BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002210
(953 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q10CQ8|PHYC_ORYSJ Phytochrome C OS=Oryza sativa subsp. japonica GN=PHYC PE=2 SV=1
Length = 1137
Score = 1432 bits (3707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/961 (70%), Positives = 812/961 (84%), Gaps = 14/961 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTIN + D + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA---EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQ 708
AIG LVDLV DSV+VVK +L+SA +EE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 709 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 768
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 769 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 828
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 829 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 888
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 889 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEW 948
L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ DTD+ESIE+
Sbjct: 902 LTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQC 961
Query: 949 Y 949
Y
Sbjct: 962 Y 962
>sp|A2XM23|PHYC_ORYSI Phytochrome C OS=Oryza sativa subsp. indica GN=PHYC PE=2 SV=2
Length = 1137
Score = 1428 bits (3696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/961 (70%), Positives = 811/961 (84%), Gaps = 14/961 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTIN + D + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD V G+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA---EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQ 708
AIG LVDLV DSV+VVK +L+SA +EE+N++IKL+ F +E +GPVIL+VNACC++
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSR 721
Query: 709 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 768
D E V+GVCFV QD+TGQ ++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 722 DLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 781
Query: 769 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 828
+ M+K++G+KRE+A++++LIGEVFT +GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 782 EAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLF 841
Query: 829 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 888
GFF+ GKY+E+L++A KRT+AEGKI+G LCFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 842 GFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKE 901
Query: 889 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEW 948
L YIR+E+R PLNG+ F +NL+ SDL+EEQ++LL ++VLCQEQL I+ DTD+ESIE+
Sbjct: 902 LTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQC 961
Query: 949 Y 949
Y
Sbjct: 962 Y 962
>sp|P93528|PHYC_SORBI Phytochrome C OS=Sorghum bicolor GN=PHYC PE=2 SV=1
Length = 1135
Score = 1370 bits (3547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/961 (70%), Positives = 804/961 (83%), Gaps = 13/961 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+L D
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDG ALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQ 708
AIG L+DLV DS++VVK +L SA +EE+N+EIKL+AF +E +GP+IL+VN+CC++
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSR 719
Query: 709 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 768
D E VIGVCFVGQD+T QK++MDKYTRIQGDYV IV +PS LIPPIFM ++ G CLEWN
Sbjct: 720 DLSEKVIGVCFVGQDLTTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWN 779
Query: 769 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 828
M+K++G++RE+ I+++LIGEVFT+ ++GCRVK+H TLTKL I+MN VISGQD +K+LF
Sbjct: 780 KAMQKITGIQREDVIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLF 839
Query: 829 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 888
GFFD GKY+E+LL+ NKR NAEGKI+G +CFLHVASPELQ+ALQVQ++SEQAA NS +
Sbjct: 840 GFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKE 899
Query: 889 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEW 948
L YI +E+R PLNG+ F NL+ S+L+EEQ++LL +++LCQ+QL I+ DTD+ESIE+
Sbjct: 900 LTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQC 959
Query: 949 Y 949
Y
Sbjct: 960 Y 960
>sp|P14714|PHYC_ARATH Phytochrome C OS=Arabidopsis thaliana GN=PHYC PE=1 SV=1
Length = 1111
Score = 1353 bits (3502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/954 (65%), Positives = 795/954 (83%), Gaps = 15/954 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 721
SV+ VKNML+ A EER EI++RAFGP+ S PV LVVN CC++D NV+GVCF+G
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 722 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 781
QD+TGQK + + Y+R++GDY I+ SPS LIPPIF+T+E+G C EWN+ M+KLSG+KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 782 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ-DADKILFGFFDQQGKYVEA 840
+ ++L+GEVFT ++GC +K+HDTLTKLRI N VISGQ + +K+LFGF+ + G ++EA
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 841 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 900
LLSANKRT+ EGK++G+LCFL V SPELQYALQVQ+ISE A A +LNKL Y+R E++ P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 901 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY---DC 951
I+F+Q+L+ +S LSE+QK+LL+TSVLC+EQL ++ D+DIE IEE Y DC
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDC 952
>sp|Q40762|PHY_PICAB Phytochrome OS=Picea abies PE=2 SV=1
Length = 1136
Score = 1312 bits (3395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/949 (67%), Positives = 760/949 (80%), Gaps = 19/949 (2%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
K +ARV QT +DAKL +F+ S FDY+ S++IS +S+VPS TV AYLQR+Q+ LI
Sbjct: 23 KHSARVITQTPVDAKLQAEFEGSVHSFDYTKSIDISGDSSSVPSETVKAYLQRLQKEMLI 82
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDL--APHAVPNIEQQDA---------LTLGIDV 126
QPFGC++AV+E + V+GYSENAPEMLD+ HAVP+I Q L +G+D
Sbjct: 83 QPFGCVLAVEEGSCAVVGYSENAPEMLDVVGGAHAVPSIGGQQQEGGGGGGGLLRIGMDA 142
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RTLF + AAALQKAA F +++L+NPI + C SGKPFYAIL+RID GLVID EPV P D
Sbjct: 143 RTLFKPASAAALQKAATFADMHLVNPIFVRCNRSGKPFYAILNRIDAGLVIDFEPVMPSD 202
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VPV+AAGAL+SYKLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM Y+FHEDEH
Sbjct: 203 VPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLCDTVVQEVRELTGYDRVMAYRFHEDEH 262
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVVAE RRPDLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV VIQDK+L QP
Sbjct: 263 GEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAPPVNVIQDKRLRQP 322
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----RKLWGLVV 362
LSLCGSTLRAPHGCHA+YM NMGSIASLVMSVT NE D+ + +Q RKLWGLVV
Sbjct: 323 LSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTTNENGDDSEGGGQQQPQNRRKLWGLVV 382
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR +PFPLRYACEFL+QVFG+Q+NKEVEL+AQLREKHILR Q VLCDMLLRD+PV
Sbjct: 383 CHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVELAAQLREKHILRVQPVLCDMLLRDAPV 442
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+QTPN+MDLVKCDGAAL Y +LWLLG TPTE QI DIA+WLLE+HR STGLSTDSL
Sbjct: 443 GIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPTEAQILDIADWLLEHHRDSTGLSTDSL 502
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
EAGYPGA +LGDAVCGIAA +ITSKDFLFWFRSHTAKEI WGGAKHD KD GR+MHP
Sbjct: 503 AEAGYPGAASLGDAVCGIAAARITSKDFLFWFRSHTAKEIIWGGAKHDPNDKDDGRRMHP 562
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILR S D DSK +++ D R++
Sbjct: 563 RSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRDSFHDIDDSDSKTMIHARLNDLRLQG 622
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
IDEL +TNEMVRLIETA VPILA+D++G VNGWN+KAAELTGL D+ IG L+DLV
Sbjct: 623 IDELSAVTNEMVRLIETATVPILAIDSNGLVNGWNTKAAELTGLLADEVIGRPLIDLVQH 682
Query: 663 DSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 720
DSV++VK ML A EE+NVEIKL+ FG +E GPV+L+VNAC ++D +ENV+GVCFV
Sbjct: 683 DSVEIVKKMLYLALQGEEEQNVEIKLKTFGIQEEKGPVVLIVNACSSRDLEENVVGVCFV 742
Query: 721 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 780
QD+T Q++ MDK+T +QGDY IV +P+ LIPPIF DE G C EWN MEKL+G KRE
Sbjct: 743 AQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLIPPIFGADEYGYCSEWNPAMEKLTGWKRE 802
Query: 781 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 840
E I +ML+GEVF + C++K D LTKLRIV+N ++G++ +K F FFD+ GK EA
Sbjct: 803 EVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRIVLNNAMAGKETEKFPFSFFDRHGKNTEA 862
Query: 841 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 900
LLSANKRT+AEG I+G+ CFLHV S ELQ ALQVQR++EQAA + L +L YIR+EIR PL
Sbjct: 863 LLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAAMDRLKELAYIRQEIRNPL 922
Query: 901 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
GI F + LM ++DLSEEQKQ+++TS LCQ QL ++DD D+ESIE+ Y
Sbjct: 923 YGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADLESIEDGY 971
>sp|Q39557|PHY2_CERPU Phytochrome 2 OS=Ceratodon purpureus GN=PHY2 PE=3 SV=1
Length = 1121
Score = 1268 bits (3282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/953 (63%), Positives = 746/953 (78%), Gaps = 11/953 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
E V +DV V+AAGAL+S+KLAAKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y
Sbjct: 179 EAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAY 238
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VR+I DC A PVK+IQ
Sbjct: 239 KFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQ 298
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E++ ++GRKLWG
Sbjct: 299 DPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWG 358
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD
Sbjct: 359 LVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRD 418
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIV+QTPN+MDLVKCDGAALYY + WLLG TPTE QIKDIAEWLLEYH+ STGLST
Sbjct: 419 APIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLST 478
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD KD GRK
Sbjct: 479 DSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRK 538
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++ D +
Sbjct: 539 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLK 598
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
+ +DEL ++ NEMVRLIETA PILAVD++G +NGWN+K A +TGL V +A+G +LV D
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 659 LVAGDSVDVVKNM--LSSAFLEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 716
LV +SV VV+ + L+S EE+NVEIKL+ FG + VIL+VNAC ++D ++V+G
Sbjct: 659 LVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVG 718
Query: 717 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 776
VCFVGQD+TGQK+ MDK+TRIQGDY IV +P LIPPIF DE G C EWN ME L+G
Sbjct: 719 VCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTG 778
Query: 777 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 836
K +E + ++L+GE+F ++ CR+K+ D++TK I +N + G + DK F F +++GK
Sbjct: 779 WKHDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGK 838
Query: 837 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 896
+VEALLS NKRTNA+G I+G+ CFL +AS ELQ AL VQR +E+ A L +L YIR+EI
Sbjct: 839 FVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEI 898
Query: 897 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
+ PL GI F + L+ +DLS++QKQ L TS +C++QL +++D D+ESIE+ Y
Sbjct: 899 KNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGY 951
>sp|Q01549|PHY1_SELMA Phytochrome 1 OS=Selaginella martensii GN=PHY1 PE=3 SV=1
Length = 1134
Score = 1266 bits (3275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/961 (63%), Positives = 756/961 (78%), Gaps = 19/961 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDYS S+N + ST
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYSKSINATKSTGET 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGSGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD LT+G D RTLFT++ +A + A ++++LNPI + KTS KPFYAI+HRIDVGLV
Sbjct: 121 QDVLTIGTDARTLFTAAASALEKAAGAV-DLSMLNPIWVQSKTSAKPFYAIVHRIDVGLV 179
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV D+TGYD
Sbjct: 180 MDLEPVKASDTRVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVTGYDL 239
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV
Sbjct: 240 VMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAPPV 299
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED----ELDNDQ 351
K+ QDK+L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM++ IN+ ++ Q
Sbjct: 300 KITQDKELRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGGGGGQ 359
Query: 352 EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
+GR+LWGLVVCHHTSPR VPF LR ACEFL+QVFG+Q+N E ++A +REKHILRTQT+
Sbjct: 360 HKGRRLWGLVVCHHTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILRTQTL 418
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E QIKDIAEWLLE+H
Sbjct: 419 LCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWLLEHH 478
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD
Sbjct: 479 KDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDP 538
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K ++
Sbjct: 539 DDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMI 598
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K A++TGL V +A
Sbjct: 599 HARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEA 658
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQ 708
+G +L +LV +S D+V+ +L A EE+NVE+KL+ FG ++ VILVVNAC ++
Sbjct: 659 MGRSLAKELVLHESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVVNACASR 718
Query: 709 DTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWN 768
D +NV+GVCFVGQD+TGQK+VMDK+TRIQGDY IV +P+ LIPPIF DE G C EWN
Sbjct: 719 DVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWN 778
Query: 769 DGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILF 828
MEKLSG +REE + +ML+GE+F ++ CR+K D +TK IV+N GQD +K F
Sbjct: 779 PAMEKLSGWRREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPF 838
Query: 829 GFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNK 888
FFD+QGKYVEALL+A KR +AEG I+G+ CFLH+AS ELQ AL VQR +E+ A + L +
Sbjct: 839 AFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKE 898
Query: 889 LEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEW 948
L YIR+EI+ PL GI F + LM T+DLSE+QKQ ++T +C++Q+ I+DD D+ESIE+
Sbjct: 899 LAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 958
Query: 949 Y 949
Y
Sbjct: 959 Y 959
>sp|P36505|PHY1_PHYPA Phytochrome 1 OS=Physcomitrella patens subsp. patens GN=PHY1 PE=2
SV=1
Length = 1132
Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/931 (63%), Positives = 725/931 (77%), Gaps = 9/931 (0%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP GNI LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVE +AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIADSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFL--E 678
PILAVD++G +NGWN+K A++TGL V +A G +LV DLV +SV VV+ +L A E
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALRGEE 682
Query: 679 ERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQ 738
E+NVEIKL+ FG + G VIL+V+AC + ENV+GVCFVGQD+TGQK+ MDK+TRIQ
Sbjct: 683 EQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFTRIQ 742
Query: 739 GDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFG 798
GDY IV +P LIPPIF DE G C EWN ME L+G K++E + ++L+GE+F ++
Sbjct: 743 GDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMC 802
Query: 799 CRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISGIL 858
CR+K+ D +TK I +N + GQ DK F FFD++GKYV+ LLS NKRTNA+G I+G+
Sbjct: 803 CRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVF 862
Query: 859 CFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEE 918
CFL +AS ELQ AL+VQR +E+ A L +L YI REI+ PL G+ F + L+ +DLS++
Sbjct: 863 CFLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTFTRQLLEDTDLSDD 922
Query: 919 QKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
Q+Q L TS +C++QL ++D D+ESIE+ Y
Sbjct: 923 QQQFLDTSAVCEQQLQKSLNDMDLESIEDGY 953
>sp|P93673|PHYA_LATSA Phytochrome type A OS=Lathyrus sativus GN=PHYA PE=3 SV=1
Length = 1124
Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/958 (60%), Positives = 736/958 (76%), Gaps = 13/958 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES FDYS+ V +S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSWVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE QI++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL++AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 711
L+ LV S D+VK ML+ A EE+NV+ +++ G + GP+ L+VNAC ++D +
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNACASRDLR 721
Query: 712 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 771
ENV+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M
Sbjct: 722 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 781
Query: 772 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 831
KL+G KREE +++ML+GEVF + CR+KN + IV+NK ++G + +K+ FGFF
Sbjct: 782 IKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVAFGFF 841
Query: 832 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 891
++GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y
Sbjct: 842 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 901
Query: 892 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
++R+IR PL GI F ++ +DL EQKQ++ TS CQ QL+ I+DD+D++ I + Y
Sbjct: 902 MKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDGIIDGY 959
>sp|P33530|PHYA1_TOBAC Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1
Length = 1124
Score = 1208 bits (3125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/946 (60%), Positives = 728/946 (76%), Gaps = 13/946 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQR 70
ARSK +AR+ AQT+IDAKL DF+ES FDYS+SV ++S + P S +AYL +
Sbjct: 14 ARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQ 73
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+ IQPFGC++A+DE+ F V+ +SENAPEML + HAVP++ + AL +G D+RT+F
Sbjct: 74 IQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIF 133
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T AAALQKA FGEV+LLNP+L+HCKTSGKP+YAI+HR+ L+ID EPV P +VP+T
Sbjct: 134 TGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMT 193
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLAAKAI+RLQ+LPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV
Sbjct: 194 AAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVV 253
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P L+PYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LC
Sbjct: 254 AEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLC 313
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHT 366
GSTLRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T
Sbjct: 314 GSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNT 373
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+R +P+GIV+
Sbjct: 374 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVS 433
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+ LG+TP++ Q+ DI WL EYH STGLSTDSL +AG
Sbjct: 434 QSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAG 493
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGALALGD VCG+AAV+I+ K +LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSF
Sbjct: 494 FPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 553
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM-IVNVPSVDDRIEKIDE 605
KAFLEVVK RS+PW+D EMDAIHSLQLILR + +D A DS I++ D +I+ + E
Sbjct: 554 KAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQE 613
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSV 665
L +T EMVRLIETA+VPI AVD G +NGWN+K AELTGL VD+AIG L+ LV SV
Sbjct: 614 LEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSV 673
Query: 666 DVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQD 723
D V ML A EERNVE +++ GP S P+ L+VNAC ++D ++V+GVCF+ QD
Sbjct: 674 DTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQD 733
Query: 724 ITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAI 783
ITGQK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M KL+G +R++ I
Sbjct: 734 ITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVI 793
Query: 784 ERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLS 843
++ML+GEVF + CR+KN + +V+N ++GQ+ KI FGFF + GKYVE LL
Sbjct: 794 DKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLC 853
Query: 844 ANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGI 903
+KR + EG ++G+ CFL +AS ELQ AL +QR+SEQ A L L YIRR+IR PL+GI
Sbjct: 854 VSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGI 913
Query: 904 AFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
F + ++ ++L EEQK +L+TS CQ QL I+DDTD++SI + Y
Sbjct: 914 IFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGY 959
>sp|P15001|PHYA_PEA Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1
Length = 1124
Score = 1201 bits (3108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/958 (59%), Positives = 733/958 (76%), Gaps = 13/958 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES + S ++ S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE Q+++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGDQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTK 711
L+ LV S D+VK ML+ A EE+NV+ +++ G + SGP+ L+VNAC ++D +
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNACASKDLR 721
Query: 712 ENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGM 771
ENV+GVCFV QDIT QK VMDK+TRI+GDY IV +P+ LIPPIF TDE G C EWN M
Sbjct: 722 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 781
Query: 772 EKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFF 831
KL+G KREE +++ML+GEVF + CR+KN + IV+NK ++G + +K+ FGFF
Sbjct: 782 IKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFF 841
Query: 832 DQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEY 891
++GKYVE LLS +K+ +AEG ++G+ CFL +ASPELQ AL +QR+SEQ A L L Y
Sbjct: 842 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 901
Query: 892 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
++R+IR PL GI F ++ +DL EQK+++ TS CQ QL+ I+DD+D++ I + Y
Sbjct: 902 MKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGIIDGY 959
>sp|P30733|PHYA_SOLTU Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2
Length = 1123
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/943 (59%), Positives = 717/943 (76%), Gaps = 13/943 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNIS--SSTSNVPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++ + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFGC++A+DE+ V+ +SENAPEML + HAVP++ + L +GID+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVV H+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
F PFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDL+KCDGAAL Y+ K+ LG+ P++ Q+ DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSFK F
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMD IHSLQLILR + +D A +S I ++ D +I+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EMVRLIETA+VPI AVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITG 726
ML A EERNVE +++ GP S P+ L+VNAC ++D +++V+GVCF+ QDITG
Sbjct: 677 NKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITG 736
Query: 727 QKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERM 786
QK +MDK+TRI+GDY I+ +P LIPPIF TD+ G C EWN M L+G +R++ +++M
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMDKM 796
Query: 787 LIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANK 846
L+GEVF + CR+KN + +++N I+GQ+++KI FGFF + GKYVE LL +K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVSK 856
Query: 847 RTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFM 906
R + EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L YIRR+IR PL+GI F
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFS 916
Query: 907 QNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
+ ++ + L EEQK +L TS CQ QL I+DDTD++SI E Y
Sbjct: 917 RKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGY 959
>sp|P14712|PHYA_ARATH Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2
Length = 1122
Score = 1196 bits (3093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/957 (59%), Positives = 730/957 (76%), Gaps = 14/957 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQDT 710
G + LV SV++VK ML +A EE+NV+ +++ R +GP+ LVVNAC ++D
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 721
Query: 711 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 770
ENV+GVCFV D+TGQK VMDK+TRI+GDY I+ +P+ LIPPIF TDE G C EWN
Sbjct: 722 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 781
Query: 771 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGF 830
M KL+GLKREE I++ML+GEVF + CR+KN + L IV+N ++ QD +K+ F F
Sbjct: 782 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 841
Query: 831 FDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLE 890
F + GKYVE LL +K+ + EG ++G+ CFL +AS ELQ AL VQR++E+ A L L
Sbjct: 842 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 901
Query: 891 YIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
YI+R+IR PL+GI F + ++ ++L EQ+++L+TS LCQ+QL+ I+DD+D+ESI E
Sbjct: 902 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIE 958
>sp|O49934|PHYA_POPTM Phytochrome A OS=Populus tremuloides GN=PHYA PE=2 SV=1
Length = 1125
Score = 1194 bits (3089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/940 (60%), Positives = 722/940 (76%), Gaps = 13/940 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKL 729
L A EE+N++ +++ G + GP+ LVVNAC ++D ENV+GVCFVGQDITGQK+
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 730 VMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIG 789
VMDK+TRI+GDY IV + + LIPPIF TDE G C EWN M L+G KREE +++ML+G
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 790 EVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTN 849
EVF + CR+KN + L +V+N ++GQ+++K+ FGFF + GKYVE LL +K+ +
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 850 AEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNL 909
EG ++G+ CFL +AS ELQ AL VQR+SEQ A L L Y++++I PL+GI F +
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKM 919
Query: 910 MGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
M ++L EQK+LL TS CQ QL+ I+DD+D++SI E Y
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGY 959
>sp|Q41046|PHY_PINSY Phytochrome OS=Pinus sylvestris PE=2 SV=1
Length = 1131
Score = 1185 bits (3065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/938 (60%), Positives = 721/938 (76%), Gaps = 16/938 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
A AQ + DA+L + F++S FDY+ S+ + + VP ++AYL R+QRG
Sbjct: 30 KATAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRA--VPEQQITAYLSRIQRGGR 87
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLGIDVRTLFTSSG 134
IQPFGC++AV+E F ++ YSEN EMLDL +VP++E QQD LT+G DVRTLFT++
Sbjct: 88 IQPFGCVLAVEETTFRIIAYSENE-EMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFTAAS 146
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+ D ++AAGA
Sbjct: 147 AHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGA 206
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AISRLQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 207 VQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIR 266
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
R DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GST
Sbjct: 267 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTP 326
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
APHGCHA+YM NMGSI SL+M+V IN +DE KLWGLVVCHHTSPR VPFP
Sbjct: 327 SAPHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFP 386
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q G+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DL
Sbjct: 387 LRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDL 446
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LG
Sbjct: 447 VKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLG 506
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVVK
Sbjct: 507 DAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVK 566
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
+RSLPW++VE+DAIHSLQLILR S +D +K +V+ R++ IDEL + +EMV
Sbjct: 567 RRSLPWDNVEIDAIHSLQLILRCSFRDIDDSGTKTMVHSRLNYLRLQGIDELSSVASEMV 626
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV SV+ V+ ML
Sbjct: 627 RLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLH 686
Query: 674 SAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 731
+A EE+NVE+ L+ FGP++ VILVVNAC ++D +N++GVCFVGQD+T QK+VM
Sbjct: 687 NALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVM 746
Query: 732 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 791
DK+ RIQGDY IV SP+ LIPPIF +DE C EWN MEK++G +E I +ML+GE+
Sbjct: 747 DKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEI 806
Query: 792 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 851
F CR+K D +TK IV+++ GQ+ +K F FFD+QGKYVEALL+ANKRT+A+
Sbjct: 807 F---GGCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTANKRTDAD 863
Query: 852 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 911
G+I+G CF +AS ELQ+AL+VQR E+ L +L YIR+EI+ PL G+ F + L+
Sbjct: 864 GRITGSFCFFRIASSELQHALEVQRQQEKKCFARLKELAYIRQEIKNPLYGMMFTRKLLE 923
Query: 912 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
+DLS++QKQ ++TS +C+ Q+ ++DD D+ES+E+ Y
Sbjct: 924 ETDLSDDQKQFVETSAVCERQMQKVMDDMDLESLEDGY 961
>sp|P42496|PHY_ADICA Phytochrome 1 OS=Adiantum capillus-veneris GN=PHY1 PE=2 SV=2
Length = 1118
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/933 (59%), Positives = 711/933 (76%), Gaps = 15/933 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQP 79
R AQTS DAKL ++ES FDYS SV S+ + S V+AYLQR+QRG L+Q
Sbjct: 20 RRIAQTSADAKLYAAYEESSESGSFDYSQSV--SAGKEGISSQLVTAYLQRMQRGGLVQQ 77
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC+IAV+E+ F VL Y NAPEMLD+A AVP + Q L +G DVRTL + + A+AL
Sbjct: 78 FGCLIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALD 137
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
+ +V++ NPI + ++SGKPFYAILHR DVGLVIDLEP+ PDD +T GAL+S+K
Sbjct: 138 RVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GALQSHK 196
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAI+RLQSLP G+I LLCD +V EV +LTG+DRVM YKFHEDEHGEVVAE RR DLE
Sbjct: 197 LAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLE 256
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKN+VRMICDC PPVK+IQDK L QP+SL GS LRAPHG
Sbjct: 257 PYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLRAPHG 316
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NM SI+SLVM+V +N+++D+ QG KLWGLVVCHHTSPR+VPFP+R AC
Sbjct: 317 CHTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIKLWGLVVCHHTSPRYVPFPVRSAC 376
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVF +Q+N EV ++AQ+REKHILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLV CDG
Sbjct: 377 EFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDG 436
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AALYY K WLLG TPTE QI DIA WLL+ H+ STGLSTDSL + GYP A LGDAVCG
Sbjct: 437 AALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCG 496
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA KIT+ DFLFWFRSHTAKE++WGGA+HD +D GR+MHPRSSFKAFLEVVKQ+SLP
Sbjct: 497 LAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLP 556
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIET
Sbjct: 557 WEDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIET 616
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF-- 676
A PILAVD G +NGWN K AELTGL+ + A+G +L +LV +S +V+ +L A
Sbjct: 617 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEG 676
Query: 677 LEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 736
EE+++EI LR + + G VIL+VN CC++D NV+GVCFVGQD+TGQKLV+D++ R
Sbjct: 677 EEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIR 736
Query: 737 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 796
IQGDY IV S + LIPPIF DE G C EWN MEKLS +REE + +ML+GE+F ++
Sbjct: 737 IQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQM 796
Query: 797 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 856
CR++ D +TKL IV+N ++GQ+++K F+D+ G+ VEALL A+KRT+A+G+I+G
Sbjct: 797 VCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITG 856
Query: 857 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 916
+ CFLH ASPEL AL ++R E+ +L Y++ E++KPL G+AF + ++ ++L+
Sbjct: 857 VFCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTVLEGTNLT 912
Query: 917 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
EQ+QL+KT+ C+ QL I++D D+ +IEE Y
Sbjct: 913 IEQRQLIKTNAWCERQLRKILED-DLNNIEEGY 944
>sp|P06592|PHYA_CUCPE Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1
Length = 1124
Score = 1170 bits (3028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/934 (59%), Positives = 710/934 (76%), Gaps = 12/934 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DA + DF+ES FDYS+SV ++S S P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDANVQADFEESGNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+D++ F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P + PVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEGPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG+++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVAKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
L+PYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YMENM SIASLVM+V +NE ++E + Q++ ++LWGLVVCH++SPRFVPFP
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP + Q+ DIA WL EYH STGLSTDSL +AGYPGA+ALG
Sbjct: 441 VKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGAIALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD RKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VV+ ML
Sbjct: 621 VRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDSSVEVVRKMLF 680
Query: 674 SAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 731
A EE+NV+ +++ G G + LVVNAC ++D +ENV+GV FV QDITGQK+VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDITGQKMVM 740
Query: 732 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 791
DK+TR++GDY IV +P+ LIPPIF +DE G C EWN M KL+G REE I++ML+GEV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDKMLLGEV 800
Query: 792 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 851
F V CR+KN + L IV+N + GQD +K FGF + G YVE LL NK + +
Sbjct: 801 FGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVNKILDKD 860
Query: 852 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 911
G ++G CFL + S ELQ AL +QR+ EQ A L L YI+R+I+ PL+GI F + L+
Sbjct: 861 GAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIFSRRLLE 920
Query: 912 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 945
++L EQK+LL+TS LCQ+Q++ ++D++DI+ I
Sbjct: 921 RTELGVEQKELLRTSGLCQKQISKVLDESDIDKI 954
>sp|P34094|PHYB_SOLTU Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2
Length = 1130
Score = 1170 bits (3028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/950 (59%), Positives = 706/950 (74%), Gaps = 20/950 (2%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVP 60
T+ NY S S + AQ + DA+L F++S FDYS SV ++T +VP
Sbjct: 22 TSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKFFDYSQSVK--TTTQSVP 72
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+ + L
Sbjct: 73 ERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEIL 132
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VIDLE
Sbjct: 133 TIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLE 192
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 193 PARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYK 252
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD
Sbjct: 253 FHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQD 312
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E +LWGL
Sbjct: 313 ESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSMRLWGL 372
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 373 VVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 432
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL YH STGLSTD
Sbjct: 433 PPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTD 492
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 493 SLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 552
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A +SK IV+ + +
Sbjct: 553 HPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHAHLGEMEL 612
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVD G +NGWN+K AELTG++V++A+G +LV DL
Sbjct: 613 QGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDL 672
Query: 660 VAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGV 717
V +S + + +L +A E++NVEIKLR FG + V +VVNAC ++D N++GV
Sbjct: 673 VYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNNIVGV 732
Query: 718 CFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGL 777
CFVGQD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN MEKL+G
Sbjct: 733 CFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 792
Query: 778 KREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKY 837
R E + +ML+GE+F CR+K D +TK IV++ I GQD DK F FFD+ GKY
Sbjct: 793 SRGEIVGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKY 849
Query: 838 VEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIR 897
V+ALL+ANKR N EG G CF+ +ASPELQ AL+VQR E+ + + +L YI +EI+
Sbjct: 850 VQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEIK 909
Query: 898 KPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D+E+IE+
Sbjct: 910 SPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDLENIED 959
>sp|P29130|PHYB_TOBAC Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2
Length = 1132
Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/953 (59%), Positives = 707/953 (74%), Gaps = 21/953 (2%)
Query: 3 SKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S T+ NY S S + AQ + DA+L F++S FDYS S+ +++ S
Sbjct: 22 SSGTSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKSFDYSQSIK-TTTQS 73
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+
Sbjct: 74 VVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERP 133
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VI
Sbjct: 134 EILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVI 193
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLP G++ LLCD +V V +LTGYDRVM
Sbjct: 194 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVM 253
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE + PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 254 VYKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRV 313
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E + R L
Sbjct: 314 VQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMR-L 372
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLL
Sbjct: 373 WGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 432
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP GIV Q+P++MDLVKCDGAALY +GK + LGVTPTE QIKDI EWLL YH STGL
Sbjct: 433 RDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGL 492
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G
Sbjct: 493 STDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 552
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSL LILR S +D A +SK +V+ +
Sbjct: 553 QRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDAEASNSKAVVHAQLGE 611
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
++ IDEL + EMVRLIETA PI AVD G +NGWN+K AELT L+V++A+G +LV
Sbjct: 612 MELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLV 671
Query: 658 -DLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 714
DLV +S + + +L +A E++NVEIKLR FGP + V +VVNAC ++D N+
Sbjct: 672 HDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNNI 731
Query: 715 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 774
+GVCFVGQD+TGQK+VMDK+ IQGDY IV SP+ LIPPIF +DE+ C EWN MEKL
Sbjct: 732 VGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKL 791
Query: 775 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 834
+G R E I +ML+GE+F CR+K D +TK IV++ I QD DK F FFD+
Sbjct: 792 TGWSRGEIIGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDRN 848
Query: 835 GKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRR 894
GKYV+ALL+ANKR N EG+I G CF+ +ASPELQ AL+VQR E+ + + +L Y+ +
Sbjct: 849 GKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYLCQ 908
Query: 895 EIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
EI+ PLNGI F +L+ +DL+E QKQ L+TS C+ Q++ I+ D D+E+IE+
Sbjct: 909 EIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDLENIED 961
>sp|Q9ZS62|PHYB1_SOLLC Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1
Length = 1131
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/966 (58%), Positives = 709/966 (73%), Gaps = 25/966 (2%)
Query: 1 MSSKSTNKTNYSRSSSARSKQN-----------ARVAAQTSIDAKLAEDFDES-----DF 44
M+S S K +Y SS +++ + ++ AQ + DA+L F++S F
Sbjct: 1 MASGSRTKHSYHNSSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSF 60
Query: 45 DYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML 104
DYS SV ++T +VP ++AYL ++QRG IQPFGCMIAVDE +F ++ YSENA EML
Sbjct: 61 DYSQSVK--TTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEML 118
Query: 105 DLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPF 164
L P +VP++++ + LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPF
Sbjct: 119 SLTPQSVPSLDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPF 178
Query: 165 YAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
YAILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 179 YAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVV 238
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+V
Sbjct: 239 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRV 298
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMI DC A PV+V QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN +
Sbjct: 299 RMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGND 358
Query: 345 DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
+E +LWGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH
Sbjct: 359 EEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 418
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALYY+ K + LGVTPTE QIKDI
Sbjct: 419 VLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIV 478
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL YH STGLSTDSL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKW
Sbjct: 479 EWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKW 538
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD G++MHPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A
Sbjct: 539 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA 598
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
+SK IV+ + ++ IDEL + EMVRLIETA PI VD +G +NGWN K ELT
Sbjct: 599 SNSKAIVHALG-EMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELT 657
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF--LEERNVEIKLRAFGPRETSGPVILV 701
GL+ ++A G +LV DL+ +S + + +L +A +E +NVEIKLR FG + V LV
Sbjct: 658 GLSAEEAKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKAVFLV 717
Query: 702 VNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDED 761
VNAC ++D +++GV FVGQD+TG+K+VMDK+ IQGDY IV SP+ LIPPIF +DE+
Sbjct: 718 VNACSSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDEN 777
Query: 762 GRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQ 821
C EWN MEKLSG REE + +ML+GE+F CR+K D +TK IV++ I GQ
Sbjct: 778 TSCSEWNTAMEKLSGWSREEIVGKMLVGEIF---GSCCRLKGPDAMTKFMIVLHNAIGGQ 834
Query: 822 DADKILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQA 881
D DK F FFD+ GKYV+ALL+ANKR N EG G CF+ +ASPELQ AL+VQR E+
Sbjct: 835 DTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKK 894
Query: 882 AANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTD 941
+ + +L YI +E++ PLNGI F +L+ ++L+E QKQ L+TS C+ Q++ I+ D D
Sbjct: 895 CYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVD 954
Query: 942 IESIEE 947
+E+IE+
Sbjct: 955 LENIED 960
>sp|P55141|PHYA_PETCR Phytochrome A OS=Petroselinum crispum GN=PHYA PE=2 SV=1
Length = 1129
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/953 (57%), Positives = 708/953 (74%), Gaps = 22/953 (2%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS---TSNVPSSTVS-AYLQR 70
R+ QNARV T++DAK+ DF+ES FDYS+SV ++S+ S++ S+ ++ AYL
Sbjct: 14 GRANQNARVVL-TTLDAKIHADFEESGNSFDYSSSVRVTSAVGENSSIQSNKLTTAYLHH 72
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+LIQP GC++AVDE++F ++ YSENAPEML + HAVP++ + L +G DVRT+F
Sbjct: 73 IQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF 132
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ AAALQKA F ++NLLNPIL+HCKTSGKPFYAI HR+ L+ID EPV P +VP+T
Sbjct: 133 TAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEVPMT 192
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLA+KA++RLQ+LP G++ LCD +V EV +LTGYDRVM YKFH+D+HGEV
Sbjct: 193 AAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVT 252
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P LEPY G HYPATD+PQA+RFL +KNKVRMICDC A V+QD+KL L+LC
Sbjct: 253 AEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELTLC 312
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL---DNDQEQGRKLWGLVVCHHTS 367
GSTLRAPH CH +YMENM SIASLVM+V IN++++ + D + + +KLWGLVVCH+TS
Sbjct: 313 GSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHNTS 372
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + V+KE+EL Q+ EK+ILRTQT+LCD+L+RD+P+GIV+Q
Sbjct: 373 PRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQ 432
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PN+MDLVKCDGAAL Y+ K++ LG TP++ Q++DI WL EYH STGLSTDSL +AGY
Sbjct: 433 SPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGY 492
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGD VCG+A VKITS D LFWFRSH A I+WGGAK + GRKMHPRSSFK
Sbjct: 493 PGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFK 552
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ---------DEVAEDSKMIVNVPSVDD 598
AFLEVVK RS W++ EMDAIHSLQLILR +L DE+ ++ +++ D
Sbjct: 553 AFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTD-VIHTKLNDL 611
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
+IE I EL +T+EMVRLIETA VPI AVDA VNGWN+K AELTGL VDQA+G L+
Sbjct: 612 KIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLLT 671
Query: 659 LVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIG 716
LV SV V +L+ A EE+ + + + +G RE S P+ +VVNAC T+ +NV+G
Sbjct: 672 LVEDSSVGTVVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACATRGLHDNVVG 731
Query: 717 VCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSG 776
VCFV QD+T QK +MDK+TRIQGDY IV +P+ LIPPIF TDE G C EWN M +LSG
Sbjct: 732 VCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELSG 791
Query: 777 LKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGK 836
+RE+ + +ML+GE+F ++ C +K+ + L +V+N ++GQ ++KI F FF GK
Sbjct: 792 WRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKICFSFFATDGK 851
Query: 837 YVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREI 896
YVE LL A+K+ + EG ++GI CFL +AS ELQ AL +QR++EQ A L L Y+RR+
Sbjct: 852 YVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQA 911
Query: 897 RKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
+ PL GI F++ + + EEQ +L +TSV CQ + I+DDTD++SI + Y
Sbjct: 912 KNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDGY 964
>sp|P14713|PHYB_ARATH Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1
Length = 1172
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/962 (58%), Positives = 702/962 (72%), Gaps = 21/962 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 32 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 91
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 92 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 151
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 152 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 211
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 212 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 271
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 272 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 331
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 332 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 391
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 392 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 451
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 452 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 511
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 512 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 571
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 572 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 631
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 632 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 691
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNAC 705
++A+G +LV DL+ ++ V +LS A EE+NVE+KL+ F P V +VVNAC
Sbjct: 692 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 751
Query: 706 CTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCL 765
++D N++GVCFVGQD+T QK+VMDK+ IQGDY IV SP+ LIPPIF DE+ CL
Sbjct: 752 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 811
Query: 766 EWNDGMEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADK 825
EWN MEKL+G R E I +M++GEVF C +K D LTK IV++ I GQD DK
Sbjct: 812 EWNMAMEKLTGWSRSEVIGKMIVGEVF---GSCCMLKGPDALTKFMIVLHNAIGGQDTDK 868
Query: 826 ILFGFFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANS 885
F FFD+ GK+V+ALL+ANKR + EGK+ G CFL + SPELQ AL VQR +
Sbjct: 869 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 928
Query: 886 LNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESI 945
+L YI + I+ PL+G+ F +L+ +DL+E+QKQLL+TSV C++Q++ IV D D+ESI
Sbjct: 929 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 988
Query: 946 EE 947
E+
Sbjct: 989 ED 990
>sp|A2XFW2|PHYB_ORYSI Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2
Length = 1171
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/947 (58%), Positives = 702/947 (74%), Gaps = 28/947 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 720
+S + V +LS A E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 721 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 780
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 781 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 840
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 841 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 900
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 901 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIED 999
>sp|Q10MG9|PHYB_ORYSJ Phytochrome B OS=Oryza sativa subsp. japonica GN=PHYB PE=2 SV=1
Length = 1171
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/947 (58%), Positives = 702/947 (74%), Gaps = 28/947 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ---DALTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFV 720
+S + V +LS A E++NVEIKL+ FGP ++ GP+ ++VNAC ++D +N++GVCFV
Sbjct: 716 ESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFV 775
Query: 721 GQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE 780
GQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 776 GQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 835
Query: 781 EAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEA 840
E + ++L+GEVF CR+K D LTK IV++ I GQD +K F FFD+ GKYV+A
Sbjct: 836 EVVGKLLVGEVF---GNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQA 892
Query: 841 LLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPL 900
LL+AN R+ +G+ G CFL +ASPELQ A ++QR E+ + +L YI +EI+ PL
Sbjct: 893 LLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPL 952
Query: 901 NGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
NGI F +L+ +DL ++Q+Q L+TS C++Q++ IV D ++SIE+
Sbjct: 953 NGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIED 999
>sp|P93527|PHYB_SORBI Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2
Length = 1178
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/948 (58%), Positives = 703/948 (74%), Gaps = 32/948 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCF 719
+S ++V+ +LS A E++NVEIKL+ FG +++G + ++VNAC ++D +N++GVCF
Sbjct: 722 KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCF 781
Query: 720 VGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKR 779
VGQD+TGQK+VMDK+ IQGDY IV +P+ LIPPIF +DE+ C EWN MEKL+G R
Sbjct: 782 VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR 841
Query: 780 EEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVE 839
E + + LIGEVF +F CR+K D LTK +V++ I GQD +K F FFD+ GKYV+
Sbjct: 842 GEVVGKFLIGEVF--GSF-CRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQ 898
Query: 840 ALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKP 899
ALL+AN R+ +GK G CFL +AS E+Q A ++QR E+ + +L YI +EI+ P
Sbjct: 899 ALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNP 958
Query: 900 LNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
L+GI F +L+ +DL+++Q+Q L+T C+EQ++ IV D ++SIE+
Sbjct: 959 LSGIRFTNSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIED 1006
>sp|P93526|PHYA_SORBI Phytochrome a OS=Sorghum bicolor GN=PHYA PE=2 SV=1
Length = 1131
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/943 (56%), Positives = 686/943 (72%), Gaps = 14/943 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 671 MLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 728
ML A EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 729 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 788
LVMDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E I++ML+
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 789 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 848
GEVF N C +K+ D +L I++N ++G++A+ FG FD+ GKY+E LLS N++
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNRKV 861
Query: 849 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 908
NA+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + +
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 909 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDC 951
+ ++ L+EEQ + + + C QL I+ D D ++I + C
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSC 964
>sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1
Length = 1131
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/948 (56%), Positives = 700/948 (73%), Gaps = 29/948 (3%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL RG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYL----RGKMIQPF 78
Query: 81 GCMIAVDEQNFT----VLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
GC++A+DE+N V+ YSEN PEML + HAVP++ AL +G D++TLFT+ +
Sbjct: 79 GCLLAIDEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVS 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
LQKA +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+
Sbjct: 139 GLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+ E +P
Sbjct: 199 SYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRA
Sbjct: 259 CLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK---LWGLVVCHHTSPRFVPF 373
PH CHA+YM NM SIASLV++V +N+ E++ D D Q +K LWGLVVCH+T+PRFVPF
Sbjct: 319 PHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVPF 378
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMD 433
PLRYA EFL QVF V+KE+EL Q+ EK+IL L ML+RD+P+GI +++PN+MD
Sbjct: 379 PLRYAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIMD 438
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
LVKCDGAAL YR K+W LGVTP+E QI++IA WL EYH ST STDSL +AG+P AL+L
Sbjct: 439 LVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALSL 498
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GD VCG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVV
Sbjct: 499 GDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVV 558
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKI 603
K RSLPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++
Sbjct: 559 KARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIERM 618
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
EL +T+E+VRL TA VPILAVD G VNGWN K AELTGL + +A G L+ LV
Sbjct: 619 QELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDS 678
Query: 664 SVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVG 721
S D VK ML+ A L EE+NV+ +++ G + SGP+ LVVN C ++D ++NV+GVCFV
Sbjct: 679 STDRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVCFVA 738
Query: 722 QDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREE 781
DIT QK VMDK+ RI+GDY IV + + LIPPIF TDE G C EWN M KL+G KREE
Sbjct: 739 HDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREE 798
Query: 782 AIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEAL 841
+++ML+GE+F + CR+KN + L +V+NK ++G + +K+ FGFF + GKYVE L
Sbjct: 799 VMDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECL 858
Query: 842 LSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLN 901
LS +K+ + EG ++G+ CFL +ASPELQ AL +QR+SEQ A+ LN L Y++R+IR PL
Sbjct: 859 LSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLC 918
Query: 902 GIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
GI F + ++ +DL EQKQLL+TS CQ+QL+ I+DD+D+++I + Y
Sbjct: 919 GIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGY 966
>sp|P19862|PHYA1_MAIZE Phytochrome A OS=Zea mays GN=PHYA1 PE=3 SV=1
Length = 1131
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/941 (57%), Positives = 683/941 (72%), Gaps = 14/941 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV DLTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTI------NEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V + +E E E Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK+ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D ++ D +++ + EL+ +T+E
Sbjct: 564 VKTKSLPWSDYEMDAIHSLQLILRGTLNDASKPAQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSLVQRML 683
Query: 673 SSAF--LEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 730
A EE+ V +L+ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 731 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 790
MDK+TR++GDY I+ +P+ LIPPIF D+ G C EWN M KL+G R+E +++ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVVDKMLLGE 803
Query: 791 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 850
VF N C +K+ D +L IV+N ++G++A+K FGFFD+ KYVE LLS N++ NA
Sbjct: 804 VFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECLLSVNRKVNA 863
Query: 851 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 910
+G ++G+ CF+HV S +LQ+AL VQ+ SEQ A L Y+R I KPL+G+ + + +
Sbjct: 864 DGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLSGMLYSRETL 923
Query: 911 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDC 951
++ L+EEQ + ++ C QL I+ D D ++I + C
Sbjct: 924 KSTGLNEEQMRQVRVGDNCHRQLNKILADLDQDNITDKSSC 964
>sp|Q10DU0|PHYA_ORYSJ Phytochrome A OS=Oryza sativa subsp. japonica GN=PHYA PE=2 SV=1
Length = 1128
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/941 (57%), Positives = 678/941 (72%), Gaps = 14/941 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTS---NVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +V +LFT GA ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAE--DELDND----QEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E DE+ D Q++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+ SP+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG ++ +V SV VV+ ML
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRML 683
Query: 673 SSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 730
A EE+ V+ +++ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 731 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 790
MDK+TR++GDY I+ +PS LIPPIF DE G C EWN M KL+G R+E I +ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKMLLGE 803
Query: 791 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 850
VF N C VKN D L I++N ++G + +K F FFD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNRKVNA 863
Query: 851 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 910
+G I+G+ CF+ V S ELQ+AL VQ+ S+Q A L Y+R I PL+G+ + + +
Sbjct: 864 DGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYSRKAL 923
Query: 911 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDC 951
+ L+EEQ + + + C QL I+ D D +S+ C
Sbjct: 924 KNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSC 964
>sp|A2XLG5|PHYA_ORYSI Phytochrome A OS=Oryza sativa subsp. indica GN=PHYA PE=2 SV=2
Length = 1128
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/941 (57%), Positives = 678/941 (72%), Gaps = 14/941 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTS---NVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +V +LFT GA ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAE--DELDND----QEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E DE+ D Q++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+ SP+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG ++ +V SV VV+ ML
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRML 683
Query: 673 SSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 730
A EE+ V+ +++ G + GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 684 YLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 743
Query: 731 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 790
MDK+TR++GDY I+ +PS LIPPIF DE G C EWN M KL+G R+E I +ML+GE
Sbjct: 744 MDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKMLLGE 803
Query: 791 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 850
VF N C VKN D L I++N ++G + +K F FFD+ GKY+E LLS N++ NA
Sbjct: 804 VFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNRKVNA 863
Query: 851 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 910
+G I+G+ CF+ V S ELQ+AL VQ+ S+Q A L Y+R I PL+G+ + + +
Sbjct: 864 DGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYSRKAL 923
Query: 911 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDC 951
+ L+EEQ + + + C QL I+ D D +S+ C
Sbjct: 924 KNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSC 964
>sp|P33529|PHY_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY PE=2 SV=2
Length = 1124
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/933 (57%), Positives = 697/933 (74%), Gaps = 15/933 (1%)
Query: 28 QTSIDAKLAEDFD------ESDFDYSTSVNIS-SSTSNVPSSTVSAYLQRVQRGRLIQPF 80
Q S DAKL+ F+ FDY+ SV S + T + + +V+AYLQR+QRG +IQ F
Sbjct: 25 QASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQSF 84
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GCM+AV+ F ++ YSEN EML + P +VP + Q+A+ +G DVR+L + S + ++K
Sbjct: 85 GCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDHQNAIGIGTDVRSLLSPSSVSVVEK 144
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV-PVTAAGALKSYK 199
A +V+++NPI ++ + K F+AILH DVGLVIDLEP++ + +AGA++S+K
Sbjct: 145 AVAANDVSMMNPIAVYSLATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQSHK 204
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAISRLQSLP G+I LCDV+V EV +LTGYDRVM YKFH+DEHGEVVAE RR DLE
Sbjct: 205 LAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLE 264
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQASRFL +KN++RMICDC +P VKV+QD ++ Q +SL GST+R HG
Sbjct: 265 PYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRGVHG 324
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NMGS ASLVMSVTIN+ + +GRKLWGL+VCHH++PR +PFP+R AC
Sbjct: 325 CHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPIRSAC 384
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVFG+Q+N EVEL+AQ REKHILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG
Sbjct: 385 EFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLVKCDG 444
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AAL + G+ WLLG++PT+EQ+KDIA WL+ H +TGLSTDSLV+AGYP A LG VCG
Sbjct: 445 AALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGVDVCG 504
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA +IT DFLFWFR H KE+KW GAK D G ++ G +MHPRSSFKAFLEVVKQRSLP
Sbjct: 505 MAAARITENDFLFWFRGHAQKEVKWAGAK-DGGSEEDGSRMHPRSSFKAFLEVVKQRSLP 563
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++ + IV+ + ++ ++EL + +EMVRLIET
Sbjct: 564 WEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEMVRLIET 623
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF-- 676
A PILAVD +G VNGWN K +ELTGL++ + +G +LV DL S D V+ +L A
Sbjct: 624 ATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLYMALNG 683
Query: 677 LEERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTR 736
EE+NVEI+L+ +G ++ GPVIL+VNAC ++D E V+GVCFV QD+TG+K+V DK+TR
Sbjct: 684 EEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQDKFTR 743
Query: 737 IQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEVFTVKN 796
IQGDY IV S ++LIPPIF +DE G C+EWN ME+LSG+KREEAI +ML E+F
Sbjct: 744 IQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTRELF---G 800
Query: 797 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 856
R+KN D LTK IV+N +S D DK F F+D+ GK VE LL+ +KR N+EG ++G
Sbjct: 801 GILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVVTG 860
Query: 857 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 916
+ CFLH AS ELQ AL VQ+ +E+ A +L YIR+EI+ PL+GI F ++ M + LS
Sbjct: 861 VFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHTVLS 920
Query: 917 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWY 949
E+QKQL++TS C++QL I+ D D+ SIE+ Y
Sbjct: 921 EDQKQLIETSATCEKQLRRILADMDLASIEKGY 953
>sp|P06594|PHYA4_AVESA Phytochrome A type 4 OS=Avena sativa GN=PHYA4 PE=1 SV=3
Length = 1129
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/941 (57%), Positives = 679/941 (72%), Gaps = 14/941 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
V AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LIQ
Sbjct: 22 VLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLIQT 81
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGCM+A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA AL
Sbjct: 82 FGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATALH 141
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 142 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 201
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 202 LAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 261
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRAPH
Sbjct: 262 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAPHS 321
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+VPF
Sbjct: 322 CHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESPRYVPF 381
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VN+E EL QLREK IL+ QT+L DML R+ SP+ IV+ PN+M
Sbjct: 382 PLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSGAPNIM 441
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 442 DLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGASA 501
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD +FWFRSHTA EI+WGGAKHDS D R+MHPR SFKAFLEV
Sbjct: 502 LGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAFLEV 561
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 562 VKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVTSE 621
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 622 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQRML 681
Query: 673 SSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLV 730
A EE+ V +++ GPR GPVILVVNAC ++D ++V+GVCFV QD+T KLV
Sbjct: 682 YLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLV 741
Query: 731 MDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGE 790
MDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G R+E +++ML+GE
Sbjct: 742 MDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLLGE 801
Query: 791 VFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNA 850
VF N C +KN + L +++N ++G++ +K FGFFD+ GKY+E LLSAN++ N
Sbjct: 802 VFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKENE 861
Query: 851 EGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLM 910
G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I PL+G+ + + +
Sbjct: 862 GGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRKAL 921
Query: 911 GTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDC 951
+DL+EEQ + + C Q+ I+ D D +SI E C
Sbjct: 922 KNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISEKSSC 962
>sp|P06593|PHYA3_AVESA Phytochrome A type 3 OS=Avena sativa GN=PHYA3 PE=1 SV=3
Length = 1129
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/943 (57%), Positives = 681/943 (72%), Gaps = 14/943 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLI 77
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LI
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLI 79
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA A
Sbjct: 80 QTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATA 139
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 140 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 199
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 200 YKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKPG 259
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+R L MKNKVRMICDC A +KVI+ + L +SLCGS LRAP
Sbjct: 260 LEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAP 319
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 320 HSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRYV 379
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ TPN
Sbjct: 380 PFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTPN 439
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA
Sbjct: 440 IMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGA 499
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+MHPR SFKAFL
Sbjct: 500 AALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAFL 559
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 560 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVT 619
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 620 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVVQR 679
Query: 671 MLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQK 728
ML A EE+ V +++ GP+ GPVILVVNAC ++D ++V+GVCFV QD+T K
Sbjct: 680 MLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 739
Query: 729 LVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLI 788
LVMDK+TR++GDY I+ +P+ LIPPIF DE G C EWN M KL+G R+E +++ML+
Sbjct: 740 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLL 799
Query: 789 GEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRT 848
GEVF N C +KN D L +++N ++G++ +K FGFFD+ GKY+E LLSAN++
Sbjct: 800 GEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKE 859
Query: 849 NAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQN 908
N G I+G+ CF+HVAS ELQ+ALQVQ+ SEQ + L Y+R I PL+G+ + +
Sbjct: 860 NEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRK 919
Query: 909 LMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEEWYDC 951
+ +DL+EEQ + + C Q+ I+ D D +SI E C
Sbjct: 920 ALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSC 962
>sp|P42497|PHYD_ARATH Phytochrome D OS=Arabidopsis thaliana GN=PHYD PE=1 SV=2
Length = 1164
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/936 (57%), Positives = 681/936 (72%), Gaps = 19/936 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWL+ H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+ FLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVM 731
A E +NVE+KL+ FG + +VVNAC ++D N++GVCFVGQD+TG K+VM
Sbjct: 722 CALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVM 781
Query: 732 DKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKREEAIERMLIGEV 791
DK+ IQGDY I+ SP+ LIPPIF DE+ CLEWN MEKL+G R E I ++L+ EV
Sbjct: 782 DKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREV 841
Query: 792 FTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAE 851
F CR+K D LTK IV++ I GQD DK F FFD++G++++ALL+ NKR + +
Sbjct: 842 FGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSID 898
Query: 852 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 911
GKI G CFL + SPELQ AL+VQR E + +L YI + I+ PL+G+ F +L+
Sbjct: 899 GKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLE 958
Query: 912 TSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
DL+E+QKQLL+TSV C++Q++ IV D D++SI++
Sbjct: 959 DMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDD 994
>sp|P42499|PHYB_SOYBN Phytochrome B OS=Glycine max GN=PHYB PE=3 SV=1
Length = 1156
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/931 (56%), Positives = 663/931 (71%), Gaps = 35/931 (3%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
F+YS S+ I+S + VP ++AYL ++QRG IQPFG MIAVDE +F +LGYS+NA +M
Sbjct: 64 FNYSESIRIASES--VPEQQITAYLVKIQRGGFIQPFGSMIAVDEPSFRILGYSDNARDM 121
Query: 104 LDLAPHAVPNIEQQD--------------------ALTLGIDVRTLFTSSGAAALQKAAN 143
L + P +VP+++ ++ A LG DVR LFT S A L+KA +
Sbjct: 122 LGITPQSVPSLDDKNDAAFALGPQSVPSLDDKNDAAFALGTDVRALFTHSSALLLEKAFS 181
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S + +
Sbjct: 182 AREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQEALVR 241
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AIS+LQSLPS ++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +RPDLEPY+G
Sbjct: 242 AISQLQSLPSADVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDLEPYIG 301
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL APHGCHA+
Sbjct: 302 LHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLGAPHGCHAQ 361
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPLRYACEFL+
Sbjct: 362 YMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLM 420
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALY
Sbjct: 421 QAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALY 480
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPG LG G
Sbjct: 481 FQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGLPRLGMQFVGWQVA 540
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
IT KDFLFWFRSHTAKEIKWGGAK + G++MHP SSFKAFLEVVK RSLPWE+
Sbjct: 541 YITEKDFLFWFRSHTAKEIKWGGAKLILRTRMMGQRMHPLSSFKAFLEVVKSRSLPWENA 600
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILR S +D +SK +V+ + ++ +DEL + EMVRLIETA P
Sbjct: 601 EMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQELQGVDELSSVAREMVRLIETATAP 660
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLEERNV 682
I AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + V +LS E++NV
Sbjct: 661 IFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETVNKLLSRE--EDKNV 718
Query: 683 EIKLRAFGPRETSGPVILVVNACCTQDTKENVIGVCFVGQDITGQKLVMDKYTRIQGDYV 742
E K+R FG + LVVNAC ++ NV+GVCFVGQ++TGQK+VM K+ IQGDY
Sbjct: 719 ETKMRTFGKEHQNKAAFLVVNACSSKHFTNNVVGVCFVGQNVTGQKIVMHKFINIQGDYK 778
Query: 743 GIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLSGLKRE------EAIERMLIGEVFTVKN 796
IV SP+ LIPPIF +D++ CLEWN MEKL + I +ML+GEVF
Sbjct: 779 AIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLDPSNENVTVGGVDVIGKMLVGEVF---G 835
Query: 797 FGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQGKYVEALLSANKRTNAEGKISG 856
C++K D++TK IV++ + GQD DK F F D+ GKYV+ L+ANKR N EG+I G
Sbjct: 836 SCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEGQIIG 895
Query: 857 ILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLS 916
CFL + SPELQ AL+ QR E+ + +L YI + ++KPL+GI F +L+ + L+
Sbjct: 896 AFCFLQIMSPELQQALKAQRQQEKEFLGRMKELAYICQGVKKPLSGIRFTNSLLEATSLT 955
Query: 917 EEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
EQKQ L+TSV C++Q+ I+ D D+ESIE+
Sbjct: 956 NEQKQFLETSVACEKQMLKIIRDVDLESIED 986
>sp|P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1
Length = 1115
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/950 (55%), Positives = 676/950 (71%), Gaps = 40/950 (4%)
Query: 10 NYSR----SSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
NY + SSSA S N + AQ + DAKL +F++S FDYS SV + NV
Sbjct: 3 NYGKAVTFSSSATSNLNTGKAIAQYNADAKLMAEFEQSRESGKSFDYSRSV--IHAPQNV 60
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
++AYL R+QRG LIQPFGCM+A++E +F ++G+SEN ++L L +E +
Sbjct: 61 TEEEMTAYLSRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKS----GVEPPER 116
Query: 120 LTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
++L GID RTLFT S A+L KA E++LLNPI +H K + KPFYA+LHRIDVG+VID
Sbjct: 117 MSLIGIDARTLFTLSSRASLAKAVASREISLLNPIWVHSKINQKPFYAVLHRIDVGIVID 176
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEP N D + AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMV
Sbjct: 177 LEPANSADPALLLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVMV 236
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+
Sbjct: 237 YKFHDDSHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVL 296
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
Q ++L QPL L STLR+PHGCH +YM NMGSIASLVM+V IN +E KLW
Sbjct: 297 QCEELKQPLCLVNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSE---------SMKLW 347
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVCHHTSPR+VPFPLRYACEFL+Q F +Q+ E++L++QL EK IL+TQT+LCDMLLR
Sbjct: 348 GLVVCHHTSPRYVPFPLRYACEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDMLLR 407
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P GIVTQTP++MDLV+CDGAALYY GK WLLGVTPTE Q+KDIAEWLL H STGLS
Sbjct: 408 DAPFGIVTQTPSIMDLVRCDGAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLS 467
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TD L +AGYPGA LGDAV G+A +ITSKDFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 468 TDCLSDAGYPGAPLLGDAVSGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGG 527
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
+MHPRSSF AFLEVVK RSLPWED E++AIHSLQLI+R SLQ + E+ V+ P +D
Sbjct: 528 RMHPRSSFIAFLEVVKSRSLPWEDSEINAIHSLQLIMRDSLQG-IGENYMKSVSSPQQND 586
Query: 599 RIE-KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+ EL + E+VRL+ETA VPI VD+SG +NGWN+K AELTGL + AIG L+
Sbjct: 587 SDGVRFYELSSMALELVRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLI 646
Query: 658 DLVAG-DSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENV 714
D V DS + K ++ A E+RNVE+KL FG T V LVVNAC ++D K ++
Sbjct: 647 DDVTHEDSHETFKALMCRALQGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDYKNDI 706
Query: 715 IGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKL 774
IGVCFVGQDIT +K VMDK+ R+QGDY I+ S + LIPPIF +DE+ C EWN ME+L
Sbjct: 707 IGVCFVGQDITPEKAVMDKFVRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAAMERL 766
Query: 775 SGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDADKILFGFFDQQ 834
+GL + E I + L GE+F CR+K D LTK I++ + ISG D +K+ FGFFD++
Sbjct: 767 TGLVKCEVIGKRLPGEIF---GGLCRLKGQDALTKFMILLYQGISGHDTEKLSFGFFDRK 823
Query: 835 GKYVEALLSANKRTNAEGKISGILCFLH---VASPELQYALQVQRISEQAAANSLNKLEY 891
G +++ ++ANKRT+ G I G CFL V P++ A ++ ++ ++L + Y
Sbjct: 824 GNFIDVFITANKRTDERGNIIGCFCFLQTMAVDHPQIS-ARDIE--DDRECLSTLKEFAY 880
Query: 892 IRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTD 941
I+++++ PLNGI F L+ + S+ QKQ L+TS C++Q+ +I+++ D
Sbjct: 881 IQQQMKNPLNGIRFTHKLLEGTVTSDHQKQFLETSEACEKQILSIIENMD 930
>sp|P25848|PHY1_CERPU Light-sensor Protein kinase OS=Ceratodon purpureus GN=PHY1 PE=3
SV=3
Length = 1307
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/793 (62%), Positives = 609/793 (76%), Gaps = 17/793 (2%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SATKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QR LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
E V DVPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +LTGYDRVM
Sbjct: 179 EAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMA 238
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
+KFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I DC A PVK+I
Sbjct: 239 FKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLI 298
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
QD + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+ ++GRKLW
Sbjct: 299 QDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLW 358
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVC HTSPR VPFPLR CEFL+QVFG+Q+N VEL+AQLREKHILRTQT+LCDMLLR
Sbjct: 359 GLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLLCDMLLR 418
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P+GIV+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE+H STGLS
Sbjct: 419 DAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLS 478
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TDSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTA E+KWGGAKHD KD GR
Sbjct: 479 TDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGR 538
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
KMHPRSSFKAFLEVV +RS PWEDVEMDAIHSLQLILRGS +D D+K +++ D
Sbjct: 539 KMHPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHARLNDL 598
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV- 657
+++ ++E + NEM R++ETAA PILAVD+ G +N WN+K A++TGL V++A+ +L
Sbjct: 599 KLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTK 658
Query: 658 DLVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPRETSGPVILVVNACCTQDTKENVI 715
DLV +SV VV+ +LS A EE+NVEIKL+ FG + T VIL+VNACC++D + V+
Sbjct: 659 DLVLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDFVV 718
Query: 716 GVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDGMEKLS 775
GV FVGQD+T Q++ MD++TRIQG V P L+ P F DE GR + N L
Sbjct: 719 GVFFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSA---LG 775
Query: 776 GLKREE--AIERM 786
GLK ++ER+
Sbjct: 776 GLKDHATGSVERL 788
>sp|P42498|PHYE_ARATH Phytochrome E OS=Arabidopsis thaliana GN=PHYE PE=1 SV=2
Length = 1112
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/958 (52%), Positives = 666/958 (69%), Gaps = 46/958 (4%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS 62
+++ S +S+ + + AQ S+DA L DF +S F+YS SV S ++VP
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSV--ISPPNHVPDE 61
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL-- 120
++AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDK 119
Query: 121 ---TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+Q ++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + KL
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSS---------KL 350
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLL
Sbjct: 351 WGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLL 410
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTG 476
RD+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STG
Sbjct: 411 RDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTG 470
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
L+TDSLV+AGYPGA++LGDAVCG+AA +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 471 LTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDD 530
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S V S
Sbjct: 531 AGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRP--------VLSG 582
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L
Sbjct: 583 NGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSL 642
Query: 657 VD-LVAGDSVDVVKNMLSSAFL--EERNVEIKLRAFGPR---ETSGPVILVVNACCTQDT 710
D +V +S ++++L A EE++V +KLR FG + S V ++VN+C ++D
Sbjct: 643 ADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDY 702
Query: 711 KENVIGVCFVGQDITGQKLVMDKYTRIQGDYVGIVSSPSALIPPIFMTDEDGRCLEWNDG 770
EN+IGVCFVGQDIT +K + D++ R+QGDY IV S + LIPPIF +DE+ C EWN
Sbjct: 703 TENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAA 762
Query: 771 MEKLSGLKREEAIERMLIGEVFTVKNFGCRVKNHDTLTKLRIVMNKVISGQDA-DKILFG 829
MEKL+G + E I +ML GEVF V C+VK D+LTK I + + I+G + + L
Sbjct: 763 MEKLTGWSKHEVIGKMLPGEVFGVF---CKVKCQDSLTKFLISLYQGIAGDNVPESSLVE 819
Query: 830 FFDQQGKYVEALLSANKRTNAEGKISGILCFLHVASPELQYALQVQRISEQAAANSLNKL 889
FF+++GKY+EA L+ANK TN EGK+ I CF + + L + E +A SLN+L
Sbjct: 820 FFNKEGKYIEASLTANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLNEL 875
Query: 890 EYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQEQLTNIVDDTDIESIEE 947
Y+R+EI+ PLNGI F L+ +S++S Q+Q L+TS C++Q+T I++ TD++SIEE
Sbjct: 876 TYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEE 933
>sp|P06595|PHYA5_AVESA Phytochrome A type 5 (Fragment) OS=Avena sativa GN=PHYA5 PE=1 SV=3
Length = 495
Score = 589 bits (1519), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/477 (61%), Positives = 359/477 (75%), Gaps = 12/477 (2%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+L
Sbjct: 19 QARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEMLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ P
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGNP 438
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
N+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AG
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAG 495
>sp|Q55168|PHY1_SYNY3 Phytochrome-like protein cph1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=cph1 PE=1 SV=1
Length = 748
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 267/523 (51%), Gaps = 49/523 (9%)
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+ LIQP G ++ + E + T+ S N +L +P + LG + +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSPEDL----------LGRTLGEVF 69
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFY---AILHRIDVGLVI-DLEPV-NPD 185
S +Q G+++ LNP + + G F + HR GL++ +LEP D
Sbjct: 70 DSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD 129
Query: 186 DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDE 245
++P L Y +A A++RL+ N+ DV+V EV +TG+DRVM+Y+F E+
Sbjct: 130 NLPF-----LGFYHMANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENN 182
Query: 246 HGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC--LAPPVKVIQDKKL 303
HG+V+AE +R D+EPYLG HYP +DIPQ +R L + N +R+I D +A P+ +
Sbjct: 183 HGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPST 242
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
++ + L S LR+ + CH Y++NMG ASL +S+ + LWGL+ C
Sbjct: 243 NRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLI-------------KDGHLWGLIAC 289
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR--DSP 421
HH +P+ +PF LR ACEF +V ++ + + + + VL D + D
Sbjct: 290 HHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFV 349
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
G+ ++ L GAA+ + KL L+G TP E+ ++ + +W LE T S
Sbjct: 350 EGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQW-LENREVQDVFFTSS 408
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG---AKHDSGGKDGGR 538
L + YP A+ G+ A+ I +FL WFR + + WGG +++ +DG
Sbjct: 409 LSQI-YPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKI 467
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQ-----LILR 576
++HPR SF + E+V+ +SLPW+ VE+ + +L+ LILR
Sbjct: 468 ELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILR 510
>sp|Q9LCC2|PHYA_NOSS1 Cyanobacterial phytochrome A OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=aphA PE=3 SV=1
Length = 765
Score = 256 bits (654), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 270/526 (51%), Gaps = 51/526 (9%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G ++ ++E +L S N +L + NI Q+ + L S
Sbjct: 26 IQPHGVLLVLEEPGLKILQVSNNTWGILGINAE---NILQKK-------LEDLLDSFQIE 75
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKP---FYAILHRIDVG-LVIDLEP-VNPDDVPVTA 191
+Q + G + +NP I + G F A+ HR G L+++LEP + +++P
Sbjct: 76 RIQSGLSSGNLEFINPTKIWIRKKGDDYAVFDAVFHRNTEGFLILELEPAITQENIPF-- 133
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
L Y LA +I++LQ + N+ C ++V EV +T +DRVM+YKF +D HG V+A
Sbjct: 134 ---LSFYHLAKASINQLQK--TANLRDFCQIIVQEVRKVTDFDRVMLYKFDDDGHGSVIA 188
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ--DKKLDQPLSL 309
E + LEPYLG HYP +DIP+ +R L + N +R+I + A +++I + D+P+ L
Sbjct: 189 EEKLDSLEPYLGLHYPESDIPKPARKLFISNSIRVIPNAQAQAIQMIPALNPVSDRPVDL 248
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
S LR+ CH Y+ NMG ASL +S+ + KLWGL+ CHH S +
Sbjct: 249 TNSILRSAANCHLEYLHNMGVGASLTISLI-------------KDNKLWGLIACHHLSAK 295
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV--GIVTQ 427
+V + LR ACEFL +V +++ E ++ Q++L + + ++ G++
Sbjct: 296 YVSYELRKACEFLGRVIFAEISAREETEDYDYRMNLTHIQSLLVEYMSQEDNFVDGLIKH 355
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
P+++DL GAA+ + L+G TP E + + +W L+ + TDSL + Y
Sbjct: 356 QPSLLDLTSAQGAAVCFGDHCTLIGETPKAEDLVFLVQW-LKNNVEEEVFYTDSLPQV-Y 413
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH---DSGGKDGGRKMHPRS 544
P A + G+ A+ I+ ++++ WFR + + WGG + + DG ++ PR
Sbjct: 414 PDAERYKNVASGLLAIPISQRNYVLWFRPEVIQTVNWGGDPNQPFEVNKLDGNVRLCPRK 473
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQ-----LILRGSLQDEVAE 585
SF+ + E V+ SLPW VE+ A L+ ++LR + DE+A+
Sbjct: 474 SFELWKETVRLTSLPWRYVEIRAALELRKAIVNIVLRQA--DELAQ 517
>sp|Q9R6X3|PHYB_NOSS1 Cyanobacterial phytochrome B OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=bphB PE=3 SV=1
Length = 751
Score = 243 bits (619), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 262/526 (49%), Gaps = 50/526 (9%)
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGA 135
LIQP G ++ + E + T+L S N +L P + L + L +
Sbjct: 27 LIQPHGVLLVLQEVDLTILQVSNNTFNILGRHPEQL----------LNQHLSCLLEAEQL 76
Query: 136 AALQKAANFGEVNLLNPI--LIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
+ L+ ++ ++NP+ +I F I HR + L+++LE N D
Sbjct: 77 SLLKDCLAQEDLQIINPLEFIIKSHNESISFDVIAHRSNNLLILELE-ANLSD---KTHS 132
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
+ Y L A+ +LQ + + + +L EV +TG+DRVMVY+F E +G+V+AE
Sbjct: 133 FFRFYHLVKLAMLKLQG--TATTTEISQILAQEVRKITGFDRVMVYRFDEQWNGKVIAEV 190
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV--IQDKKLDQPLSLCG 311
+ L YLG +YPA+DIPQ +R L +N +R+I D PV + I + DQPL L
Sbjct: 191 KPEYLTSYLGLNYPASDIPQQARKLYSQNWLRLIPDAKYQPVPIVPINNPLNDQPLDLSR 250
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFV 371
S LR+ H YM+NMG AS+ +S+ N+ KLWGL+ CHH SP+++
Sbjct: 251 SVLRSVSPLHIEYMQNMGVTASMSISIMKNQ-------------KLWGLIACHHQSPKYI 297
Query: 372 PFPLRYACEFLIQVFGVQV-----NKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
P+ +R ACEFL Q+ V++ +++ E Q++ H Q + + D ++
Sbjct: 298 PYEIRSACEFLGQMTSVEMSAKEDSEDTEDKIQVKSVHSKLVQYMSAE---NDFINALID 354
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
PN++DLVK GAA+ + G +G P I+ + EW+ + + +TDSL
Sbjct: 355 HQPNILDLVKAQGAAVCFNGNSCTVGQVPPMPDIQVLVEWMSQ-NIHEEIFATDSLATV- 412
Query: 487 YPGALALGDAVCGIAAVKI--TSKDFLFWFRSHTAKEIKWGGAKHDSGG--KDGGRKMHP 542
YP A L D G+ A+ I + K+++ WFR + + WGG H +G ++ P
Sbjct: 413 YPDAEKLRDVASGLIALSISRSQKNYILWFRPEVVRTVDWGGNPHKPVEVIANGEIRLSP 472
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL---QDEVAE 585
R SF + E V +S PW+ E++A L+ + G + DE+A+
Sbjct: 473 RKSFDLWKETVLLKSQPWKSHEVNAALELRSAIIGIVLQKADELAQ 518
>sp|Q9HWR3|BPHY_PSEAE Bacteriophytochrome OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=bphP PE=1 SV=1
Length = 728
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 201/415 (48%), Gaps = 49/415 (11%)
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
++ S+ L A+ I L + SLL +V +E+ +TGYDRVM Y+F D+ GEVVAE
Sbjct: 119 SITSFTLNAQRIIAQVQLHNDTASLLSNV-TDELRRMTGYDRVMAYRFRHDDSGEVVAES 177
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ--DKKLDQPLSLCG 311
RR DLE YLG YPA+DIP +R L ++N +R+I D P++V + + ++ L
Sbjct: 178 RREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSY 237
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFV 371
S LR+ H Y+ NMG AS+ +S+ + G KLWGL CHH SP+ +
Sbjct: 238 SVLRSVSPIHCEYLTNMGVRASMSISIVV-------------GGKLWGLFSCHHMSPKLI 284
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT-----VLCDMLLRDSPVGIVT 426
P+P+R + Q+F + VE Q R +LR T + D G +
Sbjct: 285 PYPVRMS----FQIFSQVCSAIVERLEQGRIAELLRVSTERRLALARRARDADDLFGALA 340
Query: 427 QTPN-VMDLVKCDGAALYYRGK-LWLLGVTPTEEQIKDIAEWLLE------YHRGSTGLS 478
+ + L+ CDGA + G+ L + G E Q ++ + L YH +
Sbjct: 341 HPDDGIAALIPCDGALVMLGGRTLSIRG--DFERQAGNVLQRLQRDPERDIYHTDNWPQP 398
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKD--FLFWFRSHTAKEIKWGGAKHD--SGGK 534
++ + G CG+ A++ ++ ++FWFR I+WGG + G
Sbjct: 399 SEDSPDGG---------DCCGVLAIRFHRQESGWIFWFRHEEVHRIRWGGKPEKLLTIGP 449
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
G R + PR SF+A+ EVV+ S PW + ++ L+L L + AE +M
Sbjct: 450 SGPR-LTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDLMELCLNHAAEVDRM 503
>sp|Q9RZA4|BPHY_DEIRA Bacteriophytochrome OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=bphP PE=1 SV=1
Length = 755
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 233/517 (45%), Gaps = 53/517 (10%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G ++ D + VL S NA L Q+ + G + L A
Sbjct: 35 IQPHGALLTADGHSGEVLQMSLNAATFLG----------QEPTVLRGQTLAALLPEQWPA 84
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
LQ A G + L + +HR+ L+++ EP D T AL+
Sbjct: 85 -LQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEPTEAWDS--TGPHALR 141
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
+ A L+S P N+ L +V V +LTG+DRVM+YKF D GEV+AE RR
Sbjct: 142 NAMFA------LESAP--NLRALAEVATQTVRELTGFDRVMLYKFAPDATGEVIAEARRE 193
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP--PVKVIQDKKLDQPLSLCGSTL 314
L +LG +PA+DIP +R L ++ +R+ D A P+ + + + + P L G+ L
Sbjct: 194 GLHAFLGHRFPASDIPAQARALYTRHLLRLTADTRAAAVPLDPVLNPQTNAPTPLGGAVL 253
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RA H +Y+ NMG +SL +SV + +LWGL+ CHH +P +P
Sbjct: 254 RATSPMHMQYLRNMGVGSSLSVSVVVGG-------------QLWGLIACHHQTPYVLPPD 300
Query: 375 LRYACEFLIQVFG--VQVNKEVELSA---QLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
LR E+L ++ VQV + +++A LRE H + D+ +
Sbjct: 301 LRTTLEYLGRLLSLQVQVKEAADVAAFRQSLREHHARVALAAAHSLSPHDT---LSDPAL 357
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
+++ L++ G L + G+ LG P + + W LE G+ + TD+L + +P
Sbjct: 358 DLLGLMRAGGLILRFEGRWQTLGEVPPAPAVDALLAW-LETQPGAL-VQTDALGQL-WPA 414
Query: 490 ALALGDAVCGIAAVKITS--KDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
L + G+ A+ + + L W R E+ WGGA D D G PR SF
Sbjct: 415 GADLAPSAAGLLAISVGEGWSECLVWLRPELRLEVAWGGATPDQAKDDLG----PRHSFD 470
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
+LE + + PW E++ L+ L G+L + ++
Sbjct: 471 TYLEEKRGYAEPWHPGEIEEAQDLRDTLTGALGERLS 507
>sp|Q55434|PHY2_SYNY3 Phytochrome-like protein cph2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=cph2 PE=1 SV=1
Length = 1276
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC-RRPDLEPYLGFHYPATDIPQASRFLIM 280
V+V E G DRV +YKF D GEV+AE R L LG H+P DIP +R +
Sbjct: 30 VIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPPQAR-EEL 88
Query: 281 KNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG-------CHARYMENMGSIAS 333
N+ +MI V V +K LS S +G CH +Y+ MG ++S
Sbjct: 89 GNQRKMIA------VDVAHRRKKSHELSGRISPTEHSNGHYTTVDSCHIQYLLAMGVLSS 142
Query: 334 LVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSP-RFVPFPLRYAC----EFLIQVFGV 388
L + V Q ++LWG++ HH+ P RF E + +
Sbjct: 143 LTVPVM-------------QDQQLWGIMAVHHSKPRRFTEQEWETMALLSKEVSLAITQS 189
Query: 389 QVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q++++V Q++E + R +T + D P V V+ DGA LY
Sbjct: 190 QLSRQVH-QQQVQEALVQRLETTVAQY--GDRPETWQYALETVGQAVEADGAVLY 241
>sp|P0AEC4|ARCB_SHIFL Aerobic respiration control sensor protein ArcB OS=Shigella
flexneri GN=arcB PE=3 SV=1
Length = 778
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 852 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 911
GK G++ F + +Y Q E+A+ + + I E+R PLNGI + ++
Sbjct: 254 GKRHGLMGFGRDITERKRY----QDALERASRDKTTFISTISHELRTPLNGIVGLSRILL 309
Query: 912 TSDLSEEQKQLLKTSVLCQEQLTNIVDD-TDIESIE 946
++L+ EQ++ LKT + L NI +D D++ +E
Sbjct: 310 DTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKME 345
>sp|P0AEC3|ARCB_ECOLI Aerobic respiration control sensor protein ArcB OS=Escherichia coli
(strain K12) GN=arcB PE=1 SV=1
Length = 778
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 852 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 911
GK G++ F + +Y Q E+A+ + + I E+R PLNGI + ++
Sbjct: 254 GKRHGLMGFGRDITERKRY----QDALERASRDKTTFISTISHELRTPLNGIVGLSRILL 309
Query: 912 TSDLSEEQKQLLKTSVLCQEQLTNIVDD-TDIESIE 946
++L+ EQ++ LKT + L NI +D D++ +E
Sbjct: 310 DTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKME 345
>sp|P58363|ARCB_ECO57 Aerobic respiration control sensor protein ArcB OS=Escherichia coli
O157:H7 GN=arcB PE=3 SV=1
Length = 778
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 852 GKISGILCFLHVASPELQYALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMG 911
GK G++ F + +Y Q E+A+ + + I E+R PLNGI + ++
Sbjct: 254 GKRHGLMGFGRDITERKRY----QDALERASRDKTTFISTISHELRTPLNGIVGLSRILL 309
Query: 912 TSDLSEEQKQLLKTSVLCQEQLTNIVDD-TDIESIE 946
++L+ EQ++ LKT + L NI +D D++ +E
Sbjct: 310 DTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKME 345
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 871 ALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 930
A++ R + QA + L + + E R PLNG++ M ++ T+ L EQK+ L T
Sbjct: 178 AVREARHANQAKSRFLANMSH---EFRTPLNGLSGMTEVLATTRLDAEQKECLNTIQASA 234
Query: 931 EQLTNIVDDT-DIESIE 946
L ++V++ DI +IE
Sbjct: 235 RSLLSLVEEVLDISAIE 251
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 871 ALQVQRISEQAAANSLNKLEYIRREIRKPLNGIAFMQNLMGTSDLSEEQKQLLKTSVLCQ 930
A++ R + QA + L + + E R PLNG++ M ++ T+ L EQK+ L T
Sbjct: 178 AVREARHANQAKSRFLANMSH---EFRTPLNGLSGMTEVLATTRLDAEQKECLNTIQASA 234
Query: 931 EQLTNIVDDT-DIESIE 946
L ++V++ DI +IE
Sbjct: 235 RSLLSLVEEVLDISAIE 251
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 342,427,748
Number of Sequences: 539616
Number of extensions: 14591011
Number of successful extensions: 38264
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 37724
Number of HSP's gapped (non-prelim): 312
length of query: 953
length of database: 191,569,459
effective HSP length: 127
effective length of query: 826
effective length of database: 123,038,227
effective search space: 101629575502
effective search space used: 101629575502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)