Query 002212
Match_columns 953
No_of_seqs 302 out of 1551
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 17:11:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 100.0 1E-42 3.6E-47 379.4 12.1 157 1-171 199-355 (369)
2 2vvg_A Kinesin-2; motor protei 100.0 3.7E-42 1.3E-46 372.7 13.0 143 1-147 205-347 (350)
3 2y65_A Kinesin, kinesin heavy 100.0 1.3E-42 4.3E-47 378.2 9.1 144 1-149 204-347 (365)
4 1goj_A Kinesin, kinesin heavy 100.0 2E-41 6.8E-46 367.4 14.2 143 1-148 201-343 (355)
5 1x88_A Kinesin-like protein KI 100.0 9.1E-42 3.1E-46 370.4 11.4 140 1-144 219-359 (359)
6 3b6u_A Kinesin-like protein KI 100.0 4.4E-42 1.5E-46 374.9 7.7 146 1-149 221-367 (372)
7 3bfn_A Kinesin-like protein KI 100.0 1.9E-41 6.5E-46 371.7 10.4 144 1-149 218-361 (388)
8 1t5c_A CENP-E protein, centrom 100.0 3.6E-41 1.2E-45 364.7 11.8 145 1-149 195-342 (349)
9 2zfi_A Kinesin-like protein KI 100.0 4.4E-41 1.5E-45 365.8 10.6 143 1-143 210-362 (366)
10 2owm_A Nckin3-434, related to 100.0 5.3E-41 1.8E-45 373.3 10.7 141 1-143 261-421 (443)
11 2wbe_C Bipolar kinesin KRP-130 100.0 2.5E-41 8.5E-46 368.8 6.7 142 1-146 229-372 (373)
12 3t0q_A AGR253WP; kinesin, alph 100.0 6.4E-40 2.2E-44 354.7 12.6 136 1-139 213-348 (349)
13 1f9v_A Kinesin-like protein KA 100.0 5.3E-40 1.8E-44 355.2 11.9 136 1-139 210-345 (347)
14 3lre_A Kinesin-like protein KI 100.0 5.5E-40 1.9E-44 356.0 10.7 134 1-135 221-355 (355)
15 3nwn_A Kinesin-like protein KI 100.0 4E-40 1.4E-44 357.8 8.8 132 1-135 228-359 (359)
16 1ry6_A Internal kinesin; kines 100.0 1.4E-39 4.9E-44 353.7 11.0 138 1-147 205-343 (360)
17 2nr8_A Kinesin-like protein KI 100.0 7.8E-40 2.7E-44 355.4 8.8 132 1-135 227-358 (358)
18 3gbj_A KIF13B protein; kinesin 100.0 2.2E-39 7.5E-44 351.2 12.2 134 1-134 212-349 (354)
19 2h58_A Kinesin-like protein KI 100.0 3.2E-39 1.1E-43 347.1 12.4 130 1-136 200-329 (330)
20 4etp_A Kinesin-like protein KA 100.0 1.8E-39 6.3E-44 357.0 10.6 137 1-140 266-402 (403)
21 4a14_A Kinesin, kinesin-like p 100.0 2.9E-39 9.9E-44 348.7 10.6 132 1-133 207-344 (344)
22 1bg2_A Kinesin; motor protein, 100.0 1.6E-39 5.4E-44 348.9 7.9 129 1-135 197-325 (325)
23 2rep_A Kinesin-like protein KI 100.0 1.1E-38 3.8E-43 348.5 12.2 129 1-135 244-376 (376)
24 3dc4_A Kinesin-like protein NO 100.0 1.5E-38 5E-43 343.9 9.7 127 1-139 213-339 (344)
25 4h1g_A Maltose binding protein 100.0 4.4E-38 1.5E-42 364.5 12.9 131 1-136 582-712 (715)
26 2heh_A KIF2C protein; kinesin, 100.0 1.5E-37 5.3E-42 340.7 9.9 127 1-138 257-385 (387)
27 1v8k_A Kinesin-like protein KI 100.0 1.6E-37 5.6E-42 342.7 10.0 129 1-140 277-407 (410)
28 3u06_A Protein claret segregat 100.0 3E-37 1E-41 340.6 9.9 129 1-139 258-386 (412)
29 2kin_B Kinesin; motor protein, 100.0 1.1E-29 3.9E-34 233.5 6.2 99 57-163 1-99 (100)
30 3kin_B Kinesin heavy chain; mo 99.9 1.5E-28 5.2E-33 231.0 8.9 104 61-167 1-116 (117)
31 1c1g_A Tropomyosin; contractIl 96.5 0.64 2.2E-05 45.1 27.9 45 625-669 21-65 (284)
32 1i84_S Smooth muscle myosin he 95.5 0.032 1.1E-06 69.2 9.8 20 889-908 1147-1166(1184)
33 1i84_S Smooth muscle myosin he 95.0 0.061 2.1E-06 66.8 10.1 17 1-17 240-256 (1184)
34 3na7_A HP0958; flagellar bioge 87.5 18 0.00061 37.6 16.5 52 356-407 30-81 (256)
35 2b9c_A Striated-muscle alpha t 76.2 5 0.00017 39.4 6.8 139 595-746 8-146 (147)
36 3vkg_A Dynein heavy chain, cyt 75.1 1.5E+02 0.005 41.6 22.1 74 460-541 1902-1975(3245)
37 3vkg_A Dynein heavy chain, cyt 71.6 67 0.0023 44.7 17.7 105 499-623 2020-2124(3245)
38 3ol1_A Vimentin; structural ge 70.8 15 0.00051 34.6 8.4 41 363-403 18-58 (119)
39 3na7_A HP0958; flagellar bioge 70.0 1.1E+02 0.0036 31.8 15.7 33 501-533 151-184 (256)
40 2fxo_A Myosin heavy chain, car 68.5 74 0.0025 30.1 12.7 78 472-550 49-126 (129)
41 2dfs_A Myosin-5A; myosin-V, in 67.9 41 0.0014 42.1 13.7 25 379-403 921-945 (1080)
42 2dfs_A Myosin-5A; myosin-V, in 65.4 6 0.00021 49.2 5.8 46 351-399 1005-1050(1080)
43 3oja_B Anopheles plasmodium-re 64.1 35 0.0012 38.4 11.2 27 500-526 544-570 (597)
44 3s4r_A Vimentin; alpha-helix, 63.8 18 0.00061 33.0 7.1 39 363-401 54-92 (93)
45 3ol1_A Vimentin; structural ge 58.7 46 0.0016 31.3 9.2 80 788-867 34-113 (119)
46 2lw1_A ABC transporter ATP-bin 56.4 25 0.00084 31.3 6.6 28 807-834 20-47 (89)
47 3tnu_B Keratin, type II cytosk 53.7 47 0.0016 31.3 8.5 31 795-825 22-52 (129)
48 3tnu_A Keratin, type I cytoske 51.1 44 0.0015 31.7 7.8 32 794-825 23-54 (131)
49 2efr_A General control protein 48.3 2.2E+02 0.0074 28.3 13.1 72 685-756 26-98 (155)
50 3oja_B Anopheles plasmodium-re 47.5 1.7E+02 0.006 32.7 13.3 54 493-546 502-555 (597)
51 3o0z_A RHO-associated protein 44.0 1E+02 0.0036 31.1 9.5 106 365-480 51-156 (168)
52 3hnw_A Uncharacterized protein 43.8 55 0.0019 31.7 7.3 64 780-843 67-130 (138)
53 3iv1_A Tumor susceptibility ge 41.4 62 0.0021 29.1 6.7 46 702-747 19-71 (78)
54 2jee_A YIIU; FTSZ, septum, coi 38.9 1E+02 0.0035 27.9 7.7 62 599-666 8-76 (81)
55 3s4r_A Vimentin; alpha-helix, 33.6 1.9E+02 0.0064 26.3 8.7 64 286-374 27-93 (93)
56 2zdi_C Prefoldin subunit alpha 32.4 94 0.0032 29.7 7.0 57 699-765 14-70 (151)
57 2v71_A Nuclear distribution pr 31.6 4.4E+02 0.015 27.0 15.0 49 479-527 74-122 (189)
58 1go4_E MAD1 (mitotic arrest de 31.1 34 0.0012 32.0 3.4 35 800-834 10-44 (100)
59 1ik9_A DNA repair protein XRCC 27.9 4.3E+02 0.015 27.2 11.3 71 502-612 134-204 (213)
60 2zqm_A Prefoldin beta subunit 27.4 56 0.0019 29.4 4.2 65 762-833 44-108 (117)
61 3hnw_A Uncharacterized protein 27.4 1.3E+02 0.0046 29.0 7.0 42 356-397 94-135 (138)
62 3nmd_A CGMP dependent protein 26.2 1.6E+02 0.0054 26.2 6.6 29 249-277 35-63 (72)
63 2wt7_B Transcription factor MA 25.7 1.7E+02 0.0057 26.9 6.9 38 502-546 50-87 (90)
64 2v4h_A NF-kappa-B essential mo 25.1 4.5E+02 0.015 25.0 9.9 66 234-321 25-106 (110)
65 3u1c_A Tropomyosin alpha-1 cha 22.5 2.9E+02 0.0099 25.2 8.0 65 793-857 28-92 (101)
66 1z56_A Ligase interacting fact 22.5 47 0.0016 35.3 3.1 70 626-715 159-228 (246)
67 1fxk_A Prefoldin; archaeal pro 22.2 51 0.0017 29.3 2.9 66 762-834 39-104 (107)
68 3swk_A Vimentin; cytoskeleton, 22.0 4.2E+02 0.014 23.6 8.7 79 290-400 1-84 (86)
69 2v71_A Nuclear distribution pr 20.7 6.9E+02 0.024 25.6 17.1 119 254-390 35-155 (189)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=1e-42 Score=379.35 Aligned_cols=157 Identities=48% Similarity=0.620 Sum_probs=140.7
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.+...+ ....|+|+|||||||||.+++++.|.|++|+++||+||++||+||.+|++
T Consensus 199 ~N~~SSRSH~if~i~v~~~~~~~~--~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~---- 272 (369)
T 3cob_A 199 MNEQSSRSHLIVSVIIESTNLQTQ--AIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSS---- 272 (369)
T ss_dssp TTCHHHHSEEEEEEEEEEEETTTC--CEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHT----
T ss_pred CCCCCCcceEEEEEEEEEecCCCC--cEEEEEEEEEeCCCCCcccccCccchhhHHHHHHHHHHHHHHHHHHHHhc----
Confidence 799999999999999998766443 34679999999999999999999999999999999999999999999975
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCchhHHHHHHHHHHHH
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASGDVIAMRMEIQQLK 160 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~dv~~Lr~eIq~LK 160 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+||+.|+|.|++|.++ .+|..|+
T Consensus 273 ~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~--------~ei~~L~ 344 (369)
T 3cob_A 273 GNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--------KEVARLK 344 (369)
T ss_dssp TCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC--------HHHHHHH
T ss_pred CCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhcccCCcccCCH--------HHHHHHH
Confidence 35699999999999999999999999999999999999999999999999999999999999987 3477888
Q ss_pred HHHHHHHhhhc
Q 002212 161 KEVSRLRGIAH 171 (953)
Q Consensus 161 ~ELsrLR~~l~ 171 (953)
+++..++...+
T Consensus 345 ~~l~~~~~~~~ 355 (369)
T 3cob_A 345 KLVSYWKEQAG 355 (369)
T ss_dssp HHTTCC-----
T ss_pred HHHHHHHHhcC
Confidence 88877776543
No 2
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=3.7e-42 Score=372.70 Aligned_cols=143 Identities=59% Similarity=0.760 Sum_probs=113.8
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.....+....+.|+|+|||||||||..++++.|.|++|+++||+||++||+||.+|++
T Consensus 205 ~N~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~---- 280 (350)
T 2vvg_A 205 MNDTSSRSHSIFMVRIECSEVIENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVE---- 280 (350)
T ss_dssp ----CTTCEEEEEEEEEEEEC----CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHH----
T ss_pred CCCCCCcceEEEEEEEEEeeccCCCccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHc----
Confidence 7999999999999999987766665566789999999999999999999999999999999999999999999986
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCch
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASG 147 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~ 147 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+||+.|+|+|++|+++..
T Consensus 281 ~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~ 347 (350)
T 2vvg_A 281 GATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKD 347 (350)
T ss_dssp TCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTT
T ss_pred CCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhccccceecCCchh
Confidence 2379999999999999999999999999999999999999999999999999999999999998765
No 3
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=1.3e-42 Score=378.15 Aligned_cols=144 Identities=51% Similarity=0.674 Sum_probs=117.8
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.....+ ....|+|+|||||||||..++++.|.|++|+++||+||++||+||.+|++ +
T Consensus 204 ~N~~SSRSH~if~i~v~~~~~~~~--~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~---~ 278 (365)
T 2y65_A 204 MNEHSSRSHSVFLINVKQENLENQ--KKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALAD---G 278 (365)
T ss_dssp HHHHHHTSEEEEEEEEEEEETTTC--CEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHH---C
T ss_pred CCCCCCCceEEEEEEEEEEecCCC--CEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhc---C
Confidence 689999999999999998765443 34569999999999999999999999999999999999999999999975 3
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCchhH
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASGDV 149 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~dv 149 (953)
+..||||||||||+||+|||||||+|+||+||||+..+++||++||+||+||+.|+|.|++|+++....
T Consensus 279 ~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~ 347 (365)
T 2y65_A 279 NKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEE 347 (365)
T ss_dssp CCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHH
T ss_pred CCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHHH
Confidence 457999999999999999999999999999999999999999999999999999999999999887754
No 4
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=2e-41 Score=367.44 Aligned_cols=143 Identities=58% Similarity=0.756 Sum_probs=133.9
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.+...+ ....|+|+|||||||||.+++++.|.|++|+++||+||++||+||.+|++ +
T Consensus 201 ~N~~SSRSH~if~i~v~~~~~~~~--~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~---~ 275 (355)
T 1goj_A 201 MNQESSRSHSIFVITITQKNVETG--SAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTD---G 275 (355)
T ss_dssp TTCCGGGCEEEEEEEEEEEETTTT--EEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHH---C
T ss_pred CCCCCCCceEEEEEEEEEeccCCC--ceeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHHHHHHHHHHHhc---C
Confidence 899999999999999998876544 34679999999999999999999999999999999999999999999975 4
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCchh
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASGD 148 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~d 148 (953)
+..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+||+.|+|+|++|.++...
T Consensus 276 ~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 276 KSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp SCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred CCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHHHHHHHhhccCCceeCCCCCHH
Confidence 56799999999999999999999999999999999999999999999999999999999999987664
No 5
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=9.1e-42 Score=370.41 Aligned_cols=140 Identities=56% Similarity=0.703 Sum_probs=112.5
Q ss_pred CCCCCCccceeEEEEEEEeec-CCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcC
Q 002212 1 MNRASSRSHSVFTCIIESKWE-SQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISN 79 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~-~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~ 79 (953)
||..|||||+||+|+|.+... .++......|+|+|||||||||.+++++.|.|++|+++||+||++||+||.+|+.
T Consensus 219 ~N~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~--- 295 (359)
T 1x88_A 219 MNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVE--- 295 (359)
T ss_dssp STTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHT---
T ss_pred CCCCCCCccEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhc---
Confidence 899999999999999987653 3444456789999999999999999999999999999999999999999999975
Q ss_pred CCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccC
Q 002212 80 GKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNED 144 (953)
Q Consensus 80 gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed 144 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+||+.|+|+|++|+.
T Consensus 296 -~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 296 -RTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp -TCSCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred -CCCCCccccchHHHHHHHHhCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCcceeCCC
Confidence 4579999999999999999999999999999999999999999999999999999999999963
No 6
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=4.4e-42 Score=374.91 Aligned_cols=146 Identities=61% Similarity=0.833 Sum_probs=117.2
Q ss_pred CCCCCCccceeEEEEEEEeecC-CCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcC
Q 002212 1 MNRASSRSHSVFTCIIESKWES-QGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISN 79 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~-~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~ 79 (953)
||..|||||+||+|+|.+.... ++....+.|+|+|||||||||..++++.|.|++|+++||+||++||+||.+|++
T Consensus 221 ~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~--- 297 (372)
T 3b6u_A 221 MNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVD--- 297 (372)
T ss_dssp HHHHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHC---
T ss_pred CCCCCCcceEEEEEEEEEeecCCCCCcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhHHHHHHHHHHHhc---
Confidence 6899999999999999986542 334456789999999999999999999999999999999999999999999974
Q ss_pred CCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCchhH
Q 002212 80 GKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASGDV 149 (953)
Q Consensus 80 gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~dv 149 (953)
++..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+||+.|+|+|++|+++....
T Consensus 298 ~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~~~ 367 (372)
T 3b6u_A 298 GKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDAL 367 (372)
T ss_dssp C---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC------
T ss_pred CCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHHHHHHHHHhhccccceecCChHHHH
Confidence 4557999999999999999999999999999999999999999999999999999999999999876543
No 7
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=371.72 Aligned_cols=144 Identities=44% Similarity=0.613 Sum_probs=105.4
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.....+. ....|+|+|||||||||..++++.|.|++|+++||+||++||+||.+|++
T Consensus 218 ~N~~SSRSH~If~i~v~~~~~~~~~-~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~---- 292 (388)
T 3bfn_A 218 LNQRSSRSHAVLLVKVDQRERLAPF-RQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQ---- 292 (388)
T ss_dssp ---CGGGSEEEEEEEEEEEESSTTC-CEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHT----
T ss_pred CCCCCCCCeEEEEEEEEEeccCCCC-ceeEEEEEEEECCCCcccccccCccchhHHHhHhhhhHHHHHHHHHHHhc----
Confidence 7999999999999999987654332 24679999999999999999999999999999999999999999999974
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCchhH
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASGDV 149 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~dv 149 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+||+.|+|+|++|+++....
T Consensus 293 ~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~ 361 (388)
T 3bfn_A 293 GLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHA 361 (388)
T ss_dssp TCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC-------------
T ss_pred CCCCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHHHHHHHHHHhhCcCcCcccCCCCHHH
Confidence 345999999999999999999999999999999999999999999999999999999999999887754
No 8
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=364.72 Aligned_cols=145 Identities=50% Similarity=0.674 Sum_probs=121.0
Q ss_pred CCCCCCccceeEEEEEEEeecCCC---cceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhh
Q 002212 1 MNRASSRSHSVFTCIIESKWESQG---VTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSI 77 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g---~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~ 77 (953)
||..|||||+||+|+|.+.....+ ......|+|+|||||||||..++++.|.|++|+++||+||++||+||.+|++.
T Consensus 195 ~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~ 274 (349)
T 1t5c_A 195 MNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDG 274 (349)
T ss_dssp SSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHHHHHHHHHHHHhcc
Confidence 899999999999999998765432 22456799999999999999999999999999999999999999999999863
Q ss_pred cCCCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCchhH
Q 002212 78 SNGKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASGDV 149 (953)
Q Consensus 78 s~gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~dv 149 (953)
+ ...||||||||||+||+|||||||+|+|||||||+ +++||++||+||+||+.|+|.|++|+++....
T Consensus 275 ~--~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~~ 342 (349)
T 1t5c_A 275 Q--VGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDEL 342 (349)
T ss_dssp C--CTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC----
T ss_pred C--CCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHhhcccCceeccCCCCCC
Confidence 2 34699999999999999999999999999999997 58999999999999999999999999877653
No 9
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=4.4e-41 Score=365.85 Aligned_cols=143 Identities=52% Similarity=0.764 Sum_probs=112.7
Q ss_pred CCCCCCccceeEEEEEEEeecCC--CcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhc
Q 002212 1 MNRASSRSHSVFTCIIESKWESQ--GVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSIS 78 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~--g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s 78 (953)
||..|||||+||||+|.+..... +......|+|+|||||||||.+++++.|.|++|+++||+||++||+||.+|++..
T Consensus 210 ~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~ 289 (366)
T 2zfi_A 210 MNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMD 289 (366)
T ss_dssp TTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCCCccccccCCCccchhhhhhHhHHHHHHHHHHHHHHhcc
Confidence 89999999999999999865433 3344567999999999999999999999999999999999999999999998743
Q ss_pred C--------CCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcccccccccc
Q 002212 79 N--------GKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNE 143 (953)
Q Consensus 79 ~--------gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNe 143 (953)
. ++..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+||+.|+|.|++|.
T Consensus 290 ~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~~ 362 (366)
T 2zfi_A 290 SGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVNH 362 (366)
T ss_dssp --------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC----------
T ss_pred cccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCCCCCCC
Confidence 2 2467999999999999999999999999999999999999999999999999999999999885
No 10
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=5.3e-41 Score=373.28 Aligned_cols=141 Identities=55% Similarity=0.744 Sum_probs=109.6
Q ss_pred CCCCCCccceeEEEEEEEeecC--CCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhc
Q 002212 1 MNRASSRSHSVFTCIIESKWES--QGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSIS 78 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~--~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s 78 (953)
||..|||||+||||+|.+.... .+....+.|+|+|||||||||..++++.|.|++||++||+||++||+||.+|++..
T Consensus 261 ~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~ 340 (443)
T 2owm_A 261 MNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPK 340 (443)
T ss_dssp SSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC--
T ss_pred CCCccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECCCCccccccCCccccccchhhhcHHHHHHHHHHHHHhccc
Confidence 8999999999999999886432 23344567999999999999999999999999999999999999999999997533
Q ss_pred CC------------------CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccc
Q 002212 79 NG------------------KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAI 140 (953)
Q Consensus 79 ~g------------------k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpv 140 (953)
.+ +..|||||||||||||+|+|||||+|+|||||||+ +|+||++||+||+||+.|+|+|+
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~ 418 (443)
T 2owm_A 341 SSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAV 418 (443)
T ss_dssp -----------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCC
T ss_pred ccccccccccccccccccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cHHHHHHHHHHHHHHhhccccce
Confidence 21 23599999999999999999999999999999997 59999999999999999999999
Q ss_pred ccc
Q 002212 141 VNE 143 (953)
Q Consensus 141 VNe 143 (953)
+|+
T Consensus 419 vN~ 421 (443)
T 2owm_A 419 VNQ 421 (443)
T ss_dssp CCC
T ss_pred ecc
Confidence 998
No 11
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=2.5e-41 Score=368.75 Aligned_cols=142 Identities=53% Similarity=0.724 Sum_probs=112.1
Q ss_pred CCCCCCccceeEEEEEEEeecC-CCcceeeeeeEEEEecCCCCCcCCCCcc-hhhhhHhhhhhhchhHHHHHHHHHHhhc
Q 002212 1 MNRASSRSHSVFTCIIESKWES-QGVTHHRFARLNLVDLAGSERQKSSGAE-GERLKEATNINKSLSTLGLVIMNLVSIS 78 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~-~g~~~~r~SKL~LVDLAGSER~~kTgAe-GeRLKEA~nINKSLsALG~VI~ALss~s 78 (953)
||..|||||+||+|+|.+.... .+....+.|+|+|||||||||..++++. |.|++|+.+||+||++||+||.+|++
T Consensus 229 ~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~-- 306 (373)
T 2wbe_C 229 MNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVD-- 306 (373)
T ss_dssp HHHHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHH--
T ss_pred CCCCCCCccEEEEEEEEEecCCCCCCcceeEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHHHHHHHHc--
Confidence 6899999999999999876432 3334456799999999999999999987 99999999999999999999999986
Q ss_pred CCCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCc
Q 002212 79 NGKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDAS 146 (953)
Q Consensus 79 ~gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s 146 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+|||.|+|+|++|++.+
T Consensus 307 --~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~~s 372 (373)
T 2wbe_C 307 --RAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLT 372 (373)
T ss_dssp --CSSCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEECC
T ss_pred --CCCcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccccceeccccC
Confidence 456999999999999999999999999999999999999999999999999999999999998654
No 12
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=6.4e-40 Score=354.65 Aligned_cols=136 Identities=49% Similarity=0.621 Sum_probs=115.8
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.+...+. ...|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|++.. +
T Consensus 213 ~N~~SSRSH~if~i~v~~~~~~~~~--~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~-~ 289 (349)
T 3t0q_A 213 SNERSSRSHSVFMVHINGRNLHTGE--TSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPD-A 289 (349)
T ss_dssp --CTGGGSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTT-G
T ss_pred cccccCCcceEEEEEEEEEecCCCC--eeEEEEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHHHHHHHhccc-C
Confidence 7999999999999999998765543 356999999999999999999999999999999999999999999997532 2
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcccccc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNA 139 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkp 139 (953)
+..||||||||||+||||||||||+|+|||||||+..+++||++||+||+|++.|+..+
T Consensus 290 ~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 290 GKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp GGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred CCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhhcccCC
Confidence 34699999999999999999999999999999999999999999999999999998764
No 13
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=5.3e-40 Score=355.22 Aligned_cols=136 Identities=48% Similarity=0.644 Sum_probs=120.5
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.+...+ ....|+|+|||||||||..++++.|.|++|+++||+||++||+||.+|+... +
T Consensus 210 ~N~~SSRSH~if~i~v~~~~~~~~--~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~-~ 286 (347)
T 1f9v_A 210 SNEHSSASHSIFIIHLSGSNAKTG--AHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPD-S 286 (347)
T ss_dssp --CCGGGSEEEEEEEEEEECC--C--CEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC--
T ss_pred CCCCCCCceEEEEEEEEEecCCCC--ceeeeEEEEEECCCCccccccccchhhhHHHHHHhHHHHHHHHHHHHHhccc-C
Confidence 799999999999999998755443 3467999999999999999999999999999999999999999999997522 2
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcccccc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNA 139 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkp 139 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+|++.|+..+
T Consensus 287 ~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~~~ 345 (347)
T 1f9v_A 287 TKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVS 345 (347)
T ss_dssp --CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTTC-
T ss_pred CCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhhccCC
Confidence 34799999999999999999999999999999999999999999999999999999876
No 14
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=5.5e-40 Score=356.00 Aligned_cols=134 Identities=52% Similarity=0.724 Sum_probs=98.4
Q ss_pred CCCCCCccceeEEEEEEEeecCCC-cceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQG-VTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISN 79 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g-~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~ 79 (953)
||..|||||+||+|+|.+.....+ ....+.|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|++..
T Consensus 221 ~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~- 299 (355)
T 3lre_A 221 MNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSK- 299 (355)
T ss_dssp --CBCTTCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC----
T ss_pred CcCCCCCCcEEEEEEEEEecCCCCCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 799999999999999998765432 334567999999999999999999999999999999999999999999997532
Q ss_pred CCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcc
Q 002212 80 GKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFI 135 (953)
Q Consensus 80 gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~I 135 (953)
++..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+|||.|
T Consensus 300 ~~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 300 RKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp -----CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred CCCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 24569999999999999999999999999999999999999999999999999976
No 15
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=357.82 Aligned_cols=132 Identities=48% Similarity=0.652 Sum_probs=100.1
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.....+......|+|+|||||||||.+++++.|.|++|+.+||+||++||+||.+|++ +
T Consensus 228 ~N~~SSRSH~if~i~i~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~---~ 304 (359)
T 3nwn_A 228 MNKNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGD---Q 304 (359)
T ss_dssp HTCCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC----
T ss_pred CccccCcceEEEEEEEEeecccccCcccccccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHHHHHHHh---c
Confidence 7999999999999999887655554556779999999999999999999999999999999999999999999974 4
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFI 135 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~I 135 (953)
+..||||||||||+||||||||||+|+|||||||+..+++||++||+||+|||.|
T Consensus 305 ~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 305 KRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp ----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred CCCcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence 5679999999999999999999999999999999999999999999999999986
No 16
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=1.4e-39 Score=353.65 Aligned_cols=138 Identities=35% Similarity=0.532 Sum_probs=115.3
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcch-hhhhHhhhhhhchhHHHHHHHHHHhhcC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEG-ERLKEATNINKSLSTLGLVIMNLVSISN 79 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeG-eRLKEA~nINKSLsALG~VI~ALss~s~ 79 (953)
||..|||||+||+|+|.+.. .....|+|+|||||||||..++++.| .+++|+++||+||++||+||.+|..
T Consensus 205 ~N~~SSRSH~if~i~v~~~~-----~~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~--- 276 (360)
T 1ry6_A 205 QNDESSRSHAILNIDLKDIN-----KNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDS--- 276 (360)
T ss_dssp CTTGGGGSEEEEEEEEEETT-----TTEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccCCCccceEEEEEEEEecc-----CCcceeEEEEEECCCCccccccccccccchHHHHHHHHHHHHHHHHHHHHhc---
Confidence 89999999999999998742 12456999999999999999998876 5789999999999999999999963
Q ss_pred CCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccccccCCch
Q 002212 80 GKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAIVNEDASG 147 (953)
Q Consensus 80 gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvVNed~s~ 147 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+|||.|+|.|+.|.+...
T Consensus 277 -~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~i~n~~~~~~~~~n 343 (360)
T 1ry6_A 277 -DKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYSSRVKNKGNSKLEGKPIPN 343 (360)
T ss_dssp -STTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC-------------
T ss_pred -CCCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccCcccCCCCcc
Confidence 4579999999999999999999999999999999999999999999999999999998777765444
No 17
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=7.8e-40 Score=355.45 Aligned_cols=132 Identities=48% Similarity=0.652 Sum_probs=99.7
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.....+......|+|+|||||||||.+++++.|.|++|+.+||+||++||+||.+|++ +
T Consensus 227 ~N~~SSRSH~If~i~v~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~---~ 303 (358)
T 2nr8_A 227 MNKNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGD---Q 303 (358)
T ss_dssp HTCCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC----
T ss_pred CCCCCCcCeEEEEEEEEEEeccCCCCCEEEEEEEEEECCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHHHh---C
Confidence 7999999999999999987544444445679999999999999999999999999999999999999999999974 4
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFI 135 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~I 135 (953)
+..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||.|
T Consensus 304 ~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 304 KRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp ----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred CCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 5579999999999999999999999999999999999999999999999999976
No 18
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=2.2e-39 Score=351.23 Aligned_cols=134 Identities=55% Similarity=0.782 Sum_probs=111.0
Q ss_pred CCCCCCccceeEEEEEEEeec--CCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhc
Q 002212 1 MNRASSRSHSVFTCIIESKWE--SQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSIS 78 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~--~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s 78 (953)
||..|||||+||+|+|.+... ..+......|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|++.+
T Consensus 212 ~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~ 291 (354)
T 3gbj_A 212 MNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQS 291 (354)
T ss_dssp ----CTTSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCcccEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHHHHHHHhhh
Confidence 799999999999999987643 334455678999999999999999999999999999999999999999999998754
Q ss_pred C--CCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhc
Q 002212 79 N--GKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKF 134 (953)
Q Consensus 79 ~--gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~ 134 (953)
. ++..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||.||+.
T Consensus 292 ~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 292 AGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKH 349 (354)
T ss_dssp -----CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred cccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence 3 3567999999999999999999999999999999999999999999999999985
No 19
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=347.15 Aligned_cols=130 Identities=52% Similarity=0.729 Sum_probs=113.6
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.....+ ....|+|+|||||||||.+++++.|.|++|+++||+||++||+||.+|+.
T Consensus 200 ~N~~SSRSH~if~i~v~~~~~~~~--~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~---- 273 (330)
T 2h58_A 200 LNEHSSRSHALLIVTVRGVDCSTG--LRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRS---- 273 (330)
T ss_dssp SCSCGGGSEEEEEEEEEEEETTTT--EEEEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred CCCCcCCccEEEEEEEEEEecCCC--cEEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhHhHHHHHHHHHHHhc----
Confidence 799999999999999998765544 34679999999999999999999999999999999999999999999974
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIK 136 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IK 136 (953)
+..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+||+.|+
T Consensus 274 ~~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~i~ 329 (330)
T 2h58_A 274 RQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE 329 (330)
T ss_dssp TCSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred CCCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence 45799999999999999999999999999999999999999999999999999986
No 20
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-39 Score=356.99 Aligned_cols=137 Identities=48% Similarity=0.651 Sum_probs=122.0
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.+...+. ...|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|+... +
T Consensus 266 ~N~~SSRSH~if~i~v~~~~~~~~~--~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~-~ 342 (403)
T 4etp_A 266 SNEHSSRSHSIFIIHLSGSNAKTGA--HSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPD-S 342 (403)
T ss_dssp HHHHHHTSEEEEEEEEEEEETTTCC--EEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSC-T
T ss_pred CCcccCCcccEEEEEEEEeecCCCC--eeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhccc-C
Confidence 6889999999999999988765543 356999999999999999999999999999999999999999999997532 3
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAI 140 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpv 140 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+|++.|+..|.
T Consensus 343 ~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 343 TKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp TTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred CCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhcccCCC
Confidence 346999999999999999999999999999999999999999999999999999988763
No 21
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=2.9e-39 Score=348.75 Aligned_cols=132 Identities=49% Similarity=0.691 Sum_probs=102.6
Q ss_pred CCCCCCccceeEEEEEEEeecCC------CcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHH
Q 002212 1 MNRASSRSHSVFTCIIESKWESQ------GVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNL 74 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~------g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~AL 74 (953)
||..|||||+||+|+|.+.+... +.....+|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|
T Consensus 207 ~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL 286 (344)
T 4a14_A 207 LNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISAL 286 (344)
T ss_dssp --CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC--------------CCCSHHHHHHHHHHHH
T ss_pred hhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhcccCCchhhhhhheeechhHHhhhhHHHhc
Confidence 79999999999999999865321 223456799999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhh
Q 002212 75 VSISNGKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAK 133 (953)
Q Consensus 75 ss~s~gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK 133 (953)
++. .++..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+|||
T Consensus 287 ~~~-~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 287 GDP-QRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp TCT-TTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred CCc-cccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCccchhHHhhhhhhhhhcC
Confidence 752 2345799999999999999999999999999999999999999999999999996
No 22
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=1.6e-39 Score=348.85 Aligned_cols=129 Identities=55% Similarity=0.674 Sum_probs=120.2
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.....+ ....|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|++
T Consensus 197 ~N~~SSRSH~if~i~v~~~~~~~~--~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~---- 270 (325)
T 1bg2_A 197 MNEHSSRSHSIFLINVKQENTQTE--QKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAE---- 270 (325)
T ss_dssp HHHHHHHSEEEEEEEEEEEETTTC--CEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHT----
T ss_pred CCCCCCCCeEEEEEEEEEEecCCC--cEEEEEEEEEECCCCCcccccCCccccchHHHHHHHHHHHHHHHHHHHHc----
Confidence 688999999999999998765443 34569999999999999999999999999999999999999999999975
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFI 135 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~I 135 (953)
+..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+|||.|
T Consensus 271 ~~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak~I 325 (325)
T 1bg2_A 271 GSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 325 (325)
T ss_dssp TCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred CCCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhccC
Confidence 3569999999999999999999999999999999999999999999999999986
No 23
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=348.46 Aligned_cols=129 Identities=53% Similarity=0.724 Sum_probs=96.6
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcch----hhhhHhhhhhhchhHHHHHHHHHHh
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEG----ERLKEATNINKSLSTLGLVIMNLVS 76 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeG----eRLKEA~nINKSLsALG~VI~ALss 76 (953)
||..|||||+||+|+|.+.+...+. ...|+|+|||||||||.+++++.| .|++|+.+||+||++||+||.+|++
T Consensus 244 ~N~~SSRSH~Ifti~v~~~~~~~~~--~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~ 321 (376)
T 2rep_A 244 QNERSSRSHSVFQLQISGEHSSRGL--QCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSN 321 (376)
T ss_dssp ---CGGGSEEEEEEEEEEEESSSCC--EEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHT
T ss_pred CCCCCCCceEEEEEEEEEEecCCCc--EEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHHHHHHHHHHhc
Confidence 8999999999999999987655443 456999999999999999999999 9999999999999999999999974
Q ss_pred hcCCCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcc
Q 002212 77 ISNGKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFI 135 (953)
Q Consensus 77 ~s~gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~I 135 (953)
+..||||||||||+||||||||||+|+|||||||+..+++||++||+||+|++.+
T Consensus 322 ----~~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 322 ----KESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp ----TCSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred ----CCCccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 4579999999999999999999999999999999999999999999999999853
No 24
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=1.5e-38 Score=343.93 Aligned_cols=127 Identities=43% Similarity=0.578 Sum_probs=101.0
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||||+|.+. ...|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|+.
T Consensus 213 ~N~~SSRSH~Ifti~v~~~--------~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~---- 280 (344)
T 3dc4_A 213 MNSNSSRSHAIVTIHVKSK--------THHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAA---- 280 (344)
T ss_dssp -----CCEEEEEEEEEECS--------SCEEEEEEEECCCCCCC-------------CCSCCHHHHHHHHHHHHHT----
T ss_pred CCCCCCCceEEEEEEEEec--------CcEEEEEEEECCCCccccccccccchhHHHHHHhHhHHHHHHHHHHHhc----
Confidence 7999999999999999753 2459999999999999999999999999999999999999999999974
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcccccc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNA 139 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkp 139 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+||+.....|
T Consensus 281 ~~~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~~~~ 339 (344)
T 3dc4_A 281 GHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKAAALEH 339 (344)
T ss_dssp TCSSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHHHHHHHhhcCCCC
Confidence 35699999999999999999999999999999999999999999999999999876554
No 25
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=4.4e-38 Score=364.49 Aligned_cols=131 Identities=50% Similarity=0.673 Sum_probs=109.1
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||.+|||||+||+|+|.+.....+ ..++|+|+|||||||||.+++++.|.|++|+++||+||++||+||.+|+. +
T Consensus 582 ~n~~ssRSH~i~~i~~~~~~~~~~--~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~---~ 656 (715)
T 4h1g_A 582 SNDHSSRSHSIFIIDLQGYNSLTK--ESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNL---K 656 (715)
T ss_dssp ---CGGGSEEEEEEEEEEEETTTC--CEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHH---C
T ss_pred ccCccccccEEEEEEEEEEecCCC--CEeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhh---c
Confidence 799999999999999998765443 34679999999999999999999999999999999999999999999974 3
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIK 136 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IK 136 (953)
+..|||||||||||||+|||||||+|+|||||||+..+++||++||+||+|||.|+
T Consensus 657 ~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 657 DGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp SCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred CCCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence 45799999999999999999999999999999999999999999999999999986
No 26
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=1.5e-37 Score=340.74 Aligned_cols=127 Identities=42% Similarity=0.579 Sum_probs=99.6
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCC-cchhhhhHhhhhhhchhHHHHHHHHHHhhcC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSG-AEGERLKEATNINKSLSTLGLVIMNLVSISN 79 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTg-AeGeRLKEA~nINKSLsALG~VI~ALss~s~ 79 (953)
||..|||||+||+|+|.+. ....|+|+|||||||||..+++ +.|.+++|+++||+||++||+||.+|+.
T Consensus 257 ~N~~SSRSH~Ifti~v~~~-------~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~--- 326 (387)
T 2heh_A 257 ANSNSSRSHACFQIILRAK-------GRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQ--- 326 (387)
T ss_dssp ---CGGGSEEEEEEEEESS-------SSEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHT---
T ss_pred CcCCcccceEEEEEEEEEC-------CeeeeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHHHHHHHhc---
Confidence 7999999999999999864 1256999999999999998886 5678899999999999999999999974
Q ss_pred CCCCCcCCCCchhhhhhhhc-cCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccc
Q 002212 80 GKSLHVPYRDSKLTFLLQDS-LGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNN 138 (953)
Q Consensus 80 gk~~HVPYRDSKLTrLLQDS-LGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNk 138 (953)
+..||||||||||+||||| |||||+|+|||||||+..+++||++||+||+|||.|++.
T Consensus 327 -~~~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 327 -NKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp -TCSCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred -CCCCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence 4579999999999999999 599999999999999999999999999999999999875
No 27
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=1.6e-37 Score=342.68 Aligned_cols=129 Identities=40% Similarity=0.551 Sum_probs=99.4
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCC-cchhhhhHhhhhhhchhHHHHHHHHHHhhcC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSG-AEGERLKEATNINKSLSTLGLVIMNLVSISN 79 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTg-AeGeRLKEA~nINKSLsALG~VI~ALss~s~ 79 (953)
||..|||||+||+|+|.+.. ...|+|+|||||||||..+++ +.|.+++|+++||+||++||+||.+|+.
T Consensus 277 ~N~~SSRSH~Ifti~v~~~~-------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~--- 346 (410)
T 1v8k_A 277 ANSNSSRSHACFQILLRTKG-------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQ--- 346 (410)
T ss_dssp ---CCCSSEEEEEEEEESSS-------SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC---
T ss_pred CCCCCCCceEEEEEEEEeCC-------cceeEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHHHHHHHhc---
Confidence 79999999999999998641 256999999999999998886 5678899999999999999999999963
Q ss_pred CCCCCcCCCCchhhhhhhhc-cCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccc
Q 002212 80 GKSLHVPYRDSKLTFLLQDS-LGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAI 140 (953)
Q Consensus 80 gk~~HVPYRDSKLTrLLQDS-LGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpv 140 (953)
+..||||||||||+||+|| |||||+|+|||||||+..+++||++||+||+||+.|...|-
T Consensus 347 -~~~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 347 -NKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp -------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred -CCCCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccHHHHHHHHHHHHHhccCCCCCC
Confidence 4579999999999999999 59999999999999999999999999999999999987763
No 28
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=3e-37 Score=340.64 Aligned_cols=129 Identities=44% Similarity=0.604 Sum_probs=108.9
Q ss_pred CCCCCCccceeEEEEEEEeecCCCcceeeeeeEEEEecCCCCCcCCCCcchhhhhHhhhhhhchhHHHHHHHHHHhhcCC
Q 002212 1 MNRASSRSHSVFTCIIESKWESQGVTHHRFARLNLVDLAGSERQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSISNG 80 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ieqk~~~~g~~~~r~SKL~LVDLAGSER~~kTgAeGeRLKEA~nINKSLsALG~VI~ALss~s~g 80 (953)
||..|||||+||+|+|.+.+...+ ...+|+|+|||||||||.. .|.|++|+++||+||++||+||.+|+.
T Consensus 258 ~N~~SSRSH~if~i~v~~~~~~~~--~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~---- 327 (412)
T 3u06_A 258 GNERSSRSHAVTKLELIGRHAEKQ--EISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQ---- 327 (412)
T ss_dssp CHHHHTTCEEEEEEEEEEEETTTT--EEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHT----
T ss_pred CCCCCcCceEEEEEEEEEEeCCCC--CEEEEEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHHHHHHHHhc----
Confidence 799999999999999998765544 3467999999999999874 468999999999999999999999974
Q ss_pred CCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhcccccc
Q 002212 81 KSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNA 139 (953)
Q Consensus 81 k~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkp 139 (953)
+..||||||||||+||+|||||||+|+|||||||+..+++||++||+||+|++.|+..+
T Consensus 328 ~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~ 386 (412)
T 3u06_A 328 KQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTK 386 (412)
T ss_dssp TCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC--
T ss_pred cCCCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHHhhccccc
Confidence 45799999999999999999999999999999999999999999999999999998554
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.95 E-value=1.1e-29 Score=233.45 Aligned_cols=99 Identities=53% Similarity=0.643 Sum_probs=89.1
Q ss_pred hhhhhhchhHHHHHHHHHHhhcCCCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccc
Q 002212 57 ATNINKSLSTLGLVIMNLVSISNGKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIK 136 (953)
Q Consensus 57 A~nINKSLsALG~VI~ALss~s~gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IK 136 (953)
|++||+||++||+||.+|+. ++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||+.|+
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~---~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~ 77 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAE---GTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIK 77 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHH---TCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCE
T ss_pred CCcchHHHHHHHHHHHHHHh---cCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhcc
Confidence 46899999999999999975 345799999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHH
Q 002212 137 NNAIVNEDASGDVIAMRMEIQQLKKEV 163 (953)
Q Consensus 137 NkpvVNed~s~dv~~Lr~eIq~LK~EL 163 (953)
|.|++|.++..+.. ++.++.|+
T Consensus 78 ~~~~~n~~~~~~~l-----~~~~~~e~ 99 (100)
T 2kin_B 78 NTVSVNLELTAEEW-----KKKYEKEK 99 (100)
T ss_dssp EEECCEEECCHHHH-----HHHHHHHH
T ss_pred CcceeccCCCHHHH-----HHHHHHhh
Confidence 99999998887643 44555554
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.95 E-value=1.5e-28 Score=230.99 Aligned_cols=104 Identities=53% Similarity=0.677 Sum_probs=90.2
Q ss_pred hhchhHHHHHHHHHHhhcCCCCCCcCCCCchhhhhhhhccCCCcceeEEeecCCCCcchhhhhhHhhhHHHhhccccccc
Q 002212 61 NKSLSTLGLVIMNLVSISNGKSLHVPYRDSKLTFLLQDSLGGNSKTIIIANISPSSCCSLETLSTLKFAQRAKFIKNNAI 140 (953)
Q Consensus 61 NKSLsALG~VI~ALss~s~gk~~HVPYRDSKLTrLLQDSLGGNSKT~mIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpv 140 (953)
|+||++||+||.+|++ ++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||+.|+|.|+
T Consensus 1 N~SL~~Lg~vi~aL~~---~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~ 77 (117)
T 3kin_B 1 NKSLSALGNVISALAE---GTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVS 77 (117)
T ss_dssp CCHHHHHHHHHHHHHH---SCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHHHHh---CCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCce
Confidence 8999999999999976 4457999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhHH------------HHHHHHHHHHHHHHHHH
Q 002212 141 VNEDASGDVI------------AMRMEIQQLKKEVSRLR 167 (953)
Q Consensus 141 VNed~s~dv~------------~Lr~eIq~LK~ELsrLR 167 (953)
+|.++....+ .++..|..|+.|+.++|
T Consensus 78 ~n~~~~~~~l~~~~~~e~~~~~~L~~~i~~Le~el~~~R 116 (117)
T 3kin_B 78 VNLELTAEEWKKKYEKEKEKNKALKSVIQHLEVELNRWR 116 (117)
T ss_dssp CCBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998876532 23444555555555554
No 31
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=96.54 E-value=0.64 Score=45.12 Aligned_cols=45 Identities=18% Similarity=0.154 Sum_probs=20.5
Q ss_pred hHhhhhhhhHhhhhhHHHHHHhhhhhhHHhhHHHHhHHHHHhHHH
Q 002212 625 EVDKLSGDIVAMEDSIQAKQQQCGSLKHLCSEMQERKALVDNKLM 669 (953)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~ 669 (953)
..+++..++..+...+......+..++..+........-+...+.
T Consensus 21 ~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (284)
T 1c1g_A 21 RADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALK 65 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444444444444444444444444443
No 32
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.47 E-value=0.032 Score=69.16 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhHHHHHH
Q 002212 889 RIVEEELQLELRRMDELRVL 908 (953)
Q Consensus 889 ~~~~e~l~~~~~~~~~~~~~ 908 (953)
..+.+++..-..+++++...
T Consensus 1147 ~~L~~ele~L~~~Ieel~~v 1166 (1184)
T 1i84_S 1147 RDLSEELEALKTELEDTLDT 1166 (1184)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHHHHHHHhhH
Confidence 34445554445556666655
No 33
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=94.98 E-value=0.061 Score=66.77 Aligned_cols=17 Identities=24% Similarity=0.149 Sum_probs=12.1
Q ss_pred CCCCCCccceeEEEEEE
Q 002212 1 MNRASSRSHSVFTCIIE 17 (953)
Q Consensus 1 MN~~SSRSHAIFTI~Ie 17 (953)
.|..|||-=-++.|++.
T Consensus 240 rN~NSSRfgk~~~i~f~ 256 (1184)
T 1i84_S 240 KNDNSSRFGKFIRINFD 256 (1184)
T ss_dssp TEEEEECSCEEEEEEEC
T ss_pred CCccccccceeEEEEEC
Confidence 37778887777777664
No 34
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=87.48 E-value=18 Score=37.59 Aligned_cols=52 Identities=19% Similarity=0.151 Sum_probs=27.3
Q ss_pred HHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCchhhhhh
Q 002212 356 LRMQAIHNQAEMETLRKQLEFSLDEKEKLERHVSDLVKKLEEQTCPISAKEE 407 (953)
Q Consensus 356 Lr~~~~~~~~El~~~~k~l~~clEen~kl~r~i~~L~~el~~~~~~~~~~~~ 407 (953)
|+.++.....++..+...+..-..+...+.+.+..+..++...+......+.
T Consensus 30 lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~ 81 (256)
T 3na7_A 30 KRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQK 81 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555555555555555555555555555555555554444433
No 35
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=76.25 E-value=5 Score=39.37 Aligned_cols=139 Identities=19% Similarity=0.230 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhHHHHhhhHhhhhhhhHhhhhhHHHHHHhhhhhhHHhhHHHHhHHHHHhHHHhhhhh
Q 002212 595 VRLKLEKAQEKLSDSANTITLFGSVEKAFAEVDKLSGDIVAMEDSIQAKQQQCGSLKHLCSEMQERKALVDNKLMALKYS 674 (953)
Q Consensus 595 ~~~k~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~ 674 (953)
+-..|++++++|.++ ..-|+.|.-.+|+--|-..+.+..-...-..+..|...+.++...-.=.|.||.-.
T Consensus 8 lEeeLer~eerl~~a------~~kLeeaek~adE~eR~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~--- 78 (147)
T 2b9c_A 8 VEEELDRAQERLATA------LQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEV--- 78 (147)
T ss_dssp ---CCGGGGTTTTHH------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHH---
Confidence 334456666666665 34467777777888888888888888888888888888888877777777776321
Q ss_pred cccccchhhHHHHHHHhhhhccccchhhhhhhHhhhHhHhHhhHHHHHHhhhhhhhHHHHHHhHHHHHhHhH
Q 002212 675 LSSFSSSAAYFEQRAARSRARVTTSSTYLNQKKEQLVHLECCKREIEDALGKVQRSEAELRNNLALLKSKLE 746 (953)
Q Consensus 675 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l~~~k~~~~~~~~~~~~~e~e~~~~~~~~k~k~~ 746 (953)
+--....+..=.+|..|..++-+.+..-.++|..+-..-+-++++-.++.+-|......|..|..+|.
T Consensus 79 ----~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~nlKsLE~~eekas~rE~~yee~I~~L~~kLk 146 (147)
T 2b9c_A 79 ----ARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEDKVEELLSKNYHLENEVARLKKLVG 146 (147)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11122344445567777777777777777787777777777888888888888888888877766653
No 36
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=75.15 E-value=1.5e+02 Score=41.61 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=49.0
Q ss_pred HHHHHHHHhhhhhhhhccHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHhhhHHH
Q 002212 460 RLELEVLNKEKSEFNKLNDELQLKHKVLIEEKSNLIELYERKEMEMKREAENLELQLAEMNEENEKLLGLYEKAMQERDE 539 (953)
Q Consensus 460 ~~~~e~~~~~~~e~~~ln~e~~~~~~~l~e~~~~l~~~~~~~~~~~~~~~~~L~~ql~e~~~en~kl~~lye~am~e~d~ 539 (953)
..|.-+..++..|....-+-+..=|.-|-+. ...|.+|+..+.+++.+|.+...+.+++|.--.+.+++=++
T Consensus 1902 ~~y~~ll~~K~~el~~~~~rl~~GL~KL~et--------~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~ 1973 (3245)
T 3vkg_A 1902 NQVVLLINEKRDQLEEEQLHLNIGLKKLRDT--------EAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEI 1973 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445566555555444444444433333 23588899999999999999999999999777766666544
Q ss_pred HH
Q 002212 540 FK 541 (953)
Q Consensus 540 ~~ 541 (953)
-|
T Consensus 1974 ~k 1975 (3245)
T 3vkg_A 1974 KQ 1975 (3245)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 37
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=71.56 E-value=67 Score=44.69 Aligned_cols=105 Identities=10% Similarity=0.136 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHhhhHHHHHHHHhhhcCCccccccccccccchhhccccccccccch
Q 002212 499 ERKEMEMKREAENLELQLAEMNEENEKLLGLYEKAMQERDEFKRMISLCGQNRAEASGEIYCPEKLVEIDGEAAFADMET 578 (953)
Q Consensus 499 ~~~~~~~~~~~~~L~~ql~e~~~en~kl~~lye~am~e~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (953)
+.+....+..+...+.+|.++.+.=.+|..=|+.|+.|+..++..+..+.. .+..-++|+.-=|+|
T Consensus 2020 e~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~-------kl~rA~~Li~gL~~E------- 2085 (3245)
T 3vkg_A 2020 ENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKN-------KVDRSIALLDNLNSE------- 2085 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhhhhc-------
Confidence 334455556677777777777777777888889999999988887754322 233334444322222
Q ss_pred hhhchhhhhhhhhHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHh
Q 002212 579 EQLNLANIKVTEDLNLVRLKLEKAQEKLSDSANTITLFGSVEKAF 623 (953)
Q Consensus 579 ~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~~~~~~~e~~~ 623 (953)
-+.-++........+.++---..-|+-.|+|+|..-..+
T Consensus 2086 ------k~RW~~~~~~l~~~~~~L~GD~LLaaafisY~G~f~~~~ 2124 (3245)
T 3vkg_A 2086 ------RGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNF 2124 (3245)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCHHH
Confidence 122233333334445555445555666788888765544
No 38
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=70.81 E-value=15 Score=34.60 Aligned_cols=41 Identities=20% Similarity=0.335 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCchh
Q 002212 363 NQAEMETLRKQLEFSLDEKEKLERHVSDLVKKLEEQTCPIS 403 (953)
Q Consensus 363 ~~~El~~~~k~l~~clEen~kl~r~i~~L~~el~~~~~~~~ 403 (953)
...+|+++|+.+....-+|+++.-+++.++..+++.|...+
T Consensus 18 ye~~I~~LR~qid~~~~e~a~l~leldn~~~~~edfk~KyE 58 (119)
T 3ol1_A 18 YEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQ 58 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 45789999999999999999999999999999999876553
No 39
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=69.96 E-value=1.1e+02 Score=31.76 Aligned_cols=33 Identities=15% Similarity=0.304 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHH-HHHHhhHHHHH
Q 002212 501 KEMEMKREAENLELQLAEMNEE-NEKLLGLYEKA 533 (953)
Q Consensus 501 ~~~~~~~~~~~L~~ql~e~~~e-n~kl~~lye~a 533 (953)
.+.+.+..+..|..+..++-.. ...|+..|++.
T Consensus 151 ~~~e~~~e~~~l~~~r~~l~~~i~~~lL~~Yeri 184 (256)
T 3na7_A 151 EVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERI 184 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3344444444444444444333 45677777765
No 40
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=68.50 E-value=74 Score=30.08 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=52.8
Q ss_pred hhhhccHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHhhhHHHHHHHHhhhcCC
Q 002212 472 EFNKLNDELQLKHKVLIEEKSNLIELYERKEMEMKREAENLELQLAEMNEENEKLLGLYEKAMQERDEFKRMISLCGQN 550 (953)
Q Consensus 472 e~~~ln~e~~~~~~~l~e~~~~l~~~~~~~~~~~~~~~~~L~~ql~e~~~en~kl~~lye~am~e~d~~~r~~~~~~~~ 550 (953)
|.++|...|...-..+-+.......|-. .-.+++..+.+++-.+.+.-+.|..|+.-..++-++-++++.-|-....+
T Consensus 49 Ek~~L~~qL~~E~~~l~e~EE~~~~L~~-~k~eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~led~e~~ 126 (129)
T 2fxo_A 49 EKNDLQLQVQAEQDNLADAEERCDQLIK-NKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELT 126 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444433333333222222222 24578889999999999999999999999999999999999988664433
No 41
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=67.93 E-value=41 Score=42.07 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchh
Q 002212 379 DEKEKLERHVSDLVKKLEEQTCPIS 403 (953)
Q Consensus 379 Een~kl~r~i~~L~~el~~~~~~~~ 403 (953)
..+.+|+.+|.+|+..+++..+...
T Consensus 921 ~~~~~LE~kl~eLq~rL~~~e~~n~ 945 (1080)
T 2dfs_A 921 KLHIGLENKIMQLQRKIDEQNKEYK 945 (1080)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577777888888777766544443
No 42
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=65.41 E-value=6 Score=49.23 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhcc
Q 002212 351 EENEFLRMQAIHNQAEMETLRKQLEFSLDEKEKLERHVSDLVKKLEEQT 399 (953)
Q Consensus 351 ~Ene~Lr~~~~~~~~El~~~~k~l~~clEen~kl~r~i~~L~~el~~~~ 399 (953)
.|.+.+.-...+.+.+++ .+++.=..+|++|...+++|.....+..
T Consensus 1005 ke~~~lee~~~~~~~~L~---~kv~~L~~e~~~L~qq~~~l~~~~~~~~ 1050 (1080)
T 2dfs_A 1005 TEKKTIEEWADKYKHETE---QLVSELKEQNTLLKTEKEELNRRIHDQA 1050 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444 4444445688888888888875554443
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=64.07 E-value=35 Score=38.39 Aligned_cols=27 Identities=15% Similarity=0.343 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 002212 500 RKEMEMKREAENLELQLAEMNEENEKL 526 (953)
Q Consensus 500 ~~~~~~~~~~~~L~~ql~e~~~en~kl 526 (953)
++...+++++++-..++.++.+||.++
T Consensus 544 ~~~~~le~~~~~~~~~~~~l~~e~~~~ 570 (597)
T 3oja_B 544 QENIALEKQLDNKRAKQAELRQETSLK 570 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 445555555555555555555555554
No 44
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=63.75 E-value=18 Score=32.95 Aligned_cols=39 Identities=21% Similarity=0.326 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCc
Q 002212 363 NQAEMETLRKQLEFSLDEKEKLERHVSDLVKKLEEQTCP 401 (953)
Q Consensus 363 ~~~El~~~~k~l~~clEen~kl~r~i~~L~~el~~~~~~ 401 (953)
...+|.++|+.+....-+++++.-+|+.|..++..++..
T Consensus 54 ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~k~K 92 (93)
T 3s4r_A 54 YEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREK 92 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 568999999999999999999999999999999887654
No 45
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=58.65 E-value=46 Score=31.31 Aligned_cols=80 Identities=14% Similarity=0.236 Sum_probs=50.2
Q ss_pred HHHhhhHHHHHHHhhhhhhhHHHhhhhhhhhccchhhHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH
Q 002212 788 EEKTKLQTELKLCRERLGVVKREFEDLTKKSWKIDSDLQTVQMEIQKSSRSVEEMELAHQAVLQEQEALLEIREKGKTEI 867 (953)
Q Consensus 788 e~~~kl~~e~k~~~e~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~e~~~~~~~~~ 867 (953)
-++.+|+.|+...+.-+.-.+.-.++--.+...+|++|..+..++.....+..++|..++....|-.-|--+.+..+.++
T Consensus 34 ~e~a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~heeEl~eL 113 (119)
T 3ol1_A 34 NDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 113 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667777766666666555554444444466677788888878777777777777777766655544444444444443
No 46
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=56.35 E-value=25 Score=31.33 Aligned_cols=28 Identities=21% Similarity=0.455 Sum_probs=22.2
Q ss_pred hHHHhhhhhhhhccchhhHHHHHHHHHh
Q 002212 807 VKREFEDLTKKSWKIDSDLQTVQMEIQK 834 (953)
Q Consensus 807 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 834 (953)
-+||++.|-.+...++.+|..++..|-+
T Consensus 20 eqrEle~le~~Ie~LE~~i~~le~~lad 47 (89)
T 2lw1_A 20 LQRELEQLPQLLEDLEAKLEALQTQVAD 47 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678888888888888888888887755
No 47
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=53.67 E-value=47 Score=31.33 Aligned_cols=31 Identities=10% Similarity=0.212 Sum_probs=9.4
Q ss_pred HHHHHHhhhhhhhHHHhhhhhhhhccchhhH
Q 002212 795 TELKLCRERLGVVKREFEDLTKKSWKIDSDL 825 (953)
Q Consensus 795 ~e~k~~~e~l~~~~~e~~~~~~~~~~~~~~~ 825 (953)
.......+.|+..+-||..|++....++.+|
T Consensus 22 ~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el 52 (129)
T 3tnu_B 22 QTAGRHGDDLRNTKHEISEMNRMIQRLRAEI 52 (129)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555566666666655333333333
No 48
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=51.13 E-value=44 Score=31.66 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=6.8
Q ss_pred HHHHHHHhhhhhhhHHHhhhhhhhhccchhhH
Q 002212 794 QTELKLCRERLGVVKREFEDLTKKSWKIDSDL 825 (953)
Q Consensus 794 ~~e~k~~~e~l~~~~~e~~~~~~~~~~~~~~~ 825 (953)
+.......+.|+..+-||..|++....++.+|
T Consensus 23 ~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el 54 (131)
T 3tnu_A 23 NREVATNSELVQSGKSEISELRRTMQNLEIEL 54 (131)
T ss_dssp ------------------CHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455666666777777766433333333
No 49
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=48.29 E-value=2.2e+02 Score=28.32 Aligned_cols=72 Identities=21% Similarity=0.289 Sum_probs=59.3
Q ss_pred HHHHHHhhhhccccchhhhhhhHhhhHhHhHhhHHHHHHhhhhhhhHHHHHHhHHHHHhHhHH-Hhhhcccce
Q 002212 685 FEQRAARSRARVTTSSTYLNQKKEQLVHLECCKREIEDALGKVQRSEAELRNNLALLKSKLEE-ENRRQENEK 756 (953)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~k~~~l~~l~~~k~~~~~~~~~~~~~e~e~~~~~~~~k~k~~~-e~~~~e~e~ 756 (953)
.+..=.+|..|..++-+-+..-.++|...-..-+-++++-.+..+-|..+...|..|..||.+ +.|-...|+
T Consensus 26 ~E~dLEraEERae~aE~k~~eLEeeL~~v~~nlKsLE~seekasqrEd~yEeqIk~L~~kLKEAE~RAE~AER 98 (155)
T 2efr_A 26 LKKLLERAEERAELSEGKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAER 98 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777888888888888888888888877777789999999999999999999999999998 666655554
No 50
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=47.47 E-value=1.7e+02 Score=32.74 Aligned_cols=54 Identities=9% Similarity=-0.034 Sum_probs=38.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHhhhHHHHHHHHhh
Q 002212 493 NLIELYERKEMEMKREAENLELQLAEMNEENEKLLGLYEKAMQERDEFKRMISL 546 (953)
Q Consensus 493 ~l~~~~~~~~~~~~~~~~~L~~ql~e~~~en~kl~~lye~am~e~d~~~r~~~~ 546 (953)
+..+.+++.+...+.+.+.++..+.+..++-+..+.-|+..=+|++++++.+..
T Consensus 502 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~ 555 (597)
T 3oja_B 502 RSSDNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDN 555 (597)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhh
Confidence 444566666777777777777777777777777777777777777777777644
No 51
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=44.03 E-value=1e+02 Score=31.09 Aligned_cols=106 Identities=20% Similarity=0.204 Sum_probs=70.3
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhcccccCCCccccchhhHHHHHHHHHHHHhhhhHHH
Q 002212 365 AEMETLRKQLEFSLDEKEKLERHVSDLVKKLEEQTCPISAKEETQGFQLSTNVPTINFDDQVELKTMVDAIAVASQREAE 444 (953)
Q Consensus 365 ~El~~~~k~l~~clEen~kl~r~i~~L~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~e~kt~v~aia~asq~~~e 444 (953)
.|+.+.+..| ......|++++-.|+..|...|.......+.++ ++..-.-.-+.||+.+.+.+..|.=....
T Consensus 51 rELq~~~~~L---~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~-----elq~ri~~L~~El~~~k~~~~k~~~e~r~ 122 (168)
T 3o0z_A 51 RELQERNRIL---ENSKSQTDKDYYQLQAILEAERRDRGHDSEMIG-----DLQARITSLQEEVKHLKHNLEKVEGERKE 122 (168)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444333 356778899999999999999988877766551 11111122466888888888888888888
Q ss_pred hhhhhhhccccchhhHHHHHHHHhhhhhhhhccHHH
Q 002212 445 AHQTAIGLSKMHDELRLELEVLNKEKSEFNKLNDEL 480 (953)
Q Consensus 445 ~~~~~i~l~k~~~~~~~~~e~~~~~~~e~~~ln~e~ 480 (953)
++++-+.|.|++..+ +++++=+.++=++.+.+|.
T Consensus 123 L~Ekl~~lEKe~a~~--eid~~~eLKalQ~~~eqE~ 156 (168)
T 3o0z_A 123 AQDMLNHSEKEKNNL--EIDLNYKLKSLQQRLEQEV 156 (168)
T ss_dssp HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHH
Confidence 999999999984433 3334445555555555554
No 52
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=43.83 E-value=55 Score=31.73 Aligned_cols=64 Identities=16% Similarity=0.244 Sum_probs=39.1
Q ss_pred hhhhhccHHHHhhhHHHHHHHhhhhhhhHHHhhhhhhhhccchhhHHHHHHHHHhhhhhHHHHH
Q 002212 780 ATELLKSEEEKTKLQTELKLCRERLGVVKREFEDLTKKSWKIDSDLQTVQMEIQKSSRSVEEME 843 (953)
Q Consensus 780 a~~llk~ee~~~kl~~e~k~~~e~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 843 (953)
|.||++..++-..|..+++.-...+-.++.|+..+.-+...+..++..++.++...-+.+.++|
T Consensus 67 adEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 67 ADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688888888777777777665555555555555555555555555555555555554444443
No 53
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=41.39 E-value=62 Score=29.06 Aligned_cols=46 Identities=26% Similarity=0.438 Sum_probs=34.5
Q ss_pred hhhhhHhhhHhHhHh-------hHHHHHHhhhhhhhHHHHHHhHHHHHhHhHH
Q 002212 702 YLNQKKEQLVHLECC-------KREIEDALGKVQRSEAELRNNLALLKSKLEE 747 (953)
Q Consensus 702 ~~~~k~~~l~~l~~~-------k~~~~~~~~~~~~~e~e~~~~~~~~k~k~~~ 747 (953)
-++|..-+|..|..- +.-|+....++++-++++..||..||.|.+|
T Consensus 19 ~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~E 71 (78)
T 3iv1_A 19 EMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEE 71 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555444 4456777888889999999999999999887
No 54
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=38.91 E-value=1e+02 Score=27.89 Aligned_cols=62 Identities=24% Similarity=0.325 Sum_probs=34.2
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHhhhHhhhhhhhHhhhhhHHH-------HHHhhhhhhHHhhHHHHhHHHHHh
Q 002212 599 LEKAQEKLSDSANTITLFGSVEKAFAEVDKLSGDIVAMEDSIQA-------KQQQCGSLKHLCSEMQERKALVDN 666 (953)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~ 666 (953)
|+....||-.|++||+++.. ++++|-.+-.......+. ..++..-|+...+.-++|-..+=+
T Consensus 8 leqLE~KIq~avdtI~lLqm------EieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLg 76 (81)
T 2jee_A 8 FEKLEAKVQQAIDTITLLQM------EIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLG 76 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778899999999877642 344444444443333333 444444455555555554443333
No 55
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=33.62 E-value=1.9e+02 Score=26.27 Aligned_cols=64 Identities=14% Similarity=0.256 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHHhhhh---hhhhHHHHHHHHHHHHHHHhhHhhhccCCccccCCCCCCCcccchhhhHHHHHHHHh
Q 002212 286 HLLKEKEECLKEIESFYEGG---EREMMSQQIMVLQNKLLEALDWKLMHESDSSAVQEPGSPWRTSVNEENEFLRMQAIH 362 (953)
Q Consensus 286 ~Ll~Ene~L~eEIq~Lqeeg---ERE~lleeIs~Lqd~Lle~ld~k~~~e~~~v~~~~~~~~~~~s~~~Ene~Lr~~~~~ 362 (953)
+|-.+|..|.-+|..++..+ =..+...+|..|+.++..+.. |+-.|-+++.+
T Consensus 27 ~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~-------------------------ek~~l~~e~dn 81 (93)
T 3s4r_A 27 FLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTN-------------------------DKARVEVERDN 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHH
Confidence 34444555555555554222 223456667777777644333 34456667777
Q ss_pred hHHHHHHHHHHh
Q 002212 363 NQAEMETLRKQL 374 (953)
Q Consensus 363 ~~~El~~~~k~l 374 (953)
++.++..++++|
T Consensus 82 l~~~~~~~k~KL 93 (93)
T 3s4r_A 82 LAEDIMRLREKL 93 (93)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 778887777654
No 56
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=32.44 E-value=94 Score=29.75 Aligned_cols=57 Identities=19% Similarity=0.113 Sum_probs=37.1
Q ss_pred chhhhhhhHhhhHhHhHhhHHHHHHhhhhhhhHHHHHHhHHHHHhHhHHHhhhcccceeeEeecccc
Q 002212 699 SSTYLNQKKEQLVHLECCKREIEDALGKVQRSEAELRNNLALLKSKLEEENRRQENEKVLFAIDNIE 765 (953)
Q Consensus 699 ~~~~~~~k~~~l~~l~~~k~~~~~~~~~~~~~e~e~~~~~~~~k~k~~~e~~~~e~e~vl~~idn~~ 765 (953)
....+++-+.++.+|+.....+..|..++.+++.-+.. |..|+. ++-.|+|.+.+.-
T Consensus 14 l~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~-l~~l~~---------~~~~ilvplg~~~ 70 (151)
T 2zdi_C 14 LAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLEN-LKKIEE---------EKPEILVPIGAGS 70 (151)
T ss_dssp HHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCC---------SSCEEEEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccc---------CCceEEEEcCCCe
Confidence 34556677777888888888777777777665544422 333321 6778999988744
No 57
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=31.64 E-value=4.4e+02 Score=26.99 Aligned_cols=49 Identities=16% Similarity=0.193 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 002212 479 ELQLKHKVLIEEKSNLIELYERKEMEMKREAENLELQLAEMNEENEKLL 527 (953)
Q Consensus 479 e~~~~~~~l~e~~~~l~~~~~~~~~~~~~~~~~L~~ql~e~~~en~kl~ 527 (953)
.++.++.-.--...+.+..++..+..++.....|..++-++-..|+.|=
T Consensus 74 ~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlE 122 (189)
T 2v71_A 74 ALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLE 122 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3344444443344445555666666666667777777777777776664
No 58
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=31.13 E-value=34 Score=31.98 Aligned_cols=35 Identities=11% Similarity=0.379 Sum_probs=32.7
Q ss_pred HhhhhhhhHHHhhhhhhhhccchhhHHHHHHHHHh
Q 002212 800 CRERLGVVKREFEDLTKKSWKIDSDLQTVQMEIQK 834 (953)
Q Consensus 800 ~~e~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 834 (953)
+.|.+..++++|+.|.+-.+.+..++..++++++.
T Consensus 10 ~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 10 SREEADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999987
No 59
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=27.85 E-value=4.3e+02 Score=27.20 Aligned_cols=71 Identities=18% Similarity=0.252 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHhhhHHHHHHHHhhhcCCccccccccccccchhhccccccccccchhhh
Q 002212 502 EMEMKREAENLELQLAEMNEENEKLLGLYEKAMQERDEFKRMISLCGQNRAEASGEIYCPEKLVEIDGEAAFADMETEQL 581 (953)
Q Consensus 502 ~~~~~~~~~~L~~ql~e~~~en~kl~~lye~am~e~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (953)
...+..++..|..++..+.....+|..-||+.+..+.++=..|
T Consensus 134 ~~~~~~~~~~L~~e~~~l~~~~~~l~~qlE~~v~~K~~~E~~L------------------------------------- 176 (213)
T 1ik9_A 134 IAENQAKNEHLQKENERLLRDWNDVQGRFEKAVSAKEALETDL------------------------------------- 176 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------
Confidence 3455666777777778888888888888888888888876665
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHhhhhhhh
Q 002212 582 NLANIKVTEDLNLVRLKLEKAQEKLSDSANT 612 (953)
Q Consensus 582 ~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~ 612 (953)
..+|.-+||-=+.|+...+++|...++.
T Consensus 177 ---~~KF~~lLNeKK~KIR~lq~~Ll~~~~~ 204 (213)
T 1ik9_A 177 ---YKRFILVLNEKKTKIRSLHNKLLNAAQE 204 (213)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3478899999999999999999876543
No 60
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=27.39 E-value=56 Score=29.45 Aligned_cols=65 Identities=15% Similarity=0.250 Sum_probs=29.4
Q ss_pred ccccccCCcccccccccchhhhhccHHHHhhhHHHHHHHhhhhhhhHHHhhhhhhhhccchhhHHHHHHHHH
Q 002212 762 DNIEKVDHPQRNWNLGGKATELLKSEEEKTKLQTELKLCRERLGVVKREFEDLTKKSWKIDSDLQTVQMEIQ 833 (953)
Q Consensus 762 dn~~~~~~~~~~~~~~gka~~llk~ee~~~kl~~e~k~~~e~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 833 (953)
+.+..+|..-.-|..-|.+.=....++-...|. .. ...+..+|+.|.++..+++.++..++..++
T Consensus 44 ~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~----~~---~e~ie~~i~~le~~~~~l~~~l~~lk~~l~ 108 (117)
T 2zqm_A 44 DEIESLPDDAVVYKTVGTLIVKTTKDKAVAELK----EK---IETLEVRLNALERQEKKLNEKLKELTAQIQ 108 (117)
T ss_dssp HHHHTSCTTCCEEEEETTEEEEECHHHHHHHHH----HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHH----HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444556666676543322222222222 21 222345555555555555555555544443
No 61
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=27.37 E-value=1.3e+02 Score=29.04 Aligned_cols=42 Identities=21% Similarity=0.317 Sum_probs=20.0
Q ss_pred HHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhh
Q 002212 356 LRMQAIHNQAEMETLRKQLEFSLDEKEKLERHVSDLVKKLEE 397 (953)
Q Consensus 356 Lr~~~~~~~~El~~~~k~l~~clEen~kl~r~i~~L~~el~~ 397 (953)
|.-+++..+-+++...+++..-.+++..|++++.+|+.++..
T Consensus 94 lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~~ 135 (138)
T 3hnw_A 94 LKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELND 135 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444444444444444444444555555555555543
No 62
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=26.23 E-value=1.6e+02 Score=26.15 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 002212 249 AKQREDEIQGLKMRLRFREAGIKRLEAVA 277 (953)
Q Consensus 249 v~qREeeiqs~KM~LRfREdkI~rLE~l~ 277 (953)
.+++++.|..+...|..+++.|..|...+
T Consensus 35 Lr~kd~~I~eLEk~L~ekd~eI~~LqseL 63 (72)
T 3nmd_A 35 LRQRDALIDELELELDQKDELIQMLQNEL 63 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555555555444
No 63
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=25.73 E-value=1.7e+02 Score=26.89 Aligned_cols=38 Identities=24% Similarity=0.373 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHhhhHHHHHHHHhh
Q 002212 502 EMEMKREAENLELQLAEMNEENEKLLGLYEKAMQERDEFKRMISL 546 (953)
Q Consensus 502 ~~~~~~~~~~L~~ql~e~~~en~kl~~lye~am~e~d~~~r~~~~ 546 (953)
..+++.....|..+++.+..||..+. .|+|.+|.++..
T Consensus 50 ~~~LE~e~~~L~~e~~~L~~e~~~~~-------~e~d~~k~k~~~ 87 (90)
T 2wt7_B 50 KHHLENEKTQLIQQVEQLKQEVSRLA-------RERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 46777888888888888888888776 899999998743
No 64
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=25.06 E-value=4.5e+02 Score=25.00 Aligned_cols=66 Identities=23% Similarity=0.262 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHh--------
Q 002212 234 SLQALAAENQAALRLAKQREDEIQGLKMRLRFREA---GIKRLEAVASGKISAETHLLKEKEECLKEIESFY-------- 302 (953)
Q Consensus 234 ~LkkL~aEle~~~~Lv~qREeeiqs~KM~LRfREd---kI~rLE~l~~g~~sae~~Ll~Ene~L~eEIq~Lq-------- 302 (953)
.+..|.+.+..+...+..+..++..++..+.-++. .|..|++.+ .++
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv----------------------~IY~~DF~aER 82 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQA----------------------DIYKADFQAER 82 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH----------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHccch
Q ss_pred -----hhhhhhhHHHHHHHHHHHH
Q 002212 303 -----EGGEREMMSQQIMVLQNKL 321 (953)
Q Consensus 303 -----eegERE~lleeIs~Lqd~L 321 (953)
.++|.+.+.+++..||.++
T Consensus 83 adREkl~~eKe~L~~ql~~Lq~q~ 106 (110)
T 2v4h_A 83 HAREKLVEKKEYLQEQLEQLQREF 106 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhHHHHHHHHHHHHHHHH
No 65
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=22.54 E-value=2.9e+02 Score=25.20 Aligned_cols=65 Identities=20% Similarity=0.149 Sum_probs=0.0
Q ss_pred hHHHHHHHhhhhhhhHHHhhhhhhhhccchhhHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 002212 793 LQTELKLCRERLGVVKREFEDLTKKSWKIDSDLQTVQMEIQKSSRSVEEMELAHQAVLQEQEALL 857 (953)
Q Consensus 793 l~~e~k~~~e~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 857 (953)
++..+|.......-.-.||.+|++|...++.++..++..+......+++.+-.....=.+...|.
T Consensus 28 ~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~ 92 (101)
T 3u1c_A 28 AEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLN 92 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 66
>1z56_A Ligase interacting factor 1; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=22.54 E-value=47 Score=35.26 Aligned_cols=70 Identities=33% Similarity=0.473 Sum_probs=57.9
Q ss_pred HhhhhhhhHhhhhhHHHHHHhhhhhhHHhhHHHHhHHHHHhHHHhhhhhcccccchhhHHHHHHHhhhhccccchhhhhh
Q 002212 626 VDKLSGDIVAMEDSIQAKQQQCGSLKHLCSEMQERKALVDNKLMALKYSLSSFSSSAAYFEQRAARSRARVTTSSTYLNQ 705 (953)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (953)
++.|-..+-..-+.++....-...|+..+.++++.|...| +| -+-|-.+.|+.| ...||.
T Consensus 159 A~~L~q~i~~ln~k~~~~E~si~~L~~qLeElv~~k~~~d-qL----------------i~~RD~~tR~~f---v~LLNE 218 (246)
T 1z56_A 159 ADKLYKDICCVNDSYRNIKESDSSNRNRVEQLARERELLD-KL----------------LETRDERTRAMM---VTLLNE 218 (246)
T ss_dssp CTTSGGGTTHHHHHHHHTTTTTTHHHHHHHHTTTTHHHHH-HH----------------HHHTTTHHHHHH---HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----------------HHhhcchhHHHH---HHHHhH
Confidence 6777778888888888888889999999999999999999 77 355667777765 678999
Q ss_pred hHhhhHhHhH
Q 002212 706 KKEQLVHLEC 715 (953)
Q Consensus 706 k~~~l~~l~~ 715 (953)
||-....+|.
T Consensus 219 KK~KIR~qqr 228 (246)
T 1z56_A 219 KKKKIRELHE 228 (246)
T ss_dssp HHHHHHHGGG
T ss_pred HHHHHHHHHH
Confidence 9988877775
No 67
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=22.19 E-value=51 Score=29.32 Aligned_cols=66 Identities=15% Similarity=0.281 Sum_probs=34.8
Q ss_pred ccccccCCcccccccccchhhhhccHHHHhhhHHHHHHHhhhhhhhHHHhhhhhhhhccchhhHHHHHHHHHh
Q 002212 762 DNIEKVDHPQRNWNLGGKATELLKSEEEKTKLQTELKLCRERLGVVKREFEDLTKKSWKIDSDLQTVQMEIQK 834 (953)
Q Consensus 762 dn~~~~~~~~~~~~~~gka~~llk~ee~~~kl~~e~k~~~e~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 834 (953)
+.+..+|..-.-|..-|.+.=....++-...|.. +...+..+|+.|.++..+++.++..++..++.
T Consensus 39 ~EL~~l~~d~~vy~~iG~vfv~~~~~e~~~~L~~-------~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~~ 104 (107)
T 1fxk_A 39 EELSRAADDAEVYKSSGNILIRVAKDELTEELQE-------KLETLQLREKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp HHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCchHHHHHhHHHHhccHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555567777766433333333333322 22233466666666666666666666655543
No 68
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=22.02 E-value=4.2e+02 Score=23.62 Aligned_cols=79 Identities=22% Similarity=0.293 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHh-----hhhhhhhHHHHHHHHHHHHHHHhhHhhhccCCccccCCCCCCCcccchhhhHHHHHHHHhhH
Q 002212 290 EKEECLKEIESFY-----EGGEREMMSQQIMVLQNKLLEALDWKLMHESDSSAVQEPGSPWRTSVNEENEFLRMQAIHNQ 364 (953)
Q Consensus 290 Ene~L~eEIq~Lq-----eegERE~lleeIs~Lqd~Lle~ld~k~~~e~~~v~~~~~~~~~~~s~~~Ene~Lr~~~~~~~ 364 (953)
|-++|...|..+. ...|+..+...+..++.+.=+-+......|
T Consensus 1 Ei~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E-------------------------------- 48 (86)
T 3swk_A 1 EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAE-------------------------------- 48 (86)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
T ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhccC
Q 002212 365 AEMETLRKQLEFSLDEKEKLERHVSDLVKKLEEQTC 400 (953)
Q Consensus 365 ~El~~~~k~l~~clEen~kl~r~i~~L~~el~~~~~ 400 (953)
.++..++|-+..+.-.+.-|+++|+.|+.++.=.|+
T Consensus 49 ~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~fLkk 84 (86)
T 3swk_A 49 NTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKK 84 (86)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 69
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=20.74 E-value=6.9e+02 Score=25.55 Aligned_cols=119 Identities=16% Similarity=0.149 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHhhhh--hhhhHHHHHHHHHHHHHHHhhHhhhc
Q 002212 254 DEIQGLKMRLRFREAGIKRLEAVASGKISAETHLLKEKEECLKEIESFYEGG--EREMMSQQIMVLQNKLLEALDWKLMH 331 (953)
Q Consensus 254 eeiqs~KM~LRfREdkI~rLE~l~~g~~sae~~Ll~Ene~L~eEIq~Lqeeg--ERE~lleeIs~Lqd~Lle~ld~k~~~ 331 (953)
+++.+.+.+=..-+..|.++++.. ..|...+..|..|+..++..- =..-...+++.|++.+-..-..+...
T Consensus 35 EFqesSrELE~ELE~eL~~~Ek~~-------~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l 107 (189)
T 2v71_A 35 EFQEGSRELEAELEAQLVQAEQRN-------RDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQL 107 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555544444455566655544 456666666666666665111 11122224555555442221111000
Q ss_pred cCCccccCCCCCCCcccchhhhHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 002212 332 ESDSSAVQEPGSPWRTSVNEENEFLRMQAIHNQAEMETLRKQLEFSLDEKEKLERHVSD 390 (953)
Q Consensus 332 e~~~v~~~~~~~~~~~s~~~Ene~Lr~~~~~~~~El~~~~k~l~~clEen~kl~r~i~~ 390 (953)
-.. ...+--.|+-|--..-.+..=++++.++++.-+|.|+-|+-+++.
T Consensus 108 ~~~-----------ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~E 155 (189)
T 2v71_A 108 HKY-----------VRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDE 155 (189)
T ss_dssp HHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-----------HHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 011222333444344456666888889999999999999999885
Done!