~~~~v~viD~~t~~~~~~i~~g--------------~~p~~i~~~~dG~-l~v~-~~~~~~~~~~- 198 (328)
T 3dsm_A 147 CWS-----------YQNRILKIDTETDKVVDELTIG--------------IQPTSLVMDKYNK-MWTI-TDGGYEGSPY- 198 (328)
T ss_dssp ECT-----------TCCEEEEEETTTTEEEEEEECS--------------SCBCCCEECTTSE-EEEE-BCCBCTTCSS-
T ss_pred cCC-----------CCCEEEEEECCCCeEEEEEEcC--------------CCccceEEcCCCC-EEEE-ECCCccCCcc-
Confidence 411 1348999999865543 33221 1234688999997 4333 2111000000
Q ss_pred cccCCeEEEEecCCCCCCCce-EEeec-ccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 429 VTPRDIIYTQQAEPVQGEGPE-ILHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 429 ~~~~~~l~~~d~~~~~g~~~~-~l~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
....+.|+++|. .+++.. .+.-. ......++|+|||++|++... .++++|++++
T Consensus 199 ~~~~~~v~~id~---~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~ 254 (328)
T 3dsm_A 199 GYEAPSLYRIDA---ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPVEAD 254 (328)
T ss_dssp CBCCCEEEEEET---TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEETTCS
T ss_pred ccCCceEEEEEC---CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEECCCC
Confidence 011368999995 434333 23221 124567999999999887632 5899999875
No 420
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.61 E-value=5.7e-08 Score=113.16 Aligned_cols=115 Identities=18% Similarity=0.120 Sum_probs=78.6
Q ss_pred CCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCC-CCCCCCCh-------hhhhhhHHH
Q 002209 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTT-PIIGEGDE-------EANDRFVEQ 738 (953)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~-~~~G~G~~-------~~~~~~~~~ 738 (953)
.++|||||+|||.+..+... .. .+. ...|++ .|++|+.++|+ +..|+... ......+..
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~--------~~-~~~---~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~ 206 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSAT--------LD-IYN---ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNV 206 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTT--------CG-GGC---CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCH
T ss_pred CCCCEEEEECCCcccCCCCC--------CC-CCC---chhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcc
Confidence 35899999999875543221 11 011 234554 79999998887 33333221 011112344
Q ss_pred HHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCcccEEEEcccCC
Q 002209 739 LVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAY 794 (953)
Q Consensus 739 ~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~ 794 (953)
.+.|+.++++|+.++- ..|+++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 207 gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 207 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 5889999999998862 36899999999999999998887753 35899999999864
No 421
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.60 E-value=3.2e-06 Score=91.53 Aligned_cols=231 Identities=11% Similarity=0.050 Sum_probs=127.9
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCC-ccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYL 242 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~ 242 (953)
.|.++|..+ + .....+. .+......+++||| +|+.+.. ....|+++|+++++.......+. ...
T Consensus 65 ~v~viD~~t-~--~~~~~i~---~~~~p~~i~~~~~g-~lyv~~~--------~~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 65 VIFAIDINT-F--KEVGRIT---GFTSPRYIHFLSDE-KAYVTQI--------WDYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp EEEEEETTT-C--CEEEEEE---CCSSEEEEEEEETT-EEEEEEB--------SCSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EEEEEECcc-c--EEEEEcC---CCCCCcEEEEeCCC-eEEEEEC--------CCCeEEEEECCCCeEEEEEEcCCcccc
Confidence 578988743 2 2223443 23456778899998 5544321 25689999999987653222121 000
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-
Q 002209 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (953)
Q Consensus 243 ~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~- 321 (953)
......+++ +++.|+++.. . ....|.++|+
T Consensus 130 ~~~p~~i~~--~~~~lyv~~~--------------------------------------~---------~~~~v~viD~~ 160 (328)
T 3dsm_A 130 SGSTEQMVQ--YGKYVYVNCW--------------------------------------S---------YQNRILKIDTE 160 (328)
T ss_dssp TCBCCCEEE--ETTEEEEEEC--------------------------------------T---------TCCEEEEEETT
T ss_pred CCCcceEEE--ECCEEEEEcC--------------------------------------C---------CCCEEEEEECC
Confidence 001335566 4555655410 0 1346889998
Q ss_pred CCcee-EeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccC
Q 002209 322 DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (953)
Q Consensus 322 ~g~~~-~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (953)
+++.. .+........+.++|||+ ++++....... .+.......|+++|.+++++......+.. ..
T Consensus 161 t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~--~~~~~~~~~v~~id~~t~~v~~~~~~~~g-----------~~ 226 (328)
T 3dsm_A 161 TDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEG--SPYGYEAPSLYRIDAETFTVEKQFKFKLG-----------DW 226 (328)
T ss_dssp TTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTT--CSSCBCCCEEEEEETTTTEEEEEEECCTT-----------CC
T ss_pred CCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccC--CccccCCceEEEEECCCCeEEEEEecCCC-----------CC
Confidence 77543 343335567889999998 44444221000 00001124799999986665432221110 13
Q ss_pred ccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCce--E-EeecccccCCeeeccCCceEEEEEecc
Q 002209 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE--I-LHKLDLRYGGISWCDDSLALVYESWYK 477 (953)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~--~-l~~~~~~~~~~~~SpDg~~l~~~~~~~ 477 (953)
+..++|+|||+.+++. .. .++++|. ++++.. . +.........++++|++..|+.+...+
T Consensus 227 p~~la~~~d~~~lyv~-------------~~--~v~~~d~---~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~ 288 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWI-------------NN--DIWRMPV---EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAID 288 (328)
T ss_dssp CEEEEECTTSCEEEEE-------------SS--SEEEEET---TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTT
T ss_pred ceeEEEecCCCEEEEE-------------cc--EEEEEEC---CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccc
Confidence 4679999999876665 22 7889985 333321 1 111123345689999877777764110
Q ss_pred -cCceEEEEEcCCC
Q 002209 478 -TRRTRTWVISPGS 490 (953)
Q Consensus 478 -~~~~~l~~~d~~~ 490 (953)
.....|+++++++
T Consensus 289 y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 289 YQQQGIVYRYSPQG 302 (328)
T ss_dssp SSSEEEEEEECTTC
T ss_pred cccCCEEEEECCCC
Confidence 1124788888773
No 422
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.60 E-value=4.4e-06 Score=89.51 Aligned_cols=218 Identities=9% Similarity=0.085 Sum_probs=120.1
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeec-ccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL-FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-t~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
.+....++||+..|++... ...|++++.+ |+.+.+ ...........+..+++.+||+..+.. ......
T Consensus 72 ~~~~i~~~~~~g~l~v~~~---------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~-~~~~~~ 140 (314)
T 1pjx_A 72 IPAGCQCDRDANQLFVADM---------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITA-PAGEVA 140 (314)
T ss_dssp CEEEEEECSSSSEEEEEET---------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEE-CBCBCT
T ss_pred CCceEEEecCCCcEEEEEC---------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEe-cCcccc
Confidence 4667889999334544331 2379999998 777665 432211001125578899999755433 110000
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCCC-CcccccccC----CCC
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPS----PDE 343 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~S----pDG 343 (953)
+. +...... .....|++++.+|+...+... .....++|+ |||
T Consensus 141 -~~-------------------------~~~~~~~-------~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 141 -PA-------------------------DYTRSMQ-------EKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRP 187 (314)
T ss_dssp -TS-------------------------CCCBTTS-------SSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCE
T ss_pred -cc-------------------------ccccccc-------CCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCC
Confidence 00 0000000 023568888876655554333 445678899 999
Q ss_pred cEEEEEEecCCccccccCCCCCcceEEEecc-CceEE---EeccCCCcccCCccccccccCccceeeccCCCCceEEEEe
Q 002209 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVR---ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (953)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~-g~~~~---~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~ 419 (953)
+.|+++... ...|++|+++ .+... .+...+... ...+..+++++||+ +|...
T Consensus 188 ~~l~v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~---------~~~p~~i~~d~~G~--l~v~~- 243 (314)
T 1pjx_A 188 YQLIVAETP------------TKKLWSYDIKGPAKIENKKVWGHIPGTH---------EGGADGMDFDEDNN--LLVAN- 243 (314)
T ss_dssp EEEEEEETT------------TTEEEEEEEEETTEEEEEEEEEECCCCS---------SCEEEEEEEBTTCC--EEEEE-
T ss_pred CEEEEEECC------------CCeEEEEECCCCCccccceEEEECCCCC---------CCCCCceEECCCCC--EEEEE-
Confidence 988776522 2378999876 33322 111111100 01234688999995 33311
Q ss_pred ccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
...+.|++++. .++.....+.........++|+|||+.|+++...+ ..|+.++++.
T Consensus 244 ----------~~~~~i~~~d~--~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~---~~l~~~~~~~ 299 (314)
T 1pjx_A 244 ----------WGSSHIEVFGP--DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHEN---NAVWKFEWQR 299 (314)
T ss_dssp ----------ETTTEEEEECT--TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTT---TEEEEEECSS
T ss_pred ----------cCCCEEEEEcC--CCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCC---CeEEEEeCCC
Confidence 12457888884 22433444443334566789999999887765433 2688888765
No 423
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.59 E-value=3.3e-08 Score=114.45 Aligned_cols=140 Identities=18% Similarity=0.141 Sum_probs=85.4
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCC-
Q 002209 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTP- 722 (953)
Q Consensus 645 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~- 722 (953)
.+.|. +...+|.|..... ...++|+|||+|||.+..+..... .+..........|+. .|++|+.++|+-
T Consensus 76 ~sedc--l~lnv~~P~~~~~-~~~~~PV~v~iHGGg~~~Gs~~~~------~~~~~~~~~~~~la~~~~vvvV~~nYRLg 146 (579)
T 2bce_A 76 GNEDC--LYLNIWVPQGRKE-VSHDLPVMIWIYGGAFLMGASQGA------NFLSNYLYDGEEIATRGNVIVVTFNYRVG 146 (579)
T ss_dssp SCSCC--CEEEEEEEECSSS-CCCSEEEEEECCCCSEEEC-------------CTTGGGCCHHHHHHHTCEEEEECCCCH
T ss_pred CCCCC--CEEEEEECCCCCC-CCCCCeEEEEECCCcccCCCCCcc------ccccccccChHHHhcCCCEEEEEeCCccc
Confidence 34565 4456778865321 123589999999986543322100 000000000234554 579999988862
Q ss_pred CCCCCChhhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCcccEEEEcccC
Q 002209 723 IIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGA 793 (953)
Q Consensus 723 ~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~ 793 (953)
..|+.............+.|+.+|++|+.++ ...|+++|.|+|+|+||.++..++.. ...+|+++|+.+|.
T Consensus 147 ~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 147 PLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred cccCCcCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 2232211100111123478999999999875 24799999999999999999888764 34689999999875
No 424
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.59 E-value=2.2e-06 Score=96.68 Aligned_cols=104 Identities=6% Similarity=0.039 Sum_probs=67.8
Q ss_pred CcccccccCCC-CcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCC
Q 002209 332 AVYTSLDPSPD-EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (953)
Q Consensus 332 ~~~~~~~~SpD-G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg 410 (953)
..+..++|+|+ ++.|+..+.+ +.|.+||+..+....... .....+..++|+|||
T Consensus 150 ~~V~~v~~~p~~~~~las~s~D-------------g~v~iwD~~~~~~~~~~~------------~~~~~v~~v~wspdg 204 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLAD-------------GSIAVLQVTETVKVCATL------------PSTVAVTSVCWSPKG 204 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETT-------------SCEEEEEESSSEEEEEEE------------CGGGCEEEEEECTTS
T ss_pred CceEEEEECCCCCCEEEEEECC-------------CeEEEEEcCCCcceeecc------------CCCCceeEEEEcCCC
Confidence 66888999998 6777766644 389999998653221111 111345689999999
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecc-------cccCCeeeccCCceEEEEEec
Q 002209 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-------LRYGGISWCDDSLALVYESWY 476 (953)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~-------~~~~~~~~SpDg~~l~~~~~~ 476 (953)
+.|+.. +..+.|.+||. .+.....+.... ..+..+.|++++..++.....
T Consensus 205 ~~lasg-------------s~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~ 261 (434)
T 2oit_A 205 KQLAVG-------------KQNGTVVQYLP---TLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA 261 (434)
T ss_dssp SCEEEE-------------ETTSCEEEECT---TCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEET
T ss_pred CEEEEE-------------cCCCcEEEEcc---CCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccC
Confidence 988776 44567899986 332222332221 256678999999887655443
No 425
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.59 E-value=3.3e-07 Score=94.67 Aligned_cols=163 Identities=13% Similarity=0.030 Sum_probs=90.8
Q ss_pred HcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCcccE
Q 002209 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFCC 786 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~a 786 (953)
..+|.|+.++. .|++. .+.++.+.++.+ . ...++.++||||||.++..++.+. ++.++.
T Consensus 46 ~~~~~v~~~d~---~g~~~----------~~~~~~~~i~~~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~ 107 (244)
T 2cb9_A 46 NHKAAVYGFHF---IEEDS----------RIEQYVSRITEI---Q--PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSD 107 (244)
T ss_dssp TTTSEEEEECC---CCSTT----------HHHHHHHHHHHH---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCceEEEEcC---CCHHH----------HHHHHHHHHHHh---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccE
Confidence 46899999665 44432 234444444333 1 135799999999999999998864 567888
Q ss_pred EEEcccCCCCCCCC-cCcccc----cch-hhh----hHHHHHhcCc-ccccCCCCCcEEEEEeC--CCCCCCCchHHHHH
Q 002209 787 GIARSGAYNRTLTP-FGFQNE----DRT-LWE----ATSTYVEMSP-FMSANKLKKPILLVHGE--EDNNSGTLTMQSDR 853 (953)
Q Consensus 787 ~v~~~~~~d~~~~~-~~~~~~----~~~-~~~----~~~~~~~~sp-~~~~~~i~~P~Li~~G~--~D~~v~~~~~~~~~ 853 (953)
+|++++........ ...... ... ... ....+..+.. ......+++|+++++|+ .|. ++ +.....
T Consensus 108 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~-~~--~~~~~~ 184 (244)
T 2cb9_A 108 FIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRCYQEYWAQLINEGRIKSNIHFIEAGIQTET-SG--AMVLQK 184 (244)
T ss_dssp EEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHHHHHHHHHCCCCSCBSSEEEEEECSBCSCC-CH--HHHTTS
T ss_pred EEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCCEEEEEccCcccc-cc--ccchhH
Confidence 88877653210000 000000 000 000 0011111111 12346788999999999 886 33 333222
Q ss_pred HHHHHHhCCCcEEEEEeCCCCcc-CCCcccHHHHHHHHHHHHHHh
Q 002209 854 FFNALKGHGALCRLVILPFESHG-YAARESIMHVLWETDRWLQKY 897 (953)
Q Consensus 854 ~~~~l~~~g~~~~~~~~~~~~H~-~~~~~~~~~~~~~i~~fl~~~ 897 (953)
+.+. ...+++++.+|+ +|. +...+....+.+.+.+||.+.
T Consensus 185 w~~~---~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~~~ 225 (244)
T 2cb9_A 185 WQDA---AEEGYAEYTGYG-AHKDMLEGEFAEKNANIILNILDKI 225 (244)
T ss_dssp SGGG---BSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHHTC
T ss_pred HHHh---cCCCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHhcC
Confidence 2111 123589999997 893 223455667777788887654
No 426
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.58 E-value=1.4e-06 Score=98.29 Aligned_cols=151 Identities=13% Similarity=0.130 Sum_probs=92.4
Q ss_pred CcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCC-----ce------eecccCCCccccccccceEEecC-Ce
Q 002209 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-----KA------RPLFQSPDIYLNAIFDNFVWVNN-ST 256 (953)
Q Consensus 189 ~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g-----~~------~~lt~~~~~~~~~~~~~~~wspD-g~ 256 (953)
..+...+|||||++|+..... +.....|.++|++++ +. .++... ....+..++|+|+ ++
T Consensus 93 ~~v~~l~~spdg~~lav~~~s-----gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~----h~~~V~~v~~~p~~~~ 163 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMS-----SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD----AGGMVIDMKWNPTVPS 163 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEE-----TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS----GGGSEEEEEECSSCTT
T ss_pred CcccEEEEcCCCCEEEEEEec-----cCCCceEEEEEccccccCCcCCcceeeeeeccCC----CCCceEEEEECCCCCC
Confidence 358889999999999863210 234667888887654 11 111111 1223778999998 67
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeE-eCCC-Cc
Q 002209 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPP-AV 333 (953)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~-l~~~-~~ 333 (953)
.|+... ..+.|.++|+ ++.... .... ..
T Consensus 164 ~las~s-------------------------------------------------~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 164 MVAVCL-------------------------------------------------ADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp EEEEEE-------------------------------------------------TTSCEEEEEESSSEEEEEEECGGGC
T ss_pred EEEEEE-------------------------------------------------CCCeEEEEEcCCCcceeeccCCCCc
Confidence 777551 2245667787 663322 2222 57
Q ss_pred ccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCc
Q 002209 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (953)
Q Consensus 334 ~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i 413 (953)
+..++|||||++|+..+.++ .|.+||+++...+.+........ .....+..+.|++++..+
T Consensus 195 v~~v~wspdg~~lasgs~dg-------------~v~iwd~~~~~~~~~~~~~~~~~------~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNG-------------TVVQYLPTLQEKKVIPCPPFYES------DHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEEEEECTTSSCEEEEETTS-------------CEEEECTTCCEEEEECCCTTCCT------TSCEEEEEEEEEETTEEE
T ss_pred eeEEEEcCCCCEEEEEcCCC-------------cEEEEccCCcccccccCCcccCC------CCceeEEEEEEecCceEE
Confidence 88999999999999887443 89999998554444433221100 001234679999988654
Q ss_pred eEE
Q 002209 414 LYW 416 (953)
Q Consensus 414 ~~~ 416 (953)
+..
T Consensus 256 ~~~ 258 (434)
T 2oit_A 256 IVY 258 (434)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 427
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.57 E-value=1.2e-05 Score=89.83 Aligned_cols=225 Identities=8% Similarity=-0.080 Sum_probs=121.1
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce-eecc---cCCC
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLF---QSPD 239 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt---~~~~ 239 (953)
.|++++..+ +....+... ..... ++|+|||+.|+.... .+...||+++.+++.. +.+. ....
T Consensus 153 ~I~~id~~~----g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~-------~~~~~I~~~d~~~~~~~~~~g~~~~~~~ 218 (409)
T 3hrp_A 153 RVRLISVDD----NKVTTVHPG--FKGGK-PAVTKDKQRVYSIGW-------EGTHTVYVYMKASGWAPTRIGQLGSTFS 218 (409)
T ss_dssp EEEEEETTT----TEEEEEEET--CCBCB-CEECTTSSEEEEEBS-------STTCEEEEEEGGGTTCEEEEEECCTTSC
T ss_pred cEEEEECCC----CEEEEeecc--CCCCc-eeEecCCCcEEEEec-------CCCceEEEEEcCCCceeEEeeeccchhc
Confidence 578888732 333333321 22334 999999998777542 1233899999887654 2231 1011
Q ss_pred ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 240 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
.. ...++++|++..|++.. ....|+++
T Consensus 219 ~~----p~~iav~p~~g~lyv~d-------------------------------------------------~~~~I~~~ 245 (409)
T 3hrp_A 219 GK----IGAVALDETEEWLYFVD-------------------------------------------------SNKNFGRF 245 (409)
T ss_dssp SC----CCBCEECTTSSEEEEEC-------------------------------------------------TTCEEEEE
T ss_pred CC----cEEEEEeCCCCeEEEEE-------------------------------------------------CCCcEEEE
Confidence 11 45788999655666550 22468888
Q ss_pred Ec-CCceeEe----CCC-Ccc--c-ccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccC
Q 002209 320 SL-DGTVKEI----GPP-AVY--T-SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDI 390 (953)
Q Consensus 320 ~~-~g~~~~l----~~~-~~~--~-~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~ 390 (953)
+. ++....+ ... ... . .++|+|++..|+++... ...|++++.++. ...+.........
T Consensus 246 d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~-~~~~~g~~~~~g~ 312 (409)
T 3hrp_A 246 NVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------------LSSVYKITPDGE-CEWFCGSATQKTV 312 (409)
T ss_dssp ETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------------TTEEEEECTTCC-EEEEEECTTCCSC
T ss_pred ECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------------CCEEEEEecCCC-EEEEEeCCCCCCc
Confidence 88 6655444 222 112 2 78999987777766522 247889988876 3333222100000
Q ss_pred C--ccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec--------------
Q 002209 391 P--IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-------------- 454 (953)
Q Consensus 391 p--~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~-------------- 454 (953)
. .........+..++++|||+ +|+++. .....|+++++ ..+....+...
T Consensus 313 ~dg~~~~~~~~~P~gia~d~dG~--lyvad~----------~~~~~I~~~~~---~~G~v~~~~g~~~~~g~~~g~~~~~ 377 (409)
T 3hrp_A 313 QDGLREEALFAQPNGMTVDEDGN--FYIVDG----------FKGYCLRKLDI---LDGYVSTVAGQVDVASQIDGTPLEA 377 (409)
T ss_dssp BCEEGGGCBCSSEEEEEECTTCC--EEEEET----------TTTCEEEEEET---TTTEEEEEEECTTCBSCCCBSTTTC
T ss_pred CCCcccccEeCCCeEEEEeCCCC--EEEEeC----------CCCCEEEEEEC---CCCEEEEEeCCCCCCCcCCCChhce
Confidence 0 00001113356799999997 444322 03457888884 33444444322
Q ss_pred -ccccCCeeeccCCceEEEEEecccCceEEEEEc
Q 002209 455 -DLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 455 -~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 487 (953)
......+++++||. |+++...+ .+|+.++
T Consensus 378 ~~~~P~giavd~~g~-lyVad~~n---~~Ir~i~ 407 (409)
T 3hrp_A 378 TFNYPYDICYDGEGG-YWIAEAWG---KAIRKYA 407 (409)
T ss_dssp CBSSEEEEEECSSSE-EEEEESTT---CEEEEEE
T ss_pred EeCCceEEEEcCCCC-EEEEECCC---CeEEEEE
Confidence 01234578888854 44443322 2565554
No 428
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.52 E-value=3.9e-07 Score=101.39 Aligned_cols=86 Identities=17% Similarity=0.080 Sum_probs=66.9
Q ss_pred HHHH-cCcEEEEcCCCCCCCCCChhhhh--h----------hHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeChHHHH
Q 002209 707 LWLA-RGFAILGGPTTPIIGEGDEEAND--R----------FVEQLVACAEAAVEEVVRRG-VAHPSKIAVGGHSYGAFM 772 (953)
Q Consensus 707 ~la~-~G~~V~~~~~~~~~G~G~~~~~~--~----------~~~~~~~D~~~~~~~l~~~~-~~d~~~i~l~G~S~GG~~ 772 (953)
.+|+ .|+.|+. .+.+|+|+|.... . ..++.++|+...++++.... .....++.++||||||.+
T Consensus 63 ~lA~~~~~~Vi~---~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~l 139 (446)
T 3n2z_B 63 DVAEELKAMLVF---AEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGML 139 (446)
T ss_dssp HHHHHHTEEEEE---ECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHH
T ss_pred HHHHHhCCcEEE---EecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHH
Confidence 4554 5889999 5667888884311 1 25788999999999998752 223458999999999999
Q ss_pred HHHHHHhCCCcccEEEEcccCCC
Q 002209 773 TANLLAHAPHLFCCGIARSGAYN 795 (953)
Q Consensus 773 a~~~a~~~p~~~~a~v~~~~~~d 795 (953)
|++++.++|+++.++|+.+++..
T Consensus 140 A~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 140 AAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHhhhccccEEEEeccchh
Confidence 99999999999999998776543
No 429
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.52 E-value=1.5e-06 Score=94.73 Aligned_cols=287 Identities=9% Similarity=-0.073 Sum_probs=131.9
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccc-cCCCCcceEEEEECCCCceeecccCC-Ccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSP-DIY 241 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~-~~~~~~~~l~~~d~~~g~~~~lt~~~-~~~ 241 (953)
.+.++|..+ .+ .+..++.+... .+.+||||++|+.+...... ..+.....|.++|+.+++...-...+ ..+
T Consensus 47 ~vsvID~~t----~~--v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGC----GV--TLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTT----TE--EEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCC----Ce--EEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 578888743 22 22223333334 79999999999887532100 01122567999999998764432222 000
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 242 ~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
. ......+++||||++++++.......... .+.+...-..+...... .+.......++.....+.+..+
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V--------~~iD~~tv~~i~v~~~~-~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGL--------SVPGASDDQLTKSASCF-HIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEE--------EETTTEEEEEEECSSCC-CCEEEETTEEECCCCTTSCEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEE--------EEEchhhceEEECCCce-EEccCCCeEEEEEcCCCCEEEE
Confidence 0 00134889999999999872211000000 00000000000000000 0000000001111123344455
Q ss_pred Ec-C-----CceeEeC---CCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccC
Q 002209 320 SL-D-----GTVKEIG---PPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDI 390 (953)
Q Consensus 320 ~~-~-----g~~~~l~---~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~ 390 (953)
++ + |+..... -.-. ..+..++|++.++|++. +.+++.|+.++..+.+.........
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg-~~P~~~~~~~~~~~vs~--------------~~V~viD~~~~~~~v~~~~~~~~~~ 255 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCS-SQAAQANYPGMLVWAVA--------------SSILQGDIPAAGATMKAAIDGNESG 255 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBC-SCCEEETTTTEEEECBS--------------SCCEEEECCSSCCEEECCCCSSCTH
T ss_pred ECccccccCCeEEEEeeeeeeCC-CCccccccCCEEEEEcC--------------CEEEEEECCCCcceEEEEEEecccc
Confidence 55 3 3221100 0000 01112777777777763 3788888875443333322111000
Q ss_pred CccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCc-eEEeecccccCCeeeccCCce
Q 002209 391 PIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLA 469 (953)
Q Consensus 391 p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~-~~l~~~~~~~~~~~~SpDg~~ 469 (953)
.........+...++++|||+++++......+. . . ...+.+.++|+ ...+. ..+.-+ ....++.|+|||++
T Consensus 256 ~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~-~-~--~~~~~~~ViD~---~t~~vv~~i~vg-~~p~gi~~s~Dg~~ 327 (368)
T 1mda_H 256 RKADNFRSAGFQMVAKLKNTDGIMILTVEHSRS-C-L--AAAENTSSVTA---SVGQTSGPISNG-HDSDAIIAAQDGAS 327 (368)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECSSC-T-T--SCEEEEEEEES---SSCCEEECCEEE-EEECEEEECCSSSC
T ss_pred ccccccccCcceeeEEcCCCCEEEEEeccccCc-c-c--ccCCCEEEEEC---CCCeEEEEEECC-CCcceEEECCCCCE
Confidence 000000012223378999999866652211000 0 0 00124558885 33332 223222 24677999999999
Q ss_pred EEEEEecccCceEEEEEcCCCC
Q 002209 470 LVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
++++.+.... .|.++|+.+.
T Consensus 328 l~va~~~~~~--~VsVID~~t~ 347 (368)
T 1mda_H 328 DNYANSAGTE--VLDIYDAASD 347 (368)
T ss_dssp EEEEEETTTT--EEEEEESSSC
T ss_pred EEEEccCCCC--eEEEEECCCC
Confidence 8888762223 7999999885
No 430
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.51 E-value=5.5e-06 Score=87.79 Aligned_cols=147 Identities=11% Similarity=-0.020 Sum_probs=73.5
Q ss_pred cceEEEEEc-CCce-eEeCCC----CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCC
Q 002209 313 TTQLVLVSL-DGTV-KEIGPP----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPL 386 (953)
Q Consensus 313 ~~~l~~~~~-~g~~-~~l~~~----~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~ 386 (953)
...|.++|+ +|+. +.+..+ ..+...+|||||+.++..+.+.. ....-.+.....|.+||.+++....+.....
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~-~w~laSGs~D~tIklWd~~tgk~l~v~~~~~ 280 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA-KESESLRSPVFQLIVINPKTTLSVGVMLYCL 280 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC-cceeeccCCCcEEEEEECCCCEEEEEEEeec
Confidence 356778898 8863 445432 23344579999999876653211 1111123345688999998665432211000
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccC-Ceeecc
Q 002209 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYG-GISWCD 465 (953)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~-~~~~Sp 465 (953)
|. +.... -+..+.+|..++-. +..+.|.+||+ .++.....+..+...+. .++|||
T Consensus 281 ----p~---Gh~~~--~lsg~~sg~~lASg-------------S~DgTIkIWDl--~tGk~l~tL~gH~~~vvs~vafSP 336 (356)
T 2w18_A 281 ----PP---GQAGR--FLEGDVKDHCAAAI-------------LTSGTIAIWDL--LLGQCTALLPPVSDQHWSFVKWSG 336 (356)
T ss_dssp ----CT---TCCCC--EEEEEEETTEEEEE-------------ETTSCEEEEET--TTCSEEEEECCC--CCCCEEEECS
T ss_pred ----cC---CCcce--eEccccCCCEEEEE-------------cCCCcEEEEEC--CCCcEEEEecCCCCCeEEEEEECC
Confidence 00 00000 01111112222211 33557899997 33333344544444344 489999
Q ss_pred CCceEEEEEecccCceEEEEE
Q 002209 466 DSLALVYESWYKTRRTRTWVI 486 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~ 486 (953)
||++|+..+.+++ .+||.+
T Consensus 337 DG~~LaSGS~D~T--IklWd~ 355 (356)
T 2w18_A 337 TDSHLLAGQKDGN--IFVYHY 355 (356)
T ss_dssp SSSEEEEECTTSC--EEEEEE
T ss_pred CCCEEEEEECCCc--EEEecC
Confidence 9999998876553 367754
No 431
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.50 E-value=5.1e-08 Score=113.27 Aligned_cols=128 Identities=18% Similarity=0.137 Sum_probs=82.9
Q ss_pred EEEEEEcCCCCCCC-CCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc-CcEEEEcCCCCC-CCCCC
Q 002209 652 LSATLYLPPGYDPS-KDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPI-IGEGD 728 (953)
Q Consensus 652 ~~~~l~~P~~~~~~-~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V~~~~~~~~-~G~G~ 728 (953)
+...+|.|...... ...++|+|||+|||.+..+.. ..+. ...|+++ |++|+.++|+-. .|+..
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~--------~~~~------~~~la~~~~~vvv~~~YRl~~~Gfl~ 177 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTG--------NLYD------GSVLASYGNVIVITVNYRLGVLGFLS 177 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCG--------GGSC------CHHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCC--------CccC------chhhhccCCEEEEEeCCcCcccccCc
Confidence 45678888753211 123589999999986554322 1121 1245654 699999888621 12211
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCC---CcccEEEEcccC
Q 002209 729 EEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGA 793 (953)
Q Consensus 729 ~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~ 793 (953)
.......+...+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++.... .+|+.+|+.+|.
T Consensus 178 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 178 TGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 1111111245689999999999885 2379999999999999999998887543 469999998874
No 432
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.50 E-value=5.8e-07 Score=96.25 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=72.6
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCC-CCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSP-NEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~ 748 (953)
.|.||++||...... ..+. ..| ......|+++||.|+.+ +..|+|.+............++.++++
T Consensus 8 ~~~vVlvHG~~~~~~------~~~~~~~w----~~l~~~L~~~G~~V~~~---d~~g~g~s~~~~~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 8 RYPIILVHGLTGTDK------YAGVLEYW----YGIQEDLQQRGATVYVA---NLSGFQSDDGPNGRGEQLLAYVKTVLA 74 (320)
T ss_dssp SSCEEEECCTTCCSE------ETTTEESS----TTHHHHHHHTTCCEEEC---CCCSSCCSSSTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcc------ccchHHHH----HHHHHHHHhCCCEEEEE---cCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 567899999532110 0000 112 23566788999999994 446777664433334555555555554
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCC
Q 002209 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (953)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (953)
.+ +.+++.|+||||||.++..++.++|++++++|.+++..
T Consensus 75 ~~------~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 75 AT------GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HH------CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred Hh------CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 43 34689999999999999999999999999999998754
No 433
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.49 E-value=8.5e-06 Score=87.27 Aligned_cols=246 Identities=13% Similarity=0.082 Sum_probs=126.8
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecC-CeEEEEEecCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN-STLLVCTIPLLRGD 268 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspD-g~~l~~~~~~~~~~ 268 (953)
....++|++||+ |++..... .........|+++++.+++.+.+...........+..+.+++| |+.++..
T Consensus 19 ~~~~~~~~~~g~-l~~~~~~~-~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~------- 89 (314)
T 1pjx_A 19 GAEGPVFDKNGD-FYIVAPEV-EVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD------- 89 (314)
T ss_dssp TCEEEEECTTSC-EEEEETTC-EETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-------
T ss_pred CccCceECCCCC-EEEEEecc-ccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-------
Confidence 456799999995 55541000 0001124579999988888765543100000011557889999 7644432
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEe-CCC------CcccccccCC
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEI-GPP------AVYTSLDPSP 341 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l-~~~------~~~~~~~~Sp 341 (953)
....|++++.+|+.+.+ ... ..+..++++|
T Consensus 90 -------------------------------------------~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~ 126 (314)
T 1pjx_A 90 -------------------------------------------MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY 126 (314)
T ss_dssp -------------------------------------------TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECT
T ss_pred -------------------------------------------CCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECC
Confidence 11257778776665555 321 3466789999
Q ss_pred CCcEEEEEEecCC---ccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeec----cCCCCce
Q 002209 342 DEKYILISSIHRP---YSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR----SDKPSTL 414 (953)
Q Consensus 342 DG~~l~~~~~~~~---~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ws----pDg~~i~ 414 (953)
||+..+ +..... ..+..........|+.++.+ +..+.+.... .....++|+ |||+.++
T Consensus 127 ~g~l~v-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~~i~~~~~~d~dg~~l~ 191 (314)
T 1pjx_A 127 EGNLWI-TAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-------------QFPNGIAVRHMNDGRPYQLI 191 (314)
T ss_dssp TSCEEE-EECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-------------SSEEEEEEEECTTSCEEEEE
T ss_pred CCCEEE-EecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-------------CCcceEEEecccCCCCCEEE
Confidence 997544 432210 00000000112368888776 3333332110 122468899 9997554
Q ss_pred EEEEeccCCCcccccccCCeEEEEecCCCCCCCce---EEeecc----cccCCeeeccCCceEEEEEecccCceEEEEEc
Q 002209 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE---ILHKLD----LRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~---~l~~~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 487 (953)
+. + ...+.|++++. ...++.. .+.... .....+++++||+. +++...+ ..|++++
T Consensus 192 v~-~-----------~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l-~v~~~~~---~~i~~~d 253 (314)
T 1pjx_A 192 VA-E-----------TPTKKLWSYDI--KGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL-LVANWGS---SHIEVFG 253 (314)
T ss_dssp EE-E-----------TTTTEEEEEEE--EETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE-EEEEETT---TEEEEEC
T ss_pred EE-E-----------CCCCeEEEEEC--CCCCccccceEEEECCCCCCCCCCceEECCCCCE-EEEEcCC---CEEEEEc
Confidence 43 1 12457888875 1122211 121111 33456889999964 4433222 2688999
Q ss_pred CCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEe
Q 002209 488 PGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (953)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~ 528 (953)
.+++. ....+ ........+ +.++|||++|+...
T Consensus 254 ~~~g~-~~~~~-~~~~~~~~~------i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 254 PDGGQ-PKMRI-RCPFEKPSN------LHFKPQTKTIFVTE 286 (314)
T ss_dssp TTCBS-CSEEE-ECSSSCEEE------EEECTTSSEEEEEE
T ss_pred CCCCc-EeEEE-eCCCCCcee------EEECCCCCEEEEEe
Confidence 88542 22222 222122222 67899998776664
No 434
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.49 E-value=4.7e-07 Score=98.13 Aligned_cols=170 Identities=11% Similarity=0.004 Sum_probs=94.8
Q ss_pred HcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CCCcccE
Q 002209 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH---APHLFCC 786 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~---~p~~~~a 786 (953)
..+|.|+.++ ..|+|.+............++.+.+..+. ...++.++||||||.++..++.+ +|++++.
T Consensus 125 ~~~~~v~~~d---~~g~~~~~~~~~~~~~~a~~~~~~i~~~~-----~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~ 196 (329)
T 3tej_A 125 DPQWSIIGIQ---SPRPNGPMQTAANLDEVCEAHLATLLEQQ-----PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAF 196 (329)
T ss_dssp CTTCEEEEEC---CCTTTSHHHHCSSHHHHHHHHHHHHHHHC-----SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCeEEEee---CCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccE
Confidence 4689999954 45666654433344555655555544331 12589999999999999999998 9999999
Q ss_pred EEEcccCCCCC----CC-CcCccccc--------------------chhhhh-HHHHHhc-C--cccccCCCCCcEEEEE
Q 002209 787 GIARSGAYNRT----LT-PFGFQNED--------------------RTLWEA-TSTYVEM-S--PFMSANKLKKPILLVH 837 (953)
Q Consensus 787 ~v~~~~~~d~~----~~-~~~~~~~~--------------------~~~~~~-~~~~~~~-s--p~~~~~~i~~P~Li~~ 837 (953)
++++.+..... .. ...+.... ...... ...+... . .......+.+|++++.
T Consensus 197 lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 276 (329)
T 3tej_A 197 LGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFV 276 (329)
T ss_dssp EEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEE
T ss_pred EEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEE
Confidence 99887653210 00 00000000 000000 0011100 0 0011245678999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCCCccC-CCcccHHHHHHHHHHHH
Q 002209 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY-AARESIMHVLWETDRWL 894 (953)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~-~~~~~~~~~~~~i~~fl 894 (953)
|+.|..++ ......+. ..-..++++.+++ +|.. ...+....+...+.+||
T Consensus 277 ~~~d~~~~--~~~~~~w~----~~~~~~~~~~v~g-~H~~~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 277 AERTLQEG--MSPERAWS----PWIAELDIYRQDC-AHVDIISPGTFEKIGPIIRATL 327 (329)
T ss_dssp EGGGCCTT--CCHHHHHT----TTEEEEEEEEESS-CGGGGGSTTTHHHHHHHHHHHH
T ss_pred eccCCCCC--CCchhhHH----HhcCCcEEEEecC-ChHHhCCChHHHHHHHHHHHHh
Confidence 99998776 54333332 2223578888985 7863 23333344444555554
No 435
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.45 E-value=2.1e-05 Score=82.02 Aligned_cols=195 Identities=10% Similarity=-0.007 Sum_probs=107.5
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
....++++|||+ |+++.+ .....|++++..++....+....... ...+++++||+ |+++.
T Consensus 25 ~p~~i~~~~~g~-l~v~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~----p~~i~~~~~g~-l~v~~------- 84 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSE-------GMYGRVVKLATGSTGTTVLPFNGLYQ----PQGLAVDGAGT-VYVTD------- 84 (270)
T ss_dssp CEEEEEECTTCC-EEEEEC-------SSSCEEEEECC-----EECCCCSCCS----CCCEEECTTCC-EEEEE-------
T ss_pred CccceEECCCCC-EEEEcc-------CCCCcEEEecCCCcccceEeeCCcCC----cceeEECCCCC-EEEEc-------
Confidence 456678999997 544232 13568999998776554432211111 45788999998 55440
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC--CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~--~~~~~~~~SpDG~~l 346 (953)
....|++++. ++....+... .....++++|||+ |
T Consensus 85 ------------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 121 (270)
T 1rwi_B 85 ------------------------------------------FNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-V 121 (270)
T ss_dssp ------------------------------------------TTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-E
T ss_pred ------------------------------------------CCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-E
Confidence 1235778887 4444434322 4567889999997 4
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
+++... .+.|++++..+......... ....+..+++++||+ +|+.+.
T Consensus 122 ~v~~~~------------~~~i~~~~~~~~~~~~~~~~------------~~~~p~~i~~~~~g~--l~v~~~------- 168 (270)
T 1rwi_B 122 YVADRG------------NNRVVKLAAGSKTQTVLPFT------------GLNDPDGVAVDNSGN--VYVTDT------- 168 (270)
T ss_dssp EEEEGG------------GTEEEEECTTCCSCEECCCC------------SCCSCCCEEECTTCC--EEEEEG-------
T ss_pred EEEECC------------CCEEEEEECCCceeEeeccc------------cCCCceeEEEeCCCC--EEEEEC-------
Confidence 444311 12677776543322211110 012345789999996 444221
Q ss_pred cccccCCeEEEEecCCCCCCCceEEeecc-cccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
..+.|++++. ++.......... .....+++++|| .|+++...+ ..|++++.++.
T Consensus 169 ----~~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~---~~v~~~~~~~~ 223 (270)
T 1rwi_B 169 ----DNNRVVKLEA---ESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNT---NQVVKLLAGST 223 (270)
T ss_dssp ----GGTEEEEECT---TTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTT---SCEEEECTTCS
T ss_pred ----CCCEEEEEec---CCCceEeecccCCCCceEEEECCCC-CEEEEECCC---CcEEEEcCCCC
Confidence 2357888885 444333322111 334568999999 555554332 26888888764
No 436
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.45 E-value=6e-07 Score=91.68 Aligned_cols=156 Identities=10% Similarity=0.054 Sum_probs=84.3
Q ss_pred cEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CcccEEEE
Q 002209 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIA 789 (953)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~ 789 (953)
|.|+.++. .|+|.. ..|+.+.++.+. ...++.++|||+||.++..++.+.+ +.++.+|+
T Consensus 43 ~~v~~~d~---~g~~~~----------~~~~~~~i~~~~-----~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl 104 (230)
T 1jmk_C 43 YKLCAFDF---IEEEDR----------LDRYADLIQKLQ-----PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIM 104 (230)
T ss_dssp EEEEEECC---CCSTTH----------HHHHHHHHHHHC-----CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEecC---CCHHHH----------HHHHHHHHHHhC-----CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEE
Confidence 99999555 455432 234444444431 1257999999999999999987653 56888888
Q ss_pred cccCCCCCCCCcC---ccc----------ccc-----hhhhhH----HHHHhcCc-ccccCCCCCcEEEEEeCCCCCCCC
Q 002209 790 RSGAYNRTLTPFG---FQN----------EDR-----TLWEAT----STYVEMSP-FMSANKLKKPILLVHGEEDNNSGT 846 (953)
Q Consensus 790 ~~~~~d~~~~~~~---~~~----------~~~-----~~~~~~----~~~~~~sp-~~~~~~i~~P~Li~~G~~D~~v~~ 846 (953)
+++........+. ... ... ...... ..+..+.. ......+++|+++++|++|..++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~- 183 (230)
T 1jmk_C 105 VDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP- 183 (230)
T ss_dssp ESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC-
T ss_pred ECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc-
Confidence 7654321100000 000 000 000000 01111111 12346788999999999999875
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEeCCCCc--cCCCcccHHHHHHHHHHHH
Q 002209 847 LTMQSDRFFNALKGHGALCRLVILPFESH--GYAARESIMHVLWETDRWL 894 (953)
Q Consensus 847 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H--~~~~~~~~~~~~~~i~~fl 894 (953)
. ....+.+ .....++++.+++ +| .+ ..+....+.+.+.+||
T Consensus 184 -~-~~~~w~~---~~~~~~~~~~i~g-~H~~~~-~~~~~~~~~~~i~~~l 226 (230)
T 1jmk_C 184 -E-WLASWEE---ATTGAYRMKRGFG-THAEML-QGETLDRNAGILLEFL 226 (230)
T ss_dssp -T-TEECSGG---GBSSCEEEEECSS-CGGGTT-SHHHHHHHHHHHHHHH
T ss_pred -c-ccchHHH---hcCCCeEEEEecC-ChHHHc-CcHhHHHHHHHHHHHH
Confidence 2 2222211 1223578999998 99 54 3344444555555554
No 437
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.45 E-value=3.6e-05 Score=80.30 Aligned_cols=193 Identities=8% Similarity=-0.047 Sum_probs=112.6
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.....+++|||+ |+++. . ...|++++.+++....+....... ...+++.+||+ |+++.
T Consensus 68 ~p~~i~~~~~g~-l~v~~-------~--~~~i~~~d~~~~~~~~~~~~~~~~----p~~i~~~~~g~-l~v~~------- 125 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYVTD-------F--NNRVVTLAAGSNNQTVLPFDGLNY----PEGLAVDTQGA-VYVAD------- 125 (270)
T ss_dssp SCCCEEECTTCC-EEEEE-------T--TTEEEEECTTCSCCEECCCCSCSS----EEEEEECTTCC-EEEEE-------
T ss_pred CcceeEECCCCC-EEEEc-------C--CCEEEEEeCCCceEeeeecCCcCC----CcceEECCCCC-EEEEE-------
Confidence 567789999998 55532 1 458999998887655443221111 45788889997 44430
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC--CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~--~~~~~~~~SpDG~~l 346 (953)
.....|++++. +......... .....++++|||+ |
T Consensus 126 -----------------------------------------~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 163 (270)
T 1rwi_B 126 -----------------------------------------RGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-V 163 (270)
T ss_dssp -----------------------------------------GGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-E
T ss_pred -----------------------------------------CCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-E
Confidence 02245777766 3333322222 4567889999997 4
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
.++... ...|++++.++........... ..+..+++++|| .+ |+.+
T Consensus 164 ~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~d~~g-~l-~v~~-------- 209 (270)
T 1rwi_B 164 YVTDTD------------NNRVVKLEAESNNQVVLPFTDI------------TAPWGIAVDEAG-TV-YVTE-------- 209 (270)
T ss_dssp EEEEGG------------GTEEEEECTTTCCEEECCCSSC------------CSEEEEEECTTC-CE-EEEE--------
T ss_pred EEEECC------------CCEEEEEecCCCceEeecccCC------------CCceEEEECCCC-CE-EEEE--------
Confidence 444321 2378899988765443222110 234578999998 33 3322
Q ss_pred cccccCCeEEEEecCCCCCCCceEEee-cccccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
...+.|++++. ++.....+.. .......+++++||+ |+++...+ . +|.+++...
T Consensus 210 ---~~~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~-~--~v~~~~~~~ 264 (270)
T 1rwi_B 210 ---HNTNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN-D--RVVKLTSLE 264 (270)
T ss_dssp ---TTTSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG-T--EEEEECCCG
T ss_pred ---CCCCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCC-EEEEECCC-C--EEEEEcCCC
Confidence 12446888884 4444333322 123456789999996 55554332 3 688887665
No 438
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.43 E-value=6.3e-05 Score=83.14 Aligned_cols=188 Identities=11% Similarity=0.031 Sum_probs=120.7
Q ss_pred cceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccC
Q 002209 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDI 390 (953)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~ 390 (953)
...|+++++ ++....+... .....++|+++++.|+++... ...|+.++++++..+.+.....
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~---- 158 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL---- 158 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCCEEEEECSSC----
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCC------------CCcEEEEecCCCCcEEEEeCCC----
Confidence 356888998 5555555544 667789999988888877522 2479999999876655543211
Q ss_pred CccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec-ccccCCeeeccCCce
Q 002209 391 PIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSLA 469 (953)
Q Consensus 391 p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~-~~~~~~~~~SpDg~~ 469 (953)
..+..+++.+.+..|++. +. ....|+++++ +|...+.+... ......+++.|++..
T Consensus 159 --------~~p~glavd~~~g~lY~~-d~-----------~~~~I~~~~~---dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 159 --------ESPGGLAVDWVHDKLYWT-DS-----------GTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp --------SCCCCEEEETTTTEEEEE-ET-----------TTTEEEECBT---TSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred --------CCccEEEEEeCCCeEEEE-cC-----------CCCeEEEEeC---CCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 123467888777655443 22 2457888885 66555555432 234567899999999
Q ss_pred EEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCC
Q 002209 470 LVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEG 549 (953)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (953)
|+++.+... .+|+++++++. ....+.........+ ++++|+++.|++...
T Consensus 216 ly~td~~~~--~~I~r~~~dG~--~~~~~~~~~~~~PnG------lavd~~~~~lY~aD~-------------------- 265 (386)
T 3v65_B 216 IYWTDWGNT--PRIEASSMDGS--GRRIIADTHLFWPNG------LTIDYAGRRMYWVDA-------------------- 265 (386)
T ss_dssp EEEEECSSS--CEEEEEETTSC--SCEEEECSSCSCEEE------EEEEGGGTEEEEEET--------------------
T ss_pred EEEeccCCC--CEEEEEeCCCC--CcEEEEECCCCCeee------EEEeCCCCEEEEEEC--------------------
Confidence 998865542 48999999874 334443322221122 788988888887752
Q ss_pred CCCeEEEEECCCCceEEEec
Q 002209 550 NIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 550 ~~~~L~~~d~~~~~~~~l~~ 569 (953)
....|+++|+++...+.+..
T Consensus 266 ~~~~I~~~d~dG~~~~~~~~ 285 (386)
T 3v65_B 266 KHHVIERANLDGSHRKAVIS 285 (386)
T ss_dssp TTTEEEEECTTSCSCEEEEC
T ss_pred CCCEEEEEeCCCCeeEEEEE
Confidence 12358899988765555543
No 439
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.43 E-value=4.6e-05 Score=85.00 Aligned_cols=201 Identities=11% Similarity=0.029 Sum_probs=120.6
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
....++|+|||+ |+++.. ....|+++++++++...+...... .. ++|+|+|+.|+++..
T Consensus 132 ~P~~la~d~~g~-lyv~d~--------~~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~~l~~~d~------ 190 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQR--------DDPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQRVYSIGW------ 190 (409)
T ss_dssp CEEEEEECSTTE-EEEEET--------TTTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSSEEEEEBS------
T ss_pred CceEEEEeCCCC-EEEEec--------CCCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCCcEEEEec------
Confidence 456778999997 554321 356899999998887766543321 33 899999998887610
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCc-eeEe----C-CCCcccccccCCC
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEI----G-PPAVYTSLDPSPD 342 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~-~~~l----~-~~~~~~~~~~SpD 342 (953)
. +...|++++. ++. .+.+ . .......++++|+
T Consensus 191 --------------------------------~---------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 191 --------------------------------E---------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp --------------------------------S---------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred --------------------------------C---------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 0 1126888888 443 3344 2 2256678999997
Q ss_pred CcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCcc-ceeeccCCCCceEEEEecc
Q 002209 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMR-SINWRSDKPSTLYWAETQD 421 (953)
Q Consensus 343 G~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~wspDg~~i~~~~~~~~ 421 (953)
+.+|++.. . .+.|+++|.+++....+........ ....+. .++|+|++..+++. +
T Consensus 230 ~g~lyv~d-~------------~~~I~~~d~~~~~~~~~~~~~~~g~-------~~~~P~~~ia~~p~~g~lyv~-d--- 285 (409)
T 3hrp_A 230 EEWLYFVD-S------------NKNFGRFNVKTQEVTLIKQLELSGS-------LGTNPGPYLIYYFVDSNFYMS-D--- 285 (409)
T ss_dssp SSEEEEEC-T------------TCEEEEEETTTCCEEEEEECCCCSC-------CCCSSCCEEEEETTTTEEEEE-E---
T ss_pred CCeEEEEE-C------------CCcEEEEECCCCCEEEEecccccCC-------CCCCccccEEEeCCCCEEEEE-e---
Confidence 66777743 1 2379999998766554422111000 001123 79999976655443 2
Q ss_pred CCCcccccccCCeEEEEecCCCCCCCceEEeecc---------------cccCCeeeccCCceEEEEEecccCceEEEEE
Q 002209 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---------------LRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (953)
Q Consensus 422 ~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~---------------~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~ 486 (953)
.....|++++. ++. ...+.... ....++++++||+ |+++..... .+|+++
T Consensus 286 --------~~~~~I~~~~~---~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~--~~I~~~ 350 (409)
T 3hrp_A 286 --------QNLSSVYKITP---DGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKG--YCLRKL 350 (409)
T ss_dssp --------TTTTEEEEECT---TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTT--CEEEEE
T ss_pred --------CCCCEEEEEec---CCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCC--CEEEEE
Confidence 23457888884 433 33332221 1234589999998 555533032 379999
Q ss_pred cCCCC
Q 002209 487 SPGSK 491 (953)
Q Consensus 487 d~~~~ 491 (953)
++.++
T Consensus 351 ~~~~G 355 (409)
T 3hrp_A 351 DILDG 355 (409)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 96554
No 440
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.43 E-value=3.9e-07 Score=102.40 Aligned_cols=108 Identities=11% Similarity=-0.137 Sum_probs=76.7
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCCCCChhhh--hhhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~ 746 (953)
.|+||++||+... ....+.......|++ .||.|+.+ |.+|+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~~-------------~~~~w~~~l~~~l~~~~~~~Vi~~---D~~G~G~S~~~~~~~~~~~~~~dl~~l 133 (452)
T 1bu8_A 70 RKTRFIVHGFIDK-------------GEDGWLLDMCKKMFQVEKVNCICV---DWRRGSRTEYTQASYNTRVVGAEIAFL 133 (452)
T ss_dssp SEEEEEECCSCCT-------------TCTTHHHHHHHHHHTTCCEEEEEE---ECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-------------CCchHHHHHHHHHHhhCCCEEEEE---echhcccCchhHhHhhHHHHHHHHHHH
Confidence 6899999996421 101111112345555 49999994 45676665422 12234567788888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+++|.++..++.+++.|+||||||.+|+.++.++|+++++++.+.|.
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1bu8_A 134 VQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA 180 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCC
Confidence 99987654455689999999999999999999999999999998775
No 441
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.42 E-value=2.7e-05 Score=82.18 Aligned_cols=120 Identities=14% Similarity=0.189 Sum_probs=69.4
Q ss_pred ceEEEEEcCCc-eeEeCC--C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCccc
Q 002209 314 TQLVLVSLDGT-VKEIGP--P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAED 389 (953)
Q Consensus 314 ~~l~~~~~~g~-~~~l~~--~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~ 389 (953)
..|++++.+|+ ...+.. . .....++++|||+ |+++... ...|++|+.++.....+.....
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g~--- 205 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR------------AHCVKVFNYEGQYLRQIGGEGI--- 205 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG------------GTEEEEEETTCCEEEEESCTTT---
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC------------CCEEEEEcCCCCEEEEEccCCc---
Confidence 45777777553 333321 2 4567889999998 4444311 2379999998776655543110
Q ss_pred CCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCC-eEEEEecCCCCCCCceEEeeccc--ccCCeeeccC
Q 002209 390 IPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRD-IIYTQQAEPVQGEGPEILHKLDL--RYGGISWCDD 466 (953)
Q Consensus 390 ~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~-~l~~~d~~~~~g~~~~~l~~~~~--~~~~~~~SpD 466 (953)
...+..+++++||+ +++. . ...+ .|.+++. ++.....+..... ....++++||
T Consensus 206 --------~~~p~~i~~d~~G~-l~v~-~-----------~~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 206 --------TNYPIGVGINSNGE-ILIA-D-----------NHNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp --------SCSEEEEEECTTCC-EEEE-E-----------CSSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred --------cCCCcEEEECCCCC-EEEE-e-----------CCCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECCC
Confidence 12345789999995 3332 1 1233 7888884 5444444433322 2346899999
Q ss_pred CceEEEEE
Q 002209 467 SLALVYES 474 (953)
Q Consensus 467 g~~l~~~~ 474 (953)
|+ |+++.
T Consensus 262 g~-l~vs~ 268 (286)
T 1q7f_A 262 GS-VVLAS 268 (286)
T ss_dssp TE-EEEEE
T ss_pred Cc-EEEEC
Confidence 97 44443
No 442
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.42 E-value=1.2e-06 Score=92.15 Aligned_cols=118 Identities=14% Similarity=-0.040 Sum_probs=76.2
Q ss_pred EEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhh
Q 002209 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA 731 (953)
Q Consensus 652 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~ 731 (953)
+...++.|.. .+.. ..+.||++||.... ....|.......|.++||.|+.++. .|+|.+.
T Consensus 50 L~~~i~~p~~-~~~~--~~~pVVLvHG~~~~-------------~~~~w~~~l~~~L~~~Gy~V~a~Dl---pG~G~~~- 109 (316)
T 3icv_A 50 LDAGLTCQGA-SPSS--VSKPILLVPGTGTT-------------GPQSFDSNWIPLSAQLGYTPCWISP---PPFMLND- 109 (316)
T ss_dssp HHHTEEETTB-BTTB--CSSEEEEECCTTCC-------------HHHHHTTTHHHHHHHTTCEEEEECC---TTTTCSC-
T ss_pred HhhhEeCCCC-CCCC--CCCeEEEECCCCCC-------------cHHHHHHHHHHHHHHCCCeEEEecC---CCCCCCc-
Confidence 4445556643 2222 24568889995211 0001111345678889999999555 4555432
Q ss_pred hhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCcccEEEEcccCCC
Q 002209 732 NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFCCGIARSGAYN 795 (953)
Q Consensus 732 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~~~~d 795 (953)
.....+++.+.++.+.+... .+++.|+||||||.++.+++.++ +++++.+|++++...
T Consensus 110 ----~~~~~~~la~~I~~l~~~~g--~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 110 ----TQVNTEYMVNAITTLYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp ----HHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred ----HHHHHHHHHHHHHHHHHHhC--CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 23345566777777766532 36899999999999998877765 589999999998755
No 443
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.41 E-value=1e-05 Score=91.66 Aligned_cols=260 Identities=13% Similarity=0.012 Sum_probs=131.5
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEe-c-cCCCeEEEEEeecc--------c-cCCCCcceEEEEECCCCcee
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTW-S-QDGKHLAFSIRIDA--------E-DSSSSKLRVWVADVDTGKAR 232 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~w-S-PDG~~laf~~~~~~--------~-~~~~~~~~l~~~d~~~g~~~ 232 (953)
.|.+.|+.+ .+...+..++.+......++ + ||+++|+...+... . ........+-++|.++.+..
T Consensus 113 rVavIdl~t----~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 113 RVARVRCDV----MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp EEEEEETTT----TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred EEEEEECCC----ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE
Confidence 467888744 44444445665555666666 5 99999855432110 0 01223557889999987643
Q ss_pred -ecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCc-cccch-hhhhhcCCcchhhhhh
Q 002209 233 -PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRD-IIQVR-TFQDLLKDEYDEDLFD 309 (953)
Q Consensus 233 -~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~d~~~~~ 309 (953)
++.-..+ ...++.+|||++++++.......... . .....+... ....+ ..... -.+++..
T Consensus 189 ~qI~Vgg~------pd~~~~spdGk~~~vt~~~se~~~~i-~------~~~~~~~d~v~V~~~~~~~~~---v~~Gk~~- 251 (595)
T 1fwx_A 189 WQVLVSGN------LDNCDADYEGKWAFSTSYNSEKGMTL-P------EMTAAEMDHIVVFNIAEIEKA---IAAGDYQ- 251 (595)
T ss_dssp EEEEESSC------CCCEEECSSSSEEEEEESCTTCCSSH-H------HHTCCSEEEEEEEEHHHHHHH---HHHTCSE-
T ss_pred EEEEeCCC------ccceEECCCCCEEEEEecCcccCcch-h------hccccccceEEEeeccceeEe---ccCCCee-
Confidence 3322122 44788999999999885432221000 0 000000000 00000 00000 0111111
Q ss_pred hhccceEEEEEc-C--Cce--eEeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEE---Ee
Q 002209 310 YYATTQLVLVSL-D--GTV--KEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR---EL 381 (953)
Q Consensus 310 ~~~~~~l~~~~~-~--g~~--~~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~---~l 381 (953)
.-+.+.++|. + ++. ..+..+.....+.+|||||+++.+.. ....+.++|++..+.. .|
T Consensus 252 --~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~------------~s~~VsVid~~~~~~~~~~~l 317 (595)
T 1fwx_A 252 --ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGK------------LSPTVTVLDVTRFDAVFYENA 317 (595)
T ss_dssp --EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECT------------TSSBEEEEEGGGHHHHHHSCC
T ss_pred --EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCC------------CCCeEEEEECccccccccccc
Confidence 1134778888 5 432 34443355678899999999887752 2348999999843100 00
Q ss_pred ccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCC----CCCC-ceEEeecc-
Q 002209 382 CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPV----QGEG-PEILHKLD- 455 (953)
Q Consensus 382 ~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~----~g~~-~~~l~~~~- 455 (953)
.... ..........+++.++|+||| .+|.+... .+++..|+++.. .|.+ ...+..-+
T Consensus 318 ~~~~----~v~~~v~vG~gP~h~aF~~dG--~aY~t~~l-----------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV 380 (595)
T 1fwx_A 318 DPRS----AVVAEPELGLGPLHTAFDGRG--NAYTSLFL-----------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDV 380 (595)
T ss_dssp CGGG----GEEECCBCCSCEEEEEECTTS--EEEEEETT-----------TTEEEEEEHHHHHHHHHTCSCCCEEEEEEC
T ss_pred Cccc----ceEEEcCCCCCcceEEECCCC--eEEEEEec-----------CCcEEEEEhhHhhhhhcccccceeEEEeec
Confidence 0000 000000122467789999999 46764443 346777775210 1111 11221111
Q ss_pred -------cccCCeeeccCCceEEEEEe
Q 002209 456 -------LRYGGISWCDDSLALVYESW 475 (953)
Q Consensus 456 -------~~~~~~~~SpDg~~l~~~~~ 475 (953)
....+...+|||++|+....
T Consensus 381 ~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 381 HYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp SSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ccccccceeccceEeCCCCCEEEEcCC
Confidence 11134678999999877653
No 444
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.40 E-value=1.3e-05 Score=86.74 Aligned_cols=121 Identities=13% Similarity=0.086 Sum_probs=67.3
Q ss_pred cccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc-CceEEEeccCCCcccCCccccccccCccceeeccCCC
Q 002209 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (953)
Q Consensus 333 ~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~-g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~ 411 (953)
....++++||+..|+++... ...|.+|+.+ |...+.+..... ...+..++|+| |
T Consensus 197 ~p~gia~d~~~g~l~v~d~~------------~~~I~~~~~~~G~~~~~~~~~~~-----------~~~~~~~~~~p-g- 251 (329)
T 3fvz_A 197 VPHSLALVPHLDQLCVADRE------------NGRIQCFKTDTKEFVREIKHASF-----------GRNVFAISYIP-G- 251 (329)
T ss_dssp CEEEEEEETTTTEEEEEETT------------TTEEEEEETTTCCEEEEECCTTT-----------TTCEEEEEEET-T-
T ss_pred CCcEEEEECCCCEEEEEECC------------CCEEEEEECCCCcEEEEEecccc-----------CCCcceeeecC-C-
Confidence 35678999996667666522 3479999998 655555543211 12345678888 3
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE-Ee---ecccccCCeeeccCCceEEEEEecccCceEEEEEc
Q 002209 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LH---KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (953)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~-l~---~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d 487 (953)
++|..+.. . .........+++++. ..++... +. ........++++||| .|+.+...+ . +|++++
T Consensus 252 -~~~~~~g~---~-~v~~~~~~~v~~~~~---~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~-~--~I~~~~ 319 (329)
T 3fvz_A 252 -FLFAVNGK---P-YFGDQEPVQGFVMNF---SSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHT-N--TVWKFT 319 (329)
T ss_dssp -EEEEEECC---C-CTTCSCCCCEEEEET---TTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSS-C--CEEEEE
T ss_pred -EEEEeCCC---E-EeccCCCcEEEEEEc---CCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCC-C--EEEEEe
Confidence 44443211 1 111133457888885 3343332 22 122234568999999 555554332 2 577766
Q ss_pred CCC
Q 002209 488 PGS 490 (953)
Q Consensus 488 ~~~ 490 (953)
+++
T Consensus 320 ~~~ 322 (329)
T 3fvz_A 320 LTE 322 (329)
T ss_dssp EEE
T ss_pred CCc
Confidence 554
No 445
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.40 E-value=2.8e-05 Score=81.97 Aligned_cols=201 Identities=8% Similarity=0.044 Sum_probs=111.8
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCC-ccccccccceEEe-cCCeEEEEEecCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWV-NNSTLLVCTIPLLRG 267 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~ws-pDg~~l~~~~~~~~~ 267 (953)
....++++|||+ |+++.. ....|++++.++...+.+..... .........++++ ++|+.++...
T Consensus 31 ~p~~v~~~~~g~-l~v~~~--------~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~----- 96 (286)
T 1q7f_A 31 EPSGVAVNAQND-IIVADT--------NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER----- 96 (286)
T ss_dssp CEEEEEECTTCC-EEEEEG--------GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC-----
T ss_pred CCceEEECCCCC-EEEEEC--------CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC-----
Confidence 456778999997 444321 25679999988654444422110 0000113467774 6665444320
Q ss_pred CCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCc-eeEeCCC--CcccccccCCCCc
Q 002209 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGPP--AVYTSLDPSPDEK 344 (953)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~-~~~l~~~--~~~~~~~~SpDG~ 344 (953)
. ....|++++.+|+ .+.+... .....++++|||+
T Consensus 97 ----------------------------------~---------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~ 133 (286)
T 1q7f_A 97 ----------------------------------S---------PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR 133 (286)
T ss_dssp ----------------------------------G---------GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC
T ss_pred ----------------------------------C---------CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC
Confidence 0 1245777777554 3334322 4567889999997
Q ss_pred EEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCC
Q 002209 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (953)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~ 424 (953)
|+++... ...|++|+.++...+.+..... ...+..++++|||+ +|.++
T Consensus 134 -l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~-----------~~~p~~i~~~~~g~--l~v~~------ 181 (286)
T 1q7f_A 134 -IIVVECK------------VMRVIIFDQNGNVLHKFGCSKH-----------LEFPNGVVVNDKQE--IFISD------ 181 (286)
T ss_dssp -EEEEETT------------TTEEEEECTTSCEEEEEECTTT-----------CSSEEEEEECSSSE--EEEEE------
T ss_pred -EEEEECC------------CCEEEEEcCCCCEEEEeCCCCc-----------cCCcEEEEECCCCC--EEEEE------
Confidence 4444311 2379999988766555432110 12345789999997 34422
Q ss_pred cccccccCCeEEEEecCCCCCCCceEEeec--ccccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 425 ~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
...+.|++++. ++.....+... ......+++++||+ |+++...+. .+|.+++.++
T Consensus 182 -----~~~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~--~~i~~~~~~g 238 (286)
T 1q7f_A 182 -----NRAHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNN--FNLTIFTQDG 238 (286)
T ss_dssp -----GGGTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSS--CEEEEECTTS
T ss_pred -----CCCCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCC--EEEEEECCCC
Confidence 22457888884 44333333222 12345689999996 444433221 2688888665
No 446
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.39 E-value=5.7e-07 Score=101.05 Aligned_cols=108 Identities=11% Similarity=-0.061 Sum_probs=75.9
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHc-CcEEEEcCCCCCCCCCChhhh--hhhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~ 746 (953)
.|+||++||.... ....+.......|+++ ||.|+.+| ..|+|.+... ........+|+.++
T Consensus 70 ~p~vvliHG~~~~-------------~~~~w~~~~~~~l~~~~~~~Vi~~D---~~g~G~S~~~~~~~~~~~~~~dl~~~ 133 (452)
T 1w52_X 70 RKTHFVIHGFRDR-------------GEDSWPSDMCKKILQVETTNCISVD---WSSGAKAEYTQAVQNIRIVGAETAYL 133 (452)
T ss_dssp SCEEEEECCTTCC-------------SSSSHHHHHHHHHHTTSCCEEEEEE---CHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCC-------------CCchHHHHHHHHHHhhCCCEEEEEe---cccccccccHHHHHhHHHHHHHHHHH
Confidence 5889999996311 1011112234455554 99999954 4566665322 12234556788888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+++|.+...++.+++.|+||||||.+|+.++.++|++++.++...|.
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1w52_X 134 IQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPA 180 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccc
Confidence 88887543345679999999999999999999999999999998775
No 447
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.36 E-value=7.6e-05 Score=82.49 Aligned_cols=180 Identities=11% Similarity=0.081 Sum_probs=117.8
Q ss_pred cceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhh
Q 002209 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (953)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (953)
...|+++++++++...+...... ...++|.+.+..|+++..
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~-----~~gl~~d~~~~~ly~~D~---------------------------------- 135 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSDV---------------------------------- 135 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSC-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred CccceeeccCCCcEEEEecCCCc-----cEEEEEecCCCeEEEEeC----------------------------------
Confidence 45799999998776655443222 557899988878887610
Q ss_pred hcCCcchhhhhhhhccceEEEEEc-CCceeEe-CCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc
Q 002209 298 LLKDEYDEDLFDYYATTQLVLVSL-DGTVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (953)
Q Consensus 298 ~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l-~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 374 (953)
....|+++++ ++..+.+ ... .....+++.+.+..|+++... ...|++++++
T Consensus 136 --------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~------------~~~I~~~~~d 189 (386)
T 3v65_B 136 --------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLD 189 (386)
T ss_dssp --------------TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT------------TTEEEECBTT
T ss_pred --------------CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC------------CCeEEEEeCC
Confidence 2357889998 4444443 333 456678888888888877522 2378888888
Q ss_pred CceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec
Q 002209 375 GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL 454 (953)
Q Consensus 375 g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~ 454 (953)
|+..+.+..... ..++.+++.|++..| ||++.. ....|++++. +|...+.+...
T Consensus 190 g~~~~~l~~~~l------------~~P~giavdp~~g~l-y~td~~----------~~~~I~r~~~---dG~~~~~~~~~ 243 (386)
T 3v65_B 190 GAHRKVLLWQSL------------EKPRAIALHPMEGTI-YWTDWG----------NTPRIEASSM---DGSGRRIIADT 243 (386)
T ss_dssp SCSCEEEECSSC------------SCEEEEEEETTTTEE-EEEECS----------SSCEEEEEET---TSCSCEEEECS
T ss_pred CCceEEeecCCC------------CCCcEEEEEcCCCeE-EEeccC----------CCCEEEEEeC---CCCCcEEEEEC
Confidence 766555443211 234578899877654 553321 1357999985 66555555433
Q ss_pred -ccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 455 -DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 455 -~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
.....+++|+|+++.|+++.... .+|+.++.++.
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD~~~---~~I~~~d~dG~ 278 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGS 278 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEETTT---TEEEEECTTSC
T ss_pred CCCCeeeEEEeCCCCEEEEEECCC---CEEEEEeCCCC
Confidence 23356799999999999885433 38999998874
No 448
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.35 E-value=0.00016 Score=78.57 Aligned_cols=188 Identities=11% Similarity=0.031 Sum_probs=119.2
Q ss_pred cceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccC
Q 002209 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDI 390 (953)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~ 390 (953)
...|+++++ +.....+... .....++|+++++.|+++... ...|+.++++++..+.+.....
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~---- 115 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL---- 115 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC----
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEecc------------CCceEEEecCCCCceEEEeCCC----
Confidence 356888888 4455555444 667788999988888877522 2479999998876555433211
Q ss_pred CccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec-ccccCCeeeccCCce
Q 002209 391 PIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSLA 469 (953)
Q Consensus 391 p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~-~~~~~~~~~SpDg~~ 469 (953)
..+..+++.+.+..|++. + ...+.|+++++ +|...+.+... ......+++.|++..
T Consensus 116 --------~~p~glavd~~~g~ly~~-d-----------~~~~~I~~~~~---dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 116 --------ESPGGLAVDWVHDKLYWT-D-----------SGTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp --------SCCCEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred --------CCccEEEEecCCCeEEEE-c-----------CCCCeEEEEcC---CCCceEEEEeCCCCCcceEEEecCcCe
Confidence 123467888776655443 2 22457888885 66555555432 234567899999999
Q ss_pred EEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCCCCC
Q 002209 470 LVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEG 549 (953)
Q Consensus 470 l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (953)
|+++.+... .+|+++++++. ..+.+.........+ ++++|+++.|++...
T Consensus 173 ly~td~~~~--~~I~r~~~dG~--~~~~~~~~~~~~PnG------la~d~~~~~lY~aD~-------------------- 222 (349)
T 3v64_C 173 IYWTDWGNT--PRIEASSMDGS--GRRIIADTHLFWPNG------LTIDYAGRRMYWVDA-------------------- 222 (349)
T ss_dssp EEEEECSSS--CEEEEEETTSC--SCEESCCSSCSCEEE------EEEETTTTEEEEEET--------------------
T ss_pred EEEeccCCC--CEEEEEeCCCC--CcEEEEECCCCCcce------EEEeCCCCEEEEEEC--------------------
Confidence 998876542 48999999874 334433222211112 788998888887752
Q ss_pred CCCeEEEEECCCCceEEEec
Q 002209 550 NIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 550 ~~~~L~~~d~~~~~~~~l~~ 569 (953)
....|+++|+++...+.+..
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~ 242 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVIS 242 (349)
T ss_dssp TTTEEEEEETTSCSCEEEEC
T ss_pred CCCEEEEEeCCCCceEEEEe
Confidence 12358999988765555443
No 449
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.35 E-value=6.8e-05 Score=81.00 Aligned_cols=235 Identities=6% Similarity=-0.025 Sum_probs=121.3
Q ss_pred ceEEEEEc-CCceeEeCC-C--CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCc--eEEEeccCCCc
Q 002209 314 TQLVLVSL-DGTVKEIGP-P--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FVRELCDLPLA 387 (953)
Q Consensus 314 ~~l~~~~~-~g~~~~l~~-~--~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~--~~~~l~~~~~~ 387 (953)
..|+++|. +|+...... . .....++++|||+ |+++... ...|++|+.+++ ....+......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~------------~~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVA------------LHQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETT------------TTEEEEECTTCSSCCSEEESBTTBC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECC------------CCEEEEEeCCCCeEEEEEecccCCC
Confidence 57889998 787654432 2 4567889999999 4444311 237999998876 33433221100
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecc----------cc
Q 002209 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD----------LR 457 (953)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~----------~~ 457 (953)
. ........+..++++|++..+++. +. .....|++++. +|.....+.... ..
T Consensus 136 g----~~~~~~~~P~~ia~~~~~g~lyv~-d~----------~~~~~I~~~~~---~g~~~~~~~~~g~~~~~~~~~~~~ 197 (329)
T 3fvz_A 136 G----SDQNHFCQPTDVAVEPSTGAVFVS-DG----------YCNSRIVQFSP---SGKFVTQWGEESSGSSPRPGQFSV 197 (329)
T ss_dssp C----CSTTCCSSEEEEEECTTTCCEEEE-EC----------SSCCEEEEECT---TSCEEEEECEECCSSSCCTTEESC
T ss_pred C----CCccccCCCcEEEEeCCCCeEEEE-eC----------CCCCeEEEEcC---CCCEEEEeccCCCCCCCCCcccCC
Confidence 0 000111245679999943334443 21 02457888874 444333332111 11
Q ss_pred cCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeec-C-CCccccCCCCCCCeEeccCCCEEEEEeeeccCCC
Q 002209 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD-R-SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEG 535 (953)
Q Consensus 458 ~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~ 535 (953)
..+++++||+..|+++...+ .+|.+++.+++ +...... . .....+. +.++| |. ++...+.
T Consensus 198 p~gia~d~~~g~l~v~d~~~---~~I~~~~~~~G--~~~~~~~~~~~~~~~~~------~~~~p-g~--~~~~~g~---- 259 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADREN---GRIQCFKTDTK--EFVREIKHASFGRNVFA------ISYIP-GF--LFAVNGK---- 259 (329)
T ss_dssp EEEEEEETTTTEEEEEETTT---TEEEEEETTTC--CEEEEECCTTTTTCEEE------EEEET-TE--EEEEECC----
T ss_pred CcEEEEECCCCEEEEEECCC---CEEEEEECCCC--cEEEEEeccccCCCcce------eeecC-CE--EEEeCCC----
Confidence 45689999966676664333 37888888754 2222221 1 1111111 56777 32 2222110
Q ss_pred cEEEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEE
Q 002209 536 TYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQS 615 (953)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~ 615 (953)
++ ........+++||..+++....+..... .+.... ..++++|| .+++..... ..|++++
T Consensus 260 --~~------v~~~~~~~v~~~~~~~g~~~~~~~~~~~-~~~~p~-------~ia~~~dG-~lyvad~~~---~~I~~~~ 319 (329)
T 3fvz_A 260 --PY------FGDQEPVQGFVMNFSSGEIIDVFKPVRK-HFDMPH-------DIVASEDG-TVYIGDAHT---NTVWKFT 319 (329)
T ss_dssp --CC------TTCSCCCCEEEEETTTCCEEEEECCSSS-CCSSEE-------EEEECTTS-EEEEEESSS---CCEEEEE
T ss_pred --EE------eccCCCcEEEEEEcCCCeEEEEEcCCCC-ccCCee-------EEEECCCC-CEEEEECCC---CEEEEEe
Confidence 11 1111234599999988887766542211 111111 24678888 555544432 2466666
Q ss_pred CC
Q 002209 616 WP 617 (953)
Q Consensus 616 ~~ 617 (953)
+.
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 450
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.34 E-value=2.2e-06 Score=90.55 Aligned_cols=103 Identities=15% Similarity=-0.009 Sum_probs=69.5
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~ 749 (953)
.|.||++||...... . .+...| ......|.++||.|+.++. .|+|.+.. .......|+.++++.
T Consensus 7 ~~~vvlvHG~~~~~~-----~-~~~~~~----~~~~~~L~~~G~~v~~~d~---~g~g~s~~---~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 7 KYPIVLAHGMLGFDN-----I-LGVDYW----FGIPSALRRDGAQVYVTEV---SQLDTSEV---RGEQLLQQVEEIVAL 70 (285)
T ss_dssp SSCEEEECCTTCCSE-----E-TTEESS----TTHHHHHHHTTCCEEEECC---CSSSCHHH---HHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCCcc-----c-cccccH----HHHHHHHHhCCCEEEEEeC---CCCCCchh---hHHHHHHHHHHHHHH
Confidence 577899999532110 0 000112 2345678899999999554 57776531 234445555554444
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCC
Q 002209 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (953)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (953)
+ +.+++.|+||||||.++..++.++|+.++++|.+++..
T Consensus 71 ~------~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 S------GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp H------CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h------CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 3 34689999999999999999999999999999998853
No 451
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.33 E-value=0.00022 Score=76.43 Aligned_cols=188 Identities=11% Similarity=0.074 Sum_probs=114.8
Q ss_pred cceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC----ceEEEeccCCC
Q 002209 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPL 386 (953)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g----~~~~~l~~~~~ 386 (953)
...|.++++ +++...+... .....++|+++++.|+++... ...|+.+++++ +....+....
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~------------~~~I~~~~~~g~~~~~~~~~~~~~~- 75 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD- 75 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSS-
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC------------CCcEEEEECCCCCCCcccEEEEeCC-
Confidence 356889999 5555444433 667789999998888887632 24788898886 3323222111
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee-cccccCCeeecc
Q 002209 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCD 465 (953)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~-~~~~~~~~~~Sp 465 (953)
...+..+++.+.+..| ||++. ..+.|.++++ +|...+.+.. .......++..|
T Consensus 76 -----------~~~p~glavd~~~~~l-y~~d~-----------~~~~I~~~~~---~g~~~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 76 -----------IQAPDGLAVDWIHSNI-YWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp -----------CSCCCEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEEET
T ss_pred -----------CCCcCEEEEeecCCeE-EEEEC-----------CCCEEEEEeC---CCCceEEEEECCCCCcceEEeCC
Confidence 0223567888766654 44322 2457888885 6655555543 234456789999
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCC
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (953)
+++.|+++.+... .+|+++++++. ..+.+.........+ ++++++++.|++....
T Consensus 130 ~~g~ly~~d~~~~--~~I~~~~~dG~--~~~~~~~~~~~~P~g------la~d~~~~~lY~~D~~--------------- 184 (316)
T 1ijq_A 130 VHGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDSK--------------- 184 (316)
T ss_dssp TTTEEEEEECSSS--CEEEEEETTSC--CEEEEECSSCSCEEE------EEEETTTTEEEEEETT---------------
T ss_pred CCCEEEEEccCCC--CeEEEEcCCCC--CeEEEEECCCCCceE------EEEeccCCEEEEEECC---------------
Confidence 9888888865432 38999998873 333333222211112 7889998888877521
Q ss_pred CCCCCCCeEEEEECCCCceEEEec
Q 002209 546 TPEGNIPFLDLFDINTGSKERIWE 569 (953)
Q Consensus 546 ~~~~~~~~L~~~d~~~~~~~~l~~ 569 (953)
...|+++|+++...+.+..
T Consensus 185 -----~~~I~~~d~dg~~~~~~~~ 203 (316)
T 1ijq_A 185 -----LHSISSIDVNGGNRKTILE 203 (316)
T ss_dssp -----TTEEEEEETTSCSCEEEEE
T ss_pred -----CCeEEEEecCCCceEEEee
Confidence 2359999998766655543
No 452
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.31 E-value=0.00017 Score=75.59 Aligned_cols=182 Identities=13% Similarity=0.023 Sum_probs=106.0
Q ss_pred CCCcceEEEEECCCCceeecccCCC-ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccch
Q 002209 215 SSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVR 293 (953)
Q Consensus 215 ~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (953)
+.+...|+++|.++|+...-...+. .. ...+.++|||++|+ +
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~----~~~~~~~pdG~ilv-s-------------------------------- 53 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKGWE----CNSVAATKAGEILF-S-------------------------------- 53 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTTCC----CCEEEECTTSCEEE-E--------------------------------
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCccCC----CcCeEECCCCCEEE-e--------------------------------
Confidence 3357889999997777543322222 11 45778999999777 4
Q ss_pred hhhhhcCCcchhhhhhhhccceEEEEEcCCc-eeEeCCC--CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEE
Q 002209 294 TFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGPP--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (953)
Q Consensus 294 ~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~-~~~l~~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~ 370 (953)
....++.+|.+|+ ...+..+ ..+.+..++|||+.|+..... ...++.
T Consensus 54 ------------------~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~------------~~~v~~ 103 (276)
T 3no2_A 54 ------------------YSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGH------------PSTILE 103 (276)
T ss_dssp ------------------CBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST------------TEEEEE
T ss_pred ------------------CCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCC------------CCEEEE
Confidence 1123445555443 2233222 345567899999988876531 126777
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE
Q 002209 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (953)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~ 450 (953)
++.+|+....+....... .....++.++..+||+.++.. ...+.|+.+|. +| +...
T Consensus 104 vd~~Gk~l~~~~~~~~~~-------~~~~~~~~v~~~~~G~~lv~~-------------~~~~~v~~~d~---~G-~~~w 159 (276)
T 3no2_A 104 VNMKGEVLSKTEFETGIE-------RPHAQFRQINKNKKGNYLVPL-------------FATSEVREIAP---NG-QLLN 159 (276)
T ss_dssp ECTTSCEEEEEEECCSCS-------SGGGSCSCCEECTTSCEEEEE-------------TTTTEEEEECT---TS-CEEE
T ss_pred EeCCCCEEEEEeccCCCC-------cccccccCceECCCCCEEEEe-------------cCCCEEEEECC---CC-CEEE
Confidence 788777666554321100 000123456788999855433 33567888885 54 4332
Q ss_pred EeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 451 LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 451 l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
-.............++|+.|+..... .+|+.+|++++
T Consensus 160 ~~~~~~~~~~~~~~~~g~~~v~~~~~----~~v~~~d~~tG 196 (276)
T 3no2_A 160 SVKLSGTPFSSAFLDNGDCLVACGDA----HCFVQLNLESN 196 (276)
T ss_dssp EEECSSCCCEEEECTTSCEEEECBTT----SEEEEECTTTC
T ss_pred EEECCCCccceeEcCCCCEEEEeCCC----CeEEEEeCcCC
Confidence 22222334456778899877654322 27999999865
No 453
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.30 E-value=3.5e-05 Score=87.31 Aligned_cols=209 Identities=12% Similarity=0.041 Sum_probs=112.8
Q ss_pred cccceEecc-----CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEE-e-cCCeEEEEEe
Q 002209 190 KLNFVTWSQ-----DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW-V-NNSTLLVCTI 262 (953)
Q Consensus 190 ~~~~~~wSP-----DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w-s-pDg~~l~~~~ 262 (953)
...+|..|. ||++|+... ..+..|.++|+++.+..+++..+.... ...+++ + ||++++++..
T Consensus 86 d~hh~~~s~t~g~~DG~~lfVnd--------~~~~rVavIdl~t~~~~~ii~ip~g~~---phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 86 DLHHVHMSFTEGKYDGRFLFMND--------KANTRVARVRCDVMKCDAILEIPNAKG---IHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp CBCCEEEEEETTEEEEEEEEEEE--------TTTTEEEEEETTTTEEEEEEECSSCCS---EEEEEECCSSBCSEEEEEE
T ss_pred CCCccccCCCCCCcCCCEEEEEc--------CCCCEEEEEECCCceEeeEEeCCCCCC---CcceeeeecCCCcEEEEec
Confidence 345588887 998776632 236789999999998777555443211 446666 5 9999998772
Q ss_pred cCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCCCcccccccC
Q 002209 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPS 340 (953)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~~~~~~~~~S 340 (953)
...... .++++.+. + .++ ..+.+..+|. +.++ .++.-++....++.|
T Consensus 155 ~~~~p~--------------~~dg~~l~------~--~~~---------~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~s 203 (595)
T 1fwx_A 155 EDETPL--------------VNDGTNME------D--VAN---------YVNVFTAVDADKWEVAWQVLVSGNLDNCDAD 203 (595)
T ss_dssp CSCEES--------------SCSSSSTT------C--GGG---------EEEEEEEEETTTTEEEEEEEESSCCCCEEEC
T ss_pred cccccc--------------CCCCcccc------c--ccc---------cCceEEEEECCCCeEEEEEEeCCCccceEEC
Confidence 110000 01111000 0 011 2355777888 6543 333322456778899
Q ss_pred CCCcEEEEEEecCCccccc--cCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEE
Q 002209 341 PDEKYILISSIHRPYSFIV--PCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (953)
Q Consensus 341 pDG~~l~~~~~~~~~~~~~--~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~ 418 (953)
|||+++++++...+..... ........+.+.+.. +...+.+||+... .
T Consensus 204 pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~---------------------------~~~~~v~~Gk~~~-i-- 253 (595)
T 1fwx_A 204 YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA---------------------------EIEKAIAAGDYQE-L-- 253 (595)
T ss_dssp SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH---------------------------HHHHHHHHTCSEE-E--
T ss_pred CCCCEEEEEecCcccCcchhhccccccceEEEeecc---------------------------ceeEeccCCCeeE-E--
Confidence 9999998888443210000 000000112222111 1223566776422 1
Q ss_pred eccCCCcccccccCCeEEEEecCCCC--CCC-ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 419 TQDGGDAKVEVTPRDIIYTQQAEPVQ--GEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~d~~~~~--g~~-~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
+.+-++|. .+ +.. ...+.- .....++.+||||++++.+.... ..+.++|.++
T Consensus 254 --------------~~V~VID~--~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s---~~VsVid~~~ 308 (595)
T 1fwx_A 254 --------------NGVKVVDG--RKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLS---PTVTVLDVTR 308 (595)
T ss_dssp --------------TTEEEEEC--SGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTS---SBEEEEEGGG
T ss_pred --------------CcEEEEeC--cccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCC---CeEEEEECcc
Confidence 24778885 22 222 223332 23456789999999988765433 2677888764
No 454
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.29 E-value=0.00023 Score=76.21 Aligned_cols=219 Identities=7% Similarity=0.004 Sum_probs=130.6
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCC----CceeecccCCC
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT----GKARPLFQSPD 239 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~----g~~~~lt~~~~ 239 (953)
.|+..++.. .....+ .+.......+.|+++++.|+++.. ....|+++++++ +....+.....
T Consensus 11 ~I~~i~~~~----~~~~~~--~~~~~~p~g~~~d~~~~~ly~~D~--------~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 11 EVRKMTLDR----SEYTSL--IPNLRNVVALDTEVASNRIYWSDL--------SQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp SEEEEETTS----CCCEEE--ECSCSSEEEEEEETTTTEEEEEET--------TTTEEEEEEC--------CEEEECSSC
T ss_pred eEEEEECCC----cceEeh--hcCCCceEEEEEEeCCCEEEEEEC--------CCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 677777732 222222 222235678999999988888642 356899999887 33333322111
Q ss_pred ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEE
Q 002209 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (953)
Q Consensus 240 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 319 (953)
.. ...+++.+.++.|+++.. ....|.++
T Consensus 77 ~~----p~glavd~~~~~ly~~d~------------------------------------------------~~~~I~~~ 104 (316)
T 1ijq_A 77 QA----PDGLAVDWIHSNIYWTDS------------------------------------------------VLGTVSVA 104 (316)
T ss_dssp SC----CCEEEEETTTTEEEEEET------------------------------------------------TTTEEEEE
T ss_pred CC----cCEEEEeecCCeEEEEEC------------------------------------------------CCCEEEEE
Confidence 11 346777777777776610 23467788
Q ss_pred EcCC-ceeEeCC-C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccc
Q 002209 320 SLDG-TVKEIGP-P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNS 396 (953)
Q Consensus 320 ~~~g-~~~~l~~-~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~ 396 (953)
+++| ..+.+.. . .....+++.|++.+|+++.... ...|++++++|...+.+.....
T Consensus 105 ~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-----------~~~I~~~~~dG~~~~~~~~~~~---------- 163 (316)
T 1ijq_A 105 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI---------- 163 (316)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCCEEEEECSSC----------
T ss_pred eCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC-----------CCeEEEEcCCCCCeEEEEECCC----------
Confidence 8855 3333332 3 5667889999888888775221 1379999999877665543211
Q ss_pred cccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecc---cccCCeeeccCCceEEEE
Q 002209 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---LRYGGISWCDDSLALVYE 473 (953)
Q Consensus 397 ~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~---~~~~~~~~SpDg~~l~~~ 473 (953)
..+..++|+|+++.|++. + ...+.|+++++ +|...+.+.... ....++++ |+..|+++
T Consensus 164 --~~P~gla~d~~~~~lY~~-D-----------~~~~~I~~~d~---dg~~~~~~~~~~~~~~~P~giav--~~~~ly~~ 224 (316)
T 1ijq_A 164 --QWPNGITLDLLSGRLYWV-D-----------SKLHSISSIDV---NGGNRKTILEDEKRLAHPFSLAV--FEDKVFWT 224 (316)
T ss_dssp --SCEEEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSCSCEEEEECTTTTSSEEEEEE--ETTEEEEE
T ss_pred --CCceEEEEeccCCEEEEE-E-----------CCCCeEEEEec---CCCceEEEeecCCccCCcEEEEE--ECCEEEEE
Confidence 234579999998766554 2 22458999996 666655554321 22334555 45677776
Q ss_pred EecccCceEEEEEcCCCC
Q 002209 474 SWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 474 ~~~~~~~~~l~~~d~~~~ 491 (953)
.+.. .+|++++..++
T Consensus 225 d~~~---~~V~~~~~~~g 239 (316)
T 1ijq_A 225 DIIN---EAIFSANRLTG 239 (316)
T ss_dssp ETTT---TEEEEEETTTC
T ss_pred ECCC---CeEEEEeCCCC
Confidence 5433 37888887654
No 455
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.29 E-value=0.00017 Score=78.43 Aligned_cols=180 Identities=11% Similarity=0.088 Sum_probs=117.5
Q ss_pred cceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhh
Q 002209 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (953)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (953)
...|+.+++++.+...+...... ...++|.+.+..|+++.
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~-----~~~l~~d~~~~~ly~~D----------------------------------- 91 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSD----------------------------------- 91 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSC-----EEEEEEETTTTEEEEEE-----------------------------------
T ss_pred ccceEEEeCCCCeeEEeecCCCc-----eEEEEEeccccEEEEEe-----------------------------------
Confidence 34689999988776655433221 45789998888888761
Q ss_pred hcCCcchhhhhhhhccceEEEEEc-CCceeEe-CCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc
Q 002209 298 LLKDEYDEDLFDYYATTQLVLVSL-DGTVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (953)
Q Consensus 298 ~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l-~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 374 (953)
.....|+++++ ++..+.+ ... .....+++.+.++.|+++... ...|++.+++
T Consensus 92 -------------~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~d 146 (349)
T 3v64_C 92 -------------VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLD 146 (349)
T ss_dssp -------------TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETT
T ss_pred -------------ccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC------------CCeEEEEcCC
Confidence 02357889998 4444443 333 455678888888888877622 2378999998
Q ss_pred CceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee-
Q 002209 375 GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK- 453 (953)
Q Consensus 375 g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~- 453 (953)
|+..+.+..... ..++.+++.|++.. +||++.. ....|++++. +|...+.+..
T Consensus 147 G~~~~~l~~~~l------------~~P~~iavdp~~g~-ly~td~~----------~~~~I~r~~~---dG~~~~~~~~~ 200 (349)
T 3v64_C 147 GAHRKVLLWQSL------------EKPRAIALHPMEGT-IYWTDWG----------NTPRIEASSM---DGSGRRIIADT 200 (349)
T ss_dssp SCSCEEEECTTC------------SCEEEEEEETTTTE-EEEEECS----------SSCEEEEEET---TSCSCEESCCS
T ss_pred CCceEEEEeCCC------------CCcceEEEecCcCe-EEEeccC----------CCCEEEEEeC---CCCCcEEEEEC
Confidence 876555443211 23457889997764 4553321 1357999985 6655555533
Q ss_pred cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 454 LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 454 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
......+++|+|+++.|+++.... .+|+.++.++.
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~---~~I~~~~~dG~ 235 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGS 235 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred CCCCcceEEEeCCCCEEEEEECCC---CEEEEEeCCCC
Confidence 233356799999999999885433 38999998874
No 456
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.25 E-value=2e-06 Score=96.03 Aligned_cols=108 Identities=13% Similarity=-0.117 Sum_probs=73.0
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHH-HHcCcEEEEcCCCCCCCCCChhhhh--hhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW-LARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~G~~V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~~ 746 (953)
.|+||++||.... ....|.......| +..+|.|+++|. .|+|.+.... ........++.+.
T Consensus 69 ~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~vD~---~g~g~s~y~~~~~~~~~v~~~la~l 132 (449)
T 1hpl_A 69 RKTRFIIHGFIDK-------------GEESWLSTMCQNMFKVESVNCICVDW---KSGSRTAYSQASQNVRIVGAEVAYL 132 (449)
T ss_dssp SEEEEEECCCCCT-------------TCTTHHHHHHHHHHHHCCEEEEEEEC---HHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCC-------------CCccHHHHHHHHHHhcCCeEEEEEeC---CcccCCccHHHHHHHHHHHHHHHHH
Confidence 6899999995311 0111111123344 457899999554 5666553211 1233455677788
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+++|.+...++.+++.|+||||||.+|+.++.++|++++.++...|+
T Consensus 133 l~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 133 VGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 88886443345689999999999999999999999999999988765
No 457
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.25 E-value=0.0035 Score=73.42 Aligned_cols=228 Identities=12% Similarity=0.018 Sum_probs=130.6
Q ss_pred ccceEEEEEc-CCcee--EeC-CC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCC
Q 002209 312 ATTQLVLVSL-DGTVK--EIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPL 386 (953)
Q Consensus 312 ~~~~l~~~~~-~g~~~--~l~-~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~ 386 (953)
....|..+++ .+... .+. .+ .....++|.+.+..|+++... ...|+.++++|+....+.....
T Consensus 324 ~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~------------~~~I~r~~~~g~~~~~v~~~~~ 391 (619)
T 3s94_A 324 RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDE------------VRAIRRSFIDGSGSQFVVTAQI 391 (619)
T ss_dssp ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC
T ss_pred cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCC------------CCeEEEEEcCCCccEEEEECCC
Confidence 3456777777 33221 121 11 445667888877778777522 2378888888765544433211
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec-ccccCCeeecc
Q 002209 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCD 465 (953)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~-~~~~~~~~~Sp 465 (953)
..+..+++.+.++.| ||++ ...+.|.+.++ +|...+.+... ......+++.|
T Consensus 392 ------------~~p~GlAvD~~~~~l-Y~tD-----------~~~~~I~v~~~---~G~~~~~l~~~~l~~P~~iavdp 444 (619)
T 3s94_A 392 ------------AHPDGIAVDWVARNL-YWTD-----------TGTDRIEVTRL---NGTMRKILISEDLEEPRAIVLDP 444 (619)
T ss_dssp ------------SCCCEEEEETTTTEE-EEEE-----------TTTTEEEEEET---TSCSCEEEECTTCCSEEEEEEET
T ss_pred ------------CCcCceEEecccCcE-EEEe-----------CCCCcEEEEeC---CCCeEEEEEECCCCCeeeEEEEc
Confidence 223467777666654 5532 23567888885 66655555432 23456688999
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCC
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (953)
....|+++.+... .+|+.+++++. ....+.........+ ++++++++.|++...
T Consensus 445 ~~G~ly~tD~g~~--~~I~r~~~dG~--~~~~l~~~~l~~P~G------lalD~~~~~LY~aD~---------------- 498 (619)
T 3s94_A 445 MVGYMYWTDWGEI--PKIERAALDGS--DRVVLVNTSLGWPNG------LALDYDEGKIYWGDA---------------- 498 (619)
T ss_dssp TTTEEEEEECSSS--CEEEEEETTSC--SCEEEECSSCSCEEE------EEEETTTTEEEEEET----------------
T ss_pred CCCcEEEecCCCC--CEEEEEccCCC--ccEEEEeCCCCCCee------eEEcccCCEEEEEEC----------------
Confidence 8788888876542 48999999874 334444332222122 677777777777642
Q ss_pred CCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEE
Q 002209 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (953)
Q Consensus 546 ~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~~L 624 (953)
....|..+++++...+.+...... ....+..++..++++-+ ....|++++..+|+.+.+
T Consensus 499 ----~~~~I~~~~~dG~~~~~~~~~~l~-------------~P~glav~~~~ly~tD~---~~~~I~~~~k~~g~~~~~ 557 (619)
T 3s94_A 499 ----KTDKIEVMNTDGTGRRVLVEDKIP-------------HIFGFTLLGDYVYWTDW---QRRSIERVHKRSAEREVI 557 (619)
T ss_dssp ----TTTEEEEEESSSCCCEEEEECCCC-------------SSCCEEEETTEEEEECT---TSSCEEEEESSSCCEEEE
T ss_pred ----CCCEEEEEecCCCceEEEeccCCC-------------CcEEEEEECCEEEEeec---CCCeEEEEEcCCCceEEE
Confidence 123588888877666555432211 11223334555554332 234677888777754443
No 458
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.25 E-value=0.00021 Score=75.43 Aligned_cols=191 Identities=14% Similarity=0.113 Sum_probs=106.3
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccC-CCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQS-PDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
.+....++|||+ |++... +...|++++.+ ++...+... ... ....+.+.+||+..+.. .
T Consensus 58 ~~~~i~~~~~g~-l~v~~~--------~~~~i~~~~~~-g~~~~~~~~~~~~----~~~~i~~~~~g~l~v~~-~----- 117 (299)
T 2z2n_A 58 KVMCLTISSDGE-VWFTEN--------AANKIGRITKK-GIIKEYTLPNPDS----APYGITEGPNGDIWFTE-M----- 117 (299)
T ss_dssp CEEEEEECTTSC-EEEEET--------TTTEEEEECTT-SCEEEEECSSTTC----CEEEEEECTTSCEEEEE-T-----
T ss_pred ceeeEEECCCCC-EEEeCC--------CCCeEEEECCC-CcEEEEeCCCcCC----CceeeEECCCCCEEEEe-c-----
Confidence 567788899987 444321 24579999987 444433211 111 14567788888654432 0
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCC--C-CcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~--~-~~~~~~~~SpDG~~ 345 (953)
....|++++.+|+...+.. . .....++++|||+
T Consensus 118 -------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~- 153 (299)
T 2z2n_A 118 -------------------------------------------NGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNA- 153 (299)
T ss_dssp -------------------------------------------TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSC-
T ss_pred -------------------------------------------CCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCC-
Confidence 1245777777655444322 2 4567788999996
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
|.++... ...|++++. ++....+.... . ...+..+++++||+ +|+..
T Consensus 154 l~v~~~~------------~~~i~~~~~-~g~~~~~~~~~-~----------~~~~~~i~~~~~g~--l~v~~------- 200 (299)
T 2z2n_A 154 LWFTENQ------------NNAIGRITE-SGDITEFKIPT-P----------ASGPVGITKGNDDA--LWFVE------- 200 (299)
T ss_dssp EEEEETT------------TTEEEEECT-TCCEEEEECSS-T----------TCCEEEEEECTTSS--EEEEE-------
T ss_pred EEEEeCC------------CCEEEEEcC-CCcEEEeeCCC-C----------CCcceeEEECCCCC--EEEEc-------
Confidence 4444311 237888888 44444331110 0 12345688999986 34321
Q ss_pred ccccccCCeEEEEecCCCCCCCceEEee--cccccCCeeeccCCceEEEEEecccCceEEEEEcCC
Q 002209 426 KVEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPG 489 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~~~~~g~~~~~l~~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~ 489 (953)
...+.|++++. + ++...+.. .......+.++++|+ |+++.... ..|+.++.+
T Consensus 201 ----~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~---~~i~~~d~~ 254 (299)
T 2z2n_A 201 ----IIGNKIGRITT---S-GEITEFKIPTPNARPHAITAGAGID-LWFTEWGA---NKIGRLTSN 254 (299)
T ss_dssp ----TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTT---TEEEEEETT
T ss_pred ----cCCceEEEECC---C-CcEEEEECCCCCCCceeEEECCCCC-EEEeccCC---ceEEEECCC
Confidence 12457888873 3 33333321 123445688999987 55543222 268888874
No 459
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.22 E-value=0.00017 Score=75.48 Aligned_cols=79 Identities=15% Similarity=0.001 Sum_probs=47.5
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~ 243 (953)
.|+++|.++ | ....++.. ........+.++|||+.|+ .. ...|+.+|.++....++.......
T Consensus 16 ~v~~~d~~t-G--~~~w~~~~-~~~~~~~~~~~~pdG~ilv-s~----------~~~V~~~d~~G~~~W~~~~~~~~~-- 78 (276)
T 3no2_A 16 KIAIINKDT-K--EIVWEYPL-EKGWECNSVAATKAGEILF-SY----------SKGAKMITRDGRELWNIAAPAGCE-- 78 (276)
T ss_dssp EEEEEETTT-T--EEEEEEEC-CTTCCCCEEEECTTSCEEE-EC----------BSEEEEECTTSCEEEEEECCTTCE--
T ss_pred EEEEEECCC-C--eEEEEeCC-CccCCCcCeEECCCCCEEE-eC----------CCCEEEECCCCCEEEEEcCCCCcc--
Confidence 678888633 3 22233321 1112467788999998666 21 346899998554455554321111
Q ss_pred ccccceEEecCCeEEEEE
Q 002209 244 AIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 244 ~~~~~~~wspDg~~l~~~ 261 (953)
+..+.+++||+.|+..
T Consensus 79 --~~~~~~~~dG~~lv~~ 94 (276)
T 3no2_A 79 --MQTARILPDGNALVAW 94 (276)
T ss_dssp --EEEEEECTTSCEEEEE
T ss_pred --ccccEECCCCCEEEEe
Confidence 5577899999988865
No 460
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.20 E-value=2.5e-06 Score=91.64 Aligned_cols=88 Identities=17% Similarity=0.146 Sum_probs=63.7
Q ss_pred hHHHHHHHcCcE---EEEcCCCCCCCCCChhhhh--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHH
Q 002209 703 TSVLLWLARGFA---ILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLL 777 (953)
Q Consensus 703 ~~~~~la~~G~~---V~~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a 777 (953)
.....|+++||. |+.+++ .|+|.+.... ......++++.+.++.+.+.. ..+++.|+||||||.++..++
T Consensus 72 ~l~~~L~~~Gy~~~~V~~~D~---~g~G~S~~~~~~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a 146 (342)
T 2x5x_A 72 SVYAELKARGYNDCEIFGVTY---LSSSEQGSAQYNYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATL 146 (342)
T ss_dssp CHHHHHHHTTCCTTSEEEECC---SCHHHHTCGGGCCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEEeC---CCCCccCCccccCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHH
Confidence 346678889998 998554 5555542221 112445667777777776542 236899999999999999999
Q ss_pred HhC--CCcccEEEEcccCCC
Q 002209 778 AHA--PHLFCCGIARSGAYN 795 (953)
Q Consensus 778 ~~~--p~~~~a~v~~~~~~d 795 (953)
.++ |++++++|++++...
T Consensus 147 ~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 147 QYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHTCGGGEEEEEEESCCTT
T ss_pred HHcCchhhhcEEEEECCCcc
Confidence 988 889999999987643
No 461
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.20 E-value=0.00038 Score=77.14 Aligned_cols=225 Identities=11% Similarity=0.070 Sum_probs=132.9
Q ss_pred cceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCc----eEEEeccCCC
Q 002209 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI----FVRELCDLPL 386 (953)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~----~~~~l~~~~~ 386 (953)
...|.++++ .+....+... .....++|+++++.|+++... ...|+.+++++. ....+.....
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~------------~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEEC------CCCEEEECSSC
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecC------------CCeEEEEEcccCCCCCcceEEEeCCC
Confidence 357888998 4445555444 677789999988888887622 237888888763 2222222110
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee-cccccCCeeecc
Q 002209 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCD 465 (953)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~-~~~~~~~~~~Sp 465 (953)
..+..+++.+.+..| ||++. ..+.|.++++ +|...+.+.. .......+++.|
T Consensus 159 ------------~~p~glavD~~~~~l-Y~~d~-----------~~~~I~~~~~---~g~~~~~l~~~~~~~P~~iavdp 211 (400)
T 3p5b_L 159 ------------QAPDGLAVDWIHSNI-YWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 211 (400)
T ss_dssp ------------SCEEEEEEETTTTEE-EEEET-----------TTTEEEEECT---TTCSEEEEEECSSCCEEEEEEET
T ss_pred ------------CCcccEEEEecCCce-EEEEC-----------CCCeEEEEeC---CCCceEEEEeCCCCCcceEEEec
Confidence 223457777655544 55332 2457888885 6665555544 233456789999
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCC
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (953)
.+..|+++.+... .+|+++++++. ..+.+.........+ ++++++++.|++...
T Consensus 212 ~~g~ly~td~~~~--~~I~~~~~dG~--~~~~~~~~~l~~P~g------lavd~~~~~lY~aD~---------------- 265 (400)
T 3p5b_L 212 VHGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS---------------- 265 (400)
T ss_dssp TTTEEEEEECSSS--CCEEEEETTSC--SCEEEECSSCSCEEE------EEEETTTTEEEEEET----------------
T ss_pred ccCeEEEEeCCCC--CEEEEEeCCCC--ccEEEEECCCCceEE------EEEEeCCCEEEEEEC----------------
Confidence 9889998876432 37999999874 334443322222122 788988888887742
Q ss_pred CCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002209 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (953)
Q Consensus 546 ~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~ 620 (953)
....|+++|++++..+.+....... .....++.++..++++-+. ...|++++..+|+
T Consensus 266 ----~~~~I~~~d~dG~~~~~~~~~~~~l-----------~~P~gl~v~~~~lywtd~~---~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 266 ----KLHSISSIDVNGGNRKTILEDEKRL-----------AHPFSLAVFEDKVFWTDII---NEAIFSANRLTGS 322 (400)
T ss_dssp ----TTTEEEEEETTSCCCEEEEECSSTT-----------SSEEEEEEETTEEEEEESS---SCSEEEEESSSCC
T ss_pred ----CCCEEEEEeCCCCccEEEEeCCCCC-----------CCCEEEEEeCCEEEEecCC---CCeEEEEEcCCCC
Confidence 1235999999877766665432210 0111233455666665532 2347777755554
No 462
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.18 E-value=0.00048 Score=76.37 Aligned_cols=180 Identities=14% Similarity=0.000 Sum_probs=116.5
Q ss_pred cceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhh
Q 002209 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (953)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (953)
...|++++++++....+...... ...++|.+.+..||++..
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~-----~~~l~~d~~~~~lywsD~---------------------------------- 131 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 131 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSC-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred cceeEEEccCCcceeEeccccCc-----ceEEeeeeccCceEEEec----------------------------------
Confidence 46899999998776655433221 457899988888887610
Q ss_pred hcCCcchhhhhhhhccceEEEEEcCC-----ceeEe-CCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEE
Q 002209 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (953)
Q Consensus 298 ~~~~~~d~~~~~~~~~~~l~~~~~~g-----~~~~l-~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~ 370 (953)
....|++++++| ....+ ... .....+++.+.++.|+++... ...|++
T Consensus 132 --------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~------------~~~I~~ 185 (400)
T 3p5b_L 132 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 185 (400)
T ss_dssp --------------TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC------------CCeEEE
Confidence 224677888743 22333 323 556677888877788777522 247889
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE
Q 002209 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (953)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~ 450 (953)
.+++|+..+.+..... ..++.++..|.+.. +||++. .....|+++++ +|...+.
T Consensus 186 ~~~~g~~~~~l~~~~~------------~~P~~iavdp~~g~-ly~td~----------~~~~~I~~~~~---dG~~~~~ 239 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDW----------GTPAKIKKGGL---NGVDIYS 239 (400)
T ss_dssp ECTTTCSEEEEEECSS------------CCEEEEEEETTTTE-EEEEEC----------SSSCCEEEEET---TSCSCEE
T ss_pred EeCCCCceEEEEeCCC------------CCcceEEEecccCe-EEEEeC----------CCCCEEEEEeC---CCCccEE
Confidence 9999877665544221 23467889887654 455332 12357889885 6666655
Q ss_pred Eeecc-cccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 451 LHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 451 l~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
+.... ....++++++++++|+++.... .+|+.++.++.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~---~~I~~~d~dG~ 278 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 278 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCC---CEEEEEeCCCC
Confidence 54332 4456799999999999885432 38999999874
No 463
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.18 E-value=3.4e-06 Score=94.24 Aligned_cols=107 Identities=11% Similarity=-0.075 Sum_probs=71.2
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHH-cCcEEEEcCCCCCCCCCChhhh--hhhHHHHHHHHHHH
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~V~~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~~ 746 (953)
.|+||++||.... ....|.......|++ .+|.|+++|. .|+|.+... .........|+.+.
T Consensus 70 ~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~vD~---~g~g~s~y~~~~~~~~~~a~~l~~l 133 (450)
T 1rp1_A 70 KKTRFIIHGFIDK-------------GEENWLLDMCKNMFKVEEVNCICVDW---KKGSQTSYTQAANNVRVVGAQVAQM 133 (450)
T ss_dssp SEEEEEECCCCCT-------------TCTTHHHHHHHHHTTTCCEEEEEEEC---HHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCCCC-------------CCcchHHHHHHHHHhcCCeEEEEEeC---ccccCCcchHHHHHHHHHHHHHHHH
Confidence 6899999995311 110111112334454 4899999555 455443211 11234456778888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccC
Q 002209 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (953)
Q Consensus 747 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (953)
+++|.+...++.+++.|+||||||.+|+.++.++|+ ++.++...|+
T Consensus 134 l~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred HHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 888864433456799999999999999999999998 9999887765
No 464
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.16 E-value=2.5e-06 Score=94.68 Aligned_cols=166 Identities=14% Similarity=0.144 Sum_probs=102.5
Q ss_pred ccEEEEeCCCCCcCcCCCCcccCCCCCCCCccchHHHHHHHcCc---EEEEcCCCCCCCCCChh---------------h
Q 002209 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF---AILGGPTTPIIGEGDEE---------------A 731 (953)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~---~V~~~~~~~~~G~G~~~---------------~ 731 (953)
.|.||++||..... ..| ......|+++|| .|+.+++ .|+|.+. +
T Consensus 22 ~ppVVLlHG~g~s~-----------~~w----~~la~~La~~Gy~~~~Via~Dl---pG~G~S~~~~~Dv~~~G~~~~~G 83 (484)
T 2zyr_A 22 FRPVVFVHGLAGSA-----------GQF----ESQGMRFAANGYPAEYVKTFEY---DTISWALVVETDMLFSGLGSEFG 83 (484)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHTTCCGGGEEEECC---CHHHHHHHTTTSTTTTTGGGHHH
T ss_pred CCEEEEECCCCCCH-----------HHH----HHHHHHHHHcCCCcceEEEEEC---CCCCccccccccccccccccccc
Confidence 56789999953111 111 245667888999 6888444 5666430 0
Q ss_pred -------------------hhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CcccEEEE
Q 002209 732 -------------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIA 789 (953)
Q Consensus 732 -------------------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~ 789 (953)
........+.++.+.++.+.+.. ..+++.|+||||||.+++.++.++| ++++++|+
T Consensus 84 ~n~~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVl 161 (484)
T 2zyr_A 84 LNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLIL 161 (484)
T ss_dssp HHHGGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEE
T ss_pred cccccccccccccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEE
Confidence 00123345667777777776653 2368999999999999999999987 48999999
Q ss_pred cccCCCCCCCCcCcccccchhhhhHHHHHhcCcccccCCCCCcEEEEEeCCCCC--CCCchHHHHHHHHHHHhCCCcEEE
Q 002209 790 RSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNN--SGTLTMQSDRFFNALKGHGALCRL 867 (953)
Q Consensus 790 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Li~~G~~D~~--v~~~~~~~~~~~~~l~~~g~~~~~ 867 (953)
+++..+.. + | ...++|.+.|..|.. |.. +.. .++. ..+.
T Consensus 162 Iapp~~~d----------------------~-p------~g~~~L~ilG~~d~~p~V~~-pss------~L~~---ga~~ 202 (484)
T 2zyr_A 162 LDGVWGVD----------------------A-P------EGIPTLAVFGNPKALPALGL-PEE------KVVY---NATN 202 (484)
T ss_dssp ESCCCSEE----------------------C-C------TTSCEEEEEECGGGSCCSSC-CSS------CCEE---TSEE
T ss_pred ECCccccc----------------------c-C------cCCHHHHHhCCCCcCCcccC-hhH------hcCC---CceE
Confidence 99865410 0 0 235677777766531 110 111 1210 1256
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002209 868 VILPFESHGYAARESIMHVLWETDRWLQK 896 (953)
Q Consensus 868 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (953)
+++++++|... ..+ ..+++.+.+||..
T Consensus 203 v~i~~a~H~~l-l~d-p~v~~~Vl~fL~~ 229 (484)
T 2zyr_A 203 VYFNNMTHVQL-CTS-PETFAVMFEFING 229 (484)
T ss_dssp EEETTCCHHHH-HHC-HHHHHHHHHHHHS
T ss_pred EEECCCCcccc-ccC-HHHHHHHHHHhcc
Confidence 67799999753 222 3556678888874
No 465
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.15 E-value=0.0003 Score=75.24 Aligned_cols=224 Identities=8% Similarity=-0.009 Sum_probs=130.9
Q ss_pred cceEEEEEcCCc---eeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE-EEeccCCCc
Q 002209 313 TTQLVLVSLDGT---VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLA 387 (953)
Q Consensus 313 ~~~l~~~~~~g~---~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~-~~l~~~~~~ 387 (953)
...|.++++++. ...+... .....++|.+.++.|+++... .+.|+.++++++.. ..+....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~------------~~~I~r~~~~g~~~~~~~~~~~-- 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS------------EEAIKRTEFNKTESVQNVVVSG-- 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT------------TTEEEEEETTSSSCCCEEEEEC--
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC------------CCcEEEEEccCCCceEEEEcCC--
Confidence 357888998432 2222222 445678899988888777522 24788888886632 1111111
Q ss_pred ccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe-ecccccCCeeeccC
Q 002209 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDD 466 (953)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~-~~~~~~~~~~~SpD 466 (953)
...+..+++.+.+..| ||++. ..+.|.++++ +|...+.+. ........+++.|+
T Consensus 78 ----------l~~p~glavd~~~g~l-y~~d~-----------~~~~I~~~~~---dG~~~~~l~~~~~~~P~giavdp~ 132 (318)
T 3sov_A 78 ----------LLSPDGLACDWLGEKL-YWTDS-----------ETNRIEVSNL---DGSLRKVLFWQELDQPRAIALDPS 132 (318)
T ss_dssp ----------CSCCCEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEEEGG
T ss_pred ----------CCCccEEEEEcCCCeE-EEEEC-----------CCCEEEEEEC---CCCcEEEEEeCCCCCccEEEEeCC
Confidence 0123467787766554 45322 2457888885 665555554 33334567889998
Q ss_pred CceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCCC
Q 002209 467 SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (953)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (953)
+..|+++.+... .+|+++++++. ..+.+.........+ ++++++++.|++...
T Consensus 133 ~g~ly~td~~~~--~~I~r~~~dG~--~~~~~~~~~l~~Png------lavd~~~~~lY~aD~----------------- 185 (318)
T 3sov_A 133 SGFMYWTDWGEV--PKIERAGMDGS--SRFIIINSEIYWPNG------LTLDYEEQKLYWADA----------------- 185 (318)
T ss_dssp GTEEEEEECSSS--CEEEEEETTSC--SCEEEECSSCSCEEE------EEEETTTTEEEEEET-----------------
T ss_pred CCEEEEEecCCC--CEEEEEEcCCC--CeEEEEECCCCCccE------EEEeccCCEEEEEEC-----------------
Confidence 888888865432 48999999874 334443322211112 789999988888752
Q ss_pred CCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002209 547 PEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (953)
Q Consensus 547 ~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~ 621 (953)
....|+++|+++...+.+...... ....+..++..++++-. ....|+.++..+|+.
T Consensus 186 ---~~~~I~~~d~dG~~~~~~~~~~~~-------------~P~glav~~~~lywtd~---~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 186 ---KLNFIHKSNLDGTNRQAVVKGSLP-------------HPFALTLFEDILYWTDW---STHSILACNKYTGEG 241 (318)
T ss_dssp ---TTTEEEEEETTSCSCEEEECSCCS-------------CEEEEEEETTEEEEEET---TTTEEEEEETTTCCS
T ss_pred ---CCCEEEEEcCCCCceEEEecCCCC-------------CceEEEEeCCEEEEEec---CCCeEEEEECCCCCc
Confidence 123599999987666655532211 01122334556666533 234677788766643
No 466
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.12 E-value=0.0013 Score=69.11 Aligned_cols=191 Identities=16% Similarity=0.119 Sum_probs=106.8
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+..+.++|||+ |++... ....|++++.+ ++...+...... ..+..+++.+||+..+.. .
T Consensus 16 ~~~~i~~d~~g~-l~v~~~--------~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 75 (299)
T 2z2n_A 16 GPYGITVSDKGK-VWITQH--------KANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTE-N------ 75 (299)
T ss_dssp CEEEEEECTTSC-EEEEET--------TTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEE-T------
T ss_pred CccceEECCCCC-EEEEec--------CCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeC-C------
Confidence 567788899997 444321 24579999988 665544321110 115578888998755432 0
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCC--C-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~--~-~~~~~~~~SpDG~~l 346 (953)
....|++++.+|+.+.+.. . .....++++|||+.
T Consensus 76 ------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l- 112 (299)
T 2z2n_A 76 ------------------------------------------AANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDI- 112 (299)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCE-
T ss_pred ------------------------------------------CCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCE-
Confidence 1245777777555444332 2 45667889999964
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
.++... ...|++++.++. ...+.... . ...+..+++++||+ +++. .
T Consensus 113 ~v~~~~------------~~~i~~~d~~g~-~~~~~~~~-~----------~~~~~~i~~~~~g~-l~v~-~-------- 158 (299)
T 2z2n_A 113 WFTEMN------------GNRIGRITDDGK-IREYELPN-K----------GSYPSFITLGSDNA-LWFT-E-------- 158 (299)
T ss_dssp EEEETT------------TTEEEEECTTCC-EEEEECSS-T----------TCCEEEEEECTTSC-EEEE-E--------
T ss_pred EEEecC------------CceEEEECCCCC-EEEecCCC-C----------CCCCceEEEcCCCC-EEEE-e--------
Confidence 343311 237888888443 33322110 0 02345788999984 3332 1
Q ss_pred cccccCCeEEEEecCCCCCCCceEEe--ecccccCCeeeccCCceEEEEEecccCceEEEEEcC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~ 488 (953)
...+.+++++. + ++...+. ........+.++++|+ |+++.... ..|++++.
T Consensus 159 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~---~~i~~~~~ 211 (299)
T 2z2n_A 159 ---NQNNAIGRITE---S-GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIG---NKIGRITT 211 (299)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT---TEEEEECT
T ss_pred ---CCCCEEEEEcC---C-CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCC---ceEEEECC
Confidence 12357888873 3 3443331 1222345678899987 44443222 27899998
No 467
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.07 E-value=0.00051 Score=73.43 Aligned_cols=143 Identities=11% Similarity=0.042 Sum_probs=89.7
Q ss_pred ceEEEEEcCCc---eeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCccc
Q 002209 314 TQLVLVSLDGT---VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAED 389 (953)
Q Consensus 314 ~~l~~~~~~g~---~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~ 389 (953)
..|++++++|. ...+... .....+++.+.+..|+++... ...|++++++|+..+.+.....
T Consensus 57 ~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~dG~~~~~l~~~~~--- 121 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------------TNRIEVSNLDGSLRKVLFWQEL--- 121 (318)
T ss_dssp TEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC---
T ss_pred CcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC------------CCEEEEEECCCCcEEEEEeCCC---
Confidence 56888888332 2223222 455677888878888777522 2478899998876555543211
Q ss_pred CCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec-ccccCCeeeccCCc
Q 002209 390 IPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDSL 468 (953)
Q Consensus 390 ~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~-~~~~~~~~~SpDg~ 468 (953)
..++.++..|++.. +||++. .....|++++. +|...+.+... -....+++|+++++
T Consensus 122 ---------~~P~giavdp~~g~-ly~td~----------~~~~~I~r~~~---dG~~~~~~~~~~l~~Pnglavd~~~~ 178 (318)
T 3sov_A 122 ---------DQPRAIALDPSSGF-MYWTDW----------GEVPKIERAGM---DGSSRFIIINSEIYWPNGLTLDYEEQ 178 (318)
T ss_dssp ---------SSEEEEEEEGGGTE-EEEEEC----------SSSCEEEEEET---TSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred ---------CCccEEEEeCCCCE-EEEEec----------CCCCEEEEEEc---CCCCeEEEEECCCCCccEEEEeccCC
Confidence 23457888887654 455332 12457999985 66555555332 23446799999999
Q ss_pred eEEEEEecccCceEEEEEcCCCCCCCcEEee
Q 002209 469 ALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (953)
Q Consensus 469 ~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 499 (953)
.|+++.... .+|+.++.++. ..+.+.
T Consensus 179 ~lY~aD~~~---~~I~~~d~dG~--~~~~~~ 204 (318)
T 3sov_A 179 KLYWADAKL---NFIHKSNLDGT--NRQAVV 204 (318)
T ss_dssp EEEEEETTT---TEEEEEETTSC--SCEEEE
T ss_pred EEEEEECCC---CEEEEEcCCCC--ceEEEe
Confidence 999885432 38999999874 334443
No 468
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.03 E-value=1.2e-05 Score=73.65 Aligned_cols=64 Identities=17% Similarity=0.068 Sum_probs=45.4
Q ss_pred HcCcEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 002209 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (953)
Q Consensus 710 ~~G~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 782 (953)
+++|.|+.+ +..|+|.+...........+|+.+.++.+ +.+++.++||||||.+++.++.++|.
T Consensus 40 ~~~~~v~~~---d~~G~G~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 40 PEGYAFYLL---DLPGYGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CTTSEEEEE---CCTTSTTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hCCcEEEEE---CCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 345999994 44677776443322455556655555543 34589999999999999999999975
No 469
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.03 E-value=0.00011 Score=87.60 Aligned_cols=227 Identities=10% Similarity=0.027 Sum_probs=131.8
Q ss_pred cceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC----ceEEEeccCCC
Q 002209 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPL 386 (953)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g----~~~~~l~~~~~ 386 (953)
...|+++++ +++...+... .....++|++++..|+++... ...|+++++++ .....+....
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~------------~~~I~~~~~~g~~~~~~~~~~i~~~- 451 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD- 451 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTT------------TTSBEEEESCCCCC-CCCCCBCCSC-
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecC------------CCeEEEEecCCCCCCcceEEEEeCC-
Confidence 356888888 5555555444 667789999988888776522 24788888876 2211111100
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec-ccccCCeeecc
Q 002209 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCD 465 (953)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~-~~~~~~~~~Sp 465 (953)
...+..+++.+.+..|++. + ...+.|+++++ ++...+.+... ......+++.|
T Consensus 452 -----------~~~P~glavD~~~g~LY~t-D-----------~~~~~I~v~d~---dg~~~~~l~~~~~~~P~giavDp 505 (699)
T 1n7d_A 452 -----------IQAPDGLAVDWIHSNIYWT-D-----------SVLGTVSVADT---KGVKRKTLFREQGSKPRAIVVDP 505 (699)
T ss_dssp -----------C--CCCEECCCSSSBCEEC-C-----------TTTSCEEEEBS---SSCCEEEECCCSSCCCCCEECCS
T ss_pred -----------CCCcceEEEEeeCCcEEEE-e-----------ccCCeEEEEec---CCCceEEEEeCCCCCcceEEEcc
Confidence 0123467777666655443 1 22457888885 66555555332 34456789999
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCC
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (953)
++++|+++.+... .+|+++++++. ..+.+.........+ ++|+|++++|++...
T Consensus 506 ~~g~ly~td~~~~--~~I~~~~~dG~--~~~~l~~~~l~~PnG------lavd~~~~~LY~aD~---------------- 559 (699)
T 1n7d_A 506 VHGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS---------------- 559 (699)
T ss_dssp SSSCCEECCCSSS--CCEEBCCSSSC--CCCEESCSSCSSCCC------EEECTTTCCEEEEET----------------
T ss_pred CCCcEEEcccCCC--CeEEEEeCCCC--CeeEEEeCCCCCccE------EEEeccCCEEEEEec----------------
Confidence 9888888764332 37999988874 223332222111111 889999988888752
Q ss_pred CCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002209 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (953)
Q Consensus 546 ~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~~~ 622 (953)
....|+++|+++...+.+...... ......++.++..++++-+. ...|++++..+|+..
T Consensus 560 ----~~~~I~~~d~dG~~~~~~~~~~~~-----------~~~P~glavd~~~lywtd~~---~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 560 ----KLHSISSIDVNGGNRKTILEDEKR-----------LAHPFSLAVFEDKVFWTDII---NEAIFSANRLTGSDV 618 (699)
T ss_dssp ----TTTEEEEECSSSSCCEEECCCSSS-----------CSSCCCCEEETTEEEEECST---TTCEEEEETTTEEEE
T ss_pred ----CCCeEEEEccCCCceEEEEecCCc-----------CCCceEeEEECCEEEEEeCC---CCeEEEEEccCCCce
Confidence 123588999887655555432211 01122345566666655432 346888887666543
No 470
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.02 E-value=0.0013 Score=78.97 Aligned_cols=225 Identities=11% Similarity=0.060 Sum_probs=132.1
Q ss_pred cceEEEEEc-CCceeEeCCC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCc----eEEEeccCCC
Q 002209 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI----FVRELCDLPL 386 (953)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~----~~~~l~~~~~ 386 (953)
...|.++++ .+....+... .....++|++.+..|+++... ...|+.+++++. ....+....
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~------------~~~I~~~~l~g~~~~~~~~~vi~~~- 469 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD- 469 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSS-
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeecc------------ceeEEEEeccCCCCCcceeEEEecC-
Confidence 346778888 4455555444 666788899888888777522 237888888863 222222211
Q ss_pred cccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee-cccccCCeeecc
Q 002209 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCD 465 (953)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~-~~~~~~~~~~Sp 465 (953)
...+..+++.+.++.| ||++ ...+.|+++++ +|...+.+.. .......+++.|
T Consensus 470 -----------l~~P~GLAvD~~~~~L-Y~tD-----------~~~~~I~v~~l---dG~~~~~l~~~~l~~P~gIaVDp 523 (791)
T 3m0c_C 470 -----------IQAPDGLAVDWIHSNI-YWTD-----------SVLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 523 (791)
T ss_dssp -----------CSCCCEEEEETTTTEE-EEEE-----------TTTTEEEEEET---TSSSEEEEEECTTCCEEEEEEET
T ss_pred -----------CCCcceeeeeecCCcE-EEEe-----------cCCCeEEEEeC---CCCeEEEEEeCCCCCcceEEEec
Confidence 1234568888877655 5533 23458899986 6666555543 333456789999
Q ss_pred CCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcEEEEecCCC
Q 002209 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (953)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (953)
.+..|+++.+... .+|+++++++. ..+.+.........+ +++.+++..|++...
T Consensus 524 ~~g~LYwtD~g~~--~~I~~~~~dG~--~~~~lv~~~l~~P~G------LavD~~~~~LYwaD~---------------- 577 (791)
T 3m0c_C 524 VHGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS---------------- 577 (791)
T ss_dssp TTTEEEEEECSSS--CEEEEEETTSC--CEEEEECSSCSCEEE------EEEETTTTEEEEEET----------------
T ss_pred CCCCEEEecCCCC--CeEEEEecCCC--ceEEEEeCCCCCceE------EEEecCCCeEEEEeC----------------
Confidence 9889999876542 38999999874 334444322222122 677777777777642
Q ss_pred CCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002209 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (953)
Q Consensus 546 ~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~g~ 620 (953)
....|+++++++...+.+...... ......++.++++|+++-+. ...|++++..+|+
T Consensus 578 ----~~~~I~~~d~dG~~~~~v~~~~~~-----------l~~P~glav~~~~lYwtD~~---~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 578 ----KLHSISSIDVNGGNRKTILEDEKR-----------LAHPFSLAVFEDKVFWTDII---NEAIFSANRLTGS 634 (791)
T ss_dssp ----TTTEEEEEETTSCSCEEEEECTTT-----------TSSEEEEEEETTEEEEEETT---TTEEEEEETTTCC
T ss_pred ----CCCcEEEEecCCCceEEEecCCCc-----------cCCCCEEEEeCCEEEEEECC---CCEEEEEeCCCCc
Confidence 123589999988777766544321 00112234445555554432 3457777755553
No 471
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.97 E-value=0.0012 Score=79.34 Aligned_cols=180 Identities=14% Similarity=-0.006 Sum_probs=116.0
Q ss_pred cceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhh
Q 002209 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (953)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (953)
...|+.+++++++...+...... ...++|.+.+..||++..
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~-----~~gl~~d~~~~~lY~sD~---------------------------------- 443 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 443 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSS-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred ccceeEeeccCCcceeeecCCCc-----eEEEeecccCCeeEEeec----------------------------------
Confidence 45688888887766555443221 457888887777777610
Q ss_pred hcCCcchhhhhhhhccceEEEEEcCC-----ceeEeCC-C-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEE
Q 002209 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIGP-P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (953)
Q Consensus 298 ~~~~~~d~~~~~~~~~~~l~~~~~~g-----~~~~l~~-~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~ 370 (953)
....|++++++| ....+.. . .....+++.+.|+.|+++... ...|++
T Consensus 444 --------------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~------------~~~I~v 497 (791)
T 3m0c_C 444 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 497 (791)
T ss_dssp --------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC------------CCeEEE
Confidence 224677888743 2233332 3 566778888889888877522 348999
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE
Q 002209 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (953)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~ 450 (953)
.+++|+..+.|..... ..++.+++.|.+.. +||++. .....|+++++ +|...+.
T Consensus 498 ~~ldG~~~~~l~~~~l------------~~P~gIaVDp~~g~-LYwtD~----------g~~~~I~~~~~---dG~~~~~ 551 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDW----------GTPAKIKKGGL---NGVDIYS 551 (791)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEEC----------SSSCEEEEEET---TSCCEEE
T ss_pred EeCCCCeEEEEEeCCC------------CCcceEEEecCCCC-EEEecC----------CCCCeEEEEec---CCCceEE
Confidence 9999887766654221 23467889887654 556432 12357888886 7666655
Q ss_pred Eeecc-cccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 451 LHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 451 l~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
+.... ....++++.+++++|+++.... .+|+++++++.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~---~~I~~~d~dG~ 590 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 590 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCC---CcEEEEecCCC
Confidence 54433 3456789999999998885332 38999999884
No 472
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.96 E-value=0.0025 Score=67.07 Aligned_cols=193 Identities=13% Similarity=0.067 Sum_probs=107.2
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
.+....+++||+ |++.. .+...|++++.+ |+...+...... .....+++.++|+..+..
T Consensus 63 ~~~~i~~~~~g~-l~v~~--------~~~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-------- 121 (300)
T 2qc5_A 63 KVMCLIVSSLGD-IWFTE--------NGANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNGDIWFTQ-------- 121 (300)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTTCEEEEE--------
T ss_pred cceeEEECCCCC-EEEEe--------cCCCeEEEECCC-CCeEEecCCCCC---CCCccceECCCCCEEEEc--------
Confidence 466778889986 44432 124579999988 555443221111 114567788888754432
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEe--CCC-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEI--GPP-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l--~~~-~~~~~~~~SpDG~~l 346 (953)
.....|++++.+|+...+ ... .....+++++||+ |
T Consensus 122 -----------------------------------------~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l 159 (300)
T 2qc5_A 122 -----------------------------------------LNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA-L 159 (300)
T ss_dssp -----------------------------------------TTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-E
T ss_pred -----------------------------------------cCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-E
Confidence 022457777776654433 212 4567788999998 5
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
.++... ...|++++.++.. ..+.. +.. ...+..+.+++||+ + |+..
T Consensus 160 ~v~~~~------------~~~i~~~~~~g~~-~~~~~-~~~----------~~~~~~i~~d~~g~-l-~v~~-------- 205 (300)
T 2qc5_A 160 WFTENQ------------NNSIGRITNTGKL-EEYPL-PTN----------AAAPVGITSGNDGA-L-WFVE-------- 205 (300)
T ss_dssp EEEETT------------TTEEEEECTTCCE-EEEEC-SST----------TCCEEEEEECTTSS-E-EEEE--------
T ss_pred EEEecC------------CCeEEEECCCCcE-EEeeC-CCC----------CCCcceEEECCCCC-E-EEEc--------
Confidence 444311 2368888885433 33221 100 02345688889884 3 3321
Q ss_pred cccccCCeEEEEecCCCCCCCceEEee--cccccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
...+.|++++. + ++...+.. .......+.++++|+ |+++.... ..|+.++.++
T Consensus 206 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~---~~i~~~~~~g 260 (300)
T 2qc5_A 206 ---IMGNKIGRITT---T-GEISEYDIPTPNARPHAITAGKNSE-IWFTEWGA---NQIGRITNDN 260 (300)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTT---TEEEEECTTS
T ss_pred ---cCCCEEEEEcC---C-CcEEEEECCCCCCCceEEEECCCCC-EEEeccCC---CeEEEECCCC
Confidence 12346888873 3 33333321 223345688999987 55554222 2788898843
No 473
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.96 E-value=0.05 Score=63.60 Aligned_cols=124 Identities=6% Similarity=-0.115 Sum_probs=71.8
Q ss_pred cCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCCCccccCCCCCCCeEeccCCCEEEEEeeeccCCCcE
Q 002209 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTY 537 (953)
Q Consensus 458 ~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~SpDG~~l~~~~~~~~~~~~~ 537 (953)
...+.|.+.+..|+++.... .+|+++++++. ....+.........+ +++.+.++.|++...
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~---~~I~r~~~~g~--~~~~v~~~~~~~p~G------lAvD~~~~~lY~tD~-------- 411 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEV---RAIRRSFIDGS--GSQFVVTAQIAHPDG------IAVDWVARNLYWTDT-------- 411 (619)
T ss_dssp EEEEEEETTTTEEEEEETTT---TEEEEEETTSC--SCEEEECSSCSCCCE------EEEETTTTEEEEEET--------
T ss_pred cEEEEEEcCCCeEEEEeCCC---CeEEEEEcCCC--ccEEEEECCCCCcCc------eEEecccCcEEEEeC--------
Confidence 34578888888888875432 37999998874 333333222111111 556655666665531
Q ss_pred EEEecCCCCCCCCCCeEEEEECCCCceEEEeccCcccceeeeEeeccCCccccccccCCEEEEEEecCCCCceEEEEECC
Q 002209 538 ILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWP 617 (953)
Q Consensus 538 ~~~~~~~~~~~~~~~~L~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 617 (953)
+ ...|.+.+++++..+.|....- ..... .++.|....++++-+.. .+.|++.+++
T Consensus 412 ------~------~~~I~v~~~~G~~~~~l~~~~l----~~P~~-------iavdp~~G~ly~tD~g~--~~~I~r~~~d 466 (619)
T 3s94_A 412 ------G------TDRIEVTRLNGTMRKILISEDL----EEPRA-------IVLDPMVGYMYWTDWGE--IPKIERAALD 466 (619)
T ss_dssp ------T------TTEEEEEETTSCSCEEEECTTC----CSEEE-------EEEETTTTEEEEEECSS--SCEEEEEETT
T ss_pred ------C------CCcEEEEeCCCCeEEEEEECCC----CCeee-------EEEEcCCCcEEEecCCC--CCEEEEEccC
Confidence 1 2358888887766555543221 11111 35667667788776543 4678988887
Q ss_pred CCCeeEEe
Q 002209 618 DKKSCQIT 625 (953)
Q Consensus 618 ~g~~~~Lt 625 (953)
+...+.|.
T Consensus 467 G~~~~~l~ 474 (619)
T 3s94_A 467 GSDRVVLV 474 (619)
T ss_dssp SCSCEEEE
T ss_pred CCccEEEE
Confidence 66555554
No 474
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.94 E-value=0.0011 Score=70.45 Aligned_cols=238 Identities=13% Similarity=0.073 Sum_probs=121.6
Q ss_pred eecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEE
Q 002209 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 182 l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~ 261 (953)
+..++.+.....++|+|||+ |+++.. ....|++++.+++... ....+.. ...+++++||+ |+++
T Consensus 25 ~~~~p~~~~pegia~~~~g~-lyv~d~--------~~~~I~~~d~~g~~~~-~~~~~~~-----p~gia~~~dG~-l~va 88 (306)
T 2p4o_A 25 ITSFPVNTFLENLASAPDGT-IFVTNH--------EVGEIVSITPDGNQQI-HATVEGK-----VSGLAFTSNGD-LVAT 88 (306)
T ss_dssp EEEECTTCCEEEEEECTTSC-EEEEET--------TTTEEEEECTTCCEEE-EEECSSE-----EEEEEECTTSC-EEEE
T ss_pred eEeCCCCCCcceEEECCCCC-EEEEeC--------CCCeEEEECCCCceEE-EEeCCCC-----ceeEEEcCCCc-EEEE
Confidence 33344444566789999997 555431 2568999998875433 2222221 55788999998 4444
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCceeEeCCC---Cccccc
Q 002209 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP---AVYTSL 337 (953)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~~~l~~~---~~~~~~ 337 (953)
... . ....|++++. +|+.+.+... .....+
T Consensus 89 d~~--------------------------------------~--------~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~ 122 (306)
T 2p4o_A 89 GWN--------------------------------------A--------DSIPVVSLVKSDGTVETLLTLPDAIFLNGI 122 (306)
T ss_dssp EEC--------------------------------------T--------TSCEEEEEECTTSCEEEEEECTTCSCEEEE
T ss_pred ecc--------------------------------------C--------CcceEEEEcCCCCeEEEEEeCCCccccCcc
Confidence 100 0 1124777787 7776554321 122233
Q ss_pred ccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEec-cCCCcccCCccccccccCccceeeccCCCCceEE
Q 002209 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELC-DLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYW 416 (953)
Q Consensus 338 ~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~-~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~ 416 (953)
+..+++ .+++.. . ..+.||++|.+++..+... ........+. ........+ +|||+.+++.
T Consensus 123 ~~~~~~-~~~v~d-~-----------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~---~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 123 TPLSDT-QYLTAD-S-----------YRGAIWLIDVVQPSGSIWLEHPMLARSNSE---SVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EESSSS-EEEEEE-T-----------TTTEEEEEETTTTEEEEEEECGGGSCSSTT---CCSCSEEEE--EEETTEEEEE
T ss_pred cccCCC-cEEEEE-C-----------CCCeEEEEeCCCCcEeEEEECCcccccccc---CCCCcCCCc--CcCCCEEEEE
Confidence 334444 343332 1 1237888888754322110 1000000000 000122234 8998765554
Q ss_pred EEeccCCCcccccccCCeEEEEecCCCCC-CC---ceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCC
Q 002209 417 AETQDGGDAKVEVTPRDIIYTQQAEPVQG-EG---PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKD 492 (953)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~g-~~---~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~ 492 (953)
+ ...+.|+++++ ++ ++ .+.+.. ......+++++||+ |+.+ .... .+|++++.++
T Consensus 185 -d-----------~~~~~I~~~~~---~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va-~~~~--~~V~~~~~~G-- 242 (306)
T 2p4o_A 185 -N-----------TEKMLLLRIPV---DSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGA-THIY--NSVVRIAPDR-- 242 (306)
T ss_dssp -E-----------TTTTEEEEEEB---CTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEE-CBTT--CCEEEECTTC--
T ss_pred -e-----------CCCCEEEEEEe---CCCCCCCccEEEec-cCCCCCeEECCCCC-EEEE-eCCC--CeEEEECCCC--
Confidence 2 23468899986 32 22 222222 23456789999996 4444 3322 3688898764
Q ss_pred CCcEEee--cCCCccccCCCCCCCeEec---cCCCEEEEEe
Q 002209 493 VAPRILF--DRSSEDVYSDPGSPMMRRT---STGTYVIAKI 528 (953)
Q Consensus 493 ~~~~~~~--~~~~~~~~~~~~~p~~~~S---pDG~~l~~~~ 528 (953)
+...+. ........+ +.|+ ||+++|+...
T Consensus 243 -~~~~~~~~~~~~~~p~~------~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 243 -STTIIAQAEQGVIGSTA------VAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp -CEEEEECGGGTCTTEEE------EEECCSTTTTTEEEEEE
T ss_pred -CEEEEeecccccCCceE------EEEecccCCCCEEEEEC
Confidence 222221 111111111 6677 7888877665
No 475
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.93 E-value=0.00046 Score=70.86 Aligned_cols=198 Identities=10% Similarity=0.013 Sum_probs=114.2
Q ss_pred ccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002209 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (953)
Q Consensus 191 ~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 270 (953)
.....|+||| +|+.+.. ..+...|.++|+++|+..+-...+.. ......+.+|+.|+.+.
T Consensus 23 ~~Gl~~~~dg-~Lyvstg------~~~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~g~~lyv~t-------- 82 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTG------LYGRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLLNEKLYQVV-------- 82 (266)
T ss_dssp EEEEEECSTT-EEEEEEC------STTTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEE--------
T ss_pred cccEEEeCCC-eEEEECC------CCCCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEeCCEEEEEE--------
Confidence 3567899996 5555431 23467999999999987654333322 11223444567777661
Q ss_pred CCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCCCcccccccCCCCcEEEE
Q 002209 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPSPDEKYILI 348 (953)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~~~~~~~~~SpDG~~l~~ 348 (953)
.....++++|. +++. ..+..+ ......+++||++|+.
T Consensus 83 ----------------------------------------~~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~v 121 (266)
T 2iwa_A 83 ----------------------------------------WLKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYG 121 (266)
T ss_dssp ----------------------------------------TTCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEE
T ss_pred ----------------------------------------ecCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEE
Confidence 03357889998 7643 344322 1234568899999876
Q ss_pred EEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCccc
Q 002209 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (953)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~ 427 (953)
+. . .+.|+++|.++.+ .+.+.-... ..|. .....+.|. ||+ +|...
T Consensus 122 s~-g------------s~~l~viD~~t~~v~~~I~Vg~~--~~p~------~~~nele~~-dg~--lyvn~--------- 168 (266)
T 2iwa_A 122 SD-G------------TSILYEIDPHTFKLIKKHNVKYN--GHRV------IRLNELEYI-NGE--VWANI--------- 168 (266)
T ss_dssp EC-S------------SSEEEEECTTTCCEEEEEECEET--TEEC------CCEEEEEEE-TTE--EEEEE---------
T ss_pred EC-C------------CCeEEEEECCCCcEEEEEEECCC--Cccc------ccceeEEEE-CCE--EEEec---------
Confidence 53 1 2389999998643 444432110 0111 112346677 663 44421
Q ss_pred ccccCCeEEEEecCCCCCCCc-eEEeecc-------------cccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 428 EVTPRDIIYTQQAEPVQGEGP-EILHKLD-------------LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 428 ~~~~~~~l~~~d~~~~~g~~~-~~l~~~~-------------~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
...+.|.++|. ..++. ..+.-.. ....+++|+||+++++.+.... .+|+.+++..
T Consensus 169 --~~~~~V~vID~---~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~---~~v~~i~l~~ 237 (266)
T 2iwa_A 169 --WQTDCIARISA---KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW---PKLFEIKLHL 237 (266)
T ss_dssp --TTSSEEEEEET---TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---SEEEEEEEEE
T ss_pred --CCCCeEEEEEC---CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---CeEEEEEEec
Confidence 23568999995 44443 3342211 1235799999999987765332 3788887654
No 476
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.93 E-value=0.00026 Score=84.42 Aligned_cols=180 Identities=13% Similarity=-0.063 Sum_probs=110.5
Q ss_pred cceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhh
Q 002209 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (953)
Q Consensus 218 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (953)
...|+++++++++...+...... ...++|.+++..||++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~-----p~gla~d~~~~~Ly~sD----------------------------------- 424 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSD----------------------------------- 424 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTT-----CCCCEEETTTTEEEECC-----------------------------------
T ss_pred ccceEEEeCCCCcceeeeccCcc-----eEEEccccccCeEEEEe-----------------------------------
Confidence 35788899988776655433221 45789999888888660
Q ss_pred hcCCcchhhhhhhhccceEEEEEcCC-----ceeEeC-CC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEE
Q 002209 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (953)
Q Consensus 298 ~~~~~~d~~~~~~~~~~~l~~~~~~g-----~~~~l~-~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~ 370 (953)
. ....|++++++| ....+. .. .....+++.+.++.|+++.. ....|++
T Consensus 425 ----~---------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~------------~~~~I~v 479 (699)
T 1n7d_A 425 ----L---------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS------------VLGTVSV 479 (699)
T ss_dssp ----T---------TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT------------TTSCEEE
T ss_pred ----c---------CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec------------cCCeEEE
Confidence 0 224577777733 222222 22 34556778877777766531 1347899
Q ss_pred EeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceE
Q 002209 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (953)
Q Consensus 371 ~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~ 450 (953)
++++++..+.+..... ..++.+++.|++..|++. +. .....|+++++ +|...+.
T Consensus 480 ~d~dg~~~~~l~~~~~------------~~P~giavDp~~g~ly~t-d~----------~~~~~I~~~~~---dG~~~~~ 533 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQG------------SKPRAIVVDPVHGFMYWT-DW----------GTPAKIKKGGL---NGVDIYS 533 (699)
T ss_dssp EBSSSCCEEEECCCSS------------CCCCCEECCSSSSCCEEC-CC----------SSSCCEEBCCS---SSCCCCE
T ss_pred EecCCCceEEEEeCCC------------CCcceEEEccCCCcEEEc-cc----------CCCCeEEEEeC---CCCCeeE
Confidence 9998877665543211 234578899987765443 21 12357888875 5555544
Q ss_pred Eee-cccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 451 LHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 451 l~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
+.. ......+++|+|++++|+++.... .+|+++++++.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~---~~I~~~d~dG~ 572 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 572 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTT---TEEEEECSSSS
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCC---CeEEEEccCCC
Confidence 432 233456799999999998876432 37999999873
No 477
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.88 E-value=0.0034 Score=73.66 Aligned_cols=189 Identities=12% Similarity=0.056 Sum_probs=123.6
Q ss_pred CeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCc
Q 002209 201 KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPK 280 (953)
Q Consensus 201 ~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 280 (953)
..|+|+. ...|..+++++.....+...... .. ...++|.+++..||++..
T Consensus 7 ~~Ll~s~----------~~~I~~i~l~~~~~~~~~~~~~~--~~-~~~l~~d~~~~~lywtD~----------------- 56 (628)
T 4a0p_A 7 AFLLFSR----------RADIRRISLETNNNNVAIPLTGV--KE-ASALDFDVTDNRIYWTDI----------------- 56 (628)
T ss_dssp CEEEEEE----------TTEEEEEESSCTTCEEECCCCSC--SC-EEEEEEETTTTEEEEEET-----------------
T ss_pred cEEEEEe----------CCcEEEEECCCCCcceEEEcCCC--Cc-eEEEEEECCCCEEEEEEC-----------------
Confidence 3678864 56899999998654433222221 11 447889998888887610
Q ss_pred eeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCC-ceeEe-CCC-CcccccccCCCCcEEEEEEecCCccc
Q 002209 281 MQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSF 357 (953)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g-~~~~l-~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~ 357 (953)
....|++++++| ..+.+ ..+ .....+++.+.++.|+++...
T Consensus 57 -------------------------------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~----- 100 (628)
T 4a0p_A 57 -------------------------------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG----- 100 (628)
T ss_dssp -------------------------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT-----
T ss_pred -------------------------------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC-----
Confidence 235788888844 33333 333 456678888888888777521
Q ss_pred cccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEE
Q 002209 358 IVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYT 437 (953)
Q Consensus 358 ~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~ 437 (953)
...|++.+++|+..+.+..... ..++.++..|... .+||++. .....|++
T Consensus 101 -------~~~I~v~~~dG~~~~~l~~~~l------------~~P~~iavdp~~G-~lY~tD~----------g~~~~I~r 150 (628)
T 4a0p_A 101 -------TNRIEVSKLDGQHRQVLVWKDL------------DSPRALALDPAEG-FMYWTEW----------GGKPKIDR 150 (628)
T ss_dssp -------TTEEEEEETTSTTCEEEECSSC------------CCEEEEEEETTTT-EEEEEEC----------SSSCEEEE
T ss_pred -------CCEEEEEecCCCcEEEEEeCCC------------CCcccEEEccCCC-eEEEeCC----------CCCCEEEE
Confidence 2479999999876655543211 2346788988654 4566432 12458999
Q ss_pred EecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 438 QQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 438 ~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
+++ +|...+.+...-....++++++++++|+++.... .+|+.+++++.
T Consensus 151 ~~~---dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~---~~I~~~d~dG~ 198 (628)
T 4a0p_A 151 AAM---DGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDT---NLIESSNMLGL 198 (628)
T ss_dssp EET---TSCSCEEEECSCSSEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EeC---CCCceEEEECCCCCcceEEEccccCEEEEEECCC---CEEEEEcCCCC
Confidence 886 7777766655444556789999999998875432 37999999885
No 478
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.86 E-value=2.4e-05 Score=82.55 Aligned_cols=69 Identities=19% Similarity=0.145 Sum_probs=45.4
Q ss_pred cEEEEcCCCCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCccc---E
Q 002209 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFC---C 786 (953)
Q Consensus 713 ~~V~~~~~~~~~G~G~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~---a 786 (953)
+.|+.++.. +. ...........|+.+.++.+ . ...++.++||||||.+|..++.+. |+.+. .
T Consensus 49 ~~v~~~d~~---~~----~~~~~~~~~a~~~~~~i~~~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~ 116 (283)
T 3tjm_A 49 IPTYGLQCT---RA----APLDSIHSLAAYYIDCIRQV---Q--PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 116 (283)
T ss_dssp SCEEEECCC---TT----SCCSCHHHHHHHHHHHHTTT---C--CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCE
T ss_pred ceEEEEecC---CC----CCCCCHHHHHHHHHHHHHHh---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccce
Confidence 888886662 21 11123455555555544322 1 125899999999999999999865 67788 8
Q ss_pred EEEcccC
Q 002209 787 GIARSGA 793 (953)
Q Consensus 787 ~v~~~~~ 793 (953)
+|++++.
T Consensus 117 lvlid~~ 123 (283)
T 3tjm_A 117 LFLFDGS 123 (283)
T ss_dssp EEEESCC
T ss_pred EEEEcCC
Confidence 8887754
No 479
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.85 E-value=0.0022 Score=69.44 Aligned_cols=180 Identities=13% Similarity=0.053 Sum_probs=92.1
Q ss_pred cceEEEEEc-CCc-eeEeCCC-------CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEE-ec
Q 002209 313 TTQLVLVSL-DGT-VKEIGPP-------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LC 382 (953)
Q Consensus 313 ~~~l~~~~~-~g~-~~~l~~~-------~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~-l~ 382 (953)
...|+++|+ +|+ .+.+..+ .....++++|++..++++.... .....|+++|++++.... +.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---------~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP---------DDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS---------GGGCEEEEEETTTCCEEEECT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc---------CCCCeEEEEECCCCCEEEEec
Confidence 357889998 786 3433221 2346788998877666654210 012378999998555444 32
Q ss_pred cCCCccc--CCccccc--------------cccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCC
Q 002209 383 DLPLAED--IPIAFNS--------------VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE 446 (953)
Q Consensus 383 ~~~~~~~--~p~~~~~--------------~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~ 446 (953)
.++.... .....++ ...+...++|||||+.+++. + .....+|.++.+....+
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~-~-----------~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLS-P-----------MHSTSMYRIKSADLSNL 230 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEE-E-----------SSCSEEEEEEHHHHTCT
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEE-e-----------CCCCeEEEEEHHHhcCC
Confidence 2111100 0000111 01234679999999877665 1 11337888873111111
Q ss_pred Cc--------eEEeecccccCCeeeccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC-CccccCCCCCCCeEe
Q 002209 447 GP--------EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRR 517 (953)
Q Consensus 447 ~~--------~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~ 517 (953)
.. ...........++++++||+ |+++.... .+|++++..++ +...+...+ .....+ +++
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~---~~V~~~d~~~G--~~~~~~~~~~~~~p~~------va~ 298 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAH---SAIGVITSADR--AYKLLVTDEKLSWTDS------FNF 298 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGG---TEEEEEETTTT--EEEEEEECGGGSCEEE------EEE
T ss_pred CCChhhhhcceEecccCCCCceEEECCCCC-EEEEccCC---CeEEEEECCCC--CEEEEEECCceecCCe------eEE
Confidence 10 01112233456799999986 45443332 27899998333 333333221 111111 678
Q ss_pred ccCCCEEE
Q 002209 518 TSTGTYVI 525 (953)
Q Consensus 518 SpDG~~l~ 525 (953)
++||+.++
T Consensus 299 ~~~g~l~v 306 (343)
T 2qe8_A 299 GSDGYLYF 306 (343)
T ss_dssp CTTSCEEE
T ss_pred CCCCcEEE
Confidence 88876433
No 480
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.85 E-value=0.00097 Score=68.42 Aligned_cols=176 Identities=9% Similarity=-0.008 Sum_probs=99.4
Q ss_pred ccceEEEEEc-CCceeE-eCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcc
Q 002209 312 ATTQLVLVSL-DGTVKE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE 388 (953)
Q Consensus 312 ~~~~l~~~~~-~g~~~~-l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~ 388 (953)
+.+.|..+|+ +|+... +.-+.......++++|++|+..... .+.++++|.++.+ .+.+...
T Consensus 42 ~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~------------~~~v~viD~~t~~v~~~i~~g---- 105 (266)
T 2iwa_A 42 GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL------------KNIGFIYDRRTLSNIKNFTHQ---- 105 (266)
T ss_dssp TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT------------CSEEEEEETTTTEEEEEEECC----
T ss_pred CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec------------CCEEEEEECCCCcEEEEEECC----
Confidence 3467999999 886543 3222222222345567777666522 3489999998644 3344321
Q ss_pred cCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecc--c---ccCCeee
Q 002209 389 DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD--L---RYGGISW 463 (953)
Q Consensus 389 ~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~--~---~~~~~~~ 463 (953)
. ......++||+.++.. ++.+.|+++|. .+......+.-+. . ..+.+.|
T Consensus 106 -~----------~~g~glt~Dg~~l~vs-------------~gs~~l~viD~--~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 106 -M----------KDGWGLATDGKILYGS-------------DGTSILYEIDP--HTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp -S----------SSCCEEEECSSSEEEE-------------CSSSEEEEECT--TTCCEEEEEECEETTEECCCEEEEEE
T ss_pred -C----------CCeEEEEECCCEEEEE-------------CCCCeEEEEEC--CCCcEEEEEEECCCCcccccceeEEE
Confidence 0 1235578899876654 33568999984 3333333332211 1 2345677
Q ss_pred ccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC------------C-ccccCCCCCCCeEeccCCCEEEEEeee
Q 002209 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS------------S-EDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (953)
Q Consensus 464 SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~------------~-~~~~~~~~~p~~~~SpDG~~l~~~~~~ 530 (953)
. || +|+...+. .. .|.++|+.++. .....+.. . ....+ ++++|||+.++....
T Consensus 160 ~-dg-~lyvn~~~-~~--~V~vID~~tg~--V~~~I~~~g~~~~~~~~~~~~~~v~nG------Ia~~~~~~~lfVTgk- 225 (266)
T 2iwa_A 160 I-NG-EVWANIWQ-TD--CIARISAKDGT--LLGWILLPNLRKKLIDEGFRDIDVLNG------IAWDQENKRIFVTGK- 225 (266)
T ss_dssp E-TT-EEEEEETT-SS--EEEEEETTTCC--EEEEEECHHHHHHHHHTTCTTCCCEEE------EEEETTTTEEEEEET-
T ss_pred E-CC-EEEEecCC-CC--eEEEEECCCCc--EEEEEECCCcccccccccccccCceEE------EEEcCCCCEEEEECC-
Confidence 7 76 45544433 23 79999999863 22222211 0 01112 789999988776652
Q ss_pred ccCCCcEEEEecCCCCCCCCCCeEEEEECCCC
Q 002209 531 ENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (953)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~~~ 562 (953)
..+.|+++++...
T Consensus 226 -------------------~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 226 -------------------LWPKLFEIKLHLV 238 (266)
T ss_dssp -------------------TCSEEEEEEEEEC
T ss_pred -------------------CCCeEEEEEEecc
Confidence 2457888887554
No 481
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.83 E-value=0.001 Score=72.06 Aligned_cols=68 Identities=9% Similarity=0.000 Sum_probs=38.0
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCc--cccccccceEEecCCeEEEEE
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCT 261 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~~~~wspDg~~l~~~ 261 (953)
.+..+.++|||+ |+++.. .. .......|+++|+++|+..+....+.. ........+++++++..++++
T Consensus 68 ~p~gv~~d~~g~-L~v~D~-g~--~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 68 TVLGIKSDGNGI-VWMLDN-GN--QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp CEEEEEECSSSE-EEEEEC-HH--HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE
T ss_pred EeeEEEEcCCCc-EEEEcC-CC--CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEE
Confidence 566778999986 444321 10 001146899999998874332222211 001114578888876677665
No 482
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.81 E-value=0.011 Score=61.91 Aligned_cols=193 Identities=16% Similarity=0.112 Sum_probs=106.6
Q ss_pred cccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002209 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (953)
Q Consensus 190 ~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 269 (953)
....+.+++||+ |++.. .....|++++.+ ++...+...... .....+++.++|+..+.. .
T Consensus 21 ~p~~i~~d~~g~-l~v~~--------~~~~~v~~~~~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 80 (300)
T 2qc5_A 21 GPYGITSSEDGK-VWFTQ--------HKANKISSLDQS-GRIKEFEVPTPD---AKVMCLIVSSLGDIWFTE-N------ 80 (300)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECTTSCEEEEE-T------
T ss_pred CcceeeECCCCC-EEEEc--------CCCCeEEEECCC-CceEEEECCCCC---CcceeEEECCCCCEEEEe-c------
Confidence 456678899987 44432 125689999988 665543221110 114577788888744432 0
Q ss_pred CCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCceeEeCC--C-CcccccccCCCCcEE
Q 002209 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (953)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~~~l~~--~-~~~~~~~~SpDG~~l 346 (953)
....|++++.+|+.+.+.. . .....++++++|+..
T Consensus 81 ------------------------------------------~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 118 (300)
T 2qc5_A 81 ------------------------------------------GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIW 118 (300)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred ------------------------------------------CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEE
Confidence 2245777777555443332 2 456678889999743
Q ss_pred EEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcc
Q 002209 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (953)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~ 426 (953)
++... ...|+.++.++ ....+.. +.. ...+..+++.+||+ +|+..
T Consensus 119 -v~~~~------------~~~i~~~~~~g-~~~~~~~-~~~----------~~~~~~i~~d~~g~--l~v~~-------- 163 (300)
T 2qc5_A 119 -FTQLN------------GDRIGKLTADG-TIYEYDL-PNK----------GSYPAFITLGSDNA--LWFTE-------- 163 (300)
T ss_dssp -EEETT------------TTEEEEECTTS-CEEEEEC-SST----------TCCEEEEEECTTSS--EEEEE--------
T ss_pred -EEccC------------CCeEEEECCCC-CEEEccC-CCC----------CCCceeEEECCCCC--EEEEe--------
Confidence 33311 23688888873 3333221 100 02345788999997 33321
Q ss_pred cccccCCeEEEEecCCCCCCCceEEee--cccccCCeeeccCCceEEEEEecccCceEEEEEcCCC
Q 002209 427 VEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (953)
Q Consensus 427 ~~~~~~~~l~~~d~~~~~g~~~~~l~~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~~~ 490 (953)
.....|++++. + ++...+.. .......+.++++|+ |+++... .. .|++++.++
T Consensus 164 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~-~~--~i~~~~~~g 218 (300)
T 2qc5_A 164 ---NQNNSIGRITN---T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIM-GN--KIGRITTTG 218 (300)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETT-TT--EEEEECTTC
T ss_pred ---cCCCeEEEECC---C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEccC-CC--EEEEEcCCC
Confidence 12347888873 3 33333321 122345678889885 4444332 22 688998843
No 483
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.81 E-value=0.0023 Score=65.20 Aligned_cols=210 Identities=15% Similarity=0.153 Sum_probs=114.1
Q ss_pred eeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEE
Q 002209 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (953)
Q Consensus 180 ~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~ 259 (953)
+.|.+.. ...+..+|.||+++|+.+.+ +...|+.+|+++...+++.-.+... .+.+++.++|++++
T Consensus 20 ~~l~g~~--~~lSGla~~~~~~~L~aV~d--------~~~~I~~ld~~g~v~~~i~l~g~~D----~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 20 KEIAGIT--NNISSLTWSAQSNTLFSTIN--------KPAAIVEMTTNGDLIRTIPLDFVKD----LETIEYIGDNQFVI 85 (255)
T ss_dssp EECTTCC--SCEEEEEEETTTTEEEEEEE--------TTEEEEEEETTCCEEEEEECSSCSS----EEEEEECSTTEEEE
T ss_pred eECCCcc--cCcceeEEeCCCCEEEEEEC--------CCCeEEEEeCCCCEEEEEecCCCCC----hHHeEEeCCCEEEE
Confidence 4444443 25888999999988887664 3678999999844444442211111 66888998887444
Q ss_pred EEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc--CCce---eEe------
Q 002209 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTV---KEI------ 328 (953)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~--~g~~---~~l------ 328 (953)
.. + +...|+++++ .++. ..+
T Consensus 86 s~----------------------------------------E---------~~~~l~~~~v~~~~~i~~~~~~~~~~~~ 116 (255)
T 3qqz_A 86 SD----------------------------------------E---------RDYAIYVISLTPNSEVKILKKIKIPLQE 116 (255)
T ss_dssp EE----------------------------------------T---------TTTEEEEEEECTTCCEEEEEEEECCCSS
T ss_pred EE----------------------------------------C---------CCCcEEEEEcCCCCeeeeeeeecccccc
Confidence 22 1 1134445544 2211 111
Q ss_pred -CCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEe--ccCceEEEeccCCCcccCCccccccccCcccee
Q 002209 329 -GPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWT--TDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (953)
Q Consensus 329 -~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d--~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (953)
..+.+...++|+|++++|..+..+.+ ..|+.++ +.+...+.+......... ......+++
T Consensus 117 ~~~N~g~EGLA~d~~~~~L~va~E~~p-----------~~i~~~~g~~~~~~l~i~~~~~~~~~~------~~~d~S~l~ 179 (255)
T 3qqz_A 117 SPTNCGFEGLAYSRQDHTFWFFKEKNP-----------IEVYKVNGLLSSNELHISKDKALQRQF------TLDDVSGAE 179 (255)
T ss_dssp CCCSSCCEEEEEETTTTEEEEEEESSS-----------EEEEEEESTTCSSCCEEEECHHHHHTC------CSSCCCEEE
T ss_pred ccccCCcceEEEeCCCCEEEEEECcCC-----------ceEEEEcccccCCceeeecchhhcccc------ccCCceeEE
Confidence 11255678999999999988875542 2555555 111111211110000000 012345788
Q ss_pred eccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecc----------cccCCeeeccCCceEEEEEe
Q 002209 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD----------LRYGGISWCDDSLALVYESW 475 (953)
Q Consensus 406 wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~----------~~~~~~~~SpDg~~l~~~~~ 475 (953)
+.|....++... +....|..+|. +|. +.....-. ....+++|.++|+ |+.+++
T Consensus 180 ~dp~tg~lliLS------------~~s~~L~~~d~---~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE 242 (255)
T 3qqz_A 180 FNQQKNTLLVLS------------HESRALQEVTL---VGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSE 242 (255)
T ss_dssp EETTTTEEEEEE------------TTTTEEEEECT---TCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEET
T ss_pred EcCCCCeEEEEE------------CCCCeEEEEcC---CCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcC
Confidence 888776665552 23456777774 443 33321111 1345689999997 555543
Q ss_pred cccCceEEEEEcCCC
Q 002209 476 YKTRRTRTWVISPGS 490 (953)
Q Consensus 476 ~~~~~~~l~~~d~~~ 490 (953)
.+ .+|++....
T Consensus 243 ~n----~~y~f~~~~ 253 (255)
T 3qqz_A 243 PN----RFYRFTPQS 253 (255)
T ss_dssp TT----EEEEEEC--
T ss_pred Cc----eEEEEEecC
Confidence 32 688876543
No 484
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.77 E-value=0.0057 Score=71.73 Aligned_cols=220 Identities=11% Similarity=0.060 Sum_probs=134.6
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCcccc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~ 243 (953)
.|...++.. .....+..++.-.......|.+++..|+++.. ....|++++++++....+...+...
T Consensus 16 ~I~~i~l~~----~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~--------~~~~I~r~~~~g~~~~~v~~~g~~~-- 81 (628)
T 4a0p_A 16 DIRRISLET----NNNNVAIPLTGVKEASALDFDVTDNRIYWTDI--------SLKTISRAFMNGSALEHVVEFGLDY-- 81 (628)
T ss_dssp EEEEEESSC----TTCEEECCCCSCSCEEEEEEETTTTEEEEEET--------TTTEEEEEETTSCSCEEEECSSCSC--
T ss_pred cEEEEECCC----CCcceEEEcCCCCceEEEEEECCCCEEEEEEC--------CCCeEEEEECCCCCcEEEEeCCCCC--
Confidence 677777732 11111111222124667899999888888642 3578999999987655554322111
Q ss_pred ccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCC
Q 002209 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG 323 (953)
Q Consensus 244 ~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g 323 (953)
...++..+.++.||++. .....|.+++++|
T Consensus 82 --P~GlAvD~~~~~LY~tD------------------------------------------------~~~~~I~v~~~dG 111 (628)
T 4a0p_A 82 --PEGMAVDWLGKNLYWAD------------------------------------------------TGTNRIEVSKLDG 111 (628)
T ss_dssp --CCEEEEETTTTEEEEEE------------------------------------------------TTTTEEEEEETTS
T ss_pred --cceEEEEeCCCEEEEEE------------------------------------------------CCCCEEEEEecCC
Confidence 34677776777787661 0335788889855
Q ss_pred c-eeEeC-CC-CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccC
Q 002209 324 T-VKEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (953)
Q Consensus 324 ~-~~~l~-~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (953)
. .+.+. .. .....+++.|...+|+++.... ...|+..+++|+..+.+... . ..
T Consensus 112 ~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~-----------~~~I~r~~~dG~~~~~l~~~-~------------~~ 167 (628)
T 4a0p_A 112 QHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG-----------KPKIDRAAMDGSERTTLVPN-V------------GR 167 (628)
T ss_dssp TTCEEEECSSCCCEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCSCEEEECS-C------------SS
T ss_pred CcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC-----------CCEEEEEeCCCCceEEEECC-C------------CC
Confidence 3 33333 33 5667889999777787765211 23899999998876665431 1 23
Q ss_pred ccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCc
Q 002209 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (953)
Q Consensus 401 ~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 480 (953)
+..++++++++.| ||++. ..+.|+.+++ +|+..+.+........++++ ++..|+++.+..
T Consensus 168 P~GlalD~~~~~L-Y~aD~-----------~~~~I~~~d~---dG~~~~v~~~~l~~P~glav--~~~~ly~tD~~~--- 227 (628)
T 4a0p_A 168 ANGLTIDYAKRRL-YWTDL-----------DTNLIESSNM---LGLNREVIADDLPHPFGLTQ--YQDYIYWTDWSR--- 227 (628)
T ss_dssp EEEEEEETTTTEE-EEEET-----------TTTEEEEEET---TSCSCEEEEECCSCEEEEEE--ETTEEEEEETTT---
T ss_pred cceEEEccccCEE-EEEEC-----------CCCEEEEEcC---CCCceEEeeccCCCceEEEE--ECCEEEEecCCC---
Confidence 3578999988765 55332 3457899986 66555544433223334555 345777776543
Q ss_pred eEEEEEcCCCC
Q 002209 481 TRTWVISPGSK 491 (953)
Q Consensus 481 ~~l~~~d~~~~ 491 (953)
..|+.++..++
T Consensus 228 ~~I~~~dk~tg 238 (628)
T 4a0p_A 228 RSIERANKTSG 238 (628)
T ss_dssp TEEEEEETTTC
T ss_pred CEEEEEECCCC
Confidence 37899987665
No 485
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.77 E-value=0.0049 Score=65.93 Aligned_cols=145 Identities=12% Similarity=0.039 Sum_probs=77.9
Q ss_pred eEEEEEc-CCceeEeCCC------CcccccccCC-CCcEEEEEEecCCccc-----cccCCCCCcceEEEeccCceEEEe
Q 002209 315 QLVLVSL-DGTVKEIGPP------AVYTSLDPSP-DEKYILISSIHRPYSF-----IVPCGRFPRQVGVWTTDGIFVREL 381 (953)
Q Consensus 315 ~l~~~~~-~g~~~~l~~~------~~~~~~~~Sp-DG~~l~~~~~~~~~~~-----~~~~~~~~~~i~~~d~~g~~~~~l 381 (953)
.|++++. +|+.+.+... .....+++.| ||+ |.++.....+.. ........+.|+.+|.+++..+.+
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 3667776 4554444321 2345688999 895 555432210000 000011234688888876665543
Q ss_pred ccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCC---CCceEEeeccccc
Q 002209 382 CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG---EGPEILHKLDLRY 458 (953)
Q Consensus 382 ~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g---~~~~~l~~~~~~~ 458 (953)
...- ..+..++|+|||+.+++. + .....|+++++ ++ +..+.+....+ .
T Consensus 181 ~~~~-------------~~p~gia~~~dg~~lyv~-d-----------~~~~~I~~~~~---~~~~~~~~~~~~~~~g-P 231 (322)
T 2fp8_A 181 LKEL-------------HVPGGAEVSADSSFVLVA-E-----------FLSHQIVKYWL---EGPKKGTAEVLVKIPN-P 231 (322)
T ss_dssp EEEE-------------SCCCEEEECTTSSEEEEE-E-----------GGGTEEEEEES---SSTTTTCEEEEEECSS-E
T ss_pred ccCC-------------ccCcceEECCCCCEEEEE-e-----------CCCCeEEEEEC---CCCcCCccceEEeCCC-C
Confidence 2210 123468999999865544 2 22457888886 33 23333333233 5
Q ss_pred CCeeeccCCceEEEEEecc-------cCceEEEEEcCCC
Q 002209 459 GGISWCDDSLALVYESWYK-------TRRTRTWVISPGS 490 (953)
Q Consensus 459 ~~~~~SpDg~~l~~~~~~~-------~~~~~l~~~d~~~ 490 (953)
..+.+.+||+ |+.+.... .....|+.++.++
T Consensus 232 ~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 232 GNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG 269 (322)
T ss_dssp EEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS
T ss_pred CCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCC
Confidence 5688999997 44444331 1124788898765
No 486
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.0063 Score=67.96 Aligned_cols=136 Identities=7% Similarity=0.058 Sum_probs=79.6
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce--eecccCCCcc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPLFQSPDIY 241 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~--~~lt~~~~~~ 241 (953)
.|+++++.. +..+.+. +.......++|++||++|+++... .+.....++.++.+++-. +.+.....
T Consensus 160 ~I~~id~~~----~~v~~~~--~~~~~P~~ia~d~~G~~lyvad~~----~~~~~~~v~~~~~~g~~~~~~~l~~~~~-- 227 (430)
T 3tc9_A 160 PTRLIDFEK----EYVSTVY--SGLSKVRTICWTHEADSMIITNDQ----NNNDRPNNYILTRESGFKVITELTKGQN-- 227 (430)
T ss_dssp EEEEEETTT----TEEEEEE--CCCSCEEEEEECTTSSEEEEEECC----SCTTSEEEEEEEGGGTSCSEEEEEECSS--
T ss_pred cEEEEECCC----CEEEEEe--cCCCCcceEEEeCCCCEEEEEeCC----CCcccceEEEEeCCCceeeeeeeccCCC--
Confidence 567777632 3333332 223357789999999988775531 122234567677665432 22222111
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc
Q 002209 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (953)
Q Consensus 242 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 321 (953)
...+++.|++..|+++. ....+|++++.
T Consensus 228 ----p~giavdp~~g~lyv~d------------------------------------------------~~~~~V~~~~~ 255 (430)
T 3tc9_A 228 ----CNGAETHPINGELYFNS------------------------------------------------WNAGQVFRYDF 255 (430)
T ss_dssp ----CCCEEECTTTCCEEEEE------------------------------------------------TTTTEEEEEET
T ss_pred ----ceEEEEeCCCCEEEEEE------------------------------------------------CCCCEEEEEEC
Confidence 34778889554566551 03357889998
Q ss_pred -CCceeEeC-CC--CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccC
Q 002209 322 -DGTVKEIG-PP--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG 375 (953)
Q Consensus 322 -~g~~~~l~-~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g 375 (953)
++....+. .. .....++|+|||++|+++... ...|++++.++
T Consensus 256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~------------~~~I~~~~~d~ 301 (430)
T 3tc9_A 256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN------------QHYILRSDYDW 301 (430)
T ss_dssp TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT------------TTEEEEEEEET
T ss_pred CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC------------CCEEEEEeCCc
Confidence 55542332 21 346678999999988777522 23788888774
No 487
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.65 E-value=0.0041 Score=66.04 Aligned_cols=93 Identities=8% Similarity=0.058 Sum_probs=54.1
Q ss_pred CCCCcEEEEEEecCCccccccCCCCCcceEEEeccC-ceE---EEeccCCCcccCCccccccccCccceeeccCCCCceE
Q 002209 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (953)
Q Consensus 340 SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g-~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~ 415 (953)
+|||++|+++... ...|+++++++ +.. +.+... ..+..+++++||+ + |
T Consensus 175 s~dg~~lyv~d~~------------~~~I~~~~~~~~g~~~~~~~~~~~--------------~~P~gi~vd~dG~-l-~ 226 (306)
T 2p4o_A 175 KRFGNFLYVSNTE------------KMLLLRIPVDSTDKPGEPEIFVEQ--------------TNIDDFAFDVEGN-L-Y 226 (306)
T ss_dssp EEETTEEEEEETT------------TTEEEEEEBCTTSCBCCCEEEEES--------------CCCSSEEEBTTCC-E-E
T ss_pred CcCCCEEEEEeCC------------CCEEEEEEeCCCCCCCccEEEecc--------------CCCCCeEECCCCC-E-E
Confidence 8999988877622 34788998874 221 111110 2345789999995 3 4
Q ss_pred EEEeccCCCcccccccCCeEEEEecCCCCCCCceEEeec---ccccCCeeec---cCCceEEEEEe
Q 002209 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL---DLRYGGISWC---DDSLALVYESW 475 (953)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~~---~~~~~~~~~S---pDg~~l~~~~~ 475 (953)
..+. ..+.|.+++. + ++...+... .....+++|+ ||+++|+.+..
T Consensus 227 va~~-----------~~~~V~~~~~---~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 227 GATH-----------IYNSVVRIAP---D-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EECB-----------TTCCEEEECT---T-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEeC-----------CCCeEEEECC---C-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 4221 2457888873 4 443333111 1234567888 88888777654
No 488
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.63 E-value=0.0055 Score=65.52 Aligned_cols=128 Identities=11% Similarity=0.061 Sum_probs=69.8
Q ss_pred ccccccCC-CCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeecc-CCC
Q 002209 334 YTSLDPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKP 411 (953)
Q Consensus 334 ~~~~~~Sp-DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wsp-Dg~ 411 (953)
...+++++ +| .|++.... ..++++|.+++..+.+...... .+ ...+..+++.+ ||+
T Consensus 82 p~gi~~~~~~g-~l~v~d~~-------------~~i~~~d~~~g~~~~~~~~~~~--~~------~~~p~~i~~d~~~G~ 139 (322)
T 2fp8_A 82 TYDISYNLQNN-QLYIVDCY-------------YHLSVVGSEGGHATQLATSVDG--VP------FKWLYAVTVDQRTGI 139 (322)
T ss_dssp EEEEEEETTTT-EEEEEETT-------------TEEEEECTTCEECEEEESEETT--EE------CSCEEEEEECTTTCC
T ss_pred CceEEEcCCCC-cEEEEECC-------------CCEEEEeCCCCEEEEecccCCC--Cc------ccccceEEEecCCCE
Confidence 45577887 55 45555311 2578888877665555331100 00 01234688999 884
Q ss_pred CceEEEEeccCCCc---c---cccccCCeEEEEecCCCCCCCceEEeecccccCCeeeccCCceEEEEEecccCceEEEE
Q 002209 412 STLYWAETQDGGDA---K---VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWV 485 (953)
Q Consensus 412 ~i~~~~~~~~~~~~---~---~~~~~~~~l~~~d~~~~~g~~~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~ 485 (953)
+|+.+....-.. . ......+.|++++. ++++.+.+.........++|+|||+.|+++.... .+|++
T Consensus 140 --l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~---~~I~~ 211 (322)
T 2fp8_A 140 --VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---STKETTLLLKELHVPGGAEVSADSSFVLVAEFLS---HQIVK 211 (322)
T ss_dssp --EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET---TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGG---TEEEE
T ss_pred --EEEECCcccccccccceehcccCCCceEEEEeC---CCCEEEEeccCCccCcceEECCCCCEEEEEeCCC---CeEEE
Confidence 344332110000 0 00012357888884 4444444433334456789999999888775432 37999
Q ss_pred EcCCCC
Q 002209 486 ISPGSK 491 (953)
Q Consensus 486 ~d~~~~ 491 (953)
+++++.
T Consensus 212 ~~~~~~ 217 (322)
T 2fp8_A 212 YWLEGP 217 (322)
T ss_dssp EESSST
T ss_pred EECCCC
Confidence 988763
No 489
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.49 E-value=0.00038 Score=76.86 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=32.3
Q ss_pred CcEEEEEeChHHHHHHHHHHh--------------------------CCCcccEEEEcccCCC
Q 002209 759 SKIAVGGHSYGAFMTANLLAH--------------------------APHLFCCGIARSGAYN 795 (953)
Q Consensus 759 ~~i~l~G~S~GG~~a~~~a~~--------------------------~p~~~~a~v~~~~~~d 795 (953)
+++.|+||||||.++..++.. +|++++.+|++++...
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~~ 213 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPHN 213 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCTT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCCC
Confidence 689999999999999998876 6889999999987543
No 490
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.46 E-value=0.00068 Score=73.71 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCcEEEEEeChHHHHHHHHHHh-------------------CC------CcccEEEEcccCCC
Q 002209 758 PSKIAVGGHSYGAFMTANLLAH-------------------AP------HLFCCGIARSGAYN 795 (953)
Q Consensus 758 ~~~i~l~G~S~GG~~a~~~a~~-------------------~p------~~~~a~v~~~~~~d 795 (953)
.+++.|+||||||.++..++.+ +| ++++.+|++++...
T Consensus 103 ~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~ 165 (387)
T 2dsn_A 103 GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPHD 165 (387)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTT
T ss_pred CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCCC
Confidence 4689999999999999999872 35 68999999887543
No 491
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.42 E-value=0.028 Score=62.66 Aligned_cols=158 Identities=8% Similarity=0.080 Sum_probs=94.0
Q ss_pred cccceEecc-CCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002209 190 KLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (953)
Q Consensus 190 ~~~~~~wSP-DG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 268 (953)
....++|+| ++..|+++.. ...|+++|++++....+...... ...++|+++|+.|+++......
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~---------~~~I~~id~~~~~v~~~~~~~~~-----P~~ia~d~~G~~lyvad~~~~~- 202 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE---------QHPTRLIDFEKEYVSTVYSGLSK-----VRTICWTHEADSMIITNDQNNN- 202 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB---------TEEEEEEETTTTEEEEEECCCSC-----EEEEEECTTSSEEEEEECCSCT-
T ss_pred CCCEEEECCCCCCeEEEEeC---------CCcEEEEECCCCEEEEEecCCCC-----cceEEEeCCCCEEEEEeCCCCc-
Confidence 456788998 5666666432 17899999998877666442221 4578999999988877110000
Q ss_pred CCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEcCCce---eEeCCCCcccccccCCCCcE
Q 002209 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTV---KEIGPPAVYTSLDPSPDEKY 345 (953)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~g~~---~~l~~~~~~~~~~~SpDG~~ 345 (953)
....++.++.+|.. +.+........++++|++.+
T Consensus 203 -------------------------------------------~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 203 -------------------------------------------DRPNNYILTRESGFKVITELTKGQNCNGAETHPINGE 239 (430)
T ss_dssp -------------------------------------------TSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCC
T ss_pred -------------------------------------------ccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCE
Confidence 01123444443322 22222244567889995556
Q ss_pred EEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCc
Q 002209 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (953)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~ 425 (953)
|+++... ...|++++.+++....+...+.. ..++.++|+|||+.+++. +
T Consensus 240 lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~~-----------~~P~gia~~pdG~~lyv~-d------- 288 (430)
T 3tc9_A 240 LYFNSWN------------AGQVFRYDFTTQETTPLFTIQDS-----------GWEFHIQFHPSGNYAYIV-V------- 288 (430)
T ss_dssp EEEEETT------------TTEEEEEETTTTEEEEEEECSSS-----------SCCEEEEECTTSSEEEEE-E-------
T ss_pred EEEEECC------------CCEEEEEECCCCcEEEEEEcCCC-----------CcceeEEEcCCCCEEEEE-E-------
Confidence 7666522 24799999987766444322110 234679999999855444 2
Q ss_pred ccccccCCeEEEEec
Q 002209 426 KVEVTPRDIIYTQQA 440 (953)
Q Consensus 426 ~~~~~~~~~l~~~d~ 440 (953)
.....|++++.
T Consensus 289 ----~~~~~I~~~~~ 299 (430)
T 3tc9_A 289 ----VNQHYILRSDY 299 (430)
T ss_dssp ----TTTTEEEEEEE
T ss_pred ----CCCCEEEEEeC
Confidence 22457777764
No 492
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.22 E-value=0.0094 Score=60.35 Aligned_cols=194 Identities=10% Similarity=0.127 Sum_probs=108.5
Q ss_pred cceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCceeecccCCCccccccccceEEecCCeEEEEEecCCCCCCCC
Q 002209 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (953)
Q Consensus 192 ~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 271 (953)
....|+ || +|+.+.. ..+...|.++|+++|+..+-...+.. ...-..+++|+.|+...
T Consensus 46 qGL~~~-~~-~LyestG------~~g~S~v~~vD~~Tgkv~~~~~l~~~-----~FgeGit~~g~~ly~lt--------- 103 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTG------LNGRSSIRKVDIESGKTLQQIELGKR-----YFGEGISDWKDKIVGLT--------- 103 (262)
T ss_dssp EEEEEE-TT-EEEEEEE------ETTEEEEEEECTTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEE---------
T ss_pred ceEEEE-CC-EEEEECC------CCCCceEEEEECCCCcEEEEEecCCc-----cceeEEEEeCCEEEEEE---------
Confidence 456787 65 5555442 23467899999999987544333332 11223455677887651
Q ss_pred CCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc-CCce-eEeCCCCcccccccCCCCcEEEEE
Q 002209 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPSPDEKYILIS 349 (953)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~-~g~~-~~l~~~~~~~~~~~SpDG~~l~~~ 349 (953)
.....++++|. +++. ..+.-+. ....+++||++|+.+
T Consensus 104 ---------------------------------------w~~~~v~v~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~S 142 (262)
T 3nol_A 104 ---------------------------------------WKNGLGFVWNIRNLRQVRSFNYDG--EGWGLTHNDQYLIMS 142 (262)
T ss_dssp ---------------------------------------SSSSEEEEEETTTCCEEEEEECSS--CCCCEEECSSCEEEC
T ss_pred ---------------------------------------eeCCEEEEEECccCcEEEEEECCC--CceEEecCCCEEEEE
Confidence 03357889998 7643 3443322 445777899987766
Q ss_pred EecCCccccccCCCCCcceEEEeccCc-eEEEeccCCCcccCCccccccccCccceeeccCCCCceEEEEeccCCCcccc
Q 002209 350 SIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (953)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~~~d~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~ 428 (953)
.. ...|+++|.++. ..+.+.-.. ...|. .....+.|. ||+ +|...
T Consensus 143 dG-------------s~~i~~iDp~T~~v~~~I~V~~--~g~~~------~~lNELe~~-~G~--lyan~---------- 188 (262)
T 3nol_A 143 DG-------------TPVLRFLDPESLTPVRTITVTA--HGEEL------PELNELEWV-DGE--IFANV---------- 188 (262)
T ss_dssp CS-------------SSEEEEECTTTCSEEEEEECEE--TTEEC------CCEEEEEEE-TTE--EEEEE----------
T ss_pred CC-------------CCeEEEEcCCCCeEEEEEEecc--CCccc------cccceeEEE-CCE--EEEEE----------
Confidence 41 237999998853 334433311 00111 111235676 674 44411
Q ss_pred cccCCeEEEEecCCCCCCCceEEeec------------ccccCCeeeccCCceEEEEEecccCceEEEEEcC
Q 002209 429 VTPRDIIYTQQAEPVQGEGPEILHKL------------DLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (953)
Q Consensus 429 ~~~~~~l~~~d~~~~~g~~~~~l~~~------------~~~~~~~~~SpDg~~l~~~~~~~~~~~~l~~~d~ 488 (953)
...+.|.++|. .+|.-...+.-. ....++++|+|++++|+.+... ..+||.+.+
T Consensus 189 -w~~~~I~vIDp--~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~---Wp~~~ev~~ 254 (262)
T 3nol_A 189 -WQTNKIVRIDP--ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL---WPKVFEITL 254 (262)
T ss_dssp -TTSSEEEEECT--TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT---CSEEEEEEE
T ss_pred -ccCCeEEEEEC--CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC---CCceEEEEE
Confidence 23457888884 443322333221 0123569999999998877532 236666543
No 493
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.22 E-value=0.0029 Score=63.83 Aligned_cols=152 Identities=15% Similarity=0.092 Sum_probs=85.1
Q ss_pred eEEEEEEcCCCcEEEEEEEcCCCCCCCCCCCccEEEEeCCCCCcCcCC-CCcccCCCCCCCCcc---chHHHHHHHcCcE
Q 002209 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDA-AGQVRGSPNEFPRIG---STSVLLWLARGFA 714 (953)
Q Consensus 639 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~la~~G~~ 714 (953)
.-.+.+....|..+..|++.... ++. ..|++|+++|||..+.-. .....-||..+..-+ ......|.+. ..
T Consensus 21 sGy~~v~~~~~~~lFywf~es~~-~~~---~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-an 95 (255)
T 1whs_A 21 SGYITVDEGAGRSLFYLLQEAPE-DAQ---PAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKV-AN 95 (255)
T ss_dssp EEEEEEETTTTEEEEEEEECCCG-GGC---SCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGT-SE
T ss_pred EEEEECCCCCCcEEEEEEEEecC-CCC---CCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccccc-CC
Confidence 34566665567888888875432 222 379999999999776543 111112222221000 0000012222 45
Q ss_pred EEEcCCCCCCCCCChhhhhh----hHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEEeChHHHHHHHHHHhC-----C-Cc
Q 002209 715 ILGGPTTPIIGEGDEEANDR----FVEQLVACAEAAVEEVVR-RGVAHPSKIAVGGHSYGAFMTANLLAHA-----P-HL 783 (953)
Q Consensus 715 V~~~~~~~~~G~G~~~~~~~----~~~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p-~~ 783 (953)
|+..|..-..|+........ .......|+..+++...+ .+.....++.|+|.||||..+..+|..- + -.
T Consensus 96 vlfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~in 175 (255)
T 1whs_A 96 VLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVIN 175 (255)
T ss_dssp EEEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCE
T ss_pred EEEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccc
Confidence 55544322334433222211 234566777777765444 4455567899999999999987777521 1 24
Q ss_pred ccEEEEcccCCC
Q 002209 784 FCCGIARSGAYN 795 (953)
Q Consensus 784 ~~a~v~~~~~~d 795 (953)
++++++..|+.|
T Consensus 176 LkGi~ign~~~d 187 (255)
T 1whs_A 176 LKGFMVGNGLID 187 (255)
T ss_dssp EEEEEEEEECCB
T ss_pred cceEEecCCccC
Confidence 788998888765
No 494
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.22 E-value=0.013 Score=63.71 Aligned_cols=83 Identities=13% Similarity=0.027 Sum_probs=52.2
Q ss_pred ccceEEEEEc-CCceeEeCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceE---EEeccCCCc
Q 002209 312 ATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV---RELCDLPLA 387 (953)
Q Consensus 312 ~~~~l~~~~~-~g~~~~l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~---~~l~~~~~~ 387 (953)
..+.|+++++ ++....+. ..++.++|||+| +++...+ +.+.+|+.++++. +.+...+..
T Consensus 144 ~dG~L~v~dl~~~~~~~~~--~~Vs~v~WSpkG--~~vg~~d-------------g~i~~~~~~~~~~~~k~~I~~Pp~~ 206 (388)
T 1xip_A 144 SVNDLSALDLRTKSTKQLA--QNVTSFDVTNSQ--LAVLLKD-------------RSFQSFAWRNGEMEKQFEFSLPSEL 206 (388)
T ss_dssp TTSEEEEEETTTCCEEEEE--ESEEEEEECSSE--EEEEETT-------------SCEEEEEEETTEEEEEEEECCCHHH
T ss_pred CCCCEEEEEccCCcccccc--CCceEEEEcCCc--eEEEEcC-------------CcEEEEcCCCccccccceecCCccc
Confidence 3468889999 67655443 478899999999 4444422 3788899988774 344332211
Q ss_pred c-cCCccccccccCccceeeccCCCCceEE
Q 002209 388 E-DIPIAFNSVRKGMRSINWRSDKPSTLYW 416 (953)
Q Consensus 388 ~-~~p~~~~~~~~~~~~~~wspDg~~i~~~ 416 (953)
. .. +....+.++.|.++++.++.+
T Consensus 207 ~~~~-----~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 207 EELP-----VEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp HTSC-----TTTSEEEEEEESSSSEEEEEE
T ss_pred cccc-----CCCeeEEEEEEecCCeEEEEE
Confidence 0 00 011345679999999866544
No 495
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.15 E-value=0.089 Score=53.44 Aligned_cols=115 Identities=14% Similarity=0.200 Sum_probs=71.0
Q ss_pred CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCceEEEeccCCCcccCCccccccccCccceeeccCCC
Q 002209 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (953)
Q Consensus 332 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~wspDg~ 411 (953)
..++.++|+||++.|+.+.+. +..|+.+|+++...+.+..... .....+++.+||.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~------------~~~I~~ld~~g~v~~~i~l~g~------------~D~EGIa~~~~g~ 82 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK------------PAAIVEMTTNGDLIRTIPLDFV------------KDLETIEYIGDNQ 82 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET------------TEEEEEEETTCCEEEEEECSSC------------SSEEEEEECSTTE
T ss_pred cCcceeEEeCCCCEEEEEECC------------CCeEEEEeCCCCEEEEEecCCC------------CChHHeEEeCCCE
Confidence 567889999999988877744 2378899998766666543111 1124577887774
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEE---e------ecccccCCeeeccCCceEEEEEecccCceE
Q 002209 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL---H------KLDLRYGGISWCDDSLALVYESWYKTRRTR 482 (953)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l---~------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 482 (953)
++.++. ..+.++++++ ...+....+ . .......+++|+|++++|+.+..+.. ..
T Consensus 83 --~~vs~E-----------~~~~l~~~~v--~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p--~~ 145 (255)
T 3qqz_A 83 --FVISDE-----------RDYAIYVISL--TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP--IE 145 (255)
T ss_dssp --EEEEET-----------TTTEEEEEEE--CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS--EE
T ss_pred --EEEEEC-----------CCCcEEEEEc--CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC--ce
Confidence 333222 2346777765 122221211 1 11223467999999999888776653 37
Q ss_pred EEEEc
Q 002209 483 TWVIS 487 (953)
Q Consensus 483 l~~~d 487 (953)
||.++
T Consensus 146 i~~~~ 150 (255)
T 3qqz_A 146 VYKVN 150 (255)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 89887
No 496
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.09 E-value=0.016 Score=58.64 Aligned_cols=167 Identities=10% Similarity=0.052 Sum_probs=90.1
Q ss_pred ccceEEEEEc-CCceeE-eCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCc-eEEEeccCCCcc
Q 002209 312 ATTQLVLVSL-DGTVKE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAE 388 (953)
Q Consensus 312 ~~~~l~~~~~-~g~~~~-l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~-~~~~l~~~~~~~ 388 (953)
+.+.|.++|+ +|++.. +.-+..+..-.++++|++|...... .+.++++|.++. ..+++....
T Consensus 63 g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------------~~~v~v~D~~t~~~~~ti~~~~--- 127 (262)
T 3nol_A 63 GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------------NGLGFVWNIRNLRQVRSFNYDG--- 127 (262)
T ss_dssp TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTCCEEEEEECSS---
T ss_pred CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee------------CCEEEEEECccCcEEEEEECCC---
Confidence 4578999999 886433 3222333233356678888666422 348999999854 344444311
Q ss_pred cCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEee--ccccc---CCeee
Q 002209 389 DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRY---GGISW 463 (953)
Q Consensus 389 ~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~~--~~~~~---~~~~~ 463 (953)
.....++||+.++.. ++.+.|+.+|. .+......+.- ....+ +.+.|
T Consensus 128 -------------eG~glt~dg~~L~~S-------------dGs~~i~~iDp--~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 128 -------------EGWGLTHNDQYLIMS-------------DGTPVLRFLDP--ESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp -------------CCCCEEECSSCEEEC-------------CSSSEEEEECT--TTCSEEEEEECEETTEECCCEEEEEE
T ss_pred -------------CceEEecCCCEEEEE-------------CCCCeEEEEcC--CCCeEEEEEEeccCCccccccceeEE
Confidence 134567888765443 34568999984 33333333322 12222 23667
Q ss_pred ccCCceEEEEEecccCceEEEEEcCCCCCCCcEEeecCC-C-ccc---cCCCCCCC-eEeccCCCEEEEEe
Q 002209 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS-S-EDV---YSDPGSPM-MRRTSTGTYVIAKI 528 (953)
Q Consensus 464 SpDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~-~~~---~~~~~~p~-~~~SpDG~~l~~~~ 528 (953)
. ||+ |+...+.. . .|.++|+.++ +.....+.. . ... ......+. ++++|+++.|+...
T Consensus 180 ~-~G~-lyan~w~~-~--~I~vIDp~tG--~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 180 V-DGE-IFANVWQT-N--KIVRIDPETG--KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp E-TTE-EEEEETTS-S--EEEEECTTTC--BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred E-CCE-EEEEEccC-C--eEEEEECCCC--cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 6 674 66554443 2 7999999986 332222221 0 000 00000111 78888888777665
No 497
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.00 E-value=0.03 Score=60.50 Aligned_cols=235 Identities=11% Similarity=-0.013 Sum_probs=0.0
Q ss_pred ceecCCCCEEEEEecCCCCCccccccccceeceEEecCCCCCCcceeeeeceEEEEccCCCCCCceeeeecCC----CCC
Q 002209 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP----DGA 189 (953)
Q Consensus 114 ~~~SPDG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~g~~~~~~~l~~~~----~~~ 189 (953)
++|+|||+ |.++... +.|++++ + +....+..++ ...
T Consensus 36 ia~~pdG~-l~V~e~~---------------------------------g~I~~i~--~----g~~~~~~~~~v~~~g~~ 75 (352)
T 2ism_A 36 LAFLPDGG-MLIAERP---------------------------------GRIRLFR--E----GRLSTYAELSVYHRGES 75 (352)
T ss_dssp EEECTTSC-EEEEETT---------------------------------TEEEEEE--T----TEEEEEEECCCCCSTTC
T ss_pred EEEcCCCe-EEEEeCC---------------------------------CeEEEEE--C----CCccEeecceEeecCCC
Q ss_pred cccceEeccC---CCeEEEEEeeccccCCCCc---ceEEEEECCCC---ceeecccCCC--ccccccccceEEecCCeEE
Q 002209 190 KLNFVTWSQD---GKHLAFSIRIDAEDSSSSK---LRVWVADVDTG---KARPLFQSPD--IYLNAIFDNFVWVNNSTLL 258 (953)
Q Consensus 190 ~~~~~~wSPD---G~~laf~~~~~~~~~~~~~---~~l~~~d~~~g---~~~~lt~~~~--~~~~~~~~~~~wspDg~~l 258 (953)
.....+|+|| +.+|+++.. .... ..|++++.+++ +.+.+...-. .........++|.||| .|
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~------~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~L 148 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRT------VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-ML 148 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEE------ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CE
T ss_pred CceeEEECCCCCCCCEEEEEEe------cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CE
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhcc---------------ceEEEEEcCC
Q 002209 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYAT---------------TQLVLVSLDG 323 (953)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---------------~~l~~~~~~g 323 (953)
+++ .. +.|++++.+|
T Consensus 149 yv~--------------------------------------------------~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 149 YVT--------------------------------------------------TGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEE--------------------------------------------------CCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEE--------------------------------------------------ECCCCCCccccCCCCCceEEEEEcCCC
Q ss_pred --------------ceeEeCCC-CcccccccCC-CCcEEEEEEecCCccccccCCCCCcceEEEeccCce-----EEEec
Q 002209 324 --------------TVKEIGPP-AVYTSLDPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-----VRELC 382 (953)
Q Consensus 324 --------------~~~~l~~~-~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-----~~~l~ 382 (953)
....+..+ .+...++|+| +| ++|+.+..... ..++.
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g-----------------------~l~v~d~g~~~~~~~~~dei~ 235 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTG-----------------------ELFSSEHGPSGEQGYGHDEVN 235 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTC-----------------------CEEEEEECC------CCCEEE
T ss_pred CCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCC-----------------------CEEEEEcCCCCCCCCCCeEEE
Q ss_pred cCCCcc----------------cCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCC
Q 002209 383 DLPLAE----------------DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE 446 (953)
Q Consensus 383 ~~~~~~----------------~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~ 446 (953)
...... ..|...-.....+..++| .+|+.++-- .....|+++++ ++.
T Consensus 236 ~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~-------------~~~~~v~~v~~---~~~ 298 (352)
T 2ism_A 236 LIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAG-------------LRGQALLRLVL---EGE 298 (352)
T ss_dssp EECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEE-------------TTTTEEEEEEE---EEE
T ss_pred EeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEE-------------CCCCEEEEEEE---CCC
Q ss_pred C-------ceEEeecccccCCeeeccCCceEEEEEecccCce-------EEEEE
Q 002209 447 G-------PEILHKLDLRYGGISWCDDSLALVYESWYKTRRT-------RTWVI 486 (953)
Q Consensus 447 ~-------~~~l~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~-------~l~~~ 486 (953)
. ...+.........+++.||| .|+++.+...++. +||++
T Consensus 299 ~~~~~~~~~~~~~~~~~rp~~v~~~pdG-~lyv~~~~~~g~g~~~~~~~~i~ri 351 (352)
T 2ism_A 299 RGRWRVLRVETALSGFGRLREVQVGPDG-ALYVTTSNRDGRGQVRPGDDRVLRL 351 (352)
T ss_dssp TTEEEEEEEEEEEESSCCEEEEEECTTS-CEEEEECSTTTTSCCCTTCSCEEEE
T ss_pred CcceeecchheecccCCCeeEEEECCCC-cEEEEEeCCCCCCCCCCCCCEEEEe
No 498
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=96.98 E-value=0.0038 Score=70.30 Aligned_cols=59 Identities=29% Similarity=0.303 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcccEEEEcccCC
Q 002209 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (953)
Q Consensus 736 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (953)
.++.+.|+...++++.........+++++|.||||.+|+++-.++|+.|.|+++-+++.
T Consensus 105 ~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 105 VEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 67889999999999988755556799999999999999999999999999999887753
No 499
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.86 E-value=0.051 Score=54.47 Aligned_cols=132 Identities=12% Similarity=0.105 Sum_probs=75.0
Q ss_pred ccceEEEEEc-CCceeE-eCCCCcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEeccCce-EEEeccCCCcc
Q 002209 312 ATTQLVLVSL-DGTVKE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE 388 (953)
Q Consensus 312 ~~~~l~~~~~-~g~~~~-l~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~g~~-~~~l~~~~~~~ 388 (953)
+.+.|..+|+ +|++.. +.-+..+......++|++|...... .+.++++|.++.+ .+.+....
T Consensus 41 g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------------~~~v~v~D~~tl~~~~ti~~~~--- 105 (243)
T 3mbr_X 41 GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------------NHEGFVYDLATLTPRARFRYPG--- 105 (243)
T ss_dssp TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTTEEEEEEECSS---
T ss_pred CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------------CCEEEEEECCcCcEEEEEeCCC---
Confidence 5578999999 886543 3222333333445567777666422 3489999998544 34443311
Q ss_pred cCCccccccccCccceeeccCCCCceEEEEeccCCCcccccccCCeEEEEecCCCCCCCceEEe--ecccc---cCCeee
Q 002209 389 DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLR---YGGISW 463 (953)
Q Consensus 389 ~~p~~~~~~~~~~~~~~wspDg~~i~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~g~~~~~l~--~~~~~---~~~~~~ 463 (953)
.....++||+.++.. ++.+.|+++|. .+....+.+. ..... .+.+.|
T Consensus 106 -------------~Gwglt~dg~~L~vS-------------dgs~~l~~iDp--~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 106 -------------EGWALTSDDSHLYMS-------------DGTAVIRKLDP--DTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp -------------CCCEEEECSSCEEEE-------------CSSSEEEEECT--TTCCEEEEEECEETTEECCCEEEEEE
T ss_pred -------------CceEEeeCCCEEEEE-------------CCCCeEEEEeC--CCCeEEEEEEEccCCcccccceeeEE
Confidence 134566788766554 34568999984 3333333332 21111 223455
Q ss_pred ccCCceEEEEEecccCceEEEEEcCCCC
Q 002209 464 CDDSLALVYESWYKTRRTRTWVISPGSK 491 (953)
Q Consensus 464 SpDg~~l~~~~~~~~~~~~l~~~d~~~~ 491 (953)
. +|+ |+...+.. . .|.++|+.++
T Consensus 158 ~-~G~-lyanvw~s-~--~I~vIDp~tG 180 (243)
T 3mbr_X 158 V-NGE-LLANVWLT-S--RIARIDPASG 180 (243)
T ss_dssp E-TTE-EEEEETTT-T--EEEEECTTTC
T ss_pred e-CCE-EEEEECCC-C--eEEEEECCCC
Confidence 4 565 55444433 2 7999999986
No 500
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.77 E-value=0.11 Score=57.81 Aligned_cols=134 Identities=10% Similarity=0.009 Sum_probs=73.6
Q ss_pred ceEEEEccCCCCCCceeeeecCCCCCcccceEeccCCCeEEEEEeeccccCCCCcceEEEEECCCCce--eecccCCCcc
Q 002209 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPLFQSPDIY 241 (953)
Q Consensus 164 ~i~i~~~~~~g~~~~~~~l~~~~~~~~~~~~~wSPDG~~laf~~~~~~~~~~~~~~~l~~~d~~~g~~--~~lt~~~~~~ 241 (953)
.|+.++..+ +....+. ........++|+|||+ |+++.. . .......++.++..++.. ..+.....
T Consensus 163 ~I~~id~~~----g~v~~~~--~~~~~P~giavd~dG~-lyVad~-~---~~~~~~gv~~~~~~~~~~~~~~~~~~~~-- 229 (433)
T 4hw6_A 163 AFRHVDFVN----QYVDIKT--TNIGQCADVNFTLNGD-MVVVDD-Q---SSDTNTGIYLFTRASGFTERLSLCNARG-- 229 (433)
T ss_dssp CEEEEETTT----TEEEEEC--CCCSCEEEEEECTTCC-EEEEEC-C---SCTTSEEEEEECGGGTTCCEEEEEECSS--
T ss_pred CEEEEECCC----CEEEEee--cCCCCccEEEECCCCC-EEEEcC-C---CCcccceEEEEECCCCeeccccccccCC--
Confidence 567777632 3333332 2223567889999999 655432 1 111233466666554332 11211111
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeecCCCccccchhhhhhcCCcchhhhhhhhccceEEEEEc
Q 002209 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (953)
Q Consensus 242 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 321 (953)
...+++.|++..|+++. .....|++++.
T Consensus 230 ----P~giavd~~~G~lyv~d------------------------------------------------~~~~~V~~~d~ 257 (433)
T 4hw6_A 230 ----AKTCAVHPQNGKIYYTR------------------------------------------------YHHAMISSYDP 257 (433)
T ss_dssp ----BCCCEECTTTCCEEECB------------------------------------------------TTCSEEEEECT
T ss_pred ----CCEEEEeCCCCeEEEEE------------------------------------------------CCCCEEEEEEC
Confidence 34677888444566540 02357888888
Q ss_pred -CCce-eEeCC-C--CcccccccCCCCcEEEEEEecCCccccccCCCCCcceEEEecc
Q 002209 322 -DGTV-KEIGP-P--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (953)
Q Consensus 322 -~g~~-~~l~~-~--~~~~~~~~SpDG~~l~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 374 (953)
+|.. +.+.. . .....++|+|||++|+++... ...|+.++.+
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~------------~~~I~~~~~d 303 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG------------KHCIYRVDYN 303 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT------------TTEEEEEEBC
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC------------CCEEEEEeCC
Confidence 6765 33321 1 222358999999988777622 2378887776
Done!