Your job contains 1 sequence.
>002210
MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVP
SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL
TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE
PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK
FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD
KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL
VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS
PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD
SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM
HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI
EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLV
AGDSVDVVKNMLSSAFLEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV
GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE
EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA
LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL
NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDCQI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002210
(953 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165199 - symbol:PHYC "phytochrome C" species:... 3314 0. 1
TAIR|locus:2012300 - symbol:PHYA "phytochrome A" species:... 2959 2.0e-308 1
TAIR|locus:2005515 - symbol:PHYB "AT2G18790" species:3702... 2810 1.3e-292 1
UNIPROTKB|P06593 - symbol:PHYA3 "Phytochrome A type 3" sp... 2780 1.9e-289 1
TAIR|locus:2005535 - symbol:PHYD "phytochrome D" species:... 2698 9.3e-281 1
TAIR|locus:2005536 - symbol:PHYE "phytochrome E" species:... 2468 2.2e-256 1
UNIPROTKB|Q55168 - symbol:cph1 "Phytochrome-like protein ... 670 7.4e-66 1
UNIPROTKB|Q48G81 - symbol:bphP "Bacteriophytochrome histi... 446 2.4e-42 2
UNIPROTKB|Q4K656 - symbol:bphP "Bacteriophytochrome histi... 459 1.9e-40 1
UNIPROTKB|Q7CY45 - symbol:Atu1990 "Bacteriophytochrome pr... 452 6.5e-39 2
ASPGD|ASPL0000049609 - symbol:fphA species:162425 "Emeric... 377 1.3e-30 2
UNIPROTKB|G4MU11 - symbol:MGG_12377 "Phytochrome-1" speci... 381 2.5e-29 2
UNIPROTKB|Q55434 - symbol:cph2 "Phytochrome-like protein ... 175 8.9e-09 2
>TAIR|locus:2165199 [details] [associations]
symbol:PHYC "phytochrome C" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008020
"G-protein coupled photoreceptor activity" evidence=IEA]
[GO:0009584 "detection of visible light" evidence=IEA] [GO:0009585
"red, far-red light phototransduction" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017006 "protein-tetrapyrrole linkage"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 GO:GO:0023014 GO:GO:0018298 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0008020 EMBL:AB005236 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17343 EMBL:Z32538 IPI:IPI00516887
PIR:C33473 RefSeq:NP_198433.1 UniGene:At.97
ProteinModelPortal:P14714 SMR:P14714 IntAct:P14714 STRING:P14714
PaxDb:P14714 PRIDE:P14714 EnsemblPlants:AT5G35840.1 GeneID:833570
KEGG:ath:AT5G35840 TAIR:At5g35840 InParanoid:P14714 OMA:LYGDNLR
PhylomeDB:P14714 Genevestigator:P14714 GermOnline:AT5G35840
Uniprot:P14714
Length = 1111
Score = 3314 (1171.6 bits), Expect = 0., P = 0.
Identities = 618/954 (64%), Positives = 780/954 (81%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYXXXXXXXXXXXXXX--XXXX 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDY
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 XAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +DG ++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRDG-KRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQEE---HSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 721
SV+ VKNML+ A EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 722 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 781
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 782 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 840
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 841 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 900
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 901 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY---DC 951
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y DC
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDC 952
>TAIR|locus:2012300 [details] [associations]
symbol:PHYA "phytochrome A" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009638 "phototropism" evidence=IMP]
[GO:0009630 "gravitropism" evidence=RCA;IMP] [GO:0016604 "nuclear
body" evidence=IDA] [GO:0010161 "red light signaling pathway"
evidence=IMP] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA;IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0031516 "far-red light photoreceptor activity"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010017 "red or far-red light signaling pathway" evidence=RCA]
[GO:0009883 "red or far-red light photoreceptor activity"
evidence=TAS] [GO:0010201 "response to continuous far red light
stimulus by the high-irradiance response system" evidence=IMP]
[GO:0010203 "response to very low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
GO:GO:0005737 GO:GO:0016020 GO:GO:0006355 GO:GO:0017148
GO:GO:0046685 GO:GO:0016607 GO:GO:0006351 GO:GO:0009640
GO:GO:0009630 EMBL:AC003970 GO:GO:0023014 GO:GO:0018298
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0016604 GO:GO:0010161 GO:GO:0010201 GO:GO:0009638
GO:GO:0008020 GO:GO:0017006 EMBL:X17341 EMBL:L21154 EMBL:AY039520
IPI:IPI00535033 IPI:IPI00891850 PIR:A33473 PIR:D86229
RefSeq:NP_001117256.1 RefSeq:NP_172428.1 UniGene:At.22828
ProteinModelPortal:P14712 SMR:P14712 IntAct:P14712
MINT:MINT-1174780 STRING:P14712 PaxDb:P14712 PRIDE:P14712
EnsemblPlants:AT1G09570.1 GeneID:837483 KEGG:ath:AT1G09570
TAIR:At1g09570 HOGENOM:HOG000272703 InParanoid:P14712 KO:K12120
OMA:RWGGAKH PhylomeDB:P14712 ProtClustDB:CLSN2679275
Genevestigator:P14712 GermOnline:AT1G09570 GO:GO:0031516
GO:GO:0010203 Uniprot:P14712
Length = 1122
Score = 2959 (1046.7 bits), Expect = 2.0e-308, P = 2.0e-308
Identities = 563/957 (58%), Positives = 720/957 (75%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYXXXXXXXXXXXXX--- 59
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDY
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 60 -XXXXXXAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 710
G + LV SV++VK ML +A EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 711 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 771 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 830
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ QD +K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 841
Query: 831 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 890
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 901
Query: 891 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+DD+D+ESI E
Sbjct: 902 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIE 958
>TAIR|locus:2005515 [details] [associations]
symbol:PHYB "AT2G18790" species:3702 "Arabidopsis
thaliana" [GO:0004673 "protein histidine kinase activity"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009649 "entrainment of circadian clock"
evidence=IMP] [GO:0009883 "red or far-red light photoreceptor
activity" evidence=IMP] [GO:0009638 "phototropism" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0009630
"gravitropism" evidence=RCA;IMP] [GO:0009687 "abscisic acid
metabolic process" evidence=IMP] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0010617 "circadian regulation of calcium
ion oscillation" evidence=IMP] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0031347 "regulation of defense
response" evidence=IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0015979 "photosynthesis" evidence=IMP] [GO:0006325 "chromatin
organization" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0010017 "red or far-red light signaling pathway"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0031516 "far-red light photoreceptor activity"
evidence=IDA] [GO:0031517 "red light photoreceptor activity"
evidence=IDA] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0010202 "response to low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 GO:GO:0006355 GO:GO:0016607 GO:GO:0009649
GO:GO:0009409 GO:GO:0006351 GO:GO:0010148 GO:GO:0009630
GO:GO:0009687 GO:GO:0023014 GO:GO:0018298 TIGRFAMs:TIGR00229
GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0010029 GO:GO:0000160 GO:GO:0015979 GO:GO:0006325
GO:GO:0010161 EMBL:AC005724 GO:GO:0009867 GO:GO:0010374
GO:GO:0031347 GO:GO:0010617 GO:GO:0009638 GO:GO:0008020
GO:GO:0009883 eggNOG:COG4251 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17342 EMBL:L09262 EMBL:AY466496
IPI:IPI00521343 PIR:B33473 RefSeq:NP_179469.1 UniGene:At.96
ProteinModelPortal:P14713 SMR:P14713 DIP:DIP-31742N IntAct:P14713
MINT:MINT-192399 STRING:P14713 PaxDb:P14713 PRIDE:P14713
ProMEX:P14713 EnsemblPlants:AT2G18790.1 GeneID:816394
KEGG:ath:AT2G18790 TAIR:At2g18790 InParanoid:P14713 KO:K12121
OMA:AVAYITK PhylomeDB:P14713 Genevestigator:P14713
GermOnline:AT2G18790 GO:GO:0010202 Uniprot:P14713
Length = 1172
Score = 2810 (994.2 bits), Expect = 1.3e-292, P = 1.3e-292
Identities = 557/955 (58%), Positives = 691/955 (72%)
Query: 12 SRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYXXXXXXXXXXXXXXXX 62
S + S R + N ++ Q ++DA+L F++S FDY
Sbjct: 40 SGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQ 99
Query: 63 XXXAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTL 122
AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +E+ + L +
Sbjct: 100 QITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLEKPEILAM 159
Query: 123 GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPV 182
G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG+VIDLEP
Sbjct: 160 GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPA 219
Query: 183 NPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFH 242
+D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYDRVMVYKFH
Sbjct: 220 RTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDRVMVYKFH 279
Query: 243 EDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKK 302
EDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +
Sbjct: 280 EDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPVLVVQDDR 339
Query: 303 LDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWG 359
L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N GR +LWG
Sbjct: 340 LTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSN-VASGRSSMRLWG 398
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRD
Sbjct: 399 LVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRD 458
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
SP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H STGLST
Sbjct: 459 SPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTGLST 518
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD G++
Sbjct: 519 DSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 578
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV--PSV 596
MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++ V P
Sbjct: 579 MHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVDGVVQPCR 638
Query: 597 DDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA 655
D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +
Sbjct: 639 DMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKS 698
Query: 656 LV-DLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKE 712
LV DL+ ++ V +LS A EE+NVE+KL+ F P V +VVNAC ++D
Sbjct: 699 LVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLN 758
Query: 713 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGME 772
N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CLEWN ME
Sbjct: 759 NIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNMAME 818
Query: 773 KLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFD 832
KL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK F FFD
Sbjct: 819 KLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFD 875
Query: 833 QQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYI 892
+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR + +L YI
Sbjct: 876 RNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYI 935
Query: 893 RREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
+ I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESIE+
Sbjct: 936 CQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESIED 990
>UNIPROTKB|P06593 [details] [associations]
symbol:PHYA3 "Phytochrome A type 3" species:4498 "Avena
sativa" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR001294
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR012129
InterPro:IPR013515 InterPro:IPR013516 InterPro:IPR013654
InterPro:IPR013767 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 GO:GO:0000160 GO:GO:0008020
EMBL:X03242 EMBL:M18822 PIR:A29631 ProteinModelPortal:P06593
IntAct:P06593 Gramene:P06593 GO:GO:0017006 Uniprot:P06593
Length = 1129
Score = 2780 (983.7 bits), Expect = 1.9e-289, P = 1.9e-289
Identities = 539/954 (56%), Positives = 687/954 (72%)
Query: 14 SSSARSKQN--ARVAAQTSIDAKLAEDFDES--DFDYXXXXXXXXXX---XXXXXXXXXA 66
SSS+R++Q+ ARV AQT++DA+L +++ES FDY A
Sbjct: 9 SSSSRNRQSSQARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIA 68
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YLQ +Q+G+LIQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +V
Sbjct: 69 YLQHIQKGKLIQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNV 128
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
R+LF+ GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P +
Sbjct: 129 RSLFSDQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTE 188
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
P TAAGAL+SYKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+H
Sbjct: 189 FPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDH 248
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEV +E +P LEPYLG HYPATDIPQA+R L MKNKVRMICDC A +KVI+ + L
Sbjct: 249 GEVFSEITKPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFD 308
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDNDQ----EQGRKLWGL 360
+SLCGS LRAPH CH +YMENM SIASLVM+V +NE E DE +++Q ++ +KLWGL
Sbjct: 309 ISLCGSALRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGL 368
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD- 419
+VCHH SPR+VPFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+
Sbjct: 369 LVCHHESPRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREA 428
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
SP+ IV+ TPN+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLST
Sbjct: 429 SPLTIVSGTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLST 488
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +AGYPGA ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+
Sbjct: 489 DSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRR 548
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPR SFKAFLEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +
Sbjct: 549 MHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLK 608
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDL 659
++ + EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ L
Sbjct: 609 LDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTL 668
Query: 660 VAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 717
V SV VV+ ML A EE+ V +++ GP+ GPVILVVNAC ++D ++V+GV
Sbjct: 669 VEDSSVPVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGV 728
Query: 718 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 777
CFV QD+T KLVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G
Sbjct: 729 CFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGW 788
Query: 778 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 837
R+E +++ML+GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY
Sbjct: 789 NRDEVLDKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKY 848
Query: 838 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 897
+E LLSAN++ N G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I
Sbjct: 849 IECLLSANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAIN 908
Query: 898 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDC 951
PL+G+ + + + +DL+EEQ + + C Q+ I+ D D +SI E C
Sbjct: 909 NPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSC 962
>TAIR|locus:2005535 [details] [associations]
symbol:PHYD "phytochrome D" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009883 "red
or far-red light photoreceptor activity" evidence=IGI] [GO:0010017
"red or far-red light signaling pathway" evidence=IGI;RCA]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160 EMBL:Z97340
EMBL:AL161543 GO:GO:0008020 GO:GO:0009883 GO:GO:0017006
HOGENOM:HOG000272703 ProtClustDB:CLSN2679275 EMBL:X76609
IPI:IPI00538270 PIR:B71429 RefSeq:NP_193360.1 UniGene:At.33095
ProteinModelPortal:P42497 SMR:P42497 IntAct:P42497 STRING:P42497
PaxDb:P42497 PRIDE:P42497 EnsemblPlants:AT4G16250.1 GeneID:827319
KEGG:ath:AT4G16250 TAIR:At4g16250 InParanoid:P42497 KO:K12122
OMA:INDIVEW PhylomeDB:P42497 ArrayExpress:P42497
Genevestigator:P42497 GermOnline:AT4G16250 Uniprot:P42497
Length = 1164
Score = 2698 (954.8 bits), Expect = 9.3e-281, P = 9.3e-281
Identities = 534/960 (55%), Positives = 680/960 (70%)
Query: 4 KSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYXXXXXXXXXXXX 58
+S N+ + S A Q ++DA+L F++S FDY
Sbjct: 40 RSQNQQPQNHGGGTESTNKA--IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSS 97
Query: 59 XXXXXXXAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ- 117
AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+IE +
Sbjct: 98 VPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKS 157
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G D+R+LF SS L++A E+ LLNPI IH +GKPFYAILHR+DVG++I
Sbjct: 158 EVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILI 217
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLPSG+I LLCD +V V DLTGYDRVM
Sbjct: 218 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVM 277
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 278 VYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRV 337
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-- 355
+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ + GR
Sbjct: 338 VQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNS 397
Query: 356 -KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCD
Sbjct: 398 MRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCD 457
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGVTPT+ QI DI EWL+ H S
Sbjct: 458 MLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDS 517
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH K
Sbjct: 518 TGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDK 577
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN-- 592
D G++M+PRSSF+ FLEVVK R PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 578 DDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGA 637
Query: 593 -VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P DD +++ + E+ + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V+
Sbjct: 638 VQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVED 697
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCT 707
A+G +LV +L+ + + V +LS A E +NVE+KL+ FG + +VVNAC +
Sbjct: 698 AMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSS 757
Query: 708 QDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEW 767
+D N++GVCFVGQD+TG K+VMDK+ IQGDY I+ SP+ LIPPIF DE+ CLEW
Sbjct: 758 KDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEW 817
Query: 768 NDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKIL 827
N MEKL+G R E I ++L+ EVF ++ CR+K D LTK IV++ I GQD DK
Sbjct: 818 NTAMEKLTGWPRSEVIGKLLVREVFG--SY-CRLKGPDALTKFMIVLHNAIGGQDTDKFP 874
Query: 828 FGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLN 887
F FFD++G++++ALL+ NKR + +GKI G CFL + SPELQ AL+VQR E +
Sbjct: 875 FPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRK 934
Query: 888 KLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
+L YI + I+ PL+G+ F +L+ DL+E+QKQLL+TSV C++Q++ IV D D++SI++
Sbjct: 935 ELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDD 994
>TAIR|locus:2005536 [details] [associations]
symbol:PHYE "phytochrome E" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 EMBL:AL110123 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
EMBL:AL161548 UniGene:At.32943 UniGene:At.70995 GO:GO:0008020
GO:GO:0017006 HOGENOM:HOG000272703 EMBL:X76610 EMBL:AK221424
IPI:IPI00524548 PIR:S46313 RefSeq:NP_193547.4
ProteinModelPortal:P42498 SMR:P42498 IntAct:P42498 STRING:P42498
PaxDb:P42498 PRIDE:P42498 EnsemblPlants:AT4G18130.1 GeneID:827538
KEGG:ath:AT4G18130 TAIR:At4g18130 InParanoid:P42498 KO:K12123
OMA:LCLVNST Genevestigator:P42498 GermOnline:AT4G18130
Uniprot:P42498
Length = 1112
Score = 2468 (873.8 bits), Expect = 2.2e-256, P = 2.2e-256
Identities = 500/956 (52%), Positives = 663/956 (69%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDF---DYXXXXXXXXXXXXXXXXXX 64
+++ S +S+ + + AQ S+DA L DF +S + +
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHI 63
Query: 65 XAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ---DALT 121
AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+ D +
Sbjct: 64 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDKVK 121
Query: 122 --LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+DL
Sbjct: 122 GLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY
Sbjct: 182 EPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q
Sbjct: 242 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + +D KLWG
Sbjct: 302 SEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVV-KGKDS--------SKLWG 352
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD
Sbjct: 353 LVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRD 412
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG-STGLS 478
+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STGL+
Sbjct: 413 TVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLT 472
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TDSLV+AGYPGA++LGDAVCG+AA +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 473 TDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAG 532
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V
Sbjct: 533 RMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTS-----SRPVLSGNGV-- 585
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
+EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L D
Sbjct: 586 -ARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLAD 644
Query: 659 -LVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPR---ETSGPVILVVNACCTQDTKE 712
+V +S ++++L A EE++V +KLR FG + S V ++VN+C ++D E
Sbjct: 645 EIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTE 704
Query: 713 NVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGME 772
N+IGVCFVGQDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN ME
Sbjct: 705 NIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAME 764
Query: 773 KLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA-DKILFGFF 831
KL+G + E I +ML GEVF V F C+VK D+LTK I + + I+G + + L FF
Sbjct: 765 KLTGWSKHEVIGKMLPGEVFGV--F-CKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFF 821
Query: 832 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 891
+++GKY+EA L+ANK TN EGK+ I CF + + L + E +A SLN+L Y
Sbjct: 822 NKEGKYIEASLTANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLNELTY 877
Query: 892 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
+R+EI+ PLNGI F L+ +S++S Q+Q L+TS C++Q+T I++ TD++SIEE
Sbjct: 878 VRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEE 933
>UNIPROTKB|Q55168 [details] [associations]
symbol:cph1 "Phytochrome-like protein cph1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009585 "red, far-red light
phototransduction" evidence=IDA] [GO:0009639 "response to red or
far red light" evidence=IDA] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IDA] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA] InterPro:IPR003018
InterPro:IPR000014 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065
SMART:SM00091 SMART:SM00387 SMART:SM00388 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0046777
GO:GO:0023014 GO:GO:0018298 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0004673 GO:GO:0000160 EMBL:BA000022 GenomeReviews:BA000022_GR
BRENDA:2.7.13.3 GO:GO:0008020 GO:GO:0009883 PIR:S74389
RefSeq:NP_442237.1 RefSeq:YP_005652297.1 PDB:2VEA PDB:3ZQ5
PDBsum:2VEA PDBsum:3ZQ5 ProteinModelPortal:Q55168 IntAct:Q55168
STRING:Q55168 GeneID:12253516 GeneID:952560 KEGG:syn:slr0473
KEGG:syy:SYNGTS_2344 PATRIC:23842112 eggNOG:COG4251
HOGENOM:HOG000030537 KO:K11354 OMA:PESDIPQ ProtClustDB:CLSK893476
EvolutionaryTrace:Q55168 Uniprot:Q55168
Length = 748
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 191/643 (29%), Positives = 316/643 (49%)
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+ LIQP G ++ + E + T+ S N +L +P E TLG +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSP------EDLLGRTLG----EVF 69
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFY---AILHRIDVGLVI-DLEPV-NPD 185
S +Q G+++ LNP + + G F + HR GL++ +LEP D
Sbjct: 70 DSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD 129
Query: 186 DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDE 245
++P L Y +A A++RL+ N+ DV+V EV +TG+DRVM+Y+F E+
Sbjct: 130 NLPF-----LGFYHMANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENN 182
Query: 246 HGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC--LAPPVKVIQDKKL 303
HG+V+AE +R D+EPYLG HYP +DIPQ +R L + N +R+I D +A P+ +
Sbjct: 183 HGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPST 242
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
++ + L S LR+ + CH Y++NMG ASL +S+ + G LWGL+ C
Sbjct: 243 NRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLI------------KDGH-LWGLIAC 289
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR--DSP 421
HH +P+ +PF LR ACEF +V ++ + + + + VL D + D
Sbjct: 290 HHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFV 349
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
G+ ++ L GAA+ + KL L+G TP E+ ++ + +WL E T S
Sbjct: 350 EGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWL-ENREVQDVFFTSS 408
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG-AKH--DSGGKDGGR 538
L + YP A+ G+ A+ I +FL WFR + + WGG H ++ +DG
Sbjct: 409 LSQI-YPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKI 467
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
++HPR SF + E+V+ +SLPW+ VE+ + +L+ + + + E +++ N+ +
Sbjct: 468 ELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLARNLERSNA 527
Query: 599 RIEKI-----DELRIITNEM---VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++K +L+ N++ V+L+E L DA ++ + L +D
Sbjct: 528 DLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFID-FAVTGVSLMQTLIDD 586
Query: 651 AIGTALVD-----LVAGDSVDVVKNMLSSAF--LEERNVEIKL 686
+ A VD L D +VV L++ +EE EI++
Sbjct: 587 ILTYAKVDTQYAQLTFTDVQEVVDKALANLKQRIEESGAEIEV 629
>UNIPROTKB|Q48G81 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0009639 "response to red or far red light"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR003018 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0009639 GO:GO:0005622 GO:GO:0018298
GO:GO:0000156 EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 RefSeq:YP_275602.1 ProteinModelPortal:Q48G81
STRING:Q48G81 GeneID:3556653 KEGG:psp:PSPPH_3446 PATRIC:19976304
OMA:NWLRIIP ProtClustDB:CLSK412238 Uniprot:Q48G81
Length = 745
Score = 446 (162.1 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 130/438 (29%), Positives = 222/438 (50%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRL--QSLPSGNIS 217
+G F A++HR LV++LE + D A A+ SY + R+ Q + ++
Sbjct: 98 NGIEFEALMHRNQGVLVLELEIQDKD------AQAV-SYTERTGNMGRMLRQLHAASDLQ 150
Query: 218 LLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRF 277
L +V V E+ +TGYDRV++Y+F E+ HG+V+AE P +E + G +PA+DIP+ +R
Sbjct: 151 TLYEVSVREIQRMTGYDRVLIYRFEEEGHGQVIAEASAPSMELFNGLFFPASDIPEQARE 210
Query: 278 LIMKNKVRMICDCLAPPVKVIQDKKLD--QPLSLCGSTLRAPHGCHARYMENMGSIASLV 335
L +N +R+I D PV ++ + D Q L L STLR+ H +YM+NMG ++S
Sbjct: 211 LYRRNWLRIIPDADYTPVPLVPQLRPDTQQQLDLSFSTLRSVSPIHCQYMKNMGVLSS-- 268
Query: 336 MSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVN--KE 393
MSV++ QG KLWGL+ C H +P +V LR AC+ + QV +Q++ +
Sbjct: 269 MSVSLI-----------QGGKLWGLISCGHRTPLYVSHELRSACQAIGQVLSLQISAMEA 317
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPV--GIVTQTPNVMDLVKCDGAALYYRGKLWLL 451
+E+S Q RE + + + M + V G+ Q +MDLV G A+ +
Sbjct: 318 LEISRQ-REAKVRALEQLHQAMAESEENVFDGLAQQPQLLMDLVGATGVAIIEDRQTHCY 376
Query: 452 GVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSK--D 509
G P I+ + W++ G ++ L PG A G+ A+ + +
Sbjct: 377 GACPEVSDIRALHTWMIA--GGEPVYASHHLSSVYAPGE-AYQPVASGVLAMNLPKPVDN 433
Query: 510 FLFWFRSHTAKEIKWGGAKH---DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMD 566
+ WFRS + ++W G + + +GG ++ PR+SF+ + + + W ++
Sbjct: 434 GVIWFRSEVKESVQWSGDPNKPLNMESSEGGMRLRPRTSFEIWKVEMTGIAPKWSHGDVF 493
Query: 567 AIHSLQLILRGSLQDEVA 584
A + L+ R +L++++A
Sbjct: 494 AANDLR---RSALENDLA 508
Score = 78 (32.5 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G + ++E N T+L S N +L AP V L G+D L +G A
Sbjct: 27 IQPHGLLFTLEEPNLTILQVSANVQSVLGHAPEHV--------LGKGLD-HVL--GAGWA 75
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD 185
+ ++A+ + + ++ + +G F A++HR LV++LE + D
Sbjct: 76 EVIRSASAHD-SFVDAQRLLMTVNGIEFEALMHRNQGVLVLELEIQDKD 123
>UNIPROTKB|Q4K656 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0009639
"response to red or far red light" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0009639 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0018298 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 OMA:NWLRIIP ProtClustDB:CLSK412238
RefSeq:YP_262277.1 ProteinModelPortal:Q4K656 STRING:Q4K656
GeneID:3479601 KEGG:pfl:PFL_5200 PATRIC:19879863
BioCyc:PFLU220664:GIX8-5240-MONOMER Uniprot:Q4K656
Length = 746
Score = 459 (166.6 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 139/506 (27%), Positives = 247/506 (48%)
Query: 93 VLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNP 152
+L SE + ++ + + Q A LG + L + +++ ++ P
Sbjct: 33 LLTLSEPELRIQQISANVEALLGQPAAQVLGQPLEQLLGDTDGQRIREVLQLPRLSDAPP 92
Query: 153 ILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSY-KLAAKAISRLQSL 211
+ H +G F +LHR L+++LE + + + LK + + + RLQ+
Sbjct: 93 L--HLAVNGARFEGLLHRHQGVLMLELE-IQLEHLQPQH---LKEQTENLGRLLRRLQTA 146
Query: 212 PSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDI 271
+ ++ L + V+E+ +TGYDRV++Y+F E+ HG+V+AE RP +E + G +PA+DI
Sbjct: 147 KT--LNELYAISVSEIQAMTGYDRVLIYRFEEEGHGQVIAEATRPTMEVFNGLFFPASDI 204
Query: 272 PQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD--QPLSLCGSTLRAPHGCHARYMENMG 329
PQ +R L N +R+I + PV ++ + D Q L L +TLR+ H +YM+NMG
Sbjct: 205 PQQARELYRSNWLRIIPNADYQPVPLLPALRPDTQQALDLSFATLRSVSPIHCQYMKNMG 264
Query: 330 SIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ 389
++S MS+++ L DQ LWGL+ C + P VP LR AC+ + QV +Q
Sbjct: 265 VLSS--MSISL------LKGDQ-----LWGLISCGNRQPLLVPHELRIACQTIGQVLSLQ 311
Query: 390 VN--KEVELSAQLREKHILRTQTVLCDMLLRDSPVGI---VTQTPNVM-DLVKCDGAALY 443
++ + +++S Q RE+ + T D +RD+P + + Q P ++ DL + G A+
Sbjct: 312 ISAMEALDISRQ-REEKV--TALASLDQAMRDTPDSVFDGLAQVPQLLLDLTQAGGVAII 368
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
+L G P +++I+ + WL G ++ L YP A + G+ A+
Sbjct: 369 EDKQLHCFGNCPPQDEIRALHRWL--QGTGQAVFASHHLANV-YPPAASYQQVASGVLAM 425
Query: 504 KITSK--DFLFWFRSHTAKEIKWGGAKH---DSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
+ + + WFR + I W G D D G ++ PR+SF+ + + S
Sbjct: 426 TLPKPVDNGVLWFRPEVKENINWSGNPQKPLDLENSDAGLRLRPRTSFEIWKVEMAGIST 485
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVA 584
W + A + L+ R +L+ ++A
Sbjct: 486 KWSHGDRFAANDLR---RSALEHDLA 508
>UNIPROTKB|Q7CY45 [details] [associations]
symbol:Atu1990 "Bacteriophytochrome protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0004673 "protein histidine
kinase activity" evidence=TAS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=TAS] [GO:0019922
"protein-chromophore linkage via peptidyl-cysteine" evidence=IDA]
InterPro:IPR003018 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 SMART:SM00065 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673
GO:GO:0000160 EMBL:AE007869 GenomeReviews:AE007869_GR GO:GO:0008020
GO:GO:0009883 KO:K00936 eggNOG:COG4251 HOGENOM:HOG000030537
RefSeq:NP_354963.2 ProteinModelPortal:Q7CY45 STRING:Q7CY45
GeneID:1134028 KEGG:atu:Atu1990 PATRIC:20813753 OMA:PVHLQYM
GO:GO:0019922 Uniprot:Q7CY45
Length = 736
Score = 452 (164.2 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 132/442 (29%), Positives = 207/442 (46%)
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HR +++++E + G L S AK L S PS +L + VS
Sbjct: 95 HRSGTLVILEVEKAGVGESAEKLMGELTSL---AKY---LNSAPSLEDALFRTAQL--VS 146
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
++G+DR ++Y F D G VVAE L YLG +PA DIP +R L N++RMI
Sbjct: 147 SISGHDRTLIYDFGLDWSGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMIP 206
Query: 289 DCLAPPVKVIQDKKLDQP--LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
D PV + + + L + S LR+ H YM NMG+ AS+ +S+ +N A
Sbjct: 207 DVDYKPVPIRPEVNAETGAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGA--- 263
Query: 347 LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHIL 406
LWGL+ CHH +P V +R AC+F Q+ +++ E R +
Sbjct: 264 ----------LWGLIACHHATPHSVSLAVREACDFAAQLLSMRIAMEQSSQDASRRVELG 313
Query: 407 RTQT-VLCDMLLRDSPV-GIVTQTPNVMDLVK---CDGAALYYRGKLWLLGVTPTEEQIK 461
Q +L M + V G++ DL+K DGAAL L+G TP+ EQ++
Sbjct: 314 HIQARLLKGMAAAEKWVDGLLGGEGEREDLLKQVGADGAALVLGDDYELVGNTPSREQVE 373
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSK--DFLFWFRSHTA 519
++ WL E +TD+L YP A A GI A++++ +L WFR
Sbjct: 374 ELILWLGEREIADV-FATDNLA-GNYPTAAAYASVASGIIAMRVSELHGSWLIWFRPEVI 431
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
K ++WGG H + + G ++HPR SF+ + E ++ S PW + E+ A L+ + G +
Sbjct: 432 KTVRWGGDPHKTVQESG--RIHPRKSFEIWKEQLRNTSFPWSEPELAAARELRGAIIGIV 489
Query: 580 QDEVAEDSKMIVNVPSVDDRIE 601
+ E + + + + +E
Sbjct: 490 LRKTEEMADLTRELQRTNKELE 511
Score = 38 (18.4 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSEN 99
IQ G ++ + + F+V+ S+N
Sbjct: 22 IQEHGALLVLSAREFSVVQASDN 44
>ASPGD|ASPL0000049609 [details] [associations]
symbol:fphA species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0000909 "sporocarp
development involved in sexual reproduction" evidence=IMP]
[GO:0031517 "red light photoreceptor activity" evidence=IDA]
[GO:0010913 "regulation of sterigmatocystin biosynthetic process"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0071491
"cellular response to red light" evidence=IMP;IDA] [GO:1900198
"positive regulation of penicillin biosynthetic process"
evidence=IMP] [GO:0042318 "penicillin biosynthetic process"
evidence=IMP] [GO:1900376 "regulation of secondary metabolite
biosynthetic process" evidence=IMP] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IEA] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR003018 InterPro:IPR001294
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR009082 InterPro:IPR013515 InterPro:IPR013654
InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 SMART:SM00065 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:BN001307
GO:GO:0005622 GO:GO:0023014 EMBL:AACD01000168 GO:GO:0018298
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 RefSeq:XP_682277.1
ProteinModelPortal:G5EB62 EnsemblFungi:CADANIAT00007846
GeneID:2868257 KEGG:ani:AN9008.2 HOGENOM:HOG000171704 OMA:KELTGFH
Uniprot:G5EB62
Length = 1280
Score = 377 (137.8 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 128/451 (28%), Positives = 226/451 (50%)
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
A A++ + + ++ +L + N+ L D V +LTG+ R++VY+F + +G+VV+
Sbjct: 373 AAAMEVFSIVSQIQEQLAR--ADNMEALLDTTSGIVKELTGFHRILVYQFDSEFNGKVVS 430
Query: 252 ECRRP--DLEPYLGFHYPATDIPQASRFLIMKNKVRMICD---CLAPPV-KVIQDKKLDQ 305
E P ++ + G H+PA DIP+ +R L NKVR++ D A V + ++D L+
Sbjct: 431 ELVDPTMSIDLFKGLHFPAADIPKQARDLYRINKVRLLYDRDHVTARLVCRALED--LET 488
Query: 306 PLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHH 365
PL + + LRA H +Y+ NM +S MS++IN D LWGL+ CH
Sbjct: 489 PLDMTHAYLRAMSPIHIKYLANMQIRSS--MSISINSMND-----------LWGLISCHS 535
Query: 366 TSPRF--VPFPLRYACEFLIQVFGVQVNKEVE-LS--AQLREKHILRTQTVLCDMLLRDS 420
PR V FP+R C + G V++ +E LS ++L+ + ++ T V D +
Sbjct: 536 YGPRGMRVSFPIRKMCRLI----GDTVSRNIERLSYASRLQARKLINT--VPTDA----N 585
Query: 421 PVG-IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
P G IV + +++ LV D AL RG++ +L +P +++ + E+L + + ++ L++
Sbjct: 586 PSGYIVASSDDLLRLVDADYGALCIRGEVKILAKSPQSQEMLALLEYL-KVRKYNSVLTS 644
Query: 480 DSLV----EAGYPGALALGDAVCGIAAVKITSK--DFLFWFRSHTAKEIKWGGAKHDSGG 533
+ +V + YP D + G+ V +++ DF+ +FR E+KWGG +++
Sbjct: 645 NHIVKDFQDLNYPPGFK--D-ISGLLYVPLSTDGLDFIVFFRRGQLTEVKWGGNPNEAKF 701
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI----LRGSLQDEVAEDSKM 589
+G + PR SF+ + E V R W + E+D L L+ ++ Q E A +S
Sbjct: 702 TEG--HLEPRKSFQTWRETVLDRCRDWTESEVDTAAVLCLVYGKFIKVWRQQEAALESSS 759
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETA 620
+ + + E L I N + +E A
Sbjct: 760 LTKLLLANSAHEVRTPLNAIVNYLEIALEGA 790
Score = 51 (23.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 77 IQPFGCMIAVDEQ---NFTVLGYSENAPEMLDLAPH 109
IQ FG ++AV E+ V SEN+ ++L +P+
Sbjct: 206 IQSFGALVAVREEPGEQMVVRIVSENSQDILGYSPN 241
Score = 41 (19.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 103 MLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGA--AALQKAANFGEVNLLNPI 153
M +L ++ + T G D T T +G +A Q A +FG + + PI
Sbjct: 1 MSELPSRSISPRDPSPGETPGRDPSTPSTDAGVGYSASQDAPSFGAYDRVYPI 53
>UNIPROTKB|G4MU11 [details] [associations]
symbol:MGG_12377 "Phytochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360
Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00065
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0023014 GO:GO:0018298 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0043581 EMBL:CM001232
GO:GO:0008020 RefSeq:XP_003715418.1 ProteinModelPortal:G4MU11
EnsemblFungi:MGG_12377T0 GeneID:5050971 KEGG:mgr:MGG_12377
Uniprot:G4MU11
Length = 1523
Score = 381 (139.2 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 129/469 (27%), Positives = 226/469 (48%)
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGA++ + + ++ +L + + N+ +LV VS+LTG+ RVM+Y+F + +G VV
Sbjct: 463 AGAMQIFDIMSQVQEQLAT--ADNLEKFLKILVGIVSELTGFHRVMIYQFDSEFNGRVVT 520
Query: 252 E----CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI--QDKKLDQ 305
E + DL Y G H+PA+DIP+ +R L NKVR++ D P +++ + LD+
Sbjct: 521 ELVDTAQTRDL--YKGLHFPASDIPKQARDLYKINKVRLLYDRDQPTARLVCRSTEDLDK 578
Query: 306 PLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHH 365
PL L S LRA H +Y+ NM +S MS++I +A DEL WGL+ CH
Sbjct: 579 PLDLTHSYLRAMSPIHLKYLNNMAVRSS--MSISI-KAFDEL----------WGLIACHS 625
Query: 366 TSPRF--VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
PR V FP+R C + + + + +++L+ + ++ T V D +P G
Sbjct: 626 YGPRGMRVSFPIRKMCRLVGDTASRNIER-LSYASRLQARKLINT--VPTDK----NPSG 678
Query: 424 -IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
IV + +++ L D A+ RG+ +LG + ++I + E+L S S D
Sbjct: 679 YIVASSDDLLKLFDADFGAVSIRGETKILGKPESTQEILVLLEYLRMKKFTSVLTSQDLT 738
Query: 483 VEAGYPGALALG-DAVCGIAAVKIT--SKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
V+ A G + G+ V ++ DF+ +FR +++KW G ++ ++G +
Sbjct: 739 VDFA-DLRYAPGFQMIAGVLYVPLSVGGNDFIVFFRQGQVRQVKWAGNPYEKVVQEGTQH 797
Query: 540 -MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL----QDEVAEDSKMIVNVP 594
+ PR SFK + E V + W + +++ L L+ + Q E A S + +
Sbjct: 798 YLEPRKSFKVWHETVVGKCRDWSEEQVETAAVLCLVYGKFIEVWRQKEAALQSSKLTKLL 857
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
+ E+R N ++ +E A L + N++ +S + L
Sbjct: 858 LANSA----HEVRTPLNAIINYLEIALEGSLDQETRDNLSKSHSASKSL 902
Score = 37 (18.1 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 185 DDVPVTAAGALKSYKLAAKAISR 207
+D P + GAL+S+ A + R
Sbjct: 131 EDTPQSPRGALRSFMDLAGPVRR 153
>UNIPROTKB|Q55434 [details] [associations]
symbol:cph2 "Phytochrome-like protein cph2" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0009585 "red,
far-red light phototransduction" evidence=TAS] [GO:0009883 "red or
far-red light photoreceptor activity" evidence=TAS] [GO:0018298
"protein-chromophore linkage" evidence=TAS] InterPro:IPR003018
InterPro:IPR001054 InterPro:IPR001294 InterPro:IPR013515
InterPro:IPR016132 Pfam:PF00360 Pfam:PF01590 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 SMART:SM00065 Pfam:PF00990
Pfam:PF00563 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0018298 GO:GO:0016849 GO:GO:0009190
InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887
Gene3D:3.20.20.450 InterPro:IPR001633 SMART:SM00052
SUPFAM:SSF141868 PROSITE:PS50883 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0008020 GO:GO:0009883 PIR:S75801
RefSeq:NP_442466.1 RefSeq:YP_005652527.1 ProteinModelPortal:Q55434
DIP:DIP-48801N IntAct:Q55434 STRING:Q55434 GeneID:12253839
GeneID:952361 KEGG:syn:sll0821 KEGG:syy:SYNGTS_2574 PATRIC:23842638
eggNOG:COG2203 KO:K02488 OMA:AIHQGEL ProtClustDB:CLSK2393495
Uniprot:Q55434
Length = 1276
Score = 175 (66.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 66/229 (28%), Positives = 98/229 (42%)
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC-RRPDLEPYLGFHYPATDIPQASRFLIM 280
V+V E G DRV +YKF D GEV+AE R L LG H+P DIP +R +
Sbjct: 30 VIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPPQAREEL- 88
Query: 281 KNKVRMICDCLAPPVKVIQDKK-LDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
N+ +MI +A K + P CH +Y+ MG ++SL + V
Sbjct: 89 GNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYTTVDSCHIQYLLAMGVLSSLTVPVM 148
Query: 340 INEAEDELDNDQEQGRKLWGLVVCHHTSPR-FVPFPLRYAC----EFLIQVFGVQVNKEV 394
Q+Q +LWG++ HH+ PR F E + + Q++++V
Sbjct: 149 -----------QDQ--QLWGIMAVHHSKPRRFTEQEWETMALLSKEVSLAITQSQLSRQV 195
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q++E + R +T + D P V V+ DGA LY
Sbjct: 196 H-QQQVQEALVQRLETTVAQY--GDRPETWQYALETVGQAVEADGAVLY 241
Score = 50 (22.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
R+ + LE +K+ +P ED+E++ SL +
Sbjct: 705 RQFQDEKWLNSVLECLKRTGMPPEDLELEITESLMM 740
Score = 41 (19.5 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 528 KHDSGGKDGGRK-MHPRSSFKAFLEVVKQRSLP-WEDVE--MDAIHSLQLIL 575
KH +G + R+ + PR SF+A+ E Q+ +P W E + + S QL +
Sbjct: 367 KHWAGKRGIDRRNILPRLSFEAWEET--QKLVPTWNRSERKLAQVASTQLYM 416
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 953 934 0.00092 122 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 624 (66 KB)
Total size of DFA: 432 KB (2208 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 75.85u 0.13s 75.98t Elapsed: 00:00:04
Total cpu time: 75.85u 0.13s 75.98t Elapsed: 00:00:04
Start: Sat May 11 02:09:52 2013 End: Sat May 11 02:09:56 2013